Daily estimates of the migrating tide and zonal mean temperature in the mesosphere and lower thermosphere derived from SABER data

NASA Astrophysics Data System (ADS)

Ortland, David A.

2017-04-01

Satellites provide a global view of the structure in the fields that they measure. In the mesosphere and lower thermosphere, the dominant features in these fields at low zonal wave number are contained in the zonal mean, quasi-stationary planetary waves, and tide components. Due to the nature of the satellite sampling pattern, stationary, diurnal, and semidiurnal components are aliased and spectral methods are typically unable to separate the aliased waves over short time periods. This paper presents a data processing scheme that is able to recover the daily structure of these waves and the zonal mean state. The method is validated by using simulated data constructed from a mechanistic model, and then applied to Sounding of the Atmosphere using Broadband Emission Radiometry (SABER) temperature measurements. The migrating diurnal tide extracted from SABER temperatures for 2009 has a seasonal variability with peak amplitude (20 K at 95 km) in February and March and minimum amplitude (less than 5 K at 95 km) in early June and early December. Higher frequency variability includes a change in vertical structure and amplitude during the major stratospheric warming in January. The migrating semidiurnal tide extracted from SABER has variability on a monthly time scale during January through March, minimum amplitude in April, and largest steady amplitudes from May through September. Modeling experiments were performed that show that much of the variability on seasonal time scales in the migrating tides is due to changes in the mean flow structure and the superposition of the tidal responses to water vapor heating in the troposphere and ozone heating in the stratosphere and lower mesosphere.

Radiometry in medicine and biology

NASA Astrophysics Data System (ADS)

Nahm, Kie-Bong; Choi, Eui Y.

2012-10-01

Diagnostics in medicine plays a critical role in helping medical professionals deliver proper diagnostic decisions. Most samples in this trade are of the human origin and a great portion of methodologies practiced in biology labs is shared in clinical diagnostic laboratories as well. Most clinical tests are quantitative in nature and recent increase in interests in preventive medicine requires the determination of minimal concentration of target analyte: they exist in small quantities at the early stage of various diseases. Radiometry or the use of optical radiation is the most trusted and reliable means of converting biologic concentrations into quantitative physical quantities. Since optical energy is readily available in varying energies (or wavelengths), the appropriate combination of light and the sample absorption properties provides reliable information about the sample concentration through Beer-Lambert law to a decent precision. In this article, the commonly practiced techniques in clinical and biology labs are reviewed from the standpoint of radiometry.

Comparison of rotational temperature derived from ground-based OH airglow observations with TIMED/SABER to evaluate the Einstein Coefficients

NASA Astrophysics Data System (ADS)

Liu, W.; Xu, J.; Smith, A. K.; Yuan, W.

2017-12-01

Ground-based observations of the OH(9-4, 8-3, 6-2, 5-1, 3-0) band airglows over Xinglong, China (40°24'N, 117°35'E) from December 2011 to 2014 are used to calculate rotational temperatures. The temperatures are calculated using five commonly used Einstein coefficient datasets. The kinetic temperature from TIMED/SABER is completely independent of the OH rotational temperature. SABER temperatures are weighted vertically by weighting functions calculated for each emitting vibrational state from two SABER OH volume emission rate profiles. By comparing the ground-based OH rotational temperature with SABER's, five Einstein coefficient datasets are evaluated. The results show that temporal variations of the rotational temperatures are well correlated with SABER's; the linear correlation coefficients are higher than 0.72, but the slopes of the fit between the SABER and rotational temperatures are not equal to 1. The rotational temperatures calculated using each set of Einstein coefficients produce a different bias with respect to SABER; these are evaluated over each of vibrational levels to assess the best match. It is concluded that rotational temperatures determined using any of the available Einstein coefficient datasets have systematic errors. However, of the five sets of coefficients, the rotational temperature derived with the Langhoff et al.'s (1986) set is most consistent with SABER. In order to get a set of optimal Einstein coefficients for rotational temperature derivation, we derive the relative values from ground-based OH spectra and SABER temperatures statistically using three year data. The use of a standard set of Einstein coefficients will be beneficial for comparing rotational temperatures observed at different sites.

Variabilities of Low-Latitude Migrating and Nonmigrating Tides in GPS-TEC and TIMED-SABER Temperature During the Sudden Stratospheric Warming Event of 2013

NASA Astrophysics Data System (ADS)

Sridharan, S.

2017-10-01

The Global Positioning System deduced total electron content (TEC) data at 15°N (geomagnetic), which is the crest region of equatorial ionization anomaly, are used to study tidal variabilities during the 2013 sudden stratospheric warming (SSW) event. The results from space-time spectral analysis reveal that the amplitudes of migrating diurnal (DW1) and semidiurnal (SW2) tides are larger than those of nonmigrating tides. After the SSW onset, the amplitudes of DW1, SW2, SW1, and DS0 increase. Moreover, they show 16 day variations similar to the periodicity of the high-latitude stratospheric planetary wave (PW), suggesting that the nonmigrating tides (SW1 and DS0) are possibly generated due to nonlinear interaction of migrating tides with PW. Similar spectral analysis on temperature at 10°N obtained from the Sounding of Atmosphere by Broadband Emission Radiometry (SABER) shows that the SW2 enhances at stratospheric heights and the SW2 is more dominant at 80-90 km, but its amplitude decreases around 100 km. The amplitudes of nonmigrating tides become comparable to those of SW2 around 100 km, and their contribution becomes increasingly important at higher heights. This suggests that the nonlinear interaction between migrating tides and PW occurs at low-latitude upper mesospheric heights, as SW2 exhibits 16 day periodicity in SABER temperature at 100 km as observed in TEC. Besides, it is observed that the eastward propagating tides are less dominant than westward propagating tides in both TEC and SABER temperatures.

Submillimeter-Wave Cloud Ice Radiometry

NASA Technical Reports Server (NTRS)

Walter, Steven J.

1999-01-01

Submillimeter-wave cloud ice radiometry is a new and innovative technique for characterizing cirrus ice clouds. Cirrus clouds affect Earth's climate and hydrological cycle by reflecting incoming solar energy, trapping outgoing IR radiation, sublimating into vapor, and influencing atmospheric circulation. Since uncertainties in the global distribution of cloud ice restrict the accuracy of both climate and weather models, successful development of this technique could provide a valuable tool for investigating how clouds affect climate and weather. Cloud ice radiometry could fill an important gap in the observational capabilities of existing and planned Earth-observing systems. Using submillimeter-wave radiometry to retrieve properties of ice clouds can be understood with a simple model. There are a number of submillimeter-wavelength spectral regions where the upper troposphere is transparent. At lower tropospheric altitudes water vapor emits a relatively uniform flux of thermal radiation. When cirrus clouds are present, they scatter a portion of the upwelling flux of submillimeter-wavelength radiation back towards the Earth as shown in the diagram, thus reducing the upward flux o f energy. Hence, the power received by a down-looking radiometer decreases when a cirrus cloud passes through the field of view causing the cirrus cloud to appear radiatively cool against the warm lower atmospheric thermal emissions. The reduction in upwelling thermal flux is a function of both the total cloud ice content and mean crystal size. Radiometric measurements made at multiple widely spaced frequencies permit flux variations caused by changes in crystal size to be distinguished from changes in ice content, and polarized measurements can be used to constrain mean crystal shape. The goal of the cloud ice radiometry program is to further develop and validate this technique of characterizing cirrus. A multi-frequency radiometer is being designed to support airborne science and

Titan's surface from the Cassini RADAR radiometry data during SAR mode

USGS Publications Warehouse

Paganelli, F.; Janssen, M.A.; Lopes, R.M.; Stofan, E.; Wall, S.D.; Lorenz, R.D.; Lunine, J.I.; Kirk, R.L.; Roth, L.; Elachi, C.

2008-01-01

We present initial results on the calibration and interpretation of the high-resolution radiometry data acquired during the Synthetic Aperture Radar (SAR) mode (SAR-radiometry) of the Cassini Radar Mapper during its first five flybys of Saturn's moon Titan. We construct maps of the brightness temperature at the 2-cm wavelength coincident with SAR swath imaging. A preliminary radiometry calibration shows that brightness temperature in these maps varies from 64 to 89 K. Surface features and physical properties derived from the SAR-radiometry maps and SAR imaging are strongly correlated; in general, we find that surface features with high radar reflectivity are associated with radiometrically cold regions, while surface features with low radar reflectivity correlate with radiometrically warm regions. We examined scatterplots of the normalized radar cross-section ??0 versus brightness temperature, outlining signatures that characterize various terrains and surface features. The results indicate that volume scattering is important in many areas of Titan's surface, particularly Xanadu, while other areas exhibit complex brightness temperature variations consistent with variable slopes or surface material and compositional properties. ?? 2007.

Measurement of inflammation in man and animals by radiometry.

PubMed

Collins, A J; Ring, E F

1972-01-01

1. A radiometer is described, which is sensitive to infrared radiation in the range 0-25 mum, and which, after calibration with a black body standard can be used as a non-contact, fast reading thermometer.2. An example of acute joint inflammation in a patient with rheumatoid arthritis is described. The temperatures over the joint measured by radiometry, followed inflammatory changes in the joint effusion.3. Using rats, the method of measuring inflammation by radiometry was compared with measurements of increase in joint size. Changes measured by radiometry preceded changes shown by increase in joint size.4. The radiometer method was able to demonstrate the effect of an anti-inflammatory drug, given orally, against carrageenin inflammation.5. The procedure was found to be an accurate means of measuring inflammation and the anti-inflammatory effects of drugs. It was faster and less tedious than the other methods for the quantitative measurement of inflammation in man and animals.

Performance analysis in saber.

PubMed

Aquili, Andrea; Tancredi, Virginia; Triossi, Tamara; De Sanctis, Desiree; Padua, Elvira; DʼArcangelo, Giovanna; Melchiorri, Giovanni

2013-03-01

Fencing is a sport practiced by both men and women, which uses 3 weapons: foil, épée, and saber. In general, there are few scientific studies available in international literature; they are limited to the performance analysis of fencing bouts, yet there is nothing about saber. There are 2 kinds of competitions in the World Cup for both men and women: the "FIE GP" and "A." The aim of this study was to carry out a saber performance analysis to gain useful indicators for the definition of a performance model. In addition, it is expected to verify if it could be influenced by the type of competition and if there are differences between men and women. Sixty bouts: 33 FIE GP and 27 "A" competitions (35 men's and 25 women's saber bouts) were analyzed. The results indicated that most actions are offensive (55% for men and 49% for women); the central area of the piste is mostly used (72% for men and 67% for women); the effective fighting time is 13.6% for men and 17.1% for women, and the ratio between the action and break times is 1:6.5 for men and 1:5.1 for women. A lunge is carried out every 23.9 seconds by men and every 20 seconds by women, and a direction change is carried out every 65.3 seconds by men and every 59.7 seconds by women. The data confirm the differences between the saber and the other 2 weapons. There is no significant difference between the data of the 2 different kinds of competitions.

Water Vapor, Temperature, and Ice Particles in Polar Mesosphere as Measured by SABER/TIMED and OSIRIS/Odin Instruments

NASA Technical Reports Server (NTRS)

Feofilov, A. G.; Petelina, S. V.; Kutepov, A. A.; Pesnell, W. D.; Goldberg, R. A.

2009-01-01

Although many new details on the properties of mesospheric ice particles that farm Polar Mesospheric Clouds (PMCs) and also cause polar mesospheric summer echoes have been recently revealed, certain aspects of mesospheric ice microphysics and dynamics still remain open. The detailed relation between PMC parameters and properties of their environment, as well as interseasonal and interhemispheric differences and trends in PMC properties that are possibly related to global change, are among those open questions. In this work, mesospheric temperature and water vapor concentration measured by the Sounding of the Atmosphere using Broadband Emission Radiometry (SABER) instrument on board the Thermosphere Ionosphere Mesosphere Energetics and Dynamics (TIMED) satellite are used to study the properties of PMCs with respect to the surrounding atmosphere. The cloud parameters, namely location, brightness, and altitude, are obtained from the observations made by the Optical Spectrograph and Infrared Imager System (OSIRIS) on the Odin satellite. About a thousand of simultaneous common volume measurements made by SABER and OSIRIS in both hemispheres from 2002 until 2008 are used. The correlation between PMC brightness (and occurrence rate) and temperatures at PMC altitudes and at the mesopause is analysed. The relation between PMC parameters, frost point temperature, and gaseous water vapor content in and below the cloud is also discussed. Interseasonal and interhemispheric differences and trends in the above parameters, as well as in PMC peak altitudes and mesopause altitudes are evaluated.

Radiometry simulation within the end-to-end simulation tool SENSOR

NASA Astrophysics Data System (ADS)

Wiest, Lorenz; Boerner, Anko

2001-02-01

12 An end-to-end simulation is a valuable tool for sensor system design, development, optimization, testing, and calibration. This contribution describes the radiometry module of the end-to-end simulation tool SENSOR. It features MODTRAN 4.0-based look up tables in conjunction with a cache-based multilinear interpolation algorithm to speed up radiometry calculations. It employs a linear reflectance parameterization to reduce look up table size, considers effects due to the topology of a digital elevation model (surface slope, sky view factor) and uses a reflectance class feature map to assign Lambertian and BRDF reflectance properties to the digital elevation model. The overall consistency of the radiometry part is demonstrated by good agreement between ATCOR 4-retrieved reflectance spectra of a simulated digital image cube and the original reflectance spectra used to simulate this image data cube.

Mesospheric H2O Concentrations Retrieved from SABER/TIMED Measurements

NASA Technical Reports Server (NTRS)

Feofilov, A. G.; Marshall, B. T.; Garcia-Comas, M.; Kutepov, A. A.; Lopez-Puertas, M.; Manuilova, R. O.; Yankovsky, V.A.; Goldberg, R. A.; Gordley, L. L.; Petelin, S.;

Variations of global gravity waves derived from 14 years of SABER temperature observations

NASA Astrophysics Data System (ADS)

Liu, Xiao; Yue, Jia; Xu, Jiyao; Garcia, Rolando R.; Russell, James M.; Mlynczak, Martin; Wu, Dong L.; Nakamura, Takuji

2017-06-01

The global gravity wave (GW) potential energy (PE) per unit mass is derived from SABER (Sounding of the Atmosphere using Broadband Emission Radiometry) temperature profiles over the past 14 years (2002-2015). Since the SABER data cover longer than one solar cycle, multivariate linear regression is applied to calculate the trend (means linear trend from 2002 to 2015) of global GW PE and the responses of global GW PE to solar activity, to QBO (quasi-biennial oscillation) and to ENSO (El Niño-Southern Oscillation). We find a significant positive trend of GW PE at around 50°N during July from 2002 to 2015, in agreement with ground-based radar observations at a similar latitude but from 1990 to 2010. Both the monthly and the deseasonalized trends of GW PE are significant near 50°S. Specifically, the deseasonalized trend of GW PE has a positive peak of 12-15% per decade at 40°S-50°S and below 60 km, which suggests that eddy diffusion is increasing in some places. A significant positive trend of GW PE near 50°S could be due to the strengthening of the polar stratospheric jets, as documented from Modern Era Retrospective-analysis for Research and Applications wind data. The response of GW PE to solar activity is negative in the lower and middle latitudes. The response of GW PE to QBO (as indicated by 30 hPa zonal winds over the equator) is negative in the tropical upper stratosphere and extends to higher latitudes at higher altitudes. The response of GW PE to ENSO (as indicated by the Multivariate ENSO Index) is positive in the tropical upper stratosphere.

LATTICE: The Lower ATmosphere-Thermosphere-Ionosphere Coupling Experiment

NASA Astrophysics Data System (ADS)

Mlynczak, M. G.; Yee, J. H.

2017-12-01

We present the Lower Atmosphere-Thermosphere-Ionosphere Coupling Experiment (LATTICE), which is a candidate mission for proposal to a future NASA Announcement of Opportunity. LATTICE will make the first consistent measurements of global kinetic temperature from the tropopause up to at least 160 km, along with global vector winds from 100 to 160 km at all local times. LATTICE thus provides, for the first time, a consistent picture of the coupling of the terrestrial lower atmosphere to the thermosphere-ionosphere system, which is a major scientific goal outlined in the 2012 Heliophysics Decadal Survey. The core instruments on LATTICE are the Terahertz Limb Sounder (TLS) and the Sounding of the Atmosphere using Broadband Emission Radiometry-II (SABER-II) instrument. The TLS instrument measures the 147 µm (2.04 THz) fine structure line of atomic oxygen. From these measurements TLS will provide kinetic temperature, atomic oxygen density, and vector wind from 100 to at least 160 km altitude. SABER-II is an infrared radiometer and is optically identical to the legacy SABER instrument on the current TIMED satellite. SABER-II is half the mass, half the power, and one-third the volume of the legacy instrument, and expects the same radiometric performance. SABER-II will again measure kinetic temperature from 15 to 110 km and will make measurements of key parameters in the thermosphere-ionosphere system including NO+, the green line and red line emissions, as well as continuing legacy measurements of ozone, water vapor, atomic oxygen, and atomic hydrogen in the mesosphere and lower thermosphere. We will describe the LATTICE mission in detail including other potential instruments for diagnosing thermospheric composition and high latitude energy inputs, and for measuring solar ultraviolet irradiance.

LASER APPLICATIONS AND OTHER TOPICS IN QUANTUM ELECTRONICS: Study of photoinduced absorption by the method of modified laser photothermal radiometry

NASA Astrophysics Data System (ADS)

Skvortsov, L. A.; Maksimov, E. M.; Tuchkov, A. A.

2008-10-01

The application of the method of modified laser photothermal radiometry for studying the photoinduced absorption in thin films is considered. The sensitivity of the method is estimated. The mechanism of induced near-IR absorption in titanium dioxide films is proposed and the nature of surface defects responsible for this process is explained. It is shown that kinetic equations describing monomolecular recombination are consistent with the experimental dependences for the thermal activation energy of defects equal to 0.17±0.04 eV.

A comparison of ground-based hydroxyl airglow temperatures with SABER/TIMED measurements over 23° N, India

NASA Astrophysics Data System (ADS)

Parihar, Navin; Singh, Dupinder; Gurubaran, Subramanian

2017-03-01

Ground-based observations of OH (6, 2) Meinel band nightglow were carried out at Ranchi (23.3° N, 85.3° E), India, during January-March 2011, December 2011-May 2012 and December 2012-March 2013 using an all-sky imaging system. Near the mesopause, OH temperatures were derived from the OH (6, 2) Meinel band intensity information. A limited comparison of OH temperatures (TOH) with SABER/TIMED measurements in 30 cases was performed by defining almost coincident criterion of ±1.5° latitude-longitude and ±3 min of the ground-based observations. Using SABER OH 1.6 and 2.0 µm volume emission rate profiles as the weighing function, two sets of OH-equivalent temperature (T1. 6 and T2. 0 respectively) were estimated from its kinetic temperature profile for comparison with OH nightglow measurements. Overall, fair agreement existed between ground-based and SABER measurements in the majority of events within the limits of experimental errors. Overall, the mean value of OH-derived temperatures and SABER OH-equivalent temperatures were 197.3 ± 4.6, 192.0 ± 10.8 and 192.7 ± 10.3 K, and the ground-based temperatures were 4-5 K warmer than SABER values. A difference of 8 K or more is noted between two measurements when the peak of the OH emission layer lies in the vicinity of large temperature inversions. A comparison of OH temperatures derived using different sets of Einstein transition probabilities and SABER measurements was also performed; however, OH temperatures derived using Langhoff et al. (1986) transition probabilities were found to compare well.

SABER-School Finance: Data Collection Instrument

ERIC Educational Resources Information Center

King, Elizabeth; Patrinos, Harry; Rogers, Halsey

2015-01-01

The aim of the SABER-school finance initiative is to collect, analyze and disseminate comparable data about education finance systems across countries. SABER-school finance assesses education finance systems along six policy goals: (i) ensuring basic conditions for learning; (ii) monitoring learning conditions and outcomes; (iii) overseeing…

Statistical comparisons of gravity wave features derived from OH airglow and SABER data

NASA Astrophysics Data System (ADS)

Gelinas, L. J.; Hecht, J. H.; Walterscheid, R. L.

2017-12-01

The Aerospace Corporation's near-IR camera (ANI), deployed at Andes Lidar Observatory (ALO), Cerro Pachon Chile (30S,70W) since 2010, images the bright OH Meinel (4,2) airglow band. The imager provides detailed observations of gravity waves and instability dynamics, as described by Hecht et al. (2014). The camera employs a wide-angle lens that views a 73 by 73 degree region of the sky, approximately 120 km x 120 km at 85 km altitude. Image cadence of 30s allows for detailed spectral analysis of the horizontal components of wave features, including the evolution and decay of instability features. The SABER instrument on NASA's TIMED spacecraft provides remote soundings of kinetic temperature profiles from the lower stratosphere to the lower thermosphere. Horizontal and vertical filtering techniques allow SABER temperatures to be analyzed for gravity wave variances [Walterscheid and Christensen, 2016]. Here we compare the statistical characteristics of horizontal wave spectra, derived from airglow imagery, with vertical wave variances derived from SABER temperature profiles. The analysis is performed for a period of strong mountain wave activity over the Andes spanning the period between June and September 2012. Hecht, J. H., et al. (2014), The life cycle of instability features measured from the Andes Lidar Observatory over Cerro Pachon on March 24, 2012, J. Geophys. Res. Atmos., 119, 8872-8898, doi:10.1002/2014JD021726. Walterscheid, R. L., and A. B. Christensen (2016), Low-latitude gravity wave variances in the mesosphere and lower thermosphere derived from SABER temperature observation and compared with model simulation of waves generated by deep tropical convection, J. Geophys. Res. Atmos., 121, 11,900-11,912, doi:10.1002/2016JD024843.

Hand-held radiometry: A set of notes developed for use at the Workshop of Hand-held radiometry

NASA Technical Reports Server (NTRS)

Jackson, R. D.; Pinter, P. J., Jr.; Reginato, R. J.; Idso, S. B. (Principal Investigator)

1980-01-01

A set of notes was developed to aid the beginner in hand-held radiometry. The electromagnetic spectrum is reviewed, and pertinent terms are defined. View areas of multiband radiometers are developed to show the areas of coincidence of adjacent bands. The amounts of plant cover seen by radiometers having different fields of view are described. Vegetation indices are derived and discussed. Response functions of several radiometers are shown and applied to spectrometer data taken over 12 wheat plots, to provide a comparison of instruments and bands within and among instruments. The calculation of solar time is reviewed and applied to the calculation of the local time of LANDSAT satellite overpasses for any particular location in the Northern Hemisphere. The use and misuse of hand-held infrared thermometers are discussed, and a procedure for photographic determination of plant cover is described. Some suggestions are offered concerning procedures to be followed when collecting hand-held spectral and thermal data. A list of references pertinent to hand-held radiometry is included.

Determination of combustion gas temperatures by infrared radiometry in sooting and nonsooting flames

NASA Technical Reports Server (NTRS)

Lyons, Valerie J.; Gracia-Salcedo, Carmen M.

1989-01-01

Flame temperatures in nonsooting and sooting environments were successfully measured by radiometry for pre-mixed propane-oxygen laminar flames stabilized on a water-cooled, porous sintered-bronze burner. The measured temperatures in the nonsooting flames were compared with fine-wire thermocouple measurements. The results show excellent agreement below 1700 K, and when the thermocouple measurements were corrected for radiation effects, the agreement was good for even higher temperatures. The benefits of radiometry are: (1) the flow is not disturbed by an intruding probe, (2) calibration is easily done using a blackbody source, and (3) measurements can be made even with soot present. The theory involved in the radiometry measurements and the energy balance calculations used to correct the thermocouple temperature measurements are discussed.

Storm Time Variation of Radiative Cooling by Nitric Oxide as Observed by TIMED-SABER and GUVI

NASA Astrophysics Data System (ADS)

Bharti, Gaurav; Sunil Krishna, M. V.; Bag, T.; Jain, Puneet

2018-02-01

The variation of O/N2 (reference to N2 column density 1017 cm-2) and nitric oxide radiative emission flux exiting the thermosphere have been studied over the Northern Hemisphere during the superstorm event of 7-12 November 2004. The data have been obtained from Global Ultraviolet Imager (GUVI) and Sounding of the Atmosphere using Broadband Emission Radiometry (SABER) on board the National Aeronautics and Space Administration (NASA)'s Thermosphere, Ionosphere, Mesosphere Energetics and Dynamics (TIMED) satellite. The NO radiative flux is observed to show an anti-correlation with O/N2 on a global scale. Both NO radiative flux and O/N2 ratio show equatorward motion with maximum penetration in western longitude sectors. A local variation of O, O2, and N2 densities have been calculated using NRLMSISE-00 model over a midlatitude location (55°N,180°E). On a local scale, model calculated O/O2 and O/N2 ratios are found to follow the observations made by GUVI. The collisional excitation of NO with atomic oxygen is the most dominant process for the total cooling rate. The SABER-retrieved NO cooling rate (CR) at a local site suggests an enhancement during the storm period with the peak emission rate closely correlated to the progression of the storm. The peak emission altitude of NO CR moves upward during the main phase of the storm. The NO abundance has been calculated by using cooling rate and Nitric Oxide Empirical Model (NOEM) model. Both these suggest a vary large (3-15 times) increase in NO density during the storm, which is required to account the changes in NO radiative flux. A similar kind of enhancement in NO abundance is also noticed in Student Nitric Oxide Explorer observations during intense geomagnetic storms.

Estuarine Salinity Mapping From Airborne Radiometry

NASA Astrophysics Data System (ADS)

Walker, J. P.; Gao, Y.; Cook, P. L. M.; Ye, N.

2016-12-01

Estuaries are critical ecosystems providing both ecological habitat and human amenity including boating and recreational fishing. Salinity gradients, caused by the mixing of fresh and salt water, exert an overwhelming control on estuarine ecology and biogeochemistry as well as being a key tracer for model calibration. At present, salinity monitoring within estuaries typically uses point measurements or underway boat-based methods, which makes sensing of localised phenomena such as upwelling of saline bottom water difficult. This study has pioneered the use of airborne radiometry (passive microwave) sensing as a new method to remotely quantify estuarine salinity, allowing rapid production of high resolution surface salinity maps. The airborne radiometry mapping was conducted for the Gippsland Lakes, the largest estuary in Australia, in February, July, October and November of 2015, using the Polarimetric L-band Microwave Radiometer (PLMR). Salinity was retrieved from the brightness temperature collected by PLMR with results validated against boat sampling conducted concurrently with each flight. Results showed that the retrieval accuracy of the radiative transfer model was better than 5 ppt for most flights. The spatial, temporal and seasonal variations of salinity observed in this study are also analysed and discussed.

Detection of vesicoureteral reflux using microwave radiometry-system characterization with tissue phantoms.

PubMed

Arunachalam, Kavitha; Maccarini, Paolo; De Luca, Valeria; Tognolatti, Piero; Bardati, Fernando; Snow, Brent; Stauffer, Paul

2011-06-01

Microwave (MW) radiometry is proposed for passive monitoring of kidney temperature to detect vesicoureteral reflux (VUR) of urine that is externally heated by a MW hyperthermia device and thereafter reflows from the bladder to kidneys during reflux. Here, we characterize in tissue-mimicking phantoms the performance of a 1.375 GHz radiometry system connected to an electromagnetically (EM) shielded microstrip log spiral antenna optimized for VUR detection. Phantom EM properties are characterized using a coaxial dielectric probe and network analyzer (NA). Power reflection and receive patterns of the antenna are measured in layered tissue phantom. Receiver spectral measurements are used to assess EM shielding provided by a metal cup surrounding the antenna. Radiometer and fiberoptic temperature data are recorded for varying volumes (10-30 mL) and temperaturesg (40-46°C) of the urine phantom at 35 mm depth surrounded by 36.5°C muscle phantom. Directional receive pattern with about 5% power spectral density at 35 mm target depth and better than -10 dB return loss from tissue load are measured for the antenna. Antenna measurements demonstrate no deterioration in power reception and effective EM shielding in the presence of the metal cup. Radiometry power measurements are in excellent agreement with the temperature of the kidney phantom. Laboratory testing of the radiometry system in temperature-controlled phantoms supports the feasibility of passive kidney thermometry for VUR detection.

Sarah J. Hale High School-Project SABER.

ERIC Educational Resources Information Center

Rosenblatt, Harold

Project SABER, which operated in Sarah J. Hale High School in South Brooklyn, New York, consisted of bilingual instructional and supportive services to 9th and 10th grade Spanish language students. Students received bilingual instruction in social studies, science, math, and Spanish. All the SABER students received English as a second language…

Landsat Radiometry Project

NASA Technical Reports Server (NTRS)

2005-01-01

This final report summarizes three years of work characterizing the radiometry of the Landsat 4, 5 and 7 Thematic Mappers. It is divided into six sections that are representative of the major areas of effort: 1) Internal Calibrator Lamp Monitoring; 2) Vicarious Calibration; 3) Relative Gain Analysis; 4) Outgassing; 5) Landsat 4 Absolute Calibration; and 6) Landsat 5 Scene Invariant Analysis. Each section provides a summary overview of the work that has been performed at SDSU. Major results are highlighted. In several cases, references are given to publications that have developed from this work, Several team members contributed to this report: Tim Ruggles, Dave Aaron, Shriharsha Madhavan, Esad Micijevic, Cory Mettler, and Jim Dewald. At the end of the report is a summary section.

Advances in radiometry for ocean color

USGS Publications Warehouse

Brown, S.W.; Clark, D.K.; Johnson, B.C.; Yoon, H.; Lykke, K.R.; Flora, S.J.; Feinholz, M.E.; Souaidia, N.; Pietras, C.; Stone, T.C.; Yarbrough, M.A.; Kim, Y.S.; Barnes, R.A.; Mueller, J.L.

2004-01-01

We have presented a number of recent developments in radiometry that directly impact the uncertainties achievable in ocean-color research. Specifically, a new (2000) U. S. national irradiance scale, a new LASER-based facility for irradiance and radiance responsivity calibrations, and applications of the LASER facility for the calibration of sun photometers and characterization of spectrographs were discussed. For meaningful long-time-series global chlorophyll-a measurements, all instruments involved in radiometric measurements, including satellite sensors, vicarious calibration sensors, sensors used in the development of bio-optical algorithms and atmospheric characterization need to be fully characterized and corrected for systematic errors, including, but not limited to, stray light. A unique, solid-state calibration source is under development to reduce the radiometric uncertainties in ocean color instruments, in particular below 400 nm. Lunar measurements for trending of on-orbit sensor channel degradation were described. Unprecedented assessments, within 0.1 %, of temporal stability and drift in a satellite sensor's radiance responsivity are achievable with this approach. These developments advance the field of ocean color closer to the desired goal of reducing the uncertainty in the fundamental radiometry to a small component of the overall uncertainty in the derivation of remotely sensed ocean-color data products such as chlorophyll a.

Profiling atmospheric water vapor by microwave radiometry

NASA Technical Reports Server (NTRS)

Wang, J. R.; Wilheit, T. T.; Szejwach, G.; Gesell, L. H.; Nieman, R. A.; Niver, D. S.; Krupp, B. M.; Gagliano, J. A.; King, J. L.

1983-01-01

High-altitude microwave radiometric observations at frequencies near 92 and 183.3 GHz were used to study the potential of retrieving atmospheric water vapor profiles over both land and water. An algorithm based on an extended kalman-Bucy filter was implemented and applied for the water vapor retrieval. The results show great promise in atmospheric water vapor profiling by microwave radiometry heretofore not attainable at lower frequencies.

Observing Lava Flows with Spaceborne Microwave Radiometry

NASA Astrophysics Data System (ADS)

Lorenz, R. D.

2017-12-01

The interpretation of infrared observations of lava flows is well-established, both on Earth and Io, to establish flow areas and temperatures, and thereby constrain eruption rates. However, the detection of such radiation from space requires lava temperatures that are high enough to be incandescent, and a relatively clear atmosphere. The former condition is met only for a short period after eruption as the top millimeters of lava cool quickly. The latter condition may fail due to ash or water clouds on Earth, or the persistent thick clouds on Venus. Microwave radiometry, which in principle probes to depths of centimeters to decimeters, offers the prospect of detecting older flows. It furthermore is minimally sensitive to cloud.The challenge, however, is that spaceborne microwave instruments have relatively large footprints (sometimes 100km) such that the emission from relatively small flows is heavily diluted and therefore difficult to detect. Here we describe models of microwave remote sensing of recent volcanics on Earth, Venus and Titan, and present some preliminary observational studies of terrestrial volcanoes with the SMAP (Soil Moisture Active Passive) radiometer. This spacecraft has a large antenna to yield a relatively narrow observation footprint, and a long wavelength to penetrate into volcanic rock, and thus offers the best prospects yet for volcano surveillance in microwave radiometry.

A satellite-based multichannel infrared radiometer to sound the atmosphere

NASA Technical Reports Server (NTRS)

Esplin, Roy W.; Batty, J. Clair; Jensen, Mark; McLain, Dave; Jensen, Scott; Stauder, John; Stump, Charles W.; Roettker, William A.; Vanek, Michael D.

1995-01-01

This paper describes a 12-channel infrared radiometer with the acronym SABER (Sounding of the Atmosphere using Broadband Emission radiometry) that has been selected by NASA to fly on the TIMED (Thermosphere-Ionosphere-Mesosphere Energetics and Dynamics) mission.

FOREWORD: The 11th International Conference on New Developments and Applications in Optical Radiometry (NEWRAD 2011) The 11th International Conference on New Developments and Applications in Optical Radiometry (NEWRAD 2011)

NASA Astrophysics Data System (ADS)

Ikonen, Erkki

2012-04-01

The NEWRAD Conferences bring together people from the National Metrology Institutes and the principal user communities of advanced radiometry, including Earth observation and climate communities. The eleventh NEWRAD Conference was held in Hawaii, USA, between 18 and 23 September 2011. The Conference was organized by the Moss Landing Marine Laboratories, Maui, at the Grand Wailea resort. The organization was a joint Pacific effort, where handling of the submitted abstracts and website administration were taken care of by KRISS (Korea Research Institute of Standards and Science) and NIST (National Institute of Standards and Technology), respectively. As satellite activities, the working groups of CCPR (Consultative Committee for Photometry and Radiometry) and the MOBY project arranged meetings at the Grand Wailea before and after the Conference. The Conference was attended by more than a hundred registered participants from five continents, which matches the number of foreign participants of NEWRAD 2008 at KRISS. A total of 153 papers were presented at NEWRAD 2011, of which 10 were invited talks and 100 posters. The poster sessions during the extended lunch breaks created a stimulating atmosphere for lively discussions and exchange of ideas. A technical visit was arranged to the astronomical observatory at the summit of Haleakala volcano, where some of the world's most advanced telescope systems are operated. The relaxed Hawaiian life, nearby ocean and excellent weather conditions gave an unprecedented flavour to this NEWRAD Conference. The abstract classification system was renewed for NEWRAD 2011, consisting of the following categories: EAO: Earth observation SSR: Solar/stellar radiometry SBR: Source-based radiometry OPM: Optical properties of materials/components DBR: Detector-based radiometry SFR: Single/few-photon radiometry. The new system worked well for refereeing and program purposes. Conference proceedings containing two-page extended abstracts were

Soil pore-gas sampling by photoacoustic radiometry

DOE Office of Scientific and Technical Information (OSTI.GOV)

Sollid, J.E.

1994-11-01

Concentrations of volatile organics in a soil pore-gas plume were measured using a commercially available multigas monitor. The monitor is a photoacoustic radiometer (PAR) controlled by an on-board, programmable microprocessor. The measurements determine the extent and location of the vapor plume in the subsurface. At least twelve wells surrounding the sources are measured quarterly. The sources are located in former liquid chemical waste disposal pits and shafts at Los Alamos National Laboratory. The primary constituents of the plume are 1,1,1 trichloroethane (TCA), trichloroethene (TCE), and tetrachloroethene or perchloroethene or perchloroethene (PCE). Four quarters of data are presented for TCA. Allmore » were used primarily as solvents and degreasers. Previously the composition of the vapor plume was determined by Gas Chromatography Mass Spectrometer GCMS methods. Photoacoustic radiometry and gas chromatography are discussed giving the advantages and disadvantages of each method, although in this program they are basically complementary. Gas chromatography is a more qualitative method to determine which analytes are present and the approximate concentration. Photoacoustic radiometry, to function well, requires foreknowledge of constituents and serves best to determine how much is present. Measurements are quicker and more direct with photoacoustic methods. Once the constituents to be measured are known, the cost to monitor is much less using photoacoustics, and the results are available more quickly.« less

100 years of photometry and radiometry

NASA Astrophysics Data System (ADS)

Hardis, Jonathan E.

