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Sample records for product cation partitioning

  1. Electron Transfer Dissociation: Effects of Cation Charge State on Product Partitioning in Ion/Ion Electron Transfer to Multiply Protonated Polypeptides

    PubMed Central

    Liu, Jian; McLuckey, Scott A.

    2012-01-01

    The effect of cation charge state on product partitioning in the gas-phase ion/ion electron transfer reactions of multiply protonated tryptic peptides, model peptides, and relatively large peptides with singly charged radical anions has been examined. In particular, partitioning into various competing channels, such as proton transfer (PT) versus electron transfer (ET), electron transfer with subsequent dissociation (ETD) versus electron transfer with no dissociation (ET,noD), and fragmentation of backbone bonds versus fragmentation of side chains, was measured quantitatively as a function of peptide charge state to allow insights to be drawn about the fundamental aspects of ion/ion reactions that lead to ETD. The ET channel increases relative to the PT channel, ETD increases relative to ET,noD, and fragmentation at backbone bonds increases relative to side-chain cleavages as cation charge state increases. The increase in ET versus PT with charge state is consistent with a Landau-Zener based curve-crossing model. An optimum charge state for ET is predicted by the model for the ground state-to-ground state reaction. However, when the population of excited product ion states is considered, it is possible that a decrease in ET efficiency as charge state increases will not be observed due to the possibility of the population of excited electronic states of the products. Several factors can contribute to the increase in ETD versus ET,noD and backbone cleavage versus side-chain losses. These factors include an increase in reaction exothermicity and charge state dependent differences in precursor and product ion structures, stabilities, and sites of protonation. PMID:23264749

  2. Electron Transfer Dissociation: Effects of Cation Charge State on Product Partitioning in Ion/Ion Electron Transfer to Multiply Protonated Polypeptides.

    PubMed

    Liu, Jian; McLuckey, Scott A

    2012-12-15

    The effect of cation charge state on product partitioning in the gas-phase ion/ion electron transfer reactions of multiply protonated tryptic peptides, model peptides, and relatively large peptides with singly charged radical anions has been examined. In particular, partitioning into various competing channels, such as proton transfer (PT) versus electron transfer (ET), electron transfer with subsequent dissociation (ETD) versus electron transfer with no dissociation (ET,noD), and fragmentation of backbone bonds versus fragmentation of side chains, was measured quantitatively as a function of peptide charge state to allow insights to be drawn about the fundamental aspects of ion/ion reactions that lead to ETD. The ET channel increases relative to the PT channel, ETD increases relative to ET,noD, and fragmentation at backbone bonds increases relative to side-chain cleavages as cation charge state increases. The increase in ET versus PT with charge state is consistent with a Landau-Zener based curve-crossing model. An optimum charge state for ET is predicted by the model for the ground state-to-ground state reaction. However, when the population of excited product ion states is considered, it is possible that a decrease in ET efficiency as charge state increases will not be observed due to the possibility of the population of excited electronic states of the products. Several factors can contribute to the increase in ETD versus ET,noD and backbone cleavage versus side-chain losses. These factors include an increase in reaction exothermicity and charge state dependent differences in precursor and product ion structures, stabilities, and sites of protonation. PMID:23264749

  3. CATION TRANSPORT AND PARTITIONING DURING A FIELD TEST OF ELECTROOSMOSIS

    EPA Science Inventory

    Field experiments were conducted to evaluate the effects of soil properties, such as the cation exchange capacity and mineral content, on pH, soluble ion concentrations, and electrical conductivity during electroosmosis in a silty clay soil. The soil is composed mainly of quartz ...

  4. Modeling the selective partitioning of cations into negatively charged nanopores in water

    NASA Astrophysics Data System (ADS)

    Yang, Lu; Garde, Shekhar

    2007-02-01

    Partitioning and transport of water and small solutes into and through nanopores are important to a variety of chemical and biological processes and applications. Here we study water structure in negatively charged model cylindrical [carbon nanotube (CNT)-like] nanopores, as well as the partitioning of positive ions of increasing size (Na+, K+, and Cs+) into the pore interior using extensive molecular dynamics simulations. Despite the simplicity of the simulation system—containing a short CNT-like nanopore in water carrying a uniformly distributed charge of qpore=-ne surrounded by n (=0,…,8) cations, making the overall system charge neutral—the results provide new and useful insights on both the pore hydration and ion partitioning. For n =0, that is, for a neutral nanopore, water molecules partition into the pore and form single-file hydrogen-bonded wire spanning the pore length. With increasing n, water molecules enter the pore from both ends with preferred orientations, resulting in a mutual repulsion between oriented water molecules at the pore center and creating a cavity-like low density region at the center. For low negative charge densities on the pore, the driving force for partitioning of positive ions into the pore is weak, and no partitioning is observed. Increasing the pore charge gradually leads to partitioning of positive ions into the pore. Interestingly, over a range of intermediate negative charge densities, nanopores display both thermodynamic as well as kinetic selectivity toward partitioning of the larger K+ and Cs+ ions into their interior over the smaller Na+ ions. Specifically, the driving force is in the order K+>Cs+>Na+, and K+ and Cs+ ions enter the pore much more rapidly than Na+ ions. At higher charge densities, the driving force for partitioning increases for all cations—it is highest for K+ ions—and becomes similar for Na+ and Cs+ ions. The variation of thermodynamic driving force and the average partitioning time with the

  5. Soil particle-size dependent partitioning behavior of pesticides within water-soil-cationic surfactant systems.

    PubMed

    Wang, Peng; Keller, Arturo A

    2008-08-01

    Cationic surfactants have been proposed for enhanced sorption zones to contain hydrophobic organic compound (HOC) contamination. Benzalkonium chloride (BC), a cationic surfactant, was selected to study the particle-size dependent sorption behavior of the surfactant and its role in the immobilization of two hydrophobic pesticides (atrazine and diuron) within soil-water-surfactant systems for this application. Five different soils were considered in this study. Our results showed significant particle-size dependent behavior for surfactant sorption and pesticide immobilization in the presence of the sorbed cationic surfactant. The cation exchange capacity (CEC) of the bulk soils and their size fractions (clay, silt, and sand fractions) determined BC sorption capacity. In the absence of BC the sand fractions were the least effective sorbent for the pesticides compared with silts and clays. However, at relatively low BC mass sorbed (<10,000mg/kg) to any of the soil fractions, well below sorption saturation, the sand fractions became more effective sorbents for either pesticide than the clay and silt fractions. The pesticide partitioning coefficient onto sorbed BC (K(ss)) was not constant. Particle CEC, availability of CEC sites for sorption of the cationic surfactant, and the amount of the BC sorbed determined the phase of K(ss). The maximum K(ss) occurred before BC saturation sorption capacity was reached and at different % CEC occupancy for the different size fractions. For the clay fractions, the maximum K(ss) occurred at lower % CEC occupancy ( approximately 30-40%) than for the silt and sand fractions. The maximal K(ss) for the sand fractions occurred at the highest % CEC occupancy among all fractions ( approximately 50-60%). These findings suggest that for an in situ surfactant-enhanced sorption zone it may be better to operate well below the saturation sorption of the cationic surfactant. This would enhance sorption of the HOCs onto the immobile fractions (silt

  6. Time Domain Partitioning of Electricity Production Cost Simulations

    SciTech Connect

    Barrows, C.; Hummon, M.; Jones, W.; Hale, E.

    2014-01-01

    Production cost models are often used for planning by simulating power system operations over long time horizons. The simulation of a day-ahead energy market can take several weeks to compute. Tractability improvements are often made through model simplifications, such as: reductions in transmission modeling detail, relaxation of commitment variable integrality, reductions in cost modeling detail, etc. One common simplification is to partition the simulation horizon so that weekly or monthly horizons can be simulated in parallel. However, horizon partitions are often executed with overlap periods of arbitrary and sometimes zero length. We calculate the time domain persistence of historical unit commitment decisions to inform time domain partitioning of production cost models. The results are implemented using PLEXOS production cost modeling software in an HPC environment to improve the computation time of simulations while maintaining solution integrity.

  7. Umbrella motion of the methyl cation, radical, and anion molecules. I. Potentials, energy levels and partition functions

    NASA Astrophysics Data System (ADS)

    Ragni, Mirco; Bitencourt, Ana Carla P.; Prudente, Frederico V.; Barreto, Patricia R. P.; Posati, Tamara

    2016-03-01

    A study of the umbrella motion of the methyl cation, radical, and anion molecules is presented. This is the floppiest mode of vibration of all three species and its characterization is of fundamental importance for understanding their reactivity. Minimum Energy Paths of the umbrella motions according to the hyperspherical treatment were obtained, by single point calculations, at the CCSD(T)/aug-cc-pVQT level of theory in the Born-Oppenheimer approximation. These energy profiles permit us to calculate the vibrational levels through the Hyperquantization algorithm, which is shown appropriated for the description of the umbrella motion of these three molecules. The adiabatic electron affinity and ionization potentials were estimated to good accuracy. Partition functions are also calculated in order to obtain information on the reaction rates involving these groups.

  8. Generalized Enhanced Multivariance Product Representation for Data Partitioning: Constancy Level

    SciTech Connect

    Tunga, M. Alper; Demiralp, Metin

    2011-09-14

    Enhanced Multivariance Product Representation (EMPR) method is used to represent multivariate functions in terms of less-variate structures. The EMPR method extends the HDMR expansion by inserting some additional support functions to increase the quality of the approximants obtained for dominantly or purely multiplicative analytical structures. This work aims to develop the generalized form of the EMPR method to be used in multivariate data partitioning approaches. For this purpose, the Generalized HDMR philosophy is taken into consideration to construct the details of the Generalized EMPR at constancy level as the introductory steps and encouraging results are obtained in data partitioning problems by using our new method. In addition, to examine this performance, a number of numerical implementations with concluding remarks are given at the end of this paper.

  9. Cationic vinyl pyridine copolymers and products thereof

    NASA Technical Reports Server (NTRS)

    Rembaum, Alan (Inventor)

    1978-01-01

    Quaternized, cross-linked, insoluble copolymers of unsubstituted and substituted vinyl pyridines and a dihalo organic compound are spontaneously formed at ambient temperature on mixing the two monomers in bulk, in solution or in suspension. The amount of cross-linking may be varied according to the composition and reaction conditions. The polymer product exhibits ion exchange capacity and undergoes a reversible color change from black at a pH above 7 to yellow at a pH below 7. The polymer may be formed in the presence of preformed polymers, substrates such as porous or impervious particles or films to deposit an ion exchange film in situ or on the surface of the substrate. The coated or resin impregnated substrate may be utilized for separation of anionic species from aqueous solution.

  10. A Product Partition Model With Regression on Covariates

    PubMed Central

    Müller, Peter; Quintana, Fernando; Rosner, Gary L.

    2011-01-01

    We propose a probability model for random partitions in the presence of covariates. In other words, we develop a model-based clustering algorithm that exploits available covariates. The motivating application is predicting time to progression for patients in a breast cancer trial. We proceed by reporting a weighted average of the responses of clusters of earlier patients. The weights should be determined by the similarity of the new patient’s covariate with the covariates of patients in each cluster. We achieve the desired inference by defining a random partition model that includes a regression on covariates. Patients with similar covariates are a priori more likely to be clustered together. Posterior predictive inference in this model formalizes the desired prediction. We build on product partition models (PPM). We define an extension of the PPM to include a regression on covariates by including in the cohesion function a new factor that increases the probability of experimental units with similar covariates to be included in the same cluster. We discuss implementations suitable for any combination of continuous, categorical, count, and ordinal covariates. An implementation of the proposed model as R-package is available for download. PMID:21566678

  11. Formation of (Cr, Al)UO4 from doped UO2 and its influence on partition of soluble fission products

    NASA Astrophysics Data System (ADS)

    Cooper, M. W. D.; Gregg, D. J.; Zhang, Y.; Thorogood, G. J.; Lumpkin, G. R.; Grimes, R. W.; Middleburgh, S. C.

    2013-11-01

    CrUO4 and (Cr, Al)UO4 have been fabricated by a sol-gel method, studied using diffraction techniques and modelled using empirical pair potentials. Cr2O3 was predicted to preferentially form CrUO4 over entering solution into hyper-stoichiometric UO2+x by atomic scale simulation. Further, it was predicted that the formation of CrUO4 can proceed by removing excess oxygen from the UO2 lattice. Attempts to synthesise AlUO4 failed, instead forming U3O8 and Al2O3. X-ray diffraction confirmed the structure of CrUO4 and identifies the existence of a (Cr, Al)UO4 phase for the first time (with a maximum Al to Cr mole ratio of 1:3). Simulation was subsequently used to predict the partition energies for the removal of fission products or fuel additives from hyper-stoichiometric UO2+x and their incorporation into the secondary phase. The partition energies are consistent only with smaller cations (e.g. Zr4+, Mo4+ and Fe3+) residing in CrUO4, while all divalent cations are predicted to remain in UO2+x. Additions of Al had little effect on partition behaviour. The reduction of UO2+x due to the formation of CrUO4 has important implications for the solution limits of other fission products as many species are less soluble in UO2 than UO2+x.

  12. Process and apparatus for the production of Bi-213 cations

    DOEpatents

    Horwitz, E.P.; Hines, J.J.; Chiarizia, R.; Dietz, M.

    1998-12-29

    A process for producing substantially impurity-free Bi-213 cations is disclosed. An aqueous acid feed solution containing Ac-225 cations is contacted with an ion exchange medium to bind the Ac-225 cations and form an Ac-225-laden ion exchange medium. The bound Ac-225 incubates on the ion exchange medium to form Bi-213 cations by radioactive decay. The Bi-213 cations are then recovered from the Ac-225-laden ion exchange medium to form a substantially impurity-free aqueous Bi-213 cation acid solution. An apparatus for carrying out this process is also disclosed. 7 figs.

  13. Process and apparatus for the production of BI-213 cations

    DOEpatents

    Horwitz, E. Philip; Hines, John J.; Chiarizia, Renato; Dietz, Mark

    1998-01-01

    A process for producing substantially impurity-free Bi-213 cations is disclosed. An aqueous acid feed solution containing Ac-225 cations is contacted with an ion exchange medium to bind the Ac-225 cations and form an Ac-225-laden ion exchange medium. The bound Ac-225 incubates on the ion exchange medium to form Bi-213 cations by radioactive decay. The Bi-213 cations are then recovered from the Ac-225-laden ion exchange medium to form a substantially impurity-free aqueous Bi-213 cation acid solution. An apparatus for carrying out this process is also disclosed.

  14. The role of branch architecture in assimilate production and partitioning: the example of apple (Malus domestica)

    PubMed Central

    Fanwoua, Julienne; Bairam, Emna; Delaire, Mickael; Buck-Sorlin, Gerhard

    2014-01-01

    Understanding the role of branch architecture in carbon production and allocation is essential to gain more insight into the complex process of assimilate partitioning in fruit trees. This mini review reports on the current knowledge of the role of branch architecture in carbohydrate production and partitioning in apple. The first-order carrier branch of apple illustrates the complexity of branch structure emerging from bud activity events and encountered in many fruit trees. Branch architecture influences carbon production by determining leaf exposure to light and by affecting leaf internal characteristics related to leaf photosynthetic capacity. The dynamics of assimilate partitioning between branch organs depends on the stage of development of sources and sinks. The sink strength of various branch organs and their relative positioning on the branch also affect partitioning. Vascular connections between branch organs determine major pathways for branch assimilate transport. We propose directions for employing a modeling approach to further elucidate the role of branch architecture on assimilate partitioning. PMID:25071813

  15. Trace Element Partitioning under Crustal and Uppermost Mantle Conditions: The Influences of Ionic Radius, Cation Charge, Pressure, and Temperature

    NASA Astrophysics Data System (ADS)

    Wood, B. J.; Blundy, J. D.

    2003-12-01

    The controls on partitioning of trace elements between crystals and silicate melts were initially the subject of crystal-chemical, rather than petrogenetic interest. Goldschmidt (1937) systematized his observations of elemental concentrations in minerals as a means of understanding and predicting element behavior during crystallization from liquids or gases. Thus, he proposed his three "rules" of element partitioning, which may be summarized as follows: (i) Any two ions of the same charge and very similar ionic radius have essentially the same crystal-liquid partition coefficient (D=[i]xtl/[i]liq, where [i] refers to the concentration of element i). (ii) If there is a small difference of ionic radius, the smaller ion enters the crystal preferentially, e.g., DMg2+>DFe2+, DK+>DRb+>DCs+. (iii) For ions of similar radius but different charges, the ion with the higher charge enters the crystal preferentially, i.e., DSc3+>DMg2+>DLi+, DCa2+>DNa+, and DBa2+>DK+. These principles were taught to generations of students and, as we will show below, under certain circumstances, retain a degree of validity. They are neither, however, universally correct nor do they have any quantitative applicability. The aim of this chapter is to summarize the ways in which Goldschmidt's work has been amplified through a combination of theory and experimental measurement in order to quantify crystal-liquid partitioning behavior.Since the development of accurate methods of determining element concentration at the ppm level, the trace-element contents of igneous rocks have frequently been used to model their chemical evolution. These studies use estimated crystal-liquid partition coefficients together with solutions for the differential equations describing, e.g., fractional crystallization or fractional melting (Schilling and Winchester, 1967; Gast, 1968; Shaw, 1970) to model evolution of the melt during precipitation or dissolution of the crystalline phases. Generally, because of lack of data

  16. Analytical modeling of degradation product partitioning kinetics in source zones containing entrapped DNAPL

    NASA Astrophysics Data System (ADS)

    Ramsburg, C. Andrew; Christ, John A.; Douglas, Scott R.; Boroumand, Ali

    2011-03-01

    Liquid-liquid equilibrium experiments indicate that there is a strong thermodynamic driving force for the reversible sequestration of cis-dichloroethene (DCE) within microbially active dense nonaqueous phase liquid (DNAPL) source zones containing chlorinated ethene solvents. Assessment of the importance of degradation product sequestration, however, requires accurate description of the mass transfer kinetics. Partitioning kinetics of cis-DCE were assessed in a series of transport experiments conducted in sandy columns containing uniformly entrapped tetrachloroethene (PCE)-nonaqueous phase liquids (NAPL). Effluent data from these experiments were simulated using an analytical solution adapted from the sorption literature. The solution permits interrogation of the relative importance of mass transfer resistance in the aqueous phase and NAPL. Column data and simulations suggest that the kinetic exchange of cis-DCE may be described with mass transfer correlations developed for the dissolution of pure component NAPLs. Diffusive transport within the entrapped ganglia was relatively fast, offering limited resistance to mass exchange. These results (1) establish the applicability of dissolution-based mass transfer correlations for modeling both absorption and dissolution of degradation products, (2) quantify the thermodynamic driving force for the partitioning of cis-DCE in PCE-NAPL by assessing the ternary phase behavior, and (3) guide incorporation and deployment of partitioning kinetics into multiphase compositional simulators when assessing or designing metabolic reductive dechlorination within DNAPL source zones. While focus is placed on examining degradation product partitioning in DNAPL source zones, results may also be useful when considering rate limitations in other liquid-liquid partitioning processes, such as partitioning tracer tests.

  17. Inner products of Bethe states as partial domain wall partition functions

    NASA Astrophysics Data System (ADS)

    Kostov, Ivan; Matsuo, Yutaka

    2012-10-01

    We study the inner product of Bethe states in the inhomogeneous periodic XXX spin-1/2 chain of length L, which is given by the Slavnov determinant formula. We show that the inner product of an on-shell M -magnon state with a generic M -magnon state is given by the same expression as the inner product of a 2 M -magnon state with a vacuum descendent. The second inner product is proportional to the partition function of the six-vertex model on a rectangular L × 2 M grid, with partial domain-wall boundary conditions.

  18. Product energy distributions and energy partitioning in O atom reactions on surfaces

    NASA Technical Reports Server (NTRS)

    Halpern, Bret; Kori, Moris

    1987-01-01

    Surface reactions involving O atoms are likely to be highly exoergic, with different consequences if energy is channeled mostly to product molecules or surface modes. Thus the surface may become a source of excited species which can react elsewhere, or a sink for localized heat deposition which may disrupt the surface. The vibrational energy distribution of the product molecule contains strong clues about the flow of released energy. Two instructive examples of energy partitioning at surfaces are the Pt catalyzed oxidations: (1) C(ads) + O(ads) yields CO* (T is greater than 1000 K); and (2) CO(ads) + O(gas) yields CO2* (T is approx. 300 K). The infrared emission spectra of the excited product molecules were recorded and the vibrational population distributions were determined. In reaction 1, energy appeared to be statistically partitioned between the product CO and several Pt atoms. In reaction 2, partitioning was non-statistical; the CO2 asymmetric stretch distribution was inverted. In gas reactions these results would indicate a long lived and short lived activated complex. The requirement that Pt be heated in O atoms to promote reaction of atomic O and CO at room temperature is specifically addressed. Finally, the fraction of released energy that is deposited in the catalyst is estimated.

  19. Enhancement of soil retention for phenanthrene in binary cationic gemini and nonionic surfactant mixtures: characterizing two-step adsorption and partition processes through experimental and modeling approaches.

    PubMed

    Zhao, Shan; Huang, Gordon; An, Chunjiang; Wei, Jia; Yao, Yao

    2015-04-01

    The enhancement of soil retention for phenanthrene (PHE) through the addition of a binary mixture of cationic gemini (12-2-12) and nonionic surfactants (C12E10) was investigated. The maximum apparent sorption coefficient Kd(*) reached 4247.8 mL/g through the addition of mixed 12-2-12 gemini and C12E10 surfactants, which was markedly higher than the summed individual results in the presence of individual 12-2-12 gemini (1148.6 mL/g) or C12E10 (210.0 mL/g) surfactant. However, the sorption of 12-2-12 gemini was inhibited by the increasing C12E10 dose; and a higher initial 12-2-12 gemini dose showed a higher "desorption" rate. The present study also addressed the sorption behavior of the single 12-2-12 gemini surfactant at the soil/aqueous interface. The sorption isotherm was divided into two steps to elucidate the sorption process; and the sorption schematics were proposed to elaborate the growth of surfactant aggregates corresponding to the various steps of the sorption isotherm. Finally, a two-step adsorption and partition model (TAPM) was developed to simulate the sorption process. Analysis of the equilibrium data indicated that the sorption isotherms of 12-2-12 gemini fitted the TAPM model better. Thermodynamic calculations confirmed that the 12-2-12 gemini sorption at the soil/aqueous interface was spontaneous and exothermic from 288 to 308K. PMID:25576782

  20. Lab-scale Investigation of Degradation Product Partitioning in Source Zones Containing Chlorinated Solvents

    NASA Astrophysics Data System (ADS)

    Ramsburg, C. A.; Christ, J. A.; Abriola, L. M.

    2005-12-01

    Recent trends in source-zone remediation technology development and implementation suggest in situ transformation or destruction mechanisms are becoming increasingly attractive relative to recovery mechanisms for treatment of dense nonaqueous phase liquids (DNAPLs). Processes such as bioaugmentation and the injection of zero valent iron rely upon the reductive dechlorination to transform tetrachloroethene (PCE) and trichloroethene (TCE) emanating from entrapped or pooled DNAPL. These processes typically produce a suite of degradation products which may include cis-dichloroethene (cis-DCE). When production of these degradation products is slow relative to DNAPL mass reduction there is potential for significant redistribution among all phases present in the source zone (solid, aqueous, and DNAPL). While several studies have examined mass transfer in DNAPL source zones, nearly all have focused on dissolution or solubilization processes (i.e., exchange from the organic phase). In situ production of degradation product species in the aqueous phase, however, requires that conceptual models of mass transfer consider both the exchange to and from the organic phase. This study investigates the partitioning of cis-DCE from the aqueous phase into a PCE-DNAPL in an abiotic source zone. Liquid-liquid equilibrium experiments were employed to determine the distribution of cis-DCE between the aqueous and organic phases. One-dimensional column experiments were conducted to elucidate partitioning kinetics under conditions of flow through a DNAPL source zone. Results indicate that the equilibrium distribution of cis-DCE favors the organic phase, creating a significant capacity for retention of degradation products. While retention in flowing systems was reduced by mass transfer limitations, these results may have significant implications for calculation of dissolution enhancement factors during source zone treatment. Current efforts are focused on incorporating partitioning kinetics

  1. Partitioning of Evapotranspiration Using a Stable Water Isotope Technique in a High Temperature Agricultural Production System

    NASA Astrophysics Data System (ADS)

    Lu, X.; Liang, L.; Wang, L.; Jenerette, D.; Grantz, D. A.

    2015-12-01

    Agricultural production in the hot and arid low desert systems of southern California relies heavily on irrigation. A better understanding of how much and to what extent the irrigation water is transpired by crops relative to being lost through evaporation will contribute to better management of increasingly limited agricultural water resources. In this study, we examined the evapotranspiration (ET) partitioning over a field of forage sorghum (S. bicolor) during a growing season with several irrigation cycles. In several field campaigns we used continuous measurements of near-surface variations in the stable isotopic composition of water vapor (δ2H). We employed custom built transparent chambers coupled with a laser-based isotope analyzer and used Keeling plot and mass balance methods for surface flux partitioning. The preliminary results show that δT is more enriched than δE in the early growing season, and becomes less enriched than δE later in the season as canopy cover increases. There is an increase in the contribution of transpiration to ET as (1) leaf area index increases, and (2) as soil surface moisture declines. These results are consistent with theory, and extend these measurements to an environment that experiences extreme soil surface temperatures. The data further support the use of chamber based methods with stable isotopic analysis for characterization of ET partitioning in challenging field environments.

  2. Partitioned EDGE devices for high throughput production of monodisperse emulsion droplets with two distinct sizes.

    PubMed

    Sahin, Sami; Schroën, Karin

    2015-06-01

    We present a novel microfluidic EDGE (Edge based Droplet GEneration) device with regularly spaced micron-sized partitions, which is aimed at upscaling of o/w emulsion preparation. By this means, remarkably higher pressure stability was obtained, and two orders of magnitude higher droplet formation frequency was achieved compared to regular EDGE devices. Interestingly, we observed two different monodisperse droplet formation regimes for plateaus that were 2 micrometres in height, and to the best of our knowledge, no other microfluidic device has this ability. The average diameters of the droplets were 9 and 28 μm, both with a coefficient of variation (CV) below 5%. Based on the experimental throughput and a plausible mass parallelization scenario, the amount of hexadecane that can be emulsified is estimated to be between 6 and 25 m(3) m(-2) h(-1) depending on the required droplet size. With its high throughput potential and ability to produce uniform droplets of two different sizes, the partitioned EDGE device is promising for industrial emulsion production. PMID:25953515

  3. Pullulan Production by Aureobasidium pullulans ATCC 201253 Cells Adsorbed onto Cellulose Anion and Cation Exchangers

    PubMed Central

    West, Thomas P.

    2012-01-01

    The anion exchanger phosphocellulose and the cation exchanger triethylaminoethyl cellulose were used to immobilize cells of the fungus Aureobasidium pullulans ATCC 201253 and the adsorbed cells were subsequently investigated for their ability to produce the polysaccharide pullulan using batch fermentation. The cells adsorbed on the triethylaminoethyl cellulose at pH 7.5 produced higher pullulan levels than those cells immobilized on phosphocellulose at pH 4.0 for 2 cycles of 168 h at 30 °C. Relative to the initial cycle of 168 h, pullulan production by the cells immobilized on the triethylaminoethyl cellulose decreased slightly after 168 h of the second production cycle while pullulan production by the phosphocellulose-immobilized cells remained about the same after 168 h of the second production cycle. PMID:23762749

  4. Asymmetric partitioning of metals among cluster anions and cations generated via laser ablation of mixed aluminum/Group 6 transition metal targets.

    PubMed

    Waller, Sarah E; Mann, Jennifer E; Jarrold, Caroline Chick

    2013-02-28

    While high-power laser ablation of metal alloys indiscriminately produces gas-phase atomic ions in proportion to the abundance of the various metals in the alloy, gas-phase ions produced by moderate-power laser ablation sources coupled with molecular beams are formed by more complicated mechanisms. A mass spectrometric study that directly compares the mass distributions of cluster anions and cations generated from laser ablation of pure aluminum, an aluminum/molybdenum mixed target, and an aluminum/tungsten mixed target is detailed. Mass spectra of anionic species generated from the mixed targets showed that both tungsten and molybdenum were in higher abundance in the negatively charged species than in the target material. Mass spectra of the cationic species showed primarily Al(+) and aluminum oxide and hydroxide cluster cations. No molybdenum- or tungsten-containing cluster cations were definitively assigned. The asymmetric distribution of aluminum and Group 6 transition metals in cation and anion cluster composition is attributed to the low ionization energy of atomic aluminum and aluminum suboxide clusters. In addition, the propensity of both molybdenum and tungsten to form metal oxide cluster anions under the same conditions that favor metallic aluminum cluster anions is attributed to differences in the optical properties of the surface oxide that is present in the metal powders used to prepare the ablation targets. Mechanisms of mixed metal oxide clusters are considered. PMID:23413829

  5. Partition coefficients of substrates and products and solvent selection for biocatalysis under nearly anhydrous conditions

    SciTech Connect

    Yang, Zhen; Robb, D.A. . Dept. of Bioscience and Biotechnology)

    1994-03-05

    The effect of solvent on the activity of mushroom tyrosinase toward three substrates was studied at a constant water activity of either 0.74 or 0.86. No simple correlation was observed between enzyme activity and log P, but partition coefficients of substrate (P[sub s]) and product (P[sub p]) gave systematic relations with enzyme activity. When initial reaction rates were considered, there was a bell-shaped relationship between enzyme and P[sub s] with an optimal P[sub s] for each substrate. This can be explained by assuming that the solvent affected the enzyme activity primarily by affecting the substrate concentration in the aqueous layer around the catalyst where the enzymic reaction occurs. When long-term reaction rates were considered, a high P[sub p]/P[sub s] ratio was consistent with preservation of enzyme activity.

  6. Effects of partly replacing dietary starch with fiber and fat on milk production and energy partitioning.

    PubMed

    Boerman, J P; Potts, S B; VandeHaar, M J; Lock, A L

    2015-10-01

    The effects of partly replacing dietary starch with fiber and fat to provide a diet with similar net energy for lactation (NEL) density on yields of milk and milk components and on energy partitioning were evaluated in a crossover design experiment. Holstein cows (n = 32; 109 ± 22 d in milk, mean ± standard deviation) were randomly assigned to treatment sequence. Treatments were a high-starch diet containing 33% corn grain (mixture of dry ground and high-moisture corn; HS) or a high-fiber, high-fat diet containing 2.5% palmitic acid-enriched fatty acid (FA) supplement (HFF). Diets contained corn silage, alfalfa silage, and wheat straw as forage sources; HS contained 32% starch, 3.2% FA, and 25% neutral detergent fiber, whereas HFF contained 16% starch, 5.4% FA, and 33% neutral detergent fiber. Compared with HS, the HFF treatment reduced milk yield, milk protein concentration, and milk protein yield, but increased milk fat concentration, milk fat yield, milk energy output, and milk to feed ratio (energy-corrected milk/dry matter intake). The HFF treatment reduced the yield of de novo synthesized (< 16-carbon) milk FA and increased the yield of 16-carbon milk FA. Yield of preformed (> 16-carbon) milk FA was not different. The HFF treatment increased plasma concentrations of triglycerides and nonesterified fatty acids, but decreased plasma concentration of insulin. Compared with HS, the HFF treatment reduced body weight gain, change in body condition score, and fat thickness over the rump and rib. Calculated body energy gain, as a fraction of NEL use, was less for HFF than HS, whereas milk energy as a fraction of NEL use was increased for HFF. We concluded that the 2 treatments resulted in similar apparent NEL densities and intakes, but the HS treatment partitioned more energy toward body gain whereas the HFF treatment partitioned more energy toward milk. A high-fiber, high-fat diet might diminish the incidence of over conditioning in mid-lactation cows while

  7. Phytoplankton succession explains size-partitioning of new production following upwelling-induced blooms

    NASA Astrophysics Data System (ADS)

    Van Oostende, N.; Dunne, J. P.; Fawcett, S. E.; Ward, B. B.

    2015-08-01

    Large and chain-forming diatoms typically dominate the phytoplankton biomass after initiation of coastal upwelling. The ability of these diatoms to accelerate and maintain elevated nitrate uptake rates has been proposed to explain the dominance of diatoms over all other phytoplankton groups. Moreover, the observed delay in biomass accumulation following nitrate supply after initiation of upwelling events has been hypothesised to result from changes in the diatom community structure or from physiological acclimation. To investigate these mechanisms, we used both numerical modelling and experimental incubations that reproduced the characteristic succession from small to large species in phytoplankton community composition and size structure. Using the Tracers Of Phytoplankton with Allometric Zooplankton (TOPAZ) ecosystem model as a framework, we find that variations in functional group-specific traits must be taken into account, through adjustments of group-dependent maximum production rates (PCmax, s- 1), in order to accurately reproduce the observed patterns and timescales of size-partitioned new production in a non-steady state environment. Representation of neither nutrient acclimation, nor diatom diversity in the model was necessary as long as lower than theoretical maximum production rates were implemented. We conclude that this physiological feature, PCmax, is critical in representing the early, relatively higher specific nitrate uptake rate of large diatoms, and explains the differential success of small and large phytoplankton communities in response to nitrate supply during upwelling.

  8. Production of cationic xylan-METAC copolymer as a flocculant for textile industry.

    PubMed

    Wang, Shoujuan; Hou, Qingxi; Kong, Fangong; Fatehi, Pedram

    2015-06-25

    Xylan is a part of hemicelluloses of woody materials and can be converted to value-added products such as flocculants for the textile industry. To assess the production of flocculants from hemicelluloses of woody materials, xylan was selected as a model and rendered cationic via copolymerization. In this study, the copolymerization reaction of xylan and [2-(methacryloyloxy) ethyl] trimethylammonium chloride (METAC) was optimized. The optimum parameters were 3mol/mol METAC/xylose, 3h reaction time, 80°C reaction temperature, pH 7 and 25g/L xylan concentration. The copolymer was characterized by a charge density analyzer, viscometer, gel permeation chromatography (GPC), light scattering instrument, Fourier transform infrared spectroscopy (FTIR) and an elemental analyzer. The application of the cationic xylan copolymer as a flocculant to decolorize the simulated reactive orange 16 azo-dye wastewater was evaluated. The results confirmed that, by having 160mg/L xylan-METAC concentration in the dye solution with the concentration of 100mg/L, 97.8% of dye could be removed. PMID:25839816

  9. The effect of dietary cation-anion difference concentration and cation source on milk production and feed efficiency in lactating dairy cows.

    PubMed

    Iwaniuk, M E; Weidman, A E; Erdman, R A

    2015-03-01

    Feed costs currently account for 55% or more of the total cost of milk production in US dairy herds, and dairy producers are looking for strategies to improve feed efficiency [FE; 3.5% fat-corrected milk (FCM) per dry matter (DM) intake]. Increasing dietary cation-anion difference [DCAD; Na+K-Cl (mEq/kg of DM)] has been shown to increase milk production, FCM, and FE. However, the optimal DCAD concentration for maximal FE has yet to be determined. The objectives of this research were to test the effects of DCAD concentration and cation source on dairy FE. Sixty Holstein dairy cows (20 cows per experiment) were used in three 4×4 Latin square design experiments with 3-wk experimental periods. In experiments 1 and 2, we tested the effect of DCAD concentration: cows were fed a basal diet containing ~250 mEq/kg of DM DCAD that was supplemented with potassium carbonate at 0, 50, 100, and 150 mEq/kg of DM or 0, 125, 250, and 375 mEq/kg of DM in experiments 1 and 2, respectively. In experiment 3, we tested the effect of cation source: sodium sesquicarbonate replaced 0, 33, 67, and 100% of the supplemental potassium carbonate (150 mEq/kg of DM DCAD). The DCAD concentration had no effect on milk production, milk protein concentration, or milk protein yield in experiments 1 and 2. Dry matter intake was not affected by DCAD concentration in experiment 1 or by cation source in experiment 3. However, DMI increased linearly with increasing DCAD in experiment 2. We detected a linear increase in milk fat concentration and yield with increasing DCAD in experiments 1 and 2 and by substituting sodium sesquicarbonate for potassium carbonate in experiment 3. Increased milk fat concentration with increasing DCAD led to increases in 3.5% FCM in experiments 1 and 2. Maximal dairy FE was achieved at a DCAD concentration of 426 mEq/kg of DM in experiments 1 and 2 and by substituting Na for K in experiment 3. The results of these experiments suggest that both DCAD concentration and the cation

  10. Partitioning of selected fission products from irradiated oxide fuel induced by thermal treatment

    NASA Astrophysics Data System (ADS)

    Shcherbina, Natalia; Kivel, Niko; Günther-Leopold, Ines

    2013-06-01

    The release of fission products (FPs) from spent nuclear fuel (SNF) has been studied as a function of the temperature and redox conditions. The present paper concerns essentially the high temperature separation of Cs and Sr from irradiated pressurized (PWR) and boiling water reactor (BWR) fuel of different burn-up levels with use of an in-house designed system for inductive vaporization (InVap). Using thermodynamic calculations with the Module of Fission Product Release (MFPR) code along with annealing experiments on SNF in the InVap it was shown that the speciation of Cs and Sr, hence their release behavior at high temperature, is sensitive to the redox conditions during thermal treatment. It was demonstrated that annealing conditions in the InVap can be adjusted in the way to promote the release of selected FPs without significant loss of the fuel matrix or actinides: complete release of Cs and I was achieved during treatment of irradiated fuel at 1800 °C under reducing atmosphere (0.7% H2/Ar mixture). The developed partitioning procedure can be used for the SNF pretreatment as an advanced head-end step in the hydrometallurgical or pyrochemical reprocessing technology.

  11. Production of a cytotoxic cationic antibacterial peptide in Escherichia coli using SUMO fusion partner.

    PubMed

    Li, Jian Feng; Zhang, Jie; Song, Ren; Zhang, Jia Xin; Shen, Yang; Zhang, Shuang Quan

    2009-08-01

    Antibacterial peptide CM4 (ABP-CM4) is a small cationic peptide with broad-spectrum activities against bacteria, fungi, and tumor cells, which may possibly be used as an antimicrobial agent. We report here the application of small ubiquitin-related modifier (SUMO) fusion technology to the expression and purification of cationic antibacterial peptide ABP-CM4. The fusion protein expressed in a soluble form was purified to a purity of 90% by Ni-IDA chromatography and 112 mg protein of interest was obtained per liter of fermentation culture. After the SUMO-CM4 fusion protein was cleaved by the SUMO protease at 30 degrees C for 1 h, the cleaved sample was re-applied to a Ni-IDA. Finally, about 24 mg recombinant CM4 was obtained from 1 l fermentation culture with no less than 96% purity and the recombinant CM4 had similar antimicrobial properties to the synthetic CM4. Thus, the SUMO-mediated peptide expression and purification system potentially could be employed for the production of recombinant cytotoxic peptides. PMID:19582446

  12. Mercury cycling in stream ecosystems. 2. Benthic methylmercury production and bed sediment - Pore water partitioning

    USGS Publications Warehouse

    Marvin-DiPasquale, M.; Lutz, M.A.; Brigham, M.E.; Krabbenhoft, D.P.; Aiken, G.R.; Orem, W.H.; Hall, B.D.

