Science.gov

Sample records for pseudo cereals genotypes

  1. Host genotype is an important determinant of the cereal phyllosphere mycobiome.

    PubMed

    Sapkota, Rumakanta; Knorr, Kamilla; Jørgensen, Lise Nistrup; O'Hanlon, Karen A; Nicolaisen, Mogens

    2015-09-01

    The phyllosphere mycobiome in cereals is an important determinant of crop health. However, an understanding of the factors shaping this community is lacking. Fungal diversity in leaves from a range of cultivars of winter wheat (Triticum aestivum), winter and spring barley (Hordeum vulgare) and a smaller number of samples from oat (Avena sativa), rye (Secale cereale) and triticale (Triticum × Secale) was studied using next-generation sequencing. The effects of host genotype, fungicide treatment and location on fungal communities were explored. In total, 635 251 fungal internal transcribed spacer (ITS) reads were obtained from 210 leaf samples. Visual disease assessments and relative read abundance of Zymoseptoria tritici and Ramularia collo-cygni were strongly positively related. Crop genotype at the species level explained 43% of the variance in the total dataset, followed by fungicide treatment (13%) and location (4%). Indicator species, including plant pathogens, responding to factors such as crop species, location and treatment were identified. Host genotype at both the species and cultivar level is important in shaping phyllosphere fungal communities, whereas fungicide treatment and location have minor effects. We found many host-specific fungal pathogens, but also a large diversity of fungi that were relatively insensitive to host genetic background, indicating that host-specific pathogens live in a 'sea' of nonspecific fungi. PMID:25898906

  2. Variation in chemical composition and physical characteristics of cereal grains from different genotypes.

    PubMed

    Rodehutscord, Markus; Rückert, Christine; Maurer, Hans Peter; Schenkel, Hans; Schipprack, Wolfgang; Bach Knudsen, Knud Erik; Schollenberger, Margit; Laux, Meike; Eklund, Meike; Siegert, Wolfgang; Mosenthin, Rainer

    2016-01-01

    Genotypes of cereal grains, including winter barley (n = 21), maize (n = 27), oats (n = 14), winter rye (n = 22), winter triticale (n = 21) and winter wheat (n = 29), were assayed for their chemical composition and physical characteristics as part of the collaborative research project referred to as GrainUp. Genotypes of one grain species were grown on the same site, except maize. In general, concentrations of proximate nutrients were not largely different from feed tables. The coefficient of variation (CV) for the ether extract concentration of maize was high because the data pool comprised speciality maize bred for its high oil content. A subset of 8 barley, 20 rye, 20 triticale and 20 wheat samples was analysed to differ significantly in several carbohydrate fractions. Gross energy concentration of cereal grains could be predicted from proximate nutrient concentration with good accuracy. The mean lysine concentration of protein was the highest in oats (4.2 g/16 g N) and the lowest in wheat (2.7 g/16 g N). Significant differences were also detected in the concentrations of macro elements as well as iron, manganese, zinc and copper. Concentrations of arsenic, cadmium and lead were below the limit of detection. The concentration of lower inositol phosphates was low, but some inositol pentaphosphates were detected in all grains. In barley, relatively high inositol tetraphosphate concentration also was found. Intrinsic phytase activity was the highest in rye, followed by triticale, wheat, barley and maize, and it was not detectable in oats. Substantial differences were seen in the thousand seed weight, test weight, falling number and extract viscoelasticity characteristics. The study is a comprehensive overview of the composition of different cereal grain genotypes when grown on the same location. The relevance of the variation in composition for digestibility in different animal species will be subject of other communications. PMID:26829392

  3. The Draft Genome and Transcriptome of Amaranthus hypochondriacus: A C4 Dicot Producing High-Lysine Edible Pseudo-Cereal

    PubMed Central

    Sunil, Meeta; Hariharan, Arun K.; Nayak, Soumya; Gupta, Saurabh; Nambisan, Suran R.; Gupta, Ravi P.; Panda, Binay; Choudhary, Bibha; Srinivasan, Subhashini

    2014-01-01

    Grain amaranths, edible C4 dicots, produce pseudo-cereals high in lysine. Lysine being one of the most limiting essential amino acids in cereals and C4 photosynthesis being one of the most sought-after phenotypes in protein-rich legume crops, the genome of one of the grain amaranths is likely to play a critical role in crop research. We have sequenced the genome and transcriptome of Amaranthus hypochondriacus, a diploid (2n = 32) belonging to the order Caryophyllales with an estimated genome size of 466 Mb. Of the 411 linkage single-nucleotide polymorphisms (SNPs) reported for grain amaranths, 355 SNPs (86%) are represented in the scaffolds and 74% of the 8.6 billion bases of the sequenced transcriptome map to the genomic scaffolds. The genome of A. hypochondriacus, codes for at least 24,829 proteins, shares the paleohexaploidy event with species under the superorders Rosids and Asterids, harbours 1 SNP in 1,000 bases, and contains 13.76% of repeat elements. Annotation of all the genes in the lysine biosynthetic pathway using comparative genomics and expression analysis offers insights into the high-lysine phenotype. As the first grain species under Caryophyllales and the first C4 dicot genome reported, the work presented here will be beneficial in improving crops and in expanding our understanding of angiosperm evolution. PMID:25071079

  4. Use of sourdough fermentation and pseudo-cereals and leguminous flours for the making of a functional bread enriched of gamma-aminobutyric acid (GABA).

    PubMed

    Coda, Rossana; Rizzello, Carlo Giuseppe; Gobbetti, Marco

    2010-02-28

    Lactobacillus plantarum C48 and Lactococcus lactis subsp. lactis PU1, previously selected for the biosynthesis of gamma-aminobutyric acid (GABA), were used for sourdough fermentation of cereal, pseudo-cereal and leguminous flours. Chickpea, amaranth, quinoa and buckwheat were the flours most suitable to be enriched of GABA. The parameters of sourdough fermentation were optimized. Addition of 0.1mM pyridoxal phosphate, dough yield of 160, inoculum of 5 x 10(7)CFU/g of starter bacteria and fermentation for 24h at 30 degrees C were found to be the optimal conditions. A blend of buckwheat, amaranth, chickpea and quinoa flours (ratio 1:1:5.3:1) was selected and fermented with baker's yeast (non-conventional flour bread, NCB) or with Lb. plantarum C48 sourdough (non-conventional flour sourdough bread, NCSB) and compared to baker's yeast started wheat flour bread (WFB). NCSB had the highest concentration of free amino acids and GABA (ca. 4467 and 504 mg/kg, respectively). The concentration of phenolic compounds and antioxidant activity of NCSB bread was the highest, as well as the rate of in vitro starch hydrolysis was the lowest. Texture analysis showed that sourdough fermentation enhances several characteristics of NCSB with respect to NCB, thus approaching the features of WFB. Sensory analysis showed that sourdough fermentation allowed to get good palatability and overall taste appreciation. PMID:20071045

  5. Use of the Illumina GoldenGate assay for single nucleotide polymorphism (SNP) genotyping in cereal crops.

    PubMed

    Chao, Shiaoman; Lawley, Cindy

    2015-01-01

    Highly parallel genotyping assays, such as the GoldenGate assay developed by Illumina, capable of interrogating up to 3,072 single nucleotide polymorphisms (SNPs) simultaneously, have greatly facilitated genome-wide studies, particularly for crops with large and complex genome structures. In this report, we provide detailed information and guidelines regarding genomic DNA preparation, SNP assay design, SNP assay protocols, and genotype calling using Illumina's GenomeStudio software. PMID:25373766

  6. Use of the Illumina GoldenGate assay for single nucleotide polymorphism (SNP) genotyping in cereal crops

    Technology Transfer Automated Retrieval System (TEKTRAN)

    The highly parallel genotyping assay, such as the GoldenGate assay developed by Illumina, capable of interrogating up to 3,072 single nucleotide polymorphisms (SNPs) simultaneously, has greatly facilitated the genome-wide studies particularly for crops with large and complex genome structures. In th...

  7. BREAKFAST CEREALS

    Technology Transfer Automated Retrieval System (TEKTRAN)

    This chapter written for the Encyclopedia of Food Sciences and Nutrition summarizes the Cereal Breakfast industry in world up to 2003. The areas covered are the brief history of cereal processing, their classification i.e., ready to eat or hot cereals and their processing methods. It covers the re...

  8. Deciphering the role of NADPH oxidase in complex interactions between maize (Zea mays L.) genotypes and cereal aphids.

    PubMed

    Sytykiewicz, Hubert

    2016-07-22

    Plant NADPH oxidases (NOXs) encompass a group of membrane-bound enzymes participating in formation of reactive oxygen species (ROS) under physiological conditions as well as in response to environmental stressors. The purpose of the survey was to unveil the role of NADPH oxidase in pro-oxidative responses of maize (Zea mays L.) seedling leaves exposed to cereal aphids' infestation. The impact of apteral females of bird cherry-oat aphid (Rhopalosiphum padi L.) and grain aphid (Sitobion avenae F.) feeding on expression levels of all four NADPH oxidase genes (rbohA, rbohB, rbohC, rbohD) and total activity of NOX enzyme in maize plants were investigated. In addition, inhibitory effect of diphenylene iodonium (DPI) pre-treatment on NOX activity and hydrogen peroxide content in aphid-stressed maize seedlings was studied. Leaf infestation biotests were accomplished on 14-day-old seedlings representing two aphid-resistant varieties (Ambrozja and Waza) and two aphid-susceptible ones (Tasty Sweet and Złota Karłowa). Insects' attack led to profound upregulation of rbohA and rbohD genes in tested host plants, lower elevations were noted in level of rbohB mRNA, whereas abundance of rbohC transcript was not significantly altered. It was uncovered aphid-induced enhancement of NOX activity in examined plants. Higher increases in expression of all investigated rboh genes and activity of NADPH oxidase occurred in tissues of more resistant maize cultivars than in susceptible ones. Furthermore, DPI treatment resulted in strong reduction of NOX activity and H2O2 accumulation in aphid-infested Z. mays plants, thus evidencing circumstantial role of the enzyme in insect-elicited ROS generation. PMID:27178208

  9. Electronic Cereal.

    ERIC Educational Resources Information Center

    Frentrup, Julie R.; Phillips, Donald B.

    1996-01-01

    Describes activities that use Froot Loops breakfast cereal to help students master the concepts of valence electrons and chemical bonding and the implications of the duet and octet rules. Involves students working in groups to create electron dot structures for various compounds. (JRH)

  10. Cereal Germplasm Resources

    Technology Transfer Automated Retrieval System (TEKTRAN)

    Germplasm resources for the cereals are available from several sources. This paper discusses the history of germplasm banks, types of germplasm available and where to request seeds for different cereal species from....

  11. Classifying Cereal Data

    Cancer.gov

    The DSQ includes questions about cereal intake and allows respondents up to two responses on which cereals they consume. We classified each cereal reported first by hot or cold, and then along four dimensions: density of added sugars, whole grains, fiber, and calcium.

  12. Oxalate content of cereals and cereal products.

    PubMed

    Siener, Roswitha; Hönow, Ruth; Voss, Susanne; Seidler, Ana; Hesse, Albrecht

    2006-04-19

    Detailed knowledge of food oxalate content is of essential importance for dietary treatment of recurrent calcium oxalate urolithiasis. Dietary oxalate can contribute considerably to the amount of urinary oxalate excretion. Because cereal foods play an important role in daily nutrition, the soluble and total oxalate contents of various types of cereal grains, milling products, bread, pastries, and pasta were analyzed using an HPLC-enzyme-reactor method. A high total oxalate content (>50 mg/100 g) was found in whole grain wheat species Triticum durum (76.6 mg/100 g), Triticum sativum (71.2 mg/100 g), and Triticum aestivum (53.3 mg/100 g). Total oxalate content was comparably high in whole grain products of T. aestivum, that is, wheat flakes and flour, as well as in whole grain products of T. durum, that is, couscous, bulgur, and pasta. The highest oxalate content was demonstrated for wheat bran (457.4 mg/100 g). The higher oxalate content in whole grain than in refined grain cereals suggests that oxalic acid is primarily located in the outer layers of cereal grains. Cereals and cereal products contribute to the daily oxalate intake to a considerable extent. Vegetarian diets may contain high amounts of oxalate when whole grain wheat and wheat products are ingested. Recommendations for prevention of recurrence of calcium oxalate stone disease have to take into account the oxalate content of these foodstuffs. PMID:16608223

  13. A positive genotype-phenotype correlation in a large cohort of patients with Pseudohypoparathyroidism Type Ia and Pseudo-pseudohypoparathyroidism and 33 newly identified mutations in the GNAS gene.

    PubMed

    Thiele, Susanne; Werner, Ralf; Grötzinger, Joachim; Brix, Bettina; Staedt, Pia; Struve, Dagmar; Reiz, Benedikt; Farida, Jennane; Hiort, Olaf

    2015-03-01

    Maternally inherited inactivating GNAS mutations are the most common cause of parathyroid hormone (PTH) resistance and Albright hereditary osteodystrophy (AHO) leading to pseudohypoparathyroidism type Ia (PHPIa) due to Gsα deficiency. Paternally inherited inactivating mutations lead to isolated AHO signs characterizing pseudo-pseudohypoparathyroidism (PPHP). Mutations are distributed throughout the Gsα coding exons of GNAS and there is a lack of genotype-phenotype correlation. In this study, we sequenced exon 1-13 of GNAS in a large cohort of PHPIa- and PPHP patients and identified 58 different mutations in 88 patients and 27 relatives. Thirty-three mutations including 15 missense mutations were newly discovered. Furthermore, we found three hot spots: a known hotspot (p.D190MfsX14), a second at codon 166 (p.R166C), and a third at the exon 5 acceptor splice site (c.435 + 1G>A), found in 15, 5, and 4 unrelated patients, respectively. Comparing the clinical features to the molecular genetic data, a significantly higher occurrence of subcutaneous calcifications in patients harboring truncating versus missense mutations was demonstrated. Thus, in the largest cohort of PHPIa patients described to date, we extend the spectrum of known GNAS mutations and hot spots and demonstrate for the first time a correlation between the genetic defects and the expression of a clinical AHO-feature. PMID:25802881

  14. Cereal beta-glucans

    Technology Transfer Automated Retrieval System (TEKTRAN)

    Cereal beta-glucans occur predominantly in oats and barley, but can be found in other cereals. Beta-glucan structure is a mixture of single beta-1,3-linkages and consecutive beta-1,4-linkages, and cellotriosyl and cellotetraosyl units typically make up 90-95% of entire molecule. Lichenase can hydr...

  15. Trichothecenes in Cereal Grains

    PubMed Central

    Foroud, Nora A.; Eudes, François

    2009-01-01

    Trichothecenes are sesquiterpenoid mycotoxins associated with fusarium head blight (FHB) of cereals, with worldwide economic and health impacts. While various management strategies have been proposed to reduce the mycotoxin risk, breeding towards FHB-resistance appears to be the most effective means to manage the disease, and reduce trichothecene contamination of cereal-based food products. This review provides a brief summary of the trichothecene synthesis in Fusarium species, their toxicity in plants and humans, followed by the current methods of screening and breeding for resistance to FHB and trichothecene accumulation. PMID:19333439

  16. Genotypic variation in the ability of landraces and commercial cereal varieties to avoid manganese deficiency in soils with limited manganese availability: is there a role for root-exuded phytases?

    PubMed

    George, Timothy S; French, Andrew S; Brown, Lawrie K; Karley, Alison J; White, Philip J; Ramsay, Luke; Daniell, Tim J

    2014-07-01

    The marginal agricultural-systems of the Machair in the Western Isles of Scotland often have limited micronutrient availability because of alkaline soils. Traditional landraces of oats, barley and rye are thought to be better adapted to cope with the limited manganese (Mn) availability of these soils. When commercial cultivars are grown on the Machair, limited Mn-availability reduces crop yield and quality. We hypothesised that traditional cereal landraces selected on the Machair acquire Mn more effectively and that this could be linked to exudation of phytase from roots which would release Mn complexed with inositol phosphates. Growth and Mn-acquisition of five landraces and three commercial cultivars of barley and oats were determined in Machair soil. In addition, root phytase activities were assayed under Mn-starvation and sufficiency in hydroponics. In Machair soil, landraces had greater capacity for acquiring Mn and a greater ability to achieve maximum yield compared to the commercial cultivars. Under Mn-starvation, root phytase exudation was upregulated in all plants, suggesting that this trait might allow cereals to acquire more Mn when Mn-availability is limited. In the landraces, exuded phytase activity related positively to relative Mn-accumulation, whereas in the commercial cultivars this relationship was negative, suggesting that this trait may be secondary to an efficiency trait that has been lost from commercial germplasm by breeding. This research shows that cereal landraces possess traits that could be useful for improving the Mn-acquisition of commercial varieties. Exploiting the genetic diversity of landraces could improve the sustainability of agriculture on marginal calcareous lands globally. PMID:24438182

  17. Extracting Iron from Cereal.

    ERIC Educational Resources Information Center

    Katz, David A.

    1992-01-01

    Describes an activity in which students can investigate and evaluate the amount of iron found in most fortified breakfast cereals or cream of wheat. Includes a list of necessary materials, safety precautions, experimental procedure, disposal protocol, and nutritional explanation, utilization, and variations. (JJK)

  18. Cereal Box Totems.

    ERIC Educational Resources Information Center

    Jones, AnnMarie

    2002-01-01

    Presents a multicultural project used with fourth-grade students in which they created a three-dimensional totem pole using leftover cereal boxes. Discusses in detail how to create the totem pole. Explains that students learned about Northwest American Indians in class. (CMK)

  19. Design and Management of Field Trials of Transgenic Cereals

    NASA Astrophysics Data System (ADS)

    Bedő, Zoltán; Rakszegi, Mariann; Láng, László

    The development of gene transformation systems has allowed the introgression of alien genes into plant genomes, thus providing a mechanism for broadening the genetic resources available to plant breeders. The design and the management of field trials vary according to the purpose for which transgenic cereals are developed. Breeders study the phenotypic and genotypic stability of transgenic plants, monitor the increase in homozygosity of transgenic genotypes under field conditions, and develop backcross generations to transfer the introduced genes into secondary transgenic cereal genotypes. For practical purposes, they may also multiply seed of the transgenic lines to produce sufficient amounts of grain for the detailed analysis of trait(s) of interest, to determine the field performance of transgenic lines, and to compare them with the non-transformed parental genotypes. Prior to variety registration, the Distinctness, Uniformity and Stability (DUS) tests and Value for Cultivation and Use (VCU) experiments are carried out in field trials. Field testing includes specific requirements for transgenic cereals to assess potential environmental risks. The capacity of the pollen to survive, establish and disseminate in the field test environment, the potential for gene transfer, the effects of products expressed by the introduced sequences and phenotypic and genotypic instability that might cause deleterious effects must all be specifically monitored, as required by EU Directives 2003/701/EC (1) on the release of genetically modified higher plants in the environment.

  20. Modeling branching in cereals

    PubMed Central

    Evers, Jochem B.; Vos, Jan

    2013-01-01

    Cereals and grasses adapt their structural development to environmental conditions and the resources available. The primary adaptive response is a variable degree of branching, called tillering in cereals. Especially for heterogeneous plant configurations the degree of tillering varies per plant. Functional–structural plant modeling (FSPM) is a modeling approach allowing simulation of the architectural development of individual plants, culminating in the emergent behavior at the canopy level. This paper introduces the principles of modeling tillering in FSPM, using (I) a probability approach, forcing the dynamics of tillering to correspond to measured probabilities. Such models are particularly suitable to evaluate the effect structural variables on system performance. (II) Dose–response curves, representing a measured or assumed response of tillering to an environmental cue. (III) Mechanistic approaches to tillering including control by carbohydrates, hormones, and nutrients. Tiller senescence is equally important for the structural development of cereals as tiller appearance. Little study has been made of tiller senescence, though similar concepts seem to apply as for tiller appearance. PMID:24133499

  1. Winter cereal canopy effect on cereal and interseeded legume productivity

    Technology Transfer Automated Retrieval System (TEKTRAN)

    Interseeding red clover (Trifolium pratense L.) or alfalfa (Medicago sativa L.) into winter cereals in the North Central USA can provide forage and a green manure crop. We hypothesize that winter cereal canopy traits such as leaf area index (LAI) and whole plant dry matter (DM) influence interseeded...

  2. Insect vector interations and transmission of cereal infecting Cereal rhabdoviruses

    Technology Transfer Automated Retrieval System (TEKTRAN)

    The cereal infecting cytorhabdoviruses and nucelorhabdoviruses are transmitted to new plant hosts in a persistent, propagative manner by their leafhopper (Cicadellidae) and planthopper (Fulgoroidea) vectors. We discuss our current knowledge of virus acquisition by, replication and movement in, and ...

  3. Camelina: Adaptation and performance of genotypes

    Technology Transfer Automated Retrieval System (TEKTRAN)

    Camelina (Camelina sativa L. Crantz) has shown potential as an alternative and biofuel crop in cereal-based cropping systems. Our study investigated the adaption, performance, and yield stability among camelina genotypes across diverse US Pacific Northwest (PNW) environments. Seven named camelina ge...

  4. Pseudo-outbreak of pre-extensively drug-resistant (Pre-XDR) tuberculosis in Kinshasa: collateral damage caused by false detection of fluoroquinolone resistance by GenoType MTBDRsl.

    PubMed

    Kaswa, Michel K; Aloni, Muriel; Nkuku, Léontine; Bakoko, Brian; Lebeke, Rossin; Nzita, Albert; Muyembe, Jean Jacques; de Jong, Bouke C; de Rijk, Pim; Verhaegen, Jan; Boelaert, Marleen; Ieven, Margareta; Van Deun, Armand

    2014-08-01

    Fluoroquinolones are the core drugs for the management of multidrug-resistant tuberculosis (MDR-TB). Molecular drug susceptibility testing methods provide considerable advantages for scaling up programmatic management and surveillance of drug-resistant TB. We describe here the misidentification of fluoroquinolone resistance by the GenoType MTBDRsl (MTBDRsl) (Hain Lifescience GmbH, Nehren, Germany) line probe assay (LPA) encountered during a feasibility and validation study for the introduction of this rapid drug susceptibility test in Kinshasa, Democratic Republic of Congo. The double gyrA mutation 80Ala and 90Gly represented 57% of all fluoroquinolone mutations identified from MDR-TB patient sputum samples, as confirmed by DNA sequencing. This double mutation was previously found to be associated with susceptibility to fluoroquinolones, yet it leads to absent hybridization of a wild-type band in the MTBDRsl and is thus falsely scored as resistance. Our findings suggest that MTBDRsl results must be interpreted with caution when the interpretation is based solely on the absence of a wild-type band without confirmation by visualization of a mutant band. Performance of the MTBDRsl LPA might be improved by replacing the gyrA wild-type probes by additional probes specific for well-documented gyrA mutations that confer clinically relevant resistance. PMID:24871222

  5. Influence of Host and Geographic Locale on the Distribution of Colletotrichum cereale Lineages

    PubMed Central

    Beirn, Lisa A.; Clarke, Bruce B.; Crouch, Jo Anne

    2014-01-01

    Colletotrichum cereale is an ascomycete inhabitant of cool-season Pooideae grasses. The fungus has increased in frequency over the past decade as a destructive pathogen of Poa annua and Agrostis stolonifera turfgrass. Colletotrichum cereale exists as two lineages, designated clades A and B, but little is known about the distribution of these clades in natural environments, or what role these subdivisions may play in the trajectory of disease outbreaks. In this study, our objective was to determine the frequency of C. cereale clades A and B. To rapidly discriminate between the two C. cereale clades, a real-time PCR assay was developed based on the Apn2 gene. A collection of 700 C. cereale pathogens and endophytes from twenty Pooideae grass genera were genotyped. 87% of the collection was identifed as part of clade A, 11.7% as part of clade B, and 1.3% was a mixture. Colletotrichum cereale from turfgrass hosts in North America were most commonly members of clade A (78%). The overabundance of clade A in turfgrass isolates was directly attributable to the dominance of this lineage from southern sampling sites, irrespective of host. In contrast, 111 C. cereale turfgrass isolates collected from northern sampling sites were evenly distributed between clades A and B. Only 28% of C. cereale from A. stolonifera at northern sampling sites were part of clade A. These data show that environmental factors such as geographic location and host identity likely played a role in the distribution of the major C. cereale clades in North American turfgrass. PMID:24842654

  6. Influence of host and geographic locale on the distribution of Colletotrichum cereale lineages.

    PubMed

    Beirn, Lisa A; Clarke, Bruce B; Crouch, Jo Anne

    2014-01-01

    Colletotrichum cereale is an ascomycete inhabitant of cool-season Pooideae grasses. The fungus has increased in frequency over the past decade as a destructive pathogen of Poa annua and Agrostis stolonifera turfgrass. Colletotrichum cereale exists as two lineages, designated clades A and B, but little is known about the distribution of these clades in natural environments, or what role these subdivisions may play in the trajectory of disease outbreaks. In this study, our objective was to determine the frequency of C. cereale clades A and B. To rapidly discriminate between the two C. cereale clades, a real-time PCR assay was developed based on the Apn2 gene. A collection of 700 C. cereale pathogens and endophytes from twenty Pooideae grass genera were genotyped. 87% of the collection was identifed as part of clade A, 11.7% as part of clade B, and 1.3% was a mixture. Colletotrichum cereale from turfgrass hosts in North America were most commonly members of clade A (78%). The overabundance of clade A in turfgrass isolates was directly attributable to the dominance of this lineage from southern sampling sites, irrespective of host. In contrast, 111 C. cereale turfgrass isolates collected from northern sampling sites were evenly distributed between clades A and B. Only 28% of C. cereale from A. stolonifera at northern sampling sites were part of clade A. These data show that environmental factors such as geographic location and host identity likely played a role in the distribution of the major C. cereale clades in North American turfgrass. PMID:24842654

  7. The Cereal Box Problem Revisited.

    ERIC Educational Resources Information Center

    Wilkins, Jesse L. M.

    1999-01-01

    Investigates the cereal box problem using both an experimental and theoretical framework, and Monte Carlo methods. Using empirical data, students can discover patterns and relationships that help them understand the origin of the theoretical solution to the problem. Contains 17 references. (Author/ASK)

  8. PSEUDO-CODEWORD LANDSCAPE

    SciTech Connect

    CHERTKOV, MICHAEL; STEPANOV, MIKHAIL

    2007-01-10

    The authors discuss performance of Low-Density-Parity-Check (LDPC) codes decoded by Linear Programming (LP) decoding at moderate and large Signal-to-Noise-Ratios (SNR). Frame-Error-Rate (FER) dependence on SNR and the noise space landscape of the coding/decoding scheme are analyzed by a combination of the previously introduced instanton/pseudo-codeword-search method and a new 'dendro' trick. To reduce complexity of the LP decoding for a code with high-degree checks, {ge} 5, they introduce its dendro-LDPC counterpart, that is the code performing identifically to the original one under Maximum-A-Posteriori (MAP) decoding but having reduced (down to three) check connectivity degree. Analyzing number of popular LDPC codes and their dendro versions performing over the Additive-White-Gaussian-Noise (AWGN) channel, they observed two qualitatively different regimes: (i) error-floor sets early, at relatively low SNR, and (ii) FER decays with SNR increase faster at moderate SNR than at the largest SNR. They explain these regimes in terms of the pseudo-codeword spectra of the codes.

  9. On pseudo-Boolean polynomials

    NASA Astrophysics Data System (ADS)

    Leont'ev, V. K.

    2015-11-01

    A pseudo-Boolean function is an arbitrary mapping of the set of binary n-tuples to the real line. Such functions are a natural generalization of classical Boolean functions and find numerous applications in various applied studies. Specifically, the Fourier transform of a Boolean function is a pseudo-Boolean function. A number of facts associated with pseudo-Boolean polynomials are presented, and their applications to well-known discrete optimization problems are described.

  10. Microbiological Spoilage of Cereal Products

    NASA Astrophysics Data System (ADS)

    Cook, Frederick K.; Johnson, Billie L.

    A wide range of cereal products, including bakery items, refrigerated dough, fresh pasta products, dried cereal products, snack foods, and bakery mixes, are manufactured for food consumption. These products are subject to physical, chemical, and microbiological spoilage that affects the taste, aroma, leavening, appearance, and overall quality of the end consumer product. Microorganisms are ubiquitous in nature and have the potential for causing food spoilage and foodborne disease. However, compared to other categories of food products, bakery products rarely cause food poisoning. The heat that is applied during baking or frying usually eliminates pathogenic and spoilage microorganisms, and low moisture contributes to product stability. Nevertheless, microbiological spoilage of these products occurs, resulting in substantial economic losses.

  11. Cereal transformation through particle bombardment

    NASA Technical Reports Server (NTRS)

    Casas, A. M.; Kononowicz, A. K.; Bressan, R. A.; Hasegawa, P. M.; Mitchell, C. A. (Principal Investigator)

    1995-01-01

    The review focuses on experiments that lead to stable transformation in cereals using microprojectile bombardment. The discussion of biological factors that affect transformation examines target tissues and vector systems for gene transfer. The vector systems include reporter genes, selectable markers, genes of agronomic interest, and vector constructions. Other topics include physical parameters that affect DNA delivery, selection of stably transformed cells and plant regeneration, and analysis of gene expression and transmission to the progeny.

  12. Pseudo Class III malocclusion

    PubMed Central

    Al-Hummayani, Fadia M.