2001-06-01

Measurement of light is an old subject, though the past 100 years have seen significant advances. 100 years ago, photometry - the art and science of measuring light as it is perceived by people - had the greater technological importance. Even today SI (the metric system) retains a base unit for photometry, the candela. However, early work at NBS included pivotal projects in the field of radiometry - the measurement of the physical characteristics of light. These included the validation of Planck's newly-minted theory of blackbody radiation, determining the radiation constants with good accuracy, and the definitive analysis of the spectral responsivity of human vision, so as to relate photometry to radiometry. This latter work has only increased in importance over the past 75 years as the definition of the candela has changed and improved. Today, NIST makes radiometric, and hence photometric measurements, with unprecedented precision. Cryogenic radiometers based on the principle of electrical substitution measure optical flux with uncertainties of 0.02%. Additional facilities enable measurement of spectral responsivity, spectral radiance, and spectral irradiance. Novel detectors, such as light-traps, allow the best accuracy to be transferred from the primary standards to routinely-used instruments and to calibration customers. Filtered detectors are used to realize photometric scales, radiation temperature scales, and other specialized measurements. Indeed, the story of the metrology of light is the story of continuous improvement, both driven by and enabled by advances in technology. We touch upon some of these as a prelude to the other talks in this Conference.

SABER: A computational method for identifying active sites for new reactions

PubMed Central

Nosrati, Geoffrey R; Houk, K N

2012-01-01

A software suite, SABER (Selection of Active/Binding sites for Enzyme Redesign), has been developed for the analysis of atomic geometries in protein structures, using a geometric hashing algorithm (Barker and Thornton, Bioinformatics 2003;19:1644–1649). SABER is used to explore the Protein Data Bank (PDB) to locate proteins with a specific 3D arrangement of catalytic groups to identify active sites that might be redesigned to catalyze new reactions. As a proof-of-principle test, SABER was used to identify enzymes that have the same catalytic group arrangement present in o-succinyl benzoate synthase (OSBS). Among the highest-scoring scaffolds identified by the SABER search for enzymes with the same catalytic group arrangement as OSBS were l-Ala d/l-Glu epimerase (AEE) and muconate lactonizing enzyme II (MLE), both of which have been redesigned to become effective OSBS catalysts, demonstrated by experiments. Next, we used SABER to search for naturally existing active sites in the PDB with catalytic groups similar to those present in the designed Kemp elimination enzyme KE07. From over 2000 geometric matches to the KE07 active site, SABER identified 23 matches that corresponded to residues from known active sites. The best of these matches, with a 0.28 Å catalytic atom RMSD to KE07, was then redesigned to be compatible with the Kemp elimination using RosettaDesign. We also used SABER to search for potential Kemp eliminases using a theozyme predicted to provide a greater rate acceleration than the active site of KE07, and used Rosetta to create a design based on the proteins identified. PMID:22492397

SABER: a computational method for identifying active sites for new reactions.

PubMed

Nosrati, Geoffrey R; Houk, K N

2012-05-01

A software suite, SABER (Selection of Active/Binding sites for Enzyme Redesign), has been developed for the analysis of atomic geometries in protein structures, using a geometric hashing algorithm (Barker and Thornton, Bioinformatics 2003;19:1644-1649). SABER is used to explore the Protein Data Bank (PDB) to locate proteins with a specific 3D arrangement of catalytic groups to identify active sites that might be redesigned to catalyze new reactions. As a proof-of-principle test, SABER was used to identify enzymes that have the same catalytic group arrangement present in o-succinyl benzoate synthase (OSBS). Among the highest-scoring scaffolds identified by the SABER search for enzymes with the same catalytic group arrangement as OSBS were L-Ala D/L-Glu epimerase (AEE) and muconate lactonizing enzyme II (MLE), both of which have been redesigned to become effective OSBS catalysts, demonstrated by experiments. Next, we used SABER to search for naturally existing active sites in the PDB with catalytic groups similar to those present in the designed Kemp elimination enzyme KE07. From over 2000 geometric matches to the KE07 active site, SABER identified 23 matches that corresponded to residues from known active sites. The best of these matches, with a 0.28 Å catalytic atom RMSD to KE07, was then redesigned to be compatible with the Kemp elimination using RosettaDesign. We also used SABER to search for potential Kemp eliminases using a theozyme predicted to provide a greater rate acceleration than the active site of KE07, and used Rosetta to create a design based on the proteins identified. Copyright © 2012 The Protein Society.

Familia and Comunidad-Based Saberes: Learning in an Indigenous Heritage Community

ERIC Educational Resources Information Center

Urrieta, Luis, Jr.

2013-01-01

This article explores how children and youth learned indigenous heritage "saberes" (knowings) through intent community participation in Nocutzepo, Mexico. The "familia" (family) and "comunidad" (community)-based saberes were valuable for skills acquisition, but most important for learning indigenous forms of…

SABER: The Searchable Annotated Bibliography of Education Research in Astronomy

NASA Astrophysics Data System (ADS)

Bruning, David H.; Bailey, J. M.; Brissenden, G.

2006-12-01

Starting a new research project in astronomy education is hard because the literature is scattered throughout many journals. Relevant astronomy education research may be in psychology journals, science education journals, physics education journals, or even in science journals themselves. Tracking the vast realm of literature is difficult, especially since libraries do not carry many of these journals and related abstracting services. SABER is an online resource (http://astronomy.uwp.edu/saber/) that was started in 2001 specifically to reduce this “scatter” by compiling into one place an annotated bibliography of relevant education research articles. The database now includes more than 150 articles specifically addressing astronomy education research. Visit SABER and see what it can do for you.

Water vapor radiometry research and development phase

NASA Technical Reports Server (NTRS)

Resch, G. M.; Chavez, M. C.; Yamane, N. L.; Barbier, K. M.; Chandlee, R. C.

1985-01-01

This report describes the research and development phase for eight dual-channel water vapor radiometers constructed for the Crustal Dynamics Project at the Goddard Space Flight Center, Greenbelt, Maryland, and for the NASA Deep Space Network. These instruments were developed to demonstrate that the variable path delay imposed on microwave radio transmissions by atmospheric water vapor can be calibrated, particularly as this phenomenon affects very long baseline interferometry measurement systems. Water vapor radiometry technology can also be used in systems that involve moist air meteorology and propagation studies.

Ancient DNA: Saber-Toothed Cats Are the Same Beasts After All.

PubMed

Meachen, Julie A

2017-11-06

Ancient DNA from the saber-toothed cat Homotherium reveals that the late Pleistocene species from Europe and North America were the same. Homotherium turns out to be only distantly related to the well-known saber-toothed Smilodon. Copyright © 2017 Elsevier Ltd. All rights reserved.

The Responses of Ozone Density to Solar Activity in the Mesopause Region and the Mutual Relationship Based on SABER Measurements During 2002-2016

NASA Astrophysics Data System (ADS)

Tang, Chaoli; Wu, Bo; Wei, Yuanyuan; Qing, Chun; Dai, Congming; Li, Jianyu; Wei, Heli

2018-04-01

This paper is aimed to investigate the mutual relationship between ozone-density at cold-point mesopause (O3-CPM) and solar activity globally using Sounding of the Atmosphere using Broadband Emission Radiometry (SABER) measurements and the 10.7 cm-solar-radio-flux (F10.7) data set. For this purpose, the global latitude regions are divided into 16 latitude bins. The global changes of O3-CPM are presented in mesopause region during 2002-2016. SABER has documented dramatic variability in O3-CPM on time scale of the 11-year solar cycle. The observed changes in the global O3-CPM correlate well with the changes in solar activity during 2002-2016 with correlation coefficient of 0.92, and the global solar response of O3-CPM is (20.18 ± 2.24)%/100 solar flux units in mesopause. Then, the latitudinal distribution of O3-CPM and its solar cycle dependence are presented for 16 latitude bins. The latitudinal correlation analysis shows that the O3-CPM is significantly correlated to the solar cycle at or above the 95% confidence level for each latitude bin from 84°S to 70°N, and the correlation coefficients are remarkably higher in the southern hemisphere than for corresponding latitudes in the northern hemisphere. The latitudinal distribution of O3-CPM takes on a W shape on a global scale, and the distribution of solar response of O3-CPM is seen in a strong south-north asymmetry between the two hemispheres. The solar response of O3-CPM in latitudinal distribution decreases gradually from the southern hemisphere to the northern hemisphere, and the standard deviation of solar response increases gradually from the equator to the pole in each hemisphere.

SABER: The Searchable Annotated Bibliography of Education Research in Astronomy

NASA Astrophysics Data System (ADS)

Bruning, David; Bailey, Janelle M.; Brissenden, Gina

Starting a new research project can be a challenge, but especially so in education research because the literature is scattered throughout many journals. Relevant astronomy education research may be in psychology journals, science education journals, physics education journals, or even in science journals. Tracking the vast realm of literature is difficult, especially because libraries frequently do not subscribe to many of the relevant journals and abstracting services. The Searchable Annotated Bibliography of Education Research (SABER) is an online resource that was started to service the needs of the astronomy education community, specifically to reduce this "scatter" by compiling an annotated bibliography of education research articles in one electronic location. Although SABER started in 2001, the database has a new URL—http://astronom- y.uwp.edu/saber/—and has recently undergone a major update.

Investigating the Role of Gravity Wave on Equatorial Ionospheric Irregularities using SABER and C/NOFS Satellites Observations

NASA Astrophysics Data System (ADS)

Nigussie, M.; Damtie, B.; Moldwin, M.; Yizengaw, E.; Tesema, F.; Tebabal, A.

2017-12-01

Theoretical simulations have shown that gravity wave (GW) seeded perturbations amplified by Rayleigh-Taylor Instability (RTI) results in ESF (equatorial spread F); however, there have been limited observational studies using simultaneous observations of GW and ionospheric parameters. In this paper, for the fist time, simultaneous atmospheric temperature perturbation profiles that are due to GWs obtained from Sounding of the Atmosphere using Broadband Emission Radiometry (SABER) on-board the TIMED satellite and equatorial in -situ ion density and vertical plasma drift velocity observations with and without ESF activity obtained from C/NOFS satellites are used to investigate the effect of GW on the generation of ESF. The horizontal and vertical wavelengths of ionospheric oscillations and GWs respectively have been estimated applying wavelet transforms. Cross wavelet analysis has also been applied between two closely observed profiles of temperature perturbations to estimate the horizontal wavelength of the GWs. Moreover, vertically propagating GWs that dissipate energy at the upper atmosphere have been investigated using spectral analysis compared with theoretical results. The analysis show that when the ion density shows strong post sunset irregularity between 20 and 24 LT, vertically upward drift velocities increase between 17 and 19 LT, but it becomes vertically downward when the ion density shows smooth variation. The horizontal wavelengths estimated from C/NOFS and SABER observations show excellent agreement when ion density observations show strong fluctuations; otherwise, they have poor agreement. It is also found that altitude profiles of potential energy of GW increases up to 90 km and then decreases significantly. It is found that the vertical wavelength of GW, corresponding to the dominant spectral power, ranges from about 7 km to 20 km regardless of the situation of the ionosphere; however, GWs with vertical wavelengths between 100 m to 1 km are found to

Temperature responses to the 11 year solar cycle in the mesosphere from the 31 year (1979-2010) extended Canadian Middle Atmosphere Model simulations and a comparison with the 14 year (2002-2015) TIMED/SABER observations

NASA Astrophysics Data System (ADS)

Gan, Quan; Du, Jian; Fomichev, Victor I.; Ward, William E.; Beagley, Stephen R.; Zhang, Shaodong; Yue, Jia

2017-04-01

A recent 31 year simulation (1979-2010) by extended Canadian Middle Atmosphere Model (eCMAM30) and the 14 year (2002-2015) observation by the Thermosphere Ionosphere Mesosphere and Dynamics/Sounding of the Atmosphere using Broadband Emssion Radiometry (TIMED/SABER) are utilized to investigate the temperature response to the 11 year solar cycle on the mesosphere. Overall, the zonal mean responses tend to increase with height, and the amplitudes are on the order of 1-2 K/100 solar flux unit (1 sfu = 10-22 W m-2 Hz-1) below 80 km and 2-4 K/100 sfu in the mesopause region (80-100 km) from the eCMAM30, comparatively weaker than those from the SABER except in the midlatitude lower mesosphere. A pretty good consistence takes place at around 75-80 km with a response of 1.5 K/100 sfu within 10°S/N. Also, a symmetric pattern of the responses about the equator agrees reasonably well between the two. It is noteworthy that the eCMAM30 displays an alternate structure with the upper stratospheric cooling and the lower mesospheric warming at midlatitudes of the winter hemisphere, in favor of the long-term Rayleigh lidar observation reported by the previous studies. Through diagnosing multiple dynamical parameters, it is manifested that this localized feature is induced by the anomalous residual circulation as a consequence of the wave-mean flow interaction during the solar maximum year.

Experimental evaluation of theoretical sea surface reflectance factors relevant to above-water radiometry.

PubMed

Zibordi, Giuseppe

2016-03-21

Determination of the water-leaving radiance L_W through above-water radiometry requires knowledge of accurate reflectance factors ρ of the sea surface. Publicly available ρ relevant to above-water radiometry include theoretical data sets generated: i. by assuming a sky radiance distribution accounting for aerosols and multiple scattering, but neglecting polarization, and quantifying sea surface effects through Cox-Munk wave slope statistics; or differently ii. accounting for polarization, but assuming an ideal Rayleigh sky radiance distribution, and quantifying sea surface effects through modeled wave elevation and slope variance spectra. The impact on above-water data products of differences between those factors ρ was quantified through comparison of L_W from the Ocean Color component of the Aerosol Robotic Network (AERONET-OC) with collocated L_W from in-water radiometry. Results from the analysis of radiance measurements from the sea performed with 40 degrees viewing angle and 90 degrees azimuth offset with respect to the sun plane, indicated a slightly better agreement between above- and in-water L_W determined for wind speeds tentatively lower than 4 m s^-1 with ρ computed accounting for aerosols, multiple scattering and Cox-Munk surfaces. Nevertheless, analyses performed by partitioning the investigated data set also indicated that actual ρ values would exhibit dependence on sun zenith comprised between those characterizing the two sets of reflectance factors.

Titan's surface from Cassini RADAR SAR and high resolution radiometry data of the first five flybys

USGS Publications Warehouse

Paganelli, F.; Janssen, M.A.; Stiles, B.; West, R.; Lorenz, R.D.; Lunine, J.I.; Wall, S.D.; Callahan, P.; Lopes, R.M.; Stofan, E.; Kirk, R.L.; Johnson, W.T.K.; Roth, L.; Elachi, C.; ,

2007-01-01

The first five Titan flybys with Cassini's Synthetic Aperture RADAR (SAR) and radiometer are examined with emphasis on the calibration and interpretation of the high-resolution radiometry data acquired during the SAR mode (SAR-radiometry). Maps of the 2-cm wavelength brightness temperature are obtained coincident with the SAR swath imaging, with spatial resolution approaching 6 km. A preliminary calibration shows that brightness temperature in these maps varies from 64 to 89 K. Surface features and physical properties derived from the SAR-radiometry maps and SAR imaging are strongly correlated; in general, we find that surface features with high radar reflectivity are associated with radiometrically cold regions, while surface features with low radar reflectivity correlate with radiometrically warm regions. We examined scatterplots of the normalized radar cross-section ??0 versus brightness temperature, finding differing signatures that characterize various terrains and surface features. Implications for the physical and compositional properties of these features are discussed. The results indicate that volume scattering is important in many areas of Titan's surface, particularly Xanadu, while other areas exhibit complex brightness temperature variations consistent with variable slopes or surface material and compositional properties. ?? 2007 Elsevier Inc.

EDITORIAL: The 10th International Conference on New Developments and Applications in Optical Radiometry (NEWRAD 2008) The 10th International Conference on New Developments and Applications in Optical Radiometry (NEWRAD 2008)

NASA Astrophysics Data System (ADS)

Ikonen, Erkki

2009-08-01

This special issue of Metrologia contains selected papers from the NEWRAD 2008 Conference, held in Daejeon, Korea, on 12-16 October 2008. NEWRAD 2008 continues a series of conferences on radiometry entitled 'New Developments and Applications in Optical Radiometry', which have taken place as follows: Cambridge, MA, USA (1985) Teddington, UK (1988) Davos, Switzerland (1990) Baltimore, MD, USA (1992) Berlin, Germany (1994) Tucson, AZ, USA (1997) Madrid, Spain (1999) Gaithersburg, MD, USA (2002) Davos, Switzerland (2005) Daejeon, Korea (2008) As the first NEWRAD Conference arranged in Asia, NEWRAD 2008 opened a new era for this series of conferences. The conference was followed by a Workshop on High Temperature Fixed Points and meetings of the Working Groups of the Consultative Committee for Photometry and Radiometry (CCPR). The organizer of all these events was Dr In Won Lee of the Korea Research Institute of Standards and Science (KRISS). The NEWRAD Scientific Committee thanks him and his team for their tremendous efforts which maintained and developed the high standards of previous NEWRAD Conferences. The specific themes of NEWRAD 2008 included optical measurements related to displays, energy and terahertz applications. Furthermore, half a day of sessions was devoted to both remote sensing and to few-photon sources and detectors. A total of 140 papers were presented, including 11 invited and 30 contributed talks. The conference proceedings containing two-page extended abstracts were distributed to the participants as a paper volume and on a USB memory stick. The authors of selected contributions were invited to submit a full paper for this special issue. The submitted papers were handled by the normal reviewing procedures of Metrologia. On behalf of the Scientific Committee, I thank the reviewers and editorial staff of Metrologia for careful processing of the manuscripts. It is evident that this special issue, like its predecessors, will serve as an important

Mesospheric temperatures estimated from the meteor radar observations at Mohe, China

NASA Astrophysics Data System (ADS)

Liu, Libo; Liu, Huixin; Chen, Yiding; Le, Huijun

2017-04-01

In this work, we report the estimation of mesospheric temperatures at 90 km height from the observations of the VHF all-sky meteor radar operated at Mohe (53.5 °N, 122.3° E), China, since August 2011. The kinetic temperature profiles retrieved from the observations of Sounding of the Atmosphere using Broadband Emission Radiometry (SABER) onboard the Thermosphere, Ionosphere, Mesosphere, Energetics, and Dynamics (TIMED) satellite are processed to provide the temperature (TSABER) and temperature gradient (dT/dh) at 90 km height. Based on the SABER temperature profile data an empirical dT/dh model is developed for the Mohe latitude. First, we derive the temperatures from the meteor decay times (Tmeteor) and the Mohe dT/dh model gives prior information of temperature gradients. Secondly, the full-width of half maximum (FWHM) of the meteor height profiles is calculated and further used to deduce the temperatures (TFWHM) based on the strong linear relationship between FWHM and TSABER. The temperatures at 90 km deduced from the decay times (Tmeteor) and from the meteor height distributions (TFWHM) at Mohe are validated/calibrated with TSABER. The temperatures present a considerable annual variation, being maximum in winter and minimum in summer. Harmonic analyses reveal that the temperatures have an annual variation consistent with TSABER. Our work suggests that the FWHM has a good performance in routine estimation of the temperatures. It should be pointed out that the slope of FWHM and TSABER is 10.1 at Mohe, which is different from that of 15.71 at King Sejong (62.2° S, 58.8° E) station. Acknowledgments The TIMED/SABER kinetic temperature (version 2.0) data are provided by the SABER team through http://saber.gats-inc.com/. The temperatures from the NRLMSISE-00 model are calculated using Aerospace Blockset toolbox of MATLAB (2016a). This research was supported by National Natural Science Foundation of China (41231065, 41321003). We acknowledge the use of meteor radar

Estimation of Mesospheric Densities at Low Latitudes Using the Kunming Meteor Radar Together With SABER Temperatures

NASA Astrophysics Data System (ADS)

Yi, Wen; Xue, Xianghui; Reid, Iain M.; Younger, Joel P.; Chen, Jinsong; Chen, Tingdi; Li, Na

2018-04-01

Neutral mesospheric densities at a low latitude have been derived during April 2011 to December 2014 using data from the Kunming meteor radar in China (25.6°N, 103.8°E). The daily mean density at 90 km was estimated using the ambipolar diffusion coefficients from the meteor radar and temperatures from the Sounding of the Atmosphere using Broadband Emission Radiometry (SABER) instrument. The seasonal variations of the meteor radar-derived density are consistent with the density from the Mass Spectrometer and Incoherent Scatter (MSIS) model, show a dominant annual variation, with a maximum during winter, and a minimum during summer. A simple linear model was used to separate the effects of atmospheric density and the meteor velocity on the meteor radar peak detection height. We find that a 1 km/s difference in the vertical meteor velocity yields a change of approximately 0.42 km in peak height. The strong correlation between the meteor radar density and the velocity-corrected peak height indicates that the meteor radar density estimates accurately reflect changes in neutral atmospheric density and that meteor peak detection heights, when adjusted for meteoroid velocity, can serve as a convenient tool for measuring density variations around the mesopause. A comparison of the ambipolar diffusion coefficient and peak height observed simultaneously by two co-located meteor radars indicates that the relative errors of the daily mean ambipolar diffusion coefficient and peak height should be less than 5% and 6%, respectively, and that the absolute error of the peak height is less than 0.2 km.

Cassini radar and radiometry observations of Saturn's airless icy satellites

NASA Astrophysics Data System (ADS)

Le Gall, A. A.; West, R.; Janssen, M. A.; Leyrat, C.; Bonnefoy, L.; Lellouch, E.

2017-12-01

The Cassini Radar is a multimode microwave sensor operating in the Ku-band, at a wavelength of 2.2 cm. While it was initially designed to examine the surface of Titan through the veil of its optically-opaque atmosphere, it is occasionally used to observe airless Saturn's moons from long ranges (>50 000 km) and, less frequently, during targeted flybys. In its active mode, the instrument measures the surface reflectivity in the backscattering direction. In its passive mode - or radiometry mode - it records the microwave thermal emission from the near-surface (typically few meters). Doing so, it provides insights into the degree of purity and maturity of the water-ice regolith of the investigated objects. In particular, it can reveal hemispheric dichotomies or regional anomalies and satellite-to-satellite variabilities which give clues into what is common and what is specific to the history of each satellite and to the processes that have shaped their surface/subsurface. In this paper, we will give an overview of the Cassini radar/radiometry observations of Saturnian icy moons, most of which have not been published yet. Now that the mission has come to an end, we will describe how the radio investigation of these objects can be pursued from Earth-based radiotelescopes.

Wavelength-modulated differential photothermal radiometry: Theory and experimental applications to glucose detection in water

NASA Astrophysics Data System (ADS)

Mandelis, Andreas; Guo, Xinxin

2011-10-01

A differential photothermal radiometry method, wavelength-modulated differential photothermal radiometry (WM-DPTR), has been developed theoretically and experimentally for noninvasive, noncontact biological analyte detection, such as blood glucose monitoring. WM-DPTR features analyte specificity and sensitivity by combining laser excitation by two out-of-phase modulated beams at wavelengths near the peak and the base line of a prominent and isolated mid-IR analyte absorption band (here the carbon-oxygen-carbon bond in the pyran ring of the glucose molecule). A theoretical photothermal model of WM-DPTR signal generation and detection has been developed. Simulation results on water-glucose phantoms with the human blood range (0-300 mg/dl) glucose concentration demonstrated high sensitivity and resolution to meet wide clinical detection requirements. The model has also been validated by experimental data of the glucose-water system obtained using WM-DPTR.

Foreword to the Special Issue on the 11th Specialist Meeting on Microwave Radiometry and Remote Sensing Applications (MicroRad 2010)

NASA Technical Reports Server (NTRS)

Le Vine, David M; Jackson, Thomas J.; Kim, Edward J.; Lang, Roger H.

2011-01-01

The Specialist Meeting on Microwave Radiometry and Remote Sensing of the Environment (MicroRad 2010) was held in Washington, DC from March 1 to 4, 2010. The objective of MicroRad 2010 was to provide an open forum to report and discuss recent advances in the field of microwave radiometry, particularly with application to remote sensing of the environment. The meeting was highly successful, with more than 200 registrations representing 48 countries. There were 80 oral presentations and more than 100 posters. MicroRad has become a venue for the microwave radiometry community to present new research results, instrument designs, and applications to an audience that is conversant in these issues. The meeting was divided into 16 sessions (listed in order of presentation): 1) SMOS Mission; 2) Future Passive Microwave Remote Sensing Missions; 3) Theory and Physical Principles of Electromagnetic Models; 4) Field Experiment Results; 5) Soil Moisture and Vegetation; 6) Snow and Cryosphere; 7) Passive/Active Microwave Remote Sensing Synergy; 8) Oceans; 9) Atmospheric Sounding and Assimilation; 10) Clouds and Precipitation; 11) Instruments and Advanced Techniques I; 12) Instruments and Advanced Techniques II; 13) Cross Calibration of Satellite Radiometers; 14) Calibration Theory and Methodology; 15) New Technologies for Microwave Radiometry; 16) Radio Frequency Interference.

Water Vapor Remote Sensing Techniques: Radiometry and Solar Spectrometry

NASA Astrophysics Data System (ADS)

Somieski, A.; Buerki, B.; Cocard, M.; Geiger, A.; Kahle, H.-G.

The high variability of atmospheric water vapor content plays an important role in space geodesy, climatology and meteorology. Water vapor has a strong influence on transatmospheric satellite signals, the Earth's climate and thus the weather forecasting. Several remote sensing techniques have been developed for the determination of inte- grated precipitable water vapor (IPWV). The Geodesy and Geodynamics Lab (GGL) utilizes the methods of Water Vapor Radiometry and Solar Spectrometry to quantify the amount of tropospheric water vapor and its temporal variations. The Water Vapor Radiometer (WVR) measures the radiation intensity of the atmosphere in a frequency band ranging from 20 to 32 GHz. The Solar Atmospheric MOnitoring Spectrome- ter (SAMOS) of GGL is designed for high-resolution measurements of water vapor absorption lines using solar radiation. In the framework of the ESCOMPTE (ExpÊrience sur Site pour COntraindre les Mod- Éles de Pollution atmosphÊrique et de Transport d'Emissions) field campaign these instruments have been operated near Marseille in 2001. They have aquired a long time series of integrated precipitable water vapor content (IPWV). The accuracy of IPWV measured by WVR and SAMOS is 1 kg/m2. Furthermore meteorological data from radiosondes were used to calculate the IPWV in order to provide comparisons with the results of WVR and SAMOS. The methods of Water Vapor Radiometry and So- lar Spectrometry will be discussed and first preliminary results retrieved from WVR, SAMOS and radiosondes during the ESCOMPTE field campaign will be presented.

SABER: A Theater Level Wargame

DTIC Science & Technology

1991-03-01

theater level conputerized wargame for the Air Force Wargaming Center, Maxwell AFB, Alabama to replace the Theater War Exercise (TWX), also known as... to replace the Theater War Exercise (TWX), also known as Agile. Given a recently developed land battle, this thesis’ effort links US Air Force...compu.eiized wargame for the Air Force Wargaming Center, Maxwell AFB, Alabama to replace the Theater War Exercise (TWX), also known as Agile. Saber is a

Satellite-based observations of tsunami-induced mesosphere airglow perturbations

NASA Astrophysics Data System (ADS)

Yang, Yu-Ming; Verkhoglyadova, Olga; Mlynczak, Martin G.; Mannucci, Anthony J.; Meng, Xing; Langley, Richard B.; Hunt, Linda A.

2017-01-01

Tsunami-induced airglow emission perturbations were retrieved by using space-based measurements made by the Sounding of the Atmosphere using Broad-band Emission Radiometry (SABER) instrument on board the Thermosphere-Ionosphere-Mesosphere Energetics Dynamics spacecraft. At and after the time of the Tohoku-Oki earthquake on 11 March 2011, and the Chile earthquake on 16 September 2015, the spacecraft was performing scans over the Pacific Ocean. Significant ( 10% relative to the ambient emission profiles) and coherent nighttime airglow perturbations were observed in the mesosphere following Sounding of the Atmosphere using Broad-band Emission Radiometry limb scans intercepting tsunami-induced atmospheric gravity waves. Simulations of emission variations are consistent with the physical characteristics of the disturbances at the locations of the corresponding SABER scans. Airglow observations and model simulations suggest that atmospheric neutral density and temperature perturbations can lead to the observed amplitude variations and multipeak structures in the emission profiles. This is the first time that airglow emission rate perturbations associated with tsunamis have been detected with space-based measurements.

Studying the MLT by a Combined Analysis of SABER/TIMED and Lidar Measurements

NASA Technical Reports Server (NTRS)

Feofilov, A. G.; Kutepov, A. A.; Pesnell, W. D.; Goldberg, R. A.; Zecha, M.; Gerding, M.; Luebken, F. J.; Fiedler, J.; vonZhan, U.; Russell, J. M., III

2006-01-01

The SABER instrument on board the TIMED Satellite is a limb scanning infrared radiometer designed to measure temperature and minor constituent vertical profiles and energetics parameters in the mesosphere and lower thermosphere (MLT). The measurements have been performed continuously since January 25, 2002 to provide excellent coverage for both hemispheres. The Leibniz-Institute of Atmospheric Physics (LAP) at Kuehlungsborn, Germany (54N, 12E) operates two lidar instruments, using three different temperature measurement methods, optimized for three altitude ranges. The total altitude range of the lidar installation lies from 1 to 105 km. Another instrument used for intercomparison is the ALOMAR RMR lidar, located at Andoya, Norway (69N, 16E). We have searched the SABER and lidar datasets for coincidental common volume measurements within plus or minus 1 degree in latitude, plus or minus 2 degrees in longitude and approx. 1 hour in time for the sake of (a) comparison of measured temperatures; (b) validation of the models used in SABER data analysis; and (c) extracting new information about MLT parameters. In this work we applied the non-LTE ALI-ARMS code designed to calculate the nonequilibrium radiance in different viewing geometries to the analysis of measurements which satisfied these search criteria. The results of this analysis (a) support the application of higher value of CO2-O quenching rate (6e-12 cubic centimeters per second) by the non-LTE temperature retrievals from the SABER 15 micrometer limb radiance data, and (b) demonstrate the importance of accounting for the vibrational-vibrational energy exchange among the CO2 isotopes for accurate temperature retrievals. Using temperature profiles obtained in lidar measurements as inputs for the retrieval algorithm we also retrieved the nighttime CO2 densities from the SABER 15 micrometer limb radiances and compared them with the model and climatology CO2 data used in the SABER nighttime temperature retrievals.

Radiometry rocks

NASA Astrophysics Data System (ADS)

Harvey, James E.

2012-10-01

Professor Bill Wolfe was an exceptional mentor for his graduate students, and he made a major contribution to the field of optical engineering by teaching the (largely ignored) principles of radiometry for over forty years. This paper describes an extension of Bill's work on surface scatter behavior and the application of the BRDF to practical optical engineering problems. Most currently-available image analysis codes require the BRDF data as input in order to calculate the image degradation from residual optical fabrication errors. This BRDF data is difficult to measure and rarely available for short EUV wavelengths of interest. Due to a smooth-surface approximation, the classical Rayleigh-Rice surface scatter theory cannot be used to calculate BRDFs from surface metrology data for even slightly rough surfaces. The classical Beckmann-Kirchhoff theory has a paraxial limitation and only provides a closed-form solution for Gaussian surfaces. Recognizing that surface scatter is a diffraction process, and by utilizing sound radiometric principles, we first developed a linear systems theory of non-paraxial scalar diffraction in which diffracted radiance is shift-invariant in direction cosine space. Since random rough surfaces are merely a superposition of sinusoidal phase gratings, it was a straightforward extension of this non-paraxial scalar diffraction theory to develop a unified surface scatter theory that is valid for moderately rough surfaces at arbitrary incident and scattered angles. Finally, the above two steps are combined to yield a linear systems approach to modeling image quality for systems suffering from a variety of image degradation mechanisms. A comparison of image quality predictions with experimental results taken from on-orbit Solar X-ray Imager (SXI) data is presented.

Directional Radiometry and Radiative Transfer: the Convoluted Path From Centuries-old Phenomenology to Physical Optics

NASA Technical Reports Server (NTRS)

Mishchenko, Michael I.

2014-01-01

This Essay traces the centuries-long history of the phenomenological disciplines of directional radiometry and radiative transfer in turbid media, discusses their fundamental weaknesses, and outlines the convoluted process of their conversion into legitimate branches of physical optics.

Unexpected East-West effect in mesopause region SABER temperatures over El Leoncito

NASA Astrophysics Data System (ADS)

Reisin, Esteban R.; Scheer, Jürgen

2017-05-01

We find that mesopause region temperatures determined by the SABER instrument on the TIMED satellite during nocturnal overpasses at El Leoncito (31.8°S, 69.3°W) are several kelvins higher when SABER observes from the East than when it observes from the West. We distinguish between altitudes corresponding to the nominal emission heights of the OH and O2 airglow layers. The East-West temperature differences of 4.5 K obtained for OH-equivalent height, and of 3.5 K for O2-equivalent height are surprising, because an effect of the South Atlantic Anomaly on SABER temperature is unexpected. However, the ground-based data obtained with our airglow spectrometer at El Leoncito show that such a SABER artifact can be ruled out. Rather, the phenomenon is explained as a consequence of the temporal sampling of the nocturnal variation, which is mostly due to the semidiurnal tide. The monthly mean tide is strongest from April to September with a mean amplitude of 6.9 K for OH, and of 10.5 K for O2 rotational temperature, but the contribution to the East-West effect varies strongly from month to month because of differences in the temporal sampling. This mechanism should be active at other sites, as well.

Dynamics of controllably induced bruises assessed by diffuse reflectance spectroscopy and pulsed photothermal radiometry

NASA Astrophysics Data System (ADS)

Marin, Ana; Milanič, Matija; Verdel, Nina; Vidovič, Luka; Majaron, Boris

2018-02-01

Combination of diffuse reflectance spectroscopy (DRS) and pulsed photothermal radiometry (PPTR) was recently successfully used to study evolution of accidental traumatic bruises. Yet, accidental bruises introduce many unknowns into the evolution analysis and thus a more controllable and repeatable approach for bruising is desired. In this study, evolution of bruises induced by aluminum projectiles of known mass and velocity were studied by DRS and PPTR. Bruises were induced on volar forearm skin of two healthy volunteers. Inverse Monte Carlo including four-layer skin model, was used to analyze the DRS and PPTR data to determine skin chromophores, their concentrations and depths. For bruise analysis, a bruise model was constructed and evolved according to hemoglobin diffusion kinetics. Bruise analysis of PPTR signals yielded bruise evolution parameters, most importantly hemoglobin diffusion constant, hemoglobin decomposition time and blood pool depth. The study results show that chronological tracking of hemoglobin decomposition can be assessed by the combined DRS and PPTR technique on induced bruise. Parameters of individual bruises were compared and two trends in chronological behavior of hemoglobin decomposition time discerned. Changes in bruise diffuse reflectance spectra were noted. Induced bruise parameters, however, still showed some scatter and thus further research is needed to reduce bruise variability.

Kapitza thermal resistance studied by high-frequency photothermal radiometry

DOE Office of Scientific and Technical Information (OSTI.GOV)

Horny, Nicolas; Chirtoc, Mihai; Hamaoui, Georges

2016-07-18

Kapitza thermal resistance is determined using high-frequency photothermal radiometry (PTR) extended for modulation up to 10 MHz. Interfaces between 50 nm thick titanium coatings and silicon or stainless steel substrates are studied. In the used configuration, the PTR signal is not sensitive to the thermal conductivity of the film nor to its optical absorption coefficient, thus the Kapitza resistance is directly determined from single thermal parameter fits. Results of thermal resistances show the significant influence of the nature of the substrate, as well as of the presence of free electrons at the interface.

Monitoring local heating around an interventional MRI antenna with RF radiometry

PubMed Central

Ertürk, M. Arcan; El-Sharkawy, AbdEl-Monem M.; Bottomley, Paul A.