    2009-01-01

    Mercury speciation, controls on methylmercury (MeHg) production, and bed sediment - pore water partitioning of total Hg (THg) and MeHg were examined in bed sediment from eight geochemically diverse streams where atmospheric deposition was the predominant Hg input. Across all streams, sediment THg concentrations were best described as a combined function of sediment percent fines (%fines; particles < 63 ??m) and organic content. MeHg concentrations were best described as a combined function of organic content and the activity of the Hg(II)-methylating microbial community and were comparable to MeHg concentrations in streams with Hg inputs from industrial and mining sources. Whole sediment tin-reducible inorganic reactive Hg (Hg(II)R) was used as a proxy measure for the Hg(II) pool available for microbial methylation. In conjunction with radiotracer-derived rate constants of 203Hg(II) methylation, Hg(II)R was used to calculate MeHg production potential rates and to explain the spatial variability in MeHg concentration. The %Hg(II)R (of THg) was low (2.1 ?? 5.7%) and was inversely related to both microbial sulfate reduction rates and sediment total reduced sulfur concentration. While sediment THg concentrations were higher in urban streams, %MeHg and %Hg(II)R were higher in nonurban streams. Sediment pore water distribution coefficients (log Kd's) for both THg and MeHg were inversely related to the log-transformed ratio of pore water dissolved organic carbon (DOC) to bed sediment %fines. The stream with the highest drainage basin wetland density also had the highest pore water DOC ?? 2009 American Chemical Society.

  13. Partition of actinides and fission products between metal and molten salt phases: Theory, measurement, and application to IFR pyroprocess development

    SciTech Connect

    Ackerman, J.P.; Johnson, T.R.

    1993-10-01

    The chemical basis of Integral Fast Reactor fuel reprocessing (pyroprocessing) is partition of fuel, cladding, and fission product elements between molten LiCl-KCl and either a solid metal phase or a liquid cadmium phase. The partition reactions are described herein, and the thermodynamic basis for predicting distributions of actinides and fission products in the pyroprocess is discussed. The critical role of metal-phase activity coefficients, especially those of rare earth and the transuranic elements, is described. Measured separation factors, which are analogous to equilibrium constants but which involve concentrations rather than activities, are presented. The uses of thermodynamic calculations in process development are described, as are computer codes developed for calculating material flows and phase compositions in pyroprocessing.

  14. Maximum Entropy Production Modeling of Evapotranspiration Partitioning on Heterogeneous Terrain and Canopy Cover: advantages and limitations.

    NASA Astrophysics Data System (ADS)

    Gutierrez-Jurado, H. A.; Guan, H.; Wang, J.; Wang, H.; Bras, R. L.; Simmons, C. T.

    2015-12-01

    Quantification of evapotranspiration (ET) and its partition over regions of heterogeneous topography and canopy poses a challenge using traditional approaches. In this study, we report the results of a novel field experiment design guided by the Maximum Entropy Production model of ET (MEP-ET), formulated for estimating evaporation and transpiration from homogeneous soil and canopy. A catchment with complex terrain and patchy vegetation in South Australia was instrumented to measure temperature, humidity and net radiation at soil and canopy surfaces. Performance of the MEP-ET model to quantify transpiration and soil evaporation was evaluated during wet and dry conditions with independently and directly measured transpiration from sapflow and soil evaporation using the Bowen Ratio Energy Balance (BREB). MEP-ET transpiration shows remarkable agreement with that obtained through sapflow measurements during wet conditions, but consistently overestimates the flux during dry periods. However, an additional term introduced to the original MEP-ET model accounting for higher stomatal regulation during dry spells, based on differences between leaf and air vapor pressure deficits and temperatures, significantly improves the model performance. On the other hand, MEP-ET soil evaporation is in good agreement with that from BREB regardless of moisture conditions. The experimental design allows a plot and tree scale quantification of evaporation and transpiration respectively. This study confirms for the first time that the MEP-ET originally developed for homogeneous open bare soil and closed canopy can be used for modeling ET over heterogeneous land surfaces. Furthermore, we show that with the addition of an empirical function simulating the plants ability to regulate transpiration, and based on the same measurements of temperature and humidity, the method can produce reliable estimates of ET during both wet and dry conditions without compromising its parsimony.

  15. Production of U{sub 3}O{sub 8} Using Macroporous Sulfonate Cation Exchange Resins in the Bead Form

    SciTech Connect

    Mosley, W.C.

    2001-08-16

    The use of cation exchange resin to product U{sub 3}O{sub 8} suitable for powder metallurgy fabrication of reactor fuel tubes with Al-U{sub 3}O{sub 8} cores is being investigated. This report presents the results of those studies.

  16. Structures of the dehydrogenation products of methane activation by 5d transition metal cations.

    PubMed

    Lapoutre, V J F; Redlich, B; van der Meer, A F G; Oomens, J; Bakker, J M; Sweeney, A; Mookherjee, A; Armentrout, P B

    2013-05-23

    The activation of methane by gas-phase transition metal cations (M(+)) has been studied extensively, both experimentally and using density functional theory (DFT). Methane is exothermically dehydrogenated by several 5d metal ions to form [M,C,2H](+) and H2. However, the structure of the dehydrogenation product has not been established unambiguously. Two types of structures have been considered: a carbene structure where an intact CH2 fragment is bound to the metal (M(+)-CH2) and a carbyne (hydrido-methylidyne) structure with both a CH and a hydrogen bound to the metal separately (H-M(+)-CH). For metal ions with empty d-orbitals, an agostic interaction can occur that could influence the competition between carbene and carbyne structures. In this work, the gas phase [M,C,2H](+) (M = Ta, W, Ir, Pt) products are investigated by infrared multiple-photon dissociation (IR-MPD) spectroscopy using the Free-Electron Laser for IntraCavity Experiments (FELICE). Metal cations are formed in a laser ablation source and react with methane pulsed into a reaction channel downstream. IR-MPD spectra of the [M,C,2H](+) species are measured in the 300-3500 cm(-1) spectral range by monitoring the loss of H (2H in the case of [Ir,C,2H](+)). For each system, the experimental spectrum closely resembles the calculated spectrum of the lowest energy structure calculated using DFT: for Pt, a classic C(2v) carbene structure; for Ta and W, carbene structures that are distorted by agostic interactions; and a carbyne structure for the Ir complex. The Ir carbyne structure was not considered previously. To obtain this agreement, the calculated harmonic frequencies are scaled with a scaling factor of 0.939, which is fairly low and can be attributed to the strong redshift induced by the IR multiple-photon excitation process of these small molecules. These four-atomic species are among the smallest systems studied by IR-FEL based IR-MPD spectroscopy, and their spectra demonstrate the power of IR

  17. Effects of the partitioning of diffuse and direct solar radiation on satellite-based modeling of crop gross primary production

    NASA Astrophysics Data System (ADS)

    Xin, Qinchuan; Gong, Peng; Suyker, Andrew E.; Si, Yali

    2016-08-01

    Modeling crop gross primary production (GPP) is critical to understanding the carbon dynamics of agro-ecosystems. Satellite-based studies have widely used production efficiency models (PEM) to estimate cropland GPP, wherein light use efficiency (LUE) is a key model parameter. One factor that has not been well considered in many PEMs is that canopy LUE could vary with illumination conditions. This study investigates how the partitioning of diffuse and direct solar radiation influences cropland GPP using both flux tower and satellite data. The field-measured hourly LUE under cloudy conditions was 1.50 and 1.70 times higher than that under near clear-sky conditions for irrigated corn and soybean, respectively. We applied a two-leaf model to simulate the canopy radiative transfer process, where modeled photosynthetically active radiation (PAR) absorbed by canopy agreed with tower measurements (R2 = 0.959 and 0.914 for corn and soybean, respectively). Derived canopy LUE became similar after accounting for the impact of light saturation on leaf photosynthetic capacity under varied illumination conditions. The impacts of solar radiation partitioning on satellite-based modeling of crop GPP was examined using vegetation indices (VI) derived from MODIS data. Consistent with the field modeling results, the relationship between daily GPP and PAR × VI under varied illumination conditions showed different patterns in terms of regression slope and intercept. We proposed a function to correct the influences of direct and diffuse radiation partitioning and the explained variance of flux tower GPP increased in all experiments. Our results suggest that the non-linear response of leaf photosynthesis to light absorption contributes to higher canopy LUE on cloudy days than on clear days. We conclude that accounting for the impacts of solar radiation partitioning is necessary for modeling crop GPP on a daily or shorter basis.

  18. Production of phytotoxic cationic α-helical antimicrobial peptides in plant cells using inducible promoters.

    PubMed

    Company, Nuri; Nadal, Anna; Ruiz, Cristina; Pla, Maria

    2014-01-01

    Synthetic linear antimicrobial peptides with cationic α-helical structures, such as BP100, have potent and specific activities against economically important plant pathogenic bacteria. They are also recognized as valuable therapeutics and preservatives. However, highly active BP100 derivatives are often phytotoxic when expressed at high levels as recombinant peptides in plants. Here we demonstrate that production of recombinant phytotoxic peptides in transgenic plants is possible by strictly limiting transgene expression to certain tissues and conditions, and specifically that minimization of this expression during transformation and regeneration of transgenic plants is essential to obtain viable plant biofactories. On the basis of whole-genome transcriptomic data available online, we identified the Os.hsp82 promoter that fulfilled this requirement and was highly induced in response to heat shock. Using this strategy, we generated transgenic rice lines producing moderate yields of severely phytotoxic BP100 derivatives on exposure to high temperature. In addition, a threshold for gene expression in selected tissues and stages was experimentally established, below which the corresponding promoters should be suitable for driving the expression of recombinant phytotoxic proteins in genetically modified plants. In view of the growing transcriptomics data available, this approach is of interest to assist promoter selection for specific purposes. PMID:25387106

  19. Production of Phytotoxic Cationic α-Helical Antimicrobial Peptides in Plant Cells Using Inducible Promoters

    PubMed Central

    Company, Nuri; Nadal, Anna; Ruiz, Cristina; Pla, Maria

    2014-01-01

    Synthetic linear antimicrobial peptides with cationic α-helical structures, such as BP100, have potent and specific activities against economically important plant pathogenic bacteria. They are also recognized as valuable therapeutics and preservatives. However, highly active BP100 derivatives are often phytotoxic when expressed at high levels as recombinant peptides in plants. Here we demonstrate that production of recombinant phytotoxic peptides in transgenic plants is possible by strictly limiting transgene expression to certain tissues and conditions, and specifically that minimization of this expression during transformation and regeneration of transgenic plants is essential to obtain viable plant biofactories. On the basis of whole-genome transcriptomic data available online, we identified the Os.hsp82 promoter that fulfilled this requirement and was highly induced in response to heat shock. Using this strategy, we generated transgenic rice lines producing moderate yields of severely phytotoxic BP100 derivatives on exposure to high temperature. In addition, a threshold for gene expression in selected tissues and stages was experimentally established, below which the corresponding promoters should be suitable for driving the expression of recombinant phytotoxic proteins in genetically modified plants. In view of the growing transcriptomics data available, this approach is of interest to assist promoter selection for specific purposes. PMID:25387106

  20. Carbon partitioning to the terpenoid biosynthetic pathway enables heterologous β-phellandrene production in Escherichia coli cultures.

    PubMed

    Formighieri, Cinzia; Melis, Anastasios

    2014-12-01

    Escherichia coli was used as a microbial system for the heterologous synthesis of β-phellandrene, a monoterpene of plant origin with several potential commercial applications. Expression of Lavandula angustifolia β-phellandrene synthase (PHLS), alone or in combination with Picea abies geranyl-diphosphate synthase in E. coli, resulted in no β-phellandrene accumulation, in sharp contrast to observations with PHLS-transformed cyanobacteria. Lack of β-phellandrene biosynthesis in E. coli was attributed to the limited endogenous carbon partitioning through the native 2-C-methylerythritol-4-phosphate (MEP) pathway. Heterologous co-expression of the mevalonic acid pathway, enhancing cellular carbon partitioning and flux toward the universal isoprenoid precursors, isopentenyl-diphosphate and dimethylallyl-diphosphate, was required to confer β-phellandrene production. Differences in endogenous carbon flux toward the synthesis of isoprenoids between photosynthetic (Synechocystis) and non-photosynthetic bacteria (E. coli) are discussed in terms of differences in the regulation of carbon partitioning through the MEP biosynthetic pathway in the two systems. PMID:25116411

  1. A comprehensive classification of solvent systems used for natural product purifications in countercurrent and centrifugal partition chromatography.

    PubMed

    Skalicka-Woźniak, Krystyna; Garrard, Ian

    2015-11-01

    Using both library paper copies and modern electronic copies, every known, published, English-language journal paper that employs either countercurrent or centrifugal partition chromatography solvent systems for natural product purifications has been studied and the solvent systems classified in a comprehensive database. Papers were studied from the earliest found examples containing natural product separations in 1984 until the end of 2014. In total, 2594 solvent systems have been classified, of which 272 are gradient systems. To observe any trends or patterns in the data, the natural product solutes were divided into 21 classes and the solvent systems into 7 different types. The complete database, sorted according to natural product class, is available for download to assist separation scientists in future liquid-liquid chromatography purifications. PMID:26219437

  2. Surface cationized cellulose nanofibrils for the production of contact active antimicrobial surfaces.

    PubMed

    Saini, Seema; Yücel Falco, Çiğdem; Belgacem, Mohamed Naceur; Bras, Julien

    2016-01-01

    In the last decade, a new fiber pretreatment has been proposed to make easy cellulose fibrillation into microfibrils. In this context, different surface cationized MFC was prepared by optimizing the experimental parameters for cellulose fibers pretreatment before fibrillation. All MFCs were characterized by conductometric titration to establish degree of substitution, field emission gun scanning electron microscopy (FEG-SEM), atomic force microscopy (AFM) and optical microscopy assessed the effect of pretreatment on the morphology of the ensuing MFCs. Antibacterial activities of neat and cationized MFC samples were investigated against Gram positive bacteria (Bacillus subtilis, Staphylococcus aureus) and Gram negative bacteria (Escherichia coli). The CATMFC sample at DS greater than 0.18 displayed promising results with antibacterial properties without any leaching of quaternary ammonium into the environment. This work proved the potential of cationic MFCs with specific DS for contact active antimicrobial surface applications in active food packaging, medical packaging or in health and cosmetic field. PMID:26453874

  3. Influence of organic carbon and nitrate loading on partitioning between dissimilatory nitrate reduction to ammonium (DNRA) and N2 production

    NASA Astrophysics Data System (ADS)

    Hardison, Amber K.; Algar, Christopher K.; Giblin, Anne E.; Rich, Jeremy J.

    2015-09-01

    were inferred based on modeled rates as well as stoichiometric conversions of NH4+ production in pre-incubated vials. Based on model results, partitioning between DNRA and N2 production was positively linearly related to the ratio of C decomposition to NO3- reduction rates (C/NO3-) but not C decomposition alone. Based on vial results, partitioning was significantly related to C decomposition. Overall, this study supports the hypothesis that high organic C loading is a prerequisite for DNRA to be favored over denitrification but that N2 production may still be significant when organic C is high depending on NO3- availability.

  4. How drought severity constrains gross primary production(GPP) and its partitioning among carbon pools in a Quercus ilex coppice?

    NASA Astrophysics Data System (ADS)

    Rambal, S.; Lempereur, M.; Limousin, J. M.; Martin-StPaul, N. K.; Ourcival, J. M.; Rodríguez-Calcerrada, J.

    2014-12-01

    The partitioning of photosynthates toward biomass compartments plays a crucial role in the carbon (C) sink function of forests. Few studies have examined how carbon is allocated toward plant compartments in drought-prone forests. We analyzed the fate of gross primary production (GPP) in relation to yearly water deficit in an old evergreen Mediterranean Quercus ilex coppice severely affected by water limitations. Carbon fluxes between the ecosystem and the atmosphere were measured with an eddy covariance flux tower running continuously since 2001. Discrete measurements of litterfall, stem growth and fAPAR allowed us to derive annual productions of leaves, wood, flowers and acorns, and an isometric relationship between stem and belowground biomass has been used to estimate perennial belowground growth. By combining eddy covariance fluxes with annual net primary productions (NPP), we managed to close a C budget and derive values of autotrophic, heterotrophic respirations and carbon-use efficiency (CUE; the ratio between NPP and GPP). Average values of yearly net ecosystem production (NEP), GPP and Reco were 282, 1259 and 977 g C m-2. The corresponding aboveground net primary production (ANPP) components were 142.5, 26.4 and 69.6 g C m-2 for leaves, reproductive effort (flowers and fruits) and stems, respectively. NEP, GPP and Reco were affected by annual water deficit. Partitioning to the different plant compartments was also impacted by drought, with a hierarchy of responses going from the most affected - the stem growth - to the least affected - the leaf production. The average CUE was 0.40, which is well in the range for Mediterranean-type forest ecosystems. CUE tended to decrease less drastically in response to drought than GPP and NPP did, probably due to drought acclimation of autotrophic respiration. Overall, our results provide a baseline for modeling the inter-annual variations of carbon fluxes and allocation in this widespread Mediterranean ecosystem, and

  5. Actinide cation-cation complexes

    SciTech Connect

    Stoyer, N.J.; Seaborg, G.T.

    1994-12-01

    The +5 oxidation state of U, Np, Pu, and Am is a linear dioxo cation (AnO{sub 2}{sup +}) with a formal charge of +1. These cations form complexes with a variety of other cations, including actinide cations. Other oxidation states of actinides do not form these cation-cation complexes with any cation other than AnO{sub 2}{sup +}; therefore, cation-cation complexes indicate something unique about AnO{sub 2}{sup +} cations compared to actinide cations in general. The first cation-cation complex, NpO{sub 2}{sup +}{center_dot}UO{sub 2}{sup 2+}, was reported by Sullivan, Hindman, and Zielen in 1961. Of the four actinides that form AnO{sub 2}{sup +} species, the cation-cation complexes of NpO{sub 2}{sup +} have been studied most extensively while the other actinides have not. The only PuO{sub 2}{sup +} cation-cation complexes that have been studied are with Fe{sup 3+} and Cr{sup 3+} and neither one has had its equilibrium constant measured. Actinides have small molar absorptivities and cation-cation complexes have small equilibrium constants; therefore, to overcome these obstacles a sensitive technique is required. Spectroscopic techniques are used most often to study cation-cation complexes. Laser-Induced Photacoustic Spectroscopy equilibrium constants for the complexes NpO{sub 2}{sup +}{center_dot}UO{sub 2}{sup 2+}, NpO{sub 2}{sup +}{center_dot}Th{sup 4+}, PuO{sub 2}{sup +}{center_dot}UO{sub 2}{sup 2+}, and PuO{sub 2}{sup +}{center_dot}Th{sup 4+} at an ionic strength of 6 M using LIPAS are 2.4 {plus_minus} 0.2, 1.8 {plus_minus} 0.9, 2.2 {plus_minus} 1.5, and {approx}0.8 M{sup {minus}1}.

  6. Adaptive Partitioning QM/MM Dynamics Simulations for Substrate Uptake, Product Release, and Solvent Exchange.

    PubMed

    Duster, A; Garza, C; Lin, H

    2016-01-01

    Combined quantum mechanics/molecular mechanics (QM/MM) plays an important role in multiscale simulations of biological systems including enzymes. The adaptive-partitioning (AP) schemes surpass the conventional QM/MM methods in that they allow the on-the-fly, smooth exchange of particles between QM and MM subsystems in molecular dynamics simulations, leading to a seamless and dynamic integration of the QM and MM realms. Originally developed for simulating ion solvation in bulk solutions, the AP schemes have recently been extended to the treatment of proteins, fostering applications in the simulations of enzymes. The present contribution provides a detailed account of the AP schemes. We delineate the background of the algorithms and their parallel implementation, as well as offer practical advice and examples for their applications in the simulations of biological systems. PMID:27498644

  7. Effects of soil structure destruction on methane production andcarbon partitioning between methanogenic pathways in tropical rain forestsoils

    SciTech Connect

    Teh, Yit Arn; Silver, Whendee L.

    2005-01-25

    Controls on methanogenesis are often determined fromlaboratory incubations of soils converted to slurries. Destruction ofsoil structure during slurry conversion may disrupt syntrophicassociations, kill methanogens, and/or alter the microsite distributionof methanogenic activity, suppressing CH4 production. The effects ofslurry conversion on methanogenesis were investigated to determine ifdisruption of aggregate structure impacted methanogenesis, substrateutilization, and C partitioning between methanogenic pathways. Soils werecollected from the tropical rain forest life zone of the LuquilloExperimental Forest, Puerto Rico, and exposed to different physicaldisturbances, including flooding and physical homogenization. Slurryconversion negatively impacted methanogenesis. Rates of CH4 productiondeclined by a factor of 17 after well-aggregated soils were converted toslurries. Significantly more 13C-acetate was recovered in CO2 compared toCH4 after slurry conversion, suggesting that methanogens consumed lessacetate after slurry conversion and may have competed less effectivelywith other anaerobes for acetate. Isotopic data indicate that therelative partitioning of C between aceticlastic and hydrogenotrophicpathways wasunchanged after slurry conversion. These data suggest thatexperiments which destroy soil structure may significantly underestimatemethanogenesis and overestimate the potential for other microorganisms tocompete with methanogens for organic substrates. Current knowledge of thefactors that regulate methanogenesis in soil may be biased by thefindings of slurry-based experiments, that do not accurately representthe complex, spatially heterogeneous conditions found in well-aggregatedsoils.

  8. Evapotranspiration partitioning and variation of sap flow in female and male parents of maize for hybrid seed production in arid region

    Technology Transfer Automated Retrieval System (TEKTRAN)

    Understanding the variation of sap flow in female and male parents of maize for hybrid seed production and evapotranspiration (ET) partitioning is useful in accurately determining water use of the female and male parents and improving irrigation management of maize for hybrid seed production. Sap fl...

  9. Partition search

    SciTech Connect

    Ginsberg, M.L.

    1996-12-31

    We introduce a new form of game search called partition search that incorporates dependency analysis, allowing substantial reductions in the portion of the tree that needs to be expanded. Both theoretical results and experimental data are presented. For the game of bridge, partition search provides approximately as much of an improvement over existing methods as {alpha}-{beta} pruning provides over minimax.

  10. Stand-level patterns of carbon fluxes and partitioning in a Eucalyptus grandis plantation across a gradient of productivity, in Sao Paulo State, Brazil.

    PubMed

    Campoe, Otávio C; Stape, José Luiz; Laclau, Jean-Paul; Marsden, Claire; Nouvellon, Yann

    2012-06-01

    Wood production represents a large but variable fraction of gross primary production (GPP) in highly productive Eucalyptus plantations. Assessing patterns of carbon (C) partitioning (C flux as a fraction of GPP) between above- and belowground components is essential to understand mechanisms driving the C budget of these plantations. Better knowledge of fluxes and partitioning to woody and non-woody tissues in response to site characteristics and resource availability could provide opportunities to increase forest productivity. Our study aimed at investigating how C allocation varied within one apparently homogeneous 90 ha stand of Eucalyptus grandis (W. Hill ex Maiden) in Southeastern Brazil. We assessed annual above-ground net primary production (ANPP: stem, leaf, and branch production) and total belowground C flux (TBCF: the sum of root production and respiration and mycorrhizal production and respiration), GPP (computed as the sum of ANPP, TBCF and estimated aboveground respiration) on 12 plots representing the gradient of productivity found within the stand. The spatial heterogeneity of topography and associated soil attributes across the stand likely explained this fertility gradient. Component fluxes of GPP and C partitioning were found to vary among plots. Stem NPP ranged from 554 g C m(-2) year(-1) on the plot with lowest GPP to 923 g C m(-2) year(-1) on the plot with highest GPP. Total belowground carbon flux ranged from 497 to 1235 g C m(-2) year(-1) and showed no relationship with ANPP or GPP. Carbon partitioning to stem NPP increased from 0.19 to 0.23, showing a positive trend of increase with GPP (R(2) = 0.29, P = 0.07). Variations in stem wood production across the gradient of productivity observed at our experimental site were a result of the variability in C partitioning to different forest system components. PMID:22543478

  11. Comparison of modeling approaches for carbon partitioning: Impact on estimates of global net primary production and equilibrium biomass of woody vegetation from MODIS GPP

    NASA Astrophysics Data System (ADS)

    Ise, Takeshi; Litton, Creighton M.; Giardina, Christian P.; Ito, Akihiko

    2010-12-01

    Partitioning of gross primary production (GPP) to aboveground versus belowground, to growth versus respiration, and to short versus long-lived tissues exerts a strong influence on ecosystem structure and function, with potentially large implications for the global carbon budget. A recent meta-analysis of forest ecosystems suggests that carbon partitioning to leaves, stems, and roots varies consistently with GPP and that the ratio of net primary production (NPP) to GPP is conservative across environmental gradients. To examine influences of carbon partitioning schemes employed by global ecosystem models, we used this meta-analysis-based model and a satellite-based (MODIS) terrestrial GPP data set to estimate global woody NPP and equilibrium biomass, and then compared it to two process-based ecosystem models (Biome-BGC and VISIT) using the same GPP data set. We hypothesized that different carbon partitioning schemes would result in large differences in global estimates of woody NPP and equilibrium biomass. Woody NPP estimated by Biome-BGC and VISIT was 25% and 29% higher than the meta-analysis-based model for boreal forests, with smaller differences in temperate and tropics. Global equilibrium woody biomass, calculated from model-specific NPP estimates and a single set of tissue turnover rates, was 48 and 226 Pg C higher for Biome-BGC and VISIT compared to the meta-analysis-based model, reflecting differences in carbon partitioning to structural versus metabolically active tissues. In summary, we found that different carbon partitioning schemes resulted in large variations in estimates of global woody carbon flux and storage, indicating that stand-level controls on carbon partitioning are not yet accurately represented in ecosystem models.

  12. Comparison of Modeling Approaches for Carbon Partitioning: Impact on Estimates of Global Net Primary Production and Equilibrium Biomass of Woody Vegetation from MODIS GPP

    NASA Astrophysics Data System (ADS)

    Ise, T.; Litton, C. M.; Giardina, C. P.; Ito, A.

    2009-12-01

    Plant partitioning of carbon (C) to above- vs. belowground, to growth vs. respiration, and to short vs. long lived tissues exerts a large influence on ecosystem structure and function with implications for the global C budget. Importantly, outcomes of process-based terrestrial vegetation models are likely to vary substantially with different C partitioning algorithms. However, controls on C partitioning patterns remain poorly quantified, and studies have yielded variable, and at times contradictory, results. A recent meta-analysis of forest studies suggests that the ratio of net primary production (NPP) and gross primary production (GPP) is fairly conservative across large scales. To illustrate the effect of this unique meta-analysis-based partitioning scheme (MPS), we compared an application of MPS to a terrestrial satellite-based (MODIS) GPP to estimate NPP vs. two global process-based vegetation models (Biome-BGC and VISIT) to examine the influence of C partitioning on C budgets of woody plants. Due to the temperature dependence of maintenance respiration, NPP/GPP predicted by the process-based models increased with latitude while the ratio remained constant with MPS. Overall, global NPP estimated with MPS was 17 and 27% lower than the process-based models for temperate and boreal biomes, respectively, with smaller differences in the tropics. Global equilibrium biomass of woody plants was then calculated from the NPP estimates and tissue turnover rates from VISIT. Since turnover rates differed greatly across tissue types (i.e., metabolically active vs. structural), global equilibrium biomass estimates were sensitive to the partitioning scheme employed. The MPS estimate of global woody biomass was 7-21% lower than that of the process-based models. In summary, we found that model output for NPP and equilibrium biomass was quite sensitive to the choice of C partitioning schemes. Carbon use efficiency (CUE; NPP/GPP) by forest biome and the globe. Values are means

  13. ESR and ENDOR study of the guanine cation: Secondary product in 5'-dGMP

    SciTech Connect

    Hole, E.O.; Nelson, W.H.; Close, D.M.; Sagstuen, E.

    1987-05-01

    Previous ESR studies of x-irradiated single crystals of 2'-deoxyguanosine-5'-monophosphate have indicated the presence of a radical thought to be formed by deprotonation of a primary base cation at N1. In this communication are reported some results of detailed ESR and ENDOR experiments at 10 K conflicting with the above results. One of the radicals detected exhibited two ..cap alpha..-proton type couplings. The data analysis shows that one coupling is due to the exchangeable proton of the extra-annular NH/sub 2/ group, while the other is due to the proton bonded at C8. The experimental spin densities were rho(N10) = 0.33, and rho(C8) = 0.18. The results agree reasonably well with the INDO calculated spin density distribution of a radical formed by deprotonation at N10 of a primary cation radical. The radical is stable on warming to about 200 K where it anneals rapidly.

  14. Exon recognition and nucleocytoplasmic partitioning determine AMPD1 alternative transcript production.

    PubMed Central

    Mineo, I; Holmes, E W

    1991-01-01

    Two mature transcripts are produced from the rat AMP deaminase 1 (AMPD1) gene, one that retains exon 2 and one from which exon 2 has been removed. The ratio of these two transcripts is controlled by stage-specific and tissue-specific signals (I. Mineo, P. R. H. Clarke, R. L. Sabina, and E. W. Holmes, Mol. Cell. Biol. 10:5271-5278, 1990; R. L. Sabina, N. Ogasawara, and E. W. Holmes, Mol. Cell. Biol. 9:2244-2246, 1989). By using transfection studies with native, mutant, and chimeric minigene constructs, two steps in RNA processing that determine the ratio of these two transcripts have been identified. The first step is recognition of this exon in the primary transcript. The primary transcript is subject to alternative splicing in which exon 2 is either recognized and thereby included in the mature mRNA or is ignored and retained in a composite intron containing intron 1-exon 2-intron 2. The following properties of the primary transcript influence exon recognition. (i) Exon 2 is intrinsically difficult to recognize, possibly because of its small size (only 12 bases) and/or a suboptimal 5' donor site at the exon 2-intron 2 boundary. (ii) Intron 2 plays a permissive role in recognition of exon 2 because it is removed at a relatively slow rate, presumably because of the suboptimal polypyrimidine tract in the putative 3' branch site. The second step in RNA processing that influences the ratio of mature transcripts produced from the AMPD1 gene occurs subsequent to the ligation of exon 2 to exon 1. An RNA intermediate, composed of exon 1-exon 2-intron 2-exon 3, is produced in the first processing step, but it is variably retained in the nucleus. Retention of this intermediate in the nucleus is associated with accumulation of the mature mRNA containing exon 2, while cytoplasmic escape of this intermediate is reactions, exon recognition and nucleocytoplasmic partitioning, determine the relative abundance of alternative mRNAs derived from the AMPD1 gene. Images PMID:1922051

  15. Use of wastes derived from earthquakes for the production of concrete masonry partition wall blocks

    SciTech Connect

    Xiao Zhao; Ling, Tung-Chai; Kou, Shi-Cong; Wang Qingyuan; Poon, Chi-Sun

    2011-08-15

    Highlights: > Solved the scientific and technological challenges impeding use of waste rubble derived from earthquake, by providing an alternative solution of recycling the waste in moulded concrete block products. > Significant requirements for optimum integration on the utilization of the waste aggregates in the production of concrete blocks are investigated. > A thorough understanding of the mechanical properties of concrete blocks made with waste derived from earthquake is reported. - Abstract: Utilization of construction and demolition (C and D) wastes as recycled aggregates in the production of concrete and concrete products have attracted much attention in recent years. However, the presence of large quantities of crushed clay brick in some the C and D waste streams (e.g. waste derived collapsed masonry buildings after an earthquake) renders the recycled aggregates unsuitable for high grade use. One possibility is to make use of the low grade recycled aggregates for concrete block production. In this paper, we report the results of a comprehensive study to assess the feasibility of using crushed clay brick as coarse and fine aggregates in concrete masonry block production. The effects of the content of crushed coarse and fine clay brick aggregates (CBA) on the mechanical properties of non-structural concrete block were quantified. From the experimental test results, it was observed that incorporating the crushed clay brick aggregates had a significant influence on the properties of blocks. The hardened density and drying shrinkage of the block specimens decreased with an increase in CBA content. The use of CBA increased the water absorption of block specimens. The results suggested that the amount of crushed clay brick to be used in concrete masonry blocks should be controlled at less than 25% (coarse aggregate) and within 50-75% for fine aggregates.

  16. DEVELOPING ALTERNATIVE POWER TO DRIVE A PARTITIONED AQUACULTURE SYSTEM FOR INTENSIVE FOOD FISH PRODUCTION

    EPA Science Inventory

    Data collected, such as fish production rates and construction/operating costs, will allow us to evaluate the predictions generated by our modeling activities as well as provide real estimates of cost/benefit for the application of alternative PAS technology in temperate water...

  17. Use of wastes derived from earthquakes for the production of concrete masonry partition wall blocks.

    PubMed

    Xiao, Zhao; Ling, Tung-Chai; Kou, Shi-Cong; Wang, Qingyuan; Poon, Chi-Sun

    2011-08-01

    Utilization of construction and demolition (C&D) wastes as recycled aggregates in the production of concrete and concrete products have attracted much attention in recent years. However, the presence of large quantities of crushed clay brick in some the C&D waste streams (e.g. waste derived collapsed masonry buildings after an earthquake) renders the recycled aggregates unsuitable for high grade use. One possibility is to make use of the low grade recycled aggregates for concrete block production. In this paper, we report the results of a comprehensive study to assess the feasibility of using crushed clay brick as coarse and fine aggregates in concrete masonry block production. The effects of the content of crushed coarse and fine clay brick aggregates (CBA) on the mechanical properties of non-structural concrete block were quantified. From the experimental test results, it was observed that incorporating the crushed clay brick aggregates had a significant influence on the properties of blocks. The hardened density and drying shrinkage of the block specimens decreased with an increase in CBA content. The use of CBA increased the water absorption of block specimens. The results suggested that the amount of crushed clay brick to be used in concrete masonry blocks should be controlled at less than 25% (coarse aggregate) and within 50-75% for fine aggregates. PMID:21570277

  18. Partition Equilibrium

    NASA Astrophysics Data System (ADS)

    Feldman, Michal; Tennenholtz, Moshe

    We introduce partition equilibrium and study its existence in resource selection games (RSG). In partition equilibrium the agents are partitioned into coalitions, and only deviations by the prescribed coalitions are considered. This is in difference to the classical concept of strong equilibrium according to which any subset of the agents may deviate. In resource selection games, each agent selects a resource from a set of resources, and its payoff is an increasing (or non-decreasing) function of the number of agents selecting its resource. While it has been shown that strong equilibrium exists in resource selection games, these games do not possess super-strong equilibrium, in which a fruitful deviation benefits at least one deviator without hurting any other deviator, even in the case of two identical resources with increasing cost functions. Similarly, strong equilibrium does not exist for that restricted two identical resources setting when the game is played repeatedly. We prove that for any given partition there exists a super-strong equilibrium for resource selection games of identical resources with increasing cost functions; we also show similar existence results for a variety of other classes of resource selection games. For the case of repeated games we identify partitions that guarantee the existence of strong equilibrium. Together, our work introduces a natural concept, which turns out to lead to positive and applicable results in one of the basic domains studied in the literature.

  19. Advance chromatin extraction enhances performance and productivity of cation exchange chromatography-based capture of Immunoglobulin G monoclonal antibodies.

    PubMed

    Nian, Rui; Gagnon, Pete

    2016-07-01

    The impact of host cell-derived chromatin was investigated on the performance and productivity of cation exchange chromatography as a method for capture-purification of an IgG monoclonal antibody. Cell culture supernatant was prepared for loading by titration to pH 6.0, dilution with water to a conductivity of 4mS/cm, then microfiltration to remove solids. DNA content was reduced 99% to 30ppm, histone host cell protein content by 76% to 6300ppm, non-histone host cell protein content by 15% to 321,000ppm, and aggregates from 33% to 15%. IgG recovery was 83%. An alternative preparation was performed, adding octanoic acid, allantoin, and electropositive particles to the harvest at pH 5.3, then removing solids. DNA content was reduced to<1 ppb, histones became undetectable, non-histones were reduced to 24,000ppm, and aggregates were reduced to 2.4%. IgG recovery was 95%. This treatment increased dynamic capacity (DBC) of cation exchange capture to 173g/L and enabled the column to reduce non-histone host proteins to 671ppm. Step recovery was 99%. A single multimodal polishing step further reduced them to 15ppm and aggregates to <0.1%. Overall process recovery was 89%. Productivity at feed stream IgG concentrations of 5-10g/L was roughly double the productivity of a same-size protein A column with a DBC of 55g/L. PMID:27247214

  20. Product energy partitioning in the decomposition of state-selectively excited HOOH and HOOD

    SciTech Connect

    Rizzo, T.R.; Hayden, C.C.; Crim, F.F.

    1985-01-01

    Direct excitation of overtone vibrations is a highly selective energy-deposition technique which permits detailed studies of unimolecular reaction dynamics when combined with laser-induced fluorescence for state-resolved product detection. Applying this method to hydrogen peroxide and its partially deuterated analogue (HOOD) provides vibrational overtone excitation spectra of the molecules in the region of the nu = 6 level of the OH stretching vibration and determines the OH or OD product rotational energy distributions. Partially deuterating HOOH produces a dramatic change in the shape of the pure stretching transition while other features, which apparently involve the deuterated portion of the molecule, move to lower frequencies. The decomposition products are formed in rotational states up to the limit of the available energy but have a markedly non-thermal distribution, with the populations decreasing sharply at high rotational levels. Detecting the OD fragment following excitation of the OH stretching transition in the parent molecule reveals an energy disposal pattern which is similar to that in the undeuterated case.

  1. Fission product partitioning in aerosol release from simulated spent nuclear fuel

    NASA Astrophysics Data System (ADS)

    Di Lemma, F. G.; Colle, J. Y.; Rasmussen, G.; Konings, R. J. M.

    2015-10-01

    Aerosols created by the vaporization of simulated spent nuclear fuel (simfuel) were produced by laser heating techniques and characterised by a wide range of post-analyses. In particular attention has been focused on determining the fission product behaviour in the aerosols, in order to improve the evaluation of the source term and consequently the risk associated with release from spent fuel sabotage or accidents. Different simulated spent fuels were tested with burn-up up to 8 at. %. The results from the aerosol characterisation were compared with studies of the vaporization process by Knudsen Effusion Mass Spectrometry and thermochemical equilibrium calculations. These studies permit an understanding of the aerosol gaseous precursors and the gaseous reactions taking place during the aerosol formation process.

  2. Aerosols and their influence on radiation partitioning and savanna productivity in northern Australia

    SciTech Connect

    Kanniah, K. D.; Beringer, J.; Tapper, N. J.; Long, Charles N.