    2016-01-01

    The treatment of deep anterior crossbite is technically challenging due to the difficulty of placing traditional brackets with fixed appliances. This case report represents a none traditional treatment modality to treat deep anterior crossbite in an adult pseudo class III malocclusion complicated by severely retruded, supraerupted upper and lower incisors. Treatment was carried out in 2 phases. Phase I treatment was performed by removable appliance “modified Hawley appliance with inverted labial bow,” some modifications were carried out to it to suit the presented case. Positive overbite and overjet was accomplished in one month, in this phase with minimal forces exerted on the lower incisors. Whereas, phase II treatment was performed with fixed appliances (braces) to align teeth and have proper over bite and overjet and to close posterior open bite, this phase was accomplished within 11 month. PMID:27052290

  13. Impacts of Cereal Ergot in Food Animal Production.

    PubMed

    Coufal-Majewski, Stephanie; Stanford, Kim; McAllister, Tim; Blakley, Barry; McKinnon, John; Chaves, Alexandre Vieira; Wang, Yuxi

    2016-01-01

    The negative impacts of ergot contamination of grain on the health of humans and animals were first documented during the fifth century AD. Although ergotism is now rare in humans, cleaning contaminated grain concentrates ergot bodies in screenings which are used as livestock feed. Ergot is found worldwide, with even low concentrations of alkaloids in the diet (<100 ppb total), reducing the growth efficiency of livestock. Extended periods of increased moisture and cold during flowering promote the development of ergot in cereal crops. Furthermore, the unpredictability of climate change may have detrimental impacts to important cereal crops, such as wheat, barley, and rye, favoring ergot production. Allowable limits for ergot in livestock feed are confusing as they may be determined by proportions of ergot bodies or by total levels of alkaloids, measurements that may differ widely in their estimation of toxicity. The proportion of individual alkaloids, including ergotamine, ergocristine, ergosine, ergocornine, and ergocryptine is extremely variable within ergot bodies and the relative toxicity of these alkaloids has yet to be determined. This raises concerns that current recommendations on safe levels of ergot in feeds may be unreliable. Furthermore, the total ergot alkaloid content is greatly dependent on the geographic region, harvest year, cereal species, variety, and genotype. Considerable animal-to-animal variation in the ability of the liver to detoxify ergot alkaloids also exists and the impacts of factors, such as pelleting of feeds or use of binders to reduce bioavailability of alkaloids require study. Accordingly, unknowns greatly outnumber the knowns for cereal ergot and further study to help better define allowable limits for livestock would be welcome. PMID:26942186

  14. Impacts of Cereal Ergot in Food Animal Production

    PubMed Central

    Coufal-Majewski, Stephanie; Stanford, Kim; McAllister, Tim; Blakley, Barry; McKinnon, John; Chaves, Alexandre Vieira; Wang, Yuxi

    2016-01-01

    The negative impacts of ergot contamination of grain on the health of humans and animals were first documented during the fifth century AD. Although ergotism is now rare in humans, cleaning contaminated grain concentrates ergot bodies in screenings which are used as livestock feed. Ergot is found worldwide, with even low concentrations of alkaloids in the diet (<100 ppb total), reducing the growth efficiency of livestock. Extended periods of increased moisture and cold during flowering promote the development of ergot in cereal crops. Furthermore, the unpredictability of climate change may have detrimental impacts to important cereal crops, such as wheat, barley, and rye, favoring ergot production. Allowable limits for ergot in livestock feed are confusing as they may be determined by proportions of ergot bodies or by total levels of alkaloids, measurements that may differ widely in their estimation of toxicity. The proportion of individual alkaloids, including ergotamine, ergocristine, ergosine, ergocornine, and ergocryptine is extremely variable within ergot bodies and the relative toxicity of these alkaloids has yet to be determined. This raises concerns that current recommendations on safe levels of ergot in feeds may be unreliable. Furthermore, the total ergot alkaloid content is greatly dependent on the geographic region, harvest year, cereal species, variety, and genotype. Considerable animal-to-animal variation in the ability of the liver to detoxify ergot alkaloids also exists and the impacts of factors, such as pelleting of feeds or use of binders to reduce bioavailability of alkaloids require study. Accordingly, unknowns greatly outnumber the knowns for cereal ergot and further study to help better define allowable limits for livestock would be welcome. PMID:26942186

  15. Evaluating Healthful Properties of Cereals and Cereal Fractions by Their Bile-Acid-Binding Potential

    Technology Transfer Automated Retrieval System (TEKTRAN)

    The healthful, cholesterol-lowering (atherosclerosis amelioration) or detoxification of harmful metabolites (cancer prevention) potential of cereals and cereal fractions could be predicted by evaluating their in vitro bile acid binding under physiological conditions. Using equal dry matter per incu...

  16. Evaluation of Breakfast Cereals and Cereal Advertising by a Young Adult Audience.

    ERIC Educational Resources Information Center

    Gagnard, Alice

    A study examined the knowledge of and attitudes toward nutrition in general and specifically toward cold breakfast cereals and cereal advertising with different creative appeals. Subjects, 117 undergraduate university students, completed a questionnaire about their use of cold breakfast cereal and their sources of information about nutrition.…

  17. Pseudo Linear Gyro Calibration

    NASA Technical Reports Server (NTRS)

    Harman, Richard; Bar-Itzhack, Itzhack Y.

    2003-01-01

    Previous high fidelity onboard attitude algorithms estimated only the spacecraft attitude and gyro bias. The desire to promote spacecraft and ground autonomy and improvements in onboard computing power has spurred development of more sophisticated calibration algorithms. Namely, there is a desire to provide for sensor calibration through calibration parameter estimation onboard the spacecraft as well as autonomous estimation on the ground. Gyro calibration is a particularly challenging area of research. There are a variety of gyro devices available for any prospective mission ranging from inexpensive low fidelity gyros with potentially unstable scale factors to much more expensive extremely stable high fidelity units. Much research has been devoted to designing dedicated estimators such as particular Extended Kalman Filter (EKF) algorithms or Square Root Information Filters. This paper builds upon previous attitude, rate, and specialized gyro parameter estimation work performed with Pseudo Linear Kalman Filter (PSELIKA). The PSELIKA advantage is the use of the standard linear Kalman Filter algorithm. A PSELIKA algorithm for an orthogonal gyro set which includes estimates of attitude, rate, gyro misalignments, gyro scale factors, and gyro bias is developed and tested using simulated and flight data. The measurements PSELIKA uses include gyro and quaternion tracker data.

  18. Functional genomic approaches in cereal rusts

    Technology Transfer Automated Retrieval System (TEKTRAN)

    Cereal rust fungi are pathogens of major importance to agriculture, threatening cereal production world-wide. Targeted breeding for resistance, based on information from fungal surveys and population structure analyses of virulence, has been effective. Nevertheless, breakdown of resistance occurs fr...

  19. Metabolic and regulatory networks for cereals

    Technology Transfer Automated Retrieval System (TEKTRAN)

    Gramene is an open-source, curated comparative plant genomics database (www.gramene.org). In order to represent the metabolomes of cereal crops and thereby support their analysis and comparison, we develop and curate pathway databases for cereal species. The Gramene portal includes pathways for rice...

  20. Shakespeare Cereals: A Popular Culture Exercise.

    ERIC Educational Resources Information Center

    Schiff, Peter

    1997-01-01

    Offers an exercise involving popular culture to help students experience the contemporary power of Shakespeare. Explains that after reading a Shakespeare play, students develop new cereal brands based upon the work's plot, characters, or themes, afterward naming, designing, creating, and displaying the cereal package. Combines literary analysis,…

  1. Cereal Box Design: An Interdisciplinary Graphics Activity

    ERIC Educational Resources Information Center

    Fitzgerald, Mike; Tsosie, Teri

    2004-01-01

    This article describes cereal box design, an interdisciplinary graphics activity. The cereal box design activity is intriguing both for its simplicity and the resourcefulness that it can generate in young people. It lends itself to a variety of curriculums. It covers both consumerism and Design for the Environment (DfE) concepts broadly and in…

  2. Sourdough lactic acid bacteria: exploration of non-wheat cereal-based fermentation.

    PubMed

    Coda, Rossana; Cagno, Raffaella Di; Gobbetti, Marco; Rizzello, Carlo Giuseppe

    2014-02-01

    Cereal-based foods represent a very important source of biological as well as of cultural diversity, as testified by the wide range of derived fermented products. A trend that is increasingly attracting bakery industries as well as consumers is the use of non-conventional flours for the production of novel products, characterised by peculiar flavour and better nutritional value. Lactic acid bacteria microbiota of several non-wheat cereals and pseudo-cereals has been recently deeply investigated with the aim of studying the biodiversity and finding starter cultures for sourdough fermentation. Currently, the use of ancient or ethnic grains is mainly limited to traditional typical foods and the bread making process is not well standardised with consequent negative effects on the final properties. The challenge in fermenting such grains is represented by the necessity to combine good technology and sensory properties with nutritional/health benefits. The choice of the starter cultures has a critical impact on the final quality of cereal-based products, and strains that dominate and outcompete contaminants should be applied for specific sourdough fermentations. In this sense, screening and characterisation of the lactic acid bacteria microbiota is very useful in the improvement of a peculiar flour, from both a nutritional and technological point of view. PMID:24230473

  3. BARLEY DISEASES, GENETICS, AND GENOTYPING: FOR A FEW DOLLARS MORE

    Technology Transfer Automated Retrieval System (TEKTRAN)

    A brief overview of the barley-related research programs within the Cereal Crops Research Unit will be presented, followed by a brief overview of plans and progress in establishing an ARS Genotyping Laboratory. Topics covered will include research on virus diseases of barley, particularly research ...

  4. On pseudo-stochastic matrices and pseudo-positive maps

    NASA Astrophysics Data System (ADS)

    Chruściński, D.; Man'ko, V. I.; Marmo, G.; Ventriglia, F.

    2015-11-01

    Stochastic matrices and positive maps in matrix algebras have proved to be very important tools for analysing classical and quantum systems. In particular they represent a natural set of transformations for classical and quantum states, respectively. Here we introduce the notion of pseudo-stochastic matrices and consider their semigroup property. Unlike stochastic matrices, pseudo-stochastic matrices are permitted to have matrix elements which are negative while respecting the requirement that the sum of the elements of each column is one. They also allow for convex combinations, and carry a Lie group structure which permits the introduction of Lie algebra generators. The quantum analog of a pseudo-stochastic matrix exists and is called a pseudo-positive map. They have the property of transforming a subset of quantum states (characterized by maximal purity or minimal von Neumann entropy requirements) into quantum states. Examples of qubit dynamics connected with ‘diamond’ sets of stochastic matrices and pseudo-positive maps are dealt with.

  5. Cereal grains and coronary heart disease.

    PubMed

    Truswell, A S

    2002-01-01

    Cereal grains and their products provide around 30% of total energy intake in British adults, (much more than any of the other major food groups). Coronary heart disease (CHD) is the largest single cause of death in Britain and many other Western countries. This review examines the question whether there is a relation between cereal consumption and CHD. Several of the nutrients in cereals have known potential for reducing risk factors for CHD: the linoleic acid, fibre, vitamin E, selenium and folate. Cereals also contain phytoestrogens of the lignan family and several phenolic acids with antioxidant properties. Processing generally reduces the content of these nutrients and bioprotective substances. Although cereals at the farm gate are very low in salt, processed cereal foods, eg bread and some breakfast cereals, are high-salt foods and thus could contribute to raising blood pressure. Human experiments have clearly shown that oat fibre tends to lower plasma total and LDL cholesterol but wheat fibre does not. Rice bran and barley may also lower cholesterol but most people do not eat enough barley to have an effect. Cereal foods with low glycaemic index such as pasta and oats are beneficial for people with diabetes and might lower plasma lipids. Between 1996 and 2001 an accumulation of five very large cohort studies in the USA, Finland and Norway have all reported that subjects consuming relatively large amounts of whole grain cereals have significantly lower rates of CHD. This confirms an earlier report from a small British cohort. The protective effect does not seem to be due to cholesterol-lowering. While cohort studies have shown this consistent protective effect of whole grain cereals, there has been (only one) randomised controlled secondary prevention trial of advice to eat more cereal fibre. In this there was no reduction of the rate of reinfarction. The trial had some weaknesses, eg there were eight different diets, compliance was not checked objectively

  6. Chronic intestinal pseudo-obstruction

    PubMed Central

    Antonucci, Alexandra; Fronzoni, Lucia; Cogliandro, Laura; Cogliandro, Rosanna F; Caputo, Carla; Giorgio, Roberto De; Pallotti, Francesca; Barbara, Giovanni; Corinaldesi, Roberto; Stanghellini, Vincenzo

    2008-01-01

    Chronic intestinal pseudo-obstruction (CIPO) is a severe digestive syndrome characterized by derangement of gut propulsive motility which resembles mechanical obstruction, in the absence of any obstructive process. Although uncommon in clinical practice, this syndrome represents one of the main causes of intestinal failure and is characterized by high morbidity and mortality. It may be idiopathic or secondary to a variety of diseases. Most cases are sporadic, even though familial forms with either dominant or recessive autosomal inheritance have been described. Based on histological features intestinal pseudo-obstruction can be classified into three main categories: neuropathies, mesenchymopathies, and myopathies, according on the predominant involvement of enteric neurones, interstitial cells of Cajal or smooth muscle cells, respectively. Treatment of intestinal pseudo-obstruction involves nutritional, pharmacological and surgical therapies, but it is often unsatisfactory and the long-term outcome is generally poor in the majority of cases. PMID:18494042

  7. Iron in Breakfast Cereal. Demonstrations for National Chemistry Week 2004

    NASA Astrophysics Data System (ADS)

    Jacobsen, Erica K.; Maynard, James

    2004-11-01

    Cereal manufacturers have a few choices for how they include iron in their products. Some cereal manufacturers prefer to add particles of pure iron metal (called elemental iron or reduced iron) because elemental iron is stable in storage and does not affect the cereal's flavor. General Mills' brand-name "Total" is one such cereal. The addition of this strongly magnetic form of iron allows "Total" cereal to be used in the two demonstrations described in this article. In the first, a flake of "Total" cereal is inserted between the two poles of a permanent magnet. The iron in the cereal allows the flake to remain suspended between the two poles. The second uses crushed "Total" cereal and a neodymium magnet. The crushed cereal is scattered over clear Plexiglas and the magnet can be moved around underneath. This drags the iron filings through the crushed cereal.

  8. Grass Hosts Harbor More Diverse Isolates of Puccinia striiformis Than Cereal Crops.

    PubMed

    Cheng, P; Chen, X M; See, D R

    2016-04-01

    Puccinia striiformis causes stripe rust on cereal crops and many grass species. However, it is not clear whether the stripe rust populations on grasses are able to infect cereal crops and how closely they are related to each other. In this study, 103 isolates collected from wheat, barley, triticale, rye, and grasses in the United States were characterized by virulence tests and simple sequence repeat (SSR) markers. Of 69 pathotypes identified, 41 were virulent on some differentials of wheat only, 10 were virulent on some differentials of barley only, and 18 were virulent on some differentials of both wheat and barley. These pathotypes were clustered into three groups: group one containing isolates from wheat, triticale, rye, and grasses; group two isolates were from barley and grasses; and group three isolates were from grasses and wheat. SSR markers identified 44 multilocus genotypes (MLGs) and clustered them into three major molecular groups (MG) with MLGs in MG3 further classified into three subgroups. Isolates from cereal crops were present in one or more of the major or subgroups, but not all, whereas grass isolates were present in all of the major and subgroups. The results indicate that grasses harbor more diverse isolates of P. striiformis than the cereals. PMID:26667189

  9. Application of cereals and cereal components in functional foods: a review.

    PubMed

    Charalampopoulos, D; Wang, R; Pandiella, S S; Webb, C

    2002-11-15

    The food industry is directing new product development towards the area of functional foods and functional food ingredients due to consumers' demand for healthier foods. In this respect, probiotic dairy foods containing human-derived Lactobacillus and Bifidobacterium species and prebiotic food formulations containing ingredients that cannot be digested by the human host in the upper gastrointestinal tract and can selectively stimulate the growth of one or a limited number of colonic bacteria have been recently introduced into the market. The aim of these products is to affect beneficially the gut microbial composition and activities. Cereals offer another alternative for the production of functional foods. The multiple beneficial effects of cereals can be exploited in different ways leading to the design of novel cereal foods or cereal ingredients that can target specific populations. Cereals can be used as fermentable substrates for the growth of probiotic microorganisms. The main parameters that have to be considered are the composition and processing of the cereal grains, the substrate formulation, the growth capability and productivity of the starter culture, the stability of the probiotic strain during storage, the organoleptic properties and the nutritional value of the final product. Additionally, cereals can be used as sources of nondigestible carbohydrates that besides promoting several beneficial physiological effects can also selectively stimulate the growth of lactobacilli and bifidobacteria present in the colon and act as prebiotics. Cereals contain water-soluble fibre, such as beta-glucan and arabinoxylan, oilgosaccharides, such as galacto- and fructo-oligosaccharides and resistant starch, which have been suggested to fulfil the prebiotic concept. Separation of specific fractions of fibre from different cereal varieties or cereal by-products, according to the knowledge of fibre distribution in cereal grains, could be achieved through processing

  10. Molecular Genetics of Disease Resistance in Cereals

    PubMed Central

    AYLIFFE, MICHAEL A.; LAGUDAH, EVANS S.

    2004-01-01

    • Aims This Botanical Briefing attempts to summarize what is currently known about the molecular bases of disease resistance in cereal species and suggests future research directions. • Scope An increasing number of resistance (R) genes have been isolated from rice, maize, wheat and barley that encode both structurally related and unique proteins. This R protein diversity may be attributable to the different modus operandi employed by pathogen species in some cases, but it is also a consequence of multiple defence strategies being employed against phytopathogens. Mutational analysis of barley has identified additional genes required for activation of an R gene-mediated defence response upon pathogen infection. In some instances very closely related barley R proteins require different proteins for defence activation, demonstrating that, within a single plant species, multiple resistance signalling pathways and different resistance strategies have evolved to confer protection against a single pathogen species. Despite the apparent diversity of cereal resistance mechanisms, some of the additional molecules required for R protein function are conserved amongst cereal and dicotyledonous species and even other eukaryotic species. Thus the derivation of functional homologues and interacting partner proteins from other species is contributing to the understanding of resistance signalling in cereals. The potential and limit of utilizing the rice genome sequence for further R gene isolation from cereal species is also considered, as are the new biotechnological possibilities for disease control arising from R gene isolation. • Conclusions Molecular analyses in cereals have further highlighted the complexity of plant–pathogen co-evolution and have shown that numerous active and passive defence strategies are employed by plants against phytopathogens. Many advances in understanding the molecular basis of disease resistance in cereals have focused on monogenic

  11. Compressed Genotyping

    PubMed Central

    Erlich, Yaniv; Gordon, Assaf; Brand, Michael; Hannon, Gregory J.; Mitra, Partha P.

    2011-01-01

    Over the past three decades we have steadily increased our knowledge on the genetic basis of many severe disorders. Nevertheless, there are still great challenges in applying this knowledge routinely in the clinic, mainly due to the relatively tedious and expensive process of genotyping. Since the genetic variations that underlie the disorders are relatively rare in the population, they can be thought of as a sparse signal. Using methods and ideas from compressed sensing and group testing, we have developed a cost-effective genotyping protocol to detect carriers for severe genetic disorders. In particular, we have adapted our scheme to a recently developed class of high throughput DNA sequencing technologies. The mathematical framework presented here has some important distinctions from the ’traditional’ compressed sensing and group testing frameworks in order to address biological and technical constraints of our setting. PMID:21451737

  12. Faecal bulking efficacy of Australasian breakfast cereals.

    PubMed

    Monro, John A

    2002-01-01

    Faecal bulk may play an important role in preventing a range of disorders of the large bowel, but as yet there is little information available on the relative faecal bulking capacities of various foods. Breakfast cereals are often promoted as a good source of potential bulk for 'inner health' because they provide dietary fibre, but their relative abilities to provide faecal bulk per se have not been described. The faecal bulking efficacy of 28 representative Australasian breakfast cereals was therefore measured. A rat model developed for the purpose, and shown to give similar responses as humans to cereal fibres, was used to measure faecal bulking efficacy as increases in fully hydrated faecal weight/100 g diet, based on precise measurements of food intake, faecal dry matter output and faecal water-holding capacity (g water held without stress/g faecal dry matter). Compared to a baseline diet containing 50% sucrose, increments in hydrated faecal weight due to 50% breakfast cereal ranged from slightly negative (Cornflakes, -2 g/100 g diet) to about 80 g/100 g diet (San Bran). Most breakfast cereals increased hydrated faecal weight by between 10 and 20 g/100 g diet from a baseline of 21 +/- 1.5 g/100 g diet, but four products containing high levels of wheat bran had an exceptionally large impact on hydrated faecal weight (increment > 20 g/100 g diet), and the changes resulted more from relative changes in dry matter output than in faecal water retention/gram. However, as faecal water retention was about 2.5 g water/g faecal dry matter on average, increases in dry matter represented large increases in faecal water load. Faecal bulking indices (FBI) for most of the breakfast cereals were less than 20 (wheat bran = 100). The content of wheat bran equivalents for faecal bulk (WBE(fb)) in the breakfast cereals was calculated from FBI. Most breakfast cereals contributed, per serve, less than 10% of a theoretical daily reference value for faecal bulk (DRV(fb) = 63 WBE

  13. Inertial pseudo star reference unit

    NASA Astrophysics Data System (ADS)

    Luniewicz, Michael F.; Woodbury, Dale T.; Gilmore, Jerold P.; Chien, Tze T.

    1994-05-01

    Advanced space systems for earth observation sensing and defense applications share a common objective: high-resolution monitoring. They require subsystems that accurately provide precise line-of-sight (LOS) pointing of the monitoring sensor with extreme jitter suppression and a precision attitude control system. To address this objective, Draper has developed a pointing system, the Inertial Pseudo Star Reference Unit (IPSRU). The IPSRU effort is a DARPA and SDI sponsored program at Draper under contract with the USAF Phillips Laboratory. The IPSRU implements a collimated light source mounted on a wide-band, extremely low-noise inertially stabilized platform. The collimated light beam becomes, in effect, a jitter-stabilized pseudo star. In addition, its direction in inertial space can be pointed at a precise rate by commands applied to the platform.

  14. Allelic variation at a single gene increases food value in a drought-tolerant staple cereal.

    PubMed

    Gilding, Edward K; Frère, Celine H; Cruickshank, Alan; Rada, Anna K; Prentis, Peter J; Mudge, Agnieszka M; Mace, Emma S; Jordan, David R; Godwin, Ian D

    2013-01-01

    The production of adequate agricultural outputs to support the growing human population places great demands on agriculture, especially in light of ever-greater restrictions on input resources. Sorghum is a drought-adapted cereal capable of reliable production where other cereals fail, and thus represents a good candidate to address food security as agricultural inputs of water and arable land grow scarce. A long-standing issue with sorghum grain is that it has an inherently lower digestibility. Here we show that a low-frequency allele type in the starch metabolic gene, pullulanase, is associated with increased digestibility, regardless of genotypic background. We also provide evidence that the beneficial allele type is not associated with deleterious pleiotropic effects in the modern field environment. We argue that increasing the digestibility of an adapted crop is a viable way forward towards addressing food security while maximizing water and land-use efficiency. PMID:23403584

  15. Genetic diversity in bread wheat (Triticum aestivum L.) genotypes.

    PubMed

    Degewione, A; Alamerew, S

    2013-11-01

    Wheat is one most important cereal crops grown in Ethiopia. Yet, keeping in view insufficient information on exotic bread wheat genotypes is limiting the access to useful traits present among the genotypes in the Somali region of Ethiopia. The aim of the study was to assess the extent of genetic diversity among bread wheat genotypes. Twenty six bread wheat (Triticum aestivum L.) genotypes obtained from ICARDA-CIMMYT were tested at Gode and Kelafo research sites at three cropping seasons (2009/10, 2010/11 and 2011/12) under irrigation. The experiment was conducted in randomized complete block design with three replications. Ten agronomic traits were included in the study. The mean values, ranges and the coefficient of variation of the 10 characters indicated the existence of sufficient variability among genotypes. Multivariate techniques were used to classify 26 bread wheat genotypes. Principal component analysis showed that the first six principal components explained about 91.87% of the total variation. D2 analysis showed the 26 bread wheat genotypes grouped into six clusters. This made to become moderate diversity among the genotypes. The crosses between genotypes selected from cluster-III with cluster-VI and cluster V with cluster VI are expected to produce better genetic recombination and segregation in their progenies. Therefore, these bread wheat genotypes need to be crossed and selected to develop high yielding pure line variety. PMID:24511742

  16. Genotyping methods.

    PubMed

    Tümmler, Burkhard

    2014-01-01

    Genotyping allows for the identification of bacterial isolates to the strain level and provides basic information about the evolutionary biology, population biology, taxonomy, ecology, and genetics of bacteria. Depending on the underlying question and available resources, Pseudomonas aeruginosa strains may be typed by anonymous fingerprinting techniques or electronically portable sequence-based typing methods such as multiple locus variable number tandem repeat (VNTR) analysis (MLVA), multilocus sequence typing, or oligonucleotide microarray. Macrorestriction fragment pattern analysis is a genotyping method that is globally applicable to all bacteria and hence has been and still is the reference method for strain typing in bacteriology. Agarose-embedded chromosomal DNA is cleaved with a rare-cutting restriction endonuclease and the generated 20-70 fragments are then separated by pulsed-field gel electrophoresis. The chapter provides a detailed step-by-step manual for SpeI genome fingerprinting of Pseudomonas chromosomes that has been optimized for SpeI fragment pattern analysis of P. aeruginosa. PMID:24818895

  17. Pseudo-hypertriglyceridaemia or hyperglycerolemia?

    PubMed

    Arrobas-Velilla, T; Mondéjar-García, R; Gómez-Gerique, J A; Cañizares Díaz, I; Cruz Mengibar, M C; Orive de Diego, A; Fabiani-Romero, F

    2013-01-01

    Hyperglycerolemia is a very rare genetic disorder caused by glycerol kinase deficiency. Although usually is presented unexpectedly in routine checks, there are severe forms, especially in children. In general, glycerol and glycerol kinase activity analyses are not included in routine laboratory determination. Glycerol presents positive interferences with some biochemical analytic techniques, e.g. in serum triglycerides and plasma ethylene glycol levels assays. Here, we report a Spanish patient with a pseudo-hypertriglyceridaemia, a falsely elevated triglycerides concentration that was not corrected with lipid-lowering therapy for 3 years. PMID:23877006

  18. Microwave Dielectric Properties of Cereal Grains

    Technology Transfer Automated Retrieval System (TEKTRAN)

    Dielectric properties of five cereal grains (wheat, corn, barley, oats, and grain sorghum) were 19 measured at 23 oC over broad microwave frequency range (5 GHz to 15 GHz) with a free-space-transmission 20 technique. Results of dielectric properties measurement are tabulated for each material for mo...

  19. Breakfast cereal sampling study for nutritional elements

    PubMed Central

    Wood, Laura J.; Lippa, Katrice A.; Phillips, Melissa M.; Rimmer, Catherine A.; Heckert, N. Alan; Leigh, Stefan D.; Moors, Amanda J.; Pugh, Rebecca S.; Rust, Lauren B.

    2013-01-01

    The National Institute of Standards and Technology (NIST) has established a Dietary Supplement Laboratory Quality Assurance Program (DSQAP) in collaboration with the National Institutes of Health Office of Dietary Supplements (NIH-ODS). The DSQAP invites laboratories twice annually to participate in interlaboratory studies where participants elect to measure concentrations of nutritional and/or toxic elements as well as active and/or marker compounds. One of these studies was designed to determine the effects of material granularity and sample processing techniques on measurement variability (precision) as well as to provide participating laboratories information on their performance relative to the NIST assigned values (bias) and to the other participants (concordance). Participants were asked to determine the mass fractions of Ca, Fe, and Zn, in mg/kg, in six breakfast cereal samples. Cereal samples consisted of three ground materials (homogenized wheat, wheat, and rice), two flake materials (wheat and rice) and a partially crushed material (a wheat/rice mixture). In general, approximately 25 % of the laboratories processed and analyzed the suite of six cereal materials with adequate to exemplary measurement precision. Over half of the laboratories (60 %) experienced measurement issues related to only a particular type of cereal matrix or for only a single element. A small number (15 %) of laboratories experienced significant sample processing or measurement problems. Future studies planned by the DSQAP may be designed to use commercial products to aid laboratories with their sampling and analytical techniques. PMID:23380950

  20. Mineral Analysis of Whole Grain Total Cereal

    ERIC Educational Resources Information Center

    Hooker, Paul

    2005-01-01

    The quantitative analysis of elemental iron in Whole Grain Total Cereal using visible spectroscopy is suitable for a general chemistry course for science or nonscience majors. The more extensive mineral analysis, specifically for the elements iron, calcium and zinc, is suitable for an instrumental or quantitative analysis chemistry course.

  1. Cereal Box Design: An Interdisciplinary Graphics Activity

    ERIC Educational Resources Information Center

    Fitzgerald, Mike; Tsosie, Teri

    2012-01-01

    The cereal box design activity is intriguing both for its simplicity and the resourcefulness that it can generate in young people. Also, it lends itself to a variety of curriculums. It covers both consumerism and Design for the Environment (DfE) concepts broadly and in depth. The activity introduces a wide range of topics. They include graphic…

  2. Pseudo force acting between bodies

    NASA Astrophysics Data System (ADS)

    Baruah, Abhinav Ray; Deva, Anish; Sarma, Arun

    It has been shown that a non-contact force acts between two macroscopic physical objects held close together, which is not associated with the gravitational and electrostatic force. An experiment was conducted with objects of different mass, material and geometry to find the magnitude and properties of this apparent or pseudo force. The order of magnitude was found to be 10-5 and it remained constant for all types of objects while only the coefficient increased as the distance between the objects reduced. It only started acting at small distances and failed to make a body move if it experienced static friction from any contact surface. The nature of the force was found to be attractive as well as repulsive. Due to gravitation being a solely attractive force, it was eliminated as a possible reason for the pseudo force. The experiment was performed twice, once by grounding the apparatus and then again without grounding. The order of the force remained the same for both cases. As the test objects were held by hand, they were grounded through the human body. Also, none of the objects used were in contact with each other for the duration of this work, preventing any contact electrification. Due to these factors, the force was not considered electrostatic in nature.