2015-01-01

Purpose: Radiofrequency (RF) radiometry uses thermal noise detected by an antenna to measure the temperature of objects independent of medical imaging technologies such as magnetic resonance imaging (MRI). Here, an active interventional MRI antenna can be deployed as a RF radiometer to measure local heating, as a possible new method of monitoring device safety and thermal therapy. Methods: A 128 MHz radiometer receiver was fabricated to measure the RF noise voltage from an interventional 3 T MRI loopless antenna and calibrated for temperature in a uniformly heated bioanalogous gel phantom. Local heating (ΔT) was induced using the antenna for RF transmission and measured by RF radiometry, fiber-optic thermal sensors, and MRI thermometry. The spatial thermal sensitivity of the antenna radiometer was numerically computed using a method-of-moment electric field analyses. The gel’s thermal conductivity was measured by MRI thermometry, and the localized time-dependent ΔT distribution computed from the bioheat transfer equation and compared with radiometry measurements. A “H-factor” relating the 1 g-averaged ΔT to the radiometric temperature was introduced to estimate peak temperature rise in the antenna’s sensitive region. Results: The loopless antenna radiometer linearly tracked temperature inside a thermally equilibrated phantom up to 73 °C to within ±0.3 °C at a 2 Hz sample rate. Computed and MRI thermometric measures of peak ΔT agreed within 13%. The peak 1 g-average temperature was H = 1.36 ± 0.02 times higher than the radiometric temperature for any media with a thermal conductivity of 0.15–0.50 (W/m)/K, indicating that the radiometer can measure peak 1 g-averaged ΔT in physiologically relevant tissue within ±0.4 °C. Conclusions: Active internal MRI detectors can serve as RF radiometers at the MRI frequency to provide accurate independent measures of local and peak temperature without the artifacts that can accompany MRI thermometry or

Monitoring local heating around an interventional MRI antenna with RF radiometry

DOE Office of Scientific and Technical Information (OSTI.GOV)

Ertürk, M. Arcan; El-Sharkawy, AbdEl-Monem M.; Bottomley, Paul A., E-mail: bottoml@mri.jhu.edu

Purpose: Radiofrequency (RF) radiometry uses thermal noise detected by an antenna to measure the temperature of objects independent of medical imaging technologies such as magnetic resonance imaging (MRI). Here, an active interventional MRI antenna can be deployed as a RF radiometer to measure local heating, as a possible new method of monitoring device safety and thermal therapy. Methods: A 128 MHz radiometer receiver was fabricated to measure the RF noise voltage from an interventional 3 T MRI loopless antenna and calibrated for temperature in a uniformly heated bioanalogous gel phantom. Local heating (ΔT) was induced using the antenna for RFmore » transmission and measured by RF radiometry, fiber-optic thermal sensors, and MRI thermometry. The spatial thermal sensitivity of the antenna radiometer was numerically computed using a method-of-moment electric field analyses. The gel’s thermal conductivity was measured by MRI thermometry, and the localized time-dependent ΔT distribution computed from the bioheat transfer equation and compared with radiometry measurements. A “H-factor” relating the 1 g-averaged ΔT to the radiometric temperature was introduced to estimate peak temperature rise in the antenna’s sensitive region. Results: The loopless antenna radiometer linearly tracked temperature inside a thermally equilibrated phantom up to 73 °C to within ±0.3 °C at a 2 Hz sample rate. Computed and MRI thermometric measures of peak ΔT agreed within 13%. The peak 1 g-average temperature was H = 1.36 ± 0.02 times higher than the radiometric temperature for any media with a thermal conductivity of 0.15–0.50 (W/m)/K, indicating that the radiometer can measure peak 1 g-averaged ΔT in physiologically relevant tissue within ±0.4 °C. Conclusions: Active internal MRI detectors can serve as RF radiometers at the MRI frequency to provide accurate independent measures of local and peak temperature without the artifacts that can accompany MRI

Chapter 3: Design of the Saber-Tooth Project.

ERIC Educational Resources Information Center

Ward, Phillip

1999-01-01

Used data from interviews, surveys, and document analysis to describe the methods and reform processes of the Saber Tooth Project, examining selection of sites; demographics (school sites, teachers, data sources, and project assumptions); and project phases (development, planning, implementation, and support). The project's method of reform was…

Saber-sheath trachea as a marker of severe airflow obstruction in chronic obstructive pulmonary disease.

PubMed

Ciccarese, Federica; Poerio, Antonio; Stagni, Silvia; Attinà, Domenico; Fasano, Luca; Carbonara, Paolo; Bacchi Reggiani, Maria Letizia; Zompatori, Maurizio

2014-02-01

Saber-sheath trachea is a specific radiographic parameter for chronic obstructive pulmonary disease (COPD), which consists of marked coronal narrowing associated with sagittal widening (tracheal index <2/3-0.67). The aim of this study was to investigate the correlation between saber-sheath trachea and clinical-radiological findings in a group of patients with COPD of varying severity. We evaluated the chest radiographs of 71 patients with COPD distributed as follows: GOLD class I, 8/71 (11.3 %); class II, 34/71 (47.9 %); class III, 16/71(22.5 %); class IV, 13/71 (18.3 %). In 52/71 (73.2 %) patients we also evaluated chest computed tomography (CT) scans. We analyzed the prevalence of saber-sheath trachea and its correlation with the Tiffenau index, GOLD stage and radiological signs of COPD. Moreover, we evaluated the sensitivity, specificity and accuracy of chest radiography as compared to CT taken as the gold standard, and the correlation between the radiographic and CT tracheal index. Saber-sheath trachea was found in 18/71 (25.4 %) patients, with a greater prevalence in patients with lower Tiffenau Index (p = 0.02), GOLD stages III-IV and visual severity score 3 (severe) on chest CT. Saber-sheath trachea was not found to be related to other radiological signs of COPD. The sensitivity, specificity and accuracy values of radiography were 72.2, 97.0 and 88.5 %, with perfect concordance between the radiographic and CT tracheal index (p < 0.00001). Saber-sheath trachea is linked to the functional severity of airway obstruction, but not to other radiological signs of COPD. Thus, evaluation of the trachea at chest radiography is strongly recommended.

Cassini SAR, radiometry, scatterometry and altimetry observations of Titan's dune fields

USGS Publications Warehouse

Le, Gall A.; Janssen, M.A.; Wye, L.C.; Hayes, A.G.; Radebaugh, J.; Savage, C.; Zebker, H.; Lorenz, R.D.; Lunine, J.I.; Kirk, R.L.; Lopes, R.M.C.; Wall, S.; Callahan, P.; Stofan, E.R.; Farr, Tom

2011-01-01

Large expanses of linear dunes cover Titan's equatorial regions. As the Cassini mission continues, more dune fields are becoming unveiled and examined by the microwave radar in all its modes of operation (SAR, radiometry, scatterometry, altimetry) and with an increasing variety of observational geometries. In this paper, we report on Cassini's radar instrument observations of the dune fields mapped through May 2009 and present our key findings in terms of Titan's geology and climate. We estimate that dune fields cover ???12.5% of Titan's surface, which corresponds to an area of ???10millionkm2, roughly the area of the United States. If dune sand-sized particles are mainly composed of solid organics as suggested by VIMS observations (Cassini Visual and Infrared Mapping Spectrometer) and atmospheric modeling and supported by radiometry data, dune fields are the largest known organic reservoir on Titan. Dune regions are, with the exception of the polar lakes and seas, the least reflective and most emissive features on this moon. Interestingly, we also find a latitudinal dependence in the dune field microwave properties: up to a latitude of ???11??, dune fields tend to become less emissive and brighter as one moves northward. Above ???11?? this trend is reversed. The microwave signatures of the dune regions are thought to be primarily controlled by the interdune proportion (relative to that of the dune), roughness and degree of sand cover. In agreement with radiometry and scatterometry observations, SAR images suggest that the fraction of interdunes increases northward up to a latitude of ???14??. In general, scattering from the subsurface (volume scattering and surface scattering from buried interfaces) makes interdunal regions brighter than the dunes. The observed latitudinal trend may therefore also be partially caused by a gradual thinning of the interdunal sand cover or surrounding sand sheets to the north, thus allowing wave penetration in the underlying

High-efficiency non-uniformity correction for wide dynamic linear infrared radiometry system

NASA Astrophysics Data System (ADS)

Li, Zhou; Yu, Yi; Tian, Qi-Jie; Chang, Song-Tao; He, Feng-Yun; Yin, Yan-He; Qiao, Yan-Feng

2017-09-01

Several different integration times are always set for a wide dynamic linear and continuous variable integration time infrared radiometry system, therefore, traditional calibration-based non-uniformity correction (NUC) are usually conducted one by one, and furthermore, several calibration sources required, consequently makes calibration and process of NUC time-consuming. In this paper, the difference of NUC coefficients between different integration times have been discussed, and then a novel NUC method called high-efficiency NUC, which combines the traditional calibration-based non-uniformity correction, has been proposed. It obtains the correction coefficients of all integration times in whole linear dynamic rangesonly by recording three different images of a standard blackbody. Firstly, mathematical procedure of the proposed non-uniformity correction method is validated and then its performance is demonstrated by a 400 mm diameter ground-based infrared radiometry system. Experimental results show that the mean value of Normalized Root Mean Square (NRMS) is reduced from 3.78% to 0.24% by the proposed method. In addition, the results at 4 ms and 70 °C prove that this method has a higher accuracy compared with traditional calibration-based NUC. In the meantime, at other integration time and temperature there is still a good correction effect. Moreover, it greatly reduces the number of correction time and temperature sampling point, and is characterized by good real-time performance and suitable for field measurement.

Validation of microwave radiometry for measuring the internal temperature profile of human tissue

NASA Astrophysics Data System (ADS)

Levick, A.; Land, D.; Hand, J.

2011-06-01

A phantom target with a known linear temperature gradient has been developed for validating microwave radiometry for measuring internal temperature profiles within human tissue. The purpose of the phantom target is to simulate the temperature gradient found within the surface layers of a baby's brain during hypothermal neuroprotection therapy, in which the outer surface of the phantom represents the skin surface and the inner surface the brain core. The target comprises a volume of phantom tissue material with similar dielectric properties to high water-content human tissue, contained between two copper plates at known temperatures. The antenna of a microwave radiometer is in contact with one surface of the phantom material. We have measured the microwave temperature of the phantom with microwave radiometry in a frequency band of 3.0-3.5 GHz. Our microwave temperature measurements have small 0.05 °C (type A) uncertainties associated with random effects and provide temperatures consistent with values determined using theoretical models of the antenna-target system within uncertainties. The measurements are in good agreement with the major signal contribution being formed over a near plane-wave response within the material with a much smaller contribution from close to the antenna face.

New formulations of bupivacaine for the treatment of postoperative pain: liposomal bupivacaine and SABER-Bupivacaine.

PubMed

Skolnik, Aaron; Gan, Tong J

2014-08-01

Although generally considered both safe and effective, local anesthetics are often used in conjunction with opioids postoperatively in part because of the limited duration of drug action of local anesthetics. Much interest exists in extending the duration of local anesthetics' effects, which may reduce the requirement for opioid pain medications that are frequently associated with side effects, including nausea and vomiting, pruritus and respiratory depression. This article introduces liposomal bupivacaine and SABER®-Bupivacaine, two new formulations of bupivacaine that increase the duration of analgesia postoperatively through two novel slow-release technologies. The pharmacodynamics, pharmacokinetics, efficacy and safety of both preparations of bupivacaine are reviewed. An electronic database search conducted using the Cochrane Central Register of Controlled Trials and MEDLINE/PubMed with the following search terms: 'bupivacaine,' 'liposomal bupivacaine', 'liposome bupivacaine', 'Exparel', 'SABER-Bupivacaine', 'SABER Bupivacaine', and 'SABER' yielded 90 articles (no language or date of publication restrictions were imposed). Clinical trials involving liposomal bupivacaine and SABER-Bupivacaine indicate that both safely prolong analgesia, while decreasing opioid requirements when compared with placebo. However, additional clinical studies are necessary to better determine the efficacy and cost-effectiveness of these long-acting local anesthetic formulations.

Chapter 1: An Introduction to the Saber-Tooth Project.

ERIC Educational Resources Information Center

Ward, Phillip

1999-01-01

Introduces a theme issue on the Saber-Tooth Project, an ongoing reform effort involving a university and school district that collaborate to improve middle school physical education by improving teaching conditions and engaging teachers in professional development emphasizing curriculum improvement. The monograph explains the nature of…

Kelvin waves: a comparison study between SABER and normal mode analysis of ECMWF data

NASA Astrophysics Data System (ADS)

Blaauw, Marten; Garcia, Rolando; Zagar, Nedjeljka; Tribbia, Joe

2014-05-01

Equatorial Kelvin waves spectra are sensitive to the multi-scale variability of their source of tropical convective forcing. Moreover, Kelvin wave spectra are modified upward by changes in the background winds and stability. Recent high resolution data from observations as well as analyses are capable of resolving the slower Kelvin waves with shorter vertical wavelength near the tropical tropopause. In this presentation, results from a quantitive comparison study of stratospheric Kelvin waves in satellite data (SABER) and analysis data from the ECMWF operational archive will be shown. Temperature data from SABER is extracted over a six year period (2007-2012) with an effective vertical resolution of 2 km. Spectral power of stratospheric Kelvin waves in SABER data is isolated by selecting symmetric and eastward spectral components in the 8-20 days range. Global data from ECMWF operational analysis is extracted for the same six years on 91 model levels (top level at 0.01 hPa) and 25 km horizontal resolution. Using three-dimensional orthogonal normal-mode expansions, the input mass and wind data from ECMWF is projected onto balanced rotational modes and unbalanced inertia-gravity modes, including spectral data for pure Kelvin waves. The results show good agreement between Kelvin waves in SABER and ECMWF analyses data for: (i) the frequency shift of Kelvin wave variance with height and (ii) vertical wavelengths. Variability with respect to QBO will also be discussed. In a previous study, discrepancies in the upper stratosphere were found to be 60% and are found here to be 10% (8-20 day averaged value), which can be explained by the better stratosphere representation in the 91 model level version of the ECMWF operational model. New discrepancies in Kelvin wave variance are found in the lower stratosphere at 20 km. Averaged spectral power over the 8-20 day range is found to be 35% higher in ECMWF compared to SABER data. We compared results at 20 km with additional

Tower-Perturbation Measurements in Above-Water Radiometry

NASA Technical Reports Server (NTRS)

Hooker, Stanford B. (Editor); Firestone, Elaine R. (Editor); Zibordi, Giuseppe; Berthon, Jean-Francois; DAlimonte, Davide; vanderLinde, Dirk; Brown, James W.

2003-01-01

This report documents the scientific activities which took place during June 2001 and June 2002 on the Acqua Alta Oceanographic Tower (AAOT) in the northern Adriatic Sea. The primary objective of these field campaigns was to quantify the effect of platform perturbations (principally reflections of sunlight onto the sea surface) on above-water measurements of water-leaving radiances. The deployment goals documented in this report were to: a) collect an extensive and simultaneous set of above- and in-water optical measurements under predominantly clear-sky conditions; b) establish the vertical properties of the water column using a variety of ancillary measurements, many of which were taken coincidently with the optical measurements; and c) determine the bulk properties of the environment using a diversity of atmospheric, biogeochemical, and meteorological techniques. A preliminary assessment of the data collected during the two field campaigns shows the perturbation in above-water radiometry caused by a large offshore structure is very similar to that caused by a large research vessel.

Intra-seasonal Oscillations Inferred from SABER (TIMED) and MLS (UARS) Temperature Measurements

NASA Technical Reports Server (NTRS)

Huang, F. T.; Mayr, H. G.; Russell, J.; Mlynczak, M.; Reber, C. A.; Mengel, J. G.

2006-01-01

In the zonal mean meridional winds of the upper mesosphere, intra-seasonal oscillations with periods between 1 and 4 months have been inferred from UARS measurements and independently predicted with the Numerical Spectral Model WSM). The wind oscillations tend to be confined to low latitudes and appear to be driven, at least in part, by small-scale gravity waves propagating in the meridional direction. Winds across the equator should generate, due to dynamical heating and cooling, temperature oscillations with opposite phase in the two hemispheres. Investigating this phenomenon, we have analyzed SABER temperatures from TIMED in the altitude range between 55 and 95 km to delineate with an empirical model, the year-long variability of the migrating tides and zonal mean components. The inferred seasonal variations of the diurnal tide, characterized by amplitude maxima near equinox, are in substantial agreement with UARS observations and results from the NSM. For the zonal mean, the dominant seasonal variations in the SABER temperatures, with annual (12 months) and semiannual (6 months) periodicities, agree well with those derived from UARS measurements. The intra-seasonal variations with periods between 2 and 4 months have amplitudes close to 2 K, almost half as large as those for the dominant seasonal variations. Their amplitudes are in qualitative agreement with the corresponding values inferred from UARS during different years. The SABER and UARS temperature variations reveal pronounced hemispherical asymmetries, consistent with meridional wind oscillations across the equator. The phase of the semi-annual temperature oscillations from the NSM agrees with the observations from UARS and SABER. But the amplitudes are systematically smaller, which may indicate that planetary waves are more important than is allowed for in the model. For the shorter-period intra-seasonal variations, which can be generated by gravity wave drag, the model results are generally in better

Evolutionary History of Saber-Toothed Cats Based on Ancient Mitogenomics.

PubMed

Paijmans, Johanna L A; Barnett, Ross; Gilbert, M Thomas P; Zepeda-Mendoza, M Lisandra; Reumer, Jelle W F; de Vos, John; Zazula, Grant; Nagel, Doris; Baryshnikov, Gennady F; Leonard, Jennifer A; Rohland, Nadin; Westbury, Michael V; Barlow, Axel; Hofreiter, Michael

2017-11-06

Saber-toothed cats (Machairodontinae) are among the most widely recognized representatives of the now largely extinct Pleistocene megafauna. However, many aspects of their ecology, evolution, and extinction remain uncertain. Although ancient-DNA studies have led to huge advances in our knowledge of these aspects of many other megafauna species (e.g., mammoths and cave bears), relatively few ancient-DNA studies have focused on saber-toothed cats [1-3], and they have been restricted to short fragments of mitochondrial DNA. Here we investigate the evolutionary history of two lineages of saber-toothed cats (Smilodon and Homotherium) in relation to living carnivores and find that the Machairodontinae form a well-supported clade that is distinct from all living felids. We present partial mitochondrial genomes from one S. populator sample and three Homotherium sp. samples, including the only Late Pleistocene Homotherium sample from Eurasia [4]. We confirm the identification of the unique Late Pleistocene European fossil through ancient-DNA analyses, thus strengthening the evidence that Homotherium occurred in Europe over 200,000 years later than previously believed. This in turn forces a re-evaluation of its demography and extinction dynamics. Within the Machairodontinae, we find a deep divergence between Smilodon and Homotherium (∼18 million years) but limited diversity between the American and European Homotherium specimens. The genetic data support the hypothesis that all Late Pleistocene (or post-Villafrancian) Homotherium should be considered a single species, H. latidens, which was previously proposed based on morphological data [5, 6]. Copyright © 2017 Elsevier Ltd. All rights reserved.

Target contrast considerations in millimeter wave radiometry for airborne navigation

NASA Technical Reports Server (NTRS)

Mayer, A.

1971-01-01

Target signal requirements for aircraft navigation systems that use radiometric receivers which map thermally emitted power radiated by terrain or power radiated by ground-based beacons are discussed. For selected millimeter wavelength bands, microwaves suffer relatively little degradation by absorption or scattering on passage through the atmosphere, despite extreme weather variations. Interest centers on 8-millimeter waves because of component availability, portability (small size), high image resolution, and all-weather capability at this wavelength. The idea of radiometric airborne navigation is introduced. Elements of radiometry, terrain radiation, and atmospheric transmission characteristics are reviewed. Data pertaining to these elements at 8 mm wavelength are collected. Calculation of radiometric contrasts is discussed for some simple models of terrain targets.

High-resolution submillimeter-wave radiometry of supersonic flow

NASA Technical Reports Server (NTRS)

Dionne, G. F.; Weiss, J. A.; Fitzgerald, J. F.; Fetterman, H. R.; Litvak, M. M.

1983-01-01

The recent development of a high-resolution submillimeter-wave heterodyne radiometer has made possible the first measurements of H2O molecule rotational line excitation temperatures and detailed profiles in supersonic flow. Absorption signals were measured across the flow for the 2/11/ from 2//02/ (752 GHz) para-H2O rotational transition against a hot background. These signals decrease downstream owing to the volume expansion of the gas away from the sonic nozle exit in the high-vacuum chamber. Radiative transfer calculations based on the large-velocity-gradient approximation and multilevel statistical equilibrium agree with these results and with the measured spectral line shapes. The data reveal nearly isentropic gas expansion and cooling. These studies have shown that submillimeter-wave heterodyne radiometry can be useful for remote sensing of supersonic flow with low mass flux, provided the signal transmission is through a dry or thin atmosphere.

Multibaseline gravitational wave radiometry

DOE Office of Scientific and Technical Information (OSTI.GOV)

Talukder, Dipongkar; Bose, Sukanta; Mitra, Sanjit

2011-03-15

We present a statistic for the detection of stochastic gravitational wave backgrounds (SGWBs) using radiometry with a network of multiple baselines. We also quantitatively compare the sensitivities of existing baselines and their network to SGWBs. We assess how the measurement accuracy of signal parameters, e.g., the sky position of a localized source, can improve when using a network of baselines, as compared to any of the single participating baselines. The search statistic itself is derived from the likelihood ratio of the cross correlation of the data across all possible baselines in a detector network and is optimal in Gaussian noise.more » Specifically, it is the likelihood ratio maximized over the strength of the SGWB and is called the maximized-likelihood ratio (MLR). One of the main advantages of using the MLR over past search strategies for inferring the presence or absence of a signal is that the former does not require the deconvolution of the cross correlation statistic. Therefore, it does not suffer from errors inherent to the deconvolution procedure and is especially useful for detecting weak sources. In the limit of a single baseline, it reduces to the detection statistic studied by Ballmer [Classical Quantum Gravity 23, S179 (2006).] and Mitra et al.[Phys. Rev. D 77, 042002 (2008).]. Unlike past studies, here the MLR statistic enables us to compare quantitatively the performances of a variety of baselines searching for a SGWB signal in (simulated) data. Although we use simulated noise and SGWB signals for making these comparisons, our method can be straightforwardly applied on real data.« less

Remote sensing of the atmosphere of Mars using infrared pressure modulation and filter radiometry

NASA Technical Reports Server (NTRS)

Mccleese, D. J.; Schofield, J. T.; Zurek, R. W.; Martonchik, J. V.; Haskins, R. D.

1986-01-01

The study of the atmosphere and climate of Mars will soon be advanced considerably by the Mars Observer mission. This paper describes the atmospheric sounder for this mission and how it will measure key Martian atmospheric parameters using IR gas correlation and filter radiometry. The instrument now under development will provide high-resolution vertical profiles of atmospheric temperature, pressure, water vapor, dust, and clouds using limb sounding techniques as well as nadir observations of surface thermal properties and polar radiative balance.

Photothermal Radiometry and Diffuse Reflectance Analysis of Thermally Treated Bones

NASA Astrophysics Data System (ADS)

Trujillo, S.; Martínez-Torres, P.; Quintana, P.; Alvarado-Gil, Juan Jose

2010-05-01

Different fields such as archaeology, biomedicine, forensic science, and pathology involve the analysis of burned bones. In this work, the effects of successive thermal treatments on pig long bones, measured by photothermal radiometry and diffuse reflectance are reported. Measurements were complemented by X-ray diffraction and infrared spectroscopy. Samples were thermally treated for 1 h within the range of 25 °C to 350 °C. The thermal diffusivity and reflectance increase in the low-temperature range, reaching a maximum around 125 °C and decaying at higher temperatures. These results are the consequence of complex modifications occurring in the inorganic and organic bone structure. For lower temperatures dehydration, dehydroxilation, and carbonate loss processes are dominant, followed by collagen denaturing and decompositions, which have an influence on the bone microstructure.

Feasibility Study of Radiometry for Airborne Detection of Aviation Hazards

NASA Technical Reports Server (NTRS)

Gimmestad, Gary G.; Papanicolopoulos, Chris D.; Richards, Mark A.; Sherman, Donald L.; West, Leanne L.; Johnson, James W. (Technical Monitor)

2001-01-01

Radiometric sensors for aviation hazards have the potential for widespread and inexpensive deployment on aircraft. This report contains discussions of three aviation hazards - icing, turbulence, and volcanic ash - as well as candidate radiometric detection techniques for each hazard. Dual-polarization microwave radiometry is the only viable radiometric technique for detection of icing conditions, but more research will be required to assess its usefulness to the aviation community. Passive infrared techniques are being developed for detection of turbulence and volcanic ash by researchers in this country and also in Australia. Further investigation of the infrared airborne radiometric hazard detection approaches will also be required in order to develop reliable detection/discrimination techniques. This report includes a description of a commercial hyperspectral imager for investigating the infrared detection techniques for turbulence and volcanic ash.

Fundamental principles of absolute radiometry and the philosophy of this NBS program (1968 to 1971)

NASA Technical Reports Server (NTRS)

Geist, J.

1972-01-01

A description is given work performed on a program to develop an electrically calibrated detector (also called absolute radiometer, absolute detector, and electrically calibrated radiometer) that could be used to realize, maintain, and transfer a scale of total irradiance. The program includes a comprehensive investigation of the theoretical basis of absolute detector radiometry, as well as the design and construction of a number of detectors. A theoretical analysis of the sources of error is also included.

New nighttime retrievals of O(3P) and OH densities in the mesosphere/lower thermosphere using SABER/TIMED observations

NASA Astrophysics Data System (ADS)

Panka, P.; Kutepov, A. A.; Kalogerakis, K. S.; Janches, D.; Feofilov, A.; Rezac, L.; Marsh, D. R.; Yigit, E.

2017-12-01

We present first retrievals of O(3P) and OH densities in the mesosphere/lower thermosphere (MLT) using SABER/TIMED OH 2.0 and 1.6 μm limb emission observations. Recently, Kaufmann et al. [2014] reported that current SABER O(3P) densities are on average 30% higher compared to other observations. In this study we applied new detailed non-LTE model [Panka et al. 2017] of nighttime OH(v), which accounts for the new mechanism OH(v≥5)+O(3P)→O(1D)+OH(v-5) of energy transfer recently suggested by Sharma et al. [2015] and confirmed through laboratory studies by Kalogerakis et al. [2016]. Based on this model we developed a new self-consistent two channel retrieval approach for O(3P) and OH density. Using this approach, we retrieved O(3P) densities that are 10-40% lower than current SABER O(3P), as well as total OH density which is retrieved for the first time using SABER observations. We compare our retrieveals with the results of other observations and models. As it was recently shown by Panka et al. [2017], the new mechanism of OH quenching produces a significant pumping of CO2 4.3 µm emission. We discuss the effects these new O(3P) and OH retrievals have on the nighttime CO2 density retrievals from the SABER 4.3 µm channel.

Chapter 7: Lessons, Conclusions, and Implications of the Saber-Tooth Project.

ERIC Educational Resources Information Center

Ward, Phillip; Doutis, Panayiotis; Evans, Sharon A.

1999-01-01

Summarizes findings from the Saber-Tooth Project related to systemic change and student learning, concluding that vision is everything; workplace conditions must be addressed at multiple levels; strong relationships exist among planning, teaching, and assessment; and improvement in reform may occur due to the cessation of business as usual. This…

Microwave-derived soil moisture over Mediterranean land uses: from ground-based radiometry to SMOS first observations

NASA Astrophysics Data System (ADS)

Saleh, Kauzar; Antolín, Carmen; Juglea, Silvia; Kerr, Yann; Millán-Scheiding, Cristina; Novello, Nathalie; Pardé, Mickael; Wigneron, Jean-Pierre; Zribi, Mehrez; López-Baeza, Ernesto

2010-05-01

This communication will present the main results of a series of airborne and ground-based experiments conducted at the Valencia Anchor Station (VAS) site for the implementation of the SMOS emission model L-MEB (L-band Microwave Emission model of the Biosphere, Wigneron et al., 2007), and will evaluate the performance of L-MEB against SMOS measurements. The L-MEB model has been implemented in the context of the SMOS mission and through numerous radiometry experiments over different land uses. Within L-MEB, each land use is characterised by model parameterisations that are used to describe the radiative transfer at L-band. They describe, for instance, the attenuation properties of different canopies, or the effect of soil roughness on the surface emission. In recent years, the Valencia Anchor Station site (VAS) has hosted various radiometry experiments. These were performed at different scales, from the plot scale to the regional scale (up to 50 km), using ground-based and airborne-based radiometry. The main results are discussed in this communication, and some preliminary comparisons with SMOS measurements are presented. 1) Ground-based experiments. MELBEX-I was a ground-radiometry experiment run in 2005 using the L-band radiometer EMIRAD over a plot of shrub land. We will present results from this experiment (Cano et al., 2009), that highlighted a constant (and small) contribution of Mediterranean shrub land to the overall emission, and investigated the role of exposed rocks in the surface emission. MELBEX-II was a ground-radiometry experiment run in 2007 using the EMIRAD L-band radiometer over a plot of vineyards throughout the whole vegetation cycle. Vineyards are the main land use at the VAS site, therefore parameterisations for vineyards are key for the validation of SMOS data at VAS. This communication will discuss, in particular, estimates of microwave surface roughness throughout the crop year, and changes in the canopy microwave properties throughout the

Tower-Perturbation Measurements in Above-Water Radiometry. Volume 23

NASA Technical Reports Server (NTRS)

Hooker, Stanford B. (Editor); Firestone, Elaine R. (Editor); Zibordi, Giuseppe; Berthon, Jean-Francois; D'Alimonte, Davide; vanderLinde, Dirk; Brown, James W.

2003-01-01

This report documents the scientific activities which took place during June 2001 and June 2002 on the Acqua Alta Oceanographic Tower (AAOT) in the northern Adriatic Sea. The primary objective of these field campaigns was to quantify the effect of platform perturbations (principally reflections of sunlight onto the sea surface) on above-water measurements of water-leaving radiances. The deployment goals documented in this report were to: a) collect an extensive and simultaneous set of above- and in-water optical measurements under predominantly clear-sky conditions; b) establish the vertical properties of the water column using a variety of ancillary measurements, many of which were taken coincidently with the optical measurements; and c) determine the bulk properties of the environment using a diversity of atmospheric, biogeochemical, and meteorological techniques. A preliminary assessment of the data collected during the two field campaigns shows the perturbation in above-water radiometry caused by a large offshore structure is very similar to that caused by a large research vessel.

MATADOR: Mars Atmosphere Tempeature And Density Orbiting Radiometer

NASA Astrophysics Data System (ADS)

Mlynczak, M. G.; Johnson, D. G.; Brown, S.; Esplin, R.; Miller, J.

2006-12-01

We describe a new instrument designed to observe the temperature, pressure, density, and composition of the Martian atmosphere with unprecedented accuracy and precision. The MATADOR instrument is a 12-channel limb scanning infrared radiometer and is an improved design based upon the highly successful Sounding of the Atmosphere using Broadband Emission Radiometry (SABER) instrument that has now achieved five years of operation in Earth orbit on the NASA TIMED mission. The twelve discrete MATADOR channels span a wavelength range from 1.27 um to 22.2 um. The focal plane is cooled by a small mechanical cryocooler. The mass of the instrument is approximately one-half that of the SABER-TIMED instrument. MATADOR is more than twice as sensitive as the SABER instrument. In addition to temperature and density, MATADOR will also provide vertical profiles of dust opacity (at several wavelengths), water vapor, water ice, carbon monoxide, carbon dioxide, and ozone. The instrument design and anticipated performance are reviewed, along with detailed simulations of the retrievals of Martian atmospheric composition.

Zonal-Mean Temperature Variations Inferred from SABER Measurements on TIMED Compared with UARS Observations

NASA Technical Reports Server (NTRS)

Huang, Frank T.; Mayr, Hans; Russell, James; Mlynczak, Marty; Reber, Carl A.

2005-01-01

In the Numerical Spectral Model (NSM, Mayr et al., 2003), small-scale gravity waves propagating in the north/south direction can generate zonal mean (m = 0) meridional wind oscillations with periods between 2 and 4 months. These oscillations tend to be confined to low latitudes and have been interpreted to be the meridional counterpart of the wave-driven Quasi Biennial Oscillation in the zonal circulation. Wave driven meridional winds across the equator should generate, due to dynamical heating and cooling, temperature oscillations with opposite phase in the two hemispheres. We have analyzed SABER temperature measurements in the altitude range between 55 and 95 km to investigate the existence such variations. Because there are also strong tidal signatures (up to approximately 20 K) in the data, our algorithm estimates both mean values and tides together from the data. Based on SABER temperature data, the intra-annual variations with periods between 2 and 4 months can have amplitudes up to 5 K or more, depending on the altitude. Their amplitudes are in qualitative agreement with those inferred Erom UARS data (from different years). The SABER temperature variations also reveal pronounced hemispherical asymmetries, which are qualitatively consistent with wave driven meridional wind oscillations across the equator. Oscillations with similar periods have been seen in the meridional winds based on UARS data (Huang and Reber, 2003).

Study of blood flow sensing with microwave radiometry

NASA Technical Reports Server (NTRS)

Porter, R. A.; Wentz, F. J., III

1973-01-01

A study and experimental investigation has been performed to determine the feasibility of measuring regional blood flow and volume in man by means of microwave radiometry. An indication was expected of regional blood flow from measurement of surface and subsurface temperatures with a sensitive radiometer. Following theoretical modeling of biological tissue, to determine the optimum operating frequency for adequate sensing depth, a sensitive microwave radiometer was designed for operation at 793 MHz. A temperature sensitivity of of 0.06 K rms was realized in this equipment. Measurements performed on phantom tissue models, consisting of beef fat and lean beefsteak showed that the radiometer was capable of sensing temperatures from a depth between 3.8 and 5.1 cm. Radiometric and thermodynamic temperature measurements were also performed on the hind thighs of large dogs. These showed that the radiometer could sense subsurface temperatures from a depth of, at least, 1.3 cm. Delays caused by externally-generated RF interference, coupled with the lack of reliable blood flow measurement equipment, prevented correlation of radiometer readings with reginal blood flow. For the same reasons, it was not possible to extend the radiometric observations to human subjects.

Storm/Quiet Ratio Comparisons Between TIMED/SABER NO (sup +)(v) Volume Emission Rates and Incoherent Scatter Radar Electron Densities at E-Region Altitudes

NASA Technical Reports Server (NTRS)

Fernandez, J. R.; Mertens, C. J.; Bilitza, D.; Xu, X.; Russell, J. M., III; Mlynczak, M. G.

2009-01-01

Broadband infrared limb emission at 4.3 microns is measured by the TIMED/SABER instrument. At night, these emission observations at E-region altitudes are used to derive the so called NO+(v) Volume Emission Rate (VER). NO+(v) VER can be derived by removing the background CO2(v3) 4.3 microns radiance contribution using SABER-based non-LTE radiation transfer models, and by performing a standard Abel inversion on the residual radiance. SABER observations show that NO+(v) VER is significantly enhanced during magnetic storms in accordance with increased ionization of the neutral atmosphere by auroral electron precipitation, followed by vibrational excitation of NO+ (i.e., NO+(v)) from fast exothermic ion-neutral reactions, and prompt infrared emission at 4.3 m. Due to charge neutrality, the NO+(v) VER enhancements are highly correlated with electron density enhancements, as observed for example by Incoherent Scatter Radar (ISR). In order to characterize the response of the storm-time E-region from both SABER and ISR measurements, a Storm/Quiet ratio (SQR) quantity is defined as a function of altitude. For SABER, the SQR is the ratio of the storm-to-quiet NO+(v) VER. SQR is the storm-to-quiet ratio of electron densities for ISR. In this work, we compare SABER and ISR SQR values between 100 to 120 km. Results indicate good agreement between these measurements. SQR values are intended to be used as a correction factor to be included in an empirical storm-time correction to the International Reference Ionosphere model at E-region altitudes.

Non-invasive Glucose Measurements Using Wavelength Modulated Differential Photothermal Radiometry (WM-DPTR)

NASA Astrophysics Data System (ADS)

Guo, X.; Mandelis, A.; Zinman, B.

2012-11-01

Wavelength-modulated differential laser photothermal radiometry (WM-DPTR) is introduced for potential development of clinically viable non-invasive glucose biosensors. WM-DPTR features unprecedented glucose-specificity and sensitivity by combining laser excitation by two out-of-phase modulated beams at wavelengths near the peak and the baseline of a prominent and isolated mid-IR glucose absorption band. Measurements on water-glucose phantoms (0 to 300 mg/dl glucose concentration) demonstrate high sensitivity to meet wide clinical detection requirements ranging from hypoglycemia to hyperglycemia. The measurement results have been validated by simulations based on fully developed WM-DPTR theory. For sensitive and accurate glucose measurements, the key is the selection and tight control of the intensity ratio and the phase shift of the two laser beams.

Conducting HIV Seroprevalence and Behavioral Epidemiology Risk Surveys (SABERS) Among Partner Military Populations.