    2010-05-01

    We investigated the effect of aerosols and clouds on the Net Ecosystem Productivity (NEP) of savannas in northern Australia using aerosol optical depth, clouds and radiation data from the Atmospheric Radiation Measurement (ARM) site in Darwin and carbon flux data measured from eddy covariance techniques from a site at Howard Springs, 35km southeast of Darwin. Generally we found that the concentration of aerosols in this region was relatively low than observed at other sites, therefore the proportion of diffuse radiation reaching the earths surface was only ~ 30%. As a result, we observed only a modest change in carbon uptake under aerosol laden skies and there was no significant difference for dry season Radiation Use Efficiency (RUE) between clear sky, aerosols or thin clouds. On the other hand thick clouds in the wet season produce much more diffuse radiation than aerosols or thin clouds and therefore the initial canopy quantum efficiency was seen to increase 45 and 2.5 times more than under thin clouds and aerosols respectively. The normalized carbon uptake under thick clouds is 57% and 50% higher than under aerosols and thin clouds respectively even though the total irradiance received under thick clouds was reduced 59% and 50% than under aerosols and thin clouds respectively. However, reduction in total irradiance decreases the mean absolute carbon uptake as much as 22% under heavy cloud cover compared to thin clouds or aerosols. Thus, any increase in aerosol concentration or cloud cover that can enhance the diffuse component may have large impacts on productivity in this region.

  3. Optimizing rainwater partitioning and millet production on degraded land in Niger using Water and Soil Conservation practices

    NASA Astrophysics Data System (ADS)

    Wildemeersch, Jasmien C. J.; Garba, Maman; Al-Barri, Bashar; Sabiou, Mahamane; Cornelis, Wim M.

    2015-04-01

    As a result of growing population pressure and severe soil erosion, farmers in the Sahel increasingly rely on degraded lands for millet production. The adverse Sahelian rainfall distribution and imbalanced rainfall partitioning over the rootzone of these degraded lands therefore calls for sustainable land management strategies that are water resource efficient. This study evaluates the soil-water balance of promising Nigerien Water and Soil Conservation (WSC) techniques (i.e., zaï pits, demi-lune microcatchments and scarification with standing crop residue) and their impact on millet yield by means of an in-situ field experiment (2011-2013) on degraded laterite soil classified as Plinthosol with a 1% slope. All WSC practices received the same amount of fertilizer and were compared to two control practices, one with and one without fertilizer. Soil-water content was recorded with a neutron probe till 105 cm depth and runoff by means of a cemented gutter directing runoff water with a multi-pipe divisor into a collector drum. WSC techniques proved to significantly reduce runoff (blue water) with overall runoff coefficients beings reduced from 25% (control practice) to 5-10%. Consequently, significantly more water was stored inside the catchments of the zaï pits and demi-lunes (green water). With the scarification treatment, no considerable differences in soil-water storage were found with the control. On the other hand, WSC practices had little impact on soil evaporation, which was only 12% of rainfall by the self-mulching soil. Crop transpiration increased with WSC and highest millet yields were found with zaï pits (4 to 5 times higher than under the fertilized control). Although rainwater was better partitioned in case of demi-lune microcatchments resulting in highest amounts of water stored in the soil, yield was only 40-60% of that with zaï pits. This was due to a higher plant density within each demi-lune microcatchment in an attempt to attain similar plant

  4. Uncertainty analysis of gross primary production partitioned from net ecosystem exchange measurements

    NASA Astrophysics Data System (ADS)

    Raj, R.; Hamm, N. A. S.; van der Tol, C.; Stein, A.

    2015-08-01

    Gross primary production (GPP), separated from flux tower measurements of net ecosystem exchange (NEE) of CO2, is used increasingly to validate process-based simulators and remote sensing-derived estimates of simulated GPP at various time steps. Proper validation should include the uncertainty associated with this separation at different time steps. This can be achieved by using a Bayesian framework. In this study, we estimated the uncertainty in GPP at half hourly time steps. We used a non-rectangular hyperbola (NRH) model to separate GPP from flux tower measurements of NEE at the Speulderbos forest site, The Netherlands. The NRH model included the variables that influence GPP, in particular radiation, and temperature. In addition, the NRH model provided a robust empirical relationship between radiation and GPP by including the degree of curvature of the light response curve. Parameters of the NRH model were fitted to the measured NEE data for every 10-day period during the growing season (April to October) in 2009. Adopting a Bayesian approach, we defined the prior distribution of each NRH parameter. Markov chain Monte Carlo (MCMC) simulation was used to update the prior distribution of each NRH parameter. This allowed us to estimate the uncertainty in the separated GPP at half-hourly time steps. This yielded the posterior distribution of GPP at each half hour and allowed the quantification of uncertainty. The time series of posterior distributions thus obtained allowed us to estimate the uncertainty at daily time steps. We compared the informative with non-informative prior distributions of the NRH parameters. The results showed that both choices of prior produced similar posterior distributions GPP. This will provide relevant and important information for the validation of process-based simulators in the future. Furthermore, the obtained posterior distributions of NEE and the NRH parameters are of interest for a range of applications.

  5. Partitioning of fission products from irradiated nitride fuel using inductive vaporization

    SciTech Connect

    Shcherbina, N.; Kulik, D.A.; Kivel, N.; Potthast, H.D.; Guenther-Leopold, I.

    2013-07-01

    Irradiated nitride fuel (Pu{sub 0.3}Zr{sub 0.7})N fabricated at PSI in frame of the CONFIRM project and having a burn-up of 10.4 % FIMA (Fission per Initial Metal Atom) has been investigated by means of inductive vaporization. The study of thermal stability and release behavior of Pu, Am, Zr and fission products (FPs) was performed in a wide temperature range (up to 2300 C. degrees) and on different redox conditions. On-line monitoring by ICP-MS detected low nitride stability and significant loss of Pu and Am at T>1900 C. degrees during annealing under inert atmosphere (Ar). The oxidative pre-treatment of nitride fuel on air at 1000 C. degrees resulted in strong retention of Pu and Am in the solid, as well as of most FPs. Thermodynamic modelling of elemental speciation using GEM-Selektor v.3 code (Gibbs Energy Minimization Selektor), supported by a comprehensive literature review on thermodynamics of actinides and FPs, revealed a number of binary compounds of Cs, Mo, Te, Sr and Ba to occur in the solid. Speciation of some FPs in the fuel is discussed and compared to earlier results of electron probe microanalysis (EPMA). Predominant vapor species predicted by GEM-Selektor calculations were Pu(g), Am(g) and N{sub 2}. Nitrogen can be completely released from the fuel after complete oxidation at 1000 C. degrees. With regard to the irradiated nitride reprocessing technology, this result can have an important practical application as an alternative way for {sup 15}N recovery. (authors)

  6. Uncertainty analysis of gross primary production partitioned from net ecosystem exchange measurements

    NASA Astrophysics Data System (ADS)

    Raj, Rahul; Hamm, Nicholas Alexander Samuel; van der Tol, Christiaan; Stein, Alfred

    2016-03-01

    Gross primary production (GPP) can be separated from flux tower measurements of net ecosystem exchange (NEE) of CO2. This is used increasingly to validate process-based simulators and remote-sensing-derived estimates of simulated GPP at various time steps. Proper validation includes the uncertainty associated with this separation. In this study, uncertainty assessment was done in a Bayesian framework. It was applied to data from the Speulderbos forest site, The Netherlands. We estimated the uncertainty in GPP at half-hourly time steps, using a non-rectangular hyperbola (NRH) model for its separation from the flux tower measurements. The NRH model provides a robust empirical relationship between radiation and GPP. It includes the degree of curvature of the light response curve, radiation and temperature. Parameters of the NRH model were fitted to the measured NEE data for every 10-day period during the growing season (April to October) in 2009. We defined the prior distribution of each NRH parameter and used Markov chain Monte Carlo (MCMC) simulation to estimate the uncertainty in the separated GPP from the posterior distribution at half-hourly time steps. This time series also allowed us to estimate the uncertainty at daily time steps. We compared the informative with the non-informative prior distributions of the NRH parameters and found that both choices produced similar posterior distributions of GPP. This will provide relevant and important information for the validation of process-based simulators in the future. Furthermore, the obtained posterior distributions of NEE and the NRH parameters are of interest for a range of applications.

  7. Partitioning of selected trace elements in coal combustion products from two coal-burning power plants in the United States

    USGS Publications Warehouse

    Swanson, Sharon M.; Engle, Mark A.; Ruppert, Leslie F.; Affolter, Ronald H.; Jones, Kevin B.

    2013-01-01

    Samples of feed coal (FC), bottom ash (BA), economizer fly ash (EFA), and fly ash (FA) were collected from power plants in the Central Appalachian basin and Colorado Plateau to determine the partitioning of As, Cr, Hg, Pb, and Se in coal combustion products (CCPs). The Appalachian plant burns a high-sulfur (about 3.9 wt.%) bituminous coal from the Upper Pennsylvanian Pittsburgh coal bed and operates with electrostatic precipitators (ESPs), with flue gas temperatures of about 163 °C in the ESPs. At this plant, As, Pb, Hg, and Se have the greatest median concentrations in FA samples, compared to BA and EFA. A mass balance (not including the FGD process) suggests that the following percentages of trace elements are captured in FA: As (48%), Cr (58%), Pb (54%), Se (20%), and Hg (2%). The relatively high temperatures of the flue gas in the ESPs and low amounts of unburned C in FA (0.5% loss-on-ignition for FA) may have led to the low amount of Hg captured in FA. The Colorado Plateau plant burns a blend of three low-S (about 0.74 wt.%) bituminous coals from the Upper Cretaceous Fruitland Formation and operates with fabric filters (FFs). Flue gas temperatures in the baghouses are about 104 °C. The elements As, Cr, Pb, Hg, and Se have the greatest median concentrations in the fine-grained fly ash product (FAP) produced by cyclone separators, compared to the other CCPs at this plant. The median concentration of Hg in FA (0.0983 ppm) at the Colorado Plateau plant is significantly higher than that for the Appalachian plant (0.0315 ppm); this higher concentration is related to the efficiency of FFs in Hg capture, the relatively low temperatures of flue gas in the baghouses (particularly in downstream compartments), and the amount of unburned C in FA (0.29% loss-on-ignition for FA).

  8. Partitioning of heat production in growing pigs as a tool to improve the determination of efficiency of energy utilization

    PubMed Central

    Labussière, Etienne; Dubois, Serge; van Milgen, Jaap; Noblet, Jean

    2013-01-01

    In growing pigs, the feed cost accounts for more than 60% of total production costs. The determination of efficiency of energy utilization through calorimetry measurements is of importance to sustain suitable feeding practice. The objective of this paper is to describe a methodology to correct daily heat production (HP) obtained from measurements in respiration chamber for the difference in energy expenditure related to physical activity between animals. The calculation is based on a preliminary published approach for partitioning HP between HP due to physical activity (AHP), thermic effect of feeding (TEF) and basal metabolic rate (fasting HP; FHP). Measurements with male growing pigs [mean body weight (BW): 115 kg] which were surgically castrated (SC), castrated through immunization against GnRH (IC), or kept as entire male (EM) were used as an example. Animals were fed the same diet ad-libitum and were housed individually in two 12-m3 open-circuit respiration chambers during 6 days when fed ad-libitum and one supplementary day when fasted. Physical activity was recorded through interruption of an infrared beam to detect standing and lying positions and with force transducers that recorded the mechanical force the animal exerted on the floor of the cage. Corrected AHP (AHPc), TEF (TEFc), and HP (HPc) were calculated to standardize the level of AHP between animals, assuming that the ratio between AHPc and ME intake should be constant. Inefficiency of energy utilization (sum of AHPc and TEFc) was lower than the inefficiency estimated from the slope of the classical relationship between HPc and ME intake but was associated with higher requirements for maintenance. Results indicate that EM pigs had higher FHP but lower TEFc than IC and SC pigs. These results agree with the higher contents in viscera of EM pigs that stimulate their basal metabolic rate and with the reduced utilization of dietary protein to provide energy for maintenance energy requirements and fat

  9. Biopolymer Production Kinetics of Mixed Culture Using Wastewater Sludge as a Raw Material and the Effect of Different Cations on Biopolymer Applications in Water and Wastewater Treatment.

    PubMed

    More, T T; Yan, S; Tyagi, R D; Surampalli, R Y

    2016-05-01

    Thirteen extracellular polymeric substances (EPS) producing bacterial strains were cultivated (as mixed culture) in the sterilized sludge (suspended solids of 25 g/L) and the batch fermentation was carried out. Mixed culture revealed a high specific growth rate of 0.35/hr. The EPS production rate was higher up to 24 hours, which gradually decreased with further incubation. The kinetic estimates demonstrated growth-associated EPS production. Broth EPS revealed higher flocculation activity when combined with different cations (Ca(2+), Mg(2+), Fe(3+), and Al(3+)) in river water (≥90%), municipal wastewater (≥90%), and brewery wastewater (≥80%), respectively. A low dose (5 to 40 mg/L) of trivalent cations was required to achieve higher flocculation compared to the divalent cations (50 to 250 mg/L). Flocculation performance of EPS was comparable to Magnafloc-155 (chemical polymer) and, hence, it could be used as a flocculant. PMID:27131306

  10. Product Vectors in the Ranges of Multi-Partite States with Positive Partial Transposes and Permanents of Matrices

    NASA Astrophysics Data System (ADS)

    Kiem, Young-Hoon; Kye, Seung-Hyeok; Na, Joohan

    2015-09-01

    In this paper, we consider a system of homogeneous algebraic equations in complex variables and their conjugates, which arise naturally from the range criterion for separability of PPT states. We examine systematically these equations to get sufficient conditions for the existence of nontrivial solutions. This gives us possible upper bounds of ranks of PPT entangled edge states and their partial transposes. We will focus on the multi-partite cases, which are much more delicate than the bi-partite cases. We use the notion of permanents of matrices as well as techniques from algebraic geometry through the discussion.

  11. Gamma-aminobutyric acid production using immobilized glutamate decarboxylase followed by downstream processing with cation exchange chromatography.

    PubMed

    Lee, Seungwoon; Ahn, Jungoh; Kim, Yeon-Gu; Jung, Joon-Ki; Lee, Hongweon; Lee, Eun Gyo

    2013-01-01

    We have developed a gamma-aminobutyric acid (GABA) production technique using his-tag mediated immobilization of Escherichia coli-derived glutamate decarboxylase (GAD), an enzyme that catalyzes the conversion of glutamate to GABA. The GAD was obtained at 1.43 g/L from GAD-overexpressed E. coli fermentation and consisted of 59.7% monomer, 29.2% dimer and 2.3% tetramer with a 97.6% soluble form of the total GAD. The harvested GAD was immobilized to metal affinity gel with an immobilization yield of 92%. Based on an investigation of specific enzyme activity and reaction characteristics, glutamic acid (GA) was chosen over monosodium glutamate (MSG) as a substrate for immobilized GAD, resulting in conversion of 2.17 M GABA in a 1 L reactor within 100 min. The immobilized enzymes retained 58.1% of their initial activities after ten consecutive uses. By using cation exchange chromatography followed by enzymatic conversion, GABA was separated from the residual substrate and leached GAD. As a consequence, the glutamic acid was mostly removed with no detectable GAD, while 91.2% of GABA was yielded in the purification step. PMID:23322022

  12. Heterologous production and functional and thermodynamic characterization of cation diffusion facilitator (CDF) transporters of mesophilic and hyperthermophilic origin.

    PubMed

    Goswami, Devrishi; Kaur, Jagdeep; Surade, Sachin; Grell, Ernst; Michel, Hartmut

    2012-07-01

    The members of the cation diffusion facilitator (CDF) family transport heavy metal ions and play an important function in zinc ion homeostasis of the cell. A recent structure of an Escherichia coli CDF transporter protein YiiP has revealed its dimeric nature and autoregulatory zinc transport mechanism. Here, we report the cloning and heterologous production of four different CDF transporters, two each from the pathogenic mesophilic bacterium Salmonella typhimurium and from the hyperthermophilic bacterium Aquifex aeolicus, in E. coli host cells. STM0758 of S. typhimurium was able to restore resistance to zinc ions when tested by complementation assays in the zinc-sensitive GG48 strain. Furthermore, copurification of bicistronically produced STM0758 and cross-linking experiments with the purified protein have revealed its possible oligomeric nature. The interaction between heavy metal ions and Aq_2073 of A. aeolicus was investigated by titration calorimetry. The entropy-driven, high-affinity binding of two Cd2+ and two Zn2+ per protein monomer with Kd values of around 100 nm and 1 μm, respectively, was observed. In addition, at least one more Zn2+ can be bound per monomer with low affinity. This low-affinity site is likely to possess a functional role contributing to Zn2+ transport across membranes. PMID:22944666

  13. A continuous process for biodiesel production in a fixed bed reactor packed with cation-exchange resin as heterogeneous catalyst.

    PubMed

    Feng, Yaohui; Zhang, Aiqing; Li, Jianxin; He, Benqiao

    2011-02-01

    Continuous esterification of free fatty acids (FFA) from acidified oil with methanol was carried out with NKC-9 cation-exchange resin in a fixed bed reactor with an internal diameter of 25 mm and a height of 450 mm to produce biodiesel. The results showed that the FFA conversion increased with increases in methanol/oil mass ratio, reaction temperature and catalyst bed height, whereas decreased with increases in initial water content in feedstock and feed flow rate. The FFA conversion kept over 98.0% during 500 h of continuous esterification processes under 2.8:1 methanol to oleic acid mass ratio, 44.0 cm catalyst bed height, 0.62 ml/min feed flow rate and 65°C reaction temperature, showing a much high conversion and operational stability. Furthermore, the loss of sulfonic acid groups from NKC-9 resin into the production was not found during continuous esterification. In sum, NKC-9 resin shows the potential commercial applications to esterification of FFA. PMID:21078550

  14. Ion-neutral collisional cross sections of carbohydrate isomers as divalent cation adducts and their electron transfer products.

    PubMed

    Huang, Yuting; Dodds, Eric D

    2015-10-21

    As the gravity of glycoscience continues to amass, a commensurate demand for rapid, sensitive, and structurally comprehensive glycoanalytical tools has arisen. Among the most elusive but desirable analytical capabilities is the ability to expeditiously and unambiguously detect, distinguish, and resolve carbohydrates that differ only in their constitutional isomerism and/or stereoisomerism. While ion mobility spectrometry (IMS) has proven a highly promising tool for such analyses, the facility of this method to discriminate larger oligosaccharides is still somewhat limited. In an effort to expand the capabilities of IMS to discriminate among carbohydrate isomers, the present investigation was focused on IMS studies of four trisaccharide isomers, four pentasaccharide isomers, and two hexasaccharide isomers, each as group II metal ion adducts and their corresponding gas-phase electron transfer (ET) products. These studies were also evaluated in the context of previously investigated group I metal ion adducts of the same saccharides. The orientationally averaged ion-neutral collisional cross sections (CCSs) of the various carbohydrate/metal ion adducts were found to be dependent on the structures of specific carbohydrate isomers, sensitive to the electronic characteristics of the bound cation, and responsive to the attachment of an additional electron (in the case of divalent metal ion adducts). Overall, these results underscore the utility of metal ions for probing carbohydrate structure in concert with IMS, and the capacity of gas-phase ion chemistry to expand the menu of such probes. PMID:26225371

  15. Estimation of evapotranspiration and its partition based on an extended three-temperature model and MODIS products

    NASA Astrophysics Data System (ADS)

    Tian, Fei; Qiu, GuoYu; Yang, YongHui; Lü, YiHe; Xiong, Yujiu

    2013-08-01

    Evapotranspiration (ET) is an energy balance component and a key component of water budget; thus, accurate estimates of ET are critical for understanding hydrological processes and water resources management. Despite growing concerns, challenges remain in estimating ET by remote sensing technology for regional applications, due to the difficulty in determination of aerodynamic, canopy and soil resistance. Instead of using resistance, ET and their partition of evaporation (Es) and transpiration (Ec) can be evaluated based on an extended three temperature model (3T model) and Moderate Resolution Imaging Spectroradiometer (MODIS) products for the period of 2001-2009. A case study was conducted in the Heihe River Basin in northwestern China. Validation results indicated that the mean absolute error was 0.08 mm/d, with a maximum and minimum absolute error of 1.28 mm/d and 0.02 mm/d, respectively, which presented a simple extended 3T model in estimating ET with adequate accuracy and could satisfy regional research requirement at large scales. Results showed that: (1) seasonally, ET was highest (varied from 0.80 mm/d to 1.27 mm/d with a mean value of 1.05 mm/d) in summer and lowest in winter (varied from 0.35 mm/d to 0.44 mm/d with a mean value of 0.37 mm/d); (2) spatially, it rendered a decrease from the Qilian Mountain of the upper reaches (515 mm/a) to the Gobi desert of the lower reaches (82 mm/a), which was closely related to land covers and climate conditions; (3) the comparison of different ecosystems indicated that forest has the highest ET (588 mm), followed by grassland (308 mm), farmland (225 mm), and desert land (160 mm); (4) ET was separated into Es and Ec, and about 38-72% soil water returned to the atmosphere in the form of Es. This information will prove to be useful for water-use efficiency of the Ecological Water Conveyances Project (EWCP) conducted in the basin.

  16. Development of high-productivity, strong cation-exchange adsorbers for protein capture by graft polymerization from membranes with different pore sizes

    PubMed Central

    Chenette, Heather C.S.; Robinson, Julie R.; Hobley, Eboni; Husson, Scott M.

    2012-01-01

    This paper describes the surface modification of macroporous membranes using ATRP (atom transfer radical polymerization) to create cation-exchange adsorbers with high protein binding capacity at high product throughput. The work is motivated by the need for a more economical and rapid capture step in downstream processing of protein therapeutics. Membranes with three reported nominal pore sizes (0.2, 0.45, 1.0 μm) were modified with poly(3-sulfopropyl methacrylate, potassium salt) tentacles, to create a high density of protein binding sites. A special formulation was used in which the monomer was protected by a crown ether to enable surface-initiated ATRP of this cationic polyelectrolyte. Success with modification was supported by chemical analysis using Fourier-transform infrared spectroscopy and indirectly by measurement of pure water flux as a function of polymerization time. Uniformity of modification within the membranes was visualized with confocal laser scanning microscopy. Static and dynamic binding capacities were measured using lysozyme protein to allow comparisons with reported performance data for commercial cation-exchange materials. Dynamic binding capacities were measured for flow rates ranging from 13 to 109 column volumes (CV)/min. Results show that this unique ATRP formulation can be used to fabricate cation-exchange membrane adsorbers with dynamic binding capacities as high as 70 mg/mL at a throughput of 100 CV/min and unprecedented productivity of 300 mg/mL/min. PMID:23175597

  17. Partitioning of divalent transition elements between octahedral sheets of trioctahedral smectites and water

    NASA Astrophysics Data System (ADS)

    Decarreau, Alain

    1985-07-01

    Using trioctahedral smectites synthesized at low temperature (25 and 75°C). partition coefficients have been determined for M2+ transition metals (Mn, Fe, Co, Ni, Cu, Zn) between octahedral sheets of smectites and water. These coefficients D( M2+- Mg) = ( M2+)/( Mg) solid/( M2+)/( Mg) liquid have high values near 10 4 for Cu, 1000 for Ni, Co, Zn, 300 for Fe and 30 for Mn. All transition metals are strongly stabilized in the magnesian solid phase, even Mn which leads to noncrystallized products. Within the range of experimental uncertainties, it is found that tetrahedral substitution of Si by Al and differences in temperature (from 25 to 75°C) have no influence on partition coefficients. Experimental data are closely related to thermodynamic properties of the cations and on this basis other partition coefficients can be calculated, for the ( M2+ - Fe2+) pair for instance. The behaviour of transition metals is explained using crystal field theory.

  18. Austenite stabilization and high strength-elongation product of a low silicon aluminum-free hot-rolled directly quenched and dynamically partitioned steel

    SciTech Connect

    Tan, Xiao-Dong; Xu, Yun-Bo; Yang, Xiao-Long; Hu, Zhi-Ping; Peng, Fei; Ju, Xiao-Wei; Wu, Di

    2015-06-15

    Microstructures composed of lath martensite and retained austenite with volume fraction between 8.0 vol.% and 12.0 vol.% were obtained in a low-C low-Si Al-free steel through hot-rolling direct quenching and dynamical partitioning (HDQ&DP) processes. The austenite stabilization mechanism in the low-C low-Si Al-free steel under the special dynamical partitioning processes is investigated by analyzing the carbon partition behavior from martensite to austenite and the carbide precipitation-coarsening behavior in martensite laths combining with the possible hot rolling deformation inheritance. Results show that the satisfying retained austenite amount in currently studied low-Si Al-free HDQ&DP steel is caused by the high-efficiency carbon enrichment in the 30–80 nm thick regions of austenite near the interfaces in the hot-rolled ultra-fast cooled structure and the avoidance of serious carbides coarsening during the continuous cooling procedures. The excellent strength-elongation product reaching up to 26,000 MPa% shows that the involved HDQ&DP process is a promising method to develop a new generation of advanced high strength steel. - Highlights: • HDQ&DP processes were applied to a low-C low-Si Al-free steel. • Effective partitioning time during the continuous cooling processes is 1–220 s. • Retained austenite with volume fraction between 8.0 vol. % and 12.0 vol. % has been obtained. • The special austenite stabilization mechanism has been expounded.

  19. Production and characterization of O/W emulsions containing cationic droplets stabilized by lecithin-chitosan membranes.

    PubMed

    Ogawa, Satoshi; Decker, Eric A; McClements, D Julian

    2003-04-23

    Oil-in-water emulsions containing cationic droplets stabilized by lecithin-chitosan membranes were produced using a two-stage process. A primary emulsion was prepared by homogenizing 5 wt % corn oil with 95 wt % aqueous solution (1 wt % lecithin, 100 mM acetic acid, pH 3.0) using a high-pressure valve homogenizer. This emulsion was diluted with aqueous chitosan solutions to form secondary emulsions with varying compositions: 1 wt % corn oil, 0.2 wt % lecithin, 100 mM acetic acid, and 0-0.04 wt % chitosan (pH 3.0). The particle size distribution, particle charge, and creaming stability of the primary and secondary emulsions were measured. The electrical charge on the droplets increased from -49 to +54 mV as the chitosan concentration was increased from 0 to 0.04 wt %, which indicated that chitosan adsorbed to the droplet surfaces. The mean particle diameter of the emulsions increased dramatically and the emulsions became unstable to creaming when the chitosan concentration exceeded 0.008 wt %, which was attributed to charge neutralization and bridging flocculation effects. Sonication, blending, or homogenization could be used to disrupt flocs formed in secondary emulsions containing droplets with high positive charges, leading to the production of emulsions with relatively small particle diameters (approximately 1 microm). These emulsions had good stability to droplet aggregation at low pH (< or =5) and ionic strengths (<500 mM). The interfacial engineering technology utilized in this study could lead to the creation of food emulsions with improved stability to environmental stresses. PMID:12696977

  20. Cationic electrodepositable coating composition comprising lignin

    DOEpatents

    Fenn, David; Bowman, Mark P; Zawacky, Steven R; Van Buskirk, Ellor J; Kamarchik, Peter

    2013-07-30

    A cationic electrodepositable coating composition is disclosed. The present invention in directed to a cationic electrodepositable coating composition comprising a lignin-containing cationic salt resin, that comprises (A) the reaction product of: lignin, an amine, and a carbonyl compound; (B) the reaction product of lignin, epichlorohydrin, and an amine; or (C) combinations thereof.

  1. Effect of cation-exchange pretreatment of aqueous soil extracts on the gas chromatographic-mass spectrometric determination of nerve agent hydrolysis products after tert.-butyldimethylsilylation.

    PubMed

    Kataoka, M; Tsunoda, N; Ohta, H; Tsuge, K; Takesako, H; Seto, Y

    1998-10-23

    The efficiency of pretreatment of aqueous soil extracts using a cation-exchange resin has been investigated by gas chromatographic-mass spectrometric (GC-MS) determination of nerve agent hydrolysis products after tert.-butyldimethylsilyl (TBDMS) derivatization. An aqueous solution containing methylphosphonic acid (MPA) and its monoalkyl esters, ethyl methylphosphonic acid, isopropyl methylphosphonic acid and pinacolyl methylphosphonic acid, was dried, and these phosphonic acids were derivatized with N-methyl-N-(tert.-butyldimethylsilyl)trifluoro-acetamide and analyzed by GC-MS. The yields of TBDMS derivatives were significantly decreased by the addition of calcium and magnesium ions to an aqueous solution (approximately 0.5 mM) before derivatization. The extent of lowered yields was related to the hydrophilicity of phosphonic acids. MPA and its monoalkyl esters were spiked into soil samples (sand, alluvial soil and volcanic ash soil), extracted with distilled water, dried, silylated and applied to GC-MS. The yields of TBDMS derivatives of monoalkyl esters from soil samples were low (3-42%) and MPA derivative was scarcely detected (yield: < 0.7%). By desalting the aqueous soil extract by passage through a strong cation-exchange resin, the yields of TBDMS derivatives of monoalkyl esters were significantly improved (12-69%) and MPA derivative was detected (yield: 2-36%). The extent of improved yields was related to the concentrations of divalent metal cations in aqueous soil extracts. In combination with desalting by the cation-exchange resin, GC-MS after TBDMS derivatization enables detection of nerve agent hydrolysis products in soils at sub-ppm (0.2 microgram/g) concentrations. PMID:9818434

  2. Experimental determination of the partitioning coefficient and volatility of important BVOC oxidation products using the Aerosol Collection Module (ACM) coupled to a PTR-ToF-MS

    NASA Astrophysics Data System (ADS)

    Gkatzelis, G.; Hohaus, T.; Tillmann, R.; Schmitt, S. H.; Yu, Z.; Schlag, P.; Wegener, R.; Kaminski, M.; Kiendler-Scharr, A.

    2015-12-01

    Atmospheric aerosol can alter the Earth's radiative budget and global climate but can also affect human health. A dominant contributor to the submicrometer particulate matter (PM) is organic aerosol (OA). OA can be either directly emitted through e.g. combustion processes (primary OA) or formed through the oxidation of organic gases (secondary organic aerosol, SOA). A detailed understanding of SOA formation is of importance as it constitutes a major contribution to the total OA. The partitioning between the gas and particle phase as well as the volatility of individual components of SOA is yet poorly understood adding uncertainties and thus complicating climate modelling. In this work, a new experimental methodology was used for compound-specific analysis of organic aerosol. The Aerosol Collection Module (ACM) is a newly developed instrument that deploys an aerodynamic lens to separate the gas and particle phase of an aerosol. The particle phase is directed to a cooled sampling surface. After collection particles are thermally desorbed and transferred to a detector for further analysis. In the present work, the ACM was coupled to a Proton Transfer Reaction-Time of Flight-Mass Spectrometer (PTR-ToF-MS) to detect and quantify organic compounds partitioning between the gas and particle phase. This experimental approach was used in a set of experiments at the atmosphere simulation chamber SAPHIR to investigate SOA formation. Ozone oxidation with subsequent photochemical aging of β-pinene, limonene and real plant emissions from Pinus sylvestris (Scots pine) were studied. Simultaneous measurement of the gas and particle phase using the ACM-PTR-ToF-MS allows to report partitioning coefficients of important BVOC oxidation products. Additionally, volatility trends and changes of the SOA with photochemical aging are investigated and compared for all systems studied.

  3. Evaluating dissolved organic carbon-water partitioning using polyparameter linear free energy relationships: Implications for the fate of disinfection by-products.

    PubMed

    Neale, Peta A; Escher, Beate I; Goss, Kai-Uwe; Endo, Satoshi

    2012-07-01

    The partitioning of micropollutants to dissolved organic carbon (DOC) can influence their toxicity, degradation, and transport in aquatic systems. In this study carbon-normalized DOC-water partition coefficients (K(DOC-w)) were measured for a range of non-polar and polar compounds with Suwannee River fulvic acid (FA) using headspace and solid-phase microextraction (SPME) methods. The studied chemicals were selected to represent a range of properties including van der Waal forces, cavity formation and hydrogen bonding interactions. The K(DOC-w) values were used to calibrate a polyparameter linear free energy relationship (pp-LFER). The difference between experimental and pp-LFER calculated K(DOC-w) values was generally less than 0.3 log units, indicating that the calibrated pp-LFER could provide a good indication of micropollutant interaction with FA, though statistical analysis suggested that more data would improve the predictive capacity of the model. A pp-LFER was also calibrated for Aldrich humic acid (HA) using K(DOC-w) values collected from the literature. Both experimental and pp-LFER calculated K(DOC-w) values for Aldrich HA were around one order of magnitude greater than Suwannee River FA. This difference can be explained by the higher cavity formation energy in Suwannee River FA. Experimental and pp-LFER calculated K(DOC-w) values were compared for halogenated alkanes and alkenes, including trihalomethane disinfection by-products, with good agreement between the two approaches. Experimental and calculated values show that DOC-water partitioning is generally low; indicating that sorption to DOC is not an important fate process for these chemicals in the environment. PMID:22542133

  4. Biomass production, forage quality, and cation uptake of Quail bush, four-wing saltbush, and seaside barley irrigated with moderately saline-sodic water

    SciTech Connect

    Bauder, J.W.; Browning, L.S.; Phelps, S.D.; Kirkpatrick, A.D.

    2008-07-01

    The study reported here investigated capacity of Atriplex lentiformis (Torr.) S. Wats. (Quail bush), Atriplex X aptera A. Nels. (pro sp.) (Wytana four-wing saltbush), and Hordeum marinum Huds. (seaside barley) to produce biomass and crude protein and take up cations when irrigated with moderately saline-sodic water, in the presence of a shallow water table. Water tables were established at 0.38, 0.76, and 1.14m below the surface in sand-filled columns. The columns were then planted to the study species. Study plants were irrigated for 224 days; irrigation water was supplied every 7 days equal to water lost to evapotranspiration (ET) plus 100mL (the volume of water removed in the most previous soil solution sampling). Water representing one of two irrigation sources was used: Powder River (PR) or coalbed natural gas (CBNG) wastewater. Biomass production did not differ significantly between water quality treatments but did differ significantly among species and water table depth within species. Averaged across water quality treatments, Hordeum marinum produced 79% more biomass than A. lentiformis and 122% more biomass than Atriplex X aptera, but contained only 11% crude protein compared to 16% crude protein in A. lentiformis and 14% crude protein in Atriplex X aptera. Atriplex spp. grown in columns with the water table at 0.38m depth produced more biomass, took up less calcium on a percentage basis, and took up more sodium on a percentage basis than when grown with the water table at a deeper depth. Uptake of cations by Atriplex lentiformis was approximately twice the uptake of cations by Atriplex X aptera and three times that of H. marinum. After 224 days of irrigation, crop growth, and cation uptake, followed by biomass harvest, EC and SAR of shallow groundwater in columns planted to A. lentiformis were less than EC and SAR of shallow ground water in columns planted to either of the other species.

  5. Ecosystem carbon partitioning: aboveground net primary productivity correlates with the root carbon input in different land use types of Southern Alps

    NASA Astrophysics Data System (ADS)

    Rodeghiero, Mirco; Martinez, Cristina; Gianelle, Damiano; Camin, Federica; Zanotelli, Damiano; Magnani, Federico

    2013-04-01

    Terrestrial plant carbon partitioning to above- and below-ground compartments can be better understood by integrating studies on biomass allocation and estimates of root carbon input based on the use of stable isotopes. These experiments are essential to model ecosystem's metabolism and predict the effects of global change on carbon cycling. Using in-growth soil cores in conjunction with the 13C natural abundance method we quantified net plant-derived root carbon input into the soil, which has been pointed out as the main unaccounted NPP (net primary productivity) component. Four land use types located in the Trentino Region (northern Italy) and representing a range of aboveground net primary productivity (ANPP) values (155-868 gC m-2 y-1) were investigated: conifer forest, apple orchard, vineyard and grassland. Cores, filled with soil of a known C4 isotopic signature were inserted at 18 sampling points for each site and left in place for twelve months. After extraction, cores were analysed for %C and d13C, which were used to calculate the proportion of new plant-derived root C input by applying a mass balance equation. The GPP (gross primary productivity) of each ecosystem was determined by the eddy covariance technique whereas ANPP was quantified with a repeated inventory approach. We found a strong and significant relationship (R2 = 0.93; p=0.03) between ANPP and the fraction of GPP transferred to the soil as root C input across the investigated sites. This percentage varied between 10 and 25% of GPP with the grassland having the lowest value and the apple orchard the highest. Mechanistic ecosystem carbon balance models could benefit from this general relationship since ANPP is routinely and easily measured at many sites. This result also suggests that by quantifying site-specific ANPP, root carbon input can be reliably estimated, as opposed to using arbitrary root/shoot ratios which may under- or over-estimate C partitioning.

  6. Partitioning of actinides and fission products in highly-active raffinate from purex process by mixer-settlers

    SciTech Connect

    Ozawa, M.; Nemoto, S.; Togashi, A.; Kawata, T.; Onishi, K. )

    1992-12-01

    Batch, and counter-current flowsheet tests using mixer-settlers have been carried out in the chemical processing facility (CPF). Tokai-works, PNC. Counter-current experiments aim to provide the data for prediction of the Truex process applicability in actinides partitioning in high level liquid waste (HLLW) from the Purex process. Real highly-active (HA) raffinate from FBR spent fuel reprocessing experiments were used in these runs without adjusting the acidity. A mixed solvent composed of 0.2M CMPO in the purex solvent was employed as a Truex solvent. Some noteworthy behaviors for ruthenium were recognized; The rare earths and some fraction of ruthenium were coextracted to the actinides stream. Although they were stripped out by dilute nitric acid as expected, plutonium and some of ruthenium also remained in the organic phase during the stripping of americium. A peculiar extraction behavior of ruthenium of changing its D values stage by stage suggests a mixture of various kinds of complexes in the HA raffinate. A series of counter-current tests resulted in giving sufficiently low alpha contaminated waste giving DF's of over 10[sup 3] for major actinides separation, which will endorse the Truex process. In successive counter-current runs after 1992, an effort for the selective(Am/Np/Pu/U) stripping will be continued including the solvent cleanup step as one of the separation steps. 9 refs., 10 figs., 2 tabs.

  7. Demonstration of in situ product recovery of butyric acid via CO2 -facilitated pH swings and medium development in two-phase partitioning bioreactors.

    PubMed

    Peterson, Eric C; Daugulis, Andrew J

    2014-03-01

    Production of organic acids in solid-liquid two-phase partitioning bioreactors (TPPBs) is challenging, and highly pH-dependent, as cell growth occurs near neutral pH, while acid sorption occurs only at low pH conditions. CO2 sparging was used to achieve acidic pH swings, facilitating undissociated organic acid uptake without generating osmotic stress inherent in traditional acid/base pH control. A modified cultivation medium was formulated to permit greater pH reduction by CO2 sparging (pH 4.8) compared to typical media (pH 5.3), while still possessing adequate nutrients for extensive cell growth. In situ product recovery (ISPR) of butyric acid (pKa = 4.8) produced by Clostridium tyrobutyricum was achieved through intermittent CO2 sparging while recycling reactor contents through a column packed with absorptive polymer Hytrel® 3078. This polymer was selected on the basis of its composition as a polyether copolymer, and the use of solubility parameters for predicting solute polymer affinity, and was found to have a partition coefficient for butyric acid of 3. Total polymeric extraction of 3.2 g butyric acid with no CO2 mediated pH swings was increased to 4.5 g via CO2 -facilitated pH shifting, despite the buffering capacity of butyric acid, which resists pH shifting. This work shows that CO2 -mediated pH swings have an observable positive effect on organic acid extraction, with improvements well over 150% under optimal conditions in early stage fermentation compared to CO2 -free controls, and this technique can be applied other organic acid fermentations to achieve or improve ISPR. PMID:23996152

  8. Cations or Radicals? Inherent Reactivity of Biosynthetic Intermediates in the B-Ring Formation of Rotenoid Natural Products.