  3. Acroangiodermatitis (Pseudo-Kaposi sarcoma)

    PubMed Central

    Singh, Satyendra Kumar; Manchanda, Kajal

    2014-01-01

    Acroangiodermatitis or Pseudo-Kaposi sarcoma is a rare angioproliferative entity, related to chronic venous insufficiency or certain other vascular anomalies. It is often associated with chronic venous insufficiency, arteriovenous malformation of the legs, chronic renal failure treated with dialysis, paralyzed legs and amputation stumps. We hereby describe a case of 45 year old female presenting with pitting pedal edema, multiple ulcers over bilateral lower limbs with irregular margins with erythema and hyperpigmentation of the surrounding skin. Color Doppler study of bilateral lower limbs was normal. Histopathological examination from one of the lesions showed hyperplastic epidermis, proliferation of capillaries in dermis, hemosiderin deposits and lymphocytic infiltrate. These features thus confirmed the diagnosis of Acroangiodermatitis. PMID:25165656

  4. Chronic Intestinal Pseudo-Obstruction.

    PubMed

    Panganamamula, Kashyap V; Parkman, Henry P

    2005-02-01

    Chronic intestinal pseudo-obstruction (CIP) is a gastrointestinal motility disorder characterized by chronic symptoms and signs of bowel obstruction in the absence of a fixed, lumen-occluding lesion. Radiographic findings consist of dilated bowel with air-fluid levels. Pseudo-obstruction is an uncommon condition and can result from primary or secondary causes. The management is primarily focused on symptom control and nutritional support to prevent weight loss and malnutrition. The principles of management of patients with CIP involve 1) establishing a correct clinical diagnosis and excluding mechanical obstruction; 2) differentiating between idiopathic and secondary forms; 3) performing a symptomatic and physiologic assessment of the parts of the gastrointestinal (GI) tract involved by manometric and whole gut transit scintigraphic studies; 4) careful assessment of nutritional status of the patient; and 5) developing a therapeutic plan addressing the patient's symptoms and nutritional status. Treatment of CIP includes frequent small meals with a low-fat, low-fiber diet, liquid nutritional supplements may be needed; prokinetic agents such as metoclopramide may help to reduce upper GI symptoms. Trials of drugs such as erythromycin, domperidone, cisapride, and tegaserod may be considered if there is no response. Subcutaneous octreotide may be helpful to improve small bowel dysmotility especially in patients with scleroderma. In patients with symptoms suggestive of bacterial overgrowth, courses of antibiotics such as metronidazole, ciprofloxacin, and doxycycline may be needed. Nutritional assessment and support is an important aspect of management. Enteral nutrition is usually preferred. In carefully selected patients, feeding jejunostomy with or without decompression gastrostomy may be tried. Long term parenteral nutrition should be reserved for patients who can not tolerate enteral nutrition. Complications associated with total parenteral nutrition include

  5. Molecular Approaches to Understand Nutritional Potential of Coarse Cereals.

    PubMed

    Singh, Amit Kumar; Singh, Rakesh; Subramani, Rajkumar; Kumar, Rajesh; Wankhede, Dhammaprakash P

    2016-06-01

    Coarse grains are important group of crops that constitutes staple food for large population residing primarily in the arid and semi-arid regions of the world. Coarse grains are designated as nutri-cereals as they are rich in essential amino acids, minerals and vitamins. In spite of having several nutritional virtues in coarse grain as mentioned above, there is still scope for improvement in quality parameters such as cooking qualities, modulation of nutritional constituents and reduction or elimination of anti-nutritional factors. Besides its use in traditional cooking, coarse grains have been used mainly in the weaning food preparation and other malted food production. Improvement in quality parameters will certainly increase consumer's preference for coarse grains and increase their demand. The overall genetic gain in quality traits of economic importance in the cultivated varieties will enhance their industrial value and simultaneously increase income of farmers growing these varieties. The urgent step for improvement of quality traits in coarse grains requires a detailed understanding of molecular mechanisms responsible for varied level of different nutritional contents in different genotypes of these crops. In this review we have discussed the progresses made in understanding of coarse grain biology with various omics tool coupled with modern breeding approaches and the current status with regard to our effort towards dissecting traits related to improvement of quality and nutritional constituents of grains. PMID:27252585

  6. Fumonisins, Trichothecenes and Zearalenone in Cereals

    PubMed Central

    Yazar, Selma; Omurtag, Gülden Z.

    2008-01-01

    Fumonisins are phytotoxic mycotoxins which are synthesized by various species of the fungal genus Fusarium such as Fusarium verticillioides (Sacc.) Nirenberg (ex F.moniliforme Sheldon) and Fusarium proliferatum. The trichothecene (TC) mycotoxins are secondary metabolites produce by species that belong to several fungal genera, especially Fusarium, Stachybotrys, Trichothecium, Trichoderma, Memnoniella and Myrothecium. Fusarium mycotoxins are widely dispersed in cereals and their products. Zearalenone (ZEA) is an estrogenic compound produced by Fusarium spp. such as F. graminearum and F. culmorum. Fumonisins, the TCs and ZEA are hazardous for human and animal health. Contamination with TCs causes a number of illnesses in human and animal such as decrease in food consumption (anorexia), depression or inhibition on immune system function and haematoxicity. The purpose of this paper is to give a review of the papers published on the field of fumonisin, TC and ZEA mycotoxins in cereals consumed in the world. PMID:19330061

  7. Determination of phosphorus in cereal lipids.

    PubMed

    Kovacs, M I

    1986-05-01

    The effect of digestion methods on the determination of phosphorus in cereal lipids was reinvestigated. Samples were either digested with sulfuric acid or ashed in a muffle furnace at 600 degrees C. The standard deviation and the coefficient of variation were significantly higher for the acid-digested samples. Ashing gave more reliable results, especially when large amounts of lipid material had to be oxidized. PMID:3728960

  8. Nutritional quality of Australian breakfast cereals. Are they improving?

    PubMed

    Louie, Jimmy Chun Yu; Dunford, Elizabeth K; Walker, Karen Z; Gill, Timothy P

    2012-10-01

    The nutritional quality of Australian breakfast cereals is not systematically monitored despite the importance of breakfast for general health. We examined whether the nutritional quality of Australian breakfast cereals has improved between 2004 and 2010, and whether any change could be detected after the introduction of Daily Intake Guide (DIG) front-of-pack labelling. Supermarket surveys were conducted in 2004 and 2010 using the same methodology to collect information from the nutrition information panels of Australian breakfast cereals and the nutrient content of cereals was compared by year. Breakfast cereals with and without DIG labelling in 2010 were also compared. Nutritional quality was assessed using UK Traffic Light criteria. No significant difference was detected in nutritional composition of breakfast cereals between 2004 and 2010. There was no notable improvement in nutritional composition of breakfast cereals marketed as the same product in both years. Overall there has been little improvement in the nutritional quality of Australian breakfast cereals in the 6 year period. A large proportion of Australian breakfast cereals were considered high sugar. In conclusion, the introduction of DIG labelling does not appear to have promoted product reformulation, and breakfast cereals carrying DIG labels were not consistently healthier. PMID:22728950

  9. Therapeutic Effect of Cereal Grains: A Review.

    PubMed

    Singhal, Poonam; Kaushik, Geetanjali

    2016-04-01

    Over the last few decades, life style changes have resulted in drastic increase in the incidence of diabetes all over the world, especially in the developing countries. Oral hypoglycemic agents and insulin form the main stay in controlling diabetes but they have prominent side effects and fail to significantly alter the course of diabetic complications. Appropriate diet and exercise programs that form a part of lifestyle modifications have proven to be greatly effective in the management of this disease. Dietary therapy is showing a bright future in the prevention and treatment of diabetes. Cereal grains which form the staple diet for humans in most of the countries are increasingly being used to treat diabetes and other associated disorders in view of their anti-diabetic and anti-lipidemic potential. Given this background, this paper reviews the possible mechanisms of lowering blood sugar and cholesterol levels possessed by various commonly consumed cereal grains. It is concluded that cereal grains are not only the potential sources of energy but also possess the therapeutic role in preventing metabolic disorders and decreasing the risk factors for cardiovascular and renal diseases. PMID:25746052

  10. Genetic transformation of major cereal crops.

    PubMed

    Ji, Qing; Xu, Xing; Wang, Kan

    2013-01-01

    Of the more than 50,000 edible plant species in the world, at least 10,000 species are cereal grains. Three major cereal crops, rice (Oryza sativa), maize (Zea mays), and wheat (Triticum sp.), provide two-thirds of the world's food energy intake. Although crop yields have improved tremendously thanks to technological advances in the past 50 years, population increases and climate changes continue to threaten the sustainability of current crop productions. Whereas conventional and marker-assisted breeding programs continue to play a major role in crop improvement, genetic engineering has drawn an intense worldwide interest from the scientific community. In the past decade, genetic transformation technologies have revolutionized agricultural practices and millions of hectares of biotech crops have been cultured. Because of its unique ability to insert well-characterized gene sequences into the plant genome, genetic engineering can also provide effective tools to address fundamental biological questions. This technology is expected to continue to be an indispensable approach for both basic and applied research. Here, we overview briefly the development of the genetic transformation in the top seven cereals, namely maize, rice, wheat, barley (Hordeum vulgare), sorghum (Sorghum sp.), oat (Avena sativa), and millets. The advantages and disadvantages of the two major transformation methods, Agrobacterium tumefaciens-mediated and biolistic methods, are also discussed. PMID:24166432

  11. Evolutionary ecology of the wild cereals

    SciTech Connect

    Blumler, M.A.

    1995-12-31

    The evolutionary ecology of the Near Eastern wild cereal grasses sheds light on the environmental conditions under which the Neolithic Revolution took place. Globally, as well as in the Near East, the annual habit, large seed size, and seasonal drought are associated with each other and with agricultural origins. The connection with agricultural appears to involve ease of cultivation and necessity for seasonal storage rather than hunter-gatherer preference for large seeds. The Near Eastern wild cereal species separate ecologically according to seasonality of precipitation, primarily, though there may also be minor differences in temperature and edaphic tolerances. This reflects the evolution, over the course of the Quaternary, of species with increased seed size in response to increasingly pronounced seasonal drought. Wild emmer and wild barley, the progenitors of perhaps the very first domesticates, are evolutionary monstrosities that represent the culmination of this trend. The possibly complex changes in seasonality, aridity, and atmospheric CO2 during the millenia leading up to the Neolithic should have produced equally complex, but to some extent predictable, changes in the abundance and distribution of the different wild cereal species.

  12. Cereal Production Ratio and NDVI in Spain

    NASA Astrophysics Data System (ADS)

    Saa-Requejo, Antonio; Recuero, Laura; Palacios, Alicia; Díaz-Ambrona, Carlos G. H.; Tarquis, Ana M.

    2014-05-01

    Droughts are long-term phenomena affecting large regions causing significant damages both in human lives and economic losses. The use of remote sensing has proved to be very important in monitoring the growth of agricultural crops and trying to asses weather impact on crop loss. Several indices has been developed based in remote sensing data being one of them the normalized difference vegetation index (NDVI). In this study we have focus to know the correlation between NDVI data and the looses of rain fed cereal in the Spanish area where this crop is majority. For this propose data from drought damage in cereal come from the pool of agricultural insurance in Spain (AGROSEGURO) including 2007/2008 to 2011/2012 (five agricultural campaigns). This data is given as a ratio between drought party claims against the insured value of production aggregated at the agrarian region level. Medium resolution (500x500 m2) MODIS images were used during the same campaigns to estimate the eight-day composites NDVI at these locations. The NDVI values are accumulated following the normal cycle of the cereal taking in account the sowing date at different sites. At the same time, CORINE Land Cover (2006) was used to classify the pixels belonging to rain fed cereal use including a set of conditions such as pixels showing dry during summer, area in which there has been no change of use. Fallow presence is studied with particular attention as it imposes an inter annual variation between crop and bare soil and causes decreases in greenness in a pixel and mix both situations. This is more complex in the situation in which the avoid fallow and a continuous monoculture is performed. The results shown that around 40% of the area is subject to the regime of fallow while 60% have growing every year. In addition, another variation is detected if the year is humid (decrease of fallow) or dry (increase of fallow). The level of correlation between the drought damage ratios and cumulative NDVI for the

  13. In vitro analysis of zinc solubility in breakfast cereals

    SciTech Connect

    Woodhouse, L.R.; Carlson, M.S.; King, J.C. )

    1991-03-15

    Breakfast cereals are often fortified with zinc (Zn), as well as other minerals. The purpose of this study was to determine to what extent the grain matrix of the cereal affects the solubility of the Zn. Ten whole or mixed-grain cereals were analyzed for Zn content by AAS, and Zn solubility was assessed by an in vitro digestion method. Cereals used were fortified with Zn to 100% US RDA, 25% US RDA, and non-fortified . An in vitro digestion method was developed using pepsin and pancreatin, followed by a filtration step, in order to determine the percent of Zn released from the matrix, defined as Zn solubility. The 100% fortified cereals yielded 19-35% soluble Zn, the 25% fortified cereals yielded 6-25% soluble Zn, and the non-fortified cereals yielded 0-17% soluble Zn. Those fortified cereals containing corn, rice, oat, or wheat as the primary ingredient showed decreasing Zn solubility values of 31-35%, 25%, 23%, and 6-20%, respectively. Theoretically, only the soluble Zn would be available for absorption, suggesting that these results may give a rough estimation of Zn bioavailability. In general, a 100% Zn-may give a rough estimation of Zn bioavailability. In general, a 100% Zn-fortified cereal will provide more available Zn than a 25% or non-fortified cereal, and the extent of availability depends in part on the grain matrix of the cereal. Those Zn-fortified cereals containing grains other than wheat may provide a more absorbable Zn source.

  14. Lunasin in cereal seeds: What is the origin?

    PubMed

    Mitchell, Rowan A C; Lovegrove, Alison; Shewry, Peter R

    2013-05-01

    Lunasin is a peptide from soybean seeds which has been demonstrated to have anticancer properties. It has also been reported in cereal seeds: wheat, rye, barley and Triticale. However, extensive searches of transcriptome and DNA sequence databases for wheat and other cereals have failed to identify sequences encoding either the lunasin peptide or a precursor protein. This raises the question of the origin of the lunasin reported in cereal grain. PMID:24817784

  15. Tube surfaces in pseudo-Galilean space

    NASA Astrophysics Data System (ADS)

    Dede, Mustafa

    2016-03-01

    In this paper, we introduce the tube surfaces in pseudo-Galilean 3-space. We classify the tube surfaces into two types according to the spine curve which generates the tube surface in pseudo-Galilean space. Moreover, we show that both types of tube surfaces are spacelike surfaces. Then, we begin to study the local geometry of the tube surfaces. We obtain the first and second fundamental forms of the tube surfaces. In addition, we investigate the Gauss and mean curvatures of the tube surfaces in pseudo-Galilean space.

  16. Oxidative Metabolism of Rye (Secale cereale L.) after Short Term Exposure to Aluminum: Uncovering the Glutathione-Ascorbate Redox Network.

    PubMed

    de Sousa, Alexandra; AbdElgawad, Hamada; Han, Asard; Teixeira, Jorge; Matos, Manuela; Fidalgo, Fernanda

    2016-01-01

    One of the major limitations to plant growth and yield in acidic soils is the prevalence of soluble aluminum ions (Al(3+)) in the soil solution, which can irreversible damage the root apex cells. Nonetheless, many Al-tolerant species overcome Al toxicity and are well-adapted to acidic soils, being able to complete their life cycle under such stressful conditions. At this point, the complex physiological and biochemical processes inherent to Al tolerance remain unclear, especially in what concerns the behavior of antioxidant enzymes and stress indicators at early plant development. Since rye (Secale cereale L.), is considered the most Al-tolerant cereal, in this study we resort to seedlings of two genotypes with different Al sensitivities in order to evaluate their oxidative metabolism after short term Al exposure. Al-induced toxicity and antioxidant responses were dependent on rye genotype, organ and exposure period. Al affected biomass production and membrane integrity in roots and leaves of the sensitive (RioDeva) genotype. Catalase was the primary enzyme involved in H2O2 detoxification in the tolerant (Beira) genotype, while in RioDeva this task was mainly performed by GPX and POX. Evaluation of the enzymatic and non-enzymatic components of the ascorbate-glutathione cycle, as well the oxalate content, revealed that Beira genotype coped with Al stress by converting DHA into oxalate and tartarate, which posteriorly may bind to Al forming non-toxic chelates. In contrast, RioDeva genotype used a much more ineffective strategy which passed through ascorbate regeneration. So, remarkable differences between MDHAR and DHAR activities appear to be the key for a higher Al tolerance. PMID:27252711

  17. Oxidative Metabolism of Rye (Secale cereale L.) after Short Term Exposure to Aluminum: Uncovering the Glutathione–Ascorbate Redox Network

    PubMed Central

    de Sousa, Alexandra; AbdElgawad, Hamada; Han, Asard; Teixeira, Jorge; Matos, Manuela; Fidalgo, Fernanda

    2016-01-01

    One of the major limitations to plant growth and yield in acidic soils is the prevalence of soluble aluminum ions (Al3+) in the soil solution, which can irreversible damage the root apex cells. Nonetheless, many Al-tolerant species overcome Al toxicity and are well-adapted to acidic soils, being able to complete their life cycle under such stressful conditions. At this point, the complex physiological and biochemical processes inherent to Al tolerance remain unclear, especially in what concerns the behavior of antioxidant enzymes and stress indicators at early plant development. Since rye (Secale cereale L.), is considered the most Al-tolerant cereal, in this study we resort to seedlings of two genotypes with different Al sensitivities in order to evaluate their oxidative metabolism after short term Al exposure. Al-induced toxicity and antioxidant responses were dependent on rye genotype, organ and exposure period. Al affected biomass production and membrane integrity in roots and leaves of the sensitive (RioDeva) genotype. Catalase was the primary enzyme involved in H2O2 detoxification in the tolerant (Beira) genotype, while in RioDeva this task was mainly performed by GPX and POX. Evaluation of the enzymatic and non-enzymatic components of the ascorbate–glutathione cycle, as well the oxalate content, revealed that Beira genotype coped with Al stress by converting DHA into oxalate and tartarate, which posteriorly may bind to Al forming non-toxic chelates. In contrast, RioDeva genotype used a much more ineffective strategy which passed through ascorbate regeneration. So, remarkable differences between MDHAR and DHAR activities appear to be the key for a higher Al tolerance. PMID:27252711

  18. Concern over ready-to-eat breakfast cereals

    Technology Transfer Automated Retrieval System (TEKTRAN)

    The Research and Professional Brief published in the April 2008 issue of the Journal entitled "Examining the Nutritional Quality of Breakfast Cereals Marketed to Children" (1) is of concern. The authors concluded that the "the majority of children's cereals failed to meet national nutrition standard...

  19. Note: A device for the preperation of cereal endosperm bricks.

    Technology Transfer Automated Retrieval System (TEKTRAN)

    The study of cereal chemistry has been advanced by the analysis of the material properties of cereal endosperm. In particular, the study of wheat (Triticum sp. L.) endosperm hardness (kernel texture) has been a topic of intense interest for the past ca. 100 years (Pomeranz and Williams 1990, Morris...

  20. Prizes in Cereal Boxes: An Application of Probability.

    ERIC Educational Resources Information Center

    Litwiller, Bonnie H.; Duncan, David R.

    1992-01-01

    Presents four cases of real-world probabilistic situations to promote more effective teaching of probability. Calculates the probability of obtaining six of six different prizes successively in six, seven, eight, and nine boxes of cereal, generalizes the problem to n boxes of cereal, and offers suggestions to extend the problem. (MDH)

  1. Resistant and susceptible responses of cereal hosts to aphid feeding

    Technology Transfer Automated Retrieval System (TEKTRAN)

    Although cereal host resistance to aphids has been examined extensively, little information is available on etiology of aphid injury and biochemical responses of resistant and susceptible cereal hosts to aphid feeding. Our team examined both aphid and plant factors for the Russian wheat aphid (RWA)...

  2. Parallel domestication of the heading date 1 gene in cereals

    Technology Transfer Automated Retrieval System (TEKTRAN)

    Flowering time is one of the key determinants of crop adaptation to local environments during domestication. However, the genetic basis underlying flowering time is yet to be elucidated in most cereals. Although staple cereals, such as rice, maize, wheat, barley and sorghum, have spread and adapted ...

  3. Grain-Quality attributes for cereals other than wheat

    Technology Transfer Automated Retrieval System (TEKTRAN)

    Cereals are grass species that are the primary source of food for humankind and important source of animal feed. Energy in the form of starch is their leading contribution but they are also important sources of protein, lipid, vitamins and minerals. Cereal grains are all processed to varying degrees...

  4. Surface, Interfacial and Tribological Properties of Cereal-based Amphiphiles

    Technology Transfer Automated Retrieval System (TEKTRAN)

    Starch, protein and oil are the major components of most cereals such as corn and soybean. These components, with or without further chemical modification, display a number of important amphiphilic characteristics that are of interest in a number of applications. Cereal-based oils have polar compo...

  5. Family Income, TV Viewing, and Children's Cereal Ratings.

    ERIC Educational Resources Information Center

    Reid, Leonard N.; And Others

    1980-01-01

    A survey of 148 children revealed that although the majority of children from both low-income and moderate-to-high income backgrounds understood the selling intent of television commercials for cereals, there were significant differences between income groups in children's ability to evaluate the nutritional value of heavily advertised cereals.…

  6. Engineering Value-Added Traits in Cereal Crops

    Technology Transfer Automated Retrieval System (TEKTRAN)

    Cereal crops – chiefly wheat, rice, maize, sorghum, and pearl millet – are the main food source for more than two-thirds of the world population. Conventional breeding is mainly responsible for the genetic improvement of cereal crops and has resulted in cultivars with superior agronomic traits. Ho...

  7. Fall Growth Potential of Cereal-Grain Forages

    Technology Transfer Automated Retrieval System (TEKTRAN)

    In Arkansas, producers utilizing cereal grains as fall forage for weaned calves usually do not produce a grain crop the following summer. Our objectives were to evaluate eight diverse varieties of wheat (Triticum aestivum L.), oat (Avena sativa L.), rye (Secale cereale L.), and triticale (X Triticos...

  8. Cereals: Overview of uses: accent on wheat grain

    Technology Transfer Automated Retrieval System (TEKTRAN)

    Cereals are grass species that are the primary source of food for humankind. Energy in the form of starch is their leading contribution but they are also important sources of protein, lipid, vitamins and minerals. Cereal grains are all processed to varying degrees, and made into a limitless array of...

  9. Composition of Cereal Crop Residue in Dryland Cropping Systems

    Technology Transfer Automated Retrieval System (TEKTRAN)

    Cereal crops and cultivars vary in their composition, and also in their decomposition and contribution to soil organic matter. Large quantities of cereal crop residue that decompose slowly present an obstacle to the adoption of minimum till or no-till seeding, conversely lower quantities of crop re...

  10. Progress of cereal transformation technology mediated by Agrobacterium tumefaciens

    PubMed Central

    Hiei, Yukoh; Ishida, Yuji; Komari, Toshihiko

    2014-01-01

    Monocotyledonous plants were believed to be not transformable by the soil bacterium Agrobacterium tumefaciens until two decades ago, although convenient protocols for infection of leaf disks and subsequent regeneration of transgenic plants had been well established in a number of dicotyledonous species by then. This belief was reinforced by the fact that monocotyledons are mostly outside the host range of crown gall disease caused by the bacterium and by the failures in trials in monocotyledons to mimic the transformation protocols for dicotyledons. However, a key reason for the failure could have been the lack of active cell divisions at the wound sites in monocotyledons. The complexity and narrow optimal windows of critical factors, such as genotypes of plants, conditions of the plants from which explants are prepared, tissue culture methods and culture media, pre-treatments of explants, strains of A. tumefaciens, inducers of virulence genes, transformation vectors, selection marker genes and selective agents, kept technical hurdles high. Eventually it was demonstrated that rice and maize could be transformed by co-cultivating cells of callus cultures or immature embryos, which are actively dividing or about to divide, with A. tumefaciens. Subsequently, these initial difficulties were resolved one by one by many research groups, and the major cereals are now transformed quite efficiently. As many as 15 independent transgenic events may be regenerated from a single piece of immature embryo of rice. Maize transformation protocols are well established, and almost all transgenic events deregulated for commercialization after 2003 were generated by Agrobacterium-mediated transformation. Wheat, barley, and sorghum are also among those plants that can be efficiently transformed by A. tumefaciens. PMID:25426132

  11. THE PSEUDO-EVOLUTION OF HALO MASS

    SciTech Connect

    Diemer, Benedikt; Kravtsov, Andrey V.; More, Surhud

    2013-03-20

    A dark matter halo is commonly defined as a spherical overdensity of matter with respect to a reference density, such as the critical density or the mean matter density of the universe. Such definitions can lead to a spurious pseudo-evolution of halo mass simply due to redshift evolution of the reference density, even if its physical density profile remains constant over time. We estimate the amount of such pseudo-evolution of mass between z = 1 and 0 for halos identified in a large N-body simulation, and show that it accounts for almost the entire mass evolution of the majority of halos with M{sub 200{rho}-bar} Less-Than-Or-Equivalent-To 10{sup 12} h{sup -1} M{sub Sun} and can be a significant fraction of the apparent mass growth even for cluster-sized halos. We estimate the magnitude of the pseudo-evolution assuming that halo density profiles remain static in physical coordinates, and show that this simple model predicts the pseudo-evolution of halos identified in numerical simulations to good accuracy, albeit with significant scatter. We discuss the impact of pseudo-evolution on the evolution of the halo mass function and show that the non-evolution of the low-mass end of the halo mass function is the result of a fortuitous cancellation between pseudo-evolution and the absorption of small halos into larger hosts. We also show that the evolution of the low-mass end of the concentration-mass relation observed in simulations is almost entirely due to the pseudo-evolution of mass. Finally, we discuss the implications of our results for the interpretation of the evolution of various scaling relations between the observable properties of galaxies and galaxy clusters and their halo masses.

  12. Maintaining heterokaryosis in pseudo-homothallic fungi.

    PubMed

    Grognet, Pierre; Silar, Philippe

    2015-01-01

    Among all the strategies displayed by fungi to reproduce and propagate, some species have adopted a peculiar behavior called pseudo-homothallism. Pseudo-homothallic fungi are true heterothallics, i.e., they need 2 genetically-compatible partners to mate, but they produce self-fertile mycelium in which the 2 different nuclei carrying the compatible mating types are present. This lifestyle not only enables the fungus to reproduce without finding a compatible partner, but also to cross with any mate it may encounter. However, to be fully functional, pseudo-homothallism requires maintaining heterokaryosis at every stage of the life cycle. We recently showed that neither the structure of the mating-type locus nor hybrid-enhancing effect due to the presence of the 2 mating types accounts for the maintenance of heterokaryosis in the pseudo-homothallic fungus P. anserina. In this addendum, we summarize the mechanisms creating heterokaryosis in P. anserina and 2 other well-known pseudo-homothallic fungi, Neurospora tetrasperma and Agaricus bisporus. We also discuss mechanisms potentially involved in maintaining heterokaryosis in these 3 species. PMID:26479494

  13. SEARCHING FOR LOW WEIGHT PSEUDO-CODEWORDS

    SciTech Connect

    CHERTKOV, MICHAEL; STEPANOV, MIKHAIL

    2007-01-23

    Belief Propagation (BP) and Linear Programming (LP) decodings of LDPC codes are discussed. The authors summarize results of instanton/pseudo-codeword approach developed for analysis of the error-floor domain of the codes. Instantons are special, code and decoding specific, configurations of the channel noise contributing most to the Frame-Error-Rate (FER). Instantons are decoded into pseudo-codewords. Instanton/pseudo-codeword with the lowest weight describes the largest Signal-to-Noise-Ratio (SNR) asymptotic of FER, while the whole spectra of the low weight instantons is descriptive of the FER vs. SNR profile in the extended error-floor domain. First, they describe a general optimization method that allows to find the instantons for any coding/decoding. Second, they introduce LP-specific pseudo-codeword search algorithm that allows efficient calculations of the pseudo-codeword spectra. Finally, they discuss results of combined BP/LP error-floor exploration experiments for two mode codes.

  14. Pseudo-capacitor device for aqueous electrolytes

    DOEpatents

    Prakash, J.; Thackeray, M.M.; Dees, D.W.; Vissers, D.R.; Myles, K.M.

    1998-11-24

    A pseudo-capacitor having a high energy storage capacity develops a double layer capacitance as well as a Faradaic or battery-like redox reaction, also referred to as pseudo-capacitance. The Faradaic reaction gives rise to a capacitance much greater than that of the typical ruthenate oxide ultracapacitor which develops only charge separation-based double layer capacitance. The capacitor employs a lead and/or bismuth/ruthenate and/or iridium system having the formula A{sub 2}[B{sub 2{minus}x}Pb{sub x}]O{sub 7{minus}y}, where A=Pb, Bi, and B=Ru, Ir, and Opseudo-capacitance, affords high energy/power density in the pseudo-capacitor. The amount of expensive ruthenate and iridium can be substantially reduced in the pseudo-capacitor by increasing the lead content while improving energy storage capacity. 8 figs.

  15. Pseudo-capacitor device for aqueous electrolytes

    DOEpatents

    Prakash, Jai; Thackeray, Michael M.; Dees, Dennis W.; Vissers, Donald R.; Myles, Kevin M.

    1998-01-01

    A pseudo-capacitor having a high energy storage capacity develops a double layer capacitance as well as a Faradaic or battery-like redox reaction, also referred to as pseudo-capacitance. The Faradaic reaction gives rise to a capacitance much greater than that of the typical ruthenate oxide ultracapacitor which develops only charge separation-based double layer capacitance. The capacitor employs a lead and/or bismuth/ruthenate and/or iridium system having the formula A.sub.2 ›B.sub.2-x Pb.sub.x !O.sub.7-y, where A=Pb, Bi, and B=Ru, Ir, and Opseudo-capacitance, affords high energy/power density in the pseudo-capacitor. The amount of expensive ruthenate and iridium can be substantially reduced in the pseudo-capacitor by increasing the lead content while improving energy storage capacity.

  16. Optimal root arrangement of cereal crops

    NASA Astrophysics Data System (ADS)

    Jung, Yeonsu; Park, Keunhwan; Kim, Ho-Young

    2015-11-01

    The plant root absorbs water from the soil and supplies it to the rest part of the plant. It consists of a number of root fibers, through whose surfaces water uptake occurs. There is an intriguing observation that for most of cereal crops such as maize and wheat, the volume density of root in the soil declines exponentially as a function of depth. To understand this empirical finding, we construct a theoretical model of root water uptake, where mass transfer into root surface is modeled just as heat flux around a fin. Agreement between the theoretically predicted optimal root distribution in vertical direction and biological data supports the hypothesis that the plant root has evolved to achieve the optimal water uptake in competition with neighbors. This study has practical implication in the agricultural industry as well as optimal design of water transport networks in both micro- and macroscales. Department of Mechanical and Aerospace Engineering, Seoul National University, Seoul 08826, Korea.

  17. Cytomixis in the cereal (Gramineae) microsporogenesis.

    PubMed

    Sidorchuk, Yuri V; Novikovskaya, Anna A; Deineko, Elena V

    2016-03-01

    The specific features in behavior of the nuclei and chromatin migrating through cytomictic channels as well as in formation of micronuclei in the cereal microsporogenesis have been studied. Immunofluorescence microscopy has allowed for demonstration that the tubulin cytoskeleton does not play a significant role in the intercellular migration of nuclei. Potential involvement of the actin cytoskeleton and SUN-KASH linker complexes in cytomixis is discussed. Comparative analysis of the published and own data suggests that the cytological patterns of cytomixis in monocots and dicots are conserved. As has been shown, each higher ploidy level in the polyploid series of the family Gramineae is accompanied by an increase in the rate of cytomixis independently of individual species. The results confirm the assumption on a correlation between the rate of cytomixis, ploidy level, and genome balance. PMID:25860793

  18. Changes of paramagnetic species in cereal grains upon short-term ozone action as a marker of oxidative stress tolerance.