PubMed

Macera, Caroline A; Ito, Stanley I; Hale, Braden R; Shaffer, Richard A; Thomas, Anne G; Dickieson, Janet

2017-01-01

Characterizing HIV infection and associated risk behaviors within military populations is critical for understanding the epidemic and informing prevention activities. However, the prevalence of HIV and related risk behaviors is often unknown. Further, militaries may not have the systems in place or the staff expertise to conduct HIV surveillance and risk behavior studies. The Department of Defense HIV/AIDS Prevention Program (DHAPP), funded by the President's Emergency Plan for AIDS Relief and the US Department of Defense, provides technical assistance, management and administrative support for HIV/AIDS prevention, care and treatment for approximately 65 partner militaries. Collaborating with partner militaries in conducting Seroprevalence and Behavioral Epidemiology Risk Surveys (SABERS) and using the data to monitor the epidemic and inform activities is a key component of DHAPP. This paper describes the methodology used to plan, adapt, implement and report SABERS studies. Copyright© Bentham Science Publishers; For any queries, please email at epub@benthamscience.org.

Analysis of hemodynamics in human skin using photothermal radiometry and diffuse reflectance spectroscopy

NASA Astrophysics Data System (ADS)

Verdel, Nina; Marin, Ana; Vidovič, Luka; Milanič, Matija; Majaron, Boris

2017-07-01

We present a novel methodology for quantitative analysis of hemodynamics in human skin in vivo. Our approach combines pulsed photothermal radiometry (i.e., time-resolved measurements of midinfrared emission from sample surface after exposure to a short light pulse) and diffuse reflectance spectroscopy in visible part of the spectrum. Experimental data are fitted with predictions of a numerical model of light transport in a four-layer skin model (i.e., inverse Monte Carlo), which allows assessment of the layer thicknesses, chromophore contents (e.g., melanin, oxy- and deoxy-hemoglobin), as well as scattering properties. The performance is tested in comparison analysis of healthy skin before and during application of a blood pressure cuff (at 200 mm Hg) for 5 minutes.

Comparative Biomechanical Modeling of Metatherian and Placental Saber-Tooths: A Different Kind of Bite for an Extreme Pouched Predator.

PubMed

Wroe, Stephen; Chamoli, Uphar; Parr, William C H; Clausen, Philip; Ridgely, Ryan; Witmer, Lawrence

2013-01-01

Questions surrounding the dramatic morphology of saber-tooths, and the presumably deadly purpose to which it was put, have long excited scholarly and popular attention. Among saber-toothed species, the iconic North American placental, Smilodon fatalis, and the bizarre South American sparassodont, Thylacosmilus atrox, represent extreme forms commonly forwarded as examples of convergent evolution. For S. fatalis, some consensus has been reached on the question of killing behaviour, with most researchers accepting the canine-shear bite hypothesis, wherein both head-depressing and jaw closing musculatures played a role in delivery of the fatal bite. However, whether, or to what degree, T. atrox may have applied a similar approach remains an open question. Here we apply a three-dimensional computational approach to examine convergence in mechanical performance between the two species. We find that, in many respects, the placental S. fatalis (a true felid) was more similar to the metatherian T. atrox than to a conical-toothed cat. In modeling of both saber-tooths we found that jaw-adductor-driven bite forces were low, but that simulations invoking neck musculature revealed less cranio-mandibular stress than in a conical-toothed cat. However, our study also revealed differences between the two saber-tooths likely reflected in the modus operandi of the kill. Jaw-adductor-driven bite forces were extremely weak in T. atrox, and its skull was even better-adapted to resist stress induced by head-depressors. Considered together with the fact that the center of the arc described by the canines was closer to the jaw-joint in Smilodon, our results are consistent with both jaw-closing and neck musculature playing a role in prey dispatch for the placental, as has been previously suggested. However, for T. atrox, we conclude that the jaw-adductors probably played no major part in the killing bite. We propose that the metatherian presents a more complete commitment to the already

Temperature Trends in the Polar Mesosphere between 2002-2007 using TIMED/SABER Data

NASA Technical Reports Server (NTRS)

Goldberg, Richard A.; Kutepov, Alexander A.; Pesnell, William Dean; Latteck, Ralph; Russell, James M.

2008-01-01

The TIMED Satellite was launched on December 7, 2001 to study the dynamics and energy of the mesosphere and lower thermosphere. The TIMED/SABER instrument is a limb scanning infrared radiometer designed to measure a large number of minor constituents as well as the temperature of the region. In this study, we have concentrated on the polar mesosphere, to investigate the temperature characteristics as a function of spatial and temporal considerations. We used the recently revised SABER dataset (1.07) that contains improved temperature retrievals in the Earth polar summer regions. Weekly averages are used to make comparisons between the winter and summer, as well as to study the variability in different quadrants of each hemisphere. For each year studied, the duration of polar summer based on temperature measurements compares favorably with the PMSE (Polar Mesospheric Summer Echoes) season measured by radar at the ALOMAR Observatory in Norway (69 N). The PMSE period should also define the summer period suitable for the occurrence of polar mesospheric clouds. The unusual short and relatively warm polar summer in the northern hemisphere

Flow characteristics in the airways of a COPD patient with a saber-sheath trachea

NASA Astrophysics Data System (ADS)

Jin, Dohyun; Choi, Haecheon; Lee, Changhyun; Choi, Jiwoong; Kim, Kwanggi

2016-11-01

The chronic obstructive pulmonary disease (COPD) is a lung disease characterized by the irreversible airflow limitation caused by the damaged small airways and air sacs. Although COPD is not a disease of the trachea, many patients with COPD have saber-sheath tracheas. The effects of this morphological change in the trachea geometry on airflow are investigated in the present study. An unstructured finite volume method is used for the simulations during tidal breathing in normal and COPD airways, respectively. During inspiration, local large pressure drop is observed in the saber-sheath region of the COPD patient. During expiration, vortical structures are observed at the right main bronchus of the COPD airway, while the flow in the normal airway remains nearly laminar. High wall shear stress exists at convex regions of both airways during inspiration and expiration. However, due to the morphological changes in the COPD airway, relatively higher wall shear stress is observed in the patient airways.

Seasonal MLT-region nightglow intensities, temperatures, and emission heights at a Southern Hemisphere midlatitude site

NASA Astrophysics Data System (ADS)

Reid, Iain M.; Spargo, Andrew J.; Woithe, Jonathan M.; Klekociuk, Andrew R.; Younger, Joel P.; Sivjee, Gulamabas G.

2017-04-01

We consider 5 years of spectrometer measurements of OH(6-2) and O2(0-1) airglow emission intensities and temperatures made near Adelaide, Australia (35° S, 138° E), between September 2001 and August 2006 and compare them with measurements of the same parameters from at the same site using an airglow imager, with the intensities of the OH(8-3) and O(1S) emissions made with a filter photometer, and with 2 years of Aura MLS (Microwave Limb Sounder) v3.3 temperatures and 4.5 years of TIMED SABER (Thermosphere Ionosphere Mesosphere Energetics and Dynamics Sounding of the Atmosphere using Broadband Emission Radiometry) v2.0 temperatures for the same site. We also consider whether we can recover the actual emission heights from the intercomparison of the ground-based and satellite observations. We find a significant improvement in the correlation between the spectrometer OH and SABER temperatures by interpolating the latter to constant density surfaces determined using a meteor radar.

Mesospheric temperatures estimated from the meteor radar observations at Mohe, China

NASA Astrophysics Data System (ADS)

Liu, Libo; Liu, Huixin; Le, Huijun; Chen, Yiding; Sun, Yang-Yi; Ning, Baiqi; Hu, Lianhuan; Wan, Weixing; Li, Na; Xiong, Jiangang

2017-02-01

In this work, we report the estimation of mesospheric temperatures at 90 km height from the observations of the VHF all-sky meteor radar operated at Mohe (53.5°N, 122.3°E), China, since August 2011. The kinetic temperature profiles retrieved from the observations of Sounding of the Atmosphere using Broadband Emission Radiometry (SABER) on board the Thermosphere, Ionosphere, Mesosphere, Energetics, and Dynamics satellite are processed to provide the temperature (TSABER) and temperature gradient (dT/dh) at 90 km height. Based on the SABER temperature profile data an empirical dT/dh model is developed for the Mohe latitude. First, we derive the temperatures from the meteor decay times (Tmeteor) and the Mohe dT/dh model gives prior information of temperature gradients. Second, the full width at half maximum (FWHM) of the meteor height profiles is calculated and further used to deduce the temperatures (TFWHM) based on the strong linear relationship between FWHM and TSABER. The temperatures at 90 km deduced from the decay times (Tmeteor) and from the meteor height distributions (TFWHM) at Mohe are validated/calibrated with TSABER. The temperatures present a considerable annual variation, being maximum in winter and minimum in summer. Harmonic analyses reveal that the temperatures have an annual variation consistent with TSABER. Our work suggests that FWHM has a good performance in routine estimation of the temperatures. It should be pointed out that the slope of FWHM as a function of TSABER is 10.1 at Mohe, which is different from that of 15.71 at King Sejong (62.2°S, 58.8°E) station.

Photothermal radiometry and modulated luminescence examination of demineralized and remineralized dental lesions

NASA Astrophysics Data System (ADS)

Hellen, A.; Mandelis, A.; Finer, Y.

2010-03-01

Dental caries involves continuous challenges of acid-induced mineral loss and a counteracting process of mineral recovery. As an emerging non-destructive methodology, photothermal radiometry and modulated luminescence (PTR-LUM) has shown promise in measuring changes in tooth mineral content. Human molars (n=37) were subjected to demineralization in acid gel (pH 4.5, 10 days), followed by incubation in remineralisation solutions (pH 6.7, 4 weeks) without or with fluoride (1 or 1000 ppm). PTR-LUM frequency scans (1 Hz - 1 kHz) were performed prior to and during demineralization and remineralization treatments. Transverse Micro-Radiography (TMR) analysis followed at treatment conclusion. The non-fluoridated group exhibited opposite amplitude and phase trends to those of the highly fluoridated group: smaller phase lag and larger amplitude. These results point to a complex interplay between surface and subsurface processes during remineralization, confining the thermal-wave centroid toward the dominating layer.

Comparison between the Temperature Measurements by TIMED/SABER and Lidar in the Mid-Latitude

NASA Technical Reports Server (NTRS)

Xu, Jiyao; She, C. Y.; Yuan, Wei; Mertens, Chris; Mlynczak, Marty; Russell, James

2005-01-01

Comparisons of monthly-mean nighttime temperature profiles observed by the Sodium Lidar at Colorado State University and TIMED/SABER over passes are made. In the altitude range from 85 km to about 100 km, the two observations are in excellent agreement. Though within each other s error bars, important differences occur below 85 km in the entire year and above 100 km in the summer season. Possible reasons for these difference are high photon noise below 85 km in lidar observations, and less than accurate assumptions in the concentration of important chemical species like oxygen (and its quenching rate) in the SABER retrieval above 100 km. However, the two techniques both show the two-level mesopause thermal structure, with the times of change from one level to the other in excellent agreement. Comparison indicates that the high-level (winter) mesopause altitudes are also in excellent agreement between the two observations, though some difference may exist in the low-level (summer) mesopause altitudes between ground-based and satellite-borne data.

SABER (TIMED) and MLS (UARS) Temperature Observations of Mesospheric and Stratospheric QBO and Related Tidal Variations

NASA Technical Reports Server (NTRS)

Huang, Frank T.; Mayr, Hans G.; Reber, Carl A.; Russell, James; Mlynczak, Marty; Mengel, John

2006-01-01

More than three years of temperature observations from the SABER (TIMED) and MLS WARS) instruments are analyzed to study the annual and inter-annual variations extending from the stratosphere into the upper mesosphere. The SABER measurements provide data from a wide altitude range (15 to 95 km) for the years 2002 to 2004, while the MLS data were taken in the 16 to 55 km altitude range a decade earlier. Because of the sampling properties of SABER and MLS, the variations with local solar time must be accounted for when estimating the zonal mean variations. An algorithm is thus applied that delineates with Fourier analysis the year-long variations of the migrating tides and zonal mean component. The amplitude of the diurnal tide near the equator shows a strong semiannual periodicity with maxima near equinox, which vary from year to year to indicate the influence from the Quasi-biennial Oscillation (QBO) in the zonal circulation. The zonal mean QBO temperature variations are analyzed over a range of latitudes and altitudes, and the results are presented for latitudes from 48"s to 48"N. New results are obtained for the QBO, especially in the upper stratosphere and mesosphere, and at mid-latitudes. At Equatorial latitudes, the QBO amplitudes show local peaks, albeit small, that occur at different altitudes. From about 20 to 40 km, and within about 15" of the Equator, the amplitudes can approach 3S K for the stratospheric QBO or SQBO. For the mesospheric QBO or MQBO, we find peaks near 70 km, with temperature amplitudes reaching 3.5"K, and near 85 km, the amplitudes approach 2.5OK. Morphologically, the amplitude and phase variations derived from the SABER and MLS measurements are in qualitative agreement. The QBO amplitudes tend to peak at the Equator but then increase again pole-ward of about 15" to 20'. The phase progression with altitude varies more gradually at the Equator than at mid-latitudes. A comparison of the observations with results from the Numerical Spectral

Global structure and seasonal variability of the migrating terdiurnal tide in the mesosphere and lower thermosphere

NASA Astrophysics Data System (ADS)

Yue, Jia; Xu, Jiyao; Chang, Loren C.; Wu, Qian; Liu, Han-Li; Lu, Xian; Russell, James

2013-12-01

The morphology of the migrating terdiurnal tide with zonal wavenumber 3 (TW3) in the mesosphere and lower thermosphere (MLT) is revealed using the TIMED satellite datasets from the Sounding of the Atmosphere using Broadband Emission Radiometry (SABER) and the TIMED Doppler Interferometer (TIDI) instruments from 2002 to 2009, as well as the Thermosphere Ionosphere Mesosphere Electrodynamics General Circulation Model (TIME-GCM). The annual mean structures of the TW3 from the TIME-GCM clearly resemble the first real symmetric (3,3) Hough mode. The TW3 temperature and zonal wind components have three peaks at midlatitudes and near the equator, while the TW3 meridional wind components show four peaks at mid and low latitudes. These features are consistent with those resolved in SABER temperature and TIDI zonal wind above ~95 km. TW3 components in the TIME-GCM are stronger during winter and spring months at midlatitudes, which is in agreement with previous ground-based radar measurements. On the other hand, TW3 components of temperature, zonal and meridional winds from SABER and TIDI display different seasonal variations at different altitudes and latitudes. The results presented in this paper will provide an observational basis for further modeling study of terdiurnal tide impacts on the thermosphere and ionosphere.

15 years of VLT/UVES OH intensities and temperatures in comparison with TIMED/SABER data

NASA Astrophysics Data System (ADS)

Noll, Stefan; Kimeswenger, Stefan; Proxauf, Bastian; Unterguggenberger, Stefanie; Kausch, Wolfgang; Jones, Amy M.

2017-10-01

The high-resolution echelle spectrograph UVES of the Very Large Telescope at Cerro Paranal in Chile has been regularly operated since April 2000. Thus, UVES archival data originally taken for astronomical projects but also including sky emission can be used to study airglow variations on a time scale longer than a solar cycle. Focusing on OH emission and observations until March 2015, we considered about 3000 high-quality spectra from two instrumental set-ups centred on 760 and 860 nm, which cover about 380 nm each. These data allowed us to measure line intensities for several OH bands in order to derive band intensities and rotational temperatures for different upper vibrational levels as a function of solar activity and observing date. The results were compared with those derived from emission and temperature profile data of the radiometer SABER on the TIMED satellite taken in the Cerro Paranal area between 2002 and 2015. In agreement with the SABER data, the long-term variations in OH intensity and temperature derived from the UVES data are dominated by the solar cycle, whereas secular trends appear to be negligible. Combining the UVES and SABER results, the solar cycle effects for the OH intensity and temperature are about 12-17% and 4-5 K per 100 sfu and do not significantly depend on the selected OH band. The data also reveal that variations of the effective OH emission layer height and air density can cause significant changes in the OH rotational temperatures due to a varying ratio of OH thermalising collisions by air molecules and OH radiation, deactivation, and destruction processes which impede the rotational relaxation. However, this effect appears to be of minor importance for the explanation of the rotational temperature variations related to the solar activity cycle, which causes only small changes in the OH emission profile.

Variability of OH rotational temperatures on time scales from hours to 15 years by kinetic temperature variations, emission layer changes, and non-LTE effects

NASA Astrophysics Data System (ADS)

Noll, Stefan

2016-07-01

Rotational temperatures derived from hydroxyl (OH) line emission are frequently used to study atmospheric temperatures at altitudes of about 87 km. While the measurement only requires intensities of a few bright lines of an OH band, the interpretation can be complicated. Ground-based temperatures are averages for the entire, typically 8 km wide emission layer. Variations in the rotational temperature are then caused by changes of the kinetic temperature and the OH emission profile. The latter can also be accompanied by differences in the layer-averaged efficiency of the thermalisation of the OH rotational level populations. Since this especially depends on the frequency of collisions with O_2, which is low at high altitudes, the non-local thermodynamic equilibrium (non-LTE) contribution to the measured temperatures can be significant and variable. In order to understand the impact of the different sources of OH rotational temperature variations from time scales of hours to a solar cycle, we have studied spectra from the astronomical echelle spectrographs X-shooter and UVES located at Cerro Paranal in Chile. While the X-shooter data spanning 3.5 years allowed us to measure temperatures for 25 OH and two O_2 bands, the UVES spectra cover no more than 10 OH bands simultaneously but a period of about 15 years. These data have been complemented by kinetic temperature and OH and O_2 emission profiles from the multi-channel radiometer SABER on the TIMED satellite. Taking the O_2 and SABER kinetic temperatures as reference and considering the different band-dependent emission profiles, we could evaluate the contribution of non-LTE effects to the measured OH rotational temperatures depending on line set, band, and time. Non-LTE contributions are significant for most bands and can exceed 10 K. The amplitudes of their average nocturnal and seasonal variation are of the order of 1 to 2 K.

Understanding Short-Term Nonmigrating Tidal Variability in the Ionospheric Dynamo Region from SABER Using Information Theory and Bayesian Statistics

NASA Astrophysics Data System (ADS)

Kumari, K.; Oberheide, J.

2017-12-01

Nonmigrating tidal diagnostics of SABER temperature observations in the ionospheric dynamo region reveal a large amount of variability on time-scales of a few days to weeks. In this paper, we discuss the physical reasons for the observed short-term tidal variability using a novel approach based on Information theory and Bayesian statistics. We diagnose short-term tidal variability as a function of season, QBO, ENSO, and solar cycle and other drivers using time dependent probability density functions, Shannon entropy and Kullback-Leibler divergence. The statistical significance of the approach and its predictive capability is exemplified using SABER tidal diagnostics with emphasis on the responses to the QBO and solar cycle. Implications for F-region plasma density will be discussed.

Traceable Radiometry Underpinning Terrestrial- and Helio- Studies (TRUTHS)

USGS Publications Warehouse

Fox, N.; Aiken, J.; Barnett, J.J.; Briottet, X.; Carvell, R.; Frohlich, C.; Groom, S.B.; Hagolle, O.; Haigh, J.D.; Kieffer, H.H.; Lean, J.; Pollock, D.B.; Quinn, T.; Sandford, M.C.W.; Schaepman, M.; Shine, K.P.; Schmutz, W.K.; Teillet, P.M.; Thome, K.J.; Verstraete, M.M.; Zalewski, E.; ,

2002-01-01

The Traceable Radiometry Underpinning Terrestrial- and Helio- Studies (TRUTHS) mission offers a novel approach to the provision of key scientific data with unprecedented radiometric accuracy for Earth Observation (EO) and solar studies, which will also establish well-calibrated reference targets/standards to support other EO missions. This paper will present the TRUTHS mission and its objectives. TRUTHS will be the first satellite mission to calibrate its instrumentation directly to SI in orbit, overcoming the usual uncertainties associated with drifts of sensor gain and spectral shape by using an electrical rather than an optical standard as the basis of its calibration. The range of instruments flown as part of the payload will also provide accurate input data to improve atmospheric radiative transfer codes by anchoring boundary conditions, through simultaneous measurements of aerosols, particulates and radiances at various heights. Therefore, TRUTHS will significantly improve the performance and accuracy of Earth observation missions with broad global or operational aims, as well as more dedicated missions. The provision of reference standards will also improve synergy between missions by reducing errors due to different calibration biases and offer cost reductions for future missions by reducing the demands for on-board calibration systems. Such improvements are important for the future success of strategies such as Global Monitoring for Environment and Security (GMES) and the implementation and monitoring of international treaties such as the Kyoto Protocol. TRUTHS will achieve these aims by measuring the geophysical variables of solar and lunar irradiance, together with both polarised and un-polarised spectral radiance of the Moon, and the Earth and its atmosphere.

The Traceable Radiometry Underpinning Terrestrial and Helio Studies (TRUTHS) mission

NASA Astrophysics Data System (ADS)

Green, Paul D.; Fox, Nigel P.; Lobb, Daniel; Friend, Jonathan

2015-10-01

TRUTHS (Traceable Radiometry Underpinning Terrestrial- and Helio-Studies) is a proposed small satellite mission to enable a space-based climate observing system capable of delivering data of the quality needed to provide the information needed by policy makers to make robust mitigation and adaptation decisions. This is achieved by embedding trust and confidence in the data and derived information (tied to international standards) from both its own measurements and by upgrading the performance and interoperability of other EO platforms, such as the Sentinels by in-flight reference calibration. TRUTHS would provide measurements of incoming (total and spectrally resolved) and global reflected spectrally and spatially (50 m) solar radiation at the 0.3% uncertainty level. These fundamental climate data products can be convolved into the building blocks for many ECVs and EO applications as envisaged by the 2015 ESA science strategy; in a cost effective manner. We describe the scientific drivers for the TRUTHS mission and how the requirements for the climate benchmarking and cross-calibration reference sensor are both complementary and simply implemented, with a small additional complexity on top of heritage calibration schemes. The calibration scheme components and the route to SI-traceable Earth-reflected solar spectral radiance and solar spectral irradiance are described.

Lunar phase function at 1064 nm from Lunar Orbiter Laser Altimeter passive and active radiometry

NASA Astrophysics Data System (ADS)

Barker, M. K.; Sun, X.; Mazarico, E.; Neumann, G. A.; Zuber, M. T.; Smith, D. E.

2016-07-01

We present initial calibration and results of passive radiometry collected by the Lunar Orbiter Laser Altimeter onboard the Lunar Reconnaissance Orbiter over the course of 12 months. After correcting for time- and temperature-dependent dark noise and detector responsivity variations, the LOLA passive radiometry measurements are brought onto the absolute radiance scale of the SELENE Spectral Profiler. The resulting photometric precision is estimated to be ∼5%. We leverage the unique ability of LOLA to measure normal albedo to explore the 1064 nm phase function's dependence on various geologic parameters. On a global scale, we find that iron abundance and optical maturity (quantified by FeO and OMAT) are the dominant controlling parameters. Titanium abundance (TiO2), surface roughness on decimeter to decameter scales, and soil thermophysical properties have a smaller effect, but the latter two are correlated with OMAT, indicating that exposure age is the driving force behind their effects in a globally-averaged sense. The phase function also exhibits a dependence on surface slope at ∼300 m baselines, possibly the result of mass wasting exposing immature material and/or less space weathering due to reduced sky visibility. Modeling the photometric function in the Hapke framework, we find that, relative to the highlands, the maria exhibit decreased backscattering, a smaller opposition effect (OE) width, and a smaller OE amplitude. Immature highlands regolith has a higher backscattering fraction and a larger OE width compared to mature highlands regolith. Within the maria, the backscattering fraction and OE width show little dependence on TiO2 and OMAT. Variations in the phase function shape at large phase angles are observed in and around the Copernican-aged Jackson crater, including its dark halo, a putative impact melt deposit. Finally, the phase function of the Reiner Gamma Formation behaves more optically immature than is typical for its composition and OMAT

Lunar Phase Function at 1064 Nm from Lunar Orbiter Laser Altimeter Passive and Active Radiometry

NASA Technical Reports Server (NTRS)

Barker, M. K.; Sun, X.; Mazarico, E.; Neumann, G. A.; Zuber, M. T.; Smith, D. E.

2016-01-01

We present initial calibration and results of passive radiometry collected by the Lunar Orbiter Laser Al- timeter onboard the Lunar Reconnaissance Orbiter over the course of 12 months. After correcting for time- and temperature-dependent dark noise and detector responsivity variations, the LOLA passive radiometry measurements are brought onto the absolute radiance scale of the SELENE Spectral Profiler. The resulting photometric precision is estimated to be approximately 5%. We leverage the unique ability of LOLA to measure normal albedo to explore the 1064 nm phase function's dependence on various geologic parameters. On a global scale, we find that iron abundance and optical maturity (quantified by FeO and OMAT) are the dominant controlling parameters. Titanium abundance (TiO2 ), surface roughness on decimeter to decameter scales, and soil thermophysical properties have a smaller effect, but the latter two are correlated with OMAT, indicating that exposure age is the driving force behind their effects in a globally-averaged sense. The phase function also exhibits a dependence on surface slope at approximately 300 m baselines, possibly the result of mass wasting exposing immature material and/or less space weathering due to reduced sky visibility. Modeling the photometric function in the Hapke framework, we find that, relative to the highlands, the maria exhibit decreased backscattering, a smaller opposition effect (OE) width, and a smaller OE amplitude. Immature highlands regolith has a higher backscattering fraction and a larger OE width compared to mature highlands regolith. Within the maria, the backscattering fraction and OE width show little dependence on TiO2 and OMAT. Variations in the phase function shape at large phase angles are observed in and around the Copernican-aged Jackson crater, including its dark halo, a putative impact melt deposit. Finally, the phase function of the Reiner Gamma Formation behaves more optically immature than is typical for its

The Effect of Underwater Imagery Radiometry on 3d Reconstruction and Orthoimagery

NASA Astrophysics Data System (ADS)

Agrafiotis, P.; Drakonakis, G. I.; Georgopoulos, A.; Skarlatos, D.

2017-02-01

The work presented in this paper investigates the effect of the radiometry of the underwater imagery on automating the 3D reconstruction and the produced orthoimagery. Main aim is to investigate whether pre-processing of the underwater imagery improves the 3D reconstruction using automated SfM - MVS software or not. Since the processing of images either separately or in batch is a time-consuming procedure, it is critical to determine the necessity of implementing colour correction and enhancement before the SfM - MVS procedure or directly to the final orthoimage when the orthoimagery is the deliverable. Two different test sites were used to capture imagery ensuring different environmental conditions, depth and complexity. Three different image correction methods are applied: A very simple automated method using Adobe Photoshop, a developed colour correction algorithm using the CLAHE (Zuiderveld, 1994) method and an implementation of the algorithm described in Bianco et al., (2015). The produced point clouds using the initial and the corrected imagery are then being compared and evaluated.

Study of the heat transfer in solids using infrared photothermal radiometry and simulation by COMSOL Multiphysics.

PubMed

Suarez, V; Hernández Wong, J; Nogal, U; Calderón, A; Rojas-Trigos, J B; Juárez, A G; Marín, E

2014-01-01

It is reported the study of the heat transfer through a homogeneous and isotropic solid exited by square periodic light beam on its front surface. For this, we use the Infrared Photothermal Radiometry in order to obtain the evolution of the temperature difference on the rear surface of three samples, silicon, copper and wood, as a function of the exposure time. Also, we solved the heat transport equation for this problem with the boundary conditions congruent with the physical situation, by means of numerical simulation based in finite element analysis. Our results show a good agreement between the experimental and numerical simulated results, which demonstrate the utility of this methodology for the study of the thermal response of solids. Copyright © 2013 Elsevier Ltd. All rights reserved.

Optothermal transient emission radiometry for studying the changes in epidermal hydration induced during ripening of tomato fruit mutants

NASA Astrophysics Data System (ADS)

Guo, X.; Bicanic, D.; Imhof, R.; Xiao, P.; Harbinson, J.

2004-10-01

Optothermal transient emission radiometry (OTTER) was used to determine the mean surface hydration and the hydration profile of three mutants (beefsteak, slicing and salad) of harvested tomatoes (Lycopersicon esculentum) that were kept under ambient conditions for as long as 51 days. Maximal sensitivity of OTTER to water in the samples was achieved by using 2.94 μm and 13.1 μm as excitation and emission wavelengths, respectively. The surface hydration increases rapidly and reaches a constant level during the remaining period. The hydrolysis of pectic substances that occur in tomatoes while ripening might be a possible cause for the observed change in hydration.

Empirical STORM-E Model. [I. Theoretical and Observational Basis

NASA Technical Reports Server (NTRS)

Mertens, Christopher J.; Xu, Xiaojing; Bilitza, Dieter; Mlynczak, Martin G.; Russell, James M., III

2013-01-01

Auroral nighttime infrared emission observed by the Sounding of the Atmosphere using Broadband Emission Radiometry (SABER) instrument onboard the Thermosphere-Ionosphere-Mesosphere Energetics and Dynamics (TIMED) satellite is used to develop an empirical model of geomagnetic storm enhancements to E-region peak electron densities. The empirical model is called STORM-E and will be incorporated into the 2012 release of the International Reference Ionosphere (IRI). The proxy for characterizing the E-region response to geomagnetic forcing is NO+(v) volume emission rates (VER) derived from the TIMED/SABER 4.3 lm channel limb radiance measurements. The storm-time response of the NO+(v) 4.3 lm VER is sensitive to auroral particle precipitation. A statistical database of storm-time to climatological quiet-time ratios of SABER-observed NO+(v) 4.3 lm VER are fit to widely available geomagnetic indices using the theoretical framework of linear impulse-response theory. The STORM-E model provides a dynamic storm-time correction factor to adjust a known quiescent E-region electron density peak concentration for geomagnetic enhancements due to auroral particle precipitation. Part II of this series describes the explicit development of the empirical storm-time correction factor for E-region peak electron densities, and shows comparisons of E-region electron densities between STORM-E predictions and incoherent scatter radar measurements. In this paper, Part I of the series, the efficacy of using SABER-derived NO+(v) VER as a proxy for the E-region response to solar-geomagnetic disturbances is presented. Furthermore, a detailed description of the algorithms and methodologies used to derive NO+(v) VER from SABER 4.3 lm limb emission measurements is given. Finally, an assessment of key uncertainties in retrieving NO+(v) VER is presented

Traceable Radiometry Underpinning Terrestrial - and Helio- Studies (TRUTHS)

USGS Publications Warehouse

Fox, N.; Aiken, J.; Barnett, J.J.; Briottet, X.; Carvell, R.; Frohlich, C.; Groom, S.B.; Hagolle, O.; Haigh, J.D.; Kieffer, H.H.; Lean, J.; Pollock, D.B.; Quinn, T.; Sandford, M.C.W.; Schaepman, M.; Shine, K.P.; Schmutz, W.K.; Teillet, P.M.; Thome, K.J.; Verstraete, M.M.; Zalewski, E.

2003-01-01

The Traceable Radiometry Underpinning Terrestrial- and Helio- Studies (TRUTHS) mission offers a novel approach to the provision of key scientific data with unprecedented radiometric accuracy for Earth Observation (EO) and solar studies, which will also establish well-calibrated reference targets/standards to support other EO missions. This paper presents the TRUTHS mission and its objectives. TRUTHS will be the first satellite mission to calibrate its EO instrumentation directly to SI in orbit, overcoming the usual uncertainties associated with drifts of sensor gain and spectral shape by using an electrical rather than an optical standard as the basis of its calibration. The range of instruments flown as part of the payload will also provide accurate input data to improve atmospheric radiative transfer codes by anchoring boundary conditions, through simultaneous measurements of aerosols, particulates and radiances at various heights. Therefore, TRUTHS will significantly improve the performance and accuracy of EO missions with broad global or operational aims, as well as more dedicated missions. The provision of reference standards will also improve synergy between missions by reducing errors due to different calibration biases and offer cost reductions for future missions by reducing the demands for on-board calibration systems. Such improvements are important for the future success of strategies such as Global Monitoring for Environment and Security (GMES) and the implementation and monitoring of international treaties such as the Kyoto Protocol. TRUTHS will achieve these aims by measuring the geophysical variables of solar and lunar irradiance, together with both polarised and unpolarised spectral radiance of the Moon, Earth and its atmosphere. Published by Elsevier Ltd of behalf of COSPAR.

Accurate Radiometry from Space: An Essential Tool for Climate Studies

NASA Technical Reports Server (NTRS)

Fox, Nigel; Kaiser-Weiss, Andrea; Schmutz, Werner; Thome, Kurtis; Young, Dave; Wielicki, Bruce; Winkler, Rainer; Woolliams, Emma

2011-01-01

The Earth s climate is undoubtedly changing; however, the time scale, consequences and causal attribution remain the subject of significant debate and uncertainty. Detection of subtle indicators from a background of natural variability requires measurements over a time base of decades. This places severe demands on the instrumentation used, requiring measurements of sufficient accuracy and sensitivity that can allow reliable judgements to be made decades apart. The International System of Units (SI) and the network of National Metrology Institutes were developed to address such requirements. However, ensuring and maintaining SI traceability of sufficient accuracy in instruments orbiting the Earth presents a significant new challenge to the metrology community. This paper highlights some key measurands and applications driving the uncertainty demand of the climate community in the solar reflective domain, e.g. solar irradiances and reflectances/radiances of the Earth. It discusses how meeting these uncertainties facilitate significant improvement in the forecasting abilities of climate models. After discussing the current state of the art, it describes a new satellite mission, called TRUTHS, which enables, for the first time, high-accuracy SI traceability to be established in orbit. The direct use of a primary standard and replication of the terrestrial traceability chain extends the SI into space, in effect realizing a metrology laboratory in space . Keywords: climate change; Earth observation; satellites; radiometry; solar irradiance

An absolute calibration method of an ethyl alcohol biosensor based on wavelength-modulated differential photothermal radiometry

NASA Astrophysics Data System (ADS)

Liu, Yi Jun; Mandelis, Andreas; Guo, Xinxin

2015-11-01

In this work, laser-based wavelength-modulated differential photothermal radiometry (WM-DPTR) is applied to develop a non-invasive in-vehicle alcohol biosensor. WM-DPTR features unprecedented ethanol-specificity and sensitivity by suppressing baseline variations through a differential measurement near the peak and baseline of the mid-infrared ethanol absorption spectrum. Biosensor signal calibration curves are obtained from WM-DPTR theory and from measurements in human blood serum and ethanol solutions diffused from skin. The results demonstrate that the WM-DPTR-based calibrated alcohol biosensor can achieve high precision and accuracy for the ethanol concentration range of 0-100 mg/dl. The high-performance alcohol biosensor can be incorporated into ignition interlocks that could be fitted as a universal accessory in vehicles in an effort to reduce incidents of drinking and driving.

Detection of Dental Secondary Caries Using Frequency-Domain Infrared Photothermal Radiometry (PTR) and Modulated Luminescence (LUM)

NASA Astrophysics Data System (ADS)

Kim, J.; Mandelis, A.; Matvienko, A.; Abrams, S.; Amaechi, B. T.

2012-11-01

The ability of frequency-domain photothermal radiometry (PTR) and modulated luminescence (LUM) to detect secondary caries is presented. Signal behavior upon sequential demineralization and remineralization of a spot (diameter ~1 mm) on a vertical wall of sectioned tooth samples was investigated experimentally. From these studies, it was found that PTR-LUM signals change, showing a certain pattern upon progressive demineralization and remineralization. PTR amplitudes slightly decreased upon progressive demineralization and slightly increased upon subsequent remineralization. The PTR phase increased during both demineralization and remineralization. LUM amplitudes exhibit a decreasing trend at excitation/probe distances larger than 200 μm away from the edge for both demineralization and remineralization; however, at locations close to the edge (up to ~200 μm), LUM signals slightly decrease upon demineralization and slightly increase during subsequent remineralization.

An absolute calibration method of an ethyl alcohol biosensor based on wavelength-modulated differential photothermal radiometry.

PubMed

Liu, Yi Jun; Mandelis, Andreas; Guo, Xinxin

2015-11-01

In this work, laser-based wavelength-modulated differential photothermal radiometry (WM-DPTR) is applied to develop a non-invasive in-vehicle alcohol biosensor. WM-DPTR features unprecedented ethanol-specificity and sensitivity by suppressing baseline variations through a differential measurement near the peak and baseline of the mid-infrared ethanol absorption spectrum. Biosensor signal calibration curves are obtained from WM-DPTR theory and from measurements in human blood serum and ethanol solutions diffused from skin. The results demonstrate that the WM-DPTR-based calibrated alcohol biosensor can achieve high precision and accuracy for the ethanol concentration range of 0-100 mg/dl. The high-performance alcohol biosensor can be incorporated into ignition interlocks that could be fitted as a universal accessory in vehicles in an effort to reduce incidents of drinking and driving.