    PubMed

    Kirkpatrick, Adam K; Siebert, Matthew R

    2016-04-21

    Compounds of the rotenoid class are naturally occurring in the Leguminosae and Nyctaginacae families. Rotenoids have found a myriad of uses, for example, in the agricultural industry as an insecticide and piscicide, and as an anticancer therapeutic. The scientific literature questions whether cyclization of the rotenoid B-ring occurs via a pathway containing either cationic or free-radical intermediates. In this work, both propositions are analyzed using DFT (B3LYP and M06-2X) and the G3 composite method in gas- and (implicit) solution-phase. The accuracy of these methods is compared to several experimental C-H bond dissociation energies (BDEs). We find that of the methods surveyed M06-2X provides the most accurate BDEs. Further, there is a clear thermodynamic preference for the free-radical pathway. PMID:27014924

  9. Production of 4-valerolactone by an equilibrium-limited transformation in a partitioning bioreactor: impact of absorptive polymer properties.

    PubMed

    Dafoe, Julian T; Daugulis, Andrew J

    2014-03-01

    The biotransformation of levulinic acid to 4-valerolactone (4VL) is pH-dependent and equilibrium limited, distinct from the more common irreversible biotransformations that are constrained by product toxicity or biocatalyst inhibition. Our processing strategy for this system was to selectively remove the product, 4VL, which is in equilibrium with its precursor, 4-hydroxyvalerate (4HV), to pull the reaction to a greater extent of conversion. 4VL is challenging to separate from the aqueous phase due to its water miscibility, necessitating the use of water-absorbing polymers to provide affinity toward the hydrophilic product. Manipulating the composition of copolymers, thereby varying the architecture of polymer chains, conferred drastically different extents of water absorption and caused different biotransformation outcomes. A custom-synthesized random copolymer designed to maximize the proportion of material with affinity for the solute had high water uptake, which resulted in the poor selectivity for the target molecule relative to its precursor. Conversely, a moderately water-absorbing commercial segmented block copolymer, Hytrel(®) 8206, demonstrated selectivity toward 4VL relative to its precursor, 4HV, and increased 4VL production by approximately 30 % by shifting the equilibrium toward the product. This work has shown that water absorption is an important, previously neglected criterion in evaluating polymer affinity and selectivity toward hydrophilic target molecules. PMID:23907719

  10. Adaptation of Escherichia coli to elevated sodium concentrations increases cation tolerance and enables greater lactic acid production.

    PubMed

    Wu, Xianghao; Altman, Ronni; Eiteman, Mark A; Altman, Elliot

    2014-05-01

    Adaptive evolution was employed to generate sodium (Na(+))-tolerant mutants of Escherichia coli MG1655. Four mutants with elevated sodium tolerance, designated ALS1184, ALS1185, ALS1186, and ALS1187, were independently isolated after 73 days of serial transfer in medium containing progressively greater Na(+) concentrations. The isolates also showed increased tolerance of K(+), although this cation was not used for selective pressure. None of the adapted mutants showed increased tolerance to the nonionic osmolyte sucrose. Several physiological parameters of E. coli MG1655 and ALS1187, the isolate with the greatest Na(+) tolerance, were calculated and compared using glucose-limited chemostats. Genome sequencing showed that the ALS1187 isolate contained mutations in five genes, emrR, hfq, kil, rpsG, and sspA, all of which could potentially affect the ability of E. coli to tolerate Na(+). Two of these genes, hfq and sspA, are known to be involved in global regulatory processes that help cells endure a variety of cellular stresses. Pyruvate formate lyase knockouts were constructed in strains MG1655 and ALS1187 to determine whether increased Na(+) tolerance afforded increased anaerobic generation of lactate. In fed-batch fermentations, E. coli ALS1187 pflB generated 76.2 g/liter lactate compared to MG1655 pflB, which generated only 56.3 g/liter lactate. PMID:24584246

  11. Production, partitioning and stoichiometry of organic matter under variable nutrient supply during mesocosm experiments in the tropical Pacific and Atlantic Ocean

    NASA Astrophysics Data System (ADS)

    Franz, J. M. S.; Hauss, H.; Sommer, U.; Dittmar, T.; Riebesell, U.

    2012-11-01

    Oxygen-deficient waters in the ocean, generally referred to as oxygen minimum zones (OMZ), are expected to expand as a consequence of global climate change. Poor oxygenation is promoting microbial loss of inorganic nitrogen (N) and increasing release of sediment-bound phosphate (P) into the water column. These intermediate water masses, nutrient-loaded but with an N deficit relative to the canonical N:P Redfield ratio of 16:1, are transported via coastal upwelling into the euphotic zone. To test the impact of nutrient supply and nutrient stoichiometry on production, partitioning and elemental composition of dissolved (DOC, DON, DOP) and particulate (POC, PON, POP) organic matter, three nutrient enrichment experiments were conducted with natural microbial communities in shipboard mesocosms, during research cruises in the tropical waters of the southeast Pacific and the northeast Atlantic. Maximum accumulation of POC and PON was observed under high N supply conditions, indicating that primary production was controlled by N availability. The stoichiometry of microbial biomass was unaffected by nutrient N:P supply during exponential growth under nutrient saturation, while it was highly variable under conditions of nutrient limitation and closely correlated to the N:P supply ratio, although PON:POP of accumulated biomass generally exceeded the supply ratio. Microbial N:P composition was constrained by a general lower limit of 5:1. Channelling of assimilated P into DOP appears to be the mechanism responsible for the consistent offset of cellular stoichiometry relative to inorganic nutrient supply and nutrient drawdown, as DOP build-up was observed to intensify under decreasing N:P supply. Low nutrient N:P conditions in coastal upwelling areas overlying O2-deficient waters seem to represent a net source for DOP, which may stimulate growth of diazotrophic phytoplankton. These results demonstrate that microbial nutrient assimilation and partitioning of organic matter

  12. Production, partitioning and stoichiometry of organic matter under variable nutrient supply during mesocosm experiments in the tropical Pacific and Atlantic Ocean

    NASA Astrophysics Data System (ADS)

    Franz, J. M. S.; Hauss, H.; Sommer, U.; Dittmar, T.; Riebesell, U.

    2012-05-01

    Oxygen-deficient waters in the ocean, generally referred to as oxygen minimum zones (OMZ), are expected to expand as a consequence of global climate change. Poor oxygenation is promoting microbial loss of inorganic nitrogen (N) and increasing release of sediment-bound phosphate (P) into the water column. These intermediate water masses, nutrient-loaded but with an N deficit relative to the canonical N:P Redfield ratio of 16:1, are transported via coastal upwelling into the euphotic zone. To test the impact of nutrient supply and nutrient stoichiometry on production, partitioning and elemental composition of phytoplankton-derived dissolved (DOC, DON, DOP) and particulate (POC, PON, POP) organic matter, three nutrient enrichment experiments were conducted with natural phytoplankton communities in shipboard mesocosms, during research cruises in the tropical waters of the South East Pacific and the North East Atlantic. Maximum accumulation of POC and PON was observed under high N supply conditions, indicating that primary production was controlled by N availability. The stoichiometry of photoautotrophic biomass was unaffected by nutrient N:P supply during exponential growth under nutrient saturation, while it was highly variable under conditions of nutrient limitation and closely correlated to the N:P supply ratio, although PON:POP of accumulated phytoplankton generally exceeded the supply ratio. Phytoplankton N:P composition was constrained by a general lower limit of 5:1. Channelling of assimilated P into DOP appears to be the mechanism responsible for the consistent offset of cellular stoichiometry relative to inorganic nutrient supply and nutrient drawdown, as DOP build-up was observed to intensify under decreasing N:P supply. Low nutrient N:P conditions in coastal upwelling areas overlying O2-deficient waters seem to represent a net source for DOP, which may stimulate growth of diazotrophic phytoplankton. These results demonstrate that microalgal nutrient

  13. Chromatographic cation exchange separation of decigram quantities of californium and other transplutonium elements

    SciTech Connect

    Benker, D.E.; Chattin, F.R.; Collins, E.D.; Knauer, J.B.; Orr, P.B.; Ross, R.G.; Wiggins, J.T.

    1981-01-01

    Decigram quantities of highly radioactive transplutonium elements are routinely partitioned at TRU by chromatographic elution from cation resin using AHIB eluents. Batch runs containing up to 200 mg of /sup 252/Cf can be made in about 5 h (2 h to load the feed and 3 h for the elution), with two high-pressure ion exchange columns, a small one for the initial loading of the feed and a large one for the elution. The separations achieved in the column are preserved by routing the column effluent through an alpha detector and using the response from the detector to select appropriate product fractions. The high-pressure ion exchange process has been reliable and relatively easy to operate; therefore it will continue to be used for partitioning transplutonium elements at TRU. 3 figures, 1 table.

  14. Chromatographic cation exchange separation of decigram quantities of californium and other transplutonium elements

    SciTech Connect

    Benker, D.E.; Chattin, F.R.; Collins, E.D.; Knauer, J.B.; Orr, P.B.; Ross, R.G.; Wiggins, J.T.

    1980-01-01

    Decigram quantities of highly radioactive transplutonium elements are routinely partitioned at TRU by chromatographic elution from cation resin using AHIB eluent. By using two high-pressure ion exchange columns, a small one for the initial loading of the feed and a large one for the elution, batch runs containing up to 200 mg of /sup 252/Cf can be made in about 5 hours (2 hours to load the feed and 3 hours for the elution). The number of effluent product fractions and the amount of actinides that must be collected in intermediate fractions are minimized by monitoring response from a flow-through alpha-detector. This process has been reliable and relatively easy to operate, and will continue to be used for partitioning transplutonium elements at TRU.

  15. A theoretical study of three gas-phase reactions involving the production or loss of methane cations.

    PubMed

    Baptista, Leonardo; da Silveira, Enio F

    2014-10-21

    Hydrocarbon ions are important species in flames, spectroscopy and the interstellar medium. Their importance is reflected in the extensive body of literature on the structure and reactivity of carbocations. However, the geometry, electronic structure and reactivity of carbocations are difficult to assess. This study aims to contribute to the current knowledge of this subject by presenting a quantum mechanics description of methane cation dissociation using multiconfigurational methods. The geometric and electronic parameters of the minimum structure were determined for three main reaction paths: the dissociation CH4(+)→ CH2(+) + H2 and the dissociation-recombination processes CH4(+)↔ CH3(+) + H. The electronic and energetic effects of these reactions were analyzed, and it was found that each reaction path has a strong dependence on the methodology used as well as a strong multiconfigurational character during dissociation. The first doublet excited states are inner-shell excited states and may correspond to the ions that are expected to be formed after electron detachment. The rate coefficient for each reaction path was determined using variational transition state theory and RRKM/master equation calculations. The major dissociation paths, with their rate coefficients at the high-pressure limit, are CH4(+)(X(~)(2)B1) → CH3(+)(A(2)A1') + H((2)S) (k∞(T) = 1.42 × 10(+14) s(-1) exp(-37.12/RT)) and CH4(+)(X(~)(2)B1) → CH2(+)(A(2)A1) + H2((2)Σg(+)) (k∞(T) = 9.18 × 10(+14) s(-1) exp(-55.77/RT)). Our findings help to explain the abundance of ions formed from CH4 in the interstellar medium and to build models of chemical evolution. PMID:25200833

  16. Impacts of insect-related forest mortality on hydrologic partitioning and forest productivity in the Southern Rocky Mountains, USA

    NASA Astrophysics Data System (ADS)

    Molotch, N. P.

    2014-12-01

    Recent large-scale changes in forest cover over Western North America associated with insect-related forest mortality may have widespread impacts on water availability. These changes have potentially varied impacts on water availability as forest mortality influences rates of snow accumulation, snowmelt, and evapotranspiration. These changes may significantly alter runoff production and gross primary productivity in mountain forests. Analysis of remotely sensed vegetation greenness data indicate strong forest and understory growth dependencies associated with snow accumulation and snowmelt with peak snow water equivalent explaining 40-50% of inter-annual greenness variability in the Rocky Mountains. Examples of these dependencies will be presented based on the 2012 drought in the Southwestern US whereby near record low snow accumulation and record high potential evapotranspiration have resulted in record low forest greening as evident in the 30+ year satellite record. Forest response to aridity in 2012 was exacerbated by forest disturbance with greenness anomalies 90% greater in magnitude in Bark Beetle and Spruce Budworm affected areas versus undisturbed areas and 182% greater in magnitude in areas impacted by fire. Growing season length was inversely proportional to peak greenness with record high Normalized Difference Vegetation Index (NDVI) values in April (14% above average) corresponding with record low NDVI values in July (7% below average). Gross primary productivity (GPP) estimates from the Moderate Resolution Imaging Spectroradiometer (MODIS) and from the Niwot Ridge, Colorado Ameriflux tower indicate record high April GPP (30% and 90% above average for MODIS and the tower, respectively) correspodning with record low July GPP (19% and 30% below average, respectively). Differences in these energy, water, ecosystem relationships among difference distrurbance regimes indicate that the sensitivity of ecosystems to changes in climate is heavily dependent on

  17. Phase partitioning and volatility of secondary organic aerosol components formed from α-pinene ozonolysis and OH oxidation: the importance of accretion products and other low volatility compounds

    NASA Astrophysics Data System (ADS)

    Lopez-Hilfiker, F. D.; Mohr, C.; Ehn, M.; Rubach, F.; Kleist, E.; Wildt, J.; Mentel, Th. F.; Carrasquillo, A.; Daumit, K.; Hunter, J.; Kroll, J. H.; Worsnop, D.; Thornton, J. A.

    2015-02-01

    We measured a large suite of gas and particle phase multi-functional organic compounds with a Filter Inlet for Gases and AEROsols (FIGAERO) coupled to a high-resolution time-of-flight chemical ionization mass spectrometer (HR-ToF-CIMS) developed at the University of Washington. The instrument was deployed on environmental simulation chambers to study monoterpene oxidation as a secondary organic aerosol (SOA) source. We focus here on results from experiments utilizing an ionization method most selective towards acids (acetate negative ion proton transfer), but our conclusions are based on more general physical and chemical properties of the SOA. Hundreds of compounds were observed in both gas and particle phases, the latter being detected upon temperature programmed thermal desorption of collected particles. Particulate organic compounds detected by the FIGAERO HR-ToF-CIMS are highly correlated with, and explain at least 25-50% of, the organic aerosol mass measured by an Aerodyne Aerosol Mass Spectrometer (AMS). Reproducible multi-modal structures in the thermograms for individual compounds of a given elemental composition reveal a significant SOA mass contribution from large molecular weight organics and/or oligomers (i.e. multi-phase accretion reaction products). Approximately 50% of the HR-ToF-CIMS particle phase mass is associated with compounds having effective vapor pressures 4 or more orders of magnitude lower than commonly measured monoterpene oxidation products. The relative importance of these accretion-type and other extremely low volatility products appears to vary with photochemical conditions. We present a desorption temperature based framework for apportionment of thermogram signals into volatility bins. The volatility-based apportionment greatly improves agreement between measured and modeled gas-particle partitioning for select major and minor components of the SOA, consistent with thermal decomposition during desorption causing the conversion of

  18. Phase partitioning and volatility of secondary organic aerosol components formed from α-pinene ozonolysis and OH oxidation: the importance of accretion products and other low volatility compounds

    NASA Astrophysics Data System (ADS)

    Lopez-Hilfiker, F. D.; Mohr, C.; Ehn, M.; Rubach, F.; Kleist, E.; Wildt, J.; Mentel, Th. F.; Carrasquillo, A. J.; Daumit, K. E.; Hunter, J. F.; Kroll, J. H.; Worsnop, D. R.; Thornton, J. A.

    2015-07-01

    We measured a large suite of gas- and particle-phase multi-functional organic compounds with a Filter Inlet for Gases and AEROsols (FIGAERO) coupled to a high-resolution time-of-flight chemical ionization mass spectrometer (HR-ToF-CIMS) developed at the University of Washington. The instrument was deployed on environmental simulation chambers to study monoterpene oxidation as a secondary organic aerosol (SOA) source. We focus here on results from experiments utilizing an ionization method most selective towards acids (acetate negative ion proton transfer), but our conclusions are based on more general physical and chemical properties of the SOA. Hundreds of compounds were observed in both gas and particle phases, the latter being detected by temperature-programmed thermal desorption of collected particles. Particulate organic compounds detected by the FIGAERO-HR-ToF-CIMS are highly correlated with, and explain at least 25-50 % of, the organic aerosol mass measured by an Aerodyne aerosol mass spectrometer (AMS). Reproducible multi-modal structures in the thermograms for individual compounds of a given elemental composition reveal a significant SOA mass contribution from high molecular weight organics and/or oligomers (i.e., multi-phase accretion reaction products). Approximately 50 % of the HR-ToF-CIMS particle-phase mass is associated with compounds having effective vapor pressures 4 or more orders of magnitude lower than commonly measured monoterpene oxidation products. The relative importance of these accretion-type and other extremely low volatility products appears to vary with photochemical conditions. We present a desorption-temperature-based framework for apportionment of thermogram signals into volatility bins. The volatility-based apportionment greatly improves agreement between measured and modeled gas-particle partitioning for select major and minor components of the SOA, consistent with thermal decomposition during desorption causing the conversion of

  19. Phase partitioning and volatility of secondary organic aerosol components formed from α-pinene ozonolysis and OH oxidation: the importance of accretion products and other low volatility compounds

    DOE PAGESBeta

    Lopez-Hilfiker, F. D.; Mohr, C.; Ehn, M.; Rubach, F.; Kleist, E.; Wildt, J.; Mentel, Th. F.; Carrasquillo, A. J.; Daumit, K. E.; Hunter, J. F.; et al

    2015-07-16

    We measured a large suite of gas- and particle-phase multi-functional organic compounds with a Filter Inlet for Gases and AEROsols (FIGAERO) coupled to a high-resolution time-of-flight chemical ionization mass spectrometer (HR-ToF-CIMS) developed at the University of Washington. The instrument was deployed on environmental simulation chambers to study monoterpene oxidation as a secondary organic aerosol (SOA) source. We focus here on results from experiments utilizing an ionization method most selective towards acids (acetate negative ion proton transfer), but our conclusions are based on more general physical and chemical properties of the SOA. Hundreds of compounds were observed in both gas andmore » particle phases, the latter being detected by temperature-programmed thermal desorption of collected particles. Particulate organic compounds detected by the FIGAERO–HR-ToF-CIMS are highly correlated with, and explain at least 25–50 % of, the organic aerosol mass measured by an Aerodyne aerosol mass spectrometer (AMS). Reproducible multi-modal structures in the thermograms for individual compounds of a given elemental composition reveal a significant SOA mass contribution from high molecular weight organics and/or oligomers (i.e., multi-phase accretion reaction products). Approximately 50 % of the HR-ToF-CIMS particle-phase mass is associated with compounds having effective vapor pressures 4 or more orders of magnitude lower than commonly measured monoterpene oxidation products. The relative importance of these accretion-type and other extremely low volatility products appears to vary with photochemical conditions. We present a desorption-temperature-based framework for apportionment of thermogram signals into volatility bins. The volatility-based apportionment greatly improves agreement between measured and modeled gas-particle partitioning for select major and minor components of the SOA, consistent with thermal decomposition during desorption causing the

  20. Phase partitioning and volatility of secondary organic aerosol components formed from α-pinene ozonolysis and OH oxidation: the importance of accretion products and other low volatility compounds

    DOE PAGESBeta

    Lopez-Hilfiker, F. D.; Mohr, C.; Ehn, M.; Rubach, F.; Kleist, E.; Wildt, J.; Mentel, Th. F.; Carrasquillo, A.; Daumit, K.; Hunter, J.; et al

    2015-02-18

    We measured a large suite of gas and particle phase multi-functional organic compounds with a Filter Inlet for Gases and AEROsols (FIGAERO) coupled to a high-resolution time-of-flight chemical ionization mass spectrometer (HR-ToF-CIMS) developed at the University of Washington. The instrument was deployed on environmental simulation chambers to study monoterpene oxidation as a secondary organic aerosol (SOA) source. We focus here on results from experiments utilizing an ionization method most selective towards acids (acetate negative ion proton transfer), but our conclusions are based on more general physical and chemical properties of the SOA. Hundreds of compounds were observed in both gasmore » and particle phases, the latter being detected upon temperature programmed thermal desorption of collected particles. Particulate organic compounds detected by the FIGAERO HR-ToF-CIMS are highly correlated with, and explain at least 25–50% of, the organic aerosol mass measured by an Aerodyne Aerosol Mass Spectrometer (AMS). Reproducible multi-modal structures in the thermograms for individual compounds of a given elemental composition reveal a significant SOA mass contribution from large molecular weight organics and/or oligomers (i.e. multi-phase accretion reaction products). Approximately 50% of the HR-ToF-CIMS particle phase mass is associated with compounds having effective vapor pressures 4 or more orders of magnitude lower than commonly measured monoterpene oxidation products. The relative importance of these accretion-type and other extremely low volatility products appears to vary with photochemical conditions. We present a desorption temperature based framework for apportionment of thermogram signals into volatility bins. The volatility-based apportionment greatly improves agreement between measured and modeled gas–particle partitioning for select major and minor components of the SOA, consistent with thermal decomposition during desorption causing the

  1. A dynamic growth model for prediction of nutrient partitioning and manure production in growing-finishing pigs: Model development and evaluation.

    PubMed

    Strathe, A B; Danfær, A; Jørgensen, H; Kebreab, E

    2015-03-01

    Nutrient loading and air emissions from swine operations raise environmental concerns. The objective of the study was to describe and evaluate a mathematical model (Davis Swine Model) of nutrient partitioning and predict manure excretion and composition on a daily basis. State variables of the model were AA, fatty acids, and a central pool of metabolites that supplied substrate for lipid synthesis and oxidation. The model traced the fate of ingested nutrients and water through digestion and intermediary metabolism into body protein, fat, water, and ash, where body protein and fat represented the body constituent pools. It was assumed that fluxes of metabolites follow saturation kinetics, depending on metabolite concentrations. The main inputs to the model were diet nutrient composition, feed intake, water-to-feed ratio, and initial BW. First, the model was challenged with nutrient partitioning data and then with excretion data. The data had 48 different feeding regimes with contrasting energy and lysine intakes at 2 different stages of growth. The overall observed and predicted mean were 109 and 112 g/d for protein deposition and 132 and 136 g/d for lipid deposition respectively, suggesting minor mean bias. Root mean square prediction error (RMSPE) was used in evaluation of the model for its predictive power. The overall RMSPE was 2.2 and 4.1 g/d for protein and lipid deposition, respectively. The excretion database used for evaluation of the model was constructed from 150 digestibility trials using growing-finishing pig diets that had a wide range of nutrient chemical composition. Nutrient and water excretion were quantified using the principle of mass conservation. The average daily observed and predicted manure production was 3.79 and 3.99 kg/d, respectively, with a RMSPE of 0.49 kg/d. There was a good agreement between observed and predicted mean fecal N output (9.9 and 9.8 g/d, respectively). Similarly, the overall observed and predicted mean urine N output

  2. Biomimetic oxidative dimerization of anodically generated stilbene radical cations: effect of aromatic substitution on product distribution and reaction pathways.

    PubMed

    Hong, Fong-Jiao; Low, Yun-Yee; Chong, Kam-Weng; Thomas, Noel F; Kam, Toh-Seok

    2014-05-16

    A systematic study of the electrochemical oxidation of 1,2-diarylalkenes was carried out with the focus on detailed product studies and variation of product type as a function of aromatic substitution. A reinvestigation of the electrochemical oxidation of 4,4'-dimethoxystilbene under various conditions was first carried out, and all products formed were fully characterized and quantitated. This was followed by a systematic investigation of the effect of aromatic substitution on the nature and distribution of the products. The aromatic substituents were found to fall into three main categories, viz., substrates in which the nature and position of the aromatic substituents gave rise to essentially the same products as 4,4'-dimethoxystilbene, for example, tetraaryltetrahydrofurans, dehydrotetralins, and aldehydes (p-MeO or p-NMe2 on one ring and X on the other ring, where X = o-MeO or p-alkyl, or m- or p-EWG; e.g., 4-methoxy-4'-trifluoromethylstilbene); those that gave rise to a mixture of indanyl (or tetralinyl) acetamides and dehydrotetralins (or pallidols) (both or one ring substituted by alkyl groups, e.g., 4,4'-dimethylstilbene); and those where strategic placement of donor groups, such as OMe and OH, led to the formation of ampelopsin F and pallidol-type carbon skeletons (e.g., 4,3',4'-trimethoxystilbene). Reaction pathways to rationalize the formation of the different products are presented. PMID:24754525

  3. Quantum Dilogarithms and Partition q-Series

    NASA Astrophysics Data System (ADS)

    Kato, Akishi; Terashima, Yuji

    2015-08-01

    In our previous work (Kato and Terashima, Commun Math Phys. arXiv:1403.6569, 2014), we introduced the partition q-series for mutation loop γ—a loop in exchange quiver. In this paper, we show that for a certain class of mutation sequences, called reddening sequences, the graded version of partition q-series essentially coincides with the ordered product of quantum dilogarithm associated with each mutation; the partition q-series provides a state-sum description of combinatorial Donaldson-Thomas invariants introduced by Keller.

  4. Continuous partition lattice

    PubMed Central

    Björner, Anders

    1987-01-01

    A continuous analogue to the partition lattices is presented. This is the metric completion of the direct limit of a system of embeddings of the finite partition lattices. The construction is analogous to von Neumann's construction of a continuous geometry over a field F from the finite-dimensional projective geometries over F. PMID:16593874

  5. Cross sections for the production of energetic cations by electron impact on N2 and CO2

    NASA Technical Reports Server (NTRS)

    Iga, I.; Srivastava, S. K.; Rao, M. V. V. S.; Katayama, D. H.

    1995-01-01

    Dissociative ionization cross sections for the production of singly charged energetic ions by electron impact on N2 and CO2 have been measured. The ions were divided into two groups: one with energies less than 1 eV and the other with energies greater than 1 eV. The ions detected were N+ from N2 and C+, O+, and CO+ from CO2. The electron impact energy range, and cross section data on ions is given.

  6. Partitioning ecosystems for sustainability.

    PubMed

    Murray, Martyn G

    2016-03-01

    Decline in the abundance of renewable natural resources (RNRs) coupled with increasing demands of an expanding human population will greatly intensify competition for Earth's natural resources during this century, yet curiously, analytical approaches to the management of productive ecosystems (ecological theory of wildlife harvesting, tragedy of the commons, green economics, and bioeconomics) give only peripheral attention to the driving influence of competition on resource exploitation. Here, I apply resource competition theory (RCT) to the exploitation of RNRs and derive four general policies in support of their sustainable and equitable use: (1) regulate resource extraction technology to avoid damage to the resource base; (2) increase efficiency of resource use and reduce waste at every step in the resource supply chain and distribution network; (3) partition ecosystems with the harvesting niche as the basic organizing principle for sustainable management of natural resources by multiple users; and (4) increase negative feedback between consumer and resource to bring about long-term sustainable use. A simple policy framework demonstrates how RCT integrates with other elements of sustainability science to better manage productive ecosystems. Several problem areas of RNR management are discussed in the light of RCT, including tragedy of the commons, overharvesting, resource collapse, bycatch, single species quotas, and simplification of ecosystems. PMID:27209800

  7. Use of Cation Exchange Resins for Production of U{sub 3}O{sub 8} Suitable for the Al-U{sub 3}O{sub 8} Powder Metallurgy Process

    SciTech Connect

    Mosley, W.C.

    2001-09-17

    This report describes the production of U{sub 3}O{sub 8} powders from three types of cation exchange resins: Dowex 50W, a strong acid, sulfonate resin; AG MP-50, a macroporous form of sulfonate resin; and Bio-Rex 70, a weak acid, carboxylic resin.

  8. An MCM modeling study of nitryl chloride (ClNO2) impacts on oxidation, ozone production and nitrogen oxide partitioning in polluted continental outflow

    NASA Astrophysics Data System (ADS)

    Riedel, T. P.; Wolfe, G. M.; Danas, K. T.; Gilman, J. B.; Kuster, W. C.; Bon, D. M.; Vlasenko, A.; Li, S.-M.; Williams, E. J.; Lerner, B. M.; Veres, P. R.; Roberts, J. M.; Holloway, J. S.; Lefer, B.; Brown, S. S.; Thornton, J. A.

    2013-11-01

    Nitryl chloride (ClNO2) is produced at night by reactions of dinitrogen pentoxide (N2O5) on chloride containing surfaces. ClNO2 is photolyzed during the morning hours after sunrise to liberate highly reactive chlorine atoms (Cl·). This chemistry takes place primarily in polluted environments where the concentrations of N2O5 precursors (nitrogen oxide radicals and ozone) are high, though it likely occurs in remote regions at lower intensities. Recent field measurements have illustrated the potential importance of ClNO2 as a daytime Cl· source and a nighttime NOx reservoir. However, the fate of the Cl· and the overall impact of ClNO2 on regional photochemistry remain unclear. To this end, we have incorporated ClNO2 production, photolysis, and subsequent Cl· reactions into an existing Master Chemical Mechanism (MCM version 3.2) box model framework using observational constraints from the CalNex 2010 field study. Cl· reactions with a set of alkenes and alcohols, and the simplified multiphase chemistry of N2O5, ClNO2, HOCl, ClONO2, and Cl2, none of which are currently part of the MCM, have been added to the mechanism. The presence of ClNO2 produces significant changes to oxidants, ozone, and nitrogen oxide partitioning, relative to model runs excluding ClNO2 formation. From a nighttime maximum of 1.5 ppbv ClNO2, the daytime maximum Cl· concentration reaches 1 × 105 atoms cm-3 at 7 a.m., reacting mostly with a large suite of volatile organic compounds (VOC) to produce 2.2 times more organic peroxy radicals in the morning than in the absence of ClNO2. In the presence of several ppbv of nitrogen oxide radicals (NOx = NO + NO2), these perturbations lead to similar enhancements in hydrogen oxide radicals (HOx = OH + HO2). Neglecting contributions from HONO, the total integrated daytime radical source is 17% larger when including ClNO2, which leads to a similar enhancement in integrated ozone production of 15%. Detectable levels (tens of pptv) of chlorine containing

  9. An MCM modeling study of nitryl chloride (ClNO2) impacts on oxidation, ozone production and nitrogen oxide partitioning in polluted continental outflow

    NASA Astrophysics Data System (ADS)

    Riedel, T. P.; Wolfe, G. M.; Danas, K. T.; Gilman, J. B.; Kuster, W. C.; Bon, D. M.; Vlasenko, A.; Li, S.-M.; Williams, E. J.; Lerner, B. M.; Veres, P. R.; Roberts, J. M.; Holloway, J. S.; Lefer, B.; Brown, S. S.; Thornton, J. A.

    2014-04-01

    Nitryl chloride (ClNO2) is produced at night by reactions of dinitrogen pentoxide (N2O5) on chloride containing surfaces. ClNO2 is photolyzed during the morning hours after sunrise to liberate highly reactive chlorine atoms (Cl·). This chemistry takes place primarily in polluted environments where the concentrations of N2O5 precursors (nitrogen oxide radicals and ozone) are high, though it likely occurs in remote regions at lower intensities. Recent field measurements have illustrated the potential importance of ClNO2 as a daytime Cl· source and a nighttime NOx reservoir. However, the fate of the Cl· and the overall impact of ClNO2 on regional photochemistry remain poorly constrained by measurements and models. To this end, we have incorporated ClNO2 production, photolysis, and subsequent Cl· reactions into an existing master chemical mechanism (MCM version 3.2) box model framework using observational constraints from the CalNex 2010 field study. Cl· reactions with a set of alkenes and alcohols, and the simplified multiphase chemistry of N2O5, ClNO2, HOCl, ClONO2, and Cl2, none of which are currently part of the MCM, have been added to the mechanism. The presence of ClNO2 produces significant changes to oxidants, ozone, and nitrogen oxide partitioning, relative to model runs excluding ClNO2 formation. From a nighttime maximum of 1.5 ppbv ClNO2, the daytime maximum Cl· concentration reaches 1 × 105 atoms cm-3 at 07:00 model time, reacting mostly with a large suite of volatile organic compounds (VOC) to produce 2.2 times more organic peroxy radicals in the morning than in the absence of ClNO2. In the presence of several ppbv of nitrogen oxide radicals (NOx = NO + NO2), these perturbations lead to similar enhancements in hydrogen oxide radicals (HOx = OH + HO2). Neglecting contributions from HONO, the total integrated daytime radical source is 17% larger when including ClNO2, which leads to a similar enhancement in integrated ozone production of 15%. Detectable

  10. Production, characterization, and flocculation mechanism of cation independent, pH tolerant, and thermally stable bioflocculant from Enterobacter sp. ETH-2.

    PubMed

    Tang, Wei; Song, Liyan; Li, Dou; Qiao, Jing; Zhao, Tiantao; Zhao, Heping

    2014-01-01

    Synthetic high polymer flocculants, frequently utilized for flocculating efficiency and low cost, recently have been discovered as producing increased risk to human health and the environment. Development of a more efficient and environmentally sound alternative flocculant agent is investigated in this paper. Bioflocculants are produced by microorganisms and may exhibit a high rate of flocculation activity. The bioflocculant ETH-2, with high flocculating activity (2849 mg Kaolin particle/mg ETH-2), produced by strain Enterobacter sp. isolated from activated sludge, was systematically investigated with regard to its production, characterization, and flocculation mechanism. Analyses of microscopic observation, zeta potential and ETH-2 structure demonstrates the bridging mechanism, as opposed to charge neutralization, was responsible for flocculation of the ETH-2. ETH-2 retains high molecular weight (603 to 1820 kDa) and multi-functional groups (hydroxyl, amide and carboxyl) that contributed to flocculation. Polysaccharides mainly composed of mannose, glucose, and galactose, with a molar ratio of 1:2.9:9.8 were identified as the active constituents in bioflocculant. The structure of the long backbone with active sites of polysaccharides was determined as a primary basis for the high flocculation activity. Bioflocculant ETH-2 is cation independent, pH tolerant, and thermally stable, suggesting a potential fit for industrial application. PMID:25485629

  11. Fuzzy Partition Models for Fitting a Set of Partitions.

    ERIC Educational Resources Information Center

    Gordon, A. D.; Vichi, M.

    2001-01-01

    Describes methods for fitting a fuzzy consensus partition to a set of partitions of the same set of objects. Describes and illustrates three models defining median partitions and compares these methods to an alternative approach to obtaining a consensus fuzzy partition. Discusses interesting differences in the results. (SLD)

  12. Partitioning and parallel radiosity

    NASA Astrophysics Data System (ADS)

    Merzouk, S.; Winkler, C.; Paul, J. C.

    1996-03-01

    This paper proposes a theoretical framework, based on domain subdivision for parallel radiosity. Moreover, three various implementation approaches, taking advantage of partitioning algorithms and global shared memory architecture, are presented.

  13. ABSORPTION METHOD FOR SEPARATING METAL CATIONS

    DOEpatents

    Tompkins, E.R.; Parker, G.W.

    1959-03-10

    An improved method is presented for the chromatographic separation of fission products wherein a substantial reduction in liquid volume is obtained. The process consists in contacting a solution containing fission products with a body of ion-exchange adsorbent to effect adsorption of fission product cations. The loaded exchange resin is then contacted with a small volume of a carboxylic acid eluant, thereby recovering the fission products. The fission product carrying eluate is acidified without increasing its volume to the volume of the original solution, and the acidified eluate is then used as a feed solution for a smaller body of ion-exchange resin effecting readsorption of the fission product cations.

  14. The cubyl cation rearrangements.

    PubMed

    Jalife, Said; Mondal, Sukanta; Cabellos, Jose Luis; Martinez-Guajardo, Gerardo; Fernandez-Herrera, Maria A; Merino, Gabriel

    2016-02-25

    Born-Oppenheimer molecular dynamics simulations and high-level ab initio computations predict that the cage-opening rearrangement of the cubyl cation to the 7H(+)-pentalenyl cation is feasible in the gas phase. The rate-determining step is the formation of the cuneyl cation with an activation barrier of 25.3 kcal mol(-1) at the CCSD(T)/def2-TZVP//MP2/def2-TZVP level. Thus, the cubyl cation is kinetically stable enough to be formed and trapped at moderate temperatures, but it may be rearranged at higher temperatures. PMID:26880646

  15. Hydrogen production by steam reforming of liquefied natural gas (LNG) over nickel catalysts supported on cationic surfactant-templated mesoporous aluminas

    NASA Astrophysics Data System (ADS)

    Seo, Jeong Gil; Youn, Min Hye; Park, Sunyoung; Jung, Ji Chul; Kim, Pil; Chung, Jin Suk; Song, In Kyu

    Two types of mesoporous γ-aluminas (denoted as A-A and A-S) are prepared by a hydrothermal method under different basic conditions using cationic surfactant (cetyltrimethylammonium bromide, CTAB) as a templating agent. A-A and A-S are synthesized in a medium of ammonia solution and sodium hydroxide solution, respectively. Ni/γ-Al 2O 3 catalysts (Ni/A-A and Ni/A-S) are then prepared by an impregnation method, and are applied to hydrogen production by steam reforming of liquefied natural gas (LNG). The effect of a mesoporous γ-Al 2O 3 support on the catalytic performance of Ni/γ-Al 2O 3 is investigated. The identity of basic solution strongly affects the physical properties of the A-A and A-S supports. The high surface-area of the mesoporous γ-aluminas and the strong metal-support interaction of supported catalysts greatly enhance the dispersion of nickel species on the catalyst surface. The well-developed mesopores of the Ni/A-A and Ni/A-S catalysts prohibit the polymerization of carbon species on the catalyst surface during the reaction. In the steam reforming of LNG, both Ni/A-A and Ni/A-S catalysts give better catalytic performance than the nickel catalyst supported on commercial γ-Al 2O 3 (Ni/A-C). In addition, the Ni/A-A catalyst is superior to the Ni/A-S catalyst. The relatively strong metal-support interaction of Ni/A-A catalyst effectively suppresses the sintering of metallic nickel and the carbon deposition in the steam reforming of LNG. The large pores of the Ni/A-A catalyst also play an important role in enhancing internal mass transfer during the reaction.

  16. Partitioning Breaks Communities

    NASA Astrophysics Data System (ADS)

    Reid, Fergal; McDaid, Aaron; Hurley, Neil

    Considering a clique as a conservative definition of community structure, we examine how graph partitioning algorithms interact with cliques. Many popular community-finding algorithms partition the entire graph into non-overlapping communities. We show that on a wide range of empirical networks, from different domains, significant numbers of cliques are split across the separate partitions produced by these algorithms. We then examine the largest connected component of the subgraph formed by retaining only edges in cliques, and apply partitioning strategies that explicitly minimise the number of cliques split. We further examine several modern overlapping community finding algorithms, in terms of the interaction between cliques and the communities they find, and in terms of the global overlap of the sets of communities they find. We conclude that, due to the connectedness of many networks, any community finding algorithm that produces partitions must fail to find at least some significant structures. Moreover, contrary to traditional intuition, in some empirical networks, strong ties and cliques frequently do cross community boundaries; much community structure is fundamentally overlapping and unpartitionable in nature.