    PubMed

    Łabanowska, Maria; Kurdziel, Magdalena; Filek, Maria

    2016-01-15

    The increase of the concentration of ozone in the atmosphere, being the direct source of reactive oxygen species, results in the yield loss of agronomic crops. On the other hand, ozone is also used as a protector against microorganisms, living in plants and present in materials obtained from them, dangerous for human and animal health. In this work it has been studied if ozone in doses similar to those used for removal of microorganisms can have significant influence on the generation of stable organic radicals and changes in the character of transition metal ions and in the antioxidative biochemical parameters of cereal grains. The aim of this work was to find if the response of grains of three cereals (wheat, oat and barley) to ozone depended on their oxidative stress tolerance. The influence of direct short-term ozone application on grains of these cereals, each represented by two genotypes with different oxidative stress tolerance, was studied by biochemical analyses and by electron paramagnetic resonance (EPR) technique. Whole grains as well as their parts: embryo, endosperm and seed coat were subjected to ozone treatment for 30 min. Biochemical investigation of control samples showed that their antioxidant activity increased in order: wheatcereal, stress tolerance of particular genotype and the part of grain. The control samples of whole grains and their parts originating from sensitive genotypes contained higher amounts of stable organic radicals (semiquinone, phenoxyl and carbohydrate types) than those from tolerant ones. In embryos of grains from sensitive genotypes their amount increased upon ozone treatment stronger than in embryos from grains of tolerant cultivars. In seed coats and endosperms such relation was not found and the changes in

  19. Fisher exponent from pseudo-ε expansion.

    PubMed

    Sokolov, A I; Nikitina, M A

    2014-07-01

    The critical exponent η for three-dimensional systems with an n-vector order parameter is evaluated in the framework of the pseudo-ε expansion approach. The pseudo-ε expansion (τ series) for η found up to the τ(7) term for n = 0, 1, 2, 3 and within the τ(6) order for general n is shown to have a structure that is rather favorable for getting numerical estimates. The use of Padé approximants and direct summation of the τ series result in iteration procedures rapidly converging to the asymptotic values that are very close to the most reliable numerical estimates of η known today. The origin of such an efficiency is discussed and shown to lie in the general properties of the pseudo-ε expansion machinery interfering with some peculiarities of the renormalization group expansion of η. PMID:25122246

  20. Pseudo-entanglement evaluated in noninertial frames

    SciTech Connect

    Mehri-Dehnavi, Hossein; Mirza, Behrouz; Mohammadzadeh, Hosein; Rahimi, Robabeh

    2011-05-15

    Research Highlights: > We study pseudo-entanglement in noninertial frames. > We examine different measures of entanglement and nonclassical correlation for the state. > We find the threshold for entanglement is changed in noninertial frames. > We also describe the behavior of local unitary classes of states in noninertial frames. - Abstract: We study quantum discord, in addition to entanglement, of bipartite pseudo-entanglement in noninertial frames. It is shown that the entanglement degrades from its maximum value in a stationary frame to a minimum value in an infinite accelerating frame. There is a critical region found in which, for particular cases, entanglement of states vanishes for certain accelerations. The quantum discord of pseudo-entanglement decreases by increasing the acceleration. Also, for a physically inaccessible region, entanglement and nonclassical correlation are evaluated and shown to match the corresponding values of the physically accessible region for an infinite acceleration.

  1. Next Generation Characterisation of Cereal Genomes for Marker Discovery

    PubMed Central

    Visendi, Paul; Batley, Jacqueline; Edwards, David

    2013-01-01

    Cereal crops form the bulk of the world’s food sources, and thus their importance cannot be understated. Crop breeding programs increasingly rely on high-resolution molecular genetic markers to accelerate the breeding process. The development of these markers is hampered by the complexity of some of the major cereal crop genomes, as well as the time and cost required. In this review, we address current and future methods available for the characterisation of cereal genomes, with an emphasis on faster and more cost effective approaches for genome sequencing and the development of markers for trait association and marker assisted selection (MAS) in crop breeding programs. PMID:24833229

  2. Evolution of wild cereals during 28 years of global warming in Israel.

    PubMed

    Nevo, Eviatar; Fu, Yong-Bi; Pavlicek, Tomas; Khalifa, Souad; Tavasi, Mordechai; Beiles, Avigdor

    2012-02-28

    Climate change is a major environmental stress threatening biodiversity and human civilization. The best hope to secure staple food for humans and animal feed by future crop improvement depends on wild progenitors. We examined 10 wild emmer wheat (Triticum dicoccoides Koern.) populations and 10 wild barley (Hordeum spontaneum K. Koch) populations in Israel, sampling them in 1980 and again in 2008, and performed phenotypic and genotypic analyses on the collected samples. We witnessed the profound adaptive changes of these wild cereals in Israel over the last 28 y in flowering time and simple sequence repeat allelic turnover. The revealed evolutionary changes imply unrealized risks present in genetic resources for crop improvement and human food production. PMID:22334646

  3. 40 CFR 406.90 - Applicability; description of the ready-to-eat cereal subcategory.

    Code of Federal Regulations, 2012 CFR

    2012-07-01

    ... ready-to-eat cereal subcategory. 406.90 Section 406.90 Protection of Environment ENVIRONMENTAL...-Eat Cereal Subcategory § 406.90 Applicability; description of the ready-to-eat cereal subcategory. The... produce various breakfast cereals normally available for human consumption without cooking....

  4. Pseudo-Equivalent Groups and Linking

    ERIC Educational Resources Information Center

    Haberman, Shelby J.

    2015-01-01

    Adjustment by minimum discriminant information provides an approach to linking test forms in the case of a nonequivalent groups design with no satisfactory common items. This approach employs background information on individual examinees in each administration so that weighted samples of examinees form pseudo-equivalent groups in the sense that…

  5. Science, Pseudo-Science, and Natural Theology.

    ERIC Educational Resources Information Center

    Ferre, Frederick

    1983-01-01

    Religions are unfalsifiable in the short run but open to long-term influence by science. Conversely, scientists sometimes extend their findings to mythic proportions. The struggle between evolutionary science and pseudo-scientific creationism rests on tensions resulting at this interface. Good education and social fairness require greater…

  6. A Case of Pseudo-Retardation.

    ERIC Educational Resources Information Center

    Stott, D. H.

    Review of a case study of a 4-year-old girl who assumed the role of a retardate reveals that the girl probably suffered multiple congenital impairments of a minor character that affected the central nervous system and the structures governing social behavior and maturation. The stated basis for pseudo-retardation is the person's ability to…

  7. Teaching Outside the (Cereal) Box: A Molecular Genetics Activity.

    ERIC Educational Resources Information Center

    Byrd, Jeffrey J.

    2000-01-01

    Describes a method for teaching about DNA using looped cereals. Outlines the procedure and concept in detail. Presents several possible concepts that allow the instructor to choose what is the most appropriate for students. (SAH)

  8. Functional cereals for production in new and variable climates.

    PubMed

    Henry, Robert J; Rangan, Parimalan; Furtado, Agnelo

    2016-04-01

    Adaptation of cereal crops to variable or changing climates requires that essential quality attributes are maintained to deliver food that will be acceptable to human consumers. Advances in cereal genomics are delivering insights into the molecular basis of nutritional and functional quality traits in cereals and defining new genetic resources. Understanding the influence of the environment on expression of these traits will support the retention of these essential functional properties during climate adaptation. New cereals for use as whole grain or ground to flour for other food products may be based upon the traditional species such as rice and wheat currently used in these food applications but may also include new options exploiting genomics tools to allow accelerated domestication of new species. PMID:26828379

  9. Improving cereal grain carbohydrates for diet and health

    PubMed Central

    Lafiandra, Domenico; Riccardi, Gabriele; Shewry, Peter R.

    2014-01-01

    Starch and cell wall polysaccharides (dietary fibre) of cereal grains contribute to the health benefits associated with the consumption of whole grain cereal products, including reduced risk of obesity, type 2 diabetes, cardiovascular disease and colorectal cancer. The physiological bases for these effects are reviewed in relation to the structures and physical properties of the polysaccharides and their behaviour (including digestion and fermentation) in the gastro-intestinal tract. Strategies for modifying the content and composition of grain polysaccharides to increase their health benefits are discussed, including exploiting natural variation and using mutagenesis and transgenesis to generate further variation. These studies will facilitate the development of new types of cereals and cereal products to face the major health challenges of the 21st century. PMID:24966450

  10. Gravity Perception and Response in Shoots of Cereal Grasses

    NASA Technical Reports Server (NTRS)

    Kaufman, P. B.; Song, I.; Bluncson, C.

    1985-01-01

    Two components of the gravitropic curvature response in cereal grass pulvini are studied. These two components are gravity perception and mechanism of response following the transduction phase. The effects of gravity, time lag, protein synthesis and enzyme production are included.

  11. Functional properties of pasta enriched with variable cereal brans.

    PubMed

    Kaur, Gurkirat; Sharma, Savita; Nagi, H P S; Dar, Basharat N

    2012-08-01

    To explore the potentiality of cereal brans for preparation of fiber enriched pasta, various cereal brans (Wheat, Rice, Barley and Oat) were added at 0, 5, 10, 15, 20 and 25 per cent to durum wheat semolina. The effect of cereal bran enrichment on the colour, cooking, sensory quality and shelf life of enriched pasta was assessed at ambient temperature. Pasta prepared with added fiber at 25 per cent level had the highest protein and dietary fiber content as compared to control. Enrichment with variable fiber sources improved the brightness of pasta, as colour of pasta enhanced significantly. Addition of cereal brans resulted an increase in the water absorption and cooking losses of pasta. This effect was dependent on the level and type of cereal brans. Significant correlation (r = 0.80) was obtained between water absorption and volume expansion in all types of bran enriched pasta. At 25 per cent level of supplementation, maximum solids were leached into cooking water. Bran enriched pasta required less cooking time for complete gelatinization of starch. Increasing level of cereal brans had significantly affected the overall acceptability of enriched pasta. Cooking quality of pasta remained constant during storage. Non significant effect of storage was found on water activity, free fatty acids. Enriched pasta (15 per cent level of wheat, rice and oat bran and 10 per cent barley bran) was highly acceptable upto 4 months of storage with respect to quality. PMID:23904655

  12. Intestinal T cell responses to cereal proteins in celiac disease.

    PubMed

    Kilmartin, C; Wieser, H; Abuzakouk, M; Kelly, J; Jackson, J; Feighery, C

    2006-01-01

    Celiac disease is caused by sensitivity to wheat gluten in genetically susceptible individuals. The etiological role of the other wheat-related cereals, barley, rye, and oats, is still debated. In order to investigate this issue further, in this study we examined the immune response of celiac mucosal T cell lines to fractions from all four cereals. Cell stimulation was assessed by measuring proliferation (employing (3)H-thymidine incorporation) or cytokine (IL-2, IFN-gamma) production. All five T cell lines demonstrated immunoreactivity to protein fractions from the four related cereals. In some cell lines, reactivity to wheat, barley, and rye was only evident when these cereal fractions had been pretreated with tissue transglutaminase. This study confirms the similar T cell antigenic reactivity of these four related cereals and has implications for their exclusion in the gluten-free diet. However, despite oats stimulation of T cell lines, this cereal does not activate a mucosal lesion in most celiac patients. PMID:16416236

  13. Systemic Lupus Erythematosus Presenting with Massive Ascites: A Case of Pseudo-Pseudo Meigs Syndrome

    PubMed Central

    Song, J.; Abrudescu-Opran, A.

    2016-01-01

    The case presented is consistent with the phenomenon known as Pseudo-Pseudo Meigs Syndrome (PPMS). In it, we describe a young woman with newly diagnosed Systemic Lupus Erythematosus presenting with ascites, pleural effusions, and an elevated CA-125 level. Although rare, and of uncertain etiology, PPMS is becoming increasingly recognized in the literature. It should be considered as a differential diagnosis in such patients, along with the search for malignancy. PMID:27366341

  14. Development of cereal-based functional food using cereal-mix substrate fermented with probiotic strain - Pichia kudriavzevii OG32.

    PubMed

    Ogunremi, Omotade R; Agrawal, Renu; Sanni, Abiodun I

    2015-11-01

    Probiotic strains contribute to the functionality of foods during fermentation. In this present work, cereal-mix was fermented with probiotic Pichia kudriavzevii OG32. Selected fermentation parameters and functional properties of the product were determined. The growth of Pichia kudriavzevii OG32 was supported by the cereal-mix containing 1% salt and 0.2% red chili powder to counts of between 7.46 and 8.22 Log10 cfu/mL within 24 h. Pichia kudriavzevii OG32 increased the viscosity of cereal-mix with the highest inoculum size (1.84x105cfu/ml) giving the highest viscosity of 1793.6 mPa.S. An inoculum size of 1.98 × 10(4) cfu/mL gave the most acceptable product based on the sensory evaluation by the panelist. Forty volatile compounds were identified in the fermented product, while acids (32.21%) and esters (32.37%) accounted for the largest proportions. The cereal-based fermented product scavenged DPPH from 200 μmol/L methanolic solution by 55.71%. Probiotic yeast improved the sensory and some functional properties of cereal-based substrate during fermentation. This is one of the first reports on the volatile composition of cereal-based functional food produced with probiotic yeast. PMID:26788290

  15. Pseudo ribbon metal ion beam source

    SciTech Connect

    Stepanov, Igor B. Ryabchikov, Alexander I.; Sivin, Denis O.; Verigin, Dan A.

    2014-02-15

    The paper describes high broad metal ion source based on dc macroparticle filtered vacuum arc plasma generation with the dc ion-beam extraction. The possibility of formation of pseudo ribbon beam of metal ions with the parameters: ion beam length 0.6 m, ion current up to 0.2 A, accelerating voltage 40 kV, and ion energy up to 160 kV has been demonstrated. The pseudo ribbon ion beam is formed from dc vacuum arc plasma. The results of investigation of the vacuum arc evaporator ion-emission properties are presented. The influence of magnetic field strength near the cathode surface on the arc spot movement and ion-emission properties of vacuum-arc discharge for different cathode materials are determined. It was shown that vacuum-arc discharge stability can be reached when the magnetic field strength ranges from 40 to 70 G on the cathode surface.

  16. Epidemiology and integrated management of persistently transmitted aphid-borne viruses of legume and cereal crops in West Asia and North Africa.

    PubMed

    Makkouk, Khaled M; Kumari, Safaa G

    2009-05-01

    Cool-season food legumes (faba bean, lentil, chickpea and pea) and cereals (bread and durum wheat and barley) are the most important and widely cultivated crops in West Asia and North Africa (WANA), where they are the main source of carbohydrates and protein for the majority of the population. Persistently transmitted aphid-borne viruses pose a significant limitation to legume and cereal production worldwide. Surveys conducted in many countries in WANA during the last three decades established that the most important of these viruses are: Faba bean necrotic yellows virus (FBNYV: genus Nanovirus; family Nanoviridae), Bean leafroll virus (BLRV: genus Luteovirus; family Luteoviridae), Beet western yellows virus (BWYV: genus Polerovirus; family Luteoviridae), Soybean dwarf virus (SbDV: genus Luteovirus; family Luteoviridae) and Chickpea chlorotic stunt virus (CpCSV: genus Polerovirus; family Luteoviridae) which affect legume crops, and Barley yellow dwarf virus-PAV (BYDV-PAV: genus Luteovirus; family Luteoviridae), Barley yellow dwarf virus-MAV (BYDV-MAV: genus Luteovirus; family Luteoviridae) and Cereal yellow dwarf virus-RPV (CYDV-RPV: genus Polerovirus; family Luteoviridae) which affect cereal crops. Loss in yield caused by these viruses is usually high when infection occurs early in the growing season. Many aphid vector species for the above-mentioned viruses are reported to be prevalent in the WANA region. In addition, in this region many wild species (annual or perennial) were found infected with these viruses and may play an important role in their ecology and spread. Fast spread of these diseases was always associated with high aphid vector populations and activity. Although virus disease management can be achieved by combining several control measures, development of resistant genotypes is undoubtedly one of the most appropriate control methods. Over the last three decades barley and wheat genotypes resistant to BYDV, faba bean genotypes resistant to BLRV, and

  17. A pseudo-haptic knot diagram interface

    NASA Astrophysics Data System (ADS)

    Zhang, Hui; Weng, Jianguang; Hanson, Andrew J.

    2011-01-01

    To make progress in understanding knot theory, we will need to interact with the projected representations of mathematical knots which are of course continuous in 3D but significantly interrupted in the projective images. One way to achieve such a goal would be to design an interactive system that allows us to sketch 2D knot diagrams by taking advantage of a collision-sensing controller and explore their underlying smooth structures through a continuous motion. Recent advances of interaction techniques have been made that allow progress to be made in this direction. Pseudo-haptics that simulates haptic effects using pure visual feedback can be used to develop such an interactive system. This paper outlines one such pseudo-haptic knot diagram interface. Our interface derives from the familiar pencil-and-paper process of drawing 2D knot diagrams and provides haptic-like sensations to facilitate the creation and exploration of knot diagrams. A centerpiece of the interaction model simulates a "physically" reactive mouse cursor, which is exploited to resolve the apparent conflict between the continuous structure of the actual smooth knot and the visual discontinuities in the knot diagram representation. Another value in exploiting pseudo-haptics is that an acceleration (or deceleration) of the mouse cursor (or surface locator) can be used to indicate the slope of the curve (or surface) of whom the projective image is being explored. By exploiting these additional visual cues, we proceed to a full-featured extension to a pseudo-haptic 4D visualization system that simulates the continuous navigation on 4D objects and allows us to sense the bumps and holes in the fourth dimension. Preliminary tests of the software show that main features of the interface overcome some expected perceptual limitations in our interaction with 2D knot diagrams of 3D knots and 3D projective images of 4D mathematical objects.

  18. Efficient pseudo-enantiomeric carbohydrate olefin ligands.

    PubMed

    Grugel, Holger; Albrecht, Fabian; Minuth, Tobias; Boysen, Mike M K

    2012-07-20

    Highly efficient pseudo-enantiomeric olefin ligands were designed from D-glucose and D-galactose. These ligands yield consistently excellent levels of enantioselectivity in Rh(I)-catalyzed 1,4-additions of aryl- and alkenylboronic acids to achiral enones and high diastereoselectivity with chiral substrates. Contrary to established olefin ligands, they are obtained enantiomerically pure via short syntheses without racemic resolution steps, making them a valuable addition to the arsenal of chiral ligands with olefinic donor sites. PMID:22780685

  19. Physiological tremor under pseudo-fraction gravity.

    PubMed

    Miao, T; Sakamoto, K

    1995-01-01

    The effect of pseudo-fraction gravity on physiological tremor of the human finger (finger tremor) has been examined experimentally by immersing an index finger into water at different immersion levels. The pseudo-fraction gravity, gamma G, was established by water buoyancy at immersion level omega, G being gravitation acceleration and gamma between zero and unit. The nature of variations of finger tremor under the influence of gamma G is estimated based on FFT spectral analysis. It is illustrated that with a decrease in gamma, or equivalently an increase in omega, two dominant peaks remaining approximately constant in frequencies around 10Hz and 20Hz are found, while peak amplitude is decreased rapidly for higher peak and slowly for lower one. Theoretically the effect of pseudo-fraction gravity is analyzed in terms of a specific model for finger tremor. The experimental results presented in this paper are predicted rather well by two resonant modes which occurred in our model system. It is possible to conclude that the model, which is characterized by a pair of antagonistic muscles and two reflex pathways, provides an adequate quantitative description of finger tremor. PMID:7621132

  20. A European Database of Fusarium graminearum and F. culmorum Trichothecene Genotypes

    PubMed Central

    Pasquali, Matias; Beyer, Marco; Logrieco, Antonio; Audenaert, Kris; Balmas, Virgilio; Basler, Ryan; Boutigny, Anne-Laure; Chrpová, Jana; Czembor, Elżbieta; Gagkaeva, Tatiana; González-Jaén, María T.; Hofgaard, Ingerd S.; Köycü, Nagehan D.; Hoffmann, Lucien; Lević, Jelena; Marin, Patricia; Miedaner, Thomas; Migheli, Quirico; Moretti, Antonio; Müller, Marina E. H.; Munaut, Françoise; Parikka, Päivi; Pallez-Barthel, Marine; Piec, Jonathan; Scauflaire, Jonathan; Scherm, Barbara; Stanković, Slavica; Thrane, Ulf; Uhlig, Silvio; Vanheule, Adriaan; Yli-Mattila, Tapani; Vogelgsang, Susanne

    2016-01-01

    Fusarium species, particularly Fusarium graminearum and F. culmorum, are the main cause of trichothecene type B contamination in cereals. Data on the distribution of Fusarium trichothecene genotypes in cereals in Europe are scattered in time and space. Furthermore, a common core set of related variables (sampling method, host cultivar, previous crop, etc.) that would allow more effective analysis of factors influencing the spatial and temporal population distribution, is lacking. Consequently, based on the available data, it is difficult to identify factors influencing chemotype distribution and spread at the European level. Here we describe the results of a collaborative integrated work which aims (1) to characterize the trichothecene genotypes of strains from three Fusarium species, collected over the period 2000–2013 and (2) to enhance the standardization of epidemiological data collection. Information on host plant, country of origin, sampling location, year of sampling and previous crop of 1147 F. graminearum, 479 F. culmorum, and 3 F. cortaderiae strains obtained from 17 European countries was compiled and a map of trichothecene type B genotype distribution was plotted for each species. All information on the strains was collected in a freely accessible and updatable database (www.catalogueeu.luxmcc.lu), which will serve as a starting point for epidemiological analysis of potential spatial and temporal trichothecene genotype shifts in Europe. The analysis of the currently available European dataset showed that in F. graminearum, the predominant genotype was 15-acetyldeoxynivalenol (15-ADON) (82.9%), followed by 3-acetyldeoxynivalenol (3-ADON) (13.6%), and nivalenol (NIV) (3.5%). In F. culmorum, the prevalent genotype was 3-ADON (59.9%), while the NIV genotype accounted for the remaining 40.1%. Both, geographical and temporal patterns of trichothecene genotypes distribution were identified. PMID:27092107

  1. A European Database of Fusarium graminearum and F. culmorum Trichothecene Genotypes.

    PubMed

    Pasquali, Matias; Beyer, Marco; Logrieco, Antonio; Audenaert, Kris; Balmas, Virgilio; Basler, Ryan; Boutigny, Anne-Laure; Chrpová, Jana; Czembor, Elżbieta; Gagkaeva, Tatiana; González-Jaén, María T; Hofgaard, Ingerd S; Köycü, Nagehan D; Hoffmann, Lucien; Lević, Jelena; Marin, Patricia; Miedaner, Thomas; Migheli, Quirico; Moretti, Antonio; Müller, Marina E H; Munaut, Françoise; Parikka, Päivi; Pallez-Barthel, Marine; Piec, Jonathan; Scauflaire, Jonathan; Scherm, Barbara; Stanković, Slavica; Thrane, Ulf; Uhlig, Silvio; Vanheule, Adriaan; Yli-Mattila, Tapani; Vogelgsang, Susanne

    2016-01-01

    Fusarium species, particularly Fusarium graminearum and F. culmorum, are the main cause of trichothecene type B contamination in cereals. Data on the distribution of Fusarium trichothecene genotypes in cereals in Europe are scattered in time and space. Furthermore, a common core set of related variables (sampling method, host cultivar, previous crop, etc.) that would allow more effective analysis of factors influencing the spatial and temporal population distribution, is lacking. Consequently, based on the available data, it is difficult to identify factors influencing chemotype distribution and spread at the European level. Here we describe the results of a collaborative integrated work which aims (1) to characterize the trichothecene genotypes of strains from three Fusarium species, collected over the period 2000-2013 and (2) to enhance the standardization of epidemiological data collection. Information on host plant, country of origin, sampling location, year of sampling and previous crop of 1147 F. graminearum, 479 F. culmorum, and 3 F. cortaderiae strains obtained from 17 European countries was compiled and a map of trichothecene type B genotype distribution was plotted for each species. All information on the strains was collected in a freely accessible and updatable database (www.catalogueeu.luxmcc.lu), which will serve as a starting point for epidemiological analysis of potential spatial and temporal trichothecene genotype shifts in Europe. The analysis of the currently available European dataset showed that in F. graminearum, the predominant genotype was 15-acetyldeoxynivalenol (15-ADON) (82.9%), followed by 3-acetyldeoxynivalenol (3-ADON) (13.6%), and nivalenol (NIV) (3.5%). In F. culmorum, the prevalent genotype was 3-ADON (59.9%), while the NIV genotype accounted for the remaining 40.1%. Both, geographical and temporal patterns of trichothecene genotypes distribution were identified. PMID:27092107

  2. Priority regions for research on dryland cereals and legumes

    PubMed Central

    Hyman, Glenn; Barona, Elizabeth; Biradar, Chandrashekhar; Guevara, Edward; Dixon, John; Beebe, Steve; Castano, Silvia Elena; Alabi, Tunrayo; Gumma, Murali Krishna; Sivasankar, Shoba; Rivera, Ovidio; Espinosa, Herlin; Cardona, Jorge

    2016-01-01

    Dryland cereals and legumes  are important crops in farming systems across the world.  Yet they are frequently neglected among the priorities for international agricultural research and development, often due to lack of information on their magnitude and extent. Given what we know about the global distribution of dryland cereals and legumes, what regions should be high priority for research and development to improve livelihoods and food security? This research evaluated the geographic dimensions of these crops and the farming systems where they are found worldwide. The study employed geographic information science and data to assess the key farming systems and regions for these crops. Dryland cereal and legume crops should be given high priority in 18 farming systems worldwide, where their cultivated area comprises more than 160 million ha. These regions include the dryer areas of South Asia, West and East Africa, the Middle East and North Africa, Central America and other parts of Asia. These regions are prone to drought and heat stress, have limiting soil constraints, make up half of the global population and account for 60 percent of the global poor and malnourished. The dryland cereal and legume crops and farming systems merit more research and development attention to improve productivity and address development problems. This project developed an open access dataset and information resource that provides the basis for future analysis of the geographic dimensions of dryland cereals and legumes. PMID:27303632

  3. Priority regions for research on dryland cereals and legumes.

    PubMed

    Hyman, Glenn; Barona, Elizabeth; Biradar, Chandrashekhar; Guevara, Edward; Dixon, John; Beebe, Steve; Castano, Silvia Elena; Alabi, Tunrayo; Gumma, Murali Krishna; Sivasankar, Shoba; Rivera, Ovidio; Espinosa, Herlin; Cardona, Jorge

    2016-01-01

    Dryland cereals and legumes  are important crops in farming systems across the world.  Yet they are frequently neglected among the priorities for international agricultural research and development, often due to lack of information on their magnitude and extent. Given what we know about the global distribution of dryland cereals and legumes, what regions should be high priority for research and development to improve livelihoods and food security? This research evaluated the geographic dimensions of these crops and the farming systems where they are found worldwide. The study employed geographic information science and data to assess the key farming systems and regions for these crops. Dryland cereal and legume crops should be given high priority in 18 farming systems worldwide, where their cultivated area comprises more than 160 million ha. These regions include the dryer areas of South Asia, West and East Africa, the Middle East and North Africa, Central America and other parts of Asia. These regions are prone to drought and heat stress, have limiting soil constraints, make up half of the global population and account for 60 percent of the global poor and malnourished. The dryland cereal and legume crops and farming systems merit more research and development attention to improve productivity and address development problems. This project developed an open access dataset and information resource that provides the basis for future analysis of the geographic dimensions of dryland cereals and legumes. PMID:27303632

  4. Storage stability and quality assessment of processed cereal brans.

    PubMed

    Sharma, Savita; Kaur, Satinder; Dar, B N; Singh, Baljit

    2014-03-01

    Quality improvement of cereal brans, a health promoting ingredient for functional foods is the emerging research concept due to their low shelf stability and presence of non-nutrient components. A study was conducted to evaluate the storage quality of processed milling industry byproducts so that these can be potentially utilized as a dietary fibre source. Different cereal brans (wheat, rice, barley and oat) were processed by dry, wet, microwave heating, extrusion cooking and chemical methods at variable conditions. Processed brans were stored in high density polyethylene (HDPE) pouches at ambient and refrigeration temperature. Quality assessments (moisture, free fatty acids, water activity and physical quality) of brans were done up to six months, at one month intervals. Free fatty acid content, moisture and water activity of the cereal brans remained stable during the entire storage period. Among treatments, extrusion processing is the most effective for stability. Processing treatments and storage temperature have the positive effect on extending the shelf life of all cereal brans. Therefore, processed cereal brans can be used as a dietary fortificant for the development of value added food products. PMID:24587536

  5. Presweetened dry breakfast cereals: potential for dental danger.

    PubMed

    Shannon, I L; McCartney, J C

    1981-01-01

    Sugar concentrations were measured by enzymatic methods in twenty-eight presweetened breakfast cereals. Means for the various sugars were in essential agreement with recently published gas-liquid chromatography results and also with the sugar values expressed on the labels of these cereals. Thus, accurate and reproducible analytical methods are available for sugar measurements in foods; sugar levels in foods can now be assessed with confidence and the information disseminated to interested food purchasers. Oral retention time, as measured by salivary sucrose determinations, was prolonged after ingestion of these cereals directly from the box; oral clearance was more rapid, when the same subject drank a sugar solution of the same concentration. Presweetened cereals are candidates for frequent ingestion as snacks, due to their candy-like taste. This fact plus the high sugar levels in these cereals and the tendency to prolonged intraoral retention, automatically classifies these materials as potential dental hazards, when used as snacks. It is not implied that this is the case, when these products are eaten at mealtime with milk. PMID:6944319

  6. Salmonella contamination of cereal ingredients for animal feeds.

    PubMed

    Davies, R H; Wales, A D

    2013-10-25

    Cereal ingredients for animal feedstuffs may become contaminated by Salmonella on their farms of origin. This is often concentrated in multiple foci, owing to contamination by rodents and other wildlife which may be missed by routine sampling, and may involve serovars of particular public health significance, such as Salmonella Typhimurium (STM). The study examined such contamination in domestically-produced cereal ingredients in the United Kingdom. Cereal-producing farms with associated cattle or pig enterprises (43) and feedmills (6) were investigated, following the isolation of STM from their premises (feedmills) or STM DT104 from their livestock (farms) by routine surveillance. Cereal samples from feedmills yielded two STM isolates from the same premises, of the same phage types as were isolated from wild bird faeces at ingredient intake and product loading areas. Farm investigations identified numerous Salmonella serovars, including STM, on grain harvesting and handling equipment, in grain storage areas, and in wildlife samples. Mice were removed from one pig farm and shed Salmonella Derby and Salmonella Bovismorbificans for 10 months afterwards. Grain stores more than one kilometre away from livestock areas were rarely found to be contaminated with STM. The principal issues with Salmonella contamination of cereals appeared to be the use of livestock areas as temporary grain stores on cattle farms, and access to stored grain by wildlife and domestic animals. PMID:23915993

  7. HCV genotypes in Morocco.

    PubMed

    Benani, A; El-Turk, J; Benjelloun, S; Sekkat, S; Nadifi, S; Hda, N; Benslimane, A

    1997-08-01

    To determine the hepatitis C virus (HCV) genotypes circulating in Morocco, virus isolates from 105 chronically infected and 19 hemodialysis patients were examined using the line probe assay. Genotypes 1 and 2 only were found among Moroccan patients. Subtypes 1b (47.6%) and 2a/2c (37.1%) were the most common, whereas subtype 1a (2.8%) was less common. Among the hemodialysis patients, only genotype 1 was found with a prevalence of 68.4% for subtype 1b and 15.8% for the subtype 1a. It was also shown that the HCV genotypes distribution varies with age in both studied populations. Subtype 1b was most prevalent among older patients, whereas subtype 2a/2c was mainly found among younger ones. Although Morocco belongs to the African continent, the circulating HCV strains are similar to those observed in some American and European countries. PMID:9260687

  8. APOE Genotyping, Cardiovascular Disease

    MedlinePlus

    ... Risk Assessment ; HDL Cholesterol ; LDL Cholesterol ; Lipid Profile ; Triglycerides Were you looking instead for APOE genotyping ordered ... the skin called xanthomas, a high level of triglycerides in the blood, and atherosclerosis that develops at ...