Chapter 4: Teachers' and Administrators' Perceptions of the Saber-Tooth Project Reform and of Their Changing Workplace Conditions.

ERIC Educational Resources Information Center

Doutis, Panayiotis; Ward, Phillip

1999-01-01

Describes changing workplace conditions encountered by middle school physical education teachers and administrators engaged in the Saber-Tooth Project, sharing data from interviews about their perspectives of this project. Findings are organized around the themes of collegiality, planning and assessment, and professionalism, all of which empowered…

Investigation of Thermal Properties of High-Density Polyethylene/Aluminum Nanocomposites by Photothermal Infrared Radiometry

NASA Astrophysics Data System (ADS)

Koca, H. D.; Evgin, T.; Horny, N.; Chirtoc, M.; Turgut, A.; Tavman, I. H.

2017-12-01

In this study, thermal properties of high-density polyethylene (HDPE) filled with nanosized Al particles (80 nm) were investigated. Samples were prepared using melt mixing method up to filler volume fraction of 29 %, followed by compression molding. By using modulated photothermal radiometry (PTR) technique, thermal diffusivity and thermal effusivity were obtained. The effective thermal conductivity of nanocomposites was calculated directly from PTR measurements and from the measurements of density, specific heat capacity (by differential scanning calorimetry) and thermal diffusivity (obtained from PTR signal amplitude and phase). It is concluded that the thermal conductivity of HDPE composites increases with increasing Al fraction and the highest effective thermal conductivity enhancement of 205 % is achieved at a filler volume fraction of 29 %. The obtained results were compared with the theoretical models and experimental data given in the literature. The results demonstrate that Agari and Uno, and Cheng and Vachon models can predict well the thermal conductivity of HDPE/Al nanocomposites in the whole range of Al fractions.

A Bottom-Up Engineered Broadband Optical Nanoabsorber for Radiometry and Energy Harnessing Applications

NASA Technical Reports Server (NTRS)

Kaul, Anupama B.; Coles, James B.; Megerian, Krikor G.; Eastwood, Michael; Green, Robert O.; Bandaru, Prabhakar R.

2013-01-01

Optical absorbers based on vertically aligned multi-walled carbon nanotubes (MWCNTs), synthesized using electric-field assisted growth, are described here that show an ultra-low reflectance, 100X lower compared to Au-black from wavelength lamba approximately 350 nm - 2.5 micron. A bi-metallic Co/Ti layer was shown to catalyze a high site density of MWCNTs on metallic substrates and the optical properties of the absorbers were engineered by controlling the bottom-up synthesis conditions using dc plasma-enhanced chemical vapor deposition (PECVD). Reflectance measurements on the MWCNT absorbers after heating them in air to 400deg showed negligible changes in reflectance which was still low, approximately 0.022 % at lamba approximately 2 micron. In contrast, the percolated structure of the reference Au-black samples collapsed completely after heating, causing the optical response to degrade at temperatures as low as 200deg. The high optical absorption efficiency of the MWCNT absorbers, synthesized on metallic substrates, over a broad spectral range, coupled with their thermal ruggedness, suggests they have promise in solar energy harnessing applications, as well as thermal detectors for radiometry.

Melanoma thickness measurement in two-layer tissue phantoms using pulsed photothermal radiometry (PPTR)

NASA Astrophysics Data System (ADS)

Wang, Tianyi; Qiu, Jinze; Paranjape, Amit; Milner, Thomas E.

2009-02-01

Melanoma is a malignant tumor of melanocytes which are found predominantly in skin. Melanoma is one of the rarer types of skin cancer but causes the majority of skin cancer related deaths. The staging of malignant melanoma using Breslow thickness is important because of the relationship to survival rate after five years. Pulsed photothermal radiometry (PPTR) is based on the time-resolved acquisition of infrared (IR) emission from a sample after pulsed laser exposure. PPTR can be used to investigate the relationship between melanoma thickness and detected radiometric temperature using two-layer tissue phantoms. We used a Monte Carlo simulation to mimic light transport in melanoma and employed a three-dimensional heat transfer model to obtain simulated radiometric temperature increase and, in comparison, we also conducted PPTR experiments to confirm our simulation results. Simulation and experimental results show similar trends: thicker absorbing layers corresponding to deeper lesions produce slower radiometric temperature decays. A quantitative relationship exists between PPTR radiometric temperature decay time and thickness of the absorbing layer in tissue phantoms.

Development of a Geomagnetic Storm Correction to the International Reference Ionosphere E-Region Electron Densities Using TIMED/SABER Observations

NASA Technical Reports Server (NTRS)

Mertens, C. J.; Xu, X.; Fernandez, J. R.; Bilitza, D.; Russell, J. M., III; Mlynczak, M. G.

2009-01-01

Auroral infrared emission observed from the TIMED/SABER broadband 4.3 micron channel is used to develop an empirical geomagnetic storm correction to the International Reference Ionosphere (IRI) E-region electron densities. The observation-based proxy used to develop the storm model is SABER-derived NO+(v) 4.3 micron volume emission rates (VER). A correction factor is defined as the ratio of storm-time NO+(v) 4.3 micron VER to a quiet-time climatological averaged NO+(v) 4.3 micron VER, which is linearly fit to available geomagnetic activity indices. The initial version of the E-region storm model, called STORM-E, is most applicable within the auroral oval region. The STORM-E predictions of E-region electron densities are compared to incoherent scatter radar electron density measurements during the Halloween 2003 storm events. Future STORM-E updates will extend the model outside the auroral oval.

Inter-Hemispheric Coupling During Northern Polar Summer Periods of 2002-2010 using TIMED/SABER Measurements

NASA Technical Reports Server (NTRS)

Goldberg, Richard A.; Feofilov, A. G.; Pesnell, W. D.; Kutepov, A. A.

2012-01-01

It has been found that for more than one polar summer season between 2002-2010, the northern polar mesospheric region near and above about 80 km was warmer than normal. The strongest warming effect of this type was observed to occur during northern summer 2002. Theoretical studies have implied that these "anomalies" were preceded by unusual dynamical processes in the southern hemisphere. We have analyzed temperature distributions measured by the SABER limb scanning infrared radiometer aboard the NASA TIMED satellite between 2002-2010 at altitudes from 15 to 110 km and for latitudes between 83 S to 83 N. We describe the approach to trace the inter-hemispheric temperature correlations demonstrating the global features that were unique for the "anomalous" northern polar summers. From our analysis of SABER data from 2002-2010, the anomalous heating for the northern mesopause region during northern summer was accompanied by stratospheric heating in the equatorial region. In the winter hemisphere it is accompanied by heating in the lower stratosphere and mesopause region, and cooling in the stratopause region. Also, all the elements of the temperature anomaly structure appear to develop and fade away nearly simultaneously, thereby suggesting either a global influence or a rapid exchange.

Capturing a failure of an ASIC in-situ, using infrared radiometry and image processing software

NASA Technical Reports Server (NTRS)

Ruiz, Ronald P.

2003-01-01

Failures in electronic devices can sometimes be tricky to locate-especially if they are buried inside radiation-shielded containers designed to work in outer space. Such was the case with a malfunctioning ASIC (Application Specific Integrated Circuit) that was drawing excessive power at a specific temperature during temperature cycle testing. To analyze the failure, infrared radiometry (thermography) was used in combination with image processing software to locate precisely where the power was being dissipated at the moment the failure took place. The IR imaging software was used to make the image of the target and background, appear as unity. As testing proceeded and the failure mode was reached, temperature changes revealed the precise location of the fault. The results gave the design engineers the information they needed to fix the problem. This paper describes the techniques and equipment used to accomplish this failure analysis.

Investigations of the possibility of determination of thermal parameters of Si and SiGe samples based on the Photo Thermal Radiometry technique

NASA Astrophysics Data System (ADS)

Chrobak, Ł.; Maliński, M.

2018-03-01

This paper presents results of investigations of the possibility of determination of thermal parameters (thermal conductivity, thermal diffusivity) of silicon and silicon germanium crystals from the frequency characteristics of the Photo Thermal Radiometry (PTR) signal. The theoretical analysis of the influence of the mentioned parameters on the PTR signal has been presented and discussed. The values of the thermal and recombination parameters have been extracted from the fittings of the theoretical to experimental data. The presented approach uses the reference Si sample whose thermal and recombination parameters are known.

An absolute calibration method of an ethyl alcohol biosensor based on wavelength-modulated differential photothermal radiometry

DOE Office of Scientific and Technical Information (OSTI.GOV)

Liu, Yi Jun; Mandelis, Andreas, E-mail: mandelis@mie.utoronto.ca; Institute of Biomaterials and Biomedical Engineering, University of Toronto, Toronto, Ontario M5S 3G9

In this work, laser-based wavelength-modulated differential photothermal radiometry (WM-DPTR) is applied to develop a non-invasive in-vehicle alcohol biosensor. WM-DPTR features unprecedented ethanol-specificity and sensitivity by suppressing baseline variations through a differential measurement near the peak and baseline of the mid-infrared ethanol absorption spectrum. Biosensor signal calibration curves are obtained from WM-DPTR theory and from measurements in human blood serum and ethanol solutions diffused from skin. The results demonstrate that the WM-DPTR-based calibrated alcohol biosensor can achieve high precision and accuracy for the ethanol concentration range of 0-100 mg/dl. The high-performance alcohol biosensor can be incorporated into ignition interlocks that couldmore » be fitted as a universal accessory in vehicles in an effort to reduce incidents of drinking and driving.« less

RFI Risk Reduction Activities Using New Goddard Digital Radiometry Capabilities

NASA Technical Reports Server (NTRS)

Bradley, Damon; Kim, Ed; Young, Peter; Miles, Lynn; Wong, Mark; Morris, Joel

2012-01-01

The Goddard Radio-Frequency Explorer (GREX) is the latest fast-sampling radiometer digital back-end processor that will be used for radiometry and radio-frequency interference (RFI) surveying at Goddard Space Flight Center. The system is compact and deployable, with a mass of about 40 kilograms. It is intended to be flown on aircraft. GREX is compatible with almost any aircraft, including P-3, twin otter, C-23, C-130, G3, and G5 types. At a minimum, the system can function as a clone of the Soil Moisture Active Passive (SMAP) ground-based development unit [1], or can be a completely independent system that is interfaced to any radiometer, provided that frequency shifting to GREX's intermediate frequency is performed prior to sampling. If the radiometer RF is less than 200MHz, then the band can be sampled and acquired directly by the system. A key feature of GREX is its ability to simultaneously sample two polarization channels simultaneously at up to 400MSPS, 14-bit resolution each. The sampled signals can be recorded continuously to a 23 TB solid-state RAID storage array. Data captures can be analyzed offline using the supercomputing facilities at Goddard Space Flight Center. In addition, various Field Programmable Gate Array (FPGA) - amenable radiometer signal processing and RFI detection algorithms can be implemented directly on the GREX system because it includes a high-capacity Xilinx Virtex-5 FPGA prototyping system that is user customizable.

Estimation of biomedical optical properties by simultaneous use of diffuse reflectometry and photothermal radiometry: investigation of light propagation models

NASA Astrophysics Data System (ADS)

Fonseca, E. S. R.; de Jesus, M. E. P.

2007-07-01

The estimation of optical properties of highly turbid and opaque biological tissue is a difficult task since conventional purely optical methods rapidly loose sensitivity as the mean photon path length decreases. Photothermal methods, such as pulsed or frequency domain photothermal radiometry (FD-PTR), on the other hand, show remarkable sensitivity in experimental conditions that produce very feeble optical signals. Photothermal Radiometry is primarily sensitive to absorption coefficient yielding considerably higher estimation errors on scattering coefficients. Conversely, purely optical methods such as Local Diffuse Reflectance (LDR) depend mainly on the scattering coefficient and yield much better estimates of this parameter. Therefore, at moderate transport albedos, the combination of photothermal and reflectance methods can improve considerably the sensitivity of detection of tissue optical properties. The authors have recently proposed a novel method that combines FD-PTR with LDR, aimed at improving sensitivity on the determination of both optical properties. Signal analysis was performed by global fitting the experimental data to forward models based on Monte-Carlo simulations. Although this approach is accurate, the associated computational burden often limits its use as a forward model. Therefore, the application of analytical models based on the diffusion approximation offers a faster alternative. In this work, we propose the calculation of the diffuse reflectance and the fluence rate profiles under the δ-P I approximation. This approach is known to approximate fluence rate expressions better close to collimated sources and boundaries than the standard diffusion approximation (SDA). We extend this study to the calculation of the diffuse reflectance profiles. The ability of the δ-P I based model to provide good estimates of the absorption, scattering and anisotropy coefficients is tested against Monte-Carlo simulations over a wide range of scattering to

Saber y conocer: Un plan para su ensenaza (To know and to be acquainted with: A teaching plan).

ERIC Educational Resources Information Center

Lizardi-Rivera, Carmen M.

1995-01-01

Focuses on how to teach English-speaking students of Spanish the practical distinction between the verbs, "saber" (to be cognizant of) and "conocer" (to be acquainted with). This article describes a solution proposed by K. Taylor for explaining the limits of the two verbs and examines similar proposals delineated in three other Spanish textbooks.…

Silver halide fiber optic radiometry for temperature monitoring and control of tissues heated by microwave

NASA Astrophysics Data System (ADS)

Shenfeld, Ofer; Belotserkovsky, Edward; Goldwasser, Benad; Zur, Albert; Katzir, Abraham

1993-02-01

The heating of tissue by microwave radiation has attained a place of importance in various medical fields, such as the treatment of malignancies, urinary retention, and hypothermia. Accurate temperature measurements in these treated tissues is important for treatment planning and for the control of the heating process. It is also important to be able to measure spacial temperature distribution in the tissues because they are heated in a nonuniform way by the microwave radiation. Conventional temperature sensors used today are inaccurate in the presence of microwave radiation and require contact with the heated tissue. Fiber optic radiometry makes it possible to measure temperatures accurately in the presence of microwave radiation and does not require contact with the tissue. Accurate temperature measurements of tissues heated by microwave was obtained using a silver halide optic radiometer, enabling control of the heating process in other regions of the tissue samples. Temperature mappings of the heated tissues were performed and the nonuniform temperature distributions in these tissues was demonstrated.

AIS-2 radiometry and a comparison of methods for the recovery of ground reflectance

NASA Technical Reports Server (NTRS)

Conel, James E.; Green, Robert O.; Vane, Gregg; Bruegge, Carol J.; Alley, Ronald E.; Curtiss, Brian J.

1987-01-01

A field experiment and its results involving Airborne Imaging Spectrometer-2 data are described. The radiometry and spectral calibration of the instrument are critically examined in light of laboratory and field measurements. Three methods of compensating for the atmosphere in the search for ground reflectance are compared. It was found that laboratory determined responsitivities are 30 to 50 percent less than expected for conditions of the flight for both short and long wavelength observations. The combined system atmosphere surface signal to noise ratio, as indexed by the mean response divided by the standard deviation for selected areas, lies between 40 and 110, depending upon how scene averages are taken, and is 30 percent less for flight conditions than for laboratory. Atmospheric and surface variations may contribute to this difference. It is not possible to isolate instrument performance from the present data. As for methods of data reduction, the so-called scene average or log-residual method fails to recover any feature present in the surface reflectance, probably because of the extreme homogeneity of the scene.

Sensor-independent approach to the vicarious calibration of satellite ocean color radiometry.

PubMed

Franz, Bryan A; Bailey, Sean W; Werdell, P Jeremy; McClain, Charles R

2007-08-01

The retrieval of ocean color radiometry from space-based sensors requires on-orbit vicarious calibration to achieve the level of accuracy desired for quantitative oceanographic applications. The approach developed by the NASA Ocean Biology Processing Group (OBPG) adjusts the integrated instrument and atmospheric correction system to retrieve normalized water-leaving radiances that are in agreement with ground truth measurements. The method is independent of the satellite sensor or the source of the ground truth data, but it is specific to the atmospheric correction algorithm. The OBPG vicarious calibration approach is described in detail, and results are presented for the operational calibration of SeaWiFS using data from the Marine Optical Buoy (MOBY) and observations of clear-water sites in the South Pacific and southern Indian Ocean. It is shown that the vicarious calibration allows SeaWiFS to reproduce the MOBY radiances and achieve good agreement with radiometric and chlorophyll a measurements from independent in situ sources. We also find that the derived vicarious gains show no significant temporal or geometric dependencies, and that the mission-average calibration reaches stability after approximately 20-40 high-quality calibration samples. Finally, we demonstrate that the performance of the vicariously calibrated retrieval system is relatively insensitive to the assumptions inherent in our approach.

Novel monitoring of corneal surface hydration during photorefractive keratectomy using pulsed photothermal radiometry: in-vitro study

NASA Astrophysics Data System (ADS)

Kawauchi, Satoko; Matsuyama, Hiroko; Obara, Minoru; Ishihara, Miya; Arai, Tsunenori; Kikuchi, Makoto; Katoh, Masayoshi

1997-05-01

We developed novel monitoring methodology for corneal surface hydration during photorefractive keratectomy (PRK) in order to solve undercorrection issue at the central part of cornea (Central island). We employed pulsed photothermal radiometry to monitor corneal surface hydration. We performed two experiments; gelatin gel experiments and porcine cornea experiments in vitro. In the case of the gelatin gel experiments, the e-folding decay time of transient infrared radiation waveform from the ArF laser irradiated surface was prolonged from 420 microsecond(s) to 30 ms with decreasing gelatin density from 15% to 0.15%. These measured e-folding decay times were good agreements with theoretical calculations. Using porcine cornea, we observed the e-folding decay time increase during the series of ArF excimer laser irradiations. Our method may be available to know ablation efficiency change to improve the controllability of refractive correction on the PRK.

Multi-instrument gravity-wave measurements over Tierra del Fuego and the Drake Passage - Part 1: Potential energies and vertical wavelengths from AIRS, COSMIC, HIRDLS, MLS-Aura, SAAMER, SABER and radiosondes

NASA Astrophysics Data System (ADS)

Wright, Corwin J.; Hindley, Neil P.; Moss, Andrew C.; Mitchell, Nicholas J.

2016-03-01

Gravity waves in the terrestrial atmosphere are a vital geophysical process, acting to transport energy and momentum on a wide range of scales and to couple the various atmospheric layers. Despite the importance of these waves, the many studies to date have often exhibited very dissimilar results, and it remains unclear whether these differences are primarily instrumental or methodological. Here, we address this problem by comparing observations made by a diverse range of the most widely used gravity-wave-resolving instruments in a common geographic region around the southern Andes and Drake Passage, an area known to exhibit strong wave activity. Specifically, we use data from three limb-sounding radiometers (Microwave Limb Sounder, MLS-Aura; HIgh Resolution Dynamics Limb Sounder, HIRDLS; Sounding of the Atmosphere using Broadband Emission Radiometry, SABER), the Constellation Observing System for Meteorology, Ionosphere and Climate (COSMIC) GPS-RO constellation, a ground-based meteor radar, the Advanced Infrared Sounder (AIRS) infrared nadir sounder and radiosondes to examine the gravity wave potential energy (GWPE) and vertical wavelengths (λz) of individual gravity-wave packets from the lower troposphere to the edge of the lower thermosphere ( ˜ 100 km). Our results show important similarities and differences. Limb sounder measurements show high intercorrelation, typically > 0.80 between any instrument pair. Meteor radar observations agree in form with the limb sounders, despite vast technical differences. AIRS and radiosonde observations tend to be uncorrelated or anticorrelated with the other data sets, suggesting very different behaviour of the wave field in the different spectral regimes accessed by each instrument. Evidence of wave dissipation is seen, and varies strongly with season. Observed GWPE for individual wave packets exhibits a log-normal distribution, with short-timescale intermittency dominating over a well-repeated monthly-median seasonal

Non-mechanical optical path switching and its application to dual beam spectroscopy including gas filter correlation radiometry

NASA Technical Reports Server (NTRS)

Sachse, Glen W. (Inventor); Wang, Liang-Guo (Inventor)

1992-01-01

A non-mechanical optical switch is developed for alternately switching a monochromatic or quasi-monochromatic light beam along two optical paths. A polarizer polarizes light into a single, e.g., vertical component which is then rapidly modulated into vertical and horizontal components by a polarization modulator. A polarization beam splitter then reflects one of these components along one path and transmits the other along the second path. In the specific application of gas filter correlation radiometry, one path is directed through a vacuum cell and one path is directed through a gas correlation cell containing a desired gas. Reflecting mirrors cause these two paths to intersect at a second polarization beam splitter which reflects one component and transmits the other to recombine them into a polarization modulated beam which can be detected by an appropriate single sensor.

The European saber-toothed cat (Homotherium latidens) found in the "Spear Horizon" at Schöningen (Germany).

PubMed

Serangeli, Jordi; Van Kolfschoten, Thijs; Starkovich, Britt M; Verheijen, Ivo

2015-12-01

The 300,000 year old Lower Paleolithic site Schöningen 13 II-4 became world famous with the discovery of the oldest well-preserved and complete wooden spears. Through ongoing excavations, new archaeological discoveries of scientific importance are still being made from the same archaeological layer where the spears were found. In this context, remains of a rare carnivore species, the European saber-toothed cat (Homotherium latidens), were recovered. Here we present five teeth and one humerus fragment that are unambiguously from two individual saber-toothed cats. The humerus is a unique specimen; it shows evidence of hominin impacts and use as a percussor. The Homotherium remains from Schöningen are the best documented finds of this species in an archaeological setting and they are amongst the youngest specimens of Homotherium in Europe. The presence of this species as a carnivore competitor would certainly have impacted the lives of late Middle Pleistocene hominins. The discovery illustrates the possible day-to-day challenges that the Schöningen hominins would have faced and suggests that the wooden spears were not necessarily only used for hunting, but possibly also as a weapon for self-defense. Copyright © 2015 Elsevier Ltd. All rights reserved.

Storm-time variation of radiative cooling by Nitric Oxide as observed by TIMED-SABER and GUVI

NASA Astrophysics Data System (ADS)

Sunil Krishna, M. V.; Bharti, G.; Bag, T.

2017-12-01

The variation of O/N2 and nitric oxide radiative emission flux exiting thermosphere have been studied over northern hemisphere during the super-storm event of November 7-12, 2004. The data have been obtained from GUVI and SABER onboard the NASA's TIMED satellite. The NO radiative flux is observed to show an anti-correlation with O/N2 on a global scale. Both NO radiative flux and O/N2 ratio show equatorward motion with maximum penetration in western longitude sectors. A local variation of O, O2 and N2 densities have been calculated by using NRLMSISE-00 model over a mid-latitude location (55oN,180oE). On a local scale, model calculated O/O2 and O/N2 ratios are found to follow the observations made by GUVI. The SABER retrieved NO cooling rate (CR) at a local site suggests an enhancement during the storm period with the peak emission rate closely correlated to the progression of the storm. The peak emission altitude of NO CR moves upward during the main phase of the storm. The NO abundance has been calculated by using cooling rate and NOEM model. Both these suggest huge increase in NO density during the storm which is required to account the changes in NO radiative flux.

Validation of the MIPAS CO2 volume mixing ratio in the mesosphere and lower thermosphere and comparison with WACCM simulations

NASA Astrophysics Data System (ADS)

López-Puertas, Manuel; Funke, B.; Jurado-Navarro, Á. A.; García-Comas, M.; Gardini, A.; Boone, C. D.; Rezac, L.; Garcia, R. R.

2017-08-01

We present the validation of Michelson Interferometer for Passive Atmospheric Sounding (MIPAS) CO2 daytime concentration in the mesosphere and lower thermosphere by comparing with Atmospheric Chemistry Experiment (ACE) Fourier transform spectrometer and Sounding of the Atmosphere using Broadband Emission Radiometry (SABER) data. MIPAS shows a very good agreement with ACE below 100 km with differences of ˜5%. Above 100 km, MIPAS CO2 is generally lower than ACE with differences growing from ˜5% at 100 km to 20-40% near 110-120 km. Part of this disagreement can be explained by the lack of a nonlocal thermodynamic equilibrium correction in ACE. MIPAS also agrees very well (˜5%) with SABER below 100 km. At 90-105 km, MIPAS is generally smaller than SABER by 10-30% in the polar summers. At 100-120 km, MIPAS and SABER CO2 agree within ˜10% during equinox but, for solstice, MIPAS is larger by 10-25%, except near the polar summer. Whole Atmosphere Community Climate Model (WACCM) CO2 shows the major MIPAS features. At 75-100 km, the agreement is very good (˜5%), with maximum differences of ˜10%. At 95-115 km MIPAS CO2 is larger than WACCM by 20-30% in the winter hemisphere but smaller (20-40%) in the summer. Above 95-100 km WACCM generally overestimates MIPAS CO2 by about 20-80% except in the polar summer where underestimates it by 20-40%. MIPAS CO2 favors a large eddy diffusion below 100 km and suggests that the meridional circulation of the lower thermosphere is stronger than in WACCM. The three instruments and WACCM show a clear increase of CO2 with time, more markedly at 90-100 km.

Inter-Hemispheric Coupling During Recent North Polar Summer Periods as Predicted by MaCWAVE/MIDAS Rocket Data and Traced by TIMED/SABER Measurements

NASA Technical Reports Server (NTRS)

Goldberg, Richard A.; Feofilov, Artem G.; Kutepov, Alexander A.; Pesnell W. Dean; Schmidlin, Francis J.

2011-01-01

In July, 2002, the MaCWAVE-MIDAS Rocket Program was launched from Andoya Rocket Range (ARR) in Norway. Data from these flights demonstrated that the polar summer mesosphere during this period was unusual, at least above ARR. Theoretical studies have since been published that imply that the abnormal characteristics of this polar summer were generated by dynamical processes occurring in the southern polar winter hemisphere. We have used data from the SABER instrument aboard the NASA Thermosphere Ionosphere Mesosphere Energetics and Dynamics (TIMED) Satellite to study these characteristics and compare them with the features observed in the ensuing eight years. For background, the TIMED Satellite was launched on December 7,2001 to study the dynamics and energy of the mesosphere and lower thermosphere. The SABER instrument is a limb scanning infrared radiometer designed to measure temperature of the region as well as a large number of minor constituents. In this study, we review the MaCWAVE rocket results. Next, we investigate the temperature characteristics of the polar mesosphere as a function of spatial and temporal considerations. We have used the most recent SABER dataset (1.07). Weekly averages are used to make comparisons between the winter and summer hemispheres. Furthermore, the data analysis agrees with recent theoretical studies showing that this behavior is a result of anomalous dynamical events in the southern hemisphere. The findings discussed here clearly show the value of scientific rocket flights used in a discovery mode.

Inter-Hemispheric Coupling During Recent North Polar Summer Periods as Predicted by MaCWAVE/MIDAS Rocket Data and Traced by TIMED/SABER Measurements

NASA Technical Reports Server (NTRS)

Goldberg, Richard A.; Feofilov, Artem G.; Kutepov, Alexander A.; Pesnell, W. Dean; Schmidlin, Francis J.

2011-01-01

In July, 2002, the MaCWAVE-MIDAS Rocket Program was launched from And0ya Rocket Range (ARR) in Norway. Data from these flights demonstrated that the polar summer mesosphere during this period was unusual, at least above ARR. Theoretical studies have since been published that imply that the abnormal characteristics of this polar summer were generated by dynamical processes occurring in the southern polar winter hemisphere. We have used data from the SABER instrument aboard the NASA TIMED Satellite to study these characteristics and compare them with the features observed in the ensuing eight years. For background, the TIMED Satellite was launched on December 7, 2001 to study the dynamics and energy of the mesosphere and lower thermosphere. The SABER instrument is a limb scanning infrared radiometer designed to measure temperature of the region as well as a large number of minor constituents. In this study, we review the MaCWAVE rocket results. Next, we investigate the temperature characteristics of the polar mesosphere as a function of spatial and temporal considerations. We have used the most recent SABER dataset (1.07). Weekly averages are used to make comparisons between the winter and summer hemispheres. Furthermore, the data analysis agrees with recent theoretical studies showing that this behavior is a result of anomalous dynamical events in the southern hemisphere. The findings discussed here clearly show the value of scientific rocket flights used in a discovery mode.

Experimental investigation on the caries characteristic of dental tissues by photothermal radiometry scanning imaging

NASA Astrophysics Data System (ADS)

Wang, Fei; Liu, Jun-yan; Wang, Xiao-chun; Wang, Yang

2018-03-01

In this paper, a one-dimensional (1D) thermal-wave model coupled diffuse-photon-density-wave for three-layer dental tissues using modulated laser stimulation was employed to illustrate the relationship between dental caries characteristic (i.e. caries layer thickness, optical absorption coefficient and optical scattering coefficient) and photothermal radiometry (PTR) signal. Experimental investigation of artificial caries was carried out using PTR scanning imaging. The PTR amplitude and phase delay were increased with dental demineralized treatment. The local caries characteristic parameters were obtained by the best-fitting method based on the 1D thermal-wave model. The PTR scanning imaging measurements illustrated that the optical absorption coefficient and scattering coefficient of caries region were much higher than those of the healthy enamel area. The demineralization thickness of caries region was measured by PTR scanning imaging and its average value shows in good agreement with the digital microscope. Experimental results show that PTR scanning imaging has the merits of high contrast for local inhomogeneity of dental caries; furthermore, this method is an allowance to provide a flexibility for non-contact quantitative evaluation of dental caries.

Photocarrier Radiometry for Non-contact Evaluation of Monocrystalline Silicon Solar Cell Under Low-Energy (< 200 keV) Proton Irradiation

NASA Astrophysics Data System (ADS)

Oliullah, Md.; Liu, J. Y.; Song, P.; Wang, Y.

2018-06-01

A three-layer theoretical model is developed for the characterization of the electronic transport properties (lifetime τ, diffusion coefficient D, and surface recombination velocity s) with energetic particle irradiation on solar cells using non-contact photocarrier radiometry. Monte Carlo (MC) simulation is carried out to obtain the depth profiles of the proton irradiation layer at different low energies (< 200 keV). The monocrystalline silicon (c-Si) solar cells are investigated under different low-energy proton irradiation, and the carrier transport parameters of the three layers are obtained by best-fitting of the experimental results. The results show that the low-energy protons have little influence on the transport parameters of the non-irradiated layer, but high influences on both of the p and n-region irradiation layers which are consisted of MC simulation.

Lunar Phase Function at 1064 Nm from Lunar Orbiter Laser Altimeter Passive and Active Radiometry

NASA Technical Reports Server (NTRS)

Barker, M. K.; Sun, X.; Mazarico, E.; Neumann, G. A.; Zuber, M. T.; Smith, D. E.

2016-01-01

We present initial calibration and results of passive radiometry collected by the Lunar Orbiter Laser Altimeter onboard the Lunar Reconnaissance Orbiter over the course of 12 months. After correcting for time- and temperature-dependent dark noise and detector responsivity variations, the LOLA passive radiometry measurements are brought onto the absolute radiance scale of the SELENE Spectral Profiler. The resulting photometric precision is estimated to be 5%. We leverage the unique ability of LOLA to measure normal albedo to explore the 1064 nm phase function's dependence on various geologic parameters. On a global scale, we find that iron abundance and optical maturity (quantified by FeO and OMAT) are the dominant controlling parameters. Titanium abundance (TiO2), surface roughness on decimeter to decameter scales, and soil thermo- physical properties have a smaller effect, but the latter two are correlated with OMAT, indicating that exposure age is the driving force behind their effects in a globally-averaged sense. The phase function also exhibits a dependence on surface slope at approximately 300 m baselines, possibly the result of mass wasting exposing immature material and/or less space weathering due to reduced sky visibility. Modeling the photometric function in the Hapke framework, we find that, relative to the highlands, the maria exhibit decreased backscattering, a smaller opposition effect (OE) width, and a smaller OE amplitude. Immature highlands regolith has a higher backscattering fraction and a larger OE width compared to mature highlands regolith. Within the maria, the backscattering fraction and OE width show little dependence on TiO2 and OMAT. Variations in the phase function shape at large phase angles are observed in and around the Copernican-aged Jackson crater, including its dark halo, a putative impact melt deposit. Finally, the phase function of the Reiner Gamma Formation behaves more optically immature than is typical for its composition

Evidence of the Lower Thermospheric Winter-to-Summer Circulation

NASA Astrophysics Data System (ADS)

Qian, L.; Burns, A. G.; Yue, J.

2017-12-01

Numerical studies showed that the lower thermospheric winter-to-summer circulation is driven by wave dissipation, and it plays a significant role in trace gas distributions in the mesosphere and lower thermosphere (MLT), and in the composition of the thermosphere. Direct observations of this circulation are difficult. However, it leaves clear signatures in tracer distributions. Recent analysis of CO2 observed by the Sounding of the Atmosphere using Broadband Emission Radiometry (SABER) onboard the Thermosphere Ionosphere Mesosphere Energetics and Dynamics satellite showed dynamically driven dense isolines of CO2 at summer high latitudes. We conduct modeling and observational studies to understand the CO2 distribution and circulation patterns in the MLT. We found that there exists maximum vertical gradient of CO2 at summer high latitudes, driven by the convergence of the upwelling of the mesospheric circulation and the downwelling of the lower thermospheric circulation; this maximum vertical gradient of CO2 is located at a higher altitude in the winter hemisphere, driven by the convergence of the upwelling of the lower thermospheric circulation and the downwelling of the solar-driven thermospheric circulation. Based on SABER CO2 distribution, the bottom of the lower thermospheric circulation is located between 95 km and 100 km, and it has a vertical extent of 10 km. Analysis of the SABER CO2 and temperature at summer high latitudes showed that the bottom of this circulation is consistently higher than the mesopause height by 10 km; and its location does not change much between solar maximum and solar minimum.

Temporal Variability of Atomic Hydrogen From the Mesopause to the Upper Thermosphere

NASA Astrophysics Data System (ADS)

Qian, Liying; Burns, Alan G.; Solomon, Stan S.; Smith, Anne K.; McInerney, Joseph M.; Hunt, Linda A.; Marsh, Daniel R.; Liu, Hanli; Mlynczak, Martin G.; Vitt, Francis M.

2018-01-01

We investigate atomic hydrogen (H) variability from the mesopause to the upper thermosphere, on time scales of solar cycle, seasonal, and diurnal, using measurements made by the Sounding of the Atmosphere using Broadband Emission Radiometry (SABER) instrument on the Thermosphere Ionosphere Mesosphere Energetics Dynamics satellite, and simulations by the National Center for Atmospheric Research Whole Atmosphere Community Climate Model-eXtended (WACCM-X). In the mesopause region (85 to 95 km), the seasonal and solar cycle variations of H simulated by WACCM-X are consistent with those from SABER observations: H density is higher in summer than in winter, and slightly higher at solar minimum than at solar maximum. However, mesopause region H density from the Mass-Spectrometer-Incoherent-Scatter (National Research Laboratory Mass-Spectrometer-Incoherent-Scatter 00 (NRLMSISE-00)) empirical model has reversed seasonal variation compared to WACCM-X and SABER. From the mesopause to the upper thermosphere, H density simulated by WACCM-X switches its solar cycle variation twice, and seasonal dependence once, and these changes of solar cycle and seasonal variability occur in the lower thermosphere ( 95 to 130 km), whereas H from NRLMSISE-00 does not change solar cycle and seasonal dependence from the mesopause through the thermosphere. In the upper thermosphere (above 150 km), H density simulated by WACCM-X is higher at solar minimum than at solar maximum, higher in winter than in summer, and also higher during nighttime than daytime. The amplitudes of these variations are on the order of factors of 10, 2, and 2, respectively. This is consistent with NRLMSISE-00.

The Relationship of Safe and Participatory School Environments and Supportive Attitudes toward Violence: Evidence from the Colombian Saber Test of Citizenship Competencies

ERIC Educational Resources Information Center

Diazgranados, Silvia; Noonan, James

2015-01-01

In Colombia, reducing levels of interpersonal and community violence is a key component of the country's approach to citizenship education. In this study, we use data collected during the 2005 Saber test of Citizenship Competencies to examine the relationship of school environments and individual students' supportive attitudes toward violence…

Simultaneous measurement of temperature and emissivity of lunar regolith simulant using dual-channel millimeter-wave radiometry.

PubMed

McCloy, J S; Sundaram, S K; Matyas, J; Woskov, P P

2011-05-01

Millimeter wave (MMW) radiometry can be used for simultaneous measurement of emissivity and temperature of materials under extreme environments (high temperature, pressure, and corrosive environments). The state-of-the-art dual channel MMW passive radiometer with active interferometric capabilities at 137 GHz described here allows for radiometric measurements of sample temperature and emissivity up to at least 1600 °C with simultaneous measurement of sample surface dynamics. These capabilities have been used to demonstrate dynamic measurement of melting of powders of simulated lunar regolith and static measurement of emissivity of solid samples. The paper presents the theoretical background and basis for the dual-receiver system, describes the hardware in detail, and demonstrates the data analysis. Post-experiment analysis of emissivity versus temperature allows further extraction from the radiometric data of millimeter wave viewing beam coupling factors, which provide corroboratory evidence to the interferometric data of the process dynamics observed. These results show the promise of the MMW system for extracting quantitative and qualitative process parameters for industrial processes and access to real-time dynamics of materials behavior in extreme environments.