  17. Advancements in Anion Exchange Membrane Cations

    SciTech Connect

    Sturgeon, Matthew R.; Long, Hai; Park, Andrew M.; Pivovar, Bryan S.

    2015-10-15

    Anion-exchange membrane fuel cells (AME-FCs) are of increasingly popular interest as they enable the use of non-Pt fuel cell catalysts, the primary cost limitation of proton exchange membrane fuel cells. Benzyltrimethyl ammonium (BTMA) is the standard cation that has historically been utilized as the hydroxide conductor in AEMs. Herein we approach AEMs from two directions. First and foremost we study the stability of several different cations in a hydroxide solution at elevated temperatures. We specifically targeted BTMA and methoxy and nitro substituted BTMA. We've also studied the effects of adding an akyl spacer units between the ammonium cation and the phenyl group. In the second approach we use computational studies to predict stable ammonium cations, which are then synthesized and tested for stability. Our unique method to study cation stability in caustic conditions at elevated temperatures utilizes Teflon Parr reactors suitable for use under various temperatures and cation concentrations. NMR analysis was used to determine remaining cation concentrations at specific time points with GCMS analysis verifying product distribution. We then compare the experimental results with calculated modeling stabilities. Our studies show that the electron donating methoxy groups slightly increase stability (compared to that of BTMA), while the electron withdrawing nitro groups greatly decrease stability in base. These results give insight into possible linking strategies to be employed when tethering a BTMA like ammonium cation to a polymeric backbone; thus synthesizing an anion exchange membrane.

  18. Partition density functional theory

    NASA Astrophysics Data System (ADS)

    Nafziger, Jonathan

    Partition density functional theory (PDFT) is a method for dividing a molecular electronic structure calculation into fragment calculations. The molecular density and energy corresponding to Kohn Sham density-functional theory (KS-DFT) may be exactly recovered from these fragments. Each fragment acts as an isolated system except for the influence of a global one-body 'partition' potential which deforms the fragment densities. In this work, the developments of PDFT are put into the context of other fragment-based density functional methods. We developed three numerical implementations of PDFT: One within the NWChem computational chemistry package using basis sets, and the other two developed from scratch using real-space grids. It is shown that all three of these programs can exactly reproduce a KS-DFT calculation via fragment calculations. The first of our in-house codes handles non-interacting electrons in arbitrary one-dimensional potentials with any number of fragments. This code is used to explore how the exact partition potential changes for different partitionings of the same system and also to study features which determine which systems yield non-integer PDFT occupations and which systems are locked into integer PDFT occupations. The second in-house code, CADMium, performs real-space calculations of diatomic molecules. Features of the exact partition potential are studied for a variety of cases and an analytical formula determining singularities in the partition potential is derived. We introduce an approximation for the non-additive kinetic energy and show how this quantity can be computed exactly. Finally a PDFT functional is developed to address the issues of static correlation and delocalization errors in approximations within DFT. The functional is applied to the dissociation of H2 + and H2.

  19. Cumulants of partitions

    NASA Astrophysics Data System (ADS)

    Weiss, Christoph; Block, Martin; Holthaus, Martin; Schmieder, Gerald

    2003-02-01

    We utilize the formal equivalence between the number-partitioning problem and a harmonically trapped ideal Bose gas within the microcanonical ensemble for characterizing the probability distribution which governs the number of addends occurring in an unrestricted partition of a natural number n. By deriving accurate asymptotic formulae for its coefficients of skewness and excess, it is shown that this distribution remains non-Gaussian even when n is made arbitrarily large. Both skewness and excess vary substantially before settling to their constant-limiting values for n > 1010.

  20. FNAS phase partitions

    NASA Technical Reports Server (NTRS)

    Vanalstine, James M.

    1993-01-01

    Project NAS8-36955 D.O. #100 initially involved the following tasks: (1) evaluation of various coatings' ability to control wall wetting and surface zeta potential expression; (2) testing various methods to mix and control the demixing of phase systems; and (3) videomicroscopic investigation of cell partition. Three complementary areas were identified for modification and extension of the original contract. They were: (1) identification of new supports for column cell partition; (2) electrokinetic detection of protein adsorption; and (3) emulsion studies related to bioseparations.

  1. Tandem anion and cation exchange solid phase extraction for the enrichment of micropollutants and their transformation products from ozonation in a wastewater treatment plant.

    PubMed

    Deeb, Ahmad A; Schmidt, Torsten C

    2016-06-01

    The presence of organic micropollutants and their transformation products (TPs) from biotic and abiotic processes in aquatic environments is receiving intense public and scientific attention. Yet a suitable sample preparation method that would enable extraction and enrichment of a wide range of such compounds from water is missing. The focus of this paper was to develop an enhanced solid phase extraction (SPE) protocol which enabled isolation of parent compounds and low molecular weight transformation products (that are produced after treatment of water with ozone) from different water matrices. Ten SPE sorbents were evaluated with regard to their ability to extract acidic, neutral, and basic compounds from water at several pH values. Highest recoveries (91-99 %) for all analytes in pure water were obtained by combining strong anion and cation exchangers of two manufacturers in a tandem mode without pH adjustment. Tandem Oasis (MAX+MCX) was finally applied to extract the spiked analytes from tap water, surface water, and several wastewater samples. The efficiency of the used SPE procedure was examined using an optimized liquid chromatography-electrospray ionization-tandem mass spectrometry (LC-ESI-MS/MS) method using multiple reaction monitoring (MRM) mode. The occurrence of some of the investigated TPs in environmental water matrices was proven for the first time in this study. Method quantification limits (MQLs) for all compounds ranged from 3.7 to 15.3 ng/L in all matrices. Recoveries (%RE) were between 90 and 110 %. Intraday and interday precision, expressed as relative standard deviation, varied from 0.7 to 5.9 % and 1.8 to 10.3 %, respectively. Matrix effect (%ME) evaluation demonstrated that even complex sample matrices did not show significant ion suppression or enhancement. The applicability of the method was shown during two sampling campaigns at Ruhr river and a wastewater treatment plant (WWTP) equipped with an ozonation step after regular

  2. Actinide partitioning processes for fuel reprocessing and refabrication plant wastes

    SciTech Connect

    Finney, B.C.; Tedder, D.W.

    1980-01-01

    Chemical processing methods have been developed on a laboratory scale to partition the actinides from the liquid and solid fuel reprocessing plant (FRP) and refabrication plant (FFP) wastes. It was envisioned that these processes would be incorporated into separate waste treatment facilities (WTFs) that are adjacent to, but not integrated with, the fuel reprocessing and refabrication plants. Engineering equipment and material balance flowsheets have been developed for WTFs in support of a 2000-MTHM/year FRP and a 660-MTHM/year MOX-FFP. The processing subsystems incorporated in the FRP-WTF are: High-Level Solid Waste Treatment, High-Level Liquid Waste Treatment, Solid Alpha Waste Treatment, Cation Exchange Chromatography, Salt Waste Treatment, Actinide Recovery, Solvent Cleanup and recycle, Off-Gas Treatment, Actinide Product Concentration, and Acid and Water Recycle. The WTF supporting a fuel refabrication facility, although similar, does not contain subsystems (1) and (2). Based on the results of the laboratory and hot-cell experimental work, we believe that the processes and flowsheets offer the potential to reduce the total unrecovered actinides in FRP and FFP wastes to less than or equal to 0.25%. The actinide partitioning processes and the WTF concept represent advanced technology that would require substantial work before commercialization. It is estimated that an orderly development program would require 15 to 20 years to complete and would cost about 700 million 1979 dollars. It is estimated that the capital cost and annual operating cost, in mid-1979 dollars, for the FRP-WTF are $1035 million and $71.5 million/year, and for the FFP-WTF are $436 million and $25.6 million/year, respectively.

  3. New Aperture Partitioning Element

    NASA Astrophysics Data System (ADS)

    Griffin, S.; Calef, B.; Williams, S.

    Postprocessing in an optical system can be aided by adding an optical element to partition the pupil into a number of segments. When imaging through the atmosphere, the recorded data are blurred by temperature-induced variations in the index of refraction along the line of sight. Using speckle imaging techniques developed in the astronomy community, this blurring can be corrected to some degree. The effectiveness of these techniques is diminished by redundant baselines in the pupil. Partitioning the pupil reduces the degree of baseline redundancy, and therefore improves the quality of images that can be obtained from the system. It is possible to implement the described approach on an optical system with a segmented primary mirror, but not very practical. This is because most optical systems do not have segmented primary mirrors, and those that do have relatively low bandwidth positioning of segments due to their large mass and inertia. It is much more practical to position an active aperture partitioning element at an aft optics pupil of the optical system. This paper describes the design, implementation and testing of a new aperture partitioning element that is completely reflective and reconfigurable. The device uses four independent, annular segments that can be positioned with a high degree of accuracy without impacting optical wavefront of each segment. This mirror has been produced and is currently deployed and working on the 3.6 m telescope.

  4. C{sub 8}H{sub 8} radical cations of cyclooctatetraene, semibullvalene, and their common bisallylic rearrangement product. Electronic structure and potential energy surfaces

    SciTech Connect

    Bally, T.; Truttmann, L.; Dai, S.; Williams, F.

    1995-08-02

    The recently discovered access paths to the radical cation of bicyclo[3,3,0]octa-2,6-diene-4,8-diyl (BOD{sup +}) are explored by electronic absorption (EA) spectroscopy whereby previous ESR results are confirmed. The electronic and molecular structure of BOD{sup +} and of its photoprecursor, the radical cation of cyclooctatetraene (COT{sup +}), are discussed on the basis of their EA spectra and ab initio calculations. The ground and excited state potential surfaces common to the title cations are explored, and it is shown that the COT{sup +} {yields} BOD{sup +} photorearrangement proceeds mainly by virtue of a pronounced Jahn-Teller distortion of the second excited state of COT{sup +} ({sup 2}E). This distortion competes effectively with internal conversion to the first excited state, leads to an inversion of the ground state symmetry, and covers a substantial part of the reaction path leading to the bisallylic cation. 37 refs., 8 figs., 4 tabs.

  5. Set Partitions and the Multiplication Principle

    ERIC Educational Resources Information Center

    Lockwood, Elise; Caughman, John S., IV

    2016-01-01

    To further understand student thinking in the context of combinatorial enumeration, we examine student work on a problem involving set partitions. In this context, we note some key features of the multiplication principle that were often not attended to by students. We also share a productive way of thinking that emerged for several students who…

  6. A review of approaches for evapotranspiration partitioning

    Technology Transfer Automated Retrieval System (TEKTRAN)

    Partitioning of evapotranspiration (ET) into evaporation from the soil surface (E) and transpiration (T) is challenging but important in order to assess biomass production and the allocation of increasingly scarce water resources. Generally T is the desired component with the water being used to enh...

  7. Equilibration timescale of atmospheric secondary organic aerosol partitioning

    NASA Astrophysics Data System (ADS)

    Shiraiwa, Manabu; Seinfeld, John H.

    2012-12-01

    Secondary organic aerosol (SOA) formed from partitioning of oxidation products of anthropogenic and biogenic volatile organic compounds (VOCs) accounts for a substantial portion of atmospheric particulate matter. In describing SOA formation, it is generally assumed that VOC oxidation products rapidly adopt gas-aerosol equilibrium. Here we estimate the equilibration timescale, τeq, of SOA gas-particle partitioning using a state-of-the-art kinetic flux model. τeq is found to be of order seconds to minutes for partitioning of relatively high volatility organic compounds into liquid particles, thereby adhering to equilibrium gas-particle partitioning. However, τeq increases to hours or days for organic aerosol associated with semi-solid particles, low volatility, large particle size, and low mass loadings. Instantaneous equilibrium partitioning may lead to substantial overestimation of particle mass concentration and underestimation of gas-phase concentration.

  8. Selective Production of Electrostatically-Bound Adducts of Alkyl Cations/Polyoxoanions by the Collision-Induced Fragmentations of Their Quaternary Ammonium Counterparts

    NASA Astrophysics Data System (ADS)

    Cao, Jie; Xu, Chong; Fan, YanXuan; Fan, LinYuan; Zhang, XiuHui; Hu, ChangWen

    2013-06-01

    Solutions of the quaternary ammonium salts of a set of classic polyoxometalates (POMs) (Keggin [XM12O40]n-, Dawson [P2W18O62]6-, and Lindqvist [M6O19]2- (X = P, Si; M = W, Mo) were characterized by electrospray mass spectrometry. The gas-phase fragmentations of a series of quaternary ammonium-associated clusters were investigated by their collision-induced dissociations to elucidate their fragmentation mechanisms. It was found that the quaternary ammonium-associated clusters had distinctive dissociation characteristics. Moreover, the mono-quaternary ammonium-associated clusters, {NR4[POMs]}(n-1)-, shared a common fragmentation feature, that is, they decomposed exclusively into their respective alkyl cation-bound clusters irrespective of the different cation sizes and the different natures of the polyoxoanions. The optimized geometries and the binding energies of the mono cation-bound Lindqvist POM-based clusters were obtained by calculations. To the best of our knowledge, this is the first investigation of the gas-phase fragmentations of these noncovalent complexes between organic amines and inorganic POM anions by a combination of theory and mass spectrometry.

  9. Collision cross-sections of [C,H,O] cations and radical cations from aliphatic [C,H,O] compounds

    NASA Astrophysics Data System (ADS)

    van Houte, J. J.; van Thuijl, J.

    1994-05-01

    Over 260 collision cross-section [sigma]ot, expressed in »ngströms squared, have been determined for the studied ions at 20 and 70 eV by extrapolation of [sigma]t to zero target gas pressure, and these yield two types of structural information. The first type concerns occurrence and detection of cyclic ions, the second isomerization of parent molecular ions and different product ion distributions at 20 and 70 eV. In addition, examples of two distinct fragmentation mechanisms operative in the formation of identical daughter ions from a given precursor could be traced. Formation of cyclic daughter ions is, for instance, observed for C2H3O+ from oxirane, C3H5O+ from oxetane, C4H7O+2 from 4-methyl-1,3-dioxolane. Cyclic molecular ions are formed in varying proportions from oxirane, tetrahydrofuran, 2- and 4-methyl-1,3-dioxolane but not from porpylene oxide, oxetane and 1,3-dioxolane. Isomerization of the parent molecular ion is proposed for the following fragmentations: CH2 from allyl alcohol, CHO2+ from formic acid, C2H2O·+ from oxirane, and C3H6O·+ from 3-methyl butanal and 2-methyl pentanal. Different product ion distributions at 20 and 70 eV were found for C3H5O+ from ethyl propionate and 2-pentanone, C2H4O·+ and C4H8O·+ from butane-1,3-diol, and C3H6O·+ from 2- and 4-methyl-1,3-dioxolane. Two distinct fragmentation mechanisms were traced for the following processes: CH2OH, C2H2O·+ and C2H3O+ from methyl vinyl ether, CH2 and C2H5O+ from butane-1,3-diol and C2H2O·+ from butanone. Self protonation of acetaldehyde also appears to take place by two mechanisms. Energy partitioning is evident in the formation of formyl cations HCO+ but wears off for processes in which larger daughter ions are formed. For formyl cations from straight chain aldehydes, the 70 eV collision cross-section is linearly related to the logarithm of the reciprocal of the number of degrees of freedom in the parent molcule, log (1/DFp). One example of a proton-bound dimer is given, that of

  10. Sorption of phenol, p-nitrophenol, and aniline to dual-cation organobentonites from water

    SciTech Connect

    Zhu, L.; Chen, B.; Shen, X.

    2000-02-01

    A series of dual-cation organobentonites are synthesized by replacing the metal ions in bentonite with both long-chain alkyl quaternary ammonium cations, such as dodecyltrimethylammonium (DTMA), benzyldimethyltetradecylammonium (BDTDA), cetyltrimethylammonium (CTMA), octodecyltrimethylammonium (OTMA), and short-chain alkyl quaternary ammonium cations, such as tetramethylammonium (TMA). The influential factors, mechanisms and characteristics of polar and ionizable organic contaminants, such as p-nitrophenol, phenol, and aniline, and sorption to dual-cation organobentonites from water are investigated systematically and described quantitatively. The sorption properties are affected by treatment conditions, such as pH, amount of organobentonite, and shaking time; structure of organobentonites, such as interlayer spacings and organic carbon contents; and the properties of organic compounds, such as solubility and octanol-water coefficient partition. Sorption isotherms of p-nitrophenol, phenol, and aniline are typically nonlinear. Both adsorption and partition contribute to the sorption of organic compounds to dual-cation organobentonites. The separate contributions of adsorption and partition to the total sorption of organic compounds to dual-cation organobentonites are analyzed mathematically, e.g., Q{sub A} = a in C{sub e} + b {minus} K{sub oc}{center_dot}f{sub oc}{center_dot}C{sub e}, O{sub p} = K{sub oc}{center_dot}f{sub oc}{center_dot}C{sub e}. Results indicate that the partition effect is weak and linear to contaminant concentration, whereas adsorption effect is more powerful and nonlinear to contaminant concentration. The sorption of organic compounds to dual-cation organobentonite is dominated by adsorption at low concentrations and by partition at high concentrations, making the organobentonites powerful sorbents for organic contaminants over a wide range of concentrations.

  11. A search for blues brothers: X-ray crystallographic/spectroscopic characterization of the tetraarylbenzidine cation radical as a product of aging of solid magic blue.

    PubMed

    Talipov, Marat R; Hossain, Mohammad M; Boddeda, Anitha; Thakur, Khushabu; Rathore, Rajendra

    2016-03-14

    Magic blue (MB+˙ SbCl6− salt), i.e. tris-4-bromophenylamminium cation radical, is a routinely employed one-electron oxidant that slowly decomposes in the solid state upon storage to form so called ‘blues brothers’, which often complicate the quantitative analyses of the oxidation processes. Herein, we disclose the identity of the main ‘blues brother’ as the cation radical and dication of tetrakis-(4-bromophenyl)benzidine (TAB) by a combined DFT and experimental approach, including isolation of TAB+˙ SbCl6− and its X-ray crystallography characterization. The formation of TAB in aged magic blue samples occurs by a Scholl-type coupling of a pair of MB followed by a loss of molecular bromine. The recognition of this fact led us to the rational design and synthesis of tris(2-bromo-4-tert-butylphenyl)amine, referred to as ‘blues cousin’ (BC: Eox1 = 0.78 V vs. Fc/Fc+, λmax(BC+˙) = 805 nm, εmax = 9930 cm−1 M−1), whose oxidative dimerization is significantly hampered by positioning the sterically demanding tert-butyl groups at the para-positions of the aryl rings. A ready two-step synthesis of BC from triphenylamine and the high stability of its cation radical (BC+˙) promise that BC will serve as a ready replacement for MB and an oxidant of choice for mechanistic investigations of one-electron transfer processes in organic, inorganic, and organometallic transformations. PMID:26878458

  12. Partitioning in Avionics Architectures: Requirements, Mechanisms, and Assurance

    NASA Technical Reports Server (NTRS)

    Rushby, John

    1999-01-01

    Automated aircraft control has traditionally been divided into distinct "functions" that are implemented separately (e.g., autopilot, autothrottle, flight management); each function has its own fault-tolerant computer system, and dependencies among different functions are generally limited to the exchange of sensor and control data. A by-product of this "federated" architecture is that faults are strongly contained within the computer system of the function where they occur and cannot readily propagate to affect the operation of other functions. More modern avionics architectures contemplate supporting multiple functions on a single, shared, fault-tolerant computer system where natural fault containment boundaries are less sharply defined. Partitioning uses appropriate hardware and software mechanisms to restore strong fault containment to such integrated architectures. This report examines the requirements for partitioning, mechanisms for their realization, and issues in providing assurance for partitioning. Because partitioning shares some concerns with computer security, security models are reviewed and compared with the concerns of partitioning.

  13. Trace element partitioning between clinopyroxene and trachy-phonolitic melts: A case study from the Campanian Ignimbrite (Campi Flegrei, Italy)

    NASA Astrophysics Data System (ADS)

    Mollo, S.; Forni, F.; Bachmann, O.; Blundy, J. D.; De Astis, G.; Scarlato, P.

    2016-05-01

    The partitioning of trace elements between crystals and melts provides an important petrogenetic tool for understanding magmatic processes. We present trace element partition coefficients measured between clinopyroxene phenocrysts and trachy-phonolitic magmas at the Campi Flegrei (Italy), whose late Quaternary volcanism has been characterized by two major caldera-forming events (Campanian Ignimbrite at ~ 39 ka, and Neapolitan Yellow Tuff at ~ 15 ka). Our data indicate that the increase of trivalent rare earth elements and yttrium into the crystal lattice M2 site is facilitated by the charge-balancing substitution of Si4 + with Al3 + on the tetrahedral site. Higher concentrations of tetravalent and pentavalent high field strength elements on the M1 site are also measured when the average charge on this site is increased by the substitution of divalent cations by Alvi. In contrast, due to these charge balance requirements, divalent transitional elements become less compatible within the crystal lattice. On the basis of the lattice strain theory, we document that the incorporation of rare earth elements and yttrium in clinopyroxene is influenced by both compositional and physical parameters. Data from this study allow to update existing partitioning equations for rare earth elements in order to construct a self-consistent model for trachy-phonolitic magmas based on the lattice strain theory. The application of this model to natural products from the Campanian Ignimbrite, the largest caldera-forming eruption at the Campi Flegrei, reveals that the complex rare earth element pattern recorded by the eruptive products can be successfully described by the stepwise fractional crystallization of clinopyroxene and feldspar where the clinopyroxene-melt partition coefficient changes progressively as a function of the physicochemical conditions of the system.

  14. Partitioning of Nb, Mo, Ba, Ce, Pb, Th and U between immiscible carbonate and silicate liquids: Evaluating the effects of P2O5,F, and carbonate composition

    NASA Technical Reports Server (NTRS)

    Jones, J. H.; Walker, D.

    1993-01-01

    Previously we have reported carbonate liq./silicate liq. partition coefficients (D) for a standard suite of trace elements (Nb, Mo, Ba, Ce, Pb, Th, and U) and Ra and Pa as well. In brief, we have found that immiscible liquid partitioning is a strong function of temperature. As the critical temperature of the carbonate-silicate solvus is approached, all partition coefficients approach unity. Additionally, for the overwhelming majority of the partitioning elements, InD is a linear function of 'ionic field strength,' z/r, where z is the charge of the partitioned cation and r is its ionic radius.

  15. Power-law partition and entropy production of high-energy cosmic rays: Knee-ankle structure of the all-particle spectrum

    NASA Astrophysics Data System (ADS)

    Tomaschitz, Roman

    2013-10-01

    A statistical description of the all-particle cosmic-ray spectrum is given in the 10^{14}\\ \\text{eV} to 10^{20}\\ \\text{eV} interval. The high-energy cosmic-ray flux is modeled as an ultra-relativistic multi-component plasma, whose components constitute a mixture of nearly ideal but nonthermal gases of low density and high temperature. Each plasma component is described by an ultra-relativistic power-law density manifested as spectral peak in the wideband fit. The “knee” and “ankle” features of the high- and ultra-high-energy spectrum turn out to be the global and local extrema of the double-logarithmic E3-scaled flux representation in which the spectral fit is performed. The all-particle spectrum is covered by recent data sets from several air shower arrays, and can be modeled as three-component plasma in the indicated energy range extending over six decades. The temperature, specific number density, internal energy and entropy of each plasma component are extracted from the partial fluxes in the broadband fit. The grand partition function and the extensive entropy functional of a non-equilibrated gas mixture with power-law components are derived in phase space by ensemble averaging.

  16. The production of recombinant cationic α-helical antimicrobial peptides in plant cells induces the formation of protein bodies derived from the endoplasmic reticulum.

    PubMed

    Company, Nuri; Nadal, Anna; La Paz, José-Luis; Martínez, Sílvia; Rasche, Stefan; Schillberg, Stefan; Montesinos, Emilio; Pla, Maria

    2014-01-01

    Synthetic linear antimicrobial peptides with cationic α-helical structures, such as BP100, are valuable as novel therapeutics and preservatives. However, they tend to be toxic when expressed at high levels as recombinant peptides in plants, and they can be difficult to detect and isolate from complex plant tissues because they are strongly cationic and display low extinction coefficient and extremely limited immunogenicity. We therefore expressed BP100 with a C-terminal tag which preserved its antimicrobial activity and demonstrated significant accumulation in plant cells. We used a fluorescent tag to trace BP100 following transiently expression in Nicotiana benthamiana leaves and showed that it accumulated in large vesicles derived from the endoplasmic reticulum (ER) along with typical ER luminal proteins. Interestingly, the formation of these vesicles was induced by BP100. Similar vesicles formed in stably transformed Arabidopsis thaliana seedlings, but the recombinant peptide was toxic to the host during latter developmental stages. This was avoided by selecting active BP100 derivatives based on their low haemolytic activity even though the selected peptides remained toxic to plant cells when applied exogenously at high doses. Using this strategy, we generated transgenic rice lines producing active BP100 derivatives with a yield of up to 0.5% total soluble protein. PMID:24102775

  17. Chemical amplification based on fluid partitioning

    DOEpatents

    Anderson, Brian L.; Colston, Jr., Billy W.; Elkin, Chris

    2006-05-09

    A system for nucleic acid amplification of a sample comprises partitioning the sample into partitioned sections and performing PCR on the partitioned sections of the sample. Another embodiment of the invention provides a system for nucleic acid amplification and detection of a sample comprising partitioning the sample into partitioned sections, performing PCR on the partitioned sections of the sample, and detecting and analyzing the partitioned sections of the sample.

  18. Cationically polymerizable monomers derived from renewable sources

    SciTech Connect

    Crivello, J.V.

    1991-10-01

    The objective of this project is to make use of products obtained from renewable plant sources as monomers for the direct production of polymers which can be used for a wide range of plastic applications. In this report is described progress in the synthesis and polymerization of cationically polymerizable monomers and oligomers derived from botanical oils, terpenes, natural rubber, and lignin. Nine different botanical oils were obtained from various sources, characterized and then epoxidized. Their photopolymerization was carried out using cationic photoinitiators and the mechanical properties of the resulting polymers characterized. Preliminary biodegradation studies are being conducted on the photopolymerized films from several of these oils. Limonene was cationically polymerized to give dimers and the dimers epoxidized to yield highly reactive monomers suitable for coatings, inks and adhesives. The direct phase transfer epoxidation of squalene and natural rubber was carried out. The modified rubbers undergo facile photocrosslinking in the presence of onium salts to give crosslinked elastomers. 12 refs., 3 figs., 10 tabs.

  19. Cationically polymerizable monomers derived from renewable sources. Final report

    SciTech Connect

    1995-09-01

    Objective is to use products from plant sources as monomers for direct production of polymers for plastic applications. (Epoxidized triglycerides as renewable monomers in photoinitiated cationic polymerization.) High-volume American agricultural products such as soybean, cotton or linseed oils or forestry products such as lignin and cellulose derived chemicals were targeted for use either directly or with slight modification for producing the plastics. Cationic photopolymerization will be used.

  20. Studies of the Partitioning of Glyoxal into Atmospheric Particulates

    NASA Astrophysics Data System (ADS)

    Liggio, J.; McLaren, R.; Li, S.

    2003-12-01

    The organic composition of atmospheric aerosols is an area of very active research. Recent research has tried to elucidate possible mechanisms for incorporation of semi-volatile and volatile carbonyl products in particulates, almost all involving some sort of heterogeneous chemical reaction of carbonyl products to form less volatile species that are stabilized in the particle phase. These mechanisms include organic hydration, formation of hemiacetals and acetals, aldol condensations, and polymerization. In order to study the partitioning behaviour of volatile organic carbonyls, we have designed a 2 m3 teflon reaction chamber that uses a differential mobility analyzer - condensation nuclei counter for monitoring the physical properties of particles, an aerosol mass spectrometer (AMS) for monitoring the chemical composition of the particles and an automated DNPH cartridge/HPLC system for monitoring the gaseous composition inside the chamber. In this paper, we will discuss experiments that explore the physical and chemical characteristics of particles formed from the growth of seed particles ((NH4)2SO4, (NH4)HSO4, H2SO4, NaNO3, and NaCl) in the presence of gaseous glyoxal. The unique highlight of this system is the use of the AMS, which gives us a sensitive probe of changes in the chemical content of the particles as a function of time. The particle growth was rapid and significant and appears to be acid catalyzed, but is otherwise independent of the cationic content of the seed. Evidence is presented for the formation of hydrated glyoxal monomer, dimers, trimers and possibly higher order species. Possible mechanisms and mass spectrometric evidence will be discussed.

  1. Cation-coupled bicarbonate transporters.

    PubMed

    Aalkjaer, Christian; Boedtkjer, Ebbe; Choi, Inyeong; Lee, Soojung

    2014-10-01

    Cation-coupled HCO3(-) transport was initially identified in the mid-1970s when pioneering studies showed that acid extrusion from cells is stimulated by CO2/HCO3(-) and associated with Na(+) and Cl(-) movement. The first Na(+)-coupled bicarbonate transporter (NCBT) was expression-cloned in the late 1990s. There are currently five mammalian NCBTs in the SLC4-family: the electrogenic Na,HCO3-cotransporters NBCe1 and NBCe2 (SLC4A4 and SLC4A5 gene products); the electroneutral Na,HCO3-cotransporter NBCn1 (SLC4A7 gene product); the Na(+)-driven Cl,HCO3-exchanger NDCBE (SLC4A8 gene product); and NBCn2/NCBE (SLC4A10 gene product), which has been characterized as an electroneutral Na,HCO3-cotransporter or a Na(+)-driven Cl,HCO3-exchanger. Despite the similarity in amino acid sequence and predicted structure among the NCBTs of the SLC4-family, they exhibit distinct differences in ion dependency, transport function, pharmacological properties, and interactions with other proteins. In epithelia, NCBTs are involved in transcellular movement of acid-base equivalents and intracellular pH control. In nonepithelial tissues, NCBTs contribute to intracellular pH regulation; and hence, they are crucial for diverse tissue functions including neuronal discharge, sensory neuron development, performance of the heart, and vascular tone regulation. The function and expression levels of the NCBTs are generally sensitive to intracellular and systemic pH. Animal models have revealed pathophysiological roles of the transporters in disease states including metabolic acidosis, hypertension, visual defects, and epileptic seizures. Studies are being conducted to understand the physiological consequences of genetic polymorphisms in the SLC4-members, which are associated with cancer, hypertension, and drug addiction. Here, we describe the current knowledge regarding the function, structure, and regulation of the mammalian cation-coupled HCO3(-) transporters of the SLC4-family. PMID:25428855

  2. Cation-Coupled Bicarbonate Transporters

    PubMed Central

    Aalkjaer, Christian; Boedtkjer, Ebbe; Choi, Inyeong; Lee, Soojung

    2016-01-01

    Cation-coupled HCO3− transport was initially identified in the mid-1970s when pioneering studies showed that acid extrusion from cells is stimulated by CO2/HCO3− and associated with Na+ and Cl− movement. The first Na+-coupled bicarbonate transporter (NCBT) was expression-cloned in the late 1990s. There are currently five mammalian NCBTs in the SLC4-family: the electrogenic Na,HCO3-cotransporters NBCe1 and NBCe2 (SLC4A4 and SLC4A5 gene products); the electroneutral Na,HCO3-cotransporter NBCn1 (SLC4A7 gene product); the Na+-driven Cl,HCO3-exchanger NDCBE (SLC4A8 gene product); and NBCn2/NCBE (SLC4A10 gene product), which has been characterized as an electroneutral Na,HCO3-cotransporter or a Na+-driven Cl,HCO3-exchanger. Despite the similarity in amino acid sequence and predicted structure among the NCBTs of the SLC4-family, they exhibit distinct differences in ion dependency, transport function, pharmacological properties, and interactions with other proteins. In epithelia, NCBTs are involved in transcellular movement of acid-base equivalents and intracellular pH control. In nonepithelial tissues, NCBTs contribute to intracellular pH regulation; and hence, they are crucial for diverse tissue functions including neuronal discharge, sensory neuron development, performance of the heart, and vascular tone regulation. The function and expression levels of the NCBTs are generally sensitive to intracellular and systemic pH. Animal models have revealed pathophysiological roles of the transporters in disease states including metabolic acidosis, hypertension, visual defects, and epileptic seizures. Studies are being conducted to understand the physiological consequences of genetic polymorphisms in the SLC4-members, which are associated with cancer, hypertension, and drug addiction. Here, we describe the current knowledge regarding the function, structure, and regulation of the mammalian cation-coupled HCO3− transporters of the SLC4-family. PMID:25428855

  3. Partitioning of Ni, Co and V between Spinel-Structured Oxides and Silicate Melts: Importance of Spinel Composition

    NASA Technical Reports Server (NTRS)

    Righter, K.; Leeman, W. P.; Hervig, R. L.

    2006-01-01

    Partitioning of Ni, Co and V between Cr-rich spinels and basaltic melt has been studied experimentally between 1150 and 1325 C, and at controlled oxygen fugacity from the Co-CoO buffer to slightly above the hematite magnetite buffer. These new results, together with new Ni, Co and V analyses of experimental run products from Leeman [Leeman, W.P., 1974. Experimental determination of the partitioning of divalent cations between olivine and basaltic liquid, Pt. II. PhD thesis, Univ. Oregon, 231 - 337.], show that experimentally determined spinel melt partition coefficients (D) are dependent upon temperature (T), oxygen fugacity (fO2) and spinel composition. In particular, partition coefficients determined on doped systems are higher than those in natural (undoped) systems, perhaps due to changing activity coefficients over the composition range defined by the experimental data. Using our new results and published runs (n =85), we obtain a multilinear regression equation that predicts experimental D(V) values as a function of T, fO2, concentration of V in melt and spinel composition. This equation allows prediction of D(V) spinel/melt values for natural mafic liquids at relevant crystallization conditions. Similarly, D(Ni) and D(Co) values can be inferred from our experiments at redox conditions approaching the QFM buffer, temperatures of 1150 to 1250 C and spinel composition (early Cr-bearing and later Ti-magnetite) appropriate for basic magma differentiation. When coupled with major element modelling of liquid lines of descent, these values (D(Ni) sp/melt=10 and D(Co) sp/melt=5) closely reproduce the compositional variation observed in komatiite, mid-ocean ridge basalt (MORB), ocean island basalt (OIB) and basalt to rhyolite suites.

  4. Cationically polymerizable monomers derived from renewable sources

    SciTech Connect

    Crivello, J.V.

    1992-10-01

    The objectives of this project are to design and synthesize novel monomers which orginate from renewable biological sources and to carry out their rapid, efficient, pollution-free and energy efficient cationic polymerization to useful products under the influence of ultraviolet light or heat. A summary of the results of the past year's research on cationically polymerizable monomers derived from renewable sources is presented. Three major areas of investigation corresponding to the different classes of naturally occurring starting materials were investigated; epoxidized terpenes and natural rubber and vinyl ethers from alcohols and carbohydrates.

  5. Adsorption of reovirus to clay minerals: effects of cation-exchange capacity, cation saturation, and surface area.

    PubMed Central

    Lipson, S M; Stotzky, G

    1983-01-01

    The adsorption of reovirus to clay minerals has been reported by several investigators, but the mechanisms defining this association have been studied only minimally. The purpose of this investigation was to elucidate the mechanisms involved with this interaction. More reovirus type 3 was adsorbed, in both distilled and synthetic estuarine water, by low concentrations of montmorillonite than by comparable concentrations of kaolinite containing a mixed complement of cations on the exchange complex. Adsorption to the clays was essentially immediate and was correlated with the cation-exchange capacity of the clays, indicating that adsorption was primarily to negatively charged sites on the clays. Adsorption was greater with low concentrations of clays in estuarine water than in distilled water, as the higher ionic strength of the estuarine water reduced the electrokinetic potential of both clay and virus particles. The addition of cations (as chloride salts) to distilled water enhanced adsorption, with divalent cations being more effective than monovalent cations and 10(-2) M resulting in more adsorption than 10(-3) M. Potassium ions suppressed reovirus adsorption to montmorillonite, probably by collapsing the clay lattices and preventing the expression of the interlayer-derived cation-exchange capacity. More virus was adsorbed by montmorillonite made homoionic to various mono-, di-, and trivalent cations (except by montmorillonite homoionic to potassium) than by comparable concentrations of kaolinite homoionic to the same cations. The sequence of the amount of adsorption to homoionic montmorillonite was Al greater than Ca greater than Mg greater than Na greater than K; the sequence of adsorption to kaolinite was Na greater than Al greater than Ca greater than Mg greater than K. The constant partition-type adsorption isotherms obtained when the clay concentration was maintained constant and the virus concentration was varied indicated that a fixed proportion of the

  6. Cationic Lipid-Based Nucleic Acid Vectors.

    PubMed

    Jubeli, Emile; Goldring, William P D; Pungente, Michael D

    2016-01-01

    The delivery of nucleic acids into cells remains an important laboratory cell culture technique and potential clinical therapy, based upon the initial cellular uptake, then translation into protein (in the case of DNA), or gene deletion by RNA interference (RNAi). Although viral delivery vectors are more efficient, the high production costs, limited cargo capacity, and the potential for clinical adverse events make nonviral strategies attractive. Cationic lipids are the most widely applied and studied nonviral vectors; however, much remains to be solved to overcome limitations of these systems. Advances in the field of cationic lipid-based nucleic acid (lipoplex) delivery rely upon the development of robust and reproducible lipoplex formulations, together with the use of cell culture assays. This chapter provides detailed protocols towards the formulation, delivery, and assessment of in vitro cationic lipid-based delivery of DNA. PMID:27436310

  7. Partitioning Rectangular and Structurally Nonsymmetric Sparse Matrices for Parallel Processing

    SciTech Connect

    B. Hendrickson; T.G. Kolda

    1998-09-01

    A common operation in scientific computing is the multiplication of a sparse, rectangular or structurally nonsymmetric matrix and a vector. In many applications the matrix- transpose-vector product is also required. This paper addresses the efficient parallelization of these operations. We show that the problem can be expressed in terms of partitioning bipartite graphs. We then introduce several algorithms for this partitioning problem and compare their performance on a set of test matrices.

  8. Specific ion interactions with aromatic rings in aqueous solutions: Comparison of molecular dynamics simulations with a thermodynamic solute partitioning model and Raman spectroscopy

    NASA Astrophysics Data System (ADS)

    Vincent, Jordan C.; Matt, Sarah M.; Rankin, Blake M.; D'Auria, Raffaella; Freites, J. Alfredo; Ben-Amotz, Dor; Tobias, Douglas J.