  9. HIV Genotypic Resistance Testing

    MedlinePlus

    ... be limited. Home Visit Global Sites Search Help? HIV Antiretroviral Drug Resistance Testing, Genotypic Share this page: Was this page helpful? Also known as: Anti-retroviral Drug Resistance Testing; ARV Resistance Testing Formal name: ...

  10. Ochratoxin A in cereal-derived products in Turkey: occurrence and exposure assessment.

    PubMed

    Kabak, Bulent

    2009-02-01

    Eighty-three samples of cereal-derived products including 24 breakfast cereals, 24 cereal-based baby foods and 35 beers purchased from supermarkets and small shops of Adana in Turkey were analysed for the presence of ochratoxin A (OTA) using immunoaffinity column (IAC) clean-up and high performance liquid chromatography with fluorescence detection (HPLC-FD). The average OTA recoveries from spiked breakfast cereal and cereal-based baby food and beers samples were in the range of 79.33-83.86%, 72.93-80.34% and 76.47-83.11%, respectively. The relative standard deviations (RSD(r)) of recoveries for breakfast cereals, cereal-based baby foods and beers were 1.1-3.39%, 2.56-8.37% and 5.73-13.61%, respectively. OTA was detected in 38% of breakfast cereals, in 17% of cereal-based baby food and in 14% of beer samples. OTA levels ranged from 0.172 to 1.84, from 0.122 to 0.374 and from 0.012 to 0.045 ng ml(-1), respectively. All cereal-derived products examined contained OTA at concentrations very much lower below the limit recommended by European Commission Regulation. The results of this study suggest that cereal-derived products such as breakfast cereals, cereal-based baby foods and beer consumed in Turkey presents no risk by human exposure to OTA through their consumption. PMID:19056455

  11. Regulation, evolution, and functionality of flavonoids in cereal crops.

    PubMed

    Liu, Zehou; Liu, Yaxi; Pu, Zhien; Wang, Jirui; Zheng, Youliang; Li, Yanhong; Wei, Yuming

    2013-11-01

    Flavonoids are plant secondary metabolites that contribute to the adaptation of plants to environmental stresses, including resistance to abiotic and biotic stress. Flavonoids are also beneficial for human health and depress the progression of some chronic diseases. The biosynthesis of flavonoids, which belong to a large family of phenolic compounds, is a complex metabolic process with many pathways that produce different metabolites, controlled by key enzymes. There is limited knowledge about the composition, biosynthesis and regulation of flavonoids in cereals. Improved understanding of the accumulation of flavonoids in cereal grains would help to improve human nutrition through these staple foods. The biosynthesis of flavonoids, scope for altering the flavonoid composition in cereal crops and benefits for human nutrition are reviewed here. PMID:23881316

  12. Development of shelf stable protein rich composite cereal bar.

    PubMed

    Padmashree, Ananthan; Sharma, Gopal Kumar; Srihari, Kadaba Anantharaman; Bawa, Amarinder Singh

    2012-06-01

    Protein rich composite cereal bar based on cereal ingredients was prepared using semi automatic tablet making machine, packed in poly propylene (PP), paper aluminium foil polyethylene (PFP), metallised polyester (MP) followed by vacuum packing in metallized polyester films. Proximate composition, mineral contents as well as changes in peroxide value (PV), free fatty acid value (FFA), thiobarbituric acid value (TBA), browning, fatty acid profile, vitamins, effect of water activity on lipid peroxidation, fortification with vitamins and minerals, microbiological as well as sensory parameters during storage under ambient (15-34°C) and 37°C temperature conditions were studied. Composite cereal bar remained shelf stable for 3 months in PP and 6 months in PFP, MP and MP plus vacuum packing under ambient and 37°C temperature conditions. PMID:23729853

  13. Aflatoxin levels and exposure assessment of Spanish infant cereals.

    PubMed

    Hernández-Martínez, Raquel; Navarro-Blasco, Iñigo

    2010-01-01

    Aflatoxins (AFB1, AFB2, AFG1 and AFG2) are immunosuppressant, mutagenic, teratogenic and carcinogenic agents with a widespread presence in foodstuffs. Since human exposure to aflatoxins occurs primarily by contaminated food intake, and given the greater susceptibility of infants to their adverse effects, the quantification of these mycotoxins in infant food based on cereals is of relevance. Aflatoxin levels were determined in 91 Spanish infant cereals classified in terms of non- and organically produced and several types from 10 different manufacturers, using a extraction procedure followed by inmunoaffinity column clean-up step and HPLC with fluorescence detection (FLD) and post-column derivatisation (Kobra Cell system). Daily aflatoxin intake was also assessed. Preliminary analysis showed a valuable incidence of detected infant cereal samples at an upper concentration level than the detection limit for total aflatoxin (66%), corresponding to a 46, 40, 34 and 11% for AFB1, AFB2, AFG1 and AFG2, respectively. Lower aflatoxin values (median, Q1, Q3) in conventional infant cereal (n = 74, AFB1: cereal ecologically produced (n = 17, AFB1: 0.02 (0.02; 0.21), AFB2: n.d. (n.d.; 0.03), AFG1: 0.02 (0.01; 0.05), and AFG2: 0.007 (n.d.; 0.02) and AFtotal: 0.05 (0.03; 0.31 µg kg(-1)) were found. In addition, five organic formulations (3.11, 1.98, 0.94, 0.47 and 0.21 µg kg(-1)) exceeded European AFB1 legislation (0.10 µg kg(-1)) versus two conventional cereals (0.35 and 0.12 µg kg(-1)). According to the type of infant cereal, those with cocoa had the highest aflatoxin levels. Gluten-free and cereals with dehydrated fruits had an intermediate level and milk- or honey-based cereals and multi-cereals contained the lowest levels. With the exception of the non-compliant cocoa-based organic formulation

  14. Polycyclic aromatic hydrocarbons in cereal products on the Turkish market.

    PubMed

    Kacmaz, Sibel

    2016-09-01

    The contamination level of four EU marker polycyclic aromatic hydrocarbons (PAHs) in some cereal-derived products was surveyed in this study. Thirty-eight samples, 20 bread and 18 breakfast cereals, were purchased from retail shops and local markets of East Black sea region in Turkey. The samples were analysed for four EU marker PAHs, using ultrasonic extraction, solid-phase extraction (SPE) clean up and stable-isotope dilution gas chromatography with mass-spectrometric (GC/MS) detection. The method was validated with the parameters linearity, accuracy, precision, limit of detection (LOD), limit of quantitation (LOQ) and uncertainty. Total content of the four PAHs in bread varied from 0.19 to 0.46 µg kg(-1) and in breakfast cereals from 0.10 to 0.87 µg kg(-1). PMID:26986946

  15. Microbotanical Evidence of Domestic Cereals in Africa 7000 Years Ago

    PubMed Central

    Madella, Marco; García-Granero, Juan José; Out, Welmoed A.; Ryan, Philippa; Usai, Donatella

    2014-01-01

    The study of plant exploitation and early use of cereals in Africa has seen over the years a great input from charred and desiccated macrobotanical remains. This paper presents the results of one of the few examples in Africa of microbotanical analyses. Three grave contexts of phytolith-rich deposits and the dental calculus of 20 individuals were analysed from two Neolithic cemeteries in North and Central Sudan. The radiocarbon-dated phytoliths from the burial samples show the presence of Near East domestic cereals in Northern Sudan at least 7000 years ago. Phytoliths also indicate the exploitation of wild, savannah-adapted millets in Central Sudan between 7500 and 6500 years ago. The calculus samples contained starch grains from wheat/barley, pulses and millets, as well as panicoid phytoliths. This evidence shows that Near East domestic cereals were consumed in Northern Africa at least 500 years earlier than previously thought. PMID:25338096

  16. Microbotanical evidence of domestic cereals in Africa 7000 years ago.

    PubMed

    Madella, Marco; García-Granero, Juan José; Out, Welmoed A; Ryan, Philippa; Usai, Donatella

    2014-01-01

    The study of plant exploitation and early use of cereals in Africa has seen over the years a great input from charred and desiccated macrobotanical remains. This paper presents the results of one of the few examples in Africa of microbotanical analyses. Three grave contexts of phytolith-rich deposits and the dental calculus of 20 individuals were analysed from two Neolithic cemeteries in North and Central Sudan. The radiocarbon-dated phytoliths from the burial samples show the presence of Near East domestic cereals in Northern Sudan at least 7000 years ago. Phytoliths also indicate the exploitation of wild, savannah-adapted millets in Central Sudan between 7500 and 6500 years ago. The calculus samples contained starch grains from wheat/barley, pulses and millets, as well as panicoid phytoliths. This evidence shows that Near East domestic cereals were consumed in Northern Africa at least 500 years earlier than previously thought. PMID:25338096

  17. Waxy Phenotype Evolution in the Allotetraploid Cereal Broomcorn Millet: Mutations at the GBSSI Locus in Their Functional and Phylogenetic Context

    PubMed Central

    Hunt, Harriet V.; Moots, Hannah M.; Graybosch, Robert A.; Jones, Huw; Parker, Mary; Romanova, Olga; Jones, Martin K.; Howe, Christopher J.; Trafford, Kay

    2013-01-01

    Waxy mutants, in which endosperm starch contains ∼100% amylopectin rather than the wild-type composition of ∼70% amylopectin and ∼30% amylose, occur in many domesticated cereals. The cultivation of waxy varieties is concentrated in east Asia, where there is a culinary preference for glutinous-textured foods that may have developed from ancient food processing traditions. The waxy phenotype results from mutations in the GBSSI gene, which catalyzes amylose synthesis. Broomcorn or proso millet (Panicum miliaceum L.) is one of the world’s oldest cultivated cereals, which spread across Eurasia early in prehistory. Recent phylogeographic analysis has shown strong genetic structuring that likely reflects ancient expansion patterns. Broomcorn millet is highly unusual in being an allotetraploid cereal with fully waxy varieties. Previous work characterized two homeologous GBSSI loci, with multiple alleles at each, but could not determine whether both loci contributed to GBSSI function. We first tested the relative contribution of the two GBSSI loci to amylose synthesis and second tested the association between GBSSI alleles and phylogeographic structure inferred from simple sequence repeats (SSRs). We evaluated the phenotype of all known GBSSI genotypes in broomcorn millet by assaying starch composition and protein function. The results showed that the GBSSI-S locus is the major locus controlling endosperm amylose content, and the GBSSI-L locus has strongly reduced synthesis capacity. We genotyped 178 individuals from landraces from across Eurasia for the 2 GBSSI and 16 SSR loci and analyzed phylogeographic structuring and the geographic and phylogenetic distribution of GBSSI alleles. We found that GBSSI alleles have distinct spatial distributions and strong associations with particular genetic clusters defined by SSRs. The combination of alleles that results in a partially waxy phenotype does not exist in landrace populations. Our data suggest that broomcorn millet

  18. Global synthesis of drought effects on cereal production

    NASA Astrophysics Data System (ADS)

    Daryanto, S.; Wang, L.; Jacinthe, P. A.

    2015-12-01

    Cereal grains remain as the most important source of calories for the majority of human population. Yet drought has adversely affected their production which co-varies with factors such as crop species, phenological phases and agro-ecosystem. The extent to which those factors affect the vulnerability of cereal agriculture to drought, however, remains unclear. Using a meta-analysis approach, this study aims to better characterize the effects of these factors and to provide critical information on minimizing yield loss. We collected data from peer-reviewed publications between 1980 and 2015 which examined cereal yield responses to drought using field experiments. We performed unweighted analysis using the log response ratio to calculate the bootstrapped confidence limits of yield responses and calculated drought sensitivities for different species (i.e., maize, wheat, rice, barley, sorghum, millet), phenological phases (i.e., vegetative, reproductive, and throughout growing season), soil texture (i.e., fine, medium, coarse), and agro-ecosystems (i.e., dryland vs non-dryland). Our result showed that yield reduction varied with species, with wheat having lower sensitivity and yield reduction (20.6%) compared to maize (39.3%) at approximately 60% water reduction. Millet had the lowest yield reduction compared to other cereal species while rice showed a sharp decline in yield with greater than 50% of water reduction. Drought that occurred during crop reproductive phase caused greater yield reduction (30%) than that occurred during vegetative phase (20%). Maize was particularly sensitive to yield loss when drought occurred during reproductive phase while other cereal species tended to have similar sensitivity to drought during vegetative or reproductive phase. We also found that cereal cultivation in the drylands was more prone to yield loss than in the non-dryland regions, but no difference was observed among different soil textures.

  19. Effects of processing on mycotoxin stability in cereals.

    PubMed

    Milani, Jafar; Maleki, Gisoo

    2014-09-01

    The mycotoxins that generally occur in cereals and other products are not completely destroyed during food-processing operations and can contaminate finished processed foods. The mycotoxins most usually associated with cereal grains are aflatoxins, ochratoxins, deoxynivalenol, zearalenone and fumonisins. The various food processes that may have effects on mycotoxins include cleaning, milling, brewing, cooking, baking, frying, roasting, flaking, alkaline cooking, nixtamalization, and extrusion. Most of the food processes have variable effects on mycotoxins, with those that utilize high temperatures having the greatest effects. In general, the processes reduce mycotoxin concentrations significantly, but do not eliminate them completely. This review focuses on the effects of various thermal treatments on mycotoxins. PMID:24497303

  20. Pseudo-Cushing - A Clinical Challenge?

    PubMed

    Pecori Giraldi, Francesca; Ambrogio, Alberto G

    2016-01-01

    The distinction between Cushing's syndrome and pseudo-Cushing is a major clinical challenge. Indeed, any endocrinologist used to dealing with Cushing's syndrome has certainly faced this dilemma more than once and is aware that there are no clear-cut solutions. Several factors contribute to this ongoing quandary, such as unbalanced epidemiology, overlap in clinical features and inherent variability in test responses. Thus, extreme care has to be taken in both excluding and confirming Cushing's syndrome in patients with mild clinical features and borderline laboratory alterations. PMID:27211794

  1. Pseudo exchange bias due to rotational anisotropy

    NASA Astrophysics Data System (ADS)

    Ehrmann, A.; Komraus, S.; Blachowicz, T.; Domino, K.; Nees, M. K.; Jakobs, P. J.; Leiste, H.; Mathes, M.; Schaarschmidt, M.

    2016-08-01

    Ferromagnetic nanostructure arrays with particle dimensions between 160 nm and 400 nm were created by electron-beam lithography. The permalloy structures consist of rectangular-shaped walls around a square open space. While measuring their magnetic properties using the Magneto-Optical Kerr Effect (MOKE), in some angular regions an exchange bias (EB) seemed to appear. This paper gives an overview of possible reasons for this "pseudo exchange bias" and shows experimentally and by means of micromagnetic simulations that this effect can be attributed to unintentionally measuring minor loops.

  2. Avirulence Genes in Cereal Powdery Mildews: The Gene-for-Gene Hypothesis 2.0

    PubMed Central

    Bourras, Salim; McNally, Kaitlin E.; Müller, Marion C.; Wicker, Thomas; Keller, Beat

    2016-01-01

    The gene-for-gene hypothesis states that for each gene controlling resistance in the host, there is a corresponding, specific gene controlling avirulence in the pathogen. Allelic series of the cereal mildew resistance genes Pm3 and Mla provide an excellent system for genetic and molecular analysis of resistance specificity. Despite this opportunity for molecular research, avirulence genes in mildews remain underexplored. Earlier work in barley powdery mildew (B.g. hordei) has shown that the reaction to some Mla resistance alleles is controlled by multiple genes. Similarly, several genes are involved in the specific interaction of wheat mildew (B.g. tritici) with the Pm3 allelic series. We found that two mildew genes control avirulence on Pm3f: one gene is involved in recognition by the resistance protein as demonstrated by functional studies in wheat and the heterologous host Nicotiana benthamiana. A second gene is a suppressor, and resistance is only observed in mildew genotypes combining the inactive suppressor and the recognized Avr. We propose that such suppressor/avirulence gene combinations provide the basis of specificity in mildews. Depending on the particular gene combinations in a mildew race, different genes will be genetically identified as the “avirulence” gene. Additionally, the observation of two LINE retrotransposon-encoded avirulence genes in B.g. hordei further suggests that the control of avirulence in mildew is more complex than a canonical gene-for-gene interaction. To fully understand the mildew–cereal interactions, more knowledge on avirulence determinants is needed and we propose ways how this can be achieved based on recent advances in the field. PMID:26973683

  3. Antioxidant Secondary Metabolites in Cereals: Potential Involvement in Resistance to Fusarium and Mycotoxin Accumulation.

    PubMed

    Atanasova-Penichon, Vessela; Barreau, Christian; Richard-Forget, Florence

    2016-01-01

    Gibberella and Fusarium Ear Rot and Fusarium Head Blight are major diseases affecting European cereals. These diseases are mainly caused by fungi of the Fusarium genus, primarily Fusarium graminearum and Fusarium verticillioides. These Fusarium species pose a serious threat to food safety because of their ability to produce a wide range of mycotoxins, including type B trichothecenes and fumonisins. Many factors such as environmental, agronomic or genetic ones may contribute to high levels of accumulation of mycotoxins in the grain and there is an urgent need to implement efficient and sustainable management strategies to reduce mycotoxin contamination. Actually, fungicides are not fully efficient to control the mycotoxin risk. In addition, because of harmful effects on human health and environment, their use should be seriously restricted in the near future. To durably solve the problem of mycotoxin accumulation, the breeding of tolerant genotypes is one of the most promising strategies for cereals. A deeper understanding of the molecular mechanisms of plant resistance to both Fusarium and mycotoxin contamination will shed light on plant-pathogen interactions and provide relevant information for improving breeding programs. Resistance to Fusarium depends on the plant ability in preventing initial infection and containing the development of the toxigenic fungi while resistance to mycotoxin contamination is also related to the capacity of plant tissues in reducing mycotoxin accumulation. This capacity can result from two mechanisms: metabolic transformation of the toxin into less toxic compounds and inhibition of toxin biosynthesis. This last mechanism involves host metabolites able to interfere with mycotoxin biosynthesis. This review aims at gathering the latest scientific advances that support the contribution of grain antioxidant secondary metabolites to the mechanisms of plant resistance to Fusarium and mycotoxin accumulation. PMID:27148243

  4. Antioxidant Secondary Metabolites in Cereals: Potential Involvement in Resistance to Fusarium and Mycotoxin Accumulation

    PubMed Central

    Atanasova-Penichon, Vessela; Barreau, Christian; Richard-Forget, Florence

    2016-01-01

    Gibberella and Fusarium Ear Rot and Fusarium Head Blight are major diseases affecting European cereals. These diseases are mainly caused by fungi of the Fusarium genus, primarily Fusarium graminearum and Fusarium verticillioides. These Fusarium species pose a serious threat to food safety because of their ability to produce a wide range of mycotoxins, including type B trichothecenes and fumonisins. Many factors such as environmental, agronomic or genetic ones may contribute to high levels of accumulation of mycotoxins in the grain and there is an urgent need to implement efficient and sustainable management strategies to reduce mycotoxin contamination. Actually, fungicides are not fully efficient to control the mycotoxin risk. In addition, because of harmful effects on human health and environment, their use should be seriously restricted in the near future. To durably solve the problem of mycotoxin accumulation, the breeding of tolerant genotypes is one of the most promising strategies for cereals. A deeper understanding of the molecular mechanisms of plant resistance to both Fusarium and mycotoxin contamination will shed light on plant-pathogen interactions and provide relevant information for improving breeding programs. Resistance to Fusarium depends on the plant ability in preventing initial infection and containing the development of the toxigenic fungi while resistance to mycotoxin contamination is also related to the capacity of plant tissues in reducing mycotoxin accumulation. This capacity can result from two mechanisms: metabolic transformation of the toxin into less toxic compounds and inhibition of toxin biosynthesis. This last mechanism involves host metabolites able to interfere with mycotoxin biosynthesis. This review aims at gathering the latest scientific advances that support the contribution of grain antioxidant secondary metabolites to the mechanisms of plant resistance to Fusarium and mycotoxin accumulation. PMID:27148243

  5. Nutritional quality, labelling and promotion of breakfast cereals on the New Zealand market.

    PubMed

    Devi, Anandita; Eyles, Helen; Rayner, Mike; Ni Mhurchu, Cliona; Swinburn, Boyd; Lonsdale-Cooper, Emily; Vandevijvere, Stefanie

    2014-10-01

    Breakfast cereals substantially contribute to daily energy and nutrient intakes among children. In New Zealand, new regulations are being implemented to restrict nutrition and health claims to products that meet certain 'healthy' criteria. This study investigated the difference in nutritional quality, labelling and promotion between 'healthy' and 'less healthy' breakfast cereals, and between breakfast cereals intended for children compared with other breakfast cereals on the New Zealand market. The cross-sectional data collection involved taking pictures of the nutrition information panel (NIP) and front-of pack (FoP) for all breakfast cereals (n = 247) at two major supermarkets in Auckland in 2013. A nutrient profiling tool was used to classify products into 'healthy'/'less healthy'. In total 26% of cereals did not meet the 'healthy' criteria. 'Less healthy' cereals were significantly higher in energy density, sugar and sodium content and lower in protein and fibre content compared with 'healthy' cereals. Significantly more nutrition claims (75%) and health claims (89%) featured on 'healthy' compared with 'less healthy' cereals. On the 'less healthy' cereals, nutrition claims (65%) were more predominant than health claims (17%). Of the 52 products displaying promotional characters, 48% were for 'cereals for kids', and of those, 72% featured on 'less healthy' cereals. In conclusion, most breakfast cereals met the 'healthy' criteria; however, 'cereals for kids' were 'less healthy' and displayed more promotional characters than other cereal categories. Policy recommendations include: food composition targets set or endorsed by government, strengthening and enforcing current regulations on health and nutrition claims, considering the application of nutrient profiling for nutrition claims in addition to health claims, introducing an interpretative FoP labelling system and restricting the use of promotional characters on 'less healthy' breakfast cereals. PMID

  6. Drought impacts on cereal yields in Iberia

    NASA Astrophysics Data System (ADS)

    Gouveia, Célia; Liberato, Margarida L. R.; Russo, Ana; Montero, Irene

    2014-05-01

    In the present context of climate change, land degradation and desertification it becomes crucial to assess the impact of droughts to determine the environmental consequences of a potential change of climate. Large drought episodes in Iberian Peninsula have widespread ecological and environmental impacts, namely in vegetation dynamics, resulting in significant crop yield losses. During the hydrological years of 2004/2005 and 2011/2012 Iberia was affected by two extreme drought episodes (Garcia-Herrera et al., 2007; Trigo et al., 2013). This work aims to analyze the spatial and temporal behavior of climatic droughts at different time scales using spatially distributed time series of drought indicators, such as the Standardized Precipitation Evapotranspiration Index (SPEI) (Vicente-Serrano et al., 2010). This climatic drought index is based on the simultaneous use of precipitation and temperature. We have used CRU TS3 dataset to compute SPEI and the Standardized Precipitation Index (SPI). Results will be analyzed in terms of the mechanisms that are responsible by these drought events and will also be used to assess the impact of droughts in crops. Accordingly an analysis is performed to evaluate the large-scale conditions required for a particular extreme anomaly of long-range transport of water vapor from the subtropics. We have used the European Centre for Medium-Range Weather Forecasts (ECMWF) ERA Interim reanalyses, namely, the geopotential height fields, temperature, wind, divergence data and the specific humidity at all pressure levels and mean sea level pressure (MSLP) and total column water vapor (TCWV) for the Euro-Atlantic sector (100°W to 50°E, 0°N-70°N) at full temporal (six hourly) and spatial (T255; interpolated to 0.75° regular horizontal grid) resolutions available to analyse the large-scale conditions associated with the drought onset. Our analysis revealed severe impacts on cereals crop productions and yield (namely wheat) for Portugal and

  7. The Pseudo-Maxwell Equations Revisited

    NASA Astrophysics Data System (ADS)

    Stavroudis, Orestes N.

    1982-02-01

    The so-called pseudo-Maxwell are a set of partial differential eauations that strongly resemble the Maxwell equations, yet are based only on Fermat's principle, the idea of an orthotomic system of rays, and certain theorems from differential gecmetry. From Fermat's principle, applying the Euler equation from the variational calculus, one obtains the ray equation whose solutions describe ray paths in an inhomogeneous medium. We define an aggregate of such rays as an orthotomic system if it is possible to find a sur-face orthogonal to all rays in the aggregate. Making use of the Frenet equations from differential geometry, one may derive relationships between certain geometrical vectors and their derivatives. These are the pseudo-Maxwell equations. Their existence is' paradoxical. Are they merely a mathematical artifact, an accidental quirk of the notation we are accustomed to use? Or do they indicate that there is more geometry lurking in the physics of electricity and magnetism than we ever dreamed of in our philosophies?

  8. 40 CFR 406.90 - Applicability; description of the ready-to-eat cereal subcategory.

    Code of Federal Regulations, 2011 CFR

    2011-07-01

    ...-to-eat cereal subcategory. 406.90 Section 406.90 Protection of Environment ENVIRONMENTAL PROTECTION AGENCY (CONTINUED) EFFLUENT GUIDELINES AND STANDARDS GRAIN MILLS POINT SOURCE CATEGORY Ready-to-Eat Cereal Subcategory § 406.90 Applicability; description of the ready-to-eat cereal subcategory....

  9. 40 CFR 406.90 - Applicability; description of the ready-to-eat cereal subcategory.

    Code of Federal Regulations, 2010 CFR

    2010-07-01

    ...-to-eat cereal subcategory. 406.90 Section 406.90 Protection of Environment ENVIRONMENTAL PROTECTION AGENCY (CONTINUED) EFFLUENT GUIDELINES AND STANDARDS GRAIN MILLS POINT SOURCE CATEGORY Ready-to-Eat Cereal Subcategory § 406.90 Applicability; description of the ready-to-eat cereal subcategory....

  10. 40 CFR 406.90 - Applicability; description of the ready-to-eat cereal subcategory.

    Code of Federal Regulations, 2014 CFR

    2014-07-01

    ...-to-eat cereal subcategory. 406.90 Section 406.90 Protection of Environment ENVIRONMENTAL PROTECTION AGENCY (CONTINUED) EFFLUENT GUIDELINES AND STANDARDS GRAIN MILLS POINT SOURCE CATEGORY Ready-to-Eat Cereal Subcategory § 406.90 Applicability; description of the ready-to-eat cereal subcategory....

  11. 40 CFR 406.90 - Applicability; description of the ready-to-eat cereal subcategory.

    Code of Federal Regulations, 2013 CFR

    2013-07-01

    ...-to-eat cereal subcategory. 406.90 Section 406.90 Protection of Environment ENVIRONMENTAL PROTECTION AGENCY (CONTINUED) EFFLUENT GUIDELINES AND STANDARDS GRAIN MILLS POINT SOURCE CATEGORY Ready-to-Eat Cereal Subcategory § 406.90 Applicability; description of the ready-to-eat cereal subcategory....

  12. Determining the basis of nonhost resistance in rice to cereal rusts

    Technology Transfer Automated Retrieval System (TEKTRAN)

    Cereal rusts are a constant disease threat that limits the production of almost all agricultural cereals. Rice is atypical in that it is an intensively grown agricultural cereal that is immune to rust pathogens. This immunity is manifested by nonhost resistance (NHR), the mechanisms of which are poo...

  13. Exploiting the Brachypodium Tool Box in cereal and grass research

    Technology Transfer Automated Retrieval System (TEKTRAN)

    It is now a decade since Brachypodium distachyon was suggested as a model species for temperate grasses and cereals. Since then transformation protocols, large expressed sequence tag (EST) populations, tools for forward and reverse genetic screens, highly refined cytogenetic probes, germplasm coll...

  14. Assessment of grasshopper abundance in cereal crops using pan traps

    Technology Transfer Automated Retrieval System (TEKTRAN)

    Grasshoppers and locusts frequently invade cereal crops from adjacent source habitats. To protect the crops from grasshopper damage, areas bordering crop fields may be treated with insecticides. Study of grasshopper dispersal into crops and evaluation of various management alternatives is hindered b...

  15. Prospects for advancing defense to cereal rusts through genetical genomics

    Technology Transfer Automated Retrieval System (TEKTRAN)

    Rusts are one of the most severe threats for cereals because new races emerge regularly, typically resulting in infestations that lead to large yield losses. In 1999, a new race of stem rust, Puccinia graminis f. sp. tritici (Pgt TTKS or Ug99), was discovered in Uganda. Most of the wheat and barle...

  16. Resistant starch and dietary fibers from cereal by-products

    Technology Transfer Automated Retrieval System (TEKTRAN)

    Dried distillers grains (DDG) are a cereal byproduct from ethanol distillation process. On a dry weight basis, DDG is composed of 13% fat, 30% protein, 33% fiber, with the remainder various carbohydrates. Only 6-8% of starch in DDG is in resistant form (dietary fiber). Because only about 6% of DD...

  17. Modeling Winter Cereal Grain Canopies for Legume Intercrop Establishment

    Technology Transfer Automated Retrieval System (TEKTRAN)

    As energy demands continue to increase and wheat (Triticum aestivum L.) prices remain high, more North Central U.S. corn (Zea mays L.) and soybean [Glycine max (L.) Merr.] producers may convert some production acres to wheat. Including a winter cereal grain in the rotation increases the opportunity ...

  18. Cecil Cereal's Supermarket Search. Teacher's Guide [and] Student Materials.

    ERIC Educational Resources Information Center

    Estes, Cynthia

    The document presents objectives, teaching methods, activities, and work sheets for a unit on choosing breakfast cereal. The unit is intended to be used as an integral part of the fifth grade health program. Activities take place in a classroom learning center and can be completed in approximately four to six hours of classroom time. Objectives…

  19. Algorithms for in-season nutrient management in cereals

    Technology Transfer Automated Retrieval System (TEKTRAN)

    The demand for improved decision making products for cereal production systems has placed added emphasis on using plant sensors in-season, and that incorporate real-time, site specific, growing environments. The objective of this work was to describe validated in-season sensor based algorithms prese...