Mapping Greenland's Firn Aquifer using L-band Microwave Radiometry

NASA Astrophysics Data System (ADS)

Miller, J.; Bringer, A.; Jezek, K. C.; Johnson, J. T.; Scambos, T. A.; Long, D. G.

2016-12-01

Greenland's recently discovered firn aquifer is one of the most interesting, yet still mysterious, components of the ice sheet system. Many open questions remain regarding timescales of refreezing and/or englacial drainage of liquid meltwater, and the connections of firn aquifers to the subglacial hydrological system. If liquid meltwater production at the surface of the Greenland ice sheet continues to increase, subsequent increases in the volume of mobile liquid meltwater retained within Greenland's firn aquifer may increase the possibility of crevasse-deepening via hydrofracture. Hydrofracture is an important component of supraglacial lake drainage leading to at least temporary accelerated flow velocities and ice sheet mass balance changes. Firn aquifers may also support hydrofracture-induced drainage and thus are potentially capable of significantly influencing ice sheet mass balance and sea level rise. Spaceborne L-band microwave radiometers provide an innovative tool for ice-sheet wide mapping of the spatiotemporal variability of Greenland's firn aquifer. Both refreezing and englacial drainage may be observable given the sensitivity of the microwave response to the upper surface of liquid meltwater retained within snow and firn pore space as well as the ability of L band instruments to probe the ice sheet from the surface to the firn-ice transition at pore close-off depth. Here we combine L-band (1.4 GHz) brightness temperature observations from multiple sources to demonstrate the potential of mapping firn aquifers on ice sheets using L-band microwave radiometry. Data sources include the interferometric MIRAS instrument aboard ESA's Soil Moisture and Ocean Salinity (SMOS) satellite mission and the radiometer aboard NASA's Soil Moisture Active Passive (SMAP) satellite mission. We will also present mulit-frequency L-band brightness temperature data (0.5-2 GHz) that will be collected over several firn aquifer areas on the Greenland ice sheet by the Ohio State

Influence of El Nino Southern Oscillation on the Mesospheric Temperature

NASA Technical Reports Server (NTRS)

Li, Tao; Calvo, Natalia; Yue, Jia; Dou, Xiankang; Russell, J. M, III; Mlynczak, M. G.; She, Chiao-Yao; Xue, Xianghui

2013-01-01

Using the middle atmosphere temperature data set observed by the Sounding of the Atmosphere using Broadband Emission Radiometry (SABER) satellite experiment between 2002 and 2012, and temperatures simulated by the Whole Atmospheric Community Climate Model version 3.5 (WACCM3.5) between 1953 and 2005, we studied the influence of El Niño-Southern Oscillation (ENSO) on middle atmosphere temperature during the Northern Hemisphere (NH) wintertime. For the first time, a significant winter temperature response to ENSO in the middle mesosphere has been observed, with an anomalous warming of approximately 1.0 K/MEI (Multivariate ENSO Index) in the tropics and an anomalous cooling of approximately 2.0 K/MEI in the NH middle latitudes. The observed temperature responses to ENSO in the mesosphere are opposite to those in the stratosphere, in agreement with previous modeling studies. Temperature responses to ENSO observed by SABER show similar patterns to those simulated by the WACCM3.5 model. Analysis of the WACCM3.5 residual mean meridional circulation response to ENSO reveals a significant downwelling in the tropical mesosphere and upwelling in the NH middle and high latitudes during warm ENSO events, which is mostly driven by anomalous eastward gravity wave forcing in the NH mesosphere.

A combined solar and geomagnetic index for thermospheric climate

PubMed Central

Mlynczak, Martin G; Hunt, Linda A; Marshall, B Thomas; Russell, James M; Mertens, Christopher J; Thompson, R Earl; Gordley, Larry L

2015-01-01

Infrared radiation from nitric oxide (NO) at 5.3 µm is a primary mechanism by which the thermosphere cools to space. The Sounding of the Atmosphere using Broadband Emission Radiometry (SABER) instrument on the NASA Thermosphere-Ionosphere-Mesosphere Energetics and Dynamics satellite has been measuring thermospheric cooling by NO for over 13 years. In this letter we show that the SABER time series of globally integrated infrared power (watts) radiated by NO can be replicated accurately by a multiple linear regression fit using the F10.7, Ap, and Dst indices. This allows reconstruction of the NO power time series back nearly 70 years with extant databases of these indices. The relative roles of solar ultraviolet and geomagnetic processes in determining the NO cooling are derived and shown to vary significantly over the solar cycle. The NO power is a fundamental integral constraint on the thermospheric climate, and the time series presented here can be used to test upper atmosphere models over seven different solar cycles. Key Points F10.7, Ap, and Dst replicate time series of radiative cooling by nitric oxide Quantified relative roles of solar irradiance, geomagnetism in radiative cooling Establish a new index and extend record of thermospheric cooling back 70 years PMID:26709319

Influence of solar variability on the infrared radiative cooling of the thermosphere from 2002 to 2014.

PubMed

Mlynczak, Martin G; Hunt, Linda A; Mertens, Christopher J; Thomas Marshall, B; Russell, James M; Woods, Thomas; Earl Thompson, R; Gordley, Larry L

2014-04-16

Infrared radiative cooling of the thermosphere by carbon dioxide (CO 2 , 15 µm) and by nitric oxide (NO, 5.3 µm) has been observed for 12 years by the Sounding of the Atmosphere using Broadband Emission Radiometry (SABER) instrument on the Thermosphere-Ionosphere-Mesosphere Energetics and Dynamics satellite. For the first time we present a record of the two most important thermospheric infrared cooling agents over a complete solar cycle. SABER has documented dramatic variability in the radiative cooling on time scales ranging from days to the 11 year solar cycle. Deep minima in global mean vertical profiles of radiative cooling are observed in 2008-2009. Current solar maximum conditions, evidenced in the rates of radiative cooling, are substantially weaker than prior maximum conditions in 2002-2003. The observed changes in thermospheric cooling correlate well with changes in solar ultraviolet irradiance and geomagnetic activity during the prior maximum conditions. NO and CO 2 combine to emit 7 × 10 18 more Joules annually at solar maximum than at solar minimum. First record of thermospheric IR cooling rates over a complete solar cycleIR cooling in current solar maximum conditions much weaker than prior maximumVariability in thermospheric IR cooling observed on scale of days to 11 years.

A combined solar and geomagnetic index for thermospheric climate.

PubMed

Mlynczak, Martin G; Hunt, Linda A; Marshall, B Thomas; Russell, James M; Mertens, Christopher J; Thompson, R Earl; Gordley, Larry L

2015-05-28

Infrared radiation from nitric oxide (NO) at 5.3 µm is a primary mechanism by which the thermosphere cools to space. The Sounding of the Atmosphere using Broadband Emission Radiometry (SABER) instrument on the NASA Thermosphere-Ionosphere-Mesosphere Energetics and Dynamics satellite has been measuring thermospheric cooling by NO for over 13 years. In this letter we show that the SABER time series of globally integrated infrared power (watts) radiated by NO can be replicated accurately by a multiple linear regression fit using the F 10.7 , Ap , and Dst indices. This allows reconstruction of the NO power time series back nearly 70 years with extant databases of these indices. The relative roles of solar ultraviolet and geomagnetic processes in determining the NO cooling are derived and shown to vary significantly over the solar cycle. The NO power is a fundamental integral constraint on the thermospheric climate, and the time series presented here can be used to test upper atmosphere models over seven different solar cycles. F 10.7 , Ap , and Dst replicate time series of radiative cooling by nitric oxide Quantified relative roles of solar irradiance, geomagnetism in radiative cooling Establish a new index and extend record of thermospheric cooling back 70 years.

Assessment of Satellite Ocean Colour Radiometry and Derived Geophysical Products. Chapter 6.1

NASA Technical Reports Server (NTRS)

Melin, Frederic; Franz, Bryan A.

2014-01-01

Standardization of methods to assess and assign quality metrics to satellite ocean color radiometry and derived geophysical products has become paramount with the inclusion of the marine reflectance and chlorophyll-a concentration (Chla) as essential climate variables (ECV; [1]) and the recognition that optical remote sensing of the oceans can only contribute to climate research if and when a continuous succession of satellite missions can be shown to collectively provide a consistent, long-term record with known uncertainties. In 20 years, the community has made significant advancements toward that objective, but providing a complete uncertainty budget for all products and for all conditions remains a daunting task. In the retrieval of marine water-leaving radiance from observed top-of-atmosphere radiance, the sources of uncertainties include those associated with propagation of sensor noise and radiometric calibration and characterization errors, as well as a multitude of uncertainties associated with the modeling and removal of effects from the atmosphere and sea surface. This chapter describes some common approaches used to assess quality and consistency of ocean color satellite products and reviews the current status of uncertainty quantification in the field. Its focus is on the primary ocean color product, the spectrum of marine reflectance Rrs, but uncertainties in some derived products such as the Chla or inherent optical properties (IOPs) will also be considered.

Geodesy by radio interferometry - Water vapor radiometry for estimation of the wet delay

NASA Technical Reports Server (NTRS)

Elgered, G.; Davis, J. L.; Herring, T. A.; Shapiro, I. I.

1991-01-01

An important source of error in VLBI estimates of baseline length is unmodeled variations of the refractivity of the neutral atmosphere along the propagation path of the radio signals. This paper presents and discusses the method of using data from a water vapor radiomete (WVR) to correct for the propagation delay caused by atmospheric water vapor, the major cause of these variations. Data from different WVRs are compared with estimated propagation delays obtained by Kalman filtering of the VLBI data themselves. The consequences of using either WVR data or Kalman filtering to correct for atmospheric propagation delay at the Onsala VLBI site are investigated by studying the repeatability of estimated baseline lengths from Onsala to several other sites. The repeatability obtained for baseline length estimates shows that the methods of water vapor radiometry and Kalman filtering offer comparable accuracies when applied to VLBI observations obtained in the climate of the Swedish west coast. For the most frequently measured baseline in this study, the use of WVR data yielded a 13 percent smaller weighted-root-mean-square (WRMS) scatter of the baseline length estimates compared to the use of a Kalman filter. It is also clear that the 'best' minimum elevationi angle for VLBI observations depends on the accuracy of the determinations of the total propagation delay to be used, since the error in this delay increases with increasing air mass.

C02(nu2)-0 Quenching Rate Coefficient Derived from Coincidental Fort Collins Lidar and SABER Measurements

NASA Technical Reports Server (NTRS)

Feofilov, A. G.; Kutepov, A. A.; She, C. Y.; Smith, A. K.; Pesnell, W. D.; Goldberg, R. A.

2009-01-01

Among the processes governing the energy balance in the mesosphere and lower thermosphere (MLT), the quenching of CO2(V2) vibrational levels in collisions with oxygen atoms plays an important role. However, neither the rate coefficient of this process (k(CO2O)) nor the atomic oxygen concentrations ([O]) in the MLT are well known. The discrepancy between k(CO2O) measured in the lab and retrieved from atmospheric measurements is of about factor of 2.5. At the same time, the discrepancy between [O] in the MLT measured by different instruments is of the same order of magnitude. In this work we used a synergy of a ground based lidar and satellite infrared radiometer to make a further step in understanding of the physics of the region. In this study we apply the night- and daytime temperatures between 80 and 110 km measured by the Colorado State University narrow-band sodium (Na) lidar located at Fort Collins, Colorado for retrieving the product of k(CO2-O) x [O] from the limb radiances in the 15 micron channel measured by the SABER/TIMED instrument for nearly simultaneous common volume measurements of both instruments within +/-1 degree in latitude, +/-2 degrees in longitude and +/-10 minutes in time. We derive k(CO2-O) and its possible variation range from the retrieved product by utilizing the [O] values measured by the SABER and other instruments.

In-vitro detection of artificial caries on vertical dental cavity walls using infrared photothermal radiometry and modulated luminescence

NASA Astrophysics Data System (ADS)

Kim, Jungho; Mandelis, Andreas; Abrams, Stephen H.; Vu, Jaclyn T.; Amaechi, Bennett T.

2012-12-01

The main objective of the study was to investigate the ability of frequency-domain photothermal radiometry (PTR) and modulated luminescence (LUM) to detect secondary caries lesions on the walls of restorations (wall lesions). Changes in experimental PTR-LUM signals due to sequential demineralization on entire vertical walls of sectioned tooth samples were investigated. In addition, transverse micro-radiography (TMR) analysis (used as a gold standard) was conducted to measure the degree of demineralization that occurred in each sample. Statistical correlation between TMR results and PTR-LUM signals was determined using Pearson's correlation coefficient. LUM signals were found to be dominated by the scattered component of the incident laser beam. The more clinically relevant cases of localized demineralization and remineralization on vertical walls were also investigated to examine whether PTR-LUM signals are sensitive to demineralization and remineralization of much smaller areas. The overall results demonstrated that PTR-LUM is sensitive to progressive demineralization and remineralization on vertical walls of sectioned tooth samples.

Simultaneous measurement of temperature and emissivity of lunar regolith simulant using dual-channel millimeter-wave radiometry

DOE Office of Scientific and Technical Information (OSTI.GOV)

McCloy, J. S.; Sundaram, S. K.; Matyas, J.

Millimeter wave (MMW) radiometry can be used for simultaneous measurement of emissivity and temperature of materials under extreme environments (high temperature, pressure, and corrosive environments). The state-of-the-art dual channel MMW passive radiometer with active interferometric capabilities at 137 GHz described here allows for radiometric measurements of sample temperature and emissivity up to at least 1600 °C with simultaneous measurement of sample surface dynamics. These capabilities have been used to demonstrate dynamic measurement of melting of powders of simulated lunar regolith and static measurement of emissivity of solid samples. The paper presents the theoretical background and basis for the dual-receiver system,more » describes the hardware in detail, and demonstrates the data analysis. Post-experiment analysis of emissivity versus temperature allows further extraction from the radiometric data of millimeter wave viewing beam coupling factors, which provide corroboratory evidence to the interferometric data of the process dynamics observed. Finally, these results show the promise of the MMW system for extracting quantitative and qualitative process parameters for industrial processes and access to real-time dynamics of materials behavior in extreme environments.« less

The response of the TIMED/SABER O2 nightglow to solar radiation

NASA Astrophysics Data System (ADS)

Gao, Hong; Xu, Jiyao; William, Ward

2015-04-01

The TIMED/SABER O2 nightglow observations between January 2002 and June 2014 are used to study the response of O2 emission to the solar radiation. both the O2 nightglow emission rate and intensity are found to be positively correlated to the solar radiation. The O2 nightglow emission rate/intensity and F10.7 solar flux index can be expressed by a linear relation very well. The response of the O2 global mean nightglow emission rate to the solar radiation is enhanced with increasing altitude from about 80km, reaches its peak around 92 km and then decreases with increasing altitude. The response of the O2 nightglow intensity to F10.7 index changes with latitude with three peaks around 40S/N and the equator. The response of the O2 global mean nightglow intensity to the solar radiation is about 27 kR/100 sfu, corresponding to 24.1%/100 sfu.

Simultaneous Measurements of Chlorophyll Concentration by Lidar, Fluorometry, above-Water Radiometry, and Ocean Color MODIS Images in the Southwestern Atlantic.

PubMed

Kampel, Milton; Lorenzzetti, João A; Bentz, Cristina M; Nunes, Raul A; Paranhos, Rodolfo; Rudorff, Frederico M; Politano, Alexandre T

2009-01-01

Comparisons between in situ measurements of surface chlorophyll-a concentration (CHL) and ocean color remote sensing estimates were conducted during an oceanographic cruise on the Brazilian Southeastern continental shelf and slope, Southwestern South Atlantic. In situ values were based on fluorometry, above-water radiometry and lidar fluorosensor. Three empirical algorithms were used to estimate CHL from radiometric measurements: Ocean Chlorophyll 3 bands (OC3M(RAD)), Ocean Chlorophyll 4 bands (OC4v4(RAD)), and Ocean Chlorophyll 2 bands (OC2v4(RAD)). The satellite estimates of CHL were derived from data collected by the MODerate-resolution Imaging Spectroradiometer (MODIS) with a nominal 1.1 km resolution at nadir. Three algorithms were used to estimate chlorophyll concentrations from MODIS data: one empirical - OC3M(SAT), and two semi-analytical - Garver, Siegel, Maritorena version 01 (GSM01(SAT)), and Carder(SAT). In the present work, MODIS, lidar and in situ above-water radiometry and fluorometry are briefly described and the estimated values of chlorophyll retrieved by these techniques are compared. The chlorophyll concentration in the study area was in the range 0.01 to 0.2 mg/m(3). In general, the empirical algorithms applied to the in situ radiometric and satellite data showed a tendency to overestimate CHL with a mean difference between estimated and measured values of as much as 0.17 mg/m(3) (OC2v4(RAD)). The semi-analytical GSM01 algorithm applied to MODIS data performed better (rmse 0.28, rmse-L 0.08, mean diff. -0.01 mg/m(3)) than the Carder and the empirical OC3M algorithms (rmse 1.14 and 0.36, rmse-L 0.34 and 0.11, mean diff. 0.17 and 0.02 mg/m(3), respectively). We find that rmsd values between MODIS relative to the in situ radiometric measurements are < 26%, i.e., there is a trend towards overestimation of R(RS) by MODIS for the stations considered in this work. Other authors have already reported over and under estimation of MODIS remotely sensed

Modeling the detectability of vesicoureteral reflux using microwave radiometry

NASA Astrophysics Data System (ADS)

Arunachalam, Kavitha; Maccarini, Paolo F.; De Luca, Valeria; Bardati, Fernando; Snow, Brent W.; Stauffer, Paul R.

2010-09-01

We present the modeling efforts on antenna design, frequency selection and receiver sensitivity estimation to detect vesicoureteral reflux (VUR) using microwave (MW) radiometry as warm urine from the bladder maintained at fever range temperature using a MW hyperthermia device reflows into the kidneys. The radiometer center frequency (fc), frequency band (Δf) and aperture radius (ra) of the physical antenna for kidney temperature monitoring are determined using a simplified universal antenna model with a circular aperture. Anatomical information extracted from the computed tomography (CT) images of children aged 4-6 years is used to construct a layered 3D tissue model. Radiometric antenna efficiency is evaluated in terms of the ratio of the power collected from the target at depth to the total power received by the antenna (η). The power ratio of the theoretical antenna is used to design a microstrip log spiral antenna with directional radiation pattern over fc ± Δf/2. Power received by the log spiral from the deep target is enhanced using a thin low-loss dielectric matching layer. A cylindrical metal cup is proposed to shield the antenna from electromagnetic interference (EMI). Transient thermal simulations are carried out to determine the minimum detectable change in the antenna brightness temperature (δTB) for 15-25 mL urine refluxes at 40-42 °C located 35 mm from the skin surface. Theoretical antenna simulations indicate maximum η over 1.1-1.6 GHz for ra = 30-40 mm. Simulations of the 35 mm radius tapered log spiral yielded a higher power ratio over fc ± Δf/2 for the 35-40 mm deep targets in the presence of an optimal matching layer. Radiometric temperature calculations indicate δTB >= 0.1 K for the 15 mL urine at 40 °C and 35 mm depth. Higher η and δTB were observed for the antenna and matching layer inside the metal cup. Reflection measurements of the log spiral in a saline phantom are in agreement with the simulation data. The numerical study

Analysis of Temperature and Wind Measurements from the TIMED Mission: Comparison with UARS Data

NASA Technical Reports Server (NTRS)

Huang, Frank; Mayr, Hans; Killeen, Tim; Russell, Jim; Reber, Skip

2004-01-01

We report on an analysis of temperature and wind data based respectively on measurements with the SABER (Sounding of the Atmosphere using Broadband Emission Radiometry) and TIDI (TIMED Doppler Interferometer) instruments on the TIMED (Thermosphere-Ionosphere-Mesosphere-Energetics and Dynamics) mission. Comparisons are made with corresponding results obtained from the HRDI (High Resolution Doppler Imager), MLS (Microwave Limb Sounder) and CLAES (Cryogenic Limb Array Etalon Spectrometer) instruments on the UARS (Upper Atmosphere Research Satellite) spacecraft. The TIMED and UARS instruments have important common and uncommon properties in their sampling of the data as a function local solar time. For comparison between the data from the two satellite missions, we present the derived diurnal tidal and zonal-mean variations of temperature and winds, obtained as functions of season, latitude, and altitude. The observations are also compared with results from the Numerical Spectral Model (NSM).

On the relationships between Michaelis–Menten kinetics, reverse Michaelis–Menten kinetics, Equilibrium Chemistry Approximation kinetics and quadratic kinetics

DOE PAGES

Tang, J. Y.

2015-09-03

The Michaelis–Menten kinetics and the reverse Michaelis–Menten kinetics are two popular mathematical formulations used in many land biogeochemical models to describe how microbes and plants would respond to changes in substrate abundance. However, the criteria of when to use which of the two are often ambiguous. Here I show that these two kinetics are special approximations to the Equilibrium Chemistry Approximation kinetics, which is the first order approximation to the quadratic kinetics that solves the equation of enzyme-substrate complex exactly for a single enzyme single substrate biogeochemical reaction with the law of mass action and the assumption of quasi-steady-state formore » the enzyme-substrate complex and that the product genesis from enzyme-substrate complex is much slower than the equilibration between enzyme-substrate complexes, substrates and enzymes. In particular, I showed that the derivation of the Michaelis–Menten kinetics does not consider the mass balance constraint of the substrate, and the reverse Michaelis–Menten kinetics does not consider the mass balance constraint of the enzyme, whereas both of these constraints are taken into account in the Equilibrium Chemistry Approximation kinetics. By benchmarking against predictions from the quadratic kinetics for a wide range of substrate and enzyme concentrations, the Michaelis–Menten kinetics was found to persistently under-predict the normalized sensitivity ∂ ln v / ∂ ln k 2 + of the reaction velocity v with respect to the maximum product genesis rate k 2 +, persistently over-predict the normalized sensitivity ∂ ln v / ∂ ln k 1 + of v with respect to the intrinsic substrate affinity k 1 +, persistently over-predict the normalized sensitivity ∂ ln v / ∂ ln [ E ] T of v with respect the total enzyme concentration [ E ] T and persistently under-predict the normalized sensitivity ∂ ln v / ∂ ln [ S ] T of v with respect to the total substrate concentration [ S ] T

Solar Cycle Variations of SABER CO2 and MLS H2O in the Mesosphere and Lower Thermosphere Region

NASA Astrophysics Data System (ADS)

Salinas, C. C. J.; Chang, L. C.; Liang, M. C.; Qian, L.; Yue, J.; Russell, J. M., III; Mlynczak, M. G.

2017-12-01

This work aims to present the solar cycle variations of SABER CO2 and MLS H2O in the Mesosphere and Lower Thermosphere region. These observations are then compared to SD-WACCM outputs of CO2 and H2O in order to understand their physical mechanisms. After which, we attempt to model their solar cycle variations using the default TIME-GCM and the TIME-GCM with MERRA reanalysis as lower-boundary conditions. Comparing the outputs of the default TIME-GCM and TIME-GCM with MERRA will give us insight into the importance of solar forcing and lower atmospheric forcing on the solar cycle variations of CO2 and H2O. The solar cycle influence in the parameters are calculated by doing a multiple linear regression with the F10.7 index. The solar cycle of SABER CO2 is reliable above 1e-2 mb and below 1e-3 mb. Preliminary results from the observations show that SABER CO2 has a stronger negative anomaly due to the solar cycle over the winter hemisphere. MLS H2O is reliable until 1e-2. Preliminary results from the observations show that MLS H2O also has a stronger negative anomaly due to the solar cycle over the winter hemisphere. Both SD-WACCM and the default TIME-GCM reproduce these stronger anomalies over the winter hemisphere. An analysis of the tendency equations in SD-WACCM and default TIME-GCM then reveal that for CO2, the stronger winter anomaly may be attributed to stronger downward transport over the winter hemisphere. For H2O, an analysis of the tendency equations in SD-WACCM reveal that the stronger winter anomaly may be attributed to both stronger downward transport and stronger photochemical loss. On the other hand, in the default TIME-GCM, the stronger winter anomaly in H2O may only be attributed to stronger downward transport. For both models, the stronger downward transport is attributed to enhanced stratospheric polar winter jet during solar maximum. Future work will determine whether setting the lower boundary conditions of TIME-GCM with MERRA will improve the match

On the relationships between the Michaelis–Menten kinetics, reverse Michaelis–Menten kinetics, equilibrium chemistry approximation kinetics, and quadratic kinetics

DOE Office of Scientific and Technical Information (OSTI.GOV)

Tang, J. Y.

The Michaelis–Menten kinetics and the reverse Michaelis–Menten kinetics are two popular mathematical formulations used in many land biogeochemical models to describe how microbes and plants would respond to changes in substrate abundance. However, the criteria of when to use either of the two are often ambiguous. Here I show that these two kinetics are special approximations to the equilibrium chemistry approximation (ECA) kinetics, which is the first-order approximation to the quadratic kinetics that solves the equation of an enzyme–substrate complex exactly for a single-enzyme and single-substrate biogeochemical reaction with the law of mass action and the assumption of a quasi-steadymore » state for the enzyme–substrate complex and that the product genesis from enzyme–substrate complex is much slower than the equilibration between enzyme–substrate complexes, substrates, and enzymes. In particular, I show that the derivation of the Michaelis–Menten kinetics does not consider the mass balance constraint of the substrate, and the reverse Michaelis–Menten kinetics does not consider the mass balance constraint of the enzyme, whereas both of these constraints are taken into account in deriving the equilibrium chemistry approximation kinetics. By benchmarking against predictions from the quadratic kinetics for a wide range of substrate and enzyme concentrations, the Michaelis–Menten kinetics was found to persistently underpredict the normalized sensitivity ∂ ln v / ∂ ln k 2 + of the reaction velocity v with respect to the maximum product genesis rate k 2 +, persistently overpredict the normalized sensitivity ∂ ln v / ∂ ln k 1 + of v with respect to the intrinsic substrate affinity k 1 +, persistently overpredict the normalized sensitivity ∂ ln v / ∂ ln [ E] T of v with respect the total enzyme concentration [ E] T, and persistently underpredict the normalized sensitivity ∂ ln v / ∂ ln [ S] T of v with respect to the total substrate

On the relationships between the Michaelis–Menten kinetics, reverse Michaelis–Menten kinetics, equilibrium chemistry approximation kinetics, and quadratic kinetics

DOE PAGES

Tang, J. Y.

2015-12-01

The Michaelis–Menten kinetics and the reverse Michaelis–Menten kinetics are two popular mathematical formulations used in many land biogeochemical models to describe how microbes and plants would respond to changes in substrate abundance. However, the criteria of when to use either of the two are often ambiguous. Here I show that these two kinetics are special approximations to the equilibrium chemistry approximation (ECA) kinetics, which is the first-order approximation to the quadratic kinetics that solves the equation of an enzyme–substrate complex exactly for a single-enzyme and single-substrate biogeochemical reaction with the law of mass action and the assumption of a quasi-steadymore » state for the enzyme–substrate complex and that the product genesis from enzyme–substrate complex is much slower than the equilibration between enzyme–substrate complexes, substrates, and enzymes. In particular, I show that the derivation of the Michaelis–Menten kinetics does not consider the mass balance constraint of the substrate, and the reverse Michaelis–Menten kinetics does not consider the mass balance constraint of the enzyme, whereas both of these constraints are taken into account in deriving the equilibrium chemistry approximation kinetics. By benchmarking against predictions from the quadratic kinetics for a wide range of substrate and enzyme concentrations, the Michaelis–Menten kinetics was found to persistently underpredict the normalized sensitivity ∂ ln v / ∂ ln k 2 + of the reaction velocity v with respect to the maximum product genesis rate k 2 +, persistently overpredict the normalized sensitivity ∂ ln v / ∂ ln k 1 + of v with respect to the intrinsic substrate affinity k 1 +, persistently overpredict the normalized sensitivity ∂ ln v / ∂ ln [ E] T of v with respect the total enzyme concentration [ E] T, and persistently underpredict the normalized sensitivity ∂ ln v / ∂ ln [ S] T of v with respect to the total substrate

Observations of Infrared Radiative Cooling in the Thermosphere on Daily to Multiyear Timescales from the TIMED/SABER Instrument

NASA Technical Reports Server (NTRS)

Mlynczak, Martin G.; Hunt, Linda A.; Marshall, B. Thomas; Martin-Torres, F. Javier; Mertens, Christopher J.; Russell, James M., III; Remsberg, Ellis E.; Lopez-Puertas, Manuel; Picard, Richard; Winick, Jeremy;

Petroscirtes pylei, a new saber-toothed blenny from the Fiji Islands (Teleostei: Blenniidae)

USGS Publications Warehouse

Smith-Vaniz, W.F.

2005-01-01

Petroscirtes pylei is described from three specimens, 20.3-40.9 mm SL, obtained from a deep-water reef off Suva, Viti Levu, Fiji Islands. It is distinguished from all other congeners by its color pattern, including the presence of two dark body stripes, the lower one broadly extending onto the anal fin, and the dorsal fin with a broad, dark basal stripe, superimposed by a conspicuous white spot centered on the 4th spine. Among Petroscirtes, only the new species and P. springeri typically have 12 dorsal-fin spines but they are not closely related. The holotype was collected in 104-110 m, the second deepest depth record for a species of Petroscirtes. Discovery of this new species, and an apparently second new deep-water Petroscrites (uncollected), at a different Fijian reef indicates that our knowledge of the biodiversity of this habitat and of the saber-toothed blennies is very incomplete. Copyright ?? 2005 Magnolia Press.

Modeling the detectability of vesicoureteral reflux using microwave radiometry.

PubMed

Arunachalam, Kavitha; Maccarini, Paolo F; De Luca, Valeria; Bardati, Fernando; Snow, Brent W; Stauffer, Paul R

2010-09-21

We present the modeling efforts on antenna design, frequency selection and receiver sensitivity estimation to detect vesicoureteral reflux (VUR) using microwave (MW) radiometry as warm urine from the bladder maintained at fever range temperature using a MW hyperthermia device reflows into the kidneys. The radiometer center frequency (f(c)), frequency band (Deltaf) and aperture radius (r(a)) of the physical antenna for kidney temperature monitoring are determined using a simplified universal antenna model with a circular aperture. Anatomical information extracted from the computed tomography (CT) images of children aged 4-6 years is used to construct a layered 3D tissue model. Radiometric antenna efficiency is evaluated in terms of the ratio of the power collected from the target at depth to the total power received by the antenna (eta). The power ratio of the theoretical antenna is used to design a microstrip log spiral antenna with directional radiation pattern over f(c) +/- Deltaf/2. Power received by the log spiral from the deep target is enhanced using a thin low-loss dielectric matching layer. A cylindrical metal cup is proposed to shield the antenna from electromagnetic interference (EMI). Transient thermal simulations are carried out to determine the minimum detectable change in the antenna brightness temperature (deltaT(B)) for 15-25 mL urine refluxes at 40-42 degrees C located 35 mm from the skin surface. Theoretical antenna simulations indicate maximum eta over 1.1-1.6 GHz for r(a) = 30-40 mm. Simulations of the 35 mm radius tapered log spiral yielded a higher power ratio over f(c) +/- Deltaf/2 for the 35-40 mm deep targets in the presence of an optimal matching layer. Radiometric temperature calculations indicate deltaT(B) 0.1 K for the 15 mL urine at 40 degrees C and 35 mm depth. Higher eta and deltaT(B) were observed for the antenna and matching layer inside the metal cup. Reflection measurements of the log spiral in a saline phantom are in agreement

Comparison of VLT/X-shooter OH and O2 rotational temperatures with consideration of TIMED/SABER emission and temperature profiles

NASA Astrophysics Data System (ADS)

Noll, S.; Kausch, W.; Kimeswenger, S.; Unterguggenberger, S.; Jones, A. M.

2015-11-01

Rotational temperatures Trot derived from lines of the same OH band are an important method to study the dynamics and long-term trends in the mesopause region near 87 km. To measure realistic temperatures, a corresponding Boltzmann distribution of the rotational level populations has to be achieved. However, this might not be fulfilled, especially at high emission altitudes. In order to quantify possible non-local thermodynamic equilibrium (non-LTE) contributions to the OH Trot as a function of the upper vibrational level v', we studied a sample of 343 echelle spectra taken with the X-shooter spectrograph at the Very Large Telescope at Cerro Paranal in Chile. These data allowed us to analyse 25 OH bands in each spectrum. Moreover, we could measure lines of O2b(0-1), which peaks at about 94 to 95 km, and O2a(0-0) with an emission peak at about 90 km. The latter altitude is reached in the second half of the night after a rise of several km because of the decay of a daytime population of excited O2. Since the radiative lifetimes for the upper levels of the two O2 bands are relatively long, the derived Trot are not significantly affected by non-LTE contributions. These bands are well suited for a comparison with OH if the differences in the emission profiles are corrected. For different sample averages, we made these corrections by using OH emission, O2a(0-0) emission, and CO2-based temperature profile data from the multi-channel radiometer SABER on the TIMED satellite. The procedure relies on differences of profile-weighted SABER temperatures. For an O2a(0-0)-based reference profile at 90 km, we found a good agreement of the O2 with the SABER-related temperatures, whereas the OH temperatures, especially for the high and even v', showed significant excesses with a maximum of more than 10 K for v' = 8. The exact value depends on the selected lines and molecular parameters. We could also find a nocturnal trend towards higher non-LTE effects, particularly for high v'. The

Annual and interannual variations in global 6.5DWs from 20 to 110 km during 2002-2016 observed by TIMED/SABER

NASA Astrophysics Data System (ADS)

Huang, Y. Y.; Zhang, S. D.; Li, C. Y.; Li, H. J.; Huang, K. M.; Huang, C. M.

2017-08-01

Using version 2.0 of the TIMED/SABER kinetic temperature data, we have conducted a study on the annual and interannual variations of 6.5DWs at 20-110 km, from 52°S to 52°N for 2002-2016. First, we obtained global annual variations in the spectral power and amplitudes of 6.5DWs. We found that strong wave amplitudes emerged from 25°S/N to 52°S/N and peaked in the altitudes of the stratosphere, mesosphere, and the lower thermosphere. The annual variations in the 6.5DWs are similar in both hemispheres but different at various altitudes. At 40-50 km, the annual maxima emerge mostly in winters. In the MLT, annual peaks occurred twice every half year. At 80-90 km, 6.5DWs appeared mainly in equinoctial seasons and winters. At 100-110 km, 6.5DWs emerged mainly in equinoctial seasons. Second, we continued the study of the interannual variations in 6.5DW amplitudes from 2002 to 2016. Frequency spectra of the monthly mean amplitudes showed that main dynamics in the long-term variations of 6.5DWs were AO and SAO in both hemispheres. In addition, 4 month period signals were noticed in the MLT of the NH. The amplitudes of SAO and AO were obtained using a band-pass filter and were found to increase with altitude, as do the 6.5DW amplitudes. In both hemispheres, the relative importance of SAO and AO changes with altitude. At 40-50 and 100-110 km, AO play a dominant role, while at 80-90 km, they are weaker than SAO. Our results show that both the annual and interannual variations in 6.5DWs are mainly caused by the combined action of SAO and AO.

Passive monitoring using a combination of focused and phased array radiometry: a simulation study.

PubMed

Farantatos, Panagiotis; Karanasiou, Irene S; Uzunoglu, Nikolaos

2011-01-01

Aim of this simulation study is to use the focusing properties of a conductive ellipsoidal reflector in conjunction with directive phased microwave antenna configurations in order to achieve brain passive monitoring with microwave radiometry. One of the main modules of the proposed setup which ensures the necessary beamforming and focusing on the body and brain areas of interest is a symmetrical axis ellipsoidal conductive wall cavity. The proposed system operates in an entirely non-invasive contactless manner providing temperature and/or conductivity variations monitoring and is designed to also provide hyperthermia treatment. In the present paper, the effect of the use of patch antennas as receiving antennas on the system's focusing properties and specifically the use of phased array setups to achieve scanning of the areas under measurement is investigated. Extensive simulations to compute the electric field distributions inside the whole ellipsoidal reflector and inside two types of human head models were carried out using single and two element microstrip patch antennas. The results show that clear focusing (creation of "hot spots") inside the head models is achieved at 1.53GHz. In the case of the two element antennas, the "hot spot" performs a linear scan around the brain area of interest while the phase difference of the two microstrip patch antennas significantly affects the way the scanning inside the head model is achieved. In the near future, phased array antennas with multiband and more elements will be used in order to enhance the system scanning properties toward the acquisition of tomography images without the need of subject movement.