    2015-10-01

    Specific ion interactions of KF, and the Na+ salts of SO42-, F-, Cl-, NO3-, I-, and ClO4- with benzene in aqueous solutions were investigated using molecular dynamics simulations and compared with experimental Raman multivariate curve resolution (Raman-MCR) and thermodynamic results. Good agreement is found with the hydration-shell partition coefficients of salts obtained from the thermodynamic analysis and of halogen anions obtained from the Raman-MCR spectra of benzene and pyridine. Larger discrepancies between the simulation and thermodynamic cation partitioning results point to the influence of counter-ion interaction on cation partitioning.

  9. Phase II Nuclide Partition Laboratory Study Influence of Cellulose Degradation Products on the Transport of Nuclides from SRS Shallow Land Burial Facilities

    SciTech Connect

    Serkiz, S.M.

    1999-10-04

    Degradation products of cellulosic materials (e.g., paper and wood products) can significantly influence the subsurface transport of metals and radionuclides. Codisposal of radionuclides with cellulosic materials in the E-Area slit trenches at the Savannah River Site (SRS) is, therefore, expected to influence nuclide fate and transport in the subsurface. Due to the complexities of these systems and the scarcity of site-specific data, the effects of cellulose waste loading and its subsequent influence on nuclide transport are not well established.

  10. A brief history of partitions of numbers, partition functions and their modern applications

    NASA Astrophysics Data System (ADS)

    Debnath, Lokenath

    2016-04-01

    'Number rules the universe.' The Pythagoras 'If you wish to forsee the future of mathematics our course is to study the history and present conditions of the science.' Henri Poincaré 'The primary source (Urqell) of all mathematics are integers.' Hermann Minkowski This paper is written to commemorate the centennial anniversary of the Mathematical Association of America. It deals with a short history of different kinds of natural numbers including triangular, square, pentagonal, hexagonal and k-gonal numbers, and their simple properties and their geometrical representations. Included are Euclid's and Pythagorean's main contributions to elementary number theory with the main contents of the Euclid Elements of the 13-volume masterpiece of mathematical work. This is followed by Euler's new discovery of the additive number theory based on partitions of numbers. Special attention is given to many examples, Euler's theorems on partitions of numbers with geometrical representations of Ferrers' graphs, Young's diagrams, Lagrange's four-square theorem and the celebrated Waring problem. Included are Euler's generating functions for the partitions of numbers, Euler's pentagonal number theorem, Gauss' triangular and square number theorems and the Jacobi triple product identity. Applications of the theory of partitions of numbers to different statistics such as the Bose- Einstein, Fermi- Dirac, Gentile, and Maxwell- Boltzmann statistics are briefly discussed. Special attention is given to pedagogical information through historical approach to number theory so that students and teachers at the school, college and university levels can become familiar with the basic concepts of partitions of numbers, partition functions and their modern applications, and can pursue advanced study and research in analytical and computational number theory.

  11. Photosynthesis and assimilate partitioning between carbohydrates and isoprenoid products in vegetatively active and dormant guayule: physiological and environmental constraints on rubber accumulation in a semiarid shrub

    Technology Transfer Automated Retrieval System (TEKTRAN)

    The stems and roots of the desert shrub guayule, Parthenium argentatum, contain a significant amount of latex that can be used as a source of natural rubber. Photosynthesis and the levels of carbohydrates and volatile isoprenoid products were measured in guayule plants grown under simulated summer-...

  12. Quantum field theory of partitions

    SciTech Connect

    Bender, C.M.; Brody, D.C.; Meister, B.K.

    1999-07-01

    Given a sequence of numbers {l_brace}a{sub n}{r_brace}, it is always possible to find a set of Feynman rules that reproduce that sequence. For the special case of the partitions of the integers, the appropriate Feynman rules give rise to graphs that represent the partitions in a clear pictorial fashion. These Feynman rules can be used to generate the Bell numbers B(n) and the Stirling numbers S(n,k) that are associated with the partitions of the integers. {copyright} {ital 1999 American Institute of Physics.}

  13. Probabilistic framework for network partition

    NASA Astrophysics Data System (ADS)

    Li, Tiejun; Liu, Jian; E, Weinan

    2009-08-01

    Given a large and complex network, we would like to find the partition of this network into a small number of clusters. This question has been addressed in many different ways. In a previous paper, we proposed a deterministic framework for an optimal partition of a network as well as the associated algorithms. In this paper, we extend this framework to a probabilistic setting, in which each node has a certain probability of belonging to a certain cluster. Two classes of numerical algorithms for such a probabilistic network partition are presented and tested. Application to three representative examples is discussed.

  14. Eaton's reagent-mediated domino π-cationic arylations of aromatic carboxylic acids to Iasi-red polymethoxylated polycyclic aromatic hydrocarbons: products with unprecedented biological activities as tubulin polymerization inhibitors.

    PubMed

    Ghinet, Alina; Gautret, Philippe; Hijfte, Nathalie Van; Ledé, Bertrand; Hénichart, Jean-Pierre; Bîcu, Elena; Darbost, Ulrich; Rigo, Benoît; Daïch, Adam

    2014-08-01

    A rapid domino π-cationic arylation of aromatic carboxylic acids, mediated by Eaton's reagent, has been developed for the synthesis of Iasi-red polymethoxylated polycyclic aromatic hydrocarbons (PAHs). This route is currently the easiest method to obtain such popular PAH compounds, which bear in addition numerous methoxy groups. The domino process was generalized, the structure of the obtained red products and the mechanism of their formations were elucidated, and some of their photophysical properties were determined. Newly synthesized polymethoxylated-PAHs were tested for their interaction with tubulin polymerization as well as for their cytotoxicity on a panel of NCI-60 human cancer cell lines. Interestingly, one of these rubicene derivatives exhibited remarkable cytotoxicity in vitro, including inhibition of leukemia, colon, melanoma, CNS, and ovarian cancer cell lines with GI50 values in the low nanomolar range (GI50 < 10 nM). PMID:25042333

  15. Charge balancing of trivalent trace elements in olivine and low-Ca pyroxene - A test using experimental partitioning data

    NASA Technical Reports Server (NTRS)

    Colson, R. O.; Taylor, L. A.; Mckay, G. A.

    1989-01-01

    Charge-balancing substitution mechanisms are determined for the incorporation of the trivalent cations Al and Sc in low-Ca pyroxene and Al, Sc, Yb, and Cr in olivine. In low-Ca pyroxene, the substitution mechanism is determined by evaluating covariations of trivalent trace cations with Si, Mg, Fe, and Ca. In olivine, substitution mechanisms are determined by comparing the observed compositional dependence of partitioning to the compositional dependence theoretically expected for each substitution reaction. A realistic equilibrium constant is formulated for trace element exchanges between olivines, low-Ca pyroxenes, and melt, making possible improved modeling of the variations of trace element partitioning with temperature and phase composition.

  16. Graph Partitioning and Sequencing Software

    Energy Science and Technology Software Center (ESTSC)

    1995-09-19

    Graph partitioning is a fundemental problem in many scientific contexts. CHACO2.0 is a software package designed to partition and sequence graphs. CHACO2.0 allows for recursive application of several methods for finding small edge separators in weighted graphs. These methods include inertial, spectral, Kernighan Lin and multilevel methods in addition to several simpler strategies. Each of these approaches can be used to partition the graph into two, four, or eight pieces at each level of recursion.more » In addition, the Kernighan Lin method can be used to improve partitions generated by any of the other algorithms. CHACO2.0 can also be used to address various graph sequencing problems, with applications to scientific computing, database design, gene sequencing and other problems.« less

  17. Patterns of Plant Biomass Partitioning Depend on Nitrogen Source

    PubMed Central

    Cambui, Camila Aguetoni; Svennerstam, Henrik; Gruffman, Linda; Nordin, Annika; Ganeteg, Ulrika; Näsholm, Torgny

    2011-01-01

    Nitrogen (N) availability is a strong determinant of plant biomass partitioning, but the role of different N sources in this process is unknown. Plants inhabiting low productivity ecosystems typically partition a large share of total biomass to belowground structures. In these systems, organic N may often dominate plant available N. With increasing productivity, plant biomass partitioning shifts to aboveground structures, along with a shift in available N to inorganic forms of N. We tested the hypothesis that the form of N taken up by plants is an important determinant of plant biomass partitioning by cultivating Arabidopsis thaliana on different N source mixtures. Plants grown on different N mixtures were similar in size, but those supplied with organic N displayed a significantly greater root fraction. 15N labelling suggested that, in this case, a larger share of absorbed organic N was retained in roots and split-root experiments suggested this may depend on a direct incorporation of absorbed amino acid N into roots. These results suggest the form of N acquired affects plant biomass partitioning and adds new information on the interaction between N and biomass partitioning in plants. PMID:21544211

  18. MLKL forms cation channels

    PubMed Central

    Xia, Bingqing; Fang, Sui; Chen, Xueqin; Hu, Hong; Chen, Peiyuan; Wang, Huayi; Gao, Zhaobing

    2016-01-01

    The mixed lineage kinase domain-like (MLKL) protein is a key factor in tumor necrosis factor-induced necroptosis. Recent studies on necroptosis execution revealed a commitment role of MLKL in membrane disruption. However, our knowledge of how MLKL functions on membrane remains very limited. Here we demonstrate that MLKL forms cation channels that are permeable preferentially to Mg2+ rather than Ca2+ in the presence of Na+ and K+. Moreover, the N-terminal domain containing six helices (H1-H6) is sufficient to form channels. Using the substituted cysteine accessibility method, we further determine that helix H1, H2, H3, H5 and H6 are transmembrane segments, while H4 is located in the cytoplasm. Finally, MLKL-induced membrane depolarization and cell death exhibit a positive correlation to its channel activity. The Mg2+-preferred permeability and five transmembrane segment topology distinguish MLKL from previously identified Mg2+-permeable channels and thus establish MLKL as a novel class of cation channels. PMID:27033670

  19. Dynamics of poly(4-hydroxystyrene) radical cation

    NASA Astrophysics Data System (ADS)

    Okamoto, Kazumasa; Kozawa, Takahiro; Tagawa, Seiichi

    2008-03-01

    Poly(4-hydroxystyrene) (PHS) has been used in KrF excimer laser (248 nm) lithography as a backbone polymer, and is also a promising material for EUV or electron beam lithography. Analysis of the intermediate species is important for the control of reactions in resist materials. Since the size of integrated circuits fabricated for mass production will decrease below 30 nm and the size error must also be decreased to the molecular level, the elucidation of proton dynamics at the molecular level is also important for reducing the deviation of the resist pattern size. In this study, the dynamics of PHS radical cations were studied, because PHS radical cation is main source of proton. The transient absorption of PHS was observed in the near-infrared region (NIR) in p-dioxane solutions by pulse radiolysis. The intramolecular PHS dimer radical cation (M2 +.) were observed, whereas p-cresol shows no distinct CR band. Although the radical cations of phenol derivatives are known to be easily deprotonated, it was found that M2 +. formation prevents deprotonation by its charge resonance stabilization.

  20. Sn Cation Valency Dependence in Cation Exchange Reactions Involving Cu2-xSe Nanocrystals

    PubMed Central

    2014-01-01

    We studied cation exchange reactions in colloidal Cu2-xSe nanocrystals (NCs) involving the replacement of Cu+ cations with either Sn2+ or Sn4+ cations. This is a model system in several aspects: first, the +2 and +4 oxidation states for tin are relatively stable; in addition, the phase of the Cu2-xSe NCs remains cubic regardless of the degree of copper deficiency (that is, “x”) in the NC lattice. Also, Sn4+ ions are comparable in size to the Cu+ ions, while Sn2+ ones are much larger. We show here that the valency of the entering Sn ions dictates the structure and composition not only of the final products but also of the intermediate steps of the exchange. When Sn4+ cations are used, alloyed Cu2–4ySnySe NCs (with y ≤ 0.33) are formed as intermediates, with almost no distortion of the anion framework, apart from a small contraction. In this exchange reaction the final stoichiometry of the NCs cannot go beyond Cu0.66Sn0.33Se (that is Cu2SnSe3), as any further replacement of Cu+ cations with Sn4+ cations would require a drastic reorganization of the anion framework, which is not possible at the reaction conditions of the experiments. When instead Sn2+ cations are employed, SnSe NCs are formed, mostly in the orthorhombic phase, with significant, albeit not drastic, distortion of the anion framework. Intermediate steps in this exchange reaction are represented by Janus-type Cu2-xSe/SnSe heterostructures, with no Cu–Sn–Se alloys. PMID:25340627

  1. 4-Spiro[2.n]alkyl cations and their rearrangements.

    PubMed

    Prakash, G K; Fung, A P; Olah, G A; Rawdah, T N

    1987-08-01

    A series of 4-spiro[2.n]alkanols, where n = 3-7, were ionized in either FSO3H x SbF5/SO2ClF or SbF5/SO2ClF at -78 degrees C and -130 degrees C. The resulting solutions were studied by 13C NMR spectroscopy over the temperature range of -130 degrees C to -10 degrees C. The 4-spiro[2.5]octanol gave the expected static 4-spiro[2.5]octyl cation, which can be considered as a long-lived secondary cyclohexyl cation stabilized by an adjacent spirocyclopropane ring. The same spiro[2.5]octyl cation was also obtained by ionization of isomeric bicyclo[4.2.0]octan-1-ol and bicyclo[4.1.0]heptyl-1-methanol. The static spiro[2.5]-octyl cation was found to rearrange to the equilibrating 1-bicyclo[3.3.0]octyl cation above -10 degrees C. On the other hand, the 4-spiro[2.4]heptanol gave the rearranged 1-methylcyclohexenyl cation. The spiro[2.6]nonanol gave directly the equilibrating 1-bicyclo[4.3.0]nonyl cation. The other 4-spiro[2.n]-alkanols (n = 3 and 7) gave unidentifiable polymeric products. The ionization of 3-spirocyclopropyl-2-norbornanol yields only the rearranged 2-methylbicyclo[3.2.1]oct-3-ene-2-yl cation. PMID:3474642

  2. 4-Spiro[2.n]alkyl cations and their rearrangements.

    PubMed Central

    Prakash, G K; Fung, A P; Olah, G A; Rawdah, T N

    1987-01-01

    A series of 4-spiro[2.n]alkanols, where n = 3-7, were ionized in either FSO3H x SbF5/SO2ClF or SbF5/SO2ClF at -78 degrees C and -130 degrees C. The resulting solutions were studied by 13C NMR spectroscopy over the temperature range of -130 degrees C to -10 degrees C. The 4-spiro[2.5]octanol gave the expected static 4-spiro[2.5]octyl cation, which can be considered as a long-lived secondary cyclohexyl cation stabilized by an adjacent spirocyclopropane ring. The same spiro[2.5]octyl cation was also obtained by ionization of isomeric bicyclo[4.2.0]octan-1-ol and bicyclo[4.1.0]heptyl-1-methanol. The static spiro[2.5]-octyl cation was found to rearrange to the equilibrating 1-bicyclo[3.3.0]octyl cation above -10 degrees C. On the other hand, the 4-spiro[2.4]heptanol gave the rearranged 1-methylcyclohexenyl cation. The spiro[2.6]nonanol gave directly the equilibrating 1-bicyclo[4.3.0]nonyl cation. The other 4-spiro[2.n]-alkanols (n = 3 and 7) gave unidentifiable polymeric products. The ionization of 3-spirocyclopropyl-2-norbornanol yields only the rearranged 2-methylbicyclo[3.2.1]oct-3-ene-2-yl cation. PMID:3474642

  3. Fragmentation Pathways in the Uracil Radical Cation

    SciTech Connect

    Zhou, Congyi; Matsika, Spiridoula; Kotur, Marija; Weinacht, Thomas C.

    2012-08-24

    We investigate pathways for fragmentation in the uracil radical cation using ab initio electronic structure calculations. We focus on the main fragments produced in pump–probe dissociative ionization experiments. These are fragments with mass to charge ratios (m/z) of 69, 28, 41, and 42. Barriers to dissociation along the ground ionic surface are reported, which provide an estimate of the energetic requirements for the production of the main fragments. Finally, direct and sequential fragmentation mechanisms have been analyzed, and it is concluded that sequential fragmentation after production of fragment with m/z 69 is the dominant mechanism for the production of the smaller fragments.

  4. Problems with the process partitioning theory of stratocumulus entrainment

    NASA Technical Reports Server (NTRS)

    Randall, D. A.

    1984-01-01

    Three different approaches to partitioning were proposed. Ball (1960), Lilly (1968), and Deardorff et al. (1969, 1974) considered the sign of the net buoyancy flux at each level. If the net flux is positive, it is counted as TKE producing; otherwise, it is counted as TKE consuming. This approach can be called Eulerian partitioning. The second approach can be called process partitioning. It is assumed that the various processes acting in concert each produce and consume the same energy as if they acted independently (Manins and Turner, 1978). The total rates of TKE production and consumption are obtained by summing the effects of all the forcing processes. The third approach is Lagrangian partitioning. Each air parcel is considered as either producing or consuming TKE, according to the sign of the product of its density and vertical velocity anomalies. Stage and Businger (1981a,b) have applied process partitioning to the cloud topped mixed layer. One of the most important processes influencing entrainment into such a layer is cloud top radiative cooling. The production and consumption due to entrainment and radiative cooling are thus closely related. Model results are sensitive to the choice of formulation.

  5. ESR study of the aziridine and azetidine radical cations: evidence for the C. C ring-opened aziridine radical cation

    SciTech Connect

    Qin, X.Z.; Williams, F.

    1986-05-22

    The radical cations from aziridine and azetidine have been characterized by ESR spectroscopy following their generation in the solid state by ..gamma.. irradiation of dilute solutions of the parent compounds in the CFCl/sub 3/ matrix at 77 K. The ESR parameters of the azetidine radical cation are typical of those for nitrogen-centered amine radical cations such as Me/sub 2/NH*/sup +/. On the other hand, the radical cation formed from aziridine has very different ESR parameters that compare closely to those for the isoelectronic C...C ring-opened form of the oxirane radical cation and the allyl radical. The radical cation formed from azetidine is therefore assigned a ring-closed structure with the unpaired electron in a 2p/sub z/ orbital on nitrogen perpendicular to the ring plane, whereas the cation from aziridine is an allylic C...C ring-opened planar isomer with the unpaired electron in a nonbonding ..pi.. orbital centered mainly on the two end carbon atoms. The neutral 1-aziridinyl and 1-azetidinyl radicals have been detected as radical products following the ..gamma.. irradiation of the parent compounds in the CFCl/sub 2/CF/sub 2/Cl and CF/sub 3/CCl/sub 3/ matrices. In particular, the 1-azetidinyl radical is produced cleanly from the azetidine radical cation in the CFCl/sub 2/CF/sub 2/Cl matrix at ca. 100 K.

  6. Partitioned aquaculture systems

    Technology Transfer Automated Retrieval System (TEKTRAN)

    Conventional aquaculture ponds provide a number of ecological services supporting fish and shellfish production. The pond provides confinement space for the aquatic organisms, while algal growth in the pond serves as the base of an aquatic food chain providing some or all of the feed, depending on p...

  7. Partitioned pond aquaculture systems

    Technology Transfer Automated Retrieval System (TEKTRAN)

    World aquaculture is dominated by the use of simple earthen ponds in which suitable water quality is maintained by photosynthetic processes. Relying upon sunlight to maintain water quality offers the lowest cost and most sustainable approach to fish or shellfish production, which explains the popula...

  8. New Instrumentation for Phase Partitioning

    NASA Technical Reports Server (NTRS)

    Harris, J. M.

    1985-01-01

    Cells and molecules can be purified by partitioning between the two immiscible liquid phases formed by aqueous solutions of poly/ethylene glycol and dextran. Such purification can be more selective, higher yielding, and less destructive to sensitive biological materials than other available techniques. Earth's gravitational field is a hindering factor as it causes sedimentation of particles to be purified and shear-induced particle randomization. The present proposal is directed toward developing new instrumentation for performing phase partitioning both on Earth and in microgravity.

  9. Rectilinear partitioning of irregular data parallel computations

    NASA Technical Reports Server (NTRS)

    Nicol, David M.

    1991-01-01

    New mapping algorithms for domain oriented data-parallel computations, where the workload is distributed irregularly throughout the domain, but exhibits localized communication patterns are described. Researchers consider the problem of partitioning the domain for parallel processing in such a way that the workload on the most heavily loaded processor is minimized, subject to the constraint that the partition be perfectly rectilinear. Rectilinear partitions are useful on architectures that have a fast local mesh network. Discussed here is an improved algorithm for finding the optimal partitioning in one dimension, new algorithms for partitioning in two dimensions, and optimal partitioning in three dimensions. The application of these algorithms to real problems are discussed.

  10. Dissecting the cation-cation interaction between two uranyl units.

    PubMed

    Tecmer, Paweł; Hong, Sung W; Boguslawski, Katharina

    2016-07-21

    We present a state-of-the-art computational study of the uranyl(vi) and uranyl(v) cation-cation interactions (dications) in aqueous solution. Reliable electronic structures of two interacting uranyl(vi) and uranyl(v) subunits as well as those of the uranyl(vi) and uranyl(v) clusters are presented for the first time. Our theoretical study elucidates the impact of cation-cation interactions on changes in the molecular structure as well as changes in vibrational and UV-Vis spectra of the bare uranyl(vi) and uranyl(v) moieties for different total spin-states and total charges of the dications. PMID:27335229

  11. Set covering, partition and packing

    SciTech Connect

    Hulme, B.L.; Baca, L.S.

    1984-03-01

    Set covering problems are known to be solvable by Boolean algebraic methods. This report shows that set partition and set packing problems can be solved by the same algebraic methods because these problems can be converted into covering problems. Many applications are possible including security patrol assignment which is used as an example.

  12. Monomial Crystals and Partition Crystals

    NASA Astrophysics Data System (ADS)

    Tingley, Peter

    2010-04-01

    Recently Fayers introduced a large family of combinatorial realizations of the fundamental crystal B(Λ0) for ^sln, where the vertices are indexed by certain partitions. He showed that special cases of this construction agree with the Misra-Miwa realization and with Berg's ladder crystal. Here we show that another special case is naturally isomorphic to a realization using Nakajima's monomial crystal.

  13. METAL PARTITIONING IN COMBUSTION PROCESSES

    EPA Science Inventory

    This article summarizes ongoing research efforts at the National Risk Management Research Laboratory of the U.S. Environmental Protection Agency examining [high temperature] metal behavior within combustion environments. The partitioning of non-volatile (Cr and Ni), semi-volatil...

  14. The cation-π interaction.

    PubMed

    Dougherty, Dennis A

    2013-04-16

    The chemistry community now recognizes the cation-π interaction as a major force for molecular recognition, joining the hydrophobic effect, the hydrogen bond, and the ion pair in determining macromolecular structure and drug-receptor interactions. This Account provides the author's perspective on the intellectual origins and fundamental nature of the cation-π interaction. Early studies on cyclophanes established that water-soluble, cationic molecules would forego aqueous solvation to enter a hydrophobic cavity if that cavity was lined with π systems. Important gas phase studies established the fundamental nature of the cation-π interaction. The strength of the cation-π interaction (Li(+) binds to benzene with 38 kcal/mol of binding energy; NH4(+) with 19 kcal/mol) distinguishes it from the weaker polar-π interactions observed in the benzene dimer or water-benzene complexes. In addition to the substantial intrinsic strength of the cation-π interaction in gas phase studies, the cation-π interaction remains energetically significant in aqueous media and under biological conditions. Many studies have shown that cation-π interactions can enhance binding energies by 2-5 kcal/mol, making them competitive with hydrogen bonds and ion pairs in drug-receptor and protein-protein interactions. As with other noncovalent interactions involving aromatic systems, the cation-π interaction includes a substantial electrostatic component. The six (four) C(δ-)-H(δ+) bond dipoles of a molecule like benzene (ethylene) combine to produce a region of negative electrostatic potential on the face of the π system. Simple electrostatics facilitate a natural attraction of cations to the surface. The trend for (gas phase) binding energies is Li(+) > Na(+) > K(+) > Rb(+): as the ion gets larger the charge is dispersed over a larger sphere and binding interactions weaken, a classical electrostatic effect. On other hand, polarizability does not define these interactions. Cyclohexane is

  15. The Cation-π Interaction

    PubMed Central

    DOUGHERTY, DENNIS A.

    2014-01-01

    CONSPECTUS The chemistry community now recognizes the cation-π interaction as a major force for molecular recognition, joining the hydrophobic effect, the hydrogen bond, and the ion pair in determining macromolecular structure and drug-receptor interactions. This Account provides the author’s perspective on the intellectual origins and fundamental nature of the cation-π interaction. Early studies on cyclophanes established that water-soluble, cationic molecules would forgo aqueous solvation to enter a hydrophobic cavity if that cavity was lined with π systems. Important gas phase studies established the fundamental nature of the cation-π interaction. The strength of the cation-π interaction – Li+ binds to benzene with 38 kcal/mol of binding energy; NH4+ with 19 kcal/mol– distinguishes it from the weaker polar-π interactions observed in the benzene dimer or water-benzene complexes. In addition to the substantial intrinsic strength of the cation-π interaction in gas phase studies, the cation-π interaction remains energetically significant in aqueous media and under biological conditions. Many studies have shown that cation-π interactions can enhance binding energies by 2 – 5 kcal/mol, making them competitive with hydrogen bonds and ion pairs in drug-receptor and protein-protein interactions. As with other noncovalent interactions involving aromatic systems, the cation-π interaction includes a substantial electrostatic component. The six (four) Cδ−–Hδ+ bond dipoles of a molecule like benzene (ethylene) combine to produce a region of negative electrostatic potential on the face of the π system. Simple electrostatics facilitate a natural attraction of cations to the surface. The trend for (gas phase) binding energies is Li+>Na+>K+>Rb+: as the ion gets larger the charge is dispersed over a larger sphere and binding interactions weaken, a classical electrostatic effect. On other hand, polarizability does not define these interactions. Cyclohexane

  16. Evaluation of solubility and partition properties of ampicillin-based ionic liquids.

    PubMed

    Florindo, Catarina; Araújo, João M M; Alves, Filipa; Matos, Carla; Ferraz, Ricardo; Prudêncio, Cristina; Noronha, João Paulo; Petrovski, Željko; Branco, Luís; Rebelo, Luís Paulo N; Marrucho, Isabel M

    2013-11-18

    In order to overcome the problems associated with low water solubility, and consequently low bioavailability of active pharmaceutical ingredients (APIs), herein we explore a modular ionic liquid synthetic strategy for improved APIs. Ionic liquids containing L-ampicillin as active pharmaceutical ingredient anion were prepared using the methodology developed in our previous work, using organic cations selected from substituted ammonium, phosphonium, pyridinium and methylimidazolium salts, with the intent of enhancing the solubility and bioavailability of L-ampicillin forms. In order to evaluate important properties of the synthesized API-ILs, the water solubility at 25 °C and 37 °C (body temperature) as well as octanol-water partition coefficients (Kow's) and HDPC micelles partition at 25 °C were measured. Critical micelle concentrations (CMC's) in water at 25 °C and 37 °C of the pharmaceutical ionic liquids bearing cations with surfactant properties were also determined from ionic conductivity measurements. PMID:23978632

  17. Cationic lipid-mediated nucleic acid delivery: beyond being cationic.

    PubMed

    Rao, N Madhusudhana

    2010-03-01

    Realization of the potential of nucleic acids as drugs is intricately linked to their in vivo delivery. Cationic lipids demonstrated tremendous potential as safe, efficient and scalable in vitro carriers of nucleic acids. For in vivo delivery of nucleic acids, the extant two component liposomal preparations consisting of cationic lipids and nucleic acids have been largely found to be insufficient. Being a soft matter, liposomes readily respond to many physiological variables leading to complex component and morphological changes, thus confounding the efforts in a priori identification of a "competent" formulation. In the recent past many chemical moieties that provide advantage in facing the challenges of barriers in vivo, were incorporated into cationic lipids to improve the transfection efficiency. The cationic lipids, essential for DNA condensation and protection, definitely require additional components to be efficient in vivo. In addition, formulations of cationic lipid carriers with non-lipidic components, mainly peptides, have demonstrated success in in vivo transfection. The present review describes some recent successes of in vivo nucleic acid delivery by cationic lipids. PMID:20060819

  18. Li partitioning in the benthic foraminifera Amphistegina lessonii

    NASA Astrophysics Data System (ADS)

    Langer, Gerald; Sadekov, Aleksey; Thoms, Silke; Mewes, Antje; Nehrke, Gernot; Greaves, Mervyn; Misra, Sambuddha; Bijma, Jelle; Elderfield, Henry

    2015-12-01

    The shallow water benthic foraminifer Amphistegina lessonii was grown in seawater of variable Li and Ca concentration and shell Li/Ca was determined by means of LA-ICPMS. Shell Li/Ca is positively correlated to seawater Li/Ca only when the Li concentration of seawater is changed. If the seawater Ca concentration is changed, shell Li/Ca remains constant. This indicates that Li does not compete with Ca for incorporation in the shell of A. lessonii. A recently proposed calcification model can be applied to divalent cations (e.g., Mg and Sr), which compete for binding sites of ion transporters and positions in the calcite lattice. By contrast, the transport pathway of monovalent cations such as Li is probably diffusion based (e.g., ion-channels), and monovalent cations do not compete with Ca for a position in the calcite lattice. Here we present a new model for Li partitioning into foraminiferal calcite which predicts our experimental results and should also be applicable to other alkali metals.

  19. Charge balancing of trivalent trace elements in olivine and low-Ca pyroxene: A test using experimental partitioning data

    SciTech Connect

    Colson, R.O.; Taylor, L.A. ); McKay, G.A. )

    1989-03-01

    Charge-balancing substitution mechanisms have been determined for the incorporation of the trivalent cations Al and Sc in low-Ca pyroxene and Al, Sc, Yb, and Cr in olivine. In low-Ca pyroxene, the substitution mechanism was determined by evaluating covariations of trivalent trace cations with Si, Mg, Fe, and Ca. In olivine, substitution mechanisms were determined by comparison of the observed compositional dependence of partitioning to the compositional dependence theoretically expected for each substitution reaction. In low-Ca pyroxene, both cations investigated (Al{sub VI} and Sc{sub VI}) are charge balanced by the coupled substitution of Al for Si in tetrahedral sites. In olivine, the smaller cations (Al{sub VI} and Cr{sup +3}{sub VI}) are charge balanced in part of this same substitution (Al {leftrightarrow} Si){sub VI}. However, the larger cations (Sc{sub VI}, Yb{sub VI}) are charge balanced by a vacancy substitution: 2 (M{sup +3}){sub VI} + vacancy{sub VI} {leftrightarrow} 3 (M{sup +2}){sub VI}. The vacancy substitution is also important in charge balancing Al in olivine. These observations are important in establishing the mineral-melt reactions needed to construct the appropriate equilibrium constant for the partitioning reactions among melt, olivine, and low-Ca pyroxene. The correct equilibrium constant constrains the compositional dependence of trace element partitioning and thereby permits improved modeling of magma evolution.

  20. The Role of Electrostatics in the Partitioning Behavior of Proteins into Polymer Hydrogels

    NASA Astrophysics Data System (ADS)

    Sharma, Upma; Carbeck, Jeffrey

    2000-03-01

    The goal of this work is to quantify the role of electrostatic interactions in the partitioning behavior of proteins into polymer hydrogels using charge ladders of proteins and capillary electrophoresis. Previous attempts to study electrostatic interactions between polyelectrolytes and proteins have been performed by conducting experiments in which the pH of the system is varied. This method does alter the charge of the protein; it also affects the degree of ionization of the polyelectrolytes. The partitioning behavior will vary as a combination of these effects. Protein charge ladders offer a superior approach relative to changing solution pH as this approach allows for isolation of charge as the independent variable. Partitioning experiments conducted using neutral, anionic, and cationic gels show that partitioning behavior for proteins was independent of the molecular weight of the protein for myoglobin, a-lactalbumin, lysozyme, and bovine carbonic anhydrase. Partitioning varied with the protein charge in a way not expected from simple electrostatic arguments. For example, in gels with a low charge density, the partitioning behavior varied linearly with protein charge; in high charge density gels, the parititioning behavior was independent of the protein charge.

  1. Some trees with partition dimension three

    NASA Astrophysics Data System (ADS)

    Fredlina, Ketut Queena; Baskoro, Edy Tri

    2016-02-01

    The concept of partition dimension of a graph was introduced by Chartrand, E. Salehi and P. Zhang (1998) [2]. Let G(V, E) be a connected graph. For S ⊆ V (G) and v ∈ V (G), define the distance d(v, S) from v to S is min{d(v, x)|x ∈ S}. Let Π be an ordered partition of V (G) and Π = {S1, S2, ..., Sk }. The representation r(v|Π) of vertex v with respect to Π is (d(v, S1), d(v, S2), ..., d(v, Sk)). If the representations of all vertices are distinct, then the partition Π is called a resolving partition of G. The partition dimension of G is the minimum k such that G has a resolving partition with k partition classes. In this paper, we characterize some classes of trees with partition dimension three, namely olive trees, weeds, and centipedes.

  2. The partitioning of trace elements between clinopyroxene and trachybasaltic melt during rapid cooling and crystal growth

    NASA Astrophysics Data System (ADS)

    Mollo, S.; Blundy, J. D.; Iezzi, G.; Scarlato, P.; Langone, A.

    2013-12-01

    We present the variation in trace element partition coefficients measured at the interface between rapidly cooled clinopyroxene crystals and co-existing melts. Results indicate that, as the cooling rate is increased, clinopyroxene crystals are progressively depleted in Si, Ca and Mg counterbalanced by enrichments in Al (mainly tetrahedral Aliv), Na and Ti. Partition coefficients (Ds) for rare earth elements (REE), high field strength elements (HFSE) and transition elements (TE) increase with increasing cooling rate, in response to clinopyroxene compositional variations. The entry of REE into the M2 site is facilitated by a coupled substitution where either Na substitutes for Ca on the M2 site or Aliv substitutes for Si in the tetrahedral site. The latter substitution reflects an increased ease of locally balancing the excess charge at M2 as the number of surrounding Aliv atoms increases. Due to the lower concentration of Ca in rapidly cooled clinopyroxenes, divalent large ion lithophile elements (LILE) on M2 decrease at the expense of monovalent cations. Conversely, higher concentrations of HFSE and TE on the M1 site are facilitated as the average charge on this site increases with the replacement of divalent-charged cations by Alvi. Although crystallization kinetics modify clinopyroxene composition, deviations from equilibrium partitioning are insufficient to change the tendency of a trace element to be compatible or incompatible. Consequently, there are regular relationships between ionic radius, valence of the trace element and D. At both equilibrium and cooling rate conditions, Ds for isovalent cations define parabola-like curves when plotted against ionic radius, consistent with the lattice strain model, demonstrating that the partitioning of trace elements is driven by charge balance mechanisms; cation substitution reactions can be treated in terms of the energetics of the various charge-imbalanced configurations.

  3. Terminology for trace-element partitioning

    SciTech Connect

    Beattie, P. ); Drake, M. ); Jones, J.; McKay, G. ); Leeman, W. ); Longhi, J. ); Nielsen, R. ); Palme, H. ); Shaw, D. ); Takahashi, E. ); Watson, B. )

    1993-04-01

    A self-consistent terminology for partitioning data is presented. Ratios of the concentration of a component in two phases are termed partition coefficients and given the symbol D. Ratios of partition coefficients are termed exchange coefficients and given the symbol K[sub D]. The prefix bulk implies that these coefficients are weighted according to the proportions of coexisting phases. Bulk partition and bulk exchange coefficients are denoted by [bar D] and [ovr K[sub D

  4. First experimentally determined thermodynamic values of francium: hydration energy, energy of partitioning, and thermodynamic radius.

    PubMed

    Delmau, Lætitia H; Moine, Jérôme; Mirzadeh, Saed; Moyer, Bruce A

    2013-08-01

    The Gibbs energy of partitioning of Fr(+) ion between water and nitrobenzene has been determined to be 14.5 ± 0.6 kJ/mol at 25 °C, the first ever Gibbs energy of partitioning for francium in particular and the first ever solution thermodynamic quantity for francium in general. This value enabled the ionic radius and standard Gibbs energy of hydration for Fr(+) to be estimated as 173 pm and -251 kJ/mol, respectively, the former value being significantly smaller than previously thought. A new experimental method was established using a cesium dicarbollide as a cation-exchange agent, overcoming problems inherent to the trace-level concentrations of francium. The methodology opens the door to the study of the partitioning behavior of francium to other water-immiscible solvents and the determination of complexation constants for francium binding by receptor molecules. PMID:23848436

  5. Trace element mineral/melt partitioning for basaltic and basaltic andesitic melts: An experimental and laser ICP-MS study with application to the oxidation state of mantle source regions

    NASA Astrophysics Data System (ADS)

    Laubier, Muriel; Grove, Timothy L.; Langmuir, Charles H.

    2014-04-01

    Understanding magmatic processes such as crystallization and melting recorded in natural samples requires calibration of mineral-melt trace element partition coefficients (D) and their dependence on temperature, pressure, oxygen fugacity (fO2) and chemical composition. However, few experimental studies have focused on measuring trace element partition coefficients for a large number of trace elements, in the various minerals present in basaltic rocks, and under diverse conditions, particularly of variable fO2. Twenty-seven 0.1 MPa experiments provide partition coefficients for major elements and Sc, Ti, V, Mn, Co, Ni, Ga, Sr, Y, Nb, Ba, Ce, Nd, Eu, Gd, and Yb for the mineral phases olivine, plagioclase, orthopyroxene and clinopyroxene. The experimental conditions range from 1150 to 1190 °C with oxygen fugacities from QFM to NNO+2. Run products were analyzed by laser-ablation ICP-MS. The new partition coefficients, combined with previously published data, can be used to model crystallization processes at low pressure. Partitioning of multivalent cations V, Fe and Eu varies as a function of the redox conditions, consistent with previous work, and can be used to constrain oxidation states of magmatic source regions. The V/Yb ratio is shown to be a useful proxy for oxidation state. The V/Yb ratio varies during mantle melting as a function of oxidation state of the mantle source, and it is not modified during fractional crystallization of olivine ± plag ± cpx. V/Yb increases from MORB, BABB to arc lavas, suggesting a progressive increase of fO2 from QFM to NNO+2. Apparent fO2 of arc lavas, however, is quite variable. These results demonstrate that sub-arc mantle displays a larger range of redox conditions toward a more oxidized mantle than the MORB mantle.

  6. The Ziegler—Natta olefin insertion reaction for cationic metals

    NASA Astrophysics Data System (ADS)

    Jensen, Vidar R.; Siegban, Per E. M.

    1993-09-01

    The catalytic Ziegler—Natta polymerization reaction has been studied for a set of metal cations, in order to identify the role of the positive charge on this process. Geometry optimizations have been performed for the reactant metal—methyl systems, the π-coordinated olefin systems, the transition states for the olefin insertion and finally for the product metal—propyl systems. All valence electrons are correlated. The cations selected for this study are the transition metals Zr + and Ti +, the non-transition metals Be +, Mg +, Al + and finally also Si +. The transition metal cations are found to have very low barriers for the insertion, but the lowest barrier is actually found for Be +. The results are discussed in terms of the ionization energies and the accessibility to valence p and d orbitals. Comparisons are made to previous theoretical work on cationic model systems.