  20. Cereal Building (1926, Albert Kahn), with corner of Meat Products ...

    Library of Congress Historic Buildings Survey, Historic Engineering Record, Historic Landscapes Survey

    Cereal Building (1926, Albert Kahn), with corner of Meat Products Building at left, looking northeast from Heinz Street. Heinz Lofts archway added ca. 2005. The bridge in the rear connects to the Bean Building. - H.J. Heinz Company Factories, 300 Heinz Street, Pittsburgh, Allegheny County, PA

  1. RESPONSIVE IN-SEASON NITROGEN MANAGEMENT FOR CEREALS

    Technology Transfer Automated Retrieval System (TEKTRAN)

    In this review, we illustrate how traditional nitrogen (N) management schemes for worldwide cereal production systems have resulted in low N use efficiency (NUE), environmental contamination, and considerable debate regarding appropriate use of N fertilizers in crop production. Hence, development o...

  2. Factors Influencing Deoxynivalenol Accumulation in Small Grain Cereals

    PubMed Central

    Wegulo, Stephen N.

    2012-01-01

    Deoxynivalenol (DON) is a mycotoxin produced by the plant pathogenic fungi Fusarium graminearum and F. culmorum. These and other closely related fungi cause a disease known as Fusarium head blight (FHB) in small grain cereals. Other mycotoxins produced by FHB-causing fungi include nivalenol, T-2 toxin, and zearalenone. Ingestion of mycotoxin-contaminated food and feed can lead to toxicosis in humans and animals, respectively. DON is the predominant and most economically important of these mycotoxins in the majority of small grain-producing regions of the world. This review examines the factors that influence DON accumulation in small grain cereals from an agricultural perspective. The occurrence and economic importance of FHB and DON in small grain cereals, epidemiological factors and cereal production practices that favor FHB development and DON accumulation in grain under field conditions, and regulatory/advisory standards for DON in food and feed are discussed. This information can be used to develop strategies that reduce DON accumulation in grain before harvest and to mitigate the human and animal health risks associated with DON contamination of food and feed. PMID:23202310

  3. Fall Growth Potential of Cereal Grain Forages in Northern Arkansas

    Technology Transfer Automated Retrieval System (TEKTRAN)

    In Arkansas, producers utilizing cereal grains as fall forage for weaned calves usually do not harvest a grain crop the following summer. This contrasts sharply from practices observed commonly in neighboring Oklahoma, and allows for much wider latitude with respect to management strategies, especia...

  4. Polyphenols and antioxidant capacity: Rice versus other common cereal grains

    Technology Transfer Automated Retrieval System (TEKTRAN)

    The consumption of whole cereal grains has been strongly recommended by many governmental and non-profit health organizations based on epidemiological studies associating whole-grain consumption with reduced incidences of chronic diseases. Bioactive phytochemicals, such as polyphenolic compounds, ri...

  5. Mike Gale and cereal genetics research in China

    Technology Transfer Automated Retrieval System (TEKTRAN)

    Mike was one of the leading scientists in agricultural research internationally. The significant contributions he made to wheat linkage map construction, comparative genomics among cereals, and the cloning genes of agronomic importance made him prominent in wheat genetics and agricultural biotechnol...

  6. Image description with generalized pseudo-Zernike moments

    PubMed Central

    Xia, Ting; Zhu, Hongqing; Shu, Huazhong; Haigron, Pascal; Luo, Limin

    2007-01-01

    A new set of orthogonal moment functions for describing images is proposed. It is based on the generalized pseudo-Zernike polynomials that are orthogonal on the unit circle. The generalized pseudo-Zernike polynomials are scaled to ensure the numerical stability, and some properties are discussed. The performance of the proposed moments is analyzed in terms of image reconstruction capability and invariant character recognition accuracy. Experimental results demonstrate the superiority of generalized pseudo-Zernike moments compared with pseudo-Zernike and Chebyshev-Fourier moments in both noise-free and noisy conditions. PMID:17164842

  7. The generation of pseudo VSP data: Field data example

    SciTech Connect

    Ala`i, R.; Wapenaar, C.P.A.

    1994-12-31

    In this paper the authors review the method for the generation of VSP data from seismic surface measurements, the result being called the Pseudo VSP. A method is introduced for the verification of the correctness of the macro model by means of the Pseudo VSP generation technique (two-way wave field extrapolation operators). The Pseudo VSP generation method is a new method for the transformation with a numerical procedure of surface seismic data into vertical seismic profiles (VSP). The main objective of this paper is to present some examples of the Pseudo VSP method and its value in interpretation aspects on the Marmousi dataset and on field data.

  8. [Pseudo-radicular referred leg pain].

    PubMed

    von Heymann, W

    2015-12-01

    Pseudo-radicular leg pain as initially described by Bruegger more than 55 years ago was at that time a genius explanation for so many non-radicular pain syndromes that needed not any kind of surgical intervention but in first line a manual treatment or a treatment by therapeutic local anesthetics. Today we describe this pain as a "referred pain" originating from other anatomic structures that may occur during the development of chronic pain. Nevertheless this pain is found in many patients and it still seems to be a big problem for many physicians and surgeons. Imaging does not help either. The history and the clinical symptoms, the examinations, the chain reactions in the motor system as well as the treatment options from the point of view of manual medicine are described. PMID:26563144

  9. Anisotropic star on pseudo-spheroidal spacetime

    NASA Astrophysics Data System (ADS)

    Ratanpal, B. S.; Thomas, V. O.; Pandya, D. M.

    2016-02-01

    A new class of exact solutions of Einstein's field equations representing anisotropic distribution of matter on pseudo-spheroidal spacetime is obtained. The parameters appearing in the model are restricted through physical requirements of the model. It is found that the models given in the present work is compatible with observational data of a wide variety of compact objects like 4U 1820-30, PSR J1903+327, 4U 1608-52, Vela X-1, PSR J1614-2230, SMC X-4, Cen X-3. A particular model of pulsar PSR J1614-2230 is studied in detail and found that it satisfies all physical requirements needed for physically acceptable model.

  10. Pseudo-Z symmetric space-times

    SciTech Connect

    Mantica, Carlo Alberto; Suh, Young Jin

    2014-04-15

    In this paper, we investigate Pseudo-Z symmetric space-time manifolds. First, we deal with elementary properties showing that the associated form A{sub k} is closed: in the case the Ricci tensor results to be Weyl compatible. This notion was recently introduced by one of the present authors. The consequences of the Weyl compatibility on the magnetic part of the Weyl tensor are pointed out. This determines the Petrov types of such space times. Finally, we investigate some interesting properties of (PZS){sub 4} space-time; in particular, we take into consideration perfect fluid and scalar field space-time, and interesting properties are pointed out, including the Petrov classification. In the case of scalar field space-time, it is shown that the scalar field satisfies a generalized eikonal equation. Further, it is shown that the integral curves of the gradient field are geodesics. A classical method to find a general integral is presented.

  11. Flights in a pseudo-chaotic system

    NASA Astrophysics Data System (ADS)

    Lowenstein, J. H.; Vivaldi, F.

    2011-09-01

    We consider the problem of transport in a one-parameter family of piecewise rotations of the torus, for rotation number approaching 1/4. This is a zero-entropy system which in this limit exhibits a divided phase space, with island chains immersed in a "pseudo-chaotic" region. We identify a novel mechanism for long-range transport, namely the adiabatic destruction of accelerator-mode islands. This process originates from the approximate translational invariance of the phase space and leads to long flights of linear motion, for a significant measure of initial conditions. We show that the asymptotic probability distribution of the flight lengths is determined by the geometric properties of a partition of the accelerator-mode island associated with the flight. We establish the existence of flights travelling distances of order O(1) in phase space. We provide evidence for the existence of a scattering process that connects flights travelling in opposite directions.

  12. Pseudo Linear Attitude Determination of Spinning Spacecraft

    NASA Technical Reports Server (NTRS)

    Harman, Richard R.; Bar-Itzhack, Itzhack Y.

    2004-01-01

    This paper presents the overall mathematical model and results from pseudo linear recursive estimators of attitude and rate for a spinning spacecraft. The measurements considered are vector measurements obtained by sun-sensors, fixed head star trackers, horizon sensors, and three axis magnetometers. Two filters are proposed for estimating the attitude as well as the angular rate vector. One filter, called the q-Filter, yields the attitude estimate as a quaternion estimate, and the other filter, called the D-Filter, yields the estimated direction cosine matrix. Because the spacecraft is gyro-less, Euler's equation of angular motion of rigid bodies is used to enable the estimation of the angular velocity. A simpler Markov model is suggested as a replacement for Euler's equation in the case where the vector measurements are obtained at high rates relative to the spacecraft angular rate.

  13. Head related transfer function pseudo-stereophony

    NASA Technical Reports Server (NTRS)

    Begault, Durand R. (Inventor)

    1992-01-01

    An apparatus for producing pseudo-stereophonic sound from a monaural signal is discussed. The apparatus includes a monaural source that has a speaker placed in an anechoic room and has a sound output generated by the monaural signal. The second, third, fourth, and fifth speakers are placed in the anechoic room symmetrically about a listener. The monaural signal from the source is processed to output processed signals to each of the second, third, fourth, and fifth speakers, each speaker producing a sound output corresponding to the received processed signal. A pair of microphones is placed in the ears of the listener for receiving the sound outputs of the first, second, third, fourth, and fifth speakers and producing two differentiated audio channels.

  14. Long period pseudo random number sequence generator

    NASA Technical Reports Server (NTRS)

    Wang, Charles C. (Inventor)

    1989-01-01

    A circuit for generating a sequence of pseudo random numbers, (A sub K). There is an exponentiator in GF(2 sup m) for the normal basis representation of elements in a finite field GF(2 sup m) each represented by m binary digits and having two inputs and an output from which the sequence (A sub K). Of pseudo random numbers is taken. One of the two inputs is connected to receive the outputs (E sub K) of maximal length shift register of n stages. There is a switch having a pair of inputs and an output. The switch outputs is connected to the other of the two inputs of the exponentiator. One of the switch inputs is connected for initially receiving a primitive element (A sub O) in GF(2 sup m). Finally, there is a delay circuit having an input and an output. The delay circuit output is connected to the other of the switch inputs and the delay circuit input is connected to the output of the exponentiator. Whereby after the exponentiator initially receives the primitive element (A sub O) in GF(2 sup m) through the switch, the switch can be switched to cause the exponentiator to receive as its input a delayed output A(K-1) from the exponentiator thereby generating (A sub K) continuously at the output of the exponentiator. The exponentiator in GF(2 sup m) is novel and comprises a cyclic-shift circuit; a Massey-Omura multiplier; and, a control logic circuit all operably connected together to perform the function U(sub i) = 92(sup i) (for n(sub i) = 1 or 1 (for n(subi) = 0).

  15. Axiom turkey genotyping array

    Technology Transfer Automated Retrieval System (TEKTRAN)

    The Axiom®Turkey Genotyping Array interrogates 643,845 probesets on the array, covering 643,845 SNPs. The array development was led by Dr. Julie Long of the USDA-ARS Beltsville Agricultural Research Center under a public-private partnership with Hendrix Genetics, Aviagen, and Affymetrix. The Turk...

  16. Effect of gamma irradiation on viscosity reduction of cereal porridges for improving energy density

    NASA Astrophysics Data System (ADS)

    Lee, Ju-Woon; Kim, Jae-Hun; Oh, Sang-Hee; Byun, Eui-Hong; Yook, Hong-Sun; Kim, Mee-Ree; Kim, Kwan-Soo; Byun, Myung-Woo

    2008-03-01

    Cereal porridges have low energy and nutrient density because of its viscosity. The objective of the present study was to evaluate the effect of irradiation on the reduction of viscosity and on the increasing solid content of cereal porridge. Four cereals, wheat, rice, maize (the normal starchy type) and waxy rice, were used in this study. The porridge with 3000 cP was individually prepared from cereal flour, gamma-irradiated at 20 kGy and tested. Gamma irradiation of 20 kGy was allowed that the high viscous and rigid cereal porridges turned into semi-liquid consistencies. The solid contents of all porridges could increase by irradiation, compared with non-irradiated ones. No significant differences of starch digestibility were observed in all cereal porridge samples. The results indicated that gamma irradiation might be helpful for improving energy density of cereal porridge with acceptable consistency.

  17. Antioxidant properties of diverse cereal grains: A review on in vitro and in vivo studies.

    PubMed

    Masisi, Kabo; Beta, Trust; Moghadasian, Mohammed H

    2016-04-01

    Cereal grains and products have gained popularity in contributing to healthy eating behavior because of their antioxidant properties associated with protection against chronic diseases. In this review, notable studies on the in vitro and in vivo antioxidant activity of commonly consumed cereal grains are summarized. Cereals contain phytochemicals or certain minor components with antioxidant properties. The antioxidant potential of cereals depends on their bioaccessibility, absorption in the gastrointestinal and their bioavailability utilization in vivo. The in vitro gastrointestinal digestion and fermentation of cereals increased their antioxidant potentials which are significantly correlated with their total phenolic contents. Most studies performed in vivo have been concerned with the antioxidant properties of colored rice, wheat bran and rye products. There are inadequate in vitro and in vivo studies on antioxidative potentials of fermented versus unfermented cereals. Therefore, further studies are necessary to maximize possible health benefits of cereal antioxidative phytochemicals. PMID:26593469

  18. Responses of peripheral blood mononucleated cells from non-celiac gluten sensitive patients to various cereal sources.

    PubMed

    Valerii, Maria Chiara; Ricci, Chiara; Spisni, Enzo; Di Silvestro, Raffaella; De Fazio, Luigia; Cavazza, Elena; Lanzini, Alberto; Campieri, Massimo; Dalpiaz, Alessandro; Pavan, Barbara; Volta, Umberto; Dinelli, Giovanni

    2015-06-01

    Non-celiac gluten sensitivity (NCGS) is still an undefined syndrome whose triggering mechanisms remain unsettled. This study aimed to clarify how cultured peripheral blood mononucleated cells (PBMC) obtained from NCGS patients responded to contact with wheat proteins. Results demonstrated that wheat protein induced an overactivation of the proinflammatory chemokine CXCL10 in PBMC from NCGS patients, and that the overactivation level depends on the cereal source from which proteins are obtained. CXCL10 is able to decrease the transepithelial resistance of monolayers of normal colonocytes (NCM 460) by diminishing the mRNA expression of cadherin-1 (CDH1) and tight junction protein 2 (TJP2), two primary components of the tight junction strands. Thus, CXCL10 overactivation is one of the mechanisms triggered by wheat proteins in PBMC obtained from NCGS patients. This mechanism is activated to a greater extent by proteins from modern with respect to those extracted from ancient wheat genotypes. PMID:25624220

  19. Tarzan Helps to Find Dyslexics: A Pseudo-Word Test

    ERIC Educational Resources Information Center

    Takala, Marjatta; Kuusela, Jorma

    2009-01-01

    A pseudo-word test called Tarzan will be presented and standard scores for high school-aged students between 16 and 18 will be suggested. The test uses E. R. Burroughs' text, in which pseudo-words are added in order to study phonological coding and, through that, possible dyslexia. Girls performed better on the test and their scores correlated…

  20. Pseudo Hermitian formulation of the quantum Black-Scholes Hamiltonian

    NASA Astrophysics Data System (ADS)

    Jana, T. K.; Roy, P.

    2012-04-01

    We show that the non-Hermitian Black-Scholes Hamiltonian and its various generalizations are η-pseudo Hermitian. The metric operator η is explicitly constructed for this class of Hamiltonians. It is also shown that the effective Black-Scholes Hamiltonian and its partner form a pseudo supersymmetric system.

  1. Degeneracy of energy levels of pseudo-Gaussian oscillators

    SciTech Connect

    Iacob, Theodor-Felix; Iacob, Felix; Lute, Marina

    2015-12-07

    We study the main features of the isotropic radial pseudo-Gaussian oscillators spectral properties. This study is made upon the energy levels degeneracy with respect to orbital angular momentum quantum number. In a previous work [6] we have shown that the pseudo-Gaussian oscillators belong to the class of quasi-exactly solvable models and an exact solution has been found.

  2. Comparative Transcriptional Profiling of Two Wheat Genotypes, with Contrasting Levels of Minerals in Grains, Shows Expression Differences during Grain Filling

    PubMed Central

    Singh, Sudhir P.; Jeet, Raja; Kumar, Jitendra; Shukla, Vishnu; Srivastava, Rakesh; Mantri, Shrikant S.; Tuli, Rakesh

    2014-01-01

    Wheat is one of the most important cereal crops in the world. To identify the candidate genes for mineral accumulation, it is important to examine differential transcriptome between wheat genotypes, with contrasting levels of minerals in grains. A transcriptional comparison of developing grains was carried out between two wheat genotypes- Triticum aestivum Cv. WL711 (low grain mineral), and T. aestivum L. IITR26 (high grain mineral), using Affymetrix GeneChip Wheat Genome Array. The study identified a total of 580 probe sets as differentially expressed (with log2 fold change of ≥2 at p≤0.01) between the two genotypes, during grain filling. Transcripts with significant differences in induction or repression between the two genotypes included genes related to metal homeostasis, metal tolerance, lignin and flavonoid biosynthesis, amino acid and protein transport, vacuolar-sorting receptor, aquaporins, and stress responses. Meta-analysis revealed spatial and temporal signatures of a majority of the differentially regulated transcripts. PMID:25364903

  3. Mass genotyping by sequencing technology

    Technology Transfer Automated Retrieval System (TEKTRAN)

    Large scale genotyping of a moderate number of loci is cost prohibitive with current chip-based technologies. We demonstrate the ability to use next generation sequencing technologies to genotype many DNA samples for a moderate number of loci – a mass genotyping by sequencing technology (MGST). Ou...

  4. PseudoBase++: an extension of PseudoBase for easy searching, formatting and visualization of pseudoknots

    PubMed Central

    Taufer, Michela; Licon, Abel; Araiza, Roberto; Mireles, David; van Batenburg, F. H. D.; Gultyaev, Alexander P.; Leung, Ming-Ying

    2009-01-01

    Pseudoknots have been recognized to be an important type of RNA secondary structures responsible for many biological functions. PseudoBase, a widely used database of pseudoknot secondary structures developed at Leiden University, contains over 250 records of pseudoknots obtained in the past 25 years through crystallography, NMR, mutational experiments and sequence comparisons. To promptly address the growing analysis requests of the researchers on RNA structures and bring together information from multiple sources across the Internet to a single platform, we designed and implemented PseudoBase++, an extension of PseudoBase for easy searching, formatting and visualization of pseudoknots. PseudoBase++ (http://pseudobaseplusplus.utep.edu) maps the PseudoBase dataset into a searchable relational database including additional functionalities such as pseudoknot type. PseudoBase++ links each pseudoknot in PseudoBase to the GenBank record of the corresponding nucleotide sequence and allows scientists to automatically visualize RNA secondary structures with PseudoViewer. It also includes the capabilities of fine-grained reference searching and collecting new pseudoknot information. PMID:18988624

  5. Root system architecture: insights from Arabidopsis and cereal crops

    PubMed Central

    Smith, Stephanie; De Smet, Ive

    2012-01-01

    Roots are important to plants for a wide variety of processes, including nutrient and water uptake, anchoring and mechanical support, storage functions, and as the major interface between the plant and various biotic and abiotic factors in the soil environment. Understanding the development and architecture of roots holds potential for the exploitation and manipulation of root characteristics to both increase food plant yield and optimize agricultural land use. This theme issue highlights the importance of investigating specific aspects of root architecture in both the model plant Arabidopsis thaliana and (cereal) crops, presents novel insights into elements that are currently hardly addressed and provides new tools and technologies to study various aspects of root system architecture. This introduction gives a broad overview of the importance of the root system and provides a snapshot of the molecular control mechanisms associated with root branching and responses to the environment in A. thaliana and cereal crops. PMID:22527386

  6. [Polycyclic aromatic hydrocarbons (PAH) in cereal breakfast products].

    PubMed

    Ciemniak, Artur; Chrachol, Lucyna

    2008-01-01

    Polycyclic aromatic hydrocarbons (PAHs) are ubiquitous pollutants formed by incomplete combustion (pyrolysis) of several organic materials. PAHs occur as complex mixtures, never as individual components. They are chemically stable and highly lipophilic in nature and occur as contaminants in different food categories: vegetables, fruit, cereals, oils and fats, especially barbecued and smoked food. The present study was carried out to determine 16 PAHs in cereal products: musli, corn, oats and barley flakes, and crunchy. The analytical procedure was based on alkaline digestion, extraction with n-hexane and cleaned up in a florisil cartridge. Chromatographic separation was performed using gas chromatography (HP 6890) coupled to mass spectrometry (HP 5973). The levels of PAHs in most samples were generally low and excepting one sample of bred varied between 4.2 to 169 microg/kg. Benzo[a]pyrene, was detected in all samples, at level 0.02 microg/kg to 16 microg/kg. PMID:19143427

  7. La tuberculose abdominale pseudo-tumorale

    PubMed Central

    El Barni, Rachid; Lahkim, Mohamed; Achour, Abdessamad

    2012-01-01

    Introduction L’objectif de ce travail est de rapporter cinq cas de tuberculose abdominale pseudo-tumorale afin d’en souligner les aspects diagnostiques et thérapeutiques. Cinq observations sont colligées dans le service de chirurgie générale de l’hôpital militaire Avicenne de Marrakech au cours de l’année 2007. Les aspects cliniques sont disparates. Ainsi, les auteurs ont noté un syndrome péritonéal dans un cas, une masse épigastrique dans un cas, une lésion suspect du sigmoïde dans un cas, une masse de la fosse iliaque droite dans un cas et une altération de l’état général avec fièvre dans le dernier cas. Un seul patient avaient bénéficié d’une biopsie scano-guidée et les quatre patients restants avaient été opérés. Une masse du méso côlon était notée dans le premier cas. Dans le second cas, l’aspect de la masse épigastrique et son siège avaient orienté vers une tumeur du grand omentum. Une localisation tuberculeuse péritonéale et sigmoïdienne avait été trouvée dans le troisième cas. Le diagnostic d’une tumeur du côlon droit était hautement suspect chez le patient séropositif qui avait présenté une péritonite post-opératoire et décédé à J + 3 dans un tableau de choc septique. Le siège et l’aspect nécrotique des lésions trouvées à la tomodensitométrie chez la seule patiente de l’étude avaient fait discuter en premier un lymphome. Même en l’absence d’antécédents de tuberculose pulmonaire, le diagnostic tuberculose abdominale pseudo-tumorale doit être évoqué surtout dans un pays d’endémie comme le notre et le recours à une laparotomie est justifié chaque fois que persiste un doute diagnostique ou en cas de complication. PMID:23330023

  8. A need for determination of arsenic species at low levels in cereal-based food and infant cereals. Validation of a method by IC-ICPMS.

    PubMed

    Llorente-Mirandes, Toni; Calderón, Josep; Centrich, Francesc; Rubio, Roser; López-Sánchez, José Fermín

    2014-03-15

    The present study arose from the need to determine inorganic arsenic (iAs) at low levels in cereal-based food. Validated methods with a low limit of detection (LOD) are required to analyse these kinds of food. An analytical method for the determination of iAs, methylarsonic acid (MA) and dimethylarsinic acid (DMA) in cereal-based food and infant cereals is reported. The method was optimised and validated to achieve low LODs. Ion chromatography-inductively coupled plasma mass spectrometry (IC-ICPMS) was used for arsenic speciation. The main quality parameters were established. To expand the applicability of the method, different cereal products were analysed: bread, biscuits, breakfast cereals, wheat flour, corn snacks, pasta and infant cereals. The total and inorganic arsenic content of 29 cereal-based food samples ranged between 3.7-35.6 and 3.1-26.0 μg As kg(-1), respectively. The present method could be considered a valuable tool for assessing inorganic arsenic contents in cereal-based foods. PMID:24206733

  9. Alternative futures for world cereal and meat consumption.

    PubMed

    Rosegrant, M W; Leach, N; Gerpacio, R V

    1999-05-01

    Fundamental changes in the global structure of food demand will lead to an extraordinary increase in the importance of developing countries in global food markets. Economic growth in developing countries is changing consumption patterns, with slower growth (and in many countries actual declines) in per capita food consumption of grains and rapidly growing per capita and total meat consumption, combined with induced growth in cereal feed consumption. The present paper examines the hypothesis, suggested by some researchers, that high-meat diets in developed countries limit improvement in food security in developing countries. These analysts argue that reduced meat consumption in developed countries would release cereals from livestock feed to food for poorer populations, thus improving food security in developing countries. Using the International Food Policy Research Institute (Washington, DC, USA) global food projections model, the international model for policy analysis of agricultural commodities and trade (see Rosegrant et al. 1995), we first analyse the implications for future global cereal and meat supply and demand resulting from changes in global income, population growth and other structural changes, then simulate alternative scenarios to examine the effect of large reductions in meat consumption in developed countries on food consumption and food security in developing countries. The paper shows that while the long-term prospects for food supply, demand and trade indicate a strengthening of world cereal and livestock markets, the improvement in food security in the developing world will be slow, and changes in the dietary patterns in developed countries are not an effective route to improvement in food security in developing countries. PMID:10466160

  10. Reducing the potential for processing contaminant formation in cereal products

    PubMed Central

    Curtis, Tanya Y.; Postles, Jennifer; Halford, Nigel G.

    2014-01-01

    Processing contaminants may be defined as substances that are produced in a food when it is cooked or processed, are not present or are present at much lower concentrations in the raw, unprocessed food, and are undesirable either because they have an adverse effect on product quality or because they are potentially harmful. The presence of very low levels of processing contaminants in common foods is becoming an increasingly important issue for the food industry, as developments in analytical techniques and equipment bring foods under closer and closer scrutiny. This review considers the formation of lipid oxidation products, hydrogenation of polyunsaturated fatty acids to prevent lipid oxidation and the associated risk of trans fatty acid formation. The formation of acrylamide in the Maillard reaction is described, as well as the genetic and agronomic approaches being taken to reduce the acrylamide-forming potential of cereal grain. The multiple routes for the formation of furan and associated chemicals, including hydroxymethylfurfuryl, are also described. The evolving regulatory and public perception situations for these processing contaminants and their implications for the cereal supply chain are discussed, emphasising the need for cereal breeders to engage with the contaminants issue. PMID:24882936

  11. Gamma irradiation treatment of cereal grains for chick diets

    SciTech Connect

    Campbell, G.L.; Classen, H.L.; Ballance, G.M.

    1986-04-01

    Wheat (W), triticale (T), hulled barley (HB), hull-less barley (HLB), hulled oats (HO), and hull-less oats (HLO) were gamma irradiated (/sup 60/Co) at 0, 3, 6 and 9 Mrad to study the effect of irradiation on the nutritional value of cereal grains for chicks. A significant curvilinear relationship between radiation dose and 3-wk body weight of chicks fed irradiated cereals was noted for T, HB, HLB, HO and HLO. Chicks fed W or T showed no effect or lower body weight, respectively, while body weights of chicks fed barley or oat samples were higher with irradiation. The improvement tended to be maximal at the 6 Mrad level. Irradiation significantly improved the gain-to-feed ratio for chicks fed either HO or HLO. Apparent fat retention and tibia ash were higher in chicks fed irradiated HLO than in those fed untreated HLO. In a second experiment chick body weight, apparent amino acid and fat retention, tibia ash, and gain-to-feed ratios were lower in chicks fed autoclaved (121 degrees C for 20 min) barley than in those fed untreated barley. Irradiation (6 Mrad) subsequent to autoclaving barley samples eliminated these effects. Irradiation appears to benefit cereals containing soluble or mucilagenous fiber types as typified by beta-glucan of barley and oats. These fibers appear prone to irradiation-induced depolymerization, as suggested by increased beta-glucan solubility and reduced extract viscosity for irradiated barley and oat samples.

  12. Cadmium-tolerant bacteria induce metal stress tolerance in cereals.

    PubMed

    Ahmad, Iftikhar; Akhtar, Muhammad Javed; Zahir, Zahir Ahmad; Naveed, Muhammad; Mitter, Birgit; Sessitsch, Angela

    2014-09-01

    Cadmium usually hampers plant growth, but bacterial inoculation may improve stress tolerance in plants to Cd by involving various mechanisms. The objective was to characterize and identify bacteria that improve plant growth under Cd stress and reduce Cd uptake. Cadmium-tolerant bacteria were isolated from rhizosphere soil, which was irrigated with tannery effluent, and six strains were selected as highly tolerant to Cd, showing minimum inhibitory concentration as 500 mg L(-1) or 4.45 mmol L(-1). These strains were identified by 16S rRNA gene analysis and functional analysis in regard to plant growth promotion characteristics. To determine their effect on cereal growth under Cd stress, seeds were inoculated with these strains individually and grown in soil contaminated with three Cd levels (0, 40 and 80 mg kg(-1)). Biomass production, relative water content (RWC), electrolyte leakage (ELL) and tissue Cd concentration were measured. Biomass of both cereals was inhibited strongly when exposed to Cd; however, bacterial inoculation significantly reduced the suppressive effect of Cd on cereal growth and physiology. The bacterial isolates belonged to the genera Klebsiella, Stenotrophomonas, Bacillus and Serratia. Maize was more sensitive than wheat to Cd. Klebsiella sp. strain CIK-502 had the most pronounced effects in promoting maize and wheat growth and lowering Cd uptake under Cd stress. PMID:24849374

  13. Phenolic Compounds of Cereals and Their Antioxidant Capacity.

    PubMed

    Van Hung, Pham

    2016-01-01

    Phenolic compounds play an important role in health benefits because of their highly antioxidant capacity. In this review, total phenolic contents (TPCs), phenolic acid profile and antioxidant capacity of the extracted from wheat, corn, rice, barley, sorghum, rye, oat, and millet, which have been recently reported, are summarized. The review shows clearly that cereals contain a number of phytochemicals including phenolics, flavonoids, anthocyanins, etc. The phytochemicals of cereals significantly exhibit antioxidant activity as measured by trolox equivalent antioxidant capacity (TEAC), 2,2-diphenyl-1-picrylhydrazyl radical scavenging, reducing power, oxygen radical absorbance capacity (ORAC), inhibition of oxidation of human low-density lipoprotein (LDL) cholesterol and DNA, Rancimat, inhibition of photochemilumenescence (PCL), and iron(II) chelation activity. Thus, the consumption of whole grains is considered to have significantly health benefits in prevention from chronic diseases such as cardiovascular disease, diabetes, and cancer because of the contribution of phenolic compounds existed. In addition, the extracts from cereal brans are considered to be used as a source of natural antioxidants. PMID:25075608

  14. Pseudo-Gabor wavelet for face recognition

    NASA Astrophysics Data System (ADS)

    Xie, Xudong; Liu, Wentao; Lam, Kin-Man

    2013-04-01

    An efficient face-recognition algorithm is proposed, which not only possesses the advantages of linear subspace analysis approaches-such as low computational complexity-but also has the advantage of a high recognition performance with the wavelet-based algorithms. Based on the linearity of Gabor-wavelet transformation and some basic assumptions on face images, we can extract pseudo-Gabor features from the face images without performing any complex Gabor-wavelet transformations. The computational complexity can therefore be reduced while a high recognition performance is still maintained by using the principal component analysis (PCA) method. The proposed algorithm is evaluated based on the Yale database, the Caltech database, the ORL database, the AR database, and the Facial Recognition Technology database, and is compared with several different face recognition methods such as PCA, Gabor wavelets plus PCA, kernel PCA, locality preserving projection, and dual-tree complex wavelet transformation plus PCA. Experiments show that consistent and promising results are obtained.