Geological and Structural Patterns on Titan Enhanced Through Cassini's SAR PCA and High-Resolution Radiometry

NASA Astrophysics Data System (ADS)

Paganelli, F.; Schubert, G.; Lopes, R. M. C.; Malaska, M.; Le Gall, A. A.; Kirk, R. L.

2016-12-01

The current SAR data coverage on Titan encompasses several areas in which multiple radar passes are present and overlapping, providing additional information to aid the interpretation of geological and structural features. We exploit the different combinations of look direction and variable incidence angle to examine Cassini Synthetic Aperture RADAR (SAR) data using the Principal Component Analysis (PCA) technique and high-resolution radiometry, as a tool to aid in the interpretation of geological and structural features. Look direction and variable incidence angle is of particular importance in the analysis of variance in the images, which aid in the perception and identification of geological and structural features, as extensively demonstrated in Earth and planetary examples. The PCA enhancement technique uses projected non-ortho-rectified SAR imagery in order to maintain the inherent differences in scattering and geometric properties due to the different look directions, while enhancing the geometry of surface features. The PC2 component provides a stereo view of the areas in which complex surface features and structural patterns can be enhanced and outlined. We focus on several areas of interest, in older and recently acquired flybys, in which evidence of geological and structural features can be enhanced and outlined in the PC1 and PC2 components. Results of this technique provide enhanced geometry and insights into the interpretation of the observed geological and structural features, thus allowing a better understanding towards the geology and tectonics on Titan.

Experimental investigation of demineralization and remineralization of human teeth using infrared photothermal radiometry and modulated luminescence

NASA Astrophysics Data System (ADS)

Jeon, Raymond J.; Hellen, Adam; Matvienko, Anna; Mandelis, Andreas; Abrams, Stephen H.; Amaechi, Bennett T.

2008-02-01

Photothermal radiometry (PTR) and modulated luminescence (LUM) were applied to detect and monitor the demineralization of root and enamel surfaces of human teeth to produce caries lesions and the subsequent remineralization of the produced lesions. The experimental set-up consisted of a semiconductor laser (659 nm, 120 mW), a mercury-cadmium-telluride IR detector for PTR, a photodiode for LUM, and two lock-in amplifiers. A lesion was created on a 1-mm × 4-mm rectangular window, spanning root to enamel surface, using an artificial caries lesion gel to demineralize the tooth surface and create small carious lesions. The samples were subsequently immersed in a remineralization solution. Each sample was examined with PTR/LUM on root and enamel before and after treatment at times from 1 to 10 days of demineralization and 2 to 10 days of remineralization. PTR/LUM signals showed gradual and consistent changes with treatment time. At the completion of the experiments, transverse micro-radiography (TMR) analysis was performed to correlate the PTR/LUM signals to depth of the carious lesions and mineral losses. In this study, TMR showed good correlation with PTR/LUM. It was also found that treatment duration did not correlate well to any technique, PTR/LUM, or TMR, which is indicative of significant variations in demineralization - remineralization rates among different teeth.

Tracing the Inter-Hemispheric Coupling During Polar Summer Periods of 2002-2010 Using TIMED/SABER Measurements

NASA Technical Reports Server (NTRS)

Goldberg, Richard; Feoflow, Artem; Pesnell, Dean; Kutepov, Alexander

2010-01-01

It has been found that for more than one polar summer season between 2002-2010, the northern polar mesospheric region near and above the mesospheric maximum was warmer than normal. The strongest warming effect of this type was observed to occur during northern summer 2002. Theoretical studies have implied that these "anomalies" were preceded by unusual dynamical processes occurring in the southern hemisphere. We have analyzed temperature distributions measured by the SABER limb scanning infrared radiometer aboard the NASA TIMED satellite between 2002-2010 at altitudes from 15 to 110 km and for latitudes between 83 deg. S to 83 deg. N. We describe the approach to trace the inter-hemispheric temperature correlatoins and to identify the global features that were unique for the "anomalous" northern polar summers.

Geodesy by radio interferometry: Water vapor radiometry for estimation of the wet delay

DOE Office of Scientific and Technical Information (OSTI.GOV)

Elgered, G.; Davis, J.L.; Herring, T.A.

1991-04-10

An important source of error in very-long-baseline interferometry (VLBI) estimates of baseline length is unmodeled variations of the refractivity of the neutral atmosphere along the propagation path of the radio signals. The authors present and discuss the method of using data from a water vapor readiometer (WVR) to correct for the propagation delay caused by atmospheric water vapor, the major cause of these variations. Data from different WVRs are compared with estimated propagation delays obtained by Kalman filtering of the VLBI data themselves. The consequences of using either WVR data of Kalman filtering to correct for atmospheric propagation delay atmore » the Onsala VLBI site are investigated by studying the repeatability of estimated baseline lengths from Onsala to several other sites. The lengths of the baselines range from 919 to 7,941 km. The repeatability obtained for baseline length estimates shows that the methods of water vapor radiometry and Kalman filtering offer comparable accuracies when applied to VLBI observations obtained in the climate of the Swedish west coast. The use of WVR data yielded a 13% smaller weighted-root-mean-square (WRMS) scatter of the baseline length estimates compared to the use of a Kalman filter. It is also clear that the best minimum elevation angle for VLBI observations depends on the accuracy of the determinations of the total propagation delay to be used, since the error in this delay increases with increasing air mass. For use of WVR data along with accurate determinations of total surface pressure, the best minimum is about 20{degrees}; for use of a model for the wet delay based on the humidity and temperature at the ground, the best minimum is about 35{degrees}.« less

The variability of SE2 tide extracted from TIMED/SABER observations

NASA Astrophysics Data System (ADS)

Li, Xing; Wan, Weixing; Ren, Zhipeng; Yu, You

2017-02-01

Based on the temperature observations of the TIMED/Sounding of the Atmosphere using Broadband Emission Radiometry in mesosphere/lower thermosphere region (70-110 km altitudes) and at the low latitude and midlatitude (45°S-45°N) from 2002 to 2012, the variability of the nonmigrating tide SE2 with 1 day resolution is analyzed, using the method from Li et al. (2015). It is found that the climatological features (large-scale variability) of the SE2 tide are similar with the results from the previous research works. The SE2 tide manifests mainly at the low-mid latitudes around ±30°. The northern hemisphere tidal amplitudes below 110 km are larger than the southern hemisphere tide. SE2 peaks below 110 km mainly present between 100 and 110 km altitude. The tidal amplitudes below 110 km occur a north-south asymmetry about the equator in the annual variation: in the southern hemisphere, SE2 occurs with an obvious annual variation with a maximum of tidal amplitudes in December, while in the northern one, the semiannual variations with maximum at the equinoxes. Herein, owing to the high-resolution tidal data, we could research the short-term (day-to-day) variations of SE2. We found that the day-to-day variations manifest mainly at between 100 and 110 km altitudes; it increases gradually with latitudes, and it is stronger at the low-mid latitudes; it is relatively slightly stronger around solstices than equinoxes; and it does not present a remarkably interannual variation. The SE2 day-to-day variations may be composed by the absolute amplitudes' variance and the impact of the wave phases, and the latter ones are more important.

A study of the middle atmospheric thermal structure over western India: Satellite data and comparisons with models

NASA Astrophysics Data System (ADS)

Sharma, Som; Kumar, Prashant; Vaishnav, Rajesh; Jethva, Chintan; Beig, G.

2017-12-01

Long term variations of the middle atmospheric thermal structure in the upper stratosphere and lower mesosphere (20-90 km) have been studied over Ahmedabad (23.1°N, 72.3°E, 55 m amsl), India using SABER (Sounding of the Atmosphere using Broadband Emission Radiometry) onboard TIMED (Thermosphere, Ionosphere, Mesosphere, Energetics and Dynamics) observations during year 2002 to year 2014. For the same period, three different atmospheric models show over-estimation of temperature (∼10 K) near the stratopause and in the upper mesosphere, and a signature of under-estimation is seen above mesopause when compared against SABER measured temperature profiles. Estimation of monthly temperature anomalies reveals a semiannual and ter-annual oscillation moving downward from the mesosphere to the stratosphere during January to December. Moreover, Lomb Scargle periodogram (LSP) and Wavelet transform techniques are employed to characterize the semi-annual, annual and quasi-biennial oscillations to diagnose the wave dynamics in the stratosphere-mesosphere system. Results suggested that semi-annual, annual and quasi-biennial oscillations are exist in stratosphere, whereas, semi-annual and annual oscillations are observed in mesosphere. In lower mesosphere, LSP analyses revealed conspicuous absence of annual oscillations in altitude range of ∼55-65 km, and semi-annual oscillations are not existing in 35-45 km. Four monthly oscillations are also reported in the altitude range of about 45-65 km. The temporal localization of oscillations using wavelet analysis shows strong annual oscillation during year 2004-2006 and 2009-2011.

Annual and inter-annual variations of 6.5-day-planetary-waves in MLT observed by TIMED/SABER

NASA Astrophysics Data System (ADS)

Huang, Yingying; Li, Huijun; Li, Chongyin; Zhang, Shaodong

2017-04-01

Annual and inter-annual variations of 6.5DWs in 20-110 km, 52°S-52°N, 2002-2016 are studied by using v2.0 TIMED/SABER kinetic temperature data. Firstly, global annual variations of 6.5DW's spectral power and amplitudes are obtained. Strong wave amplitudes emerge in 30°S/N-50°S/N, and peaks in altitude separate in stratosphere (40-50 km), mesosphere (80-90 km) and the lower thermosphere (100-110 km), respectively. Their annual variations are similar in both hemispheres, but different in altitude. In 40-50 km, the annual maximums emerge mostly in winters: Dec.-Jan. in the NH and Jul.-Aug. in the SH. In MLT, annual peaks arise twice in each half of year. In 80-90 km, they're mainly in equinoctial seasons and winters: May, Aug.-Sep. and Jan. in the NH and Feb., Nov. and May in the SH. In 100-110 km, they emerge mainly in equinoctial seasons: Apr.-May and Aug.-Sep. in the NH and Feb.-Mar. and Oct.-Nov. in the SH. Then, inter-annual variations of 6.5DW amplitudes during the 14-year period are studied. Frequency spectra of monthly-mean amplitudes show that, main dynamics in long-term variations of 6.5DWs are AO and SAO in both hemispheres. Besides, QBO are visible in both hemispheres and 4-month period signals are noticed in the NH in MLT. Amplitudes of SAO, AO and QBO are obtained by bandpass filter. Their amplitudes are comparable in stratosphere and mesosphere, and QBO signals are weaker than the others in the LT. Vertical variations both of SAO and AO amplitudes are very stable. AO structures have little inter-annual changes, while inter-annual variations of SAO are significant and are related with 6.5DW. It means that annual and inter-annual variations of 6.5DW are mainly controlled by AO and SAO, respectively. Although QBO signals are weaker and their variations are less regular than AO and SAO, their phases seems to relate with inter-annual variations of 6.5DW as well.

Detection of greenbug infestation on wheat using ground-based radiometry

NASA Astrophysics Data System (ADS)

Yang, Zhiming

Scope of methods of study. The purpose of this greenhouse study was to characterize stress in wheat caused by greenbugs using ground-based radiometry. Experiments were conducted to (a) identify spectral bands and vegetation indices sensitive to greenbug infestation; (b) differentiate stress caused due to greenbugs from water stress; (c) examine the impacts of plant growth stage on detection of greenbug infestation; and (d) compare infestations due to greenbug and Russian wheat aphid. Wheat (variety-TAM 107) was planted (seed spacing 1 in. x 3 in.) in plastic flats with dimension 24 in. x 16 in. x 8.75 in. Fifteen days after sowing, wheat seedlings were infested with greenbugs (biotype-E). Nadir measurement of canopy reflectance started the day after infestation and lasted until most infested plants were dead. Using a 16-band Cropscan radiometer, spectral reflectance data were collected daily (between 13:00--14:00 hours) and 128 vegetation indices were derived in addition to greenbug counts per tiller. Using SAS PROC MIXED, sensitivity of band and vegetation indices was identified based on Threshold Day. Subsequent to Threshold Day there was a consistent significant spectral difference between control and infested plants. Sensitivity of band and vegetation indices was further examined using correlation and relative sensitivity analyses. Findings and conclusions. Results show that it is possible to detect greenbug-induced stress on wheat using hand-held radiometers, such as Cropscan. Band 694 nm and the ratio-based vegetation index (RVI) derived from the band 694 nm and 800 nm were identified as most sensitive to greenbug infestation. Landsat TM bands and their derived vegetation indices also show potential for detecting wheat stress caused by greenbug infestation. Also, RVIs particularly derived using spectral band 694 nm and 800 nm were found useful in differentiating greenbug infestation from water stress. Furthermore, vegetation indices such as Normalized total

On the distortions in calculated GW parameters during slanted atmospheric soundings

NASA Astrophysics Data System (ADS)

de la Torre, Alejandro; Alexander, Peter; Schmidt, Torsten; Llamedo, Pablo; Hierro, Rodrigo

2018-03-01

The significant distortions introduced in the measured atmospheric gravity wavelengths by soundings other than those in vertical and horizontal directions, are discussed as a function of the elevation angle of the sounding path and the gravity wave aspect ratio. Under- or overestimation of real vertical wavelengths during the measurement process depends on the value of these two parameters. The consequences of these distortions on the calculation of the energy and the vertical flux of horizontal momentum are analyzed and discussed in the context of two experimental limb satellite setups: GPS-LEO radio occultations and TIMED/SABER ((Atmosphere using Broadband Emission Radiometry/Thermosphere-Ionosphere-Mesosphere-Energetics and Dynamics)) measurements. Possible discrepancies previously found between the momentum flux calculated from satellite temperature profiles, on site and from model simulations, may to a certain degree be attributed to these distortions. A recalculation of previous momentum flux climatologies based on these considerations seems to be a difficult goal.

Simultaneous mesosphere-thermosphere-ionosphere parameter measurements over Gadanki (13.5°N, 79.2°E): First results

NASA Astrophysics Data System (ADS)

Taori, A.; Dashora, N.; Raghunath, K.; Russell, J. M., III; Mlynczak, Martin G.

2011-07-01

We report first simultaneous airglow, lidar, and total electron content measurements in the mesosphere-thermosphere-ionosphere system behavior from Gadanki (13.5°N, 79.2°E). The observed variability in mesospheric temperatures and 630 nm thermospheric emission intensity shows large variations from one night to another with clear upward propagating waves at mesospheric altitudes. The deduced mesospheric temperatures compare well with Sounding of the Atmosphere Using Broadband Emission Radiometry (SABER)-derived temperatures, while the variability agrees well with lidar temperatures (on the night of simultaneous observations). The 630.0 nm thermospheric emission intensity and GPS-total electron content data exhibit occurrence of plasma depletions on the nights of 22-23 October and 22-23 May 2009, while no depletions are noted on the nearby nights of 23-24 October and 21-22 May 2009. These first simultaneous data reveal strong gravity-wave growth at upper mesospheric altitudes on the nights when plasma depletions were noted.

Stable microwave radiometry system for long term monitoring of deep tissue temperature

NASA Astrophysics Data System (ADS)

Stauffer, Paul R.; Rodriques, Dario B.; Salahi, Sara; Topsakal, Erdem; Oliveira, Tiago R.; Prakash, Aniruddh; D'Isidoro, Fabio; Reudink, Douglas; Snow, Brent W.; Maccarini, Paolo F.

2013-02-01

Background: There are numerous clinical applications for non-invasive monitoring of deep tissue temperature. We present the design and experimental performance of a miniature radiometric thermometry system for measuring volume average temperature of tissue regions located up to 5cm deep in the body. Methods: We constructed a miniature sensor consisting of EMI-shielded log spiral microstrip antenna with high gain onaxis and integrated high-sensitivity 1.35GHz total power radiometer with 500 MHz bandwidth. We tested performance of the radiometry system in both simulated and experimental multilayer phantom models of several intended clinical measurement sites: i) brown adipose tissue (BAT) depots within 2cm of the skin surface, ii) 3-5cm deep kidney, and iii) human brain underlying intact scalp and skull. The physical models included layers of circulating tissue-mimicking liquids controlled at different temperatures to characterize our ability to quantify small changes in target temperature at depth under normothermic surface tissues. Results: We report SAR patterns that characterize the sense region of a 2.6cm diameter receive antenna, and radiometric power measurements as a function of deep tissue temperature that quantify radiometer sensitivity. The data demonstrate: i) our ability to accurately track temperature rise in realistic tissue targets such as urine refluxed from prewarmed bladder into kidney, and 10°C drop in brain temperature underlying normothermic scalp and skull, and ii) long term accuracy and stability of +0.4°C over 4.5 hours as needed for monitoring core body temperature over extended surgery or monitoring effects of brown fat metabolism over an extended sleep/wake cycle. Conclusions: A non-invasive sensor consisting of 2.6cm diameter receive antenna and integral 1.35GHz total power radiometer has demonstrated sufficient sensitivity to track clinically significant changes in temperature of deep tissue targets underlying normothermic surface

Stable Microwave Radiometry System for Long Term Monitoring of Deep Tissue Temperature.

PubMed

Stauffer, Paul R; Rodriques, Dario B; Salahi, Sara; Topsakal, Erdem; Oliveira, Tiago R; Prakash, Aniruddh; D'Isidoro, Fabio; Reudink, Douglas; Snow, Brent W; Maccarini, Paolo F

2013-02-26

There are numerous clinical applications for non-invasive monitoring of deep tissue temperature. We present the design and experimental performance of a miniature radiometric thermometry system for measuring volume average temperature of tissue regions located up to 5cm deep in the body. We constructed a miniature sensor consisting of EMI-shielded log spiral microstrip antenna with high gain on-axis and integrated high-sensitivity 1.35GHz total power radiometer with 500 MHz bandwidth. We tested performance of the radiometry system in both simulated and experimental multilayer phantom models of several intended clinical measurement sites: i) brown adipose tissue (BAT) depots within 2cm of the skin surface, ii) 3-5cm deep kidney, and iii) human brain underlying intact scalp and skull. The physical models included layers of circulating tissue-mimicking liquids controlled at different temperatures to characterize our ability to quantify small changes in target temperature at depth under normothermic surface tissues. We report SAR patterns that characterize the sense region of a 2.6cm diameter receive antenna, and radiometric power measurements as a function of deep tissue temperature that quantify radiometer sensitivity. The data demonstrate: i) our ability to accurately track temperature rise in realistic tissue targets such as urine refluxed from prewarmed bladder into kidney, and 10°C drop in brain temperature underlying normothermic scalp and skull, and ii) long term accuracy and stability of ∓0.4°C over 4.5 hours as needed for monitoring core body temperature over extended surgery or monitoring effects of brown fat metabolism over an extended sleep/wake cycle. A non-invasive sensor consisting of 2.6cm diameter receive antenna and integral 1.35GHz total power radiometer has demonstrated sufficient sensitivity to track clinically significant changes in temperature of deep tissue targets underlying normothermic surface tissues for clinical applications like the

Vegetation optical depth measured by microwave radiometry as an indicator of tree mortality risk

NASA Astrophysics Data System (ADS)

Rao, K.; Anderegg, W.; Sala, A.; Martínez-Vilalta, J.; Konings, A. G.

2017-12-01

Increased drought-related tree mortality has been observed across several regions in recent years. Vast spatial extent and high temporal variability makes field monitoring of tree mortality cumbersome and expensive. With global coverage and high temporal revisit, satellite remote sensing offers an unprecedented tool to monitor terrestrial ecosystems and identify areas at risk of large drought-driven tree mortality events. To date, studies that use remote sensing data to monitor tree mortality have focused on external climatic thresholds such as temperature and evapotranspiration. However, this approach fails to consider internal water stress in vegetation - which can vary across trees even for similar climatic conditions due to differences in hydraulic behavior, soil type, etc - and may therefore be a poor basis for measuring mortality events. There is a consensus that xylem hydraulic failure often precedes drought-induced mortality, suggesting depleted canopy water content shortly before onset of mortality. Observations of vegetation optical depth (VOD) derived from passive microwave are proportional to canopy water content. In this study, we propose to use variations in VOD as an indicator of potential tree mortality. Since VOD accounts for intrinsic water stress undergone by vegetation, it is expected to be more accurate than external climatic stress indicators. Analysis of tree mortality events in California, USA observed by airborne detection shows a consistent relationship between mortality and the proposed VOD metric. Although this approach is limited by the kilometer-scale resolution of passive microwave radiometry, our results nevertheless demonstrate that microwave-derived estimates of vegetation water content can be used to study drought-driven tree mortality, and may be a valuable tool for mortality predictions if they can be combined with higher-resolution variables.

Two-Dimensional Synthetic Aperture Radiometry over Land Surface During Soil Moisture Experiment in 2003 (SMEX03)

NASA Technical Reports Server (NTRS)

Ryu, Dongryeol; Jackson, Thomas J.; Bindlish, Rajat; Le Vine, David M.; Haken, Michael

2007-01-01

Microwave radiometry at low frequencies (L-band, approx. 1.4 GHz) has been known as an optimal solution for remote sensing of soil moisture. However, the antenna size required to achieve an appropriate resolution from space has limited the development of spaceborne L-band radiometers. This problem can be addressed by interferometric technology called aperture synthesis. The Soil Moisture and Ocean Salinity (SMOS) mission will apply this technique to monitor global-scale surface parameters in the near future. The first airborne experiment using an aircraft prototype of this approach, the Two-Dimensional Synthetic Aperture Radiometer (2D-STAR), was performed in the Soil Moisture Experiment in 2003 (SMEX03). The L-band brightness temperature data acquired in Alabama by the 2DSTAR was compared with ground-based measurements of soil moisture and with C-band data collected by the Polarimetric Scanning Radiometer (PSR). Our results demonstrate a good response of the 2D-STAR brightness temperature to changes in surface wetness, both in agricultural and forest lands. The behavior of the horizontally polarized brightness temperature data with increasing view-angle over the forest area was noticeably different than over bare soil. The results from the comparison of 2D-STAR and PSR indicate a better response of the 2D-STAR to the surface wetness under both wet and dry conditions. Our results have important implications for the performance of the future SMOS mission.

A First-Order Radiative Transfer Model for Microwave Radiometry of Forest Canopies at L-Band

NASA Technical Reports Server (NTRS)

Kurum, Mehmet; Lang, Roger H.; O'Neill, Peggy E.; Joseph, Alicia T.; Jackson, Thomas J.; Cosh, Michael H.

2011-01-01

In this study, a first-order radiative transfer (RT) model is developed to more accurately account for vegetation canopy scattering by modifying the basic Tau-Omega model (the zero-order RT solution). In order to optimally utilize microwave radiometric data in soil moisture (SM) retrievals over vegetated landscapes, a quantitative understanding of the relationship between scattering mechanisms within vegetation canopies and the microwave brightness temperature is desirable. The first-order RT model is used to investigate this relationship and to perform a physical analysis of the scattered and emitted radiation from vegetated terrain. This model is based on an iterative solution (successive orders of scattering) of the RT equations up to the first order. This formulation adds a new scattering term to the . model. The additional term represents emission by particles (vegetation components) in the vegetation layer and emission by the ground that is scattered once by particles in the layer. The model is tested against 1.4-GHz brightness temperature measurements acquired over deciduous trees by a truck-mounted microwave instrument system called ComRAD in 2007. The model predictions are in good agreement with the data, and they give quantitative understanding for the influence of first-order scattering within the canopy on the brightness temperature. The model results show that the scattering term is significant for trees and modifications are necessary to the . model when applied to dense vegetation. Numerical simulations also indicate that the scattering term has a negligible dependence on SM and is mainly a function of the incidence angle and polarization of the microwave observation. Index Terms Emission,microwave radiometry, scattering, soil, vegetation.

Fundamental electrode kinetics

NASA Technical Reports Server (NTRS)

Elder, J. P.

1968-01-01

Report presents the fundamentals of electrode kinetics and the methods used in evaluating the characteristic parameters of rapid-charge transfer processes at electrode-electrolyte interfaces. The concept of electrode kinetics is outlined, followed by the principles underlying the experimental techniques for the investigation of electrode kinetics.

The effect of tropospheric fluctuations on the accuracy of water vapor radiometry

NASA Technical Reports Server (NTRS)

Wilcox, J. Z.

1992-01-01

Line-of-sight path delay calibration accuracies of 1 mm are needed to improve both angular and Doppler tracking capabilities. Fluctuations in the refractivity of tropospheric water vapor limit the present accuracies to about 1 nrad for the angular position and to a delay rate of 3x10(exp -13) sec/sec over a 100-sec time interval for Doppler tracking. This article describes progress in evaluating the limitations of the technique of water vapor radiometry at the 1-mm level. The two effects evaluated here are: (1) errors arising from tip-curve calibration of WVR's in the presence of tropospheric fluctuations and (2) errors due to the use of nonzero beamwidths for water vapor radiometer (WVR) horns. The error caused by tropospheric water vapor fluctuations during instrument calibration from a single tip curve is 0.26 percent in the estimated gain for a tip-curve duration of several minutes or less. This gain error causes a 3-mm bias and a 1-mm scale factor error in the estimated path delay at a 10-deg elevation per 1 g/cm(sup 2) of zenith water vapor column density present in the troposphere during the astrometric observation. The error caused by WVR beam averaging of tropospheric fluctuations is 3 mm at a 10-deg elevation per 1 g/cm(sup 2) of zenith water vapor (and is proportionally higher for higher water vapor content) for current WVR beamwidths (full width at half maximum of approximately 6 deg). This is a stochastic error (which cannot be calibrated) and which can be reduced to about half of its instantaneous value by time averaging the radio signal over several minutes. The results presented here suggest two improvements to WVR design: first, the gain of the instruments should be stabilized to 4 parts in 10(exp 4) over a calibration period lasting 5 hours, and second, the WVR antenna beamwidth should be reduced to about 0.2 deg. This will reduce the error induced by water vapor fluctuations in the estimated path delays to less than 1 mm for the elevation range

Short-term nonmigrating tide variability in the mesosphere, thermosphere, and ionosphere

NASA Astrophysics Data System (ADS)

Pedatella, N. M.; Oberheide, J.; Sutton, E. K.; Liu, H.-L.; Anderson, J. L.; Raeder, K.

2016-04-01

The intraseasonal variability of the eastward propagating nonmigrating diurnal tide with zonal wave number 3 (DE3) during 2007 in the mesosphere, ionosphere, and thermosphere is investigated using a whole atmosphere model reanalysis and satellite observations. The atmospheric reanalysis is based on implementation of data assimilation in the Whole Atmosphere Community Climate Model (WACCM) using the Data Assimilation Research Testbed (DART) ensemble Kalman filter. The tidal variability in the WACCM+DART reanalysis is compared to the observed variability in the mesosphere and lower thermosphere (MLT) based on the Thermosphere Ionosphere Mesosphere Energetics Dynamics satellite Sounding of the Atmosphere using Broadband Emission Radiometry (TIMED/SABER) observations, in the ionosphere based on Constellation Observing System for Meteorology, Ionosphere, and Climate (COSMIC) observations, and in the upper thermosphere (˜475 km) based on Gravity Recovery and Climate Experiment (GRACE) neutral density observations. To obtain the short-term DE3 variability in the MLT and upper thermosphere, we apply the method of tidal deconvolution to the TIMED/SABER observations and consider the difference in the ascending and descending longitudinal wave number 4 structure in the GRACE observations. The results reveal that tidal amplitude changes of 5-10 K regularly occur on short timescales (˜10-20 days) in the MLT. Similar variability occurs in the WACCM+DART reanalysis and TIMED/SABER observations, demonstrating that the short-term variability can be captured in whole atmosphere models that employ data assimilation and in observations by the technique of tidal deconvolution. The impact of the short-term DE3 variability in the MLT on the ionosphere and thermosphere is also clearly evident in the COSMIC and GRACE observations. Analysis of the troposphere forcing in WACCM+DART and simulations of the Global Scale Wave Model (GSWM) show that the short-term DE3 variability in the MLT is

Kinetic Atom.

ERIC Educational Resources Information Center

Wilson, David B.

1981-01-01

Surveys the research of scientists like Joule, Kelvin, Maxwell, Clausius, and Boltzmann as it comments on the basic conceptual issues involved in the development of a more precise kinetic theory and the idea of a kinetic atom. (Author/SK)

Investigations of the middle atmospheric thermal structure and oscillations over sub-tropical regions in the Northern and Southern Hemispheres

NASA Astrophysics Data System (ADS)

Sharma, Som; Kumar, Prashant; Jethva, Chintan; Vaishnav, Rajesh; Bencherif, Hassan

2017-06-01

The temperature retrieved from the Sounding of the Atmosphere using Broadband Emission Radiometry (SABER) onboard Thermosphere Ionosphere Mesosphere Energetics and Dynamics (TIMED) satellite during January 2002 to September 2015 are used in this study to delineate the differences of middle atmospheric thermal structure in the Northern Hemisphere (NH) and Southern Hemisphere (SH). Two stations namely Mt. Abu (24.59°N, 72.70°E) in NH and Reunion Island (21.11°S, 55.53°E) in SH are chosen over sub-tropical regions. Temperature climatology from SABER observations suggests that stratopause is warmer, and upper mesosphere is cooler in NH as compared to SH. Three atmospheric models are used to understand the monthly thermal structure differences for different altitudes. Moreover, semi-annual, annual and quasi-biennial oscillations are studied using Lomb Scargle Periodogram and Wavelet transform techniques. Over NH, summer and winter season are warmer ( 4 K) and cooler ( 3 K) respectively in stratosphere as compared to SH. It is important to note here that Mt. Abu temperature is warmer ( 9 K) than Reunion Island in winter but in summer season Mt. Abu temperature is cooler in upper mesosphere and above mesosphere NH shows warming. Results show that annual oscillations are dominated in both hemisphere as compared to semi-annual and quasi-biennial oscillations. In upper mesosphere, strength of annual oscillations is substantial in NH, while semi-annual oscillations are stronger in SH. Wavelet analyses found that annual oscillations are significant in NH near mesopause, while semi-annual oscillations are strengthening in SH.

Stennis Space Center Verification and Validation Capabilities

NASA Technical Reports Server (NTRS)

O'Neal, Duane; Daehler, Erik

2006-01-01

Topics covered include: Spatial Response; Reflectance Radiometry; Positional Accuracy; Stationary Atmospheric Monitoring; Laboratory Calibration; Thermal Radiometry; Hyperspectral Radiometry; and Portable Atmospheric Monitoring.

Analyse du potentiel de la radiometrie infrarouge thermique pour la caracterisation des nuages de glace en Arctique

NASA Astrophysics Data System (ADS)

Blanchard, Yann

An important goal, within the context of improving climate change modelling, is to enhance our understanding of aerosols and their radiative effects (notably their indirect impact as cloud condensation nuclei). The cloud optical depth (COD) and average ice particle size of thin ice clouds (TICs) are two key parameters whose variations could strongly influence radiative effects and climate in the Arctic environment. Our objective was to assess the potential of using multi-band thermal radiance measurements of zenith sky radiance for retrieving COD and effective particle diameter (Deff) of TICs in the Arctic. We analyzed and quantified the sensitivity of thermal radiance on many parameters, such as COD, Deff, water vapor content, cloud bottom altitude and thickness, size distribution and shape. Using the sensitivity of IRT to COD and Deff, the developed retrieval technique is validated in comparison with retrievals from LIDAR and RADAR. Retrievals were applied to ground-based thermal infrared data acquired for 100 TICs at the high-Arctic PEARL observatory in Eureka, Nunavut, Canada and were validated using AHSRL LIDAR and MMCR RADAR data. The results of the retrieval method were used to successfully extract COD up to values of 3 and to separate TICs into two types : TIC1 characterized by small crystals (Deff < 30 mum) and TIC2 by large ice crystals (Deff > 30 mum, up to 300 mum). Inversions were performed across two polar winters. At the end of this research, we proposed different alternatives to apply our methodology in the Arctic. Keywords : Remote sensing ; ice clouds ; thermal infrared multi-band radiometry ; Arctic.

Chemical Kinetics Database

National Institute of Standards and Technology Data Gateway

SRD 17 NIST Chemical Kinetics Database (Web, free access)   The NIST Chemical Kinetics Database includes essentially all reported kinetics results for thermal gas-phase chemical reactions. The database is designed to be searched for kinetics data based on the specific reactants involved, for reactions resulting in specified products, for all the reactions of a particular species, or for various combinations of these. In addition, the bibliography can be searched by author name or combination of names. The database contains in excess of 38,000 separate reaction records for over 11,700 distinct reactant pairs. These data have been abstracted from over 12,000 papers with literature coverage through early 2000.

Photochemical modeling of nonmigrating tides in the 15 μm infrared cooling of the lower thermosphere over one solar cycle and comparison with SABER

NASA Astrophysics Data System (ADS)

Nischal, N.; Oberheide, J.; Mlynczak, M. G.; Hunt, L. A.; Maute, A. I.

2015-12-01

Tidal diagnostics of SABER CO2 15 μm data shows a substantial modulation of the energy budget of the lower thermosphere due to nonmigrating tides: relative amplitudes of the CO2 cooling rates for the DE2 and DE3 components are on the order of 15-50% with respect to the monthly mean emissions. Supporting photochemical tidal modeling using TIME-GCM and the empirical CTMT model reproduces the general amplitude structures and phases. Furthermore, it indicates that the main tidal coupling mechanism is the temperature dependence of the collisional excitation of the CO2 (01101) fundamental band transition (ν2). The response to neutral density variations is as important as temperature above 115 km as such explaining an unexpected tidal phase behavior in the observation. The contribution of vertical advection is comparatively small. In order to test the sensitivity of the modeled DE2 and DE3 CO2 VER tides to the solar cycle and to the specific choice of mean temperature, atomic oxygen, and CO2 density, we extend the modeling by using background from MSIS, SABER, and SCIAMACHY. The results indicate that the current uncertainties in the background temperature and atomic oxygen used for the photochemical modeling do not impact our conclusion about the relative importance of the tidal coupling mechanisms. Our results quantify the response of the CO2 15 μm infrared cooling of the lower thermosphere to tropospheric tides and delineate the coupling mechanisms that lead to the observed strong longitudinal and local time variability.

Evidence for Solar Cycle Influence on the Infrared Energy Budget and Radiative Cooling of the Thermosphere

NASA Technical Reports Server (NTRS)

Mlynczak, Martin G.; Martin-Torres, F. Javier; Marshall, B. Thomas; Thompson, R. Earl; Williams, Joshua; Turpin, TImothy; Kratz, D. P.; Russell, James M.; Woods, Tom; Gordley, Larry L.

2007-01-01

We present direct observational evidence for solar cycle influence on the infrared energy budget and radiative cooling of the thermosphere. By analyzing nearly five years of data from the Sounding of the Atmosphere using Broadband Emission Radiometry (SABER) instrument, we show that the annual mean infrared power radiated by the nitric oxide (NO) molecule at 5.3 m has decreased by a factor of 2.9. This decrease is correlated (r = 0.96) with the decrease in the annual mean F10.7 solar index. Despite the sharp decrease in radiated power (which is equivalent to a decrease in the vertical integrated radiative cooling rate), the variability of the power as given in the standard deviation of the annual means remains approximately constant. A simple relationship is shown to exist between the infrared power radiated by NO and the F10.7 index, thus providing a fundamental relationship between solar activity and the thermospheric cooling rate for use in thermospheric models. The change in NO radiated power is also consistent with changes in absorbed ultraviolet radiation over the same time period.

Development of a solid-state sodium Doppler lidar using an all-fiber-coupled injection seeding unit for simultaneous temperature and wind measurements in the mesopause region

NASA Astrophysics Data System (ADS)

Yang, Guotao; Xia, Yuan; Cheng, Xuewu; Du, Lifang; Wang, Jihong; Xun, Yuchang

2017-04-01

We present a solid-state sodium (Na) Doppler lidar developed at YanQing Station, Beijing, China (40°N, 116°E) to achieve simultaneous wind and temperature measurements of mesopause region. The 589nm pulse laser is produced by two injection seeded 1064nm and 1319nm Nd:YAG pulse lasers using the sum-frequency generation (SFG) technique. An all-fiber-coupled seeding laser unit was designed to enable absolute laser frequency locking and cycling the measurements among three different operating frequencies. Experimental observations were carried out using this Na lidar system and the preliminary results were described and compared with the temperature of the Sounding of the Atmosphere using Broadband Emission Radiometry (SABER) and the horizontal wind of the meteor Radar, demonstrating the reliability and good performance of this lidar system. The all-fiber-coupled injection seeding configuration together with the solid-state Nd:YAG lasers make the Na Doppler lidar more compact and greatly reduce the system maintenance, which is conducive to transportable and unattended operation.