  7. New Insights on Canopy Photosynthesis from novel Isotopic Flux Partitioning in a temperate forest

    NASA Astrophysics Data System (ADS)

    Saleska, Scott; Wehr, Richard; Munger, William; Zahniser, Mark; McManus, Barry; Nelson, David

    2014-05-01

    Standard approaches for partitioning net eddy fluxes of CO2 into gross primary production (GPP) and ecosystem respiration (R) typically work by extrapolating R from night to day using an empirical function fit to a week or a month of data. Such methods assume that daytime R behaves like nighttime R, and is either constant or a smoothly varying function of temperature. Isotopic partitioning is an alternative that involves no assumptions about the behavior of R or GPP (though it requires knowledge or assumptions about the isotopic fractionations occurring in and around the leaves) and which allows for the investigation of diel variations because each flux measurement is partitioned separately. A novel isotopic flux partitioning approach using the first long-term isotopic CO2 eddy flux record (measured at Harvard Forest) reveals differences in both the diel and the seasonally averaged behavior of GPP as compared to conventional partitioning. At the diel timescale, large (~10 umol m-2 s-1), rapid (~2 hours) variations in the respiratory component of measured NEE associated with subtle changes in wind direction are misattributed to GPP by conventional partitioning, leading to inconsistency in the response of GPP to photosynthetically active radiation (PAR). Isotopically partitioned GPP responds more consistently to PAR, and the seasonally averaged light response curve of isotopically partitioned GPP is more linear than that of conventionally partitioned GPP, suggesting that unsaturated (steeply inclined) leaves perform most of the canopy photosynthesis. Isotopic partitioning further suggests that conventional partitioning based on the temperature-dependent extrapolation of nighttime R overestimates GPP by 10-20%, on average, consistent with its neglect of the suppression of foliar dark respiration by sunlight. Isotopic partitioning is thus changing our interpretation of ecosystem CO2 exchange at the Harvard Forest.

  8. Regulation of Cation Balance in Saccharomyces cerevisiae

    PubMed Central

    Cyert, Martha S.; Philpott, Caroline C.

    2013-01-01

    All living organisms require nutrient minerals for growth and have developed mechanisms to acquire, utilize, and store nutrient minerals effectively. In the aqueous cellular environment, these elements exist as charged ions that, together with protons and hydroxide ions, facilitate biochemical reactions and establish the electrochemical gradients across membranes that drive cellular processes such as transport and ATP synthesis. Metal ions serve as essential enzyme cofactors and perform both structural and signaling roles within cells. However, because these ions can also be toxic, cells have developed sophisticated homeostatic mechanisms to regulate their levels and avoid toxicity. Studies in Saccharomyces cerevisiae have characterized many of the gene products and processes responsible for acquiring, utilizing, storing, and regulating levels of these ions. Findings in this model organism have often allowed the corresponding machinery in humans to be identified and have provided insights into diseases that result from defects in ion homeostasis. This review summarizes our current understanding of how cation balance is achieved and modulated in baker’s yeast. Control of intracellular pH is discussed, as well as uptake, storage, and efflux mechanisms for the alkali metal cations, Na+ and K+, the divalent cations, Ca2+ and Mg2+, and the trace metal ions, Fe2+, Zn2+, Cu2+, and Mn2+. Signal transduction pathways that are regulated by pH and Ca2+ are reviewed, as well as the mechanisms that allow cells to maintain appropriate intracellular cation concentrations when challenged by extreme conditions, i.e., either limited availability or toxic levels in the environment. PMID:23463800

  9. Cation Diffusion in Xenotime

    NASA Astrophysics Data System (ADS)

    Cherniak, D. J.

    2004-05-01

    Xenotime is an important mineral in metamorphic paragenesis, and useful in isotopic dating, garnet-xenotime thermometry, and monazite-xenotime thermometry, so diffusion data for xenotime of cations of geochronological and geochemical importance are of some interest. We report here on diffusion of the rare earth elements Sm, Dy and Yb in synthetic xenotime under dry conditions. The synthetic xenotime was grown via a Na2}CO{3}-MoO_{3 flux method. The source of diffusant for the experiments were REE phosphate powders, with experiments run with sources containing a single REE. Experiments were performed by placing source and xenotime in Pt capsules, and annealing capsules in 1 atm furnaces for times ranging from thirty minutes to a month, at temperatures from 1000 to 1400C. The REE distributions in the xenotime were profiled by Rutherford Backscattering Spectrometry (RBS). The following Arrhenius relations are obtained for diffusion in xenotime, normal to (101): DSm = 1.7x10-4 exp(-442 kJ mol-1/RT) m2}sec{-1 DDy = 3.5x10-7 exp(-365 kJ mol-1/RT) m2}sec{-1 DYb = 7.4x10-7 exp(-371 kJ mol-1/RT) m2}sec{-1. Diffusivities of these REE do not differ greatly in xenotime, in contrast to the findings noted for the REE in zircon (Cherniak et al., 1997), where the LREE diffuse more slowly, and with higher activation energies for diffusion, than the heavier rare earths. In zircon, these differences among diffusion of the rare earths are attributed to the relatively large size of the REE with respect to Zr, for which they substitute in the zircon lattice. With the systematic increase in ionic radius from the heavy to lighter REE, this size mismatch becomes more pronounced and diffusivities of the LREE are as consequence slower. Although xenotime is isostructural with zircon, the REE are more closely matched in size to Y, so in xenotime this effect appears much smaller and the REE diffuse at similar rates. In addition, the process of diffusion in xenotime likely involves simple REE+3

  10. Cationic bituminous emulsions and emulsion aggregate slurries

    SciTech Connect

    Schilling, P.

    1986-07-01

    A cationic bituminous emulsion is described which consists of from about 30% to about 80% by weight of bitumen, from about 0.1% to about 10% by weight of an emulsifier selected from the group consisting of reaction products of a polyamine reacted with a member of the group consisting of epoxidized unsaturated fatty acids of chain lengths between C/sub 8/ and C/sub 22/ and the esters thereof and adding water to make up 100% by weight, the emulsion having a pH in the range of from 2-7.

  11. Cation Ordering in Layered Nickelates

    NASA Astrophysics Data System (ADS)

    Nelson-Cheeseman, Brittany; Zhou, Hua; Cammarata, Antonio; Hoffman, Jason; Balachandran, Prasanna; Rondinelli, James; Bhattacharya, Anand

    2013-03-01

    The single layer Ruddlesden-Popper nickelates present a model system to understand how the effects of digital dopant cation ordering may affect the properties of 2-dimensional conducting sheets. We investigate the effects of aliovalent A-site cation order on LaSrNiO4 films. Using molecular beam epitaxy, we interleave full layers of SrO and LaO in a series of chemically equivalent films, varying the pattern of SrO and LaO layers relative to the NiO2 layers. Through synchrotron surface x-ray diffraction and Coherant Bragg Rod Analysis (COBRA), we directly investigate the A-site cation order and the resulting atomic displacements for each ordering pattern. We correlate these results with theoretical calculations and transport measurements of the layered nickelate films.

  12. Recovery and partitioning of nitrogen from early spring and midsummer applications to pecan trees

    Technology Transfer Automated Retrieval System (TEKTRAN)

    Effective nitrogen (N) management promotes consistent and abundant pecan [Carya illinoinensis (Wangenh.) C. Koch] production while minimizing waste. Recovery and partitioning characteristics of N potentially affects N management decisions; for this reason, we report certain N characteristics exhibi...

  13. Marginal Consistency: Upper-Bounding Partition Functions over Commutative Semirings.

    PubMed

    Werner, Tomás

    2015-07-01

    Many inference tasks in pattern recognition and artificial intelligence lead to partition functions in which addition and multiplication are abstract binary operations forming a commutative semiring. By generalizing max-sum diffusion (one of convergent message passing algorithms for approximate MAP inference in graphical models), we propose an iterative algorithm to upper bound such partition functions over commutative semirings. The iteration of the algorithm is remarkably simple: change any two factors of the partition function such that their product remains the same and their overlapping marginals become equal. In many commutative semirings, repeating this iteration for different pairs of factors converges to a fixed point when the overlapping marginals of every pair of factors coincide. We call this state marginal consistency. During that, an upper bound on the partition function monotonically decreases. This abstract algorithm unifies several existing algorithms, including max-sum diffusion and basic constraint propagation (or local consistency) algorithms in constraint programming. We further construct a hierarchy of marginal consistencies of increasingly higher levels and show than any such level can be enforced by adding identity factors of higher arity (order). Finally, we discuss instances of the framework for several semirings, including the distributive lattice and the max-sum and sum-product semirings. PMID:26352452

  14. Fluid/Melt Partition Coefficients Of Halogens In Basaltic Melt

    NASA Astrophysics Data System (ADS)

    Alletti, M.; Baker, D.; Scaillet, B.; Aiuppa, A.; Moretti, R.; Ottolini, L.

    2007-12-01

    Despite the importance of halogens (F, Cl) in volcanic degassing, solubility and fluid/melt partitioning of these elements have not been comprehensively studied in natural basaltic melts. Experimental determinations of halogen solubility in Mount Etna melts are lacking, despite this volcano being one of the most active and intensively monitored on Earth with an estimated output of thousands tonnes of halogens per day. In order to better understand halogen degassing, we present the results of a series of halogen partitioning experiments performed at different pressures (1-200 MPa), redox conditions (from Δ NNO = + 2 to Δ NNO = - 0.3) and fluid compositions. Experiments used a hawaiitic, glassy, alkaline basalt with Mg# = 0.59, sampled during the July 2001 eruption of Mount Etna. A series of experiments were conducted using H2O-NaCl or H2O-NaF solutions. The effect of CO2 in multi-component fluid H2O-CO2-NaCl or H2O-CO2-NaF was also investigated. The experimental run products were mostly glasses, but a few run products contained less than 10% crystals. The concentration of halogens in the fluid phase after the experiment was calculated from mass balance, and the partition coefficients for both Cl and F at the studied conditions determined. Using these measurements and thermodynamical models, the dependence of these partition coefficients on the fugacities of various gaseous species was investigated.

  15. Advanced Aqueous Separation Systems for Actinide Partitioning

    SciTech Connect

    Nash, Kenneth L.; Clark, Sue; Meier, G Patrick; Alexandratos, Spiro; Paine, Robert; Hancock, Robert; Ensor, Dale

    2012-03-21

    One of the most challenging aspects of advanced processing of spent nuclear fuel is the need to isolate transuranium elements from fission product lanthanides. This project expanded the scope of earlier investigations of americium (Am) partitioning from the lanthanides with the synthesis of new separations materials and a centralized focus on radiochemical characterization of the separation systems that could be developed based on these new materials. The primary objective of this program was to explore alternative materials for actinide separations and to link the design of new reagents for actinide separations to characterizations based on actinide chemistry. In the predominant trivalent oxidation state, the chemistry of lanthanides overlaps substantially with that of the trivalent actinides and their mutual separation is quite challenging.

  16. Partition Coefficients at High Pressure and Temperature

    NASA Astrophysics Data System (ADS)

    Righter, K.; Drake, M. J.

    2003-12-01

    crystallize from a molten mantle, and become entrained in the convecting melt, or eventually settle out at the bottom. The entrainment and settling process has been studied in detail (e.g., Tonks and Melosh, 1990), and is a potential mechanism for differentiation between the deep and shallow parts of Earth's mantle. The lithophile elements, those elements that have D(metal/silicate) <1, fall into many different subclasses and all hold information about the deep mineral structure of the mantle. Rare-earth elements (REEs) have proven to be useful: europium anomalies have helped elucidate the role of plagioclase in lunar crust formation (e.g., Schnetzler and Philpotts, 1971; Weill et al., 1974), and LREE/HREE depletion and enrichment are indicators of partial melting in the presence of garnet in the mantle. High-field-strength elements (HFSEs) - niobium, zirconium, tantalum, and hafnium - are all refractory and hence more resilient to fractionation processes such as volatility or condensation. They also have an affinity for ilmenite and rutile, and can explain differences between lunar and martian samples as well as features of Earth's continental crust ( Taylor and McLennan, 1985). Alkaline-earth and alkaline elements include rubidium, strontium, barium, potassium, caesium, and calcium, some of which are involved in radioactive decay couples, e.g., Rb-Sr and K-Ar. The latter is important in understanding the contribution of radioactive decay to planetary heat production, and potential deep sources of radiogenic argon (see Chapter 2.06). Rubidium and potassium are further useful as tracers of hydrous phases such as mica and amphibole. Possible fractionation of any of these elements from chondritic abundances (see Chapter 2.01) can be assessed with the knowledge of partition coefficients. In this chapter we summarize our understanding of mineral/melt fractionation of minor and trace elements at high pressures and temperatures and discuss the implications for mantle

  17. Influence of cations on noncovalent interactions between 6-propionyl-2-dimethylaminonaphthalene (PRODAN) and dissolved fulvic and humic acids.

    PubMed

    Gadad, Praveen; Nanny, Mark A

    2008-12-01

    The influence of cations (Na(+), Ca(2+) and Mg(2+)) on noncovalent interactions between 6-propionyl-2-dimethylaminonaphthalene (PRODAN) and dissolved fulvic acids (FAs) (Norman landfill leachate fulvic acid (NLFA) and Suwannee River fulvic acid (SRFA)) and dissolved humic acids (HAs) (Suwannee River humic acid (SRHA) and Leonardite humic acid (LHA)) was examined using steady-state fluorescence spectroscopy at pH 4, 7 and 10 as a function of cation concentration (up to 25-100mM). Regardless of pH and cation concentration, PRODAN quenching by FA was unaffected by cations. However, interactions between PRODAN and HA decreased in the presence of cations at pH 7 and 10. Cation concentrations below the HA charge density resulted in the greatest decrease of PRODAN quenching, while very little additional decrease in PRODAN quenching occurred at cation concentrations above the HA charge density. This suggests that as the HA carboxylic acid functional groups form inner sphere complexes with divalent cations, intramolecular interactions result in a contraction of the HA molecular structure, thereby preventing PRODAN from associating with the condensed aromatic, electron accepting moieties inherent within HA molecules and responsible for PRODAN quenching. However, once the HA carboxylic acid functional groups are fully titrated with divalent cations, PRODAN quenching is no longer significantly influenced by the further addition of cations, even though these additional cations facilitate intermolecular interactions between the HA molecules to form supramolecular HA aggregates that can continue to increase in size. Regardless of FA and HA type, pH, cation type and concentration, the lack of blue-shifted fluorescence emission spectra indicated that micelle-like hydrophobic regions, amenable to PRODAN partitioning, were not formed by intra- and intermolecular interactions of FA and HA. PMID:18849058

  18. About Thinning Invariant Partition Structures

    NASA Astrophysics Data System (ADS)

    Starr, Shannon; Vermesi, Brigitta; Wei, Ang

    2012-08-01

    Bernoulli- p thinning has been well-studied for point processes. Here we consider three other cases: (1) sequences ( X 1, X 2,…); (2) gaps of such sequences ( X n+1- X 1) n∈ℕ; (3) partition structures. For the first case we characterize the distributions which are simultaneously invariant under Bernoulli- p thinning for all p∈(0,1]. Based on this, we make conjectures for the latter two cases, and provide a potential approach for proof. We explain the relation to spin glasses, which is complementary to important previous work of Aizenman and Ruzmaikina, Arguin, and Shkolnikov.

  19. Cation Uptake and Allocation by Red Pine Seedlings under Cation-Nutrient Stress in a Column Growth Experiment

    SciTech Connect

    Shi, Zhenqing; Balogh-Brunstad, Zsuzsanna; Grant, Michael R.; Harsh, James B.; Gill, Richard; Thomashow, Linda; Dohnalkova, Alice; Stacks, Daryl; Letourneau, Melissa; Keller, Chester K.

    2014-01-10

    Background and Aims Plant nutrient uptake is affected by environmental stress, but how plants respond to cation-nutrient stress is poorly understood. We assessed the impact of varying degrees of cation-nutrient limitation on cation uptake in an experimental plant-mineral system. Methods Column experiments, with red pine (Pinus resinosa Ait.) seedlings growing in sand/mineral mixtures, were conducted for up to nine months under a range of Ca- and K-limited conditions. The Ca and K were supplied from both minerals and nutrient solutions with varying Ca and K concentrations. Results Cation nutrient stress had little impact on carbon allocation after nine months of plant growth and K was the limiting nutrient for biomass production. The Ca/Sr and K/Rb ratio results allowed independent estimation of dissolution incongruency and discrimination against Sr and Rb during cation uptake processes. The fraction of K in biomass from biotite increased with decreasing K supply from nutrient solutions. The mineral anorthite was consistently the major source of Ca, regardless of nutrient treatment. Conclusions Red pine seedlings exploited more mineral K in response to more severe K deficiency. This did not occur for Ca. Plant discrimination factors must be carefully considered to accurately identify nutrient sources using cation tracers.

  20. Membrane potential and surface potential in mitochondria: uptake and binding of lipophilic cations.

    PubMed

    Rottenberg, H

    1984-01-01

    The uptake and binding of the lipophilic cations ethidium+, tetraphenylphosphonium+ (TPP+), triphenylmethylphosphonium+ (TPMP+), and tetraphenylarsonium+ (TPA+) in rat liver mitochondria and submitochondrial particles were investigated. The effects of membrane potential, surface potentials and cation concentration on the uptake and binding were elucidated. The accumulation of these cations by mitochondria is described by an uptake and binding to the matrix face of the inner membrane in addition to the binding to the cytosolic face of the inner membrane. The apparent partition coefficients between the external medium and the cytosolic surface of the inner membrane (K'o) and the internal matrix volume and matrix face of the inner membrane (K'i) were determined and were utilized to estimate the membrane potential delta psi from the cation accumulation factor Rc according to the relation delta psi = RT/ZF ln [(RcVo - K'o)/(Vi + K'i)] where Vo and Vi are the volume of the external medium and the mitochondrial matrix, respectively, and Rc is the ratio of the cation content of the mitochondria and the medium. The values of delta psi estimated from this equation are in remarkably good agreement with those estimated from the distribution of 86Rb in the presence of valinomycin. The results are discussed in relation to studies in which the membrane potential in mitochondria and bacterial cells was estimated from the distribution of lipophilic cations. PMID:6492133

  1. On some trees having partition dimension four

    NASA Astrophysics Data System (ADS)

    Ida Bagus Kade Puja Arimbawa, K.; Baskoro, Edy Tri

    2016-02-01

    In 1998, G. Chartrand, E. Salehi and P. Zhang introduced the notion of partition dimension of a graph. Since then, the study of this graph parameter has received much attention. A number of results have been obtained to know the values of partition dimensions of various classes of graphs. However, for some particular classes of graphs, finding of their partition dimensions is still not completely solved, for instances a class of general tree. In this paper, we study the properties of trees having partition dimension 4. In particular, we show that, for olive trees O(n), its partition dimension is equal to 4 if and only if 8 ≤ n ≤ 17. We also characterize all centipede trees having partition dimension 4.

  2. Cation-cation interactions and cation exchange in a series of isostructural framework uranyl tungstates

    NASA Astrophysics Data System (ADS)

    Balboni, Enrica; Burns, Peter C.

    2014-05-01

    The isotypical compounds (UO2)3(WO6)(H2O)5 (1), Ag(UO2)3(WO6)(OH)(H2O)3 (2), K(UO2)3(WO6)OH(H2O)4 (3), Rb(UO2)3(WO6)(OH)(H2O)3.5 (4), and Cs(UO2)3(WO6)OH(H2O)3 (5) were synthesized, characterized, and their structures determined. Each crystallizes in space group Cc. (1): a=12.979 (3), b=10.238 (2), c=11.302 (2), β=102.044 (2); (2): a=13.148 (2), b=9.520 (1), c=11.083 (2), β=101.568 (2); (3): a=13.111 (8), b=9.930 (6), c=11.242 (7), β=101.024 (7); (4): a=12.940 (2), b=10.231 (2), c=11.259(2), β=102.205 (2); (5): a=12.983 (3), b=10.191 (3), c=11.263 (4), β=101.661 (4). Compounds 1-5 are a framework of uranyl and tungsten polyhedra containing cation-cation interactions. The framework has three symmetrically distinct U(VI) cations, one tungsten, sixteen to eighteen oxygen atoms, and in 2-5, one monovalent cation. Each atom occupies a general position. Each U(VI) cation is present as a typical (UO2)2+ uranyl ion in an overall pentagonal bipyramidal coordination environment. Each pentagonal bipyramid shares two equatorial edges with two other pentagonal bipyramids, forming a trimer. Trimers are connected into chains by edge-sharing with WO6 octahedra. Chains are linked through cation-cation interactions between two symmetrically independent uranyl ions. This yields a remarkably complex system of intersecting channels that extend along [0 0 1] and [-1 1 0]. The cation exchange properties of 2 and 3 were characterized at room temperature and at 140 °C.

  3. Starch synthesis and carbon partitioning in developing endosperm.

    PubMed

    Emes, M J; Bowsher, C G; Hedley, C; Burrell, M M; Scrase-Field, E S F; Tetlow, I J

    2003-01-01

    The biosynthesis of starch is the major determinant of yield in cereal grains. In this short review, attention is focused on the synthesis of the soluble substrate for starch synthesis, ADPglucose (ADPG). Consideration is given to the pathway of ADPG production, its subcellular compartmentation, and the role of metabolite transporters in mediating its delivery to the site of starch synthesis. As ADPG is an activated sugar, the dependence of its production on respiration, changes which occur during development, and the constraints which ATP production may place on carbon partitioning into different end-products are discussed. PMID:12508067

  4. Chemical amplification based on fluid partitioning in an immiscible liquid

    DOEpatents

    Anderson, Brian L.; Colston, Bill W.; Elkin, Christopher J.

    2010-09-28

    A system for nucleic acid amplification of a sample comprises partitioning the sample into partitioned sections and performing PCR on the partitioned sections of the sample. Another embodiment of the invention provides a system for nucleic acid amplification and detection of a sample comprising partitioning the sample into partitioned sections, performing PCR on the partitioned sections of the sample, and detecting and analyzing the partitioned sections of the sample.

  5. Displaying multimedia environmental partitioning by triangular diagrams

    SciTech Connect

    Lee, S.C.; Mackay, D.

    1995-11-01

    It is suggested that equilateral triangular diagrams are a useful method of depicting the equilibrium partitioning of organic chemicals among the three primary environmental media of the atmosphere, the hydrosphere, and the organosphere (natural organic matter and biotic lipids and waxes). The technique is useful for grouping chemicals into classes according to their partitioning tendencies, for depicting the incremental effects of substituents such as alkyl groups and chlorine, and for showing how partitioning changes in response to changes in temperature.

  6. Cylindric partitions, {{\\boldsymbol{ W }}}_{r} characters and the Andrews-Gordon-Bressoud identities

    NASA Astrophysics Data System (ADS)

    Foda, O.; Welsh, T. A.

    2016-04-01

    We study the Andrews-Gordon-Bressoud (AGB) generalisations of the Rogers-Ramanujan q-series identities in the context of cylindric partitions. We recall the definition of r-cylindric partitions, and provide a simple proof of Borodin’s product expression for their generating functions, that can be regarded as a limiting case of an unpublished proof by Krattenthaler. We also recall the relationships between the r-cylindric partition generating functions, the principal characters of {\\hat{{sl}}}r algebras, the {{\\boldsymbol{ M }}}r r,r+d minimal model characters of {{\\boldsymbol{ W }}}r algebras, and the r-string abaci generating functions, providing simple proofs for each. We then set r = 2, and use two-cylindric partitions to re-derive the AGB identities as follows. Firstly, we use Borodin’s product expression for the generating functions of the two-cylindric partitions with infinitely long parts, to obtain the product sides of the AGB identities, times a factor {(q;q)}∞ -1, which is the generating function of ordinary partitions. Next, we obtain a bijection from the two-cylindric partitions, via two-string abaci, into decorated versions of Bressoud’s restricted lattice paths. Extending Bressoud’s method of transforming between restricted paths that obey different restrictions, we obtain sum expressions with manifestly non-negative coefficients for the generating functions of the two-cylindric partitions which contains a factor {(q;q)}∞ -1. Equating the product and sum expressions of the same two-cylindric partitions, and canceling a factor of {(q;q)}∞ -1 on each side, we obtain the AGB identities.

  7. Parameters of photosynthetic energy partitioning.

    PubMed

    Lazár, Dušan

    2015-03-01

    Almost every laboratory dealing with plant physiology, photosynthesis research, remote sensing, and plant phenotyping possesses a fluorometer to measure a kind of chlorophyll (Chl) fluorescence induction (FLI). When the slow Chl FLI is measured with addition of saturating pulses and far-red illumination, the so-called quenching analysis followed by the so-called relaxation analysis in darkness can be realized. These measurements then serve for evaluation of the so-called energy partitioning, that is, calculation of quantum yields of photochemical and of different types of non-photochemical processes. Several theories have been suggested for photosynthetic energy partitioning. The current work aims to summarize all the existing theories, namely their equations for the quantum yields, their meaning and their assumptions. In the framework of these theories it is also found here that the well-known NPQ parameter ( [Formula: see text] ; Bilger and Björkman, 1990) equals the ratio of the quantum yield of regulatory light-induced non-photochemical quenching to the quantum yield of constitutive non-regulatory non-photochemical quenching (ΦNPQ/Φf,D). A similar relationship is also found here for the PQ parameter (ΦP/Φf,D). PMID:25569797

  8. Metal/Silicate Partitioning at High Pressures and Temperatures

    NASA Technical Reports Server (NTRS)

    Shofner, G.; Campbell, A.; Danielson, L.; Righter, K.; Rahman, Z.

    2010-01-01

    The behavior of siderophile elements during metal-silicate segregation, and their resulting distributions provide insight into core formation processes. Determination of partition coefficients allows the calculation of element distributions that can be compared to established values of element abundances in the silicate (mantle) and metallic (core) portions of the Earth. Moderately siderophile elements, including W, are particularly useful in constraining core formation conditions because they are sensitive to variations in T, P, oxygen fugacity (fO2), and silicate composition. To constrain the effect of pressure on W metal/silicate partitioning, we performed experiments at high pressures and temperatures using a multi anvil press (MAP) at NASA Johnson Space Center and laser-heated diamond anvil cells (LHDAC) at the University of Maryland. Starting materials consisted of natural peridotite mixed with Fe and W metals. Pressure conditions in the MAP experiments ranged from 10 to 16 GPa at 2400 K. Pressures in the LHDAC experiments ranged from 26 to 58 GPa, and peak temperatures ranged up to 5000 K. LHDAC experimental run products were sectioned by focused ion beam (FIB) at NASA JSC. Run products were analyzed by electron microprobe using wavelength dispersive spectroscopy. Liquid metal/liquid silicate partition coefficients for W were calculated from element abundances determined by microprobe analyses, and corrected to a common fO2 condition of IW-2 assuming +4 valence for W. Within analytical uncertainties, W partitioning shows a flat trend with increasing pressure from 10 to 16 GPa. At higher pressures, W becomes more siderophile, with an increase in partition coefficient of approximately 0.5 log units.

  9. Mass partitioning effects in diffusion transport.

    PubMed

    Kojic, Milos; Milosevic, Miljan; Wu, Suhong; Blanco, Elvin; Ferrari, Mauro; Ziemys, Arturas

    2015-08-28

    Frequent mass exchange takes place in a heterogeneous environment among several phases, where mass partitioning may occur at the interface of phases. Analytical and computational methods for diffusion do not usually incorporate molecule partitioning masking the true picture of mass transport. Here we present a computational finite element methodology to calculate diffusion mass transport with a partitioning phenomenon included and the analysis of the effects of partitioning. Our numerical results showed that partitioning controls equilibrated mass distribution as expected from analytical solutions. The experimental validation of mass release from drug-loaded nanoparticles showed that partitioning might even dominate in some cases with respect to diffusion itself. The analysis of diffusion kinetics in the parameter space of partitioning and diffusivity showed that partitioning is an extremely important parameter in systems, where mass diffusivity is fast and that the concentration of nanoparticles can control payload retention inside nanoparticles. The computational and experimental results suggest that partitioning and physiochemical properties of phases play an important, if not crucial, role in diffusion transport and should be included in the studies of mass transport processes. PMID:26204522

  10. Electrospray Ionization Tandem Mass Spectrometry of Ammonium Cationized Polyethers

    NASA Astrophysics Data System (ADS)

    Nasioudis, Andreas; Heeren, Ron M. A.; van Doormalen, Irene; de Wijs-Rot, Nicolette; van den Brink, Oscar F.

    2011-05-01

    Quaternary ammonium salts (Quats) and amines are known to facilitate the MS analysis of high molar mass polyethers by forming low charge state adduct ions. The formation, stability, and behavior upon collision-induced dissociation (CID) of adduct ions of polyethers with a variety of Quats and amines were studied by electrospray ionization quadrupole time-of-flight, quadrupole ion trap, and linear ion trap tandem mass spectrometry (MS/MS). The linear ion trap instrument was part of an Orbitrap hybrid mass spectrometer that allowed accurate mass MS/MS measurements. The Quats and amines studied were of different degree of substitution, structure, and size. The stability of the adduct ions was related to the structure of the cation, especially the amine's degree of substitution. CID of singly/doubly charged primary and tertiary ammonium cationized polymers resulted in the neutral loss of the amine followed by fragmentation of the protonated product ions. The latter reveals information about the monomer unit, polymer sequence, and endgroup structure. In addition, the detection of product ions retaining the ammonium ion was observed. The predominant process in the CID of singly charged quaternary ammonium cationized polymers was cation detachment, whereas their doubly charged adduct ions provided the same information as the primary and tertiary ammonium cationized adduct ions. This study shows the potential of specific amines as tools for the structural elucidation of high molar mass polyethers.

  11. Fluorine Partitioning between Nominally Anhydrous Minerals (cpx, ol, plag) and Silicate Melt

    NASA Astrophysics Data System (ADS)

    Guggino, S. N.; Hervig, R. L.

    2012-12-01

    Fluorine is a volatile constituent of magmas and hydrous mantle minerals, and the similar ionic radius of F- (1.33 Å) to that of OH- and O2- (1.40 Å) allows F- to substitute for OH- in hydrous phases and for oxygen in nominally anhydrous phases. Recent studies by Hervig and Bell (2005 Fall AGU), Guggino et al. (2007, 2009 Fall AGU), and Dalou et al. (2011) demonstrate that trace F, like H, is incorporated into nominally anhydrous minerals (NAMs) such as olivine (oliv), clinopyroxene (cpx), and plagioclase (plag), and the lower diffusivity of F compared to H in these phases renders F less subject to disturbance. Determining the behavior and controls of F incorporation into NAMs may provide a means to estimate the pre-eruptive F contents of degassed magmas and, by comparison, to better understand degassing behavior of H. In this study, we investigated the partitioning behavior of F in cpx, olivine, and plagioclase and examined the crystal-chemical controls and melt structural controls on F partitioning into olivine and cpx. Fluorine abundances were measured on phases (cpx, ol, plag, glass) from pre-existing experimental run products comprising olivine-minette (Esperanca and Holloway 1987), augite-minette (Righter and Carmichael 1996), basaltic andesite (Moore and Carmichael 1998) and latite (Esperanca and Holloway 1986) compositions. Fluorine ion intensities in the crystals and glass were measured by secondary ion mass spectrometry (SIMS) using a primary beam of 16O- ions and detection of negative secondary ions. Interfering 18OH- was separated from 19F- using high mass resolution. DFmin/melt varied with each melt composition and showed a progressive increase with increasing silica content of the melt such that oliv-minette < aug-minette < basaltic andesite < latite. For DFcpx/melt: oliv-minette (0.04-0.10); aug-minette (0.11-0.17); basaltic andesite (0.17-0.21); latite (0.12-0.27). For DFoliv/melt: oliv-minette (0.01-0.07); basaltic andesite (0.13-0.16). For

  12. Efficient partitioning and assignment on programs for multiprocessor execution

    NASA Technical Reports Server (NTRS)

    Standley, Hilda M.

    1993-01-01

    The general problem studied is that of segmenting or partitioning programs for distribution across a multiprocessor system. Efficient partitioning and the assignment of program elements are of great importance since the time consumed in this overhead activity may easily dominate the computation, effectively eliminating any gains made by the use of the parallelism. In this study, the partitioning of sequentially structured programs (written in FORTRAN) is evaluated. Heuristics, developed for similar applications are examined. Finally, a model for queueing networks with finite queues is developed which may be used to analyze multiprocessor system architectures with a shared memory approach to the problem of partitioning. The properties of sequentially written programs form obstacles to large scale (at the procedure or subroutine level) parallelization. Data dependencies of even the minutest nature, reflecting the sequential development of the program, severely limit parallelism. The design of heuristic algorithms is tied to the experience gained in the parallel splitting. Parallelism obtained through the physical separation of data has seen some success, especially at the data element level. Data parallelism on a grander scale requires models that accurately reflect the effects of blocking caused by finite queues. A model for the approximation of the performance of finite queueing networks is developed. This model makes use of the decomposition approach combined with the efficiency of product form solutions.

  13. Methodology for optimally sized centrifugal partition chromatography columns.

    PubMed

    Chollet, Sébastien; Marchal, Luc; Jérémy Meucci; Renault, Jean-Hugues; Legrand, Jack; Foucault, Alain

    2015-04-01

    Centrifugal Partition Chromatography (CPC) is a separation process based on the partitioning of solutes between two partially miscible liquid phases. There is no solid support for the stationary phase. The centrifugal acceleration is responsible for both stationary phase retention and mobile phase dispersion. CPC is thus a process based on liquid-liquid mass transfer. The separation efficiency is mainly influenced by the hydrodynamics of the phases in each cell of the column. Thanks to a visualization system, called "Visual CPC", it was observed that the mobile phase can flow through the stationary phase as a sheet, or a spray. Hydrodynamics, which directly governs the instrument efficiency, is directly affected during scale changes, and non-linear phenomena prevent the successful achievement of mastered geometrical scale changes. In this work, a methodology for CPC column sizing is proposed, based on the characterization of the efficiency of advanced cell shapes, taking into account the hydrodynamics. Knowledge about relationship between stationary phase volume, cell efficiency and separation resolution in CPC allowed calculating the optimum cell number for laboratory and industrial scale CPC application. The methodology is highlighted with results on five different geometries from 25 to 5000 mL, for two applications: the separation of alkylbenzene by partitioning with heptane/methanol/water biphasic system; and the separation of peptides by partitioning with n-butanol/acetic acid/water (4/1/5) biphasic system. With this approach, it is possible to predict the optimal CPC column length leading to highest productivity. PMID:25744547

  14. Radionuclide Partitioning in an Underground Nuclear Test Cavity

    SciTech Connect

    Rose, T P; Hu, Q; Zhao, P; Conrado, C L; Dickerson, R; Eaton, G F; Kersting, A B; Moran, J E; Nimz, G; Powell, B A; Ramon, E C; Ryerson, F J; Williams, R W; Wooddy, P T; Zavarin, M

    2009-01-09

    In 2004, a borehole was drilled into the 1983 Chancellor underground nuclear test cavity to investigate the distribution of radionuclides within the cavity. Sidewall core samples were collected from a range of depths within the re-entry hole and two sidetrack holes. Upon completion of drilling, casing was installed and a submersible pump was used to collect groundwater samples. Test debris and groundwater samples were analyzed for a variety of radionuclides including the fission products {sup 99}Tc, {sup 125}Sb, {sup 129}I, {sup 137}Cs, and {sup 155}Eu, the activation products {sup 60}Co, {sup 152}Eu, and {sup 154}Eu, and the actinides U, Pu, and Am. In addition, the physical and bulk chemical properties of the test debris were characterized using Scanning Electron Microscopy (SEM) and Electron Microprobe measurements. Analytical results were used to evaluate the partitioning of radionuclides between the melt glass, rubble, and groundwater phases in the Chancellor test cavity. Three comparative approaches were used to calculate partitioning values, though each method could not be applied to every nuclide. These approaches are based on: (1) the average Area 19 inventory from Bowen et al. (2001); (2) melt glass, rubble, and groundwater mass estimates from Zhao et al. (2008); and (3) fission product mass yield data from England and Rider (1994). The U and Pu analyses of the test debris are classified and partitioning estimates for these elements were calculated directly from the classified Miller et al. (2002) inventory for the Chancellor test. The partitioning results from this study were compared to partitioning data that were previously published by the IAEA (1998). Predictions of radionuclide distributions from the two studies are in agreement for a majority of the nuclides under consideration. Substantial differences were noted in the partitioning values for {sup 99}Tc, {sup 125}Sb, {sup 129}I, and uranium. These differences are attributable to two factors

  15. Halogenated silanes, radicals, and cations

    NASA Astrophysics Data System (ADS)

    Wang, Liming; He, Yi-Liang

    2008-09-01

    Quantum chemistry study has been carried out on the structure and energetics of halogenated silanes, radicals, and cations (SiHxXy0,+1, X = F, Cl, Br; x + y = 1-4). The geometries are optimized at B3LYP/6-31+G(2df,p) level. The adiabatic ionization energiess (IEas), relative energetics of cations, proton affinities (PAs) of silanes, and the enthalpies of formation are predicted using G3(CC) model chemistry. Non-classical ion complex structures are found for hydrogenated cations and transition states connecting classical and non-classical structures are also located. The most stable cations for silylene and silyl radicals have their classical divalent and trivalent structures, and those for silanes have non-classical structures except for SiH3Br+ and SiH2Br2+. The non-classical structures for halosilane cations imply difficulty in experimentally measurement of the adiabatic ionization energies using photoionization or photoelectron studies. For SiH3X, SiH2X2, and SiHX3, the G3(CC) adiabatic IEas to classical ionic structures closest to their neutrals agree better with the photoelectron spectroscopic measurements. The transition states between classical and non-classical structures also hamper the photoionization determination of the appearance energies for silylene cations from silanes. The G3(CC) results for SiHx0,+1 agree excellently with the photoionization mass spectrometric study, and the results for fluorinated and chlorinated species also agree with the previous theoretical predictions at correlation levels from BAC-MP4 to CCSD(T)/CBS. The predicted enthalpy differences between SiH2Cl+, SiHCl2+, and SiCl3+ are also in accordance with previous kinetics study. The G3(CC) results show large discrepancies to the collision-induced charge transfer and/or dissociation reactions involving SiFx+ and SiClx+ ions, for which the G3(CC) enthalpies of formation are also significantly differed from the previous theoretical predictions, especially on SiFx+ (x = 2-4). The G3

  16. Cationic zinc enolates as highly active catalysts for acrylate polymerization.

    PubMed

    Garner, Logan E; Zhu, Hongping; Hlavinka, Mark L; Hagadorn, John R; Chen, Eugene Y-X

    2006-11-22

    Unprecedented cationic zinc enolates have been generated by a novel activation route involving the amido to imino ligand transformation with B(C6F5)3, structurally characterized, and utilized as highly active catalysts for the production of high molecular weight polyacrylates at ambient temperature. PMID:17105289

  17. Equilibrium partitioning and subsequent re-distribution of halogens among apatite-biotite-amphibole assemblages from mantle-derived plutonic rocks: Complexities revealed

    NASA Astrophysics Data System (ADS)

    Teiber, Holger; Scharrer, Manuel; Marks, Michael A. W.; Arzamastsev, Andrei A.; Wenzel, Thomas; Markl, Gregor

    2015-04-01

    The concentration of halogens in apatite, biotite and amphibole is investigated for a large variety of mantle-derived plutonic rocks (gabbros, diorites, monzonites, olivine- and pyroxene-bearing monzonitic to granitic rocks, syenites, carbonatites and a phoscorite). In all rocks studied, apatite occurs as an early magmatic phase, whereas biotite and amphibole may occur either as a late magmatic phase or as late-stage, potentially hydrothermal product replacing precursor olivine, pyroxene and Fe-Ti oxides (ilmenite and magnetite). Based on electron microprobe analyses for F and Cl and detailed textural observations, we test existing models of halogen partitioning between apatite and biotite. Bromine concentration data for apatite, biotite and amphibole are used to further refine our understanding of the geochemical similarities and differences between Cl and Br during magmatic and hydrothermal processes. Our data suggests that F and Cl contents in apatite, biotite and amphibole can indeed be useful monitors of the halogen systematics in magmas, but they may also be subject to post-magmatic changes to variable extents. The relatively small radius and compatible F cation seems to be less prone to post-magmatic alteration and is likely to best reflect the original magmatic halogen abundances - especially in apatite. However, the larger and probably more incompatible Cl anion, is more easily re-mobilized as reflected by strong redistribution of Cl in biotite and amphibole which have been clearly overprinted by hydrothermal fluids. In certain cases, the ability of halogens to re-distribute themselves after magmatic equilibrium partitioning (as emphasized by our data) suggests that observed partitioning (especially between apatite and biotite) may also be used as a very sensitive indicator for post-magmatic hydrothermal processes.