  15. Pseudo-interactive monitoring in distributed computing

    SciTech Connect

    Sfiligoi, I.; Bradley, D.; Livny, M.; /Wisconsin U., Madison

    2009-05-01

    Distributed computing, and in particular Grid computing, enables physicists to use thousands of CPU days worth of computing every day, by submitting thousands of compute jobs. Unfortunately, a small fraction of such jobs regularly fail; the reasons vary from disk and network problems to bugs in the user code. A subset of these failures result in jobs being stuck for long periods of time. In order to debug such failures, interactive monitoring is highly desirable; users need to browse through the job log files and check the status of the running processes. Batch systems typically don't provide such services; at best, users get job logs at job termination, and even this may not be possible if the job is stuck in an infinite loop. In this paper we present a novel approach of using regular batch system capabilities of Condor to enable users to access the logs and processes of any running job. This does not provide true interactive access, so commands like vi are not viable, but it does allow operations like ls, cat, top, ps, lsof, netstat and dumping the stack of any process owned by the user; we call this pseudo-interactive monitoring. It is worth noting that the same method can be used to monitor Grid jobs in a glidein-based environment. We further believe that the same mechanism could be applied to many other batch systems.

  16. Development of Combined Drought Indicator in Cereals to use its predictive value in the Agricultural Insurances: CDI_Cereal

    NASA Astrophysics Data System (ADS)

    Jimenez-Donaire, Pilar; Tarquis, Ana M.; Giráldez, Juan V.

    2015-04-01

    The agrometeorological or agricultural drought is one of the most severe problems of agriculture. Drought damage is defined in terms of harvest loss due to precipitation shortage that limits soil moisture availability for the crops, substantially reducing crop yield. A method is proposed to identify the rain fed cereal agricultural drought in several Andalusian regions, based on the combination of three indices or anomalies: (i) standard precipitation index (SPI-3) based on Mishra and Desai (2005), (ii) soil moisture described with a water balance model based on the hydrological model by Brocca et al., 2008, and (iii) the normalized difference vegetation index (NDVI) based on Kogan (1995). Coupling the three anomalies, a Combined Drought Indicator -for rain fed cereals- (CDI) has been obtained. This indicator characterizes different warning levels of agricultural drought, which has been successfully assessed with the data of the period 2003-2013 (Jiménez-Donaire, 2014). The final aim of the proposed CDI is to design a warning system based on its components' combination to forecast the drought risk helping both farmers and agricultural insurance agencies. Keywords: drought, SPI, soil moisture, NDVI. References Brocca, L., Melone, F., Moramarco, T.(2008) On the estimation of antecedent wetness conditions in rainfall-runoff modelling. Hydrol. Process. 22, 629-642. Jiménez-Donaire, M.P. (2014) Indicador combinado de sequía para cereales y su valor predictivo en los seguros agrarios: ICS_CEREAL. Master thesis, UCO (In Spanish). Kogan, F.N., 1995. Droughts of the Late 1980s in the United States as Derived from NOAA Polar-Orbiting Satellite Data. Bull. Am. Meteorol. Soc. 76, 655-668. Mishra, A.K., Desai, V.R., 2005. Drought forecasting using stochastic models. Stoch. Environ. Res. Risk Assess. 19, 326-339. Acknowledgements First author acknowledges the Research Grant obtained from CEIGRAM in 2014

  17. Neutron activation analysis for Dy, Hf, Rb, Sc and Se in some Ghanaian cereals and vegetables using short-lived nuclides and Compton suppression spectrometry.

    PubMed

    Nyarko, B J B; Akaho, E H K; Fletcher, J J; Chatt, A

    2008-08-01

    A pseudo-cyclic instrumental neutron activation analysis (PCINAA) method has been developed to determine selected elements in various types of cereal and vegetable from Ghana using relatively short-lived nuclides (t1/2<80 s) and the Compton suppression counting. The samples were irradiated for 10 s at the Dalhousie University SLOWPOKE-2 research reactor facility (DUSR) and allowed to decay for 20 s, and counted for 40 s. The process is repeated every 50 s for 4 cycles to quantify Dy, Hf, Rb, Sc and Se through 165mDy, 179Hf, 86mRb, 46mSc, and 77mSe. The detection limits were generally of the order of 1.0 ng g(-1) except for Rb which is about 1 microg g(-1). Both precision and accuracy of the method were found to be good. PMID:18424050

  18. Variation for N Uptake System in Maize: Genotypic Response to N Supply.

    PubMed

    Garnett, Trevor; Plett, Darren; Conn, Vanessa; Conn, Simon; Rabie, Huwaida; Rafalski, J Antoni; Dhugga, Kanwarpal; Tester, Mark A; Kaiser, Brent N

    2015-01-01

    An understanding of the adaptations made by plants in their nitrogen (N) uptake systems in response to reduced N supply is important to the development of cereals with enhanced N uptake efficiency (NUpE). Twenty seven diverse genotypes of maize (Zea mays, L.) were grown in hydroponics for 3 weeks with limiting or adequate N supply. Genotypic response to N was assessed on the basis of biomass characteristics and the activities of the nitrate ([Formula: see text]) and ammonium ([Formula: see text]) high-affinity transport systems. Genotypes differed greatly for the ability to maintain biomass with reduced N. Although, the N response in underlying biomass and N transport related characteristics was less than that for biomass, there were clear relationships, most importantly, lines that maintained biomass at reduced N maintained net N uptake with no change in size of the root relative to the shoot. The root uptake capacity for both [Formula: see text] and [Formula: see text] increased with reduced N. Transcript levels of putative [Formula: see text] and [Formula: see text] transporter genes in the root tissue of a subset of the genotypes revealed that predominately ZmNRT2 transcript levels responded to N treatments. The correlation between the ratio of transcripts of ZmNRT2.2 between the two N levels and a genotype's ability to maintain biomass with reduced N suggests a role for these transporters in enhancing NUpE. The observed variation in the ability to capture N at low N provides scope for both improving NUpE in maize and also to better understand the N uptake system in cereals. PMID:26617612

  19. Variation for N Uptake System in Maize: Genotypic Response to N Supply

    PubMed Central

    Garnett, Trevor; Plett, Darren; Conn, Vanessa; Conn, Simon; Rabie, Huwaida; Rafalski, J. Antoni; Dhugga, Kanwarpal; Tester, Mark A.; Kaiser, Brent N.

    2015-01-01

    An understanding of the adaptations made by plants in their nitrogen (N) uptake systems in response to reduced N supply is important to the development of cereals with enhanced N uptake efficiency (NUpE). Twenty seven diverse genotypes of maize (Zea mays, L.) were grown in hydroponics for 3 weeks with limiting or adequate N supply. Genotypic response to N was assessed on the basis of biomass characteristics and the activities of the nitrate (NO3−) and ammonium (NH4+) high-affinity transport systems. Genotypes differed greatly for the ability to maintain biomass with reduced N. Although, the N response in underlying biomass and N transport related characteristics was less than that for biomass, there were clear relationships, most importantly, lines that maintained biomass at reduced N maintained net N uptake with no change in size of the root relative to the shoot. The root uptake capacity for both NO3− and NH4+ increased with reduced N. Transcript levels of putative NO3− and NH4+ transporter genes in the root tissue of a subset of the genotypes revealed that predominately ZmNRT2 transcript levels responded to N treatments. The correlation between the ratio of transcripts of ZmNRT2.2 between the two N levels and a genotype's ability to maintain biomass with reduced N suggests a role for these transporters in enhancing NUpE. The observed variation in the ability to capture N at low N provides scope for both improving NUpE in maize and also to better understand the N uptake system in cereals. PMID:26617612

  20. On a projectively invariant pseudo-distance in Finsler geometry

    NASA Astrophysics Data System (ADS)

    Bidabad, Behroz; Sepasi, Maryam

    2015-03-01

    Here, a nonlinear analysis method is applied rather than classical one to study projective changes of Finsler metrics. More intuitively, a projectively invariant pseudo-distance is introduced and characterized with respect to the Ricci tensor and its covariant derivatives.

  1. Pseudo-Dirac Dark Matter Leaves a Trace

    SciTech Connect

    De Simone, Andrea; Sanz, Veronica; Sato, Hiromitsu Phil

    2010-09-17

    Pseudo-Dirac dark matter is a viable type of dark matter which originates from a new Dirac fermion whose two Weyl states get slightly split in mass by a small Majorana term. The decay of the heavier to the lighter state naturally occurs over a detectable length scale. Thus, whenever pseudo-Dirac dark matter is produced in a collider, it leaves a clear trace: a visible displaced vertex in association with missing energy. Moreover, pseudo-Dirac dark matter behaves Dirac-like for relic abundance and Majorana-like in direct detection experiments. We provide a general effective field theory treatment, specializing to a pseudo-Dirac bino. The dark matter mass and the mass splitting can be extracted from measurements of the decay length and the invariant mass of the products, even in the presence of missing energy.

  2. Pseudo-Dirac dark matter leaves a trace.

    PubMed

    De Simone, Andrea; Sanz, Veronica; Sato, Hiromitsu Phil

    2010-09-17

    Pseudo-Dirac dark matter is a viable type of dark matter which originates from a new Dirac fermion whose two Weyl states get slightly split in mass by a small Majorana term. The decay of the heavier to the lighter state naturally occurs over a detectable length scale. Thus, whenever pseudo-Dirac dark matter is produced in a collider, it leaves a clear trace: a visible displaced vertex in association with missing energy. Moreover, pseudo-Dirac dark matter behaves Dirac-like for relic abundance and Majorana-like in direct detection experiments. We provide a general effective field theory treatment, specializing to a pseudo-Dirac bino. The dark matter mass and the mass splitting can be extracted from measurements of the decay length and the invariant mass of the products, even in the presence of missing energy. PMID:20867629

  3. Finite block pseudo-spin approach of proton glass

    NASA Astrophysics Data System (ADS)

    Lee, Kwang-Sei; Koo, Je Huan; Lee, Cheol Eui

    2016-08-01

    We herein propose an alternative phenomenology to explain the phase of proton glass by reference to finite block spin theory in magnetism, in which the phase may be considered as being a short-range ferroelectric ordering of block pseudo-spins comprised of random pseudo-spins that have a majority of individual pseudo-spins in a given sense. By making use of the Curie law of block pseudo-spins, we obtained the dielectric susceptibility for the lower and higher temperature approximations of the Brillouin function. The experimental results for the susceptibility in hydrogen-bonded mixed crystals of ferroelectric RbH2P(As)O4 and antiferroelectric NH4H2P(As)O4 were thus fitted fairly well at low temperatures in the proton glass phase whereas some deviation from our formulation was seen at high temperatures in the paraelectric phase.

  4. A pseudo-icosahedral cage {Gd12} based on aminomethylphosphonate.

    PubMed

    Zhang, Ze-Min; Zangana, Karzan H; Kostopoulos, Andreas K; Tong, Ming-Liang; Winpenny, Richard E P

    2016-05-31

    Reaction of (aminomethyl)phosphonic acid (ampH2) with a mixture of gadolinium and cobalt pivalates under solvothermal conditions, led to a pseudo-icosahedral cage {Gd12}, which shows a large magnetocaloric effect (MCE). PMID:27188600

  5. Pseudo-Outbreak of Actinomyces graevenitzii Associated with Bronchoscopy

    PubMed Central

    Peaper, David R.; Havill, Nancy L.; Aniskiewicz, Michael; Callan, Deborah; Pop, Olivia; Towle, Dana

    2014-01-01

    Outbreaks and pseudo-outbreaks of infection related to bronchoscopy typically involve Gram-negative bacteria, Mycobacterium species or Legionella species. We report an unusual bronchoscopy-related pseudo-outbreak due to Actinomyces graevenitzii. Extensive epidemiological and microbiological investigation failed to identify a common source. Strain typing revealed that the cluster was comprised of heterogeneous strains of A. graevenitzii. A change in laboratory procedures for Actinomyces cultures was coincident with the emergence of the pseudo-outbreak, and we determined that A. graevenitzii isolates more readily adopted a white, dry, molar tooth appearance on anaerobic colistin nalidixic acid (CNA) agar which likely facilitated its detection and identification in bronchoscopic specimens. This unusual pseudo-outbreak was related to frequent requests of bronchoscopists for Actinomyces cultures combined with a change in microbiology laboratory practices. PMID:25355767

  6. Mycotic pseudo-aneurysm of the extracranial carotid artery.

    PubMed

    Desimpelaere, J; Seynaeve, P; Kockx, M; Appel, B; Gyselinck, J; Mortelmans, L

    1997-08-01

    A rare case of mycotic pseudo-aneurysm of the common carotid artery as a complication in an immunosuppressed paediatric patient is presented. Treatment of pseudo-aneurysms of the common carotid artery is generally considered to be an emergency, necessitating quick and accurate diagnosis. In patients with septicemia, angiography has to be avoided. We were able to provide the surgeon with the exact diagnosis and accurate topographical information with helical CT with 3D reformation. PMID:9351308

  7. Saturated linkage map construction in Rubus idaeus using genotyping by sequencing and genome-independent imputation

    PubMed Central

    2013-01-01

    Background Rapid development of highly saturated genetic maps aids molecular breeding, which can accelerate gain per breeding cycle in woody perennial plants such as Rubus idaeus (red raspberry). Recently, robust genotyping methods based on high-throughput sequencing were developed, which provide high marker density, but result in some genotype errors and a large number of missing genotype values. Imputation can reduce the number of missing values and can correct genotyping errors, but current methods of imputation require a reference genome and thus are not an option for most species. Results Genotyping by Sequencing (GBS) was used to produce highly saturated maps for a R. idaeus pseudo-testcross progeny. While low coverage and high variance in sequencing resulted in a large number of missing values for some individuals, a novel method of imputation based on maximum likelihood marker ordering from initial marker segregation overcame the challenge of missing values, and made map construction computationally tractable. The two resulting parental maps contained 4521 and 2391 molecular markers spanning 462.7 and 376.6 cM respectively over seven linkage groups. Detection of precise genomic regions with segregation distortion was possible because of map saturation. Microsatellites (SSRs) linked these results to published maps for cross-validation and map comparison. Conclusions GBS together with genome-independent imputation provides a rapid method for genetic map construction in any pseudo-testcross progeny. Our method of imputation estimates the correct genotype call of missing values and corrects genotyping errors that lead to inflated map size and reduced precision in marker placement. Comparison of SSRs to published R. idaeus maps showed that the linkage maps constructed with GBS and our method of imputation were robust, and marker positioning reliable. The high marker density allowed identification of genomic regions with segregation distortion in R. idaeus, which

  8. Identification of differentially expressed genes between sorghum genotypes with contrasting nitrogen stress tolerance by genome-wide transcriptional profiling

    PubMed Central

    2014-01-01

    Background Sorghum is an important cereal crop, which requires large quantities of nitrogen fertilizer for achieving commercial yields. Identification of the genes responsible for low-N tolerance in sorghum will facilitate understanding of the molecular mechanisms of low-N tolerance, and also facilitate the genetic improvement of sorghum through marker-assisted selection or gene transformation. In this study we compared the transcriptomes of root tissues from seven sorghum genotypes having differential response to low-N stress. Results Illumina RNA-sequencing detected several common differentially expressed genes (DEGs) between four low-N tolerant sorghum genotypes (San Chi San, China17, KS78 and high-NUE bulk) and three sensitive genotypes (CK60, BTx623 and low-NUE bulk). In sensitive genotypes, N-stress increased the abundance of DEG transcripts associated with stress responses including oxidative stress and stimuli were abundant. The tolerant genotypes adapt to N deficiency by producing greater root mass for efficient uptake of nutrients. In tolerant genotypes, higher abundance of transcripts related to high affinity nitrate transporters (NRT2.2, NRT2.3, NRT2.5, and NRT2.6) and lysine histidine transporter 1 (LHT1), may suggest an improved uptake efficiency of inorganic and organic forms of nitrogen. Higher abundance of SEC14 cytosolic factor family protein transcript in tolerant genotypes could lead to increased membrane stability and tolerance to N-stress. Conclusions Comparison of transcriptomes between N-stress tolerant and sensitive genotypes revealed several common DEG transcripts. Some of these DEGs were evaluated further by comparing the transcriptomes of genotypes grown under full N. The DEG transcripts showed higher expression in tolerant genotypes could be used for transgenic over-expression in sensitive genotypes of sorghum and related crops for increased tolerance to N-stress, which results in increased nitrogen use efficiency for sustainable

  9. Convergent dental adaptations in pseudo-tribosphenic and tribosphenic mammals.

    PubMed

    Luo, Zhe-Xi; Ji, Qiang; Yuan, Chong-Xi

    2007-11-01

    Tribosphenic molars of basal marsupials and placentals are a major adaptation, with the protocone (pestle) of the upper molar crushing and grinding in the talonid basin (mortar) on the lower molar. The extinct pseudo-tribosphenic mammals have a reversed tribosphenic molar in which a pseudo-talonid is anterior to the trigonid, to receive the pseudo-protocone of the upper molar. The pseudo-protocone is analogous to the protocone, but the anteriorly placed pseudo-talonid is opposite to the posterior talonid basin of true tribosphenic mammals. Here we describe a mammal of the Middle Jurassic period with highly derived pseudo-tribosphenic molars but predominantly primitive mandibular and skeletal features, and place it in a basal position in mammal phylogeny. Its shoulder girdle and limbs show fossorial features similar to those of mammaliaforms and monotremes, but different compared with those of the earliest-known Laurasian tribosphenic (boreosphenid) mammals. The find reveals a much greater range of dental evolution in Mesozoic mammals than in their extant descendants, and strengthens the hypothesis of homoplasy of 'tribosphenic-like' molars among mammals. PMID:17972884

  10. Genotyping Sleep Disorders Patients

    PubMed Central

    Shadan, Farhad F.; Dawson, Arthur; Cronin, John W.; Jamil, Shazia M.; Grizas, Alexandra P.; Koziol, James A.; Kline, Lawrence E.

    2010-01-01

    Objective The genetic susceptibility factors underlying sleep disorders might help us predict prognoses and responses to treatment. Several candidate polymorphisms for sleep disorders have been proposed, but there has as yet inadequate replication or validation that the candidates may be useful in the clinical setting. Methods To assess the validity of several candidate associations, we obtained saliva deoxyribonucleic acid (DNA) samples and clinical information from 360 consenting research participants who were undergoing clinical polysomnograms. Ten single nucleotide polymorphisms (SNPs) were genotyped. These were thought to be related to depression, circadian sleep disorders, sleep apnea, restless legs syndrome (RLS), excessive sleepiness, or to slow waves in sleep. Results With multivariate generalized linear models, the association of TEF rs738499 with depressive symptoms was confirmed. Equivocal statistical evidence of association of rs1801260 (the C3111T SNP in the CLOCK gene) with morningness/eveningness and an association of Apolipoprotein E (APOE) rs429358 with the Epworth Sleepiness Scale (ESS) were obtained, but these associations were not strong enough to be of clinical value by themselves. Predicted association of SNPs with sleep apnea, RLS, and slow wave sleep were not confirmed. Conclusion The SNPs tested would not, by themselves, be of use for clinical genotyping in a sleep clinic. PMID:20396431

  11. Carotenoids in Staple Cereals: Metabolism, Regulation, and Genetic Manipulation.

    PubMed

    Zhai, Shengnan; Xia, Xianchun; He, Zhonghu

    2016-01-01

    Carotenoids play a critical role in animal and human health. Animals and humans are unable to synthesize carotenoids de novo, and therefore rely upon diet as sources of these compounds. However, major staple cereals often contain only small amounts of carotenoids in their grains. Consequently, there is considerable interest in genetic manipulation of carotenoid content in cereal grain. In this review, we focus on carotenoid metabolism and regulation in non-green plant tissues, as well as genetic manipulation in staple cereals such as rice, maize, and wheat. Significant progress has been made in three aspects: (1) seven carotenogenes play vital roles in carotenoid regulation in non-green plant tissues, including 1-deoxyxylulose-5-phosphate synthase influencing isoprenoid precursor supply, phytoene synthase, β-cyclase, and ε-cyclase controlling biosynthesis, 1-hydroxy-2-methyl-2-(E)-butenyl 4-diphosphate reductase and carotenoid cleavage dioxygenases responsible for degradation, and orange gene conditioning sequestration sink; (2) provitamin A-biofortified crops, such as rice and maize, were developed by either metabolic engineering or marker-assisted breeding; (3) quantitative trait loci for carotenoid content on chromosomes 3B, 7A, and 7B were consistently identified, eight carotenogenes including 23 loci were detected, and 10 gene-specific markers for carotenoid accumulation were developed and applied in wheat improvement. A comprehensive and deeper understanding of the regulatory mechanisms of carotenoid metabolism in crops will be beneficial in improving our precision in improving carotenoid contents. Genomic selection and gene editing are emerging as transformative technologies for provitamin A biofortification. PMID:27559339

  12. Synthetic biology approaches to engineering the nitrogen symbiosis in cereals.

    PubMed

    Rogers, Christian; Oldroyd, Giles E D

    2014-05-01

    Nitrogen is abundant in the earth's atmosphere but, unlike carbon, cannot be directly assimilated by plants. The limitation this places on plant productivity has been circumvented in contemporary agriculture through the production and application of chemical fertilizers. The chemical reduction of nitrogen for this purpose consumes large amounts of energy and the reactive nitrogen released into the environment as a result of fertilizer application leads to greenhouse gas emissions, as well as widespread eutrophication of aquatic ecosystems. The environmental impacts are intensified by injudicious use of fertilizers in many parts of the world. Simultaneously, limitations in the production and supply of chemical fertilizers in other regions are leading to low agricultural productivity and malnutrition. Nitrogen can be directly fixed from the atmosphere by some bacteria and Archaea, which possess the enzyme nitrogenase. Some plant species, most notably legumes, have evolved close symbiotic associations with nitrogen-fixing bacteria. Engineering cereal crops with the capability to fix their own nitrogen could one day address the problems created by the over- and under-use of nitrogen fertilizers in agriculture. This could be achieved either by expression of a functional nitrogenase enzyme in the cells of the cereal crop or through transferring the capability to form a symbiotic association with nitrogen-fixing bacteria. While potentially transformative, these biotechnological approaches are challenging; however, with recent advances in synthetic biology they are viable long-term goals. This review discusses the possibility of these biotechnological solutions to the nitrogen problem, focusing on engineering the nitrogen symbiosis in cereals. PMID:24687978

  13. Carotenoids in Staple Cereals: Metabolism, Regulation, and Genetic Manipulation

    PubMed Central

    Zhai, Shengnan; Xia, Xianchun; He, Zhonghu

    2016-01-01

    Carotenoids play a critical role in animal and human health. Animals and humans are unable to synthesize carotenoids de novo, and therefore rely upon diet as sources of these compounds. However, major staple cereals often contain only small amounts of carotenoids in their grains. Consequently, there is considerable interest in genetic manipulation of carotenoid content in cereal grain. In this review, we focus on carotenoid metabolism and regulation in non-green plant tissues, as well as genetic manipulation in staple cereals such as rice, maize, and wheat. Significant progress has been made in three aspects: (1) seven carotenogenes play vital roles in carotenoid regulation in non-green plant tissues, including 1-deoxyxylulose-5-phosphate synthase influencing isoprenoid precursor supply, phytoene synthase, β-cyclase, and ε-cyclase controlling biosynthesis, 1-hydroxy-2-methyl-2-(E)-butenyl 4-diphosphate reductase and carotenoid cleavage dioxygenases responsible for degradation, and orange gene conditioning sequestration sink; (2) provitamin A-biofortified crops, such as rice and maize, were developed by either metabolic engineering or marker-assisted breeding; (3) quantitative trait loci for carotenoid content on chromosomes 3B, 7A, and 7B were consistently identified, eight carotenogenes including 23 loci were detected, and 10 gene-specific markers for carotenoid accumulation were developed and applied in wheat improvement. A comprehensive and deeper understanding of the regulatory mechanisms of carotenoid metabolism in crops will be beneficial in improving our precision in improving carotenoid contents. Genomic selection and gene editing are emerging as transformative technologies for provitamin A biofortification. PMID:27559339

  14. Thermomagnetic Stability in Pseudo Single Domain Grains

    NASA Astrophysics Data System (ADS)

    Nagy, Lesleis; Williams, Wyn; Muxworthy, Adrian; Fabian, Karl; Conbhuí, Pádraig Ó.

    2016-04-01

    The reliability of paleomagnetic remanences are well understood for fine grains of magnetite that are single-domain (SD, uniformly magnetized). In particular Néel's theory [1] outlined the thermal energies required to block and unblock magnetic remanences. This lead to determination of thermal stability for magnetization in fine grains as outlined in Pullaiah et. al. [2] and a comprehensive understanding of SD paleomagnetic recordings. It has been known for some time that single domain magnetite is possible only in the grain size range 30 - 80nm, which may only account for a small fraction of the grain size distribution in any rock sample. Indeed rocks are often dominated by grains in the pseudo single domain (PSD) size range, at approximately 80 - 1000nm. Toward the top end of this range multi-domain features begin to dominate. In order to determine thermomagnetic stability in PSD grains we need to identify the energy barriers between all possible pairs of local energy minima (LEM) domain states as a function of both temperature and grain size. We have attempted to do this using the nudged elastic band (NEB) method [3] which searches for minimum energy paths between any given pair of LEM states. Using this technique we have determined, for the first time, complete thermomagnetic stability curves for PSD magnetite. The work presented is at a preliminary stage. However it can be shown that PSD grains of magnetite with simple geometries (e.g. cubes or cuboctahedra) have very few low energy transition paths and the stability is likely to be similar to that observed for SD grains (as expected form experimental observations). The results will provide a basis for a much more rigorous understanding of the fidelity of paleomagnetic signals in assemblages of PSD grains and their ability to retain ancient recordings of the geomagnetic field. References: [1] Néel, Louis. "Théorie du traînage magnétique des ferromagnétiques en grains fins avec applications aux terres

  15. A case of mixed connective tissue disease with pseudo-pseudo Meigs' syndrome (PPMS)-like features.

    PubMed

    Cheah, C K; Ramanujam, S; Mohd Noor, N; Gandhi, C; D Souza, Beryl A; Gun, S C

    2016-02-01

    Pseudo-pseudo Meigs' syndrome (PPMS) has been reported to be a rare presentation of patients with systemic lupus erythematosus (SLE). However, such a presentation is not common in other forms of connective tissue disease. We presented a case of gross ascites, pleural effusion, and marked elevation of CA-125 level (PPMS-like features) that led to a diagnosis of MCTD. The patient responded to systemic steroid therapy. PMID:26377236

  16. Pseudo-ɛ expansion and renormalized coupling constants at criticality

    NASA Astrophysics Data System (ADS)

    Sokolov, A. I.; Nikitina, M. A.

    2014-05-01

    Universal values of dimensional effective coupling constants g2k that determine nonlinear susceptibilities χ2k and enter the scaling equation of state are calculated for n-vector field theory within the pseudo-ɛ expansion approach. Pseudo-ɛ expansions for g6 and g8 at criticality are derived for arbitrary n. Analogous series for ratios R6=g6/g42 and R8=g8/g43 that figure in the equation of state are also found, and the pseudo-ɛ expansion for Wilson fixed point location g4* descending from the six-loop renormalization group (RG) expansion for the β function is reported. Numerical results are presented for 0≤n≤64, with the most attention paid to the physically important cases n =0,1,2,3. Pseudo-ɛ expansions for quartic and sextic couplings have rapidly diminishing coefficients, so Padé resummation turns out to be sufficient to yield high-precision numerical estimates. Moreover, direct summation of these series with optimal truncation gives values of g4* and R6* that are almost as accurate as those provided by the Padé technique. Pseudo-ɛ expansion estimates for g8* and R8* are found to be much worse than those for lower-order couplings independently of the resummation method employed. The numerical effectiveness of the pseudo-ɛ expansion approach in two dimensions is also studied. Pseudo-ɛ expansion for g4* originating from the five-loop RG series for the β function of two-dimensional λϕ4 field theory is used to get numerical estimates for n ranging from 0 to 64. The approach discussed gives accurate enough values of g4* down to n =2 and leads to fair estimates for Ising and polymer (n =0) models.

  17. Pseudo-ε expansion and renormalized coupling constants at criticality.

    PubMed

    Sokolov, A I; Nikitina, M A

    2014-05-01

    Universal values of dimensional effective coupling constants g(2k) that determine nonlinear susceptibilities χ(2k) and enter the scaling equation of state are calculated for n-vector field theory within the pseudo-ε expansion approach. Pseudo-ε expansions for g(6) and g(8) at criticality are derived for arbitrary n. Analogous series for ratios R(6) = g(6)/g(4)(2) and R(8) = g(8)/g(4)(3) that figure in the equation of state are also found, and the pseudo-ε expansion for Wilson fixed point location g(4)(*) descending from the six-loop renormalization group (RG) expansion for the β function is reported. Numerical results are presented for 0 ≤ n ≤ 64, with the most attention paid to the physically important cases n = 0,1,2,3. Pseudo-ε expansions for quartic and sextic couplings have rapidly diminishing coefficients, so Padé resummation turns out to be sufficient to yield high-precision numerical estimates. Moreover, direct summation of these series with optimal truncation gives values of g(4)(*) and R(6)(*) that are almost as accurate as those provided by the Padé technique. Pseudo-ε expansion estimates for g(8)(*) and R(8)(*) are found to be much worse than those for lower-order couplings independently of the resummation method employed. The numerical effectiveness of the pseudo-ε expansion approach in two dimensions is also studied. Pseudo-ε expansion for g(4)(*) originating from the five-loop RG series for the β function of two-dimensional λϕ(4) field theory is used to get numerical estimates for n ranging from 0 to 64. The approach discussed gives accurate enough values of g(4)(*) down to n = 2 and leads to fair estimates for Ising and polymer (n = 0) models. PMID:25353759

  18. Simple and efficient methodology to determine mycotoxins in cereal syrups.

    PubMed

    Arroyo-Manzanares, Natalia; Huertas-Pérez, José F; Gámiz-Gracia, Laura; García-Campaña, Ana M

    2015-06-15

    Consumption of cereal syrups is increasing nowadays. Mycotoxins may be found in syrups resulting from the use of contaminated raw material or invading microorganisms in the final manufactured product. However, these matrices have been scarcely explored regarding their mycotoxin content. A sensitive, simple and rapid method for the determination of ten mycotoxins (ochratoxin A, fumonisin B1, fumonisin B2, deoxynivalenol, fusarenon-X, T-2 and HT-2 toxin, citrinin, sterigmatocystin and zearalenone) in cereal syrups (rice, wheat and barley) has been developed and characterised using ultra-high performance liquid chromatography coupled with tandem mass spectrometry (UHPLC-MS/MS) and a sample treatment based on QuEChERS procedure. Matrix-matched calibration curves were established and limits of quantification were below the limits usually established by current legislation in different foodstuff. The relative standard deviation of the whole analytical method was lower than 12% in all cases, while recoveries ranged from 70.2% to 100.6%, therefore fulfilling the current requirements for mycotoxins analysis. PMID:25660886

  19. Analysing lodging of the panicle bearing cereal teff (Eragrostis tef).

    PubMed

    van Delden, S H; Vos, J; Ennos, A R; Stomph, T J

    2010-05-01

    Lodging, the permanent displacement of crop plants from their vertical because of root or shoot failure, is a major yield constraint of the gluten free, panicle bearing cereal teff. The objective of this paper was to analyse the causes of lodging of teff by using, modifying and validating conventional biomechanical models. The model parameters were obtained from a field trial with two contrasting teff cultivars, using novel in situ and laboratory measurements under wet and dry conditions. Cross-species model validation was done with rice (Oryza sativa). Teff is more susceptible to root lodging than to shoot lodging, although the data indicated that shoot strength is also insufficient. Hence, simultaneously breeding for both improved root anchorage and shoot strength is advocated. The study showed that the lodging model, derived for the spike-bearing cereal wheat, needed modifications in order to be able to deal with panicle-bearing plants such as teff and rice. Water adhering to plants owing to rain or dew increased calculated lodging susceptibility. To prevent underestimation of lodging susceptibility, future lodging research should be done under completely wet conditions (water saturated soil and wetted shoots). PMID:20345637

  20. Metabolomics of cereals under biotic stress: current knowledge and techniques

    PubMed Central

    Balmer, Dirk; Flors, Victor; Glauser, Gaetan; Mauch-Mani, Brigitte

    2013-01-01

    Prone to attacks by pathogens and pests, plants employ intricate chemical defense mechanisms consisting of metabolic adaptations. However, many plant attackers are manipulating the host metabolism to counteract defense responses and to induce favorable nutritional conditions. Advances in analytical chemistry have allowed the generation of extensive metabolic profiles during plant-pathogen and pest interactions. Thereby, metabolic processes were found to be highly specific for given tissues, species, and plant-pathogen/pest interactions. The clusters of identified compounds not only serve as base in the quest of novel defense compounds, but also as markers for the characterization of the plants' defensive state. The latter is especially useful in agronomic applications where meaningful markers are essential for crop protection. Cereals such as maize make use of their metabolic arsenal during both local and systemic defense responses, and the chemical response is highly adapted to specific attackers. Here, we summarize highlights and recent findings of metabolic patterns of cereals under pathogen and pest attack. PMID:23630531

  1. Prospects for advancing defense to cereal rusts through genetical genomics.

    PubMed

    Ballini, Elsa; Lauter, Nick; Wise, Roger

    2013-01-01

    Rusts are one of the most severe threats to cereal crops because new pathogen races emerge regularly, resulting in infestations that lead to large yield losses. In 1999, a new race of stem rust, Puccinia graminis f. sp. tritici (Pgt TTKSK or Ug99), was discovered in Uganda. Most of the wheat and barley cultivars grown currently worldwide are susceptible to this new race. Pgt TTKSK has already spread northward into Iran and will likely spread eastward throughout the Indian subcontinent in the near future. This scenario is not unique to stem rust; new races of leaf rust (Puccinia triticina) and stripe rust (Puccinia striiformis) have also emerged recently. One strategy for countering the persistent adaptability of these pathogens is to stack complete- and partial-resistance genes, which requires significant breeding efforts in order to reduce deleterious effects of linkage drag. These varied resistance combinations are typically more difficult for the pathogen to defeat, since they would be predicted to apply lower selection pressure. Genetical genomics or expression Quantitative Trait Locus (eQTL) analysis enables the identification of regulatory loci that control the expression of many to hundreds of genes. Integrated deployment of these technologies coupled with efficient phenotyping offers significant potential to elucidate the regulatory nodes in genetic networks that orchestrate host defense responses. The focus of this review will be to present advances in genetical genomic experimental designs and analysis, particularly as they apply to the prospects for discovering partial disease resistance alleles in cereals. PMID:23641250

  2. Quantification of sugars in breakfast cereals using capillary electrophoresis.

    PubMed

    Toutounji, Michelle R; Van Leeuwen, Matthew P; Oliver, James D; Shrestha, Ashok K; Castignolles, Patrice; Gaborieau, Marianne

    2015-05-18

    About 80% of the Australian population consumes breakfast cereal (BC) at least five days a week. With high prevalence rates of obesity and other diet-related diseases, improved methods for monitoring sugar levels in breakfast cereals would be useful in nutrition research. The heterogeneity of the complex matrix of BCs can make carbohydrate analysis challenging or necessitate tedious sample preparation leading to potential sugar loss or starch degradation into sugars. A recently established, simple and robust free solution capillary electrophoresis (CE) method was used in a new application to 13 BCs (in Australia) and compared with several established methods for quantification of carbohydrates. Carbohydrates identified in BCs by CE included sucrose, maltose, glucose and fructose. The CE method is simple requiring no sample preparation or derivatization and carbohydrates are detected by direct UV detection. CE was shown to be a more robust and accurate method for measuring carbohydrates than Fehling method, DNS (3,5-dinitrosalicylic acid) assay and HPLC (high performance liquid chromatography). PMID:25841355

  3. Determination of pesticides and their metabolites in processed cereal samples.

    PubMed

    González-Curbelo, M Á; Hernández-Borges, J; Borges-Miquel, T M; Rodríguez-Delgado, M Á

    2012-01-01

    Fifteen pesticides including some of their metabolites (disulfoton sulfoxide, ethoprophos, cadusafos, dimethoate, terbufos, disulfoton, chlorpyrifos-methyl, malaoxon, fenitrothion, pirimiphos-methyl, malathion, chlorpyrifos, terbufos sulfone, disulfoton sulfone and fensulfothion) were analysed in milled toasted wheat and maize as well as in wheat flour and baby cereals. The QuEChERS (quick, easy, cheap, effective, rugged and safe) methodology was used and its dispersive solid-phase extraction procedure was optimised by means of an experimental design with the aim of reducing the amount of co-extracted lipids and obtaining a clean extract. Gas chromatography with nitrogen phosphorus detection were used as the separation and detection techniques, respectively. The method was validated in terms of selectivity, recoveries, calibration, precision and accuracy as well as matrix effects. Limits of detection were between 0.07 and 34.8 µg kg(-1) with recoveries in the range of 71-110% (relative standard deviations were below 9%). A total of 40 samples of different origin were analysed. Residues of pirimiphos-methyl were found in six of the samples at concentrations in the range 0.08-0.47 mg kg(-1), which were below the MRLs established for this pesticide in cereal grains. Tandem mass spectrometry confirmation was also carried out in order to identify unequivocally the presence of this pesticide. PMID:22043870

  4. Crunchiness Loss and Moisture Toughening in Puffed Cereals and Snacks.

    PubMed

    Peleg, Micha

    2015-09-01

    Upon moisture uptake, dry cellular cereals and snacks loose their brittleness and become soggy. This familiar phenomenon is manifested in smoothing their compressive force-displacement curves. These curves' degree of jaggedness, expressed by their apparent fractal dimension, can serve as an instrumental measure of the particles' crunchiness. The relationship between the apparent fractal dimension and moisture content or water activity has a characteristic sigmoid shape. The relationship between the sensorily perceived crunchiness and moisture also has a sigmoid shape whose inflection point lies at about the same location. The transition between the brittle and soggy states, however, appears sharper in the apparent fractal dimension compared with moisture plot. Less familiar is the observation that at moderate levels of moisture content, while the particles' crunchiness is being lost, their stiffness actually rises, a phenomenon that can be dubbed "moisture toughening." We show this phenomenon in commercial Peanut Butter Crunch® (sweet starch-based cereal), Cheese Balls (salty starch-based snack), and Pork Rind also known as "Chicharon" (salty deep-fried pork skin), 3 crunchy foods that have very different chemical composition. We also show that in the first 2 foods, moisture toughening was perceived sensorily as increased "hardness." We have concluded that the partial plasticization, which caused the brittleness loss, also inhibited failure propagation, which allowed the solid matrix to sustain higher stresses. This can explain other published reports of the phenomenon in different foods and model systems. PMID:26223457

  5. The C-Glycosylation of Flavonoids in Cereals*♦

    PubMed Central

    Brazier-Hicks, Melissa; Evans, Kathryn M.; Gershater, Markus C.; Puschmann, Horst; Steel, Patrick G.; Edwards, Robert

    2009-01-01

    Flavonoids normally accumulate in plants as O-glycosylated derivatives, but several species, including major cereal crops, predominantly synthesize flavone-C-glycosides, which are stable to hydrolysis and are biologically active both in planta and as dietary components. An enzyme (OsCGT) catalyzing the UDP-glucose-dependent C-glucosylation of 2-hydroxyflavanone precursors of flavonoids has been identified and cloned from rice (Oryza sativa ssp. indica), with a similar protein characterized in wheat (Triticum aestivum L.). OsCGT is a 49-kDa family 1 glycosyltransferase related to known O-glucosyltransferases. The recombinant enzyme C-glucosylated 2-hydroxyflavanones but had negligible O-glucosyltransferase activity with flavonoid acceptors. Enzyme chemistry studies suggested that OsCGT preferentially C-glucosylated the dibenzoylmethane tautomers formed in equilibrium with 2-hydroxyflavanones. The resulting 2-hydroxyflavanone-C-glucosides were unstable and spontaneously dehydrated in vitro to yield a mixture of 6C- and 8C-glucosyl derivatives of the respective flavones. In contrast, in planta, only the respective 6C-glucosides accumulated. Consistent with this selectivity in glycosylation product, a dehydratase activity that preferentially converted 2-hydroxyflavanone-C-glucosides to the corresponding flavone-6C-glucosides was identified in both rice and wheat. Our results demonstrate that cereal crops synthesize C-glucosylated flavones through the concerted action of a CGT and dehydratase acting on activated 2-hydroxyflavanones, as an alternative means of generating flavonoid metabolites. PMID:19411659

  6. HBV Genotypic Variability in Cuba

    PubMed Central

    Loureiro, Carmen L.; Aguilar, Julio C.; Aguiar, Jorge; Muzio, Verena; Pentón, Eduardo; Garcia, Daymir; Guillen, Gerardo; Pujol, Flor H.

    2015-01-01

    The genetic diversity of HBV in human population is often a reflection of its genetic admixture. The aim of this study was to explore the genotypic diversity of HBV in Cuba. The S genomic region of Cuban HBV isolates was sequenced and for selected isolates the complete genome or precore-core sequence was analyzed. The most frequent genotype was A (167/250, 67%), mainly A2 (149, 60%) but also A1 and one A4. A total of 77 isolates were classified as genotype D (31%), with co-circulation of several subgenotypes (56 D4, 2 D1, 5 D2, 7 D3/6 and 7 D7). Three isolates belonged to genotype E, two to H and one to B3. Complete genome sequence analysis of selected isolates confirmed the phylogenetic analysis performed with the S region. Mutations or polymorphisms in precore region were more common among genotype D compared to genotype A isolates. The HBV genotypic distribution in this Caribbean island correlates with the Y lineage genetic background of the population, where a European and African origin prevails. HBV genotypes E, B3 and H isolates might represent more recent introductions. PMID:25742179

  7. Determining cereal starch amylose content using a dual wavelength iodine binding 96 well plate assay

    Technology Transfer Automated Retrieval System (TEKTRAN)

    Cereal starch amylose/amylopectin (AM/AP) ratios are critical in functional properties for food and industrial applications. Conventional determination of AM/AP of cereal starches are very time consuming and labor intensive making it very difficult to screen large sample sets. Studying these large...

  8. Grass hosts of cereal aphids (Hemiptera: Aphididae) between wheat-cropping cycles in South Dakota

    Technology Transfer Automated Retrieval System (TEKTRAN)

    Several grasses may serve as alternative hosts for cereal aphids during the interim between small-grain crops in South Dakota, but field studies to determine which grasses are important have not been undertaken. We sampled annual and perennial grasses for cereal aphids in 18 counties in South Dakot...

  9. High-throughput gene expression studies provide clues for how cereal crops grow

    Technology Transfer Automated Retrieval System (TEKTRAN)

    Barley (Hordeum vulgare L.) was one of the first domesticated cereal grains, originating in the Fertile Crescent over 10,000 years ago. Barley ranks fourth among the cereals in worldwide production and is widely cultivated in all temperate regions from the Arctic Circle to the tropics. In addition...

  10. USE OF BIOTECHNOLOGY FOR INCORPORATING VALUE-ADDED TRAITS IN CEREAL CROPS

    Technology Transfer Automated Retrieval System (TEKTRAN)

    Cereal crops – chiefly wheat, rice, maize, sorghum, and pearl millet – are the main food source for more than two-thirds of the world population. From time immemorial humans, particularly those in the Asian and African countries, have relied heavily on cereals for their dietary carbohydrates. Brea...

  11. Self-Seeded Cereal Cover Crop Effects on Interspecific Competition with Corn

    Technology Transfer Automated Retrieval System (TEKTRAN)

    Perpetuating cereal cover crops through self-seeding may increase adoption by reducing risk and cost. Winter rye (Secale cereale L.), wheat (Triticum aestivum L.), and triticale (x Triticosecale Wittmack) were used to develop self-seeding cover crop systems in a soybean [Glycine max (L.) Merr.]-corn...

  12. Near-infrared (NIR) prediction of trans-fatty acids in ground cereal foods

    Technology Transfer Automated Retrieval System (TEKTRAN)

    Near infrared (NIR) reflectance spectroscopy was evaluated as a rapid method for prediction of trans-fatty acid content in ground cereal products without the need for oil extraction. NIR spectra (400-2498 nm) of ground cereal products were obtained with a dispersive NIR spectrometer and correlated ...

  13. Site-specific trade-offs of harvesting cereal residues as biofuel feedstocks

    Technology Transfer Automated Retrieval System (TEKTRAN)

    Cereal residues are considered an important feedstock for future biofuel production. Harvesting cereal residues, however, could lead to substantial soil degradation. Our objective was to evaluate trade-offs associated with harvesting straw including impacts on soil erosion and quality, soil organic ...

  14. Nutritive Value of Fall-Grown Cereal-Grain Forages Over Time

    Technology Transfer Automated Retrieval System (TEKTRAN)

    Changes in nutritive value of fall-grown cereal-grain forages over time can affect cattle performance. The objective of this study was to evaluate nutritive values of various fall-grown cereal-grain forages over time. One variety each of hard red (HR) and soft red (SR) winter wheat (Triticum aesti...

  15. Nutritive value of fall-grown cereal-grain forages over time.

    Technology Transfer Automated Retrieval System (TEKTRAN)

    Changes in nutritive value of fall-grown cereal-grain forages can affect cattle performance. The objective of this study was to evaluate the nutritive value of various fall-grown cereal-grain forages over time. One variety each of hard red (HR) and soft red (SR) winter wheat (Triticum aestivum L.), ...

  16. 40 CFR 406.80 - Applicability; description of the hot cereal subcategory.

    Code of Federal Regulations, 2013 CFR

    2013-07-01

    ... 40 Protection of Environment 30 2013-07-01 2012-07-01 true Applicability; description of the hot... (CONTINUED) EFFLUENT GUIDELINES AND STANDARDS GRAIN MILLS POINT SOURCE CATEGORY Hot Cereal Subcategory § 406.80 Applicability; description of the hot cereal subcategory. The provisions of this subpart...

  17. 40 CFR 406.80 - Applicability; description of the hot cereal subcategory.

    Code of Federal Regulations, 2011 CFR

    2011-07-01

    ... 40 Protection of Environment 29 2011-07-01 2009-07-01 true Applicability; description of the hot... (CONTINUED) EFFLUENT GUIDELINES AND STANDARDS GRAIN MILLS POINT SOURCE CATEGORY Hot Cereal Subcategory § 406.80 Applicability; description of the hot cereal subcategory. The provisions of this subpart...

  18. 40 CFR 406.80 - Applicability; description of the hot cereal subcategory.

    Code of Federal Regulations, 2014 CFR

    2014-07-01

    ... 40 Protection of Environment 29 2014-07-01 2012-07-01 true Applicability; description of the hot... (CONTINUED) EFFLUENT GUIDELINES AND STANDARDS GRAIN MILLS POINT SOURCE CATEGORY Hot Cereal Subcategory § 406.80 Applicability; description of the hot cereal subcategory. The provisions of this subpart...

  19. 40 CFR 406.80 - Applicability; description of the hot cereal subcategory.

    Code of Federal Regulations, 2010 CFR

    2010-07-01

    ... 40 Protection of Environment 28 2010-07-01 2010-07-01 true Applicability; description of the hot... (CONTINUED) EFFLUENT GUIDELINES AND STANDARDS GRAIN MILLS POINT SOURCE CATEGORY Hot Cereal Subcategory § 406.80 Applicability; description of the hot cereal subcategory. The provisions of this subpart...

  20. 40 CFR 406.80 - Applicability; description of the hot cereal subcategory.

    Code of Federal Regulations, 2012 CFR

    2012-07-01

    ... 40 Protection of Environment 30 2012-07-01 2012-07-01 false Applicability; description of the hot... (CONTINUED) EFFLUENT GUIDELINES AND STANDARDS GRAIN MILLS POINT SOURCE CATEGORY Hot Cereal Subcategory § 406.80 Applicability; description of the hot cereal subcategory. The provisions of this subpart...

  1. Role of alternate hosts in epidemiology and pathogen variation of cereal rusts

    Technology Transfer Automated Retrieval System (TEKTRAN)

    Cereal rusts, caused by obligate and biotrophic fungi in the genus Puccinia of basidiomycete are an important group of diseases threatening the world food security. With the recent discovery of alternate hosts for the stripe rust fungus (Puccinia striiformis), all cereal rust fungi are now known ...

  2. Development of a greenhouse-based inoculation protocol for the fungus Colletotrichum cereale pathogenic to annual bluegrass (Poa annua)

    Technology Transfer Automated Retrieval System (TEKTRAN)

    The fungus Colletotrichum cereale incites anthracnose disease on Poa annua (annual bluegrass) turfgrass. Anthracnose disease is geographically widespread highly destructive, with infections by C. cereale resulting in extensive turfgrass loss. Comprehensive research aimed at controlling turfgrass a...

  3. A Pilot Study Assesing Climate Change Impacts on Cereals

    NASA Astrophysics Data System (ADS)

    Topcu, Sevilay; Sen, Burak; Turkes, Murat

    2010-05-01

    The spatial and temporal impacts of climate change on the growth and yield of major cereals (first and second-crop corn) as well as wheat grown in Cukurova Region in the southern Turkey have been assessed, by combining the outputs from a regional climate model with a crop growth simulation model. With its 1.1 million ha of agricultural land, the Cukurova Region is one of the major agricultural production regions in Turkey. Wheat dominates in rain-fed areas while corn crops are grown in more than 50 % of the irrigated land in the region. Thus, the Region is providing half of the country's total cereal production. Since the region has a typical Mediterranean climate with almost no rain and high temperatures during the summer months, agricultural production is vulnerable to changes in climate in terms of decreasing rainfall and increasing temperatures and consequently shortage of water resources. To predict the future climate for the period 2070-2100, the regional climate model RegCM3 conditions was performed using IPCC's SRESS-A2 scenario, and climatic parameter such as daily mean, maximum and minimum temperatures, radiation as well as total annual precipitation were selected for the simulation study. Data for the period 1961 to 1990 were used as historical reference. The WOFOST model was used to simulate cereal growths and yields for two different water availability senarios: 1) potential production and 2) water-limited production conditions. Potential growth represents the conditions where no limiting factor such as water and nutrients is present, however due to the water-limited production situation, water for irrigation is limited as a consequence of water shortage. The detailed results of previous field experiments carried out with three cereal crops in different locations with different regional soil and climate conditions were used for the verification of the WOFOST model. According to the verification results, the model simulated the yield with less than 5

  4. Pseudo LRM waveforms from CryoSat SARin acquisition

    NASA Astrophysics Data System (ADS)

    Scagliola, Michele; Fornari, Marco; Bouffard, Jerome; Parrinello, Tommaso; Féménias, Pierre

    2016-04-01

    CryoSat was launched on the 8th April 2010 and is the first European ice mission dedicated to the monitoring of precise changes in the thickness of polar ice sheets and floating sea ice. The main payload of CryoSat is a Ku-band pulsewidth limited radar altimeter, called SIRAL (Synthetic interferometric radar altimeter). When commanded in SARIn (synthetic aperture radar interferometry) mode, through coherent along-track processing of the returns received from two antennas, the interferometric phase related to the first arrival of the echo is used to retrieve the angle of arrival of the scattering in the across-track direction. When SIRAL operates in SAR or SARin mode, the obtained waveforms have an along-track resolution and a speckle reduction which is increased with respect to the pulse-limited waveforms. Anyway, in order to analyze the continuity of the geophysical retrieved parameters among different acquisition modes, techniques to transform SARin mode data to pseudo-LRM mode data are welcome. The transformation process is known as SAR reduction and it is worth recalling here that only approximate pseudo-LRM waveforms can be obtained in case of closed burst acquisitions, as SIRAL operates. A SAR reduction processing scheme has been developed to obtain pseudo-LRM waveforms from CryoSat SARin acquisition. As a trade-off between the along-track length on Earth surface contributing to one SARin pseudo-LRM waveform and the noisiness of the waveform itself, it has been chosen a SAR reduction approach based on the averaging of all the SARin echoes received each 20Hz, resulting in one pseudo-LRM waveform for each SARin burst given the SARin burst repetition period. SARin pseudo-LRM waveforms have been produced for CryoSat acquisition both on ice and sea surfaces, aiming at verifying the continuity of the retracked surface height over the ellipsoid between genuine LRM products and pseudo-LRM products. Moreover, the retracked height from the SARin pseudo-LRM has been

  5. Regular biorthogonal pairs and pseudo-bosonic operators

    NASA Astrophysics Data System (ADS)

    Inoue, H.; Takakura, M.

    2016-08-01

    The first purpose of this paper is to show a method of constructing a regular biorthogonal pair based on the commutation rule: ab - ba = I for a pair of operators a and b acting on a Hilbert space H with inner product (ṡ| ṡ ). Here, sequences {ϕn} and {ψn} in a Hilbert space H are biorthogonal if (ϕn|ψm) = δnm, n, m = 0, 1, …, and they are regular if both Dϕ ≡ Span{ϕn} and Dψ ≡ Span{ψn} are dense in H . Indeed, the assumptions to construct the regular biorthogonal pair coincide with the definition of pseudo-bosons as originally given in F. Bagarello ["Pseudobosons, Riesz bases, and coherent states," J. Math. Phys. 51, 023531 (2010)]. Furthermore, we study the connections between the pseudo-bosonic operators a, b, a†, b† and the pseudo-bosonic operators defined by a regular biorthogonal pair ({ϕn}, {ψn}) and an ONB e of H in H. Inoue ["General theory of regular biorthogonal pairs and its physical applications," e-print arXiv:math-ph/1604.01967]. The second purpose is to define and study the notion of D -pseudo-bosons in F. Bagarello ["More mathematics for pseudo-bosons," J. Math. Phys. 54, 063512 (2013)] and F. Bagarello ["From self-adjoint to non self-adjoint harmonic oscillators: Physical consequences and mathematical pitfalls," Phys. Rev. A 88, 032120 (2013)] and give a method of constructing D -pseudo-bosons on some steps. Then it is shown that for any ONB e = {en} in H and any operators T and T-1 in L † ( D ) , we may construct operators A and B satisfying D -pseudo bosons, where D is a dense subspace in a Hilbert space H and L † ( D ) the set of all linear operators T from D to D such that T * D ⊂ D , where T* is the adjoint of T. Finally, we give some physical examples of D -pseudo-bosons based on standard bosons by the method of constructing D -pseudo-bosons stated above.

  6. Potential importance of low-sodium bread and breakfast cereal to a reduced sodium diet.

    PubMed

    Daugirdas, John T

    2013-01-01

    Purchasing data suggest that bread and cereal products are responsible for approximately 18% of normal daily unrestricted sodium intake; this percentage may be substantially higher in subjects attempting to follow a reduced sodium diet by avoiding added salt and salty sauces and meats. Substituting with low-sodium bread would be expected to result in a sodium intake reduction of 0.6 g/day or higher, depending on the amount of bread normally eaten. Many cold breakfast cereals typically contain 0.2 to 0.3 g of sodium per serving. A number of zero-sodium or low-sodium cold cereal options are commercially available, and many hot cereals are available in forms that contain no sodium. Because bread and breakfast cereals are not commonly thought of as being salty foods, substituting these with low-sodium alternatives might help achieve additional substantial sodium intake reduction without much disruption of the diet. PMID:22633991

  7. Cereal foods are the major source of betaine in the Western diet--analysis of betaine and free choline in cereal foods and updated assessments of betaine intake.

    PubMed

    Ross, Alastair B; Zangger, Alicia; Guiraud, Seu Ping

    2014-02-15

    Betaine and its precursor choline are important components of one-carbon metabolism, remethylating homocysteine into methionine and providing methyl groups for DNA methylation. Cereals are the main source of betaine in the diet, though there is little literature available on the content of betaine in cereal products, nor on betaine intake from cereals. Betaine and free-choline concentrations were measured by liquid-chromatography with tandem mass spectrometry in a wide range of commercially available cereal foods and cereal fractions. Whole grain wheat and related fractions were the best overall common source of betaine, while the pseudocereal quinoa had the highest amount of betaine measured (3900 μg/g). Based on estimates of dietary intake data cereal foods provide approximately 60-67% of betaine in Western diets, and 20-40% of betaine in South-East Asian diets. Average intake of betaine was 131 mg/d, well below those used in intervention studies using betaine to lower blood homocysteine. PMID:24128557

  8. Pseudo-scalar form factors at three loops in QCD

    NASA Astrophysics Data System (ADS)

    Ahmed, Taushif; Gehrmann, Thomas; Mathews, Prakash; Rana, Narayan; Ravindran, V.

    2015-11-01

    The coupling of a pseudo-scalar Higgs boson to gluons is mediated through a heavy quark loop. In the limit of large quark mass, it is described by an effective Lagrangian that only admits light degrees of freedom. In this effective theory, we compute the three-loop massless QCD corrections to the form factor that describes the coupling of a pseudo-scalar Higgs boson to gluons. Due to the axial anomaly, the pseudo-scalar operator for the gluonic field strength mixes with the divergence of the axial vector current. Working in dimensional regularization and using the 't Hooft-Veltman prescription for the axial vector current, we compute the three-loop pseudo-scalar form factors for massless quarks and gluons. Using the universal infrared factorization properties, we independently derive the three-loop operator mixing and finite operator renormalisation from the renormalisation group equation for the form factors, thereby confirming recent results in the operator product expansion. The finite part of the three-loop form factor is an important ingredient to the precise prediction of the pseudo-scalar Higgs boson production cross section at hadron colliders. We discuss potential applications and derive the hard matching coefficient in soft-collinear effective theory.

  9. Current reduction in a pseudo-breakup event: THEMIS observations

    NASA Astrophysics Data System (ADS)

    Yao, Z. H.; Pu, Z. Y.; Owen, C. J.; Fu, S. Y.; Chu, X. N.; Liu, J.; Angelopoulos, V.; Rae, I. J.; Yue, C.; Zhou, X.-Z.; Zong, Q.-G.; Cao, X.; Shi, Q. Q.; Forsyth, C.; Du, A. M.

    2014-10-01

    Pseudo-breakup events are thought to be generated by the same physical processes as substorms. This paper reports on the cross-tail current reduction in an isolated pseudo-breakup observed by three of the THEMIS probes (THEMIS A (THA), THEMIS D (THD), and THEMIS E (THE)) on 22 March 2010. During this pseudo-breakup, several localized auroral intensifications were seen by ground-based observatories. Using the unique spatial configuration of the three THEMIS probes, we have estimated the inertial and diamagnetic currents in the near-Earth plasma sheet associated with flow braking and diversion. We found the diamagnetic current to be the major contributor to the current reduction in this pseudo-breakup event. During flow braking, the plasma pressure was reinforced, and a weak electrojet and an auroral intensification appeared. After flow braking/diversion, the electrojet was enhanced, and a new auroral intensification was seen. The peak current intensity of the electrojet estimated from ground-based magnetometers, ~0.7 × 105 A, was about 1 order of magnitude lower than that in a typical substorm. We suggest that this pseudo-breakup event involved two dynamical processes: a current-reduction associated with plasma compression ahead of the earthward flow and a current-disruption related to the flow braking/diversion. Both processes are closely connected to the fundamental interaction between fast flows, the near-Earth ambient plasma, and the magnetic field.

  10. Modelling Pseudo-nitzschia events off southwest Ireland

    NASA Astrophysics Data System (ADS)

    Cusack, Caroline; Mouriño, Helena; Moita, Maria Teresa; Silke, Joe

    2015-11-01

    Toxic and non-toxic Pseudo-nitzschia blooms are common in coastal waters worldwide including Ireland. Off southwest Ireland, the timing of blooms on a weekly scale is highly variable, while the seasonal pattern is more regular with a bimodal distribution. Upwelling conditions are closely linked to Pseudo-nitzschia blooms. The work presented here describes a mathematical model, a Zero-Inflated Negative Binomial Model, employed to forecast the onset, abundance and duration of Pseudo-nitzschia blooms in the bays of southwest Ireland. Variables used in the model included field observations of Pseudo-nitzschia, sea surface temperature and wind. The estimated model reveals that, on average, cell levels on a given day depend on sea surface temperature, the value of a wind index on the previous day and the number of Pseudo-nitzschia in the water the previous week. The model forecast performed well for the onset and duration of blooms. However, the magnitude of blooms was sometimes underestimated by the model.