  18. Advanced Aqueous Separation Systems for Actinide Partitioning

    SciTech Connect

    Nash, Ken; Martin, Leigh; Lumetta, Gregg

    2015-04-02

    One of the most challenging aspects of advanced processing of used nuclear fuel is the separation of transplutonium actinides from fission product lanthanides. This separation is essential if actinide transmutation options are to be pursued in advanced fuel cycles, as lanthanides compete with actinides for neutrons in both thermal and fast reactors, thus limiting efficiency. The separation is difficult because the chemistry of Am3+ and Cm3+ is nearly identical to that of the trivalent lanthanides (Ln3+). The prior literature teaches that two approaches offer the greatest probability of devising a successful group separation process based on aqueous processes: 1) the application of complexing agents containing ligand donor atoms that are softer than oxygen (N, S, Cl-) or 2) changing the oxidation state of Am to the IV, V, or VI state to increase the essential differences between Am and lanthanide chemistry (an approach utilized in the PUREX process to selectively remove Pu4+ and UO22+ from fission products). The latter approach offers the additional benefit of enabling a separation of Am from Cm, as Cm(III) is resistant to oxidation and so can easily be made to follow the lanthanides. The fundamental limitations of these approaches are that 1) the soft(er) donor atoms that interact more strongly with actinide cations than lanthanides form substantially weaker bonds than oxygen atoms, thus necessitating modification of extraction conditions for adequate phase transfer efficiency, 2) soft donor reagents have been seen to suffer slow phase transfer kinetics and hydro-/radiolytic stability limitations and 3) the upper oxidation states of Am are all moderately strong oxidants, hence of only transient stability in media representative of conventional aqueous separations systems. There are examples in the literature of both approaches having been described. However, it is not clear at present that any extant process is sufficiently robust for application at the scale

  19. Does cation break the cyano bond? A critical evaluation of nitrile-cation interaction.

    PubMed

    Woi, Pei Meng; Bakar, Maizathul Akmam A; Rosli, Ahmad Nazmi; Lee, Vannajan Sanghiran; Ahmad, Mohd Rais; Zain, Sharifuddin; Alias, Yatimah

    2014-05-01

    DFT and G4 results reveal that cations display the following trends in imparting its positive charge to acrylonitrile; H⁺ > Li⁺ > Na⁺ > K⁺ for group I and Be²⁺ > Mg²⁺ > Ca²⁺ for group II. Solvation by water molecules and interaction with cation make the cyano bond more polarized and exhibits ketene-imine character. Bond order in nitrile-cation complexes has been predicted based on the s character of the covalent bond orbitals. Mulliken, CHELPG, and NPA charges are in good agreement in predicting positive charge buildup and GIAO nuclear deshileding on C1. G4 enthalpies show that Mg²⁺ is more strongly bound to acrylonitrile than to acetonitrile by 3 kcal mol⁻¹, and the proton affinity of the former is higher by 0.8 kcal mol⁻¹. G4 enthalpies of reductions support prior experimental observation that metalated conjugated nitriles show enhanced reactivity toward weak nucleophiles to afford Michael addition products. PMID:24770548

  20. Assimilate partitioning during reproductive growth

    SciTech Connect

    Finazzo, S.F.; Davenport, T.L.

    1987-04-01

    Leaves having various phyllotactic relationships to fruitlets were labeled for 1 hour with 10/sub r/Ci of /sup 14/CO/sub 2/. Fruitlets were also labeled. Fruitlets did fix /sup 14/CO/sub 2/. Translocation of radioactivity from the peel into the fruit occurred slowly and to a limited extent. No evidence of translocation out of the fruitlets was observed. Assimilate partitioning in avocado was strongly influenced by phyllotaxy. If a fruit and the labeled leaf had the same phyllotaxy then greater than 95% of the radiolabel was present in this fruit. When the fruit did not have the same phyllotaxy as the labeled leaf, the radiolabel distribution was skewed with 70% of the label going to a single adjacent position. Avocado fruitlets exhibit uniform labeling throughout a particular tissue. In avocado, assimilates preferentially move from leaves to fruits with the same phyllotaxy.

  1. Cationically polymerizable monomers derived from renewable sources. Annual performance report

    SciTech Connect

    Crivello, J.V.

    1992-10-01

    The objectives of this project are to design and synthesize novel monomers which orginate from renewable biological sources and to carry out their rapid, efficient, pollution-free and energy efficient cationic polymerization to useful products under the influence of ultraviolet light or heat. A summary of the results of the past year`s research on cationically polymerizable monomers derived from renewable sources is presented. Three major areas of investigation corresponding to the different classes of naturally occurring starting materials were investigated; epoxidized terpenes and natural rubber and vinyl ethers from alcohols and carbohydrates.

  2. A Partitioning Technique for Defining Instructional Groups.

    ERIC Educational Resources Information Center

    Baker, Frank B.; Hubert, Lawrence J.

    1979-01-01

    A technique is presented for partitioning N students into K groups of fixed sizes using a given measure of proximity for all student pairs. The measure of proximity is typically calculated from a set of variables and constitutes the data needed for a criterion of partition "fit." (Author)

  3. Building Ecology and Partition Design. Technical Bulletin.

    ERIC Educational Resources Information Center

    Maryland State Dept. of Education, Baltimore.

    This bulletin is intended as a resource for school system facility planners and architects who design schools. Ways in which decision makers can incorporate environmental concerns in the design of school buildings are detailed. Focus is on the design of interior partition systems. Partition systems in schools serve several purposes; they define…

  4. Photodissociation of Cerium Oxide Nanocluster Cations.

    PubMed

    Akin, S T; Ard, S G; Dye, B E; Schaefer, H F; Duncan, M A

    2016-04-21

    Cerium oxide cluster cations, CexOy(+), are produced via laser vaporization in a pulsed nozzle source and detected with time-of-flight mass spectrometry. The mass spectrum displays a strongly preferred oxide stoichiometry for each cluster with a specific number of metal atoms x, with x ≤ y. Specifically, the most prominent clusters correspond to the formula CeO(CeO2)n(+). The cluster cations are mass selected and photodissociated with a Nd:YAG laser at either 532 or 355 nm. The prominent clusters dissociate to produce smaller species also having a similar CeO(CeO2)n(+) formula, always with apparent leaving groups of (CeO2). The production of CeO(CeO2)n(+) from the dissociation of many cluster sizes establishes the relative stability of these clusters. Furthermore, the consistent loss of neutral CeO2 shows that the smallest neutral clusters adopt the same oxidation state (IV) as the most common form of bulk cerium oxide. Clusters with higher oxygen content than the CeO(CeO2)n(+) masses are present with much lower abundance. These species dissociate by the loss of O2, leaving surviving clusters with the CeO(CeO2)n(+) formula. Density functional theory calculations on these clusters suggest structures composed of stable CeO(CeO2)n(+) cores with excess oxygen bound to the surface as a superoxide unit (O2(-)). PMID:27035210

  5. Gaseous protein cations are amphoteric

    SciTech Connect

    Stephenson, J.L. Jr.; McLuckey, S.A.

    1997-02-19

    Singly- and multiply-protonated ubiquitin molecules are found to react with iodide anions, and certain other anions, by attachment of the anion, in competition with proton transfer to the anion. The resulting adduct ions are relatively weakly bound and dissociate upon collisional activation by loss of the neutral acid derived from the anion. Adduct ions that behave similarly can also be formed via ion/molecule reactions involving the neutral acid. The ion/molecule reaction phenomenology, however, stands in contrast with that expected based on the reaction site(s) being charged. Reaction rates increase inversely with charge state and the total number of neutral molecules that add to the protein cations increases inversely with cation charge. These observations are inconsistent with the formation of proton-bound clusters but are fully consistent with the formation of ion pairs or dipole/dipole bonding involving the neutral acid and neutral basic sites in the protein. The ion/ion reactions can be interpreted on the basis of conjugate acid/base chemistry in which the anion, which is a strong gaseous base, reacts with a protonated site, which is a strong gaseous acid. Adduct ions can also be formed via ion/molecule reaction which, on the basis of microscopic reversibility, implies that the neutral acid interacts with neutral basic sites on the protein cation. 26 refs., 10 figs., 1 tab.

  6. The role of natural solidification paths on REE partitioning between clinopyroxene and melt

    NASA Astrophysics Data System (ADS)

    Scarlato, P.; Mollo, S.; Blundy, J. D.; Iezzi, G.; Tiepolo, M.

    2014-03-01

    We document for the first time the role played by natural solidification paths on the partitioning of rare earth elements (REE) between clinopyroxene and melt. To do this, we investigated the compositional variation of clinopyroxenes formed under increasing cooling rate conditions from core to rim of a dike at Mt. Etna volcano. As the rate of cooling increases, clinopyroxenes are progressively depleted in Si + Ca + Mg counter-balanced by enrichments in Al + Na + Ti. Consequently, the concentration of REE in clinopyroxene increases due to an increased ease of locally balancing the excess charge at the M2 site as the number of surrounding tetrahedral aluminium atoms increases. Since Aliv in clinopyroxene is a charge-balancing cation for REE, the partition coefficients (DREE) measured at the dike chilled margin are distinctly higher than those from the dike interior. We conclude that, in naturally solidifying magmas, kinetically controlled cation substitution reactions can be treated in terms of the energetics of the various charge-imbalanced configurations. This finding is corroborated by the near-parabolic dependence of DREE on cation radius due to charge-balance mechanisms described by the lattice strain model.

  7. Neptunium(V) partitioning to uranium(VI) oxide and peroxide solids.

    PubMed

    Douglas, Matthew; Clark, Sue B; Friese, Judah I; Arey, Bruce W; Buck, Edgar C; Hanson, Brady D

    2005-06-01

    Metaschoepite, [(UO2)8O2(OH)12] x 10H2O, and metastudtite, UO4 x 4H2O, are alteration phases anticipated in a spent nuclear fuel repository following the moist oxidation of UO2 on a geologic time scale. Dissolved concentrations and hence potential mobility of other radionuclides in the fuel, such as the neptunyl cation (NpO2+), will likely be determined by the extent of their partitioning into these U(VI) solids. 237Np is of particular interest due to its potential high mobility and long half-life (2.1 x 10(6) years.) In this study, metaschoepite has been precipitated and subsequently transformed to studtite in the presence of dissolved Np. The metaschoepite and studtite solids that formed initially contained <10 and 6500 ppm Np, respectively. Batch dissolution studies of these solids at pH 6 demonstrate release of Np that exceeds congruent dissolution of U from metastudtite; furthermore, the released Np cation remains in solution. Thus, although the Np partitions into the metastudtite solid initially, it is released to solution over time, indicating that metastudtite is not likely to serve as a host solid for Np incorporation or sorption of the neptunyl cation on long time scales. PMID:15984790

  8. Purification of biomaterials by phase partitioning

    NASA Technical Reports Server (NTRS)

    Harris, J. M.

    1984-01-01

    A technique which is particularly suited to microgravity environments and which is potentially more powerful than electrophoresis is phase partitioning. Phase partitioning is purification by partitioning between the two immiscible aqueous layers formed by solution of the polymers poly(ethylene glycol) and dextran in water. This technique proved to be very useful for separations in one-g but is limited for cells because the cells are more dense than the phase solutions thus tend to sediment to the bottom of the container before reaching equilibrium with the preferred phase. There are three phases to work in this area: synthesis of new polymers for affinity phase partitioning; development of automated apparatus for ground-based separations; and design of apparatus for performing simple phase partitioning space experiments, including examination of mechanisms for separating phases in the absence of gravity.

  9. Cell partition in two phase polymer systems

    NASA Technical Reports Server (NTRS)

    Brooks, D. E.

    1979-01-01

    Aqueous phase-separated polymer solutions can be used as support media for the partition of biological macromolecules, organelles and cells. Cell separations using the technique have proven to be extremely sensitive to cell surface properties but application of the systems are limited to cells or aggregates which do not significantly while the phases are settling. Partition in zero g in principle removes this limitation but an external driving force must be applied to induce the phases to separate since their density difference disappears. We have recently shown that an applied electric field can supply the necessary driving force. We are proposing to utilize the NASA FES to study field-driven phase separation and cell partition on the ground and in zero g to help define the separation/partition process, with the ultimate goal being to develop partition as a zero g cell separation technique.

  10. Bicriterion methods for partitioning dissimilarity matrices.

    PubMed

    Brusco, Michael J; Cradit, J Dennis

    2005-11-01

    Partitioning indices associated with the within-cluster sums of pairwise dissimilarities often exhibit a systematic bias towards clusters of a particular size, whereas minimization of the partition diameter (i.e. the maximum dissimilarity element across all pairs of objects within the same cluster) does not typically have this problem. However, when the partition-diameter criterion is used, there is often a myriad of alternative optimal solutions that can vary significantly with respect to their substantive interpretation. We propose a bicriterion partitioning approach that considers both diameter and within-cluster sums in the optimization problem and facilitates selection from among the alternative optima. We developed several MATLAB-based exchange algorithms that rapidly provide excellent solutions to bicriterion partitioning problems. These algorithms were evaluated using synthetic data sets, as well as an empirical dissimilarity matrix. PMID:16293203

  11. Dense Subgraph Partition of Positive Hypergraphs.

    PubMed

    Liu, Hairong; Latecki, Longin Jan; Yan, Shuicheng

    2015-03-01

    In this paper, we present a novel partition framework, called dense subgraph partition (DSP), to automatically, precisely and efficiently decompose a positive hypergraph into dense subgraphs. A positive hypergraph is a graph or hypergraph whose edges, except self-loops, have positive weights. We first define the concepts of core subgraph, conditional core subgraph, and disjoint partition of a conditional core subgraph, then define DSP based on them. The result of DSP is an ordered list of dense subgraphs with decreasing densities, which uncovers all underlying clusters, as well as outliers. A divide-and-conquer algorithm, called min-partition evolution, is proposed to efficiently compute the partition. DSP has many appealing properties. First, it is a nonparametric partition and it reveals all meaningful clusters in a bottom-up way. Second, it has an exact and efficient solution, called min-partition evolution algorithm. The min-partition evolution algorithm is a divide-and-conquer algorithm, thus time-efficient and memory-friendly, and suitable for parallel processing. Third, it is a unified partition framework for a broad range of graphs and hypergraphs. We also establish its relationship with the densest k-subgraph problem (DkS), an NP-hard but fundamental problem in graph theory, and prove that DSP gives precise solutions to DkS for all kin a graph-dependent set, called critical k-set. To our best knowledge, this is a strong result which has not been reported before. Moreover, as our experimental results show, for sparse graphs, especially web graphs, the size of critical k-set is close to the number of vertices in the graph. We test the proposed partition framework on various tasks, and the experimental results clearly illustrate its advantages. PMID:26353260

  12. Hyperconjugation in diethyl ether cation versus diethyl sulfide cation.

    PubMed

    Morita, Masato; Matsuda, Yoshiyuki; Endo, Tomoya; Mikami, Naohiko; Fujii, Asuka; Takahashi, Kaito

    2015-09-28

    Ionization of a molecule can greatly alter its electronic structure as well as its geometric structure. In this collaborative experimental and theoretical study, we examined variance in hyperconjugation upon ionization of diethyl ether (DEE) and diethyl sulfide (DES). We obtained the experimental gas phase vibrational spectra of DEE, DES, DEE(+), DES(+), DEE(+)-Ar, and DES(+)-Ar in the wavenumber region of 2500 to 3600 cm(-1). For DEE(+) and DEE(+)-Ar, we observed a greatly red shifted CH stretching peak at 2700 cm(-1), while the lowest CH stretching peaks for DEE, DES, DES(+) and DES(+)-Ar were observed around 2850 cm(-1). For DEE(+), we calculated a drastic red shifted CH stretching peak at 2760 cm(-1), but for DEE, DES, and DES(+) the lowest CH stretching peaks were calculated to be at 2860, 2945, and 2908 cm(-1), respectively. In addition, for DEE, the minima (maxima) geometry in the neutral state becomes a maxima (minima) geometry in the cationic state, while similar minima geometries are seen in neutral and cationic states of DES. These experimental and theoretical findings were rationalized through the natural bond orbital analysis by quantifying the hyperconjugation between the σCH orbital and the ionized singly occupied p orbital of the oxygen (sulfur) in DEE(+) (DES(+)). This study showed how orientation with the ionized orbital can greatly affect the neighboring CH bond strength and its polarity, as well as the geometry of the system. Furthermore, this change in the CH bond strength between DEE(+) and DES(+) is quantified from the energies for intramolecular proton transfer in the two cations. PMID:26300267

  13. Spatial assignment of symmetry adapted perturbation theory interaction energy components: The atomic SAPT partition

    SciTech Connect

    Parrish, Robert M.; Sherrill, C. David

    2014-07-28

    We develop a physically-motivated assignment of symmetry adapted perturbation theory for intermolecular interactions (SAPT) into atom-pairwise contributions (the A-SAPT partition). The basic precept of A-SAPT is that the many-body interaction energy components are computed normally under the formalism of SAPT, following which a spatially-localized two-body quasiparticle interaction is extracted from the many-body interaction terms. For electrostatics and induction source terms, the relevant quasiparticles are atoms, which are obtained in this work through the iterative stockholder analysis (ISA) procedure. For the exchange, induction response, and dispersion terms, the relevant quasiparticles are local occupied orbitals, which are obtained in this work through the Pipek-Mezey procedure. The local orbital atomic charges obtained from ISA additionally allow the terms involving local orbitals to be assigned in an atom-pairwise manner. Further summation over the atoms of one or the other monomer allows for a chemically intuitive visualization of the contribution of each atom and interaction component to the overall noncovalent interaction strength. Herein, we present the intuitive development and mathematical form for A-SAPT applied in the SAPT0 approximation (the A-SAPT0 partition). We also provide an efficient series of algorithms for the computation of the A-SAPT0 partition with essentially the same computational cost as the corresponding SAPT0 decomposition. We probe the sensitivity of the A-SAPT0 partition to the ISA grid and convergence parameter, orbital localization metric, and induction coupling treatment, and recommend a set of practical choices which closes the definition of the A-SAPT0 partition. We demonstrate the utility and computational tractability of the A-SAPT0 partition in the context of side-on cation-π interactions and the intercalation of DNA by proflavine. A-SAPT0 clearly shows the key processes in these complicated noncovalent interactions, in

  14. Constraints on light noble gas partitioning at the conditions of spinel-peridotite melting

    NASA Astrophysics Data System (ADS)

    Jackson, Colin R. M.; Parman, Stephen W.; Kelley, Simon P.; Cooper, Reid F.

    2013-12-01

    Helium partitioning between olivine, orthopyroxene, clinopyroxene, and spinel and basaltic melt has been experimentally determined under upper mantle melting conditions (up to 20 kbar and 1450 °C). Under the conditions explored, helium partition coefficients are similar in all minerals investigated (KdHe˜10-4), suggesting He is evenly distributed between the minerals of spinel peridotite. This is in contrast to most incompatible elements, which are concentrated in clinopyroxene in spinel peridotite. The studied minerals have different concentrations of point defects, but similar He solubility, providing no evidence for He partitioning onto specific defects sites (e.g. cation vacancies). Upper limits on the partition coefficients for Ne and Ar have also been determined, constraining these elements to be moderately to highly incompatible in olivine at the conditions of spinel peridotite melting (<10-2 and <10-3, respectively). Helium partitioning in peridotite minerals varies little within the range of temperatures, pressures, and mineral compositions explored in this study. Reported partition coefficients, in combination with previous work, suggest that moderate to high degree mantle melting is not an efficient mechanism for increasing (U+Th)/He, (U+Th)/Ne, or K/Ar of the depleted mantle (DMM) through time, and consequently, supports the argument that recycling of oceanic crust is largely responsible for the relatively strong radiogenic noble gas signatures in the depleted mantle. Mantle residues with lowered (U+Th)/He, (U+Th)/Ne, and K/Ar may be produced through large extents of melting, but concentrations of noble gases will be low, unless noble gas solubility in solids deviate from Henry's Law at high fugacity.

  15. Spatial assignment of symmetry adapted perturbation theory interaction energy components: The atomic SAPT partition

    NASA Astrophysics Data System (ADS)

    Parrish, Robert M.; Sherrill, C. David

    2014-07-01

    We develop a physically-motivated assignment of symmetry adapted perturbation theory for intermolecular interactions (SAPT) into atom-pairwise contributions (the A-SAPT partition). The basic precept of A-SAPT is that the many-body interaction energy components are computed normally under the formalism of SAPT, following which a spatially-localized two-body quasiparticle interaction is extracted from the many-body interaction terms. For electrostatics and induction source terms, the relevant quasiparticles are atoms, which are obtained in this work through the iterative stockholder analysis (ISA) procedure. For the exchange, induction response, and dispersion terms, the relevant quasiparticles are local occupied orbitals, which are obtained in this work through the Pipek-Mezey procedure. The local orbital atomic charges obtained from ISA additionally allow the terms involving local orbitals to be assigned in an atom-pairwise manner. Further summation over the atoms of one or the other monomer allows for a chemically intuitive visualization of the contribution of each atom and interaction component to the overall noncovalent interaction strength. Herein, we present the intuitive development and mathematical form for A-SAPT applied in the SAPT0 approximation (the A-SAPT0 partition). We also provide an efficient series of algorithms for the computation of the A-SAPT0 partition with essentially the same computational cost as the corresponding SAPT0 decomposition. We probe the sensitivity of the A-SAPT0 partition to the ISA grid and convergence parameter, orbital localization metric, and induction coupling treatment, and recommend a set of practical choices which closes the definition of the A-SAPT0 partition. We demonstrate the utility and computational tractability of the A-SAPT0 partition in the context of side-on cation-π interactions and the intercalation of DNA by proflavine. A-SAPT0 clearly shows the key processes in these complicated noncovalent interactions, in

  16. Solubilization of pentanol by micelles of cationic surfactants and binary mixtures of cationic surfactants in aqueous solution

    SciTech Connect

    Morgan, M.E.; Uchiyama, Hirotaka; Christian, S.D.; Tucker, E.E.; Scamehorn, J.F. )

    1994-07-01

    The solubilization of pentanol in aqueous solutions of individual cationic surfactants and binary mixtures of cationic surfactants at 20[degree]C has been investigated using head-space chromatography. Complete solubilization isotherms have been determined for pentanol in micelles of the surfactants hexadecyl-pyridinium chloride (CPC), trimethyltetradecylammonium chloride (C[sub 14]Cl), benzyldimethyltetradecyl-ammonium chloride (C[sub 14]BzCl), benzyldimethylhexadecylammonium chloride (C[sub 16]BzCl), and hexadecyltrimethylammonium bromide (C[sub 16]Cl). In every case, a large decrease in the solubilization equilibrium (or partition) constant occurs on increasing the mole fraction of pentanol in the micelles (X); a factor of 3-5 reduction in the equilibrium constant occurs as X increases from nearly zero to nearly 0.9. Solubilization results have also been determined for mixed micelles of C[sub 14]Cl and C[sub 14]BzCl (system I) and CPC and C[sub 16]BzCl (system II). Large positive synergistic effects reported previously for system I and large antisynergistic effects for system II are not confirmed by the results of the present studies. For both of these mixed micellar systems, small decreases in the value of the solubilization equilibrium constant, relative to values predicted with an assumed additivity relationship, are observed. 38 refs., 10 figs., 1 tab.

  17. Ecological partitioning and diversity in tropical planktonic foraminifera

    PubMed Central

    2012-01-01

    Background Ecological processes are increasingly being viewed as an important mode of diversification in the marine environment, where the high dispersal potential of pelagic organisms, and a lack of absolute barriers to gene flow may limit the occurrence of allopatric speciation through vicariance. Here we focus on the potential role of ecological partitioning in the diversification of a widely distributed group of marine protists, the planktonic foraminifera. Sampling was conducted in the tropical Arabian Sea, during the southwest (summer) monsoon, when pronounced environmental conditions result in a strong disparity in temperature, salinity and productivity between distinct northern and southern water masses. Results We uncovered extensive genetic diversity within the Arabian Sea planktonic foraminifera, identifying 13 morphospecies, represented by 20 distinct SSU rRNA genetic types. Several morphospecies/genetic types displayed non-random biogeographical distributions, partitioning between the northern and southern water masses, giving a strong indication of independent ecological adaptations. Conclusions We propose sea-surface primary productivity as the main factor driving the geographical segregation of Arabian Sea planktonic foraminifera, during the SW monsoon, with variations in symbiotic associations possibly playing a role in the specific ecological adaptations observed. Our findings suggest that ecological partitioning could be contributing to the high levels of 'cryptic' genetic diversity observed within the planktonic foraminifera, and support the view that ecological processes may play a key role in the diversification of marine pelagic organisms. PMID:22507289

  18. Selecting optimal partitioning schemes for phylogenomic datasets

    PubMed Central

    2014-01-01

    Background Partitioning involves estimating independent models of molecular evolution for different subsets of sites in a sequence alignment, and has been shown to improve phylogenetic inference. Current methods for estimating best-fit partitioning schemes, however, are only computationally feasible with datasets of fewer than 100 loci. This is a problem because datasets with thousands of loci are increasingly common in phylogenetics. Methods We develop two novel methods for estimating best-fit partitioning schemes on large phylogenomic datasets: strict and relaxed hierarchical clustering. These methods use information from the underlying data to cluster together similar subsets of sites in an alignment, and build on clustering approaches that have been proposed elsewhere. Results We compare the performance of our methods to each other, and to existing methods for selecting partitioning schemes. We demonstrate that while strict hierarchical clustering has the best computational efficiency on very large datasets, relaxed hierarchical clustering provides scalable efficiency and returns dramatically better partitioning schemes as assessed by common criteria such as AICc and BIC scores. Conclusions These two methods provide the best current approaches to inferring partitioning schemes for very large datasets. We provide free open-source implementations of the methods in the PartitionFinder software. We hope that the use of these methods will help to improve the inferences made from large phylogenomic datasets. PMID:24742000

  19. Partition coefficients of organic compounds between water and imidazolium-, pyridinium-, and phosphonium-based ionic liquids.

    PubMed

    Padró, Juan M; Pellegrino Vidal, Rocío B; Reta, Mario

    2014-12-01

    The partition coefficients, P IL/w, of several compounds, some of them of biological and pharmacological interest, between water and room-temperature ionic liquids based on the imidazolium, pyridinium, and phosphonium cations, namely 1-octyl-3-methylimidazolium hexafluorophosphate, N-octylpyridinium tetrafluorophosphate, trihexyl(tetradecyl)phosphonium chloride, trihexyl(tetradecyl)phosphonium bromide, trihexyl(tetradecyl)phosphonium bis(trifluoromethylsulfonyl)imide, and trihexyl(tetradecyl)phosphonium dicyanamide, were accurately measured. In this way, we extended our database of partition coefficients in room-temperature ionic liquids previously reported. We employed the solvation parameter model with different probe molecules (the training set) to elucidate the chemical interactions involved in the partition process and discussed the most relevant differences among the three types of ionic liquids. The multiparametric equations obtained with the aforementioned model were used to predict the partition coefficients for compounds (the test set) not present in the training set, most being of biological and pharmacological interest. An excellent agreement between calculated and experimental log P IL/w values was obtained. Thus, the obtained equations can be used to predict, a priori, the extraction efficiency for any compound using these ionic liquids as extraction solvents in liquid-liquid extractions. PMID:25326892

  20. Synthesis, characterization, and liposome partition of a novel tetracycline derivative using the ionic liquids framework.

    PubMed

    Alves, Filipa; Oliveira, Filipe S; Schröder, Bernd; Matos, Carla; Marrucho, Isabel M

    2013-05-01

    Recently, efforts have been put on the development of new drug formulations using ionic liquid framework. In this work, two different species of abroad-spectrum polyketide antibiotic, tetracycline, are studied in terms of some important properties for antibiotics such as solubility in water and hydrophilic-hydrophobic balance. Tetracycline was used as cation, whereas docusate, a biocompatible anion, which enables the tailoring of the hydrophilicity of salts, was chosen as the anion. The developed innovative ion pair, tetracycline docusate, was characterized in terms of its thermal stability, water solubility, octanol-water, and liposome-water partition coefficients, using UV-vis spectrophotometry because of the absorbance of tetracycline around 270 nm. Egg yolk phosphatidylcholine liposomes were used as cell membrane models, and the interactions of both tetracycline hydrochloride and tetracycline docusate with the liposomes were quantified by determination of the partition coefficient using derivative spectrophotometry. A theoretical model based on simple partition drugs between two different media was used to determine the partition coefficient in liposomes. PMID:23450634

  1. Partitioning of quencher ions in the micellar microenvironment of polyoxyethylene nonyl phenol

    NASA Astrophysics Data System (ADS)

    Ghosh, Sujit Kumar; Khatua, Pijus Kanti; Ghosh, Jayanta Kumar; Bhattacharya, Subhash Chandra

    2005-01-01

    This paper has explored the quenching of fluorescence of the dye safranine T (ST) by the inorganic cations viz Cu 2+, Co 2+, Ni 2+ and Mn 2+ in micellar solutions of the surfactant dioxyethylene nonyl phenol (Igepal CO-210), pentaoxyethylene nonyl phenol (Igepal CO-520) and dodecaoxyethylene nonyl phenol (Igepal CO-720). The quenching results have been calculated in light of stern volmer equation (SV) to evaluate the extent of interaction between the fluorophore (ST) and quencher. The average concentration of the quencher ions in the micelle have been determined. The quenching efficiency of ST by inorganic ions in micellar medium is lower than that in aqueous medium. The results show that the ions get partitioned in the micellar medium. The values of the partition coefficient of the ions decrease with increase in HLB value and number of oxyethylene groups in Igepal.

  2. Photosynthate partitioning during flowering in relation to senescence of spinach

    SciTech Connect

    Sklensky, D.; Davies, P.J. )

    1990-05-01

    Male spinach plants are frequently cited as a counter-example to the nutrient drain hypothesis. Photosynthate partitioning in both male and female plants was examined. Leaves just below the inflorescences in plants at various stages of flowering were labelled with {sup 14}CO{sub 2} and the photosynthate allowed to partition for three hours. The leaves, flowers and stems of the inflorescence, and the other above ground vegetative tissue were harvested. These parts were combusted in a sample oxidizer for the collection of the {sup 14}CO{sub 2}. Allocation to the male and female flowers at very early stages are similar. As the flowers develop further, male flowers receive more photosynthate than do female flowers in early fruit production. Thus it is possible that nutrient drain to the flowers in male spinach plants is sufficient to account for senescence.

  3. Partitioning of Organic Ions to Muscle Protein: Experimental Data, Modeling, and Implications for in Vivo Distribution of Organic Ions.

    PubMed

    Henneberger, Luise; Goss, Kai-Uwe; Endo, Satoshi

    2016-07-01

    The in vivo partitioning behavior of ionogenic organic chemicals (IOCs) is of paramount importance for their toxicokinetics and bioaccumulation. Among other proteins, structural proteins including muscle proteins could be an important sorption phase for IOCs, because of their high quantity in the human and other animals' body and their polar nature. Binding data for IOCs to structural proteins are, however, severely limited. Therefore, in this study muscle protein-water partition coefficients (KMP/w) of 51 systematically selected organic anions and cations were determined experimentally. A comparison of the measured KMP/w with bovine serum albumin (BSA)-water partition coefficients showed that anionic chemicals sorb more strongly to BSA than to muscle protein (by up to 3.5 orders of magnitude), while cations sorb similarly to both proteins. Sorption isotherms of selected IOCs to muscle protein are linear (i.e., KMP/w is concentration independent), and KMP/w is only marginally influenced by pH value and salt concentration. Using the obtained data set of KMP/w a polyparameter linear free energy relationship (PP-LFER) model was established. The derived equation fits the data well (R(2) = 0.89, RMSE = 0.29). Finally, it was demonstrated that the in vitro measured KMP/w values of this study have the potential to be used to evaluate tissue-plasma partitioning of IOCs in vivo. PMID:27265315

  4. Cation separations using a proton-ionizable macrocycle in a dual module hollow fiber membrane system

    SciTech Connect

    Izatt, R.M.; Lamb, J.D.; Bruening, R.L.; Chuan Wang; Edge, N.; Bradshaw, J.S.

    1993-01-01

    Separation of metal cations in aqueous solution using a proton-ionizable macrocycle in a dual module hollow fiber membrane system is described. The advantages of this system, such as easy access to all phases, rapid transport rates, and the potential for continuous operation are maintained with the proton-ionizable macrocycles which allow for proton driven transport. Transport is diffusion limited in the organic phase boundary layer near and on the fibers. Hence, the selectivity of the extraction system is maintained. Selective transport of Ag{sup +} over all other cations tested from neutral source phases and of K{sup +} over other alkali metal cations from basic source phases using a triazole-18-crown-6 carrier has been demonstrated. Selective K{sup +} transport from less basic source phases has been demonstrated using the more acidic thiopyridone-18-crown-6 ligand. However, the large aqueous partition of this ligand makes it difficult to maintain it in the organic phase. Design of the separation systems requires a knowledge of extraction equilibrium constants and partition coefficients. These data have been measured in order to understand these membrane systems.

  5. Partitioning of regular computation on multiprocessor systems

    NASA Technical Reports Server (NTRS)

    Lee, Fung Fung

    1988-01-01

    Problem partitioning of regular computation over two dimensional meshes on multiprocessor systems is examined. The regular computation model considered involves repetitive evaluation of values at each mesh point with local communication. The computational workload and the communication pattern are the same at each mesh point. The regular computation model arises in numerical solutions of partial differential equations and simulations of cellular automata. Given a communication pattern, a systematic way to generate a family of partitions is presented. The influence of various partitioning schemes on performance is compared on the basis of computation to communication ratio.

  6. How pervasive is the Hirshfeld partitioning?

    SciTech Connect

    Heidar-Zadeh, Farnaz; Ayers, Paul W.

    2015-01-28

    One can partition the molecular density into its atomic contributions by minimizing the divergence of the atom-in-molecule densities from their corresponding reference pro-atomic densities, subject to the constraint that the sum of the atom-in-molecule densities is the total molecular density. We expose conditions on the divergence measure that are necessary, and sufficient, to recover the popular Hirshfeld partitioning. Specifically, among all local measures of the divergence between two probability distribution functions, the Hirshfeld partitioning is obtained only for f-divergences.

  7. Convex Regression with Interpretable Sharp Partitions

    PubMed Central

    Petersen, Ashley; Simon, Noah; Witten, Daniela

    2016-01-01

    We consider the problem of predicting an outcome variable on the basis of a small number of covariates, using an interpretable yet non-additive model. We propose convex regression with interpretable sharp partitions (CRISP) for this task. CRISP partitions the covariate space into blocks in a data-adaptive way, and fits a mean model within each block. Unlike other partitioning methods, CRISP is fit using a non-greedy approach by solving a convex optimization problem, resulting in low-variance fits. We explore the properties of CRISP, and evaluate its performance in a simulation study and on a housing price data set.

  8. Cation coordination in oxychloride glasses

    NASA Astrophysics Data System (ADS)

    Johnson, J. A.; Holland, D.; Bland, J.; Johnson, C. E.; Thomas, M. F.

    2003-02-01

    Glasses containing mixtures of cations and anions of nominal compositions [Sb2O3]x - [ZnCl2]1-x where x = 0.25, 0.50, 0.75, and 1.00, have been studied by means of neutron diffraction and Raman and Mössbauer spectroscopy. There is preferential bonding within the system with the absence of Sb-Cl bonds. Antimony is found to be threefold coordinated to oxygen, and zinc fourfold coordinated. The main contributing species are of the form [Sb(OSb)2(OZn)] and [Zn(ClZn)2(OSb)2].

  9. Partitioning technique for open systems

    NASA Astrophysics Data System (ADS)

    Brändas, Erkki J.

    2010-11-01

    The focus of the present contribution is essentially confined to three research areas carried out during the author's turns as visiting (assistant, associate and full) professor at the University of Florida's Quantum Theory Project, QTP. The first two topics relate to perturbation theory and spectral theory for self-adjoint operators in Hilbert space. The third subject concerns analytic extensions to non-self-adjoint problems, where particular consequences of the occurrence of continuous energy spectra are measured. In these studies general partitioning methods serve as general cover for perturbation-, variational- and general matrix theory. In addition we follow up associated inferences for the time dependent problem as well as recent results and conclusions of a rather general yet surprising character. Although the author spent most of his times at QTP during visits in the 1970s and 1980s, collaborations with department members and shorter stays continued through later decades. Nevertheless the impact must be somewhat fragmentary, yet it is hoped that the present account is sufficiently self-contained to be realistic and constructive.

  10. Lipid partitioning during cardiac stress.

    PubMed

    Kolwicz, Stephen C

    2016-10-01

    It is well documented that fatty acids serve as the primary fuel substrate for the contracting myocardium. However, extensive research has identified significant changes in the myocardial oxidation of fatty acids during acute or chronic cardiac stress. As a result, the redistribution or partitioning of fatty acids due to metabolic derangements could have biological implications. Fatty acids can be stored as triacylglycerols, serve as critical components for biosynthesis of phospholipid membranes, and form the potent signaling molecules, diacylglycerol and ceramides. Therefore, the contribution of lipid metabolism to health and disease is more intricate than a balance of uptake and oxidation. In this review, the available data regarding alterations that occur in endogenous cardiac lipid pathways during the pathological stressors of ischemia-reperfusion and pathological hypertrophy/heart failure are highlighted. In addition, changes in endogenous lipids observed in exercise training models are presented for comparison. This article is part of a Special Issue entitled: Heart Lipid Metabolism edited by G.D. Lopaschuk. PMID:27040509