El Niño-Southern Oscillation effect on quasi-biennial oscillations of temperature diurnal tides in the mesosphere and lower thermosphere

NASA Astrophysics Data System (ADS)

Sun, Yang-Yi; Liu, Huixin; Miyoshi, Yasunobu; Liu, Libo; Chang, Loren C.

2018-05-01

In this study, we evaluate the El Niño-Southern Oscillation (ENSO) signals in the two dominant temperature diurnal tides, diurnal westward wavenumber 1 (DW1) and diurnal eastward wavenumber 3 (DE3) on the quasi-biennial oscillation (QBO) scale (18-34 months) from 50 to 100 km altitudes. The tides are derived from the 21-year (January 1996-February 2017) Ground-to-Topside model of Atmosphere and Ionosphere for Aeronomy (GAIA) temperature simulations and 15-year (February 2002-February 2017) Thermosphere Ionosphere Mesosphere Energetics and Dynamics (TIMED)/Sounding of the Atmosphere using Broadband Emission Radiometry (SABER) temperature observations. The results show that ENSO warm phases shorten the period ( 2 years) of the QBO in DW1 amplitude near the equator and DE3 amplitude at low latitudes of the Northern Hemisphere. In contrast, the QBO period lengthens ( 2.5 years) during the ENSO neutral and cold phases. Correlation analysis shows the long-lasting effect of ENSO on the tidal QBO in the mesosphere and lower thermosphere.[Figure not available: see fulltext.

A kinetic equation with kinetic entropy functions for scalar conservation laws

NASA Technical Reports Server (NTRS)

Perthame, Benoit; Tadmor, Eitan

1990-01-01

A nonlinear kinetic equation is constructed and proved to be well-adapted to describe general multidimensional scalar conservation laws. In particular, it is proved to be well-posed uniformly in epsilon - the microscopic scale. It is also shown that the proposed kinetic equation is equipped with a family of kinetic entropy functions - analogous to Boltzmann's microscopic H-function, such that they recover Krushkov-type entropy inequality on the macroscopic scale. Finally, it is proved by both - BV compactness arguments in the one-dimensional case, that the local density of kinetic particles admits a continuum limit, as it converges strongly with epsilon below 0 to the unique entropy solution of the corresponding conservation law.

The variability of SE2 tide extracted from TIMED/SABER observations

NASA Astrophysics Data System (ADS)

Li, X.; Wan, W.; Ren, Z.

2017-12-01

Based on the temperature observations of the TIMED/SABER in mesosphere/lower thermosphere region (70-110 km altitudes) and at the low latitude and midlatitude (45°S-45°N) from 2002 to 2012, the variability of the nonmigrating tide SE2 with 1 day resolution is analyzed. It is found that the climatological features (large-scale variability) of the semidiurnal nonmigrating tide with zonal wave number 2 (SE2) tide are similar with the results from the previous research works. The SE2 tide manifests mainly at the low-mid latitudes around ±30°. The northern hemisphere tidal amplitudes below 110 km are larger than the southern hemisphere tide. SE2 peaks below 110 km mainly present between 100 and 110 km altitude. The tidal amplitudes below 110 km occur a north-south asymmetry about the equator in the annual variation: in the southern hemisphere, SE2 occurs with an obvious annual variation with a maximum of tidal amplitudes in December, while in the northern one, the semiannual variations with maximum at the equinoxes. Herein, owing to the high-resolution tidal data, we could research the short-term (day-to-day) variations of SE2. We found that the day-to-day variations manifest mainly at between 100 and 110 km altitudes; it increases gradually with latitudes, and it is stronger at the low-mid latitudes; it is relatively slightly stronger around solstices than equinoxes; and it does not present a remarkably interannual variation. The SE2 day-to-day variations may be composed by the absolute amplitudes' variance and the impact of the wave phases, and the latter ones are more important.

Non-Isothermal Kinetics.

ERIC Educational Resources Information Center

Brown, M. E.; Phillpotts, C. A. R.

1978-01-01

Discusses the principle of nonisothermal kinetics and some of the factors involved in such reactions, especially when considering the reliability of the kinetic parameters, compared to those of isothermal conditions. (GA)

Using a Novel Absolute Ontogenetic Age Determination Technique to Calculate the Timing of Tooth Eruption in the Saber-Toothed Cat, Smilodon fatalis.

PubMed

Wysocki, M Aleksander; Feranec, Robert S; Tseng, Zhijie Jack; Bjornsson, Christopher S

2015-01-01

Despite the superb fossil record of the saber-toothed cat, Smilodon fatalis, ontogenetic age determination for this and other ancient species remains a challenge. The present study utilizes a new technique, a combination of data from stable oxygen isotope analyses and micro-computed tomography, to establish the eruption rate for the permanent upper canines in Smilodon fatalis. The results imply an eruption rate of 6.0 millimeters per month, which is similar to a previously published average enamel growth rate of the S. fatalis upper canines (5.8 millimeters per month). Utilizing the upper canine growth rate, the upper canine eruption rate, and a previously published tooth replacement sequence, this study calculates absolute ontogenetic age ranges of tooth development and eruption in S. fatalis. The timing of tooth eruption is compared between S. fatalis and several extant conical-toothed felids, such as the African lion (Panthera leo). Results suggest that the permanent dentition of S. fatalis, except for the upper canines, was fully erupted by 14 to 22 months, and that the upper canines finished erupting at about 34 to 41 months. Based on these developmental age calculations, S. fatalis individuals less than 4 to 7 months of age were not typically preserved at Rancho La Brea. On the whole, S. fatalis appears to have had delayed dental development compared to dental development in similar-sized extant felids. This technique for absolute ontogenetic age determination can be replicated in other ancient species, including non-saber-toothed taxa, as long as the timing of growth initiation and growth rate can be determined for a specific feature, such as a tooth, and that growth period overlaps with the development of the other features under investigation.

Ionospheric E-Region Response to Solar-Geomagnetic Storms Observed by TIMED/SABER and Application to IRI Storm-Model Development

NASA Technical Reports Server (NTRS)

Mertens, Christopher J.; Mast, Jeffrey C.; Winick, Jeremy R.; Russell, James M., III; Mlynczak, Martin G.; Evans, David S.

2007-01-01

The large thermospheric infrared radiance enhancements observed from the TIMED/SABER experiment during recent solar storms provide an exciting opportunity to study the influence of solar-geomagnetic disturbances on the upper atmosphere and ionosphere. In particular, nighttime enhancements of 4.3 um emission, due to vibrational excitation and radiative emission by NO+, provide an excellent proxy to study and analyze the response of the ionospheric E-region to auroral electron dosing and storm-time enhancements to the E-region electron density. In this paper we give a status report of on-going work on model and data analysis methodologies of deriving NO+ 4.3 um volume emission rates, a proxy for the storm-time E-region response, and the approach for deriving an empirical storm-time correction to International Reference Ionosphere (IRI) E-region NO+ and electron densities.

A prospectus on kinetic heliophysics

NASA Astrophysics Data System (ADS)

Howes, Gregory G.

2017-05-01

Under the low density and high temperature conditions typical of heliospheric plasmas, the macroscopic evolution of the heliosphere is strongly affected by the kinetic plasma physics governing fundamental microphysical mechanisms. Kinetic turbulence, collisionless magnetic reconnection, particle acceleration, and kinetic instabilities are four poorly understood, grand-challenge problems that lie at the new frontier of kinetic heliophysics. The increasing availability of high cadence and high phase-space resolution measurements of particle velocity distributions by current and upcoming spacecraft missions and of massively parallel nonlinear kinetic simulations of weakly collisional heliospheric plasmas provides the opportunity to transform our understanding of these kinetic mechanisms through the full utilization of the information contained in the particle velocity distributions. Several major considerations for future investigations of kinetic heliophysics are examined. Turbulent dissipation followed by particle heating is highlighted as an inherently two-step process in weakly collisional plasmas, distinct from the more familiar case in fluid theory. Concerted efforts must be made to tackle the big-data challenge of visualizing the high-dimensional (3D-3V) phase space of kinetic plasma theory through physics-based reductions. Furthermore, the development of innovative analysis methods that utilize full velocity-space measurements, such as the field-particle correlation technique, will enable us to gain deeper insight into these four grand-challenge problems of kinetic heliophysics. A systems approach to tackle the multi-scale problem of heliophysics through a rigorous connection between the kinetic physics at microscales and the self-consistent evolution of the heliosphere at macroscales will propel the field of kinetic heliophysics into the future.

A prospectus on kinetic heliophysics

PubMed Central

2017-01-01

Under the low density and high temperature conditions typical of heliospheric plasmas, the macroscopic evolution of the heliosphere is strongly affected by the kinetic plasma physics governing fundamental microphysical mechanisms. Kinetic turbulence, collisionless magnetic reconnection, particle acceleration, and kinetic instabilities are four poorly understood, grand-challenge problems that lie at the new frontier of kinetic heliophysics. The increasing availability of high cadence and high phase-space resolution measurements of particle velocity distributions by current and upcoming spacecraft missions and of massively parallel nonlinear kinetic simulations of weakly collisional heliospheric plasmas provides the opportunity to transform our understanding of these kinetic mechanisms through the full utilization of the information contained in the particle velocity distributions. Several major considerations for future investigations of kinetic heliophysics are examined. Turbulent dissipation followed by particle heating is highlighted as an inherently two-step process in weakly collisional plasmas, distinct from the more familiar case in fluid theory. Concerted efforts must be made to tackle the big-data challenge of visualizing the high-dimensional (3D-3V) phase space of kinetic plasma theory through physics-based reductions. Furthermore, the development of innovative analysis methods that utilize full velocity-space measurements, such as the field-particle correlation technique, will enable us to gain deeper insight into these four grand-challenge problems of kinetic heliophysics. A systems approach to tackle the multi-scale problem of heliophysics through a rigorous connection between the kinetic physics at microscales and the self-consistent evolution of the heliosphere at macroscales will propel the field of kinetic heliophysics into the future. PMID:29104421

Nonmigrating tidal impact on the CO2 15 μm infrared cooling of the lower thermosphere during solar minimum conditions

NASA Astrophysics Data System (ADS)

Nischal, N.; Oberheide, J.; Mlynczak, M. G.; Hunt, L. A.; Maute, A.

2017-06-01

Carbon dioxide (CO2) infrared emissions at 15 μm is the primary radiative cooling mechanism of the thermosphere in the altitude range of 100-135 km. This paper explores the role of two important diurnal nonmigrating tides, the DE2 and DE3, in the modulation of CO2 15 μm emissions during the solar minimum year 2008 by (i) analyzing Sounding the Atmosphere using Broadband Emission Radiometry (SABER) CO2 cooling rate data and (ii) photochemical modeling using dynamical tides from the empirical Climatological Tidal Model of the Thermosphere model. Tidal diagnostics of SABER data shows that the CO2 cooling rate amplitudes for the DE2 and DE3 components are on the order of approximately 20-50% relative to the monthly means, and they maximize around the lower bound (100 km) of the analyzed height interval. The photochemical modeling reproduces the observed results, albeit with systematic amplitude differences which is likely related to the uncertainty in the model input backgrounds, especially atomic oxygen. The main tidal coupling mechanism is found to be the temperature dependence of the collisional excitation of the CO2 ν2 vibrational state. However, neutral density becomes equally important above ˜110 km, thereby explaining observed evanescent DE2 and DE3 phases which are not present in temperature tides. The contribution of vertical tidal advection is comparatively small. The relative importance of the coupling mechanisms is the same at all latitudes/seasons. These results indicate that upward propagating nonmigrating tides forced by latent heat release in the lower atmosphere impact the thermospheric energy budget by modulating the longitudinal/local time behavior of the CO2 infrared cooling.

On the wave number 2 eastward propagating quasi 2 day wave at middle and high latitudes

NASA Astrophysics Data System (ADS)

Gu, Sheng-Yang; Liu, Han-Li; Pedatella, N. M.; Dou, Xiankang; Liu, Yu

2017-04-01

The temperature and wind data sets from the ensemble data assimilation version of the Whole Atmosphere Community Climate Model + Data Assimilation Research Testbed (WACCM + DART) developed at the National Center for Atmospheric Research (NCAR) are utilized to study the seasonal variability of the eastward quasi 2 day wave (QTDW) with zonal wave number 2 (E2) during 2007. The aliasing ratio of E2 from wave number 3 (W3) in the synoptic WACCM data set is a constant value of 4 × 10-6% due to its uniform sampling pattern, whereas the aliasing is latitudinally dependent if the WACCM fields are sampled asynoptically based on the Sounding of the Atmosphere using Broadband Emission Radiometry (SABER) sampling. The aliasing ratio based on SABER sampling is 75% at 40°S during late January, where and when W3 peaks. The analysis of the synoptic WACCM data set shows that the E2 is in fact a winter phenomenon, which peaks in the stratosphere and lower mesosphere at high latitudes. In the austral winter period, the amplitudes of E2 can reach 10 K, 20 m/s, and 30 m/s for temperature, zonal, and meridional winds, respectively. In the boreal winter period, the wave perturbations are only one third as strong as those in austral winter. Diagnostic analysis also shows that the mean flow instabilities in the winter upper mesosphere polar region provide sources for the amplification of E2. This is different from the westward QTDWs, whose amplifications are related to the summer easterly jet. In addition, the E2 also peaks at lower altitude than the westward modes.

Evidence of nonlinear interaction between quasi 2 day wave and quasi-stationary wave

NASA Astrophysics Data System (ADS)

Gu, Sheng-Yang; Liu, Han-Li; Li, Tao; Dou, Xiankang; Wu, Qian; Russell, James M.

2015-02-01

The nonlinear interaction between the westward quasi 2 day wave (QTDW) with zonal wave number s = 3 (W3) and stationary planetary wave with s = 1 (SPW1) is first investigated using both Thermosphere, Ionosphere, and Mesosphere Electric Dynamics (TIMED) satellite observations and the thermosphere-ionosphere-mesosphere electrodynamics general circulation model (TIME-GCM) simulations. A QTDW with westward s = 2 (W2) is identified in the mesosphere and lower thermosphere (MLT) region in TIMED/Sounding of the Atmosphere using Broadband Emission Radiometry (SABER) temperature and TIMED/TIMED Doppler Imager (TIDI) wind observations during 2011/2012 austral summer period, which coincides with a strong SPW1 episode at high latitude of the northern winter hemisphere. The temperature perturbation of W2 QTDW reaches a maximum amplitude of ~8 K at ~30°S and ~88 km in the Southern Hemisphere, with a smaller amplitude in the Northern Hemisphere at similar latitude and minimum amplitude at the equator. The maximum meridional wind amplitude of the W2 QTDW is observed to be ~40 m/s at 95 km in the equatorial region. The TIME-GCM is utilized to simulate the nonlinear interactions between W3 QTDW and SPW1 by specifying both W3 QTDW and SPW1 perturbations at the lower model boundary. The model results show a clear W2 QTDW signature in the MLT region, which agrees well with the TIMED/SABER temperature and TIMED/TIDI horizontal wind observations. We conclude that the W2 QTDW during the 2011/2012 austral summer period results from the nonlinear interaction between W3 QTDW and SPW1.

Kinetics of Methylmercury Production Revisited

DOE PAGES

Olsen, Todd A.; Muller, Katherine A.; Painter, Scott L.; ...

2018-01-27

Laboratory measurements of the biologically mediated methylation of mercury (Hg) to the neurotoxin monomethylmercury (MMHg) often exhibit kinetics that are inconsistent with first-order kinetic models. Using time-resolved measurements of filter passing Hg and MMHg during methylation/demethylation assays, a multisite kinetic sorption model, and reanalyses of previous assays, we show in this paper that competing kinetic sorption reactions can lead to time-varying availability and apparent non-first-order kinetics in Hg methylation and MMHg demethylation. The new model employing a multisite kinetic sorption model for Hg and MMHg can describe the range of behaviors for time-resolved methylation/demethylation data reported in the literature includingmore » those that exhibit non-first-order kinetics. Additionally, we show that neglecting competing sorption processes can confound analyses of methylation/demethylation assays, resulting in rate constant estimates that are systematically biased low. Finally, simulations of MMHg production and transport in a hypothetical periphyton biofilm bed illustrate the implications of our new model and demonstrate that methylmercury production may be significantly different than projected by single-rate first-order models.« less

Different enzyme kinetic models.

PubMed

Seibert, Eleanore; Tracy, Timothy S

2014-01-01

As described in Chapter 2 , a large number of enzymatic reactions can be adequately described by Michaelis-Menten kinetics. The Michaelis-Menten equation represents a rectangular hyperbola, with a y-asymptote at the V max value. In many cases, more complex kinetic models are required to explain the observed data. Atypical kinetic profiles are believed to arise from the simultaneous binding of multiple molecules within the active site of the enzyme (Tracy and Hummel, Drug Metab Rev 36:231-242, 2004). Several cytochromes P450 have large active sites that enable binding of multiple molecules (Wester et al. J Biol Chem 279:35630-35637, 2004; Yano et al. J Biol Chem 279:38091-38094, 2004). Thus, atypical kinetics are not uncommon in in vitro drug metabolism studies. This chapter covers enzyme kinetic reactions in which a single enzyme has multiple binding sites for substrates and/or inhibitors as well as reactions catalyzed by multiple enzymes.

Interhemispheric Asymmetry in the Mesosphere and Lower Thermosphere Observed by SABER/TIMED

NASA Astrophysics Data System (ADS)

Yee, J. H.

2017-12-01

In this paper we analyze nearly 15 years of satellite observations of temperature, airglow, and composition in the Mesosphere and Lower Thermosphere (MLT) to quantify their interhemispheric asymmetries ao one can provide quantitative links between observed asymmetries and the spatial and temporal variations of the gravity wave activity. Two processes are believed to be responsible for observed interhemispheric differences in the MLT. The first is the direct radiation effect from the eccentricity of the Earth orbit amd the other is the difference in gravity wave source distribution and filtering due to asymmetries in mean winds of the lower atmosphere. Both processes have been theoretically investigated to explain the observed asymmetry in some of the atmospheric parameters, but not self-consistently in all observed parameters together. In this paper we will show the asymmetry in the time-varying zonal-mean latitudinal structures of temperature, airglow emission rate, and composition observed by TIMED/SABER. We will quantify their interhemispheric asymmetries for different seasons under different solar activity conditions. In addition, temperature measurements will also be used to obtain temporal and spatial morphology of gravity wave potential energies. We will interpret the asymmetry in the observed fields and examine qualitatively their consistency with the two responsible processes, especially the one due to gravity wave filtering process. Our goal is to introduce and to share the spatial and temporal morphologies of all the observed fields to the modeling community so, together self-consistently, they be can be used to gain physical insights into the relative importance of various drivers responsible for the observed asymmetry, especially the role of gravity wave induced eddy drag and mixing, a critical, but least quantitatively understood process.

Measurement of Low Amounts of Precipitable Water Vapor Using Ground-Based Millimeterwave Radiometry

NASA Technical Reports Server (NTRS)

Racette, Paul E.; Westwater, Ed R.; Han, Yong; Gasiewski, Albin J.; Klein, Marian; Cimini, Domenico; Jones, David C.; Manning, WIll; Kim, Edward J.; Wang, James R.

2003-01-01

Extremely dry conditions characterized by amounts of precipitable water vapor (PWV) as as 1-2 mm commonly occur in high-latitude regions during the winter months. While such atmospheres carry only a few percent of the latent heat energy compared to tropical atmospheres, the effects of low vapor amounts on the polar radiation budget - both directly through modulation of longwave radiation and indirectly through the formation of clouds - are considerable. Accurate measurements of precipitable water vapor (PWV) during such dry conditions are needed to improve polar radiation models for use in understanding and predicting change in the climatically sensitive polar regions. To this end, the strong water vapor absorption at 183.310 GHz provides a unique means of measuring low amounts of PWV. Weighting function analysis, forward model calculations based upon a 7-year radiosonde dataset, and retrieval simulations consistently predict that radiometric measurements made using several millimeter-wavelength (MMW) channels near the 183 GHz line, together with established microwave (MW) measurements at the 22.235 GHz water vapor line and -3 1 GHz atmospheric absorption window can be used to determine within 5% uncertainty the full range of PWV expected in the Arctic. This unique collective capability stands in spite of accuracy limitations stemming from uncertainties due to the sensitivity of the vertical distribution of temperature and water vapor at MMW channels. In this study the potential of MMW radiometry using the 183 GHz line for measuring low amounts of PWV is demonstrated both theoretically and experimentally. The study uses data obtained during March 1999 as part of an experiment conducted at the Department of Energy s Cloud and Radiation Testbed (CART) near Barrow, Alaska. Several radiometers from both NOAA and NASA were deployed during the experiment to provide the first combined MMW and MW ground-based data set during dry arctic conditions. Single-channel retrievals

An Introductory Level Kinetics Investigation.

ERIC Educational Resources Information Center

McGarvey, J. E. B.; Knipe, A. C.

1980-01-01

Provides a list of the reactions commonly used for introductory kinetics studies. These reactions illustrate the kinetics concepts of rate law, rate constant, and reaction order. Describes a kinetic study of the hydrolysis of 3-bromo-3-phenylpropanoic acid which offers many educational advantages. (CS)

Coherent systems in the terahertz frequency range: Elements, operation, and examples

NASA Technical Reports Server (NTRS)

Goldsmith, Paul F.

1992-01-01

The topics are presented in viewgraph form and include the following: terahertz coherent systems applications; a brief overview of selected components; radiometry and spectroscopy--astronomy; radiometry--aircraft all weather landing system; radiometry--atmospheric remote sensing; plasma diagnostics; communications; radar systems; and materials measurement and manufacturing process control.

First results from ground-based CO2 remote sounding using high-resolution thermal IR laser heterodyne radiometry

NASA Astrophysics Data System (ADS)

Hoffmann, Alex; Huebner, Marko; Macleod, Neil; Weidmann, Damien

2016-04-01

Over the course of the last decade, the Laser Spectroscopy Group at RAL Space has considerably furthered the passive remote sensing technique of thermal IR Laser Heterodyne Radiometry (LHR), and applied it successfully to the ground-based sounding of atmospheric profiles of a variety of trace gases, including methane. LHR is underpinned by coherent detection technology and ideally shot noise-limited, which can significantly enhance the signal-to-noise ratio of acquired atmospheric spectra over conventional direct detection spectrometers when high spectral (>500,000 resolving power) and high spatial resolutions are needed. These benefits allow probing optimized narrow spectral windows (1 cm-1) with full absorption lineshape information, useful for trace gas vertical profiling. Furthermore, LHR has a high potential for miniaturization into a rugged, unprecedentedly compact package, through hollow waveguide optical integration, facilitating its deployment in ground-based observation networks, as well as on a variety of airborne and spaceborne platforms, whilst retaining its high specifications. This makes LHR well-suited to the remote sounding of key greenhouse gases, in particular carbon dioxide, as observations with high precision and accuracy are crucial to discriminate trends and small variations over a substantial background concentration, and in order to contribute to flux estimations in top-down carbon cycle inversion approaches and anthropogenic emission monitoring. Here, we present a new optical bench-based LHR prototype that has been specifically built to demonstrate CO2 sounding in the thermal IR. The instrument has been coupled to a new permanently installed solar tracker to take a long-term measurement series in solar occultation mode, and to assess the performance of the instrument. We discuss its theoretical performance modelled using an Observation System Simulator, and showcase first results from a 6 months' archive, with observations undergoing

In vivo characterization of structural and optical properties of human skin by combined photothermal radiometry and diffuse reflectance spectroscopy

NASA Astrophysics Data System (ADS)

Verdel, Nina; Marin, Ana; Vidovič, Luka; Milanič, Matija; Majaron, Boris

2017-02-01

We have combined two optical techniques to enable simultaneous assessment of structure and composition of human skin in vivo: Pulsed photothermal radiometry (PPTR), which involves measurements of transient dynamics in midinfrared emission from sample surface after exposure to a light pulse, and diffuse reflectance spectroscopy (DRS) in visible part of the spectrum. Namely, while PPTR is highly sensitive to depth distribution of selected absorbers, DRS provides spectral information and thus enables differentiation between various chromophores. The accuracy and robustness of the inverse analysis is thus considerably improved compared to use of either technique on its own. Our analysis approach is simultaneous multi-dimensional fitting of the measured PPTR signals and DRS with predictions from a numerical model of light-tissue interaction (a.k.a. inverse Monte Carlo). By using a three-layer skin model (epidermis, dermis, and subcutis), we obtain a good match between the experimental and modeling data. However, dividing the dermis into two separate layers (i.e., papillary and reticular dermis) helps to bring all assessed parameter values within anatomically and physiologically plausible intervals. Both the quality of the fit and the assessed parameter values depend somewhat on the assumed scattering properties for skin, which vary in literature and likely depend on subject's age and gender, anatomical site, etc. In our preliminary experience, simultaneous fitting of the scattering properties is possible and leads to considerable improvement of the fit. The described approach may thus have a potential for simultaneous determination of absorption and scattering properties of human skin in vivo.

Accurate determination of electronic transport properties of silicon wafers by nonlinear photocarrier radiometry with multiple pump beam sizes

DOE Office of Scientific and Technical Information (OSTI.GOV)

Wang, Qian; University of the Chinese Academy of Sciences, Beijing 100039; Li, Bincheng, E-mail: bcli@uestc.ac.cn

2015-12-07

In this paper, photocarrier radiometry (PCR) technique with multiple pump beam sizes is employed to determine simultaneously the electronic transport parameters (the carrier lifetime, the carrier diffusion coefficient, and the front surface recombination velocity) of silicon wafers. By employing the multiple pump beam sizes, the influence of instrumental frequency response on the multi-parameter estimation is totally eliminated. A nonlinear PCR model is developed to interpret the PCR signal. Theoretical simulations are performed to investigate the uncertainties of the estimated parameter values by investigating the dependence of a mean square variance on the corresponding transport parameters and compared to that obtainedmore » by the conventional frequency-scan method, in which only the frequency dependences of the PCR amplitude and phase are recorded at single pump beam size. Simulation results show that the proposed multiple-pump-beam-size method can improve significantly the accuracy of the determination of the electronic transport parameters. Comparative experiments with a p-type silicon wafer with resistivity 0.1–0.2 Ω·cm are performed, and the electronic transport properties are determined simultaneously. The estimated uncertainties of the carrier lifetime, diffusion coefficient, and front surface recombination velocity are approximately ±10.7%, ±8.6%, and ±35.4% by the proposed multiple-pump-beam-size method, which is much improved than ±15.9%, ±29.1%, and >±50% by the conventional frequency-scan method. The transport parameters determined by the proposed multiple-pump-beam-size PCR method are in good agreement with that obtained by a steady-state PCR imaging technique.« less

Numerical 3D modeling of heat transfer in human tissues for microwave radiometry monitoring of brown fat metabolism

NASA Astrophysics Data System (ADS)

Rodrigues, Dario B.; Maccarini, Paolo F.; Salahi, Sara; Colebeck, Erin; Topsakal, Erdem; Pereira, Pedro J. S.; Limão-Vieira, Paulo; Stauffer, Paul R.

2013-02-01

Background: Brown adipose tissue (BAT) plays an important role in whole body metabolism and could potentially mediate weight gain and insulin sensitivity. Although some imaging techniques allow BAT detection, there are currently no viable methods for continuous acquisition of BAT energy expenditure. We present a non-invasive technique for long term monitoring of BAT metabolism using microwave radiometry. Methods: A multilayer 3D computational model was created in HFSSTM with 1.5 mm skin, 3-10 mm subcutaneous fat, 200 mm muscle and a BAT region (2-6 cm3) located between fat and muscle. Based on this model, a log-spiral antenna was designed and optimized to maximize reception of thermal emissions from the target (BAT). The power absorption patterns calculated in HFSSTM were combined with simulated thermal distributions computed in COMSOL® to predict radiometric signal measured from an ultra-low-noise microwave radiometer. The power received by the antenna was characterized as a function of different levels of BAT metabolism under cold and noradrenergic stimulation. Results: The optimized frequency band was 1.5-2.2 GHz, with averaged antenna efficiency of 19%. The simulated power received by the radiometric antenna increased 2-9 mdBm (noradrenergic stimulus) and 4-15 mdBm (cold stimulus) corresponding to increased 15-fold BAT metabolism. Conclusions: Results demonstrated the ability to detect thermal radiation from small volumes (2-6 cm3) of BAT located up to 12 mm deep and to monitor small changes (0.5 °C) in BAT metabolism. As such, the developed miniature radiometric antenna sensor appears suitable for non-invasive long term monitoring of BAT metabolism.

Numerical 3D modeling of heat transfer in human tissues for microwave radiometry monitoring of brown fat metabolism

PubMed Central

Rodrigues, Dario B.; Maccarini, Paolo F.; Salahi, Sara; Colebeck, Erin; Topsakal, Erdem; Pereira, Pedro J. S.; Limão-Vieira, Paulo; Stauffer, Paul R.

2013-01-01

Background Brown adipose tissue (BAT) plays an important role in whole body metabolism and could potentially mediate weight gain and insulin sensitivity. Although some imaging techniques allow BAT detection, there are currently no viable methods for continuous acquisition of BAT energy expenditure. We present a non-invasive technique for long term monitoring of BAT metabolism using microwave radiometry. Methods A multilayer 3D computational model was created in HFSS™ with 1.5 mm skin, 3–10 mm subcutaneous fat, 200 mm muscle and a BAT region (2–6 cm3) located between fat and muscle. Based on this model, a log-spiral antenna was designed and optimized to maximize reception of thermal emissions from the target (BAT). The power absorption patterns calculated in HFSS™ were combined with simulated thermal distributions computed in COMSOL® to predict radiometric signal measured from an ultra-low-noise microwave radiometer. The power received by the antenna was characterized as a function of different levels of BAT metabolism under cold and noradrenergic stimulation. Results The optimized frequency band was 1.5–2.2 GHz, with averaged antenna efficiency of 19%. The simulated power received by the radiometric antenna increased 2–9 mdBm (noradrenergic stimulus) and 4–15 mdBm (cold stimulus) corresponding to increased 15-fold BAT metabolism. Conclusions Results demonstrated the ability to detect thermal radiation from small volumes (2–6 cm3) of BAT located up to 12 mm deep and to monitor small changes (0.5 °C) in BAT metabolism. As such, the developed miniature radiometric antenna sensor appears suitable for non-invasive long term monitoring of BAT metabolism. PMID:24244831

Numerical 3D modeling of heat transfer in human tissues for microwave radiometry monitoring of brown fat metabolism.

PubMed

Rodrigues, Dario B; Maccarini, Paolo F; Salahi, Sara; Colebeck, Erin; Topsakal, Erdem; Pereira, Pedro J S; Limão-Vieira, Paulo; Stauffer, Paul R

2013-02-26

Brown adipose tissue (BAT) plays an important role in whole body metabolism and could potentially mediate weight gain and insulin sensitivity. Although some imaging techniques allow BAT detection, there are currently no viable methods for continuous acquisition of BAT energy expenditure. We present a non-invasive technique for long term monitoring of BAT metabolism using microwave radiometry. A multilayer 3D computational model was created in HFSS™ with 1.5 mm skin, 3-10 mm subcutaneous fat, 200 mm muscle and a BAT region (2-6 cm 3 ) located between fat and muscle. Based on this model, a log-spiral antenna was designed and optimized to maximize reception of thermal emissions from the target (BAT). The power absorption patterns calculated in HFSS™ were combined with simulated thermal distributions computed in COMSOL® to predict radiometric signal measured from an ultra-low-noise microwave radiometer. The power received by the antenna was characterized as a function of different levels of BAT metabolism under cold and noradrenergic stimulation. The optimized frequency band was 1.5-2.2 GHz, with averaged antenna efficiency of 19%. The simulated power received by the radiometric antenna increased 2-9 mdBm (noradrenergic stimulus) and 4-15 mdBm (cold stimulus) corresponding to increased 15-fold BAT metabolism. Results demonstrated the ability to detect thermal radiation from small volumes (2-6 cm 3 ) of BAT located up to 12 mm deep and to monitor small changes (0.5 °C) in BAT metabolism. As such, the developed miniature radiometric antenna sensor appears suitable for non-invasive long term monitoring of BAT metabolism.

Fractal reaction kinetics.

PubMed

Kopelman, R

1988-09-23

Classical reaction kinetics has been found to be unsatisfactory when the reactants are spatially constrained on the microscopic level by either walls, phase boundaries, or force fields. Recently discovered theories of heterogeneous reaction kinetics have dramatic consequences, such as fractal orders for elementary reactions, self-ordering and self-unmixing of reactants, and rate coefficients with temporal "memories." The new theories were needed to explain the results of experiments and supercomputer simulations of reactions that were confined to low dimensions or fractal dimensions or both. Among the practical examples of "fractal-like kinetics" are chemical reactions in pores of membranes, excitation trapping in molecular aggregates, exciton fusion in composite materials, and charge recombination in colloids and clouds.

Optoelectronic transport properties in amorphous/crystalline silicon solar cell heterojunctions measured by frequency-domain photocarrier radiometry: multi-parameter measurement reliability and precision studies.

PubMed

Zhang, Y; Melnikov, A; Mandelis, A; Halliop, B; Kherani, N P; Zhu, R

2015-03-01

A theoretical one-dimensional two-layer linear photocarrier radiometry (PCR) model including the presence of effective interface carrier traps was used to evaluate the transport parameters of p-type hydrogenated amorphous silicon (a-Si:H) and n-type crystalline silicon (c-Si) passivated by an intrinsic hydrogenated amorphous silicon (i-layer) nanolayer. Several crystalline Si heterojunction structures were examined to investigate the influence of the i-layer thickness and the doping concentration of the a-Si:H layer. The experimental data of a series of heterojunction structures with intrinsic thin layers were fitted to PCR theory to gain insight into the transport properties of these devices. The quantitative multi-parameter results were studied with regard to measurement reliability (uniqueness) and precision using two independent computational best-fit programs. The considerable influence on the transport properties of the entire structure of two key parameters that can limit the performance of amorphous thin film solar cells, namely, the doping concentration of the a-Si:H layer and the i-layer thickness was demonstrated. It was shown that PCR can be applied to the non-destructive characterization of a-Si:H/c-Si heterojunction solar cells yielding reliable measurements of the key parameters.

Optoelectronic transport properties in amorphous/crystalline silicon solar cell heterojunctions measured by frequency-domain photocarrier radiometry: Multi-parameter measurement reliability and precision studies

DOE Office of Scientific and Technical Information (OSTI.GOV)

Zhang, Y.; Institute of Electronic Engineering and Optoelectronic Technology, Nanjing University of Science and Technology, Nanjing, Jiangsu 210094; Melnikov, A.

2015-03-15

A theoretical one-dimensional two-layer linear photocarrier radiometry (PCR) model including the presence of effective interface carrier traps was used to evaluate the transport parameters of p-type hydrogenated amorphous silicon (a-Si:H) and n-type crystalline silicon (c-Si) passivated by an intrinsic hydrogenated amorphous silicon (i-layer) nanolayer. Several crystalline Si heterojunction structures were examined to investigate the influence of the i-layer thickness and the doping concentration of the a-Si:H layer. The experimental data of a series of heterojunction structures with intrinsic thin layers were fitted to PCR theory to gain insight into the transport properties of these devices. The quantitative multi-parameter results weremore » studied with regard to measurement reliability (uniqueness) and precision using two independent computational best-fit programs. The considerable influence on the transport properties of the entire structure of two key parameters that can limit the performance of amorphous thin film solar cells, namely, the doping concentration of the a-Si:H layer and the i-layer thickness was demonstrated. It was shown that PCR can be applied to the non-destructive characterization of a-Si:H/c-Si heterojunction solar cells yielding reliable measurements of the key parameters.« less

Muscular Oxygen Uptake Kinetics in Aged Adults.

PubMed

Koschate, J; Drescher, U; Baum, K; Eichberg, S; Schiffer, T; Latsch, J; Brixius, K; Hoffmann, U

2016-06-01

Pulmonary oxygen uptake (V˙O2) kinetics and heart rate kinetics are influenced by age and fitness. Muscular V˙O2 kinetics can be estimated from heart rate and pulmonary V˙O2. In this study the applicability of a test using pseudo-random binary sequences in combination with a model to estimate muscular V˙O2 kinetics was tested. Muscular V˙O2 kinetics were expected to be faster than pulmonary V˙O2 kinetics, slowed in aged subjects and correlated with maximum V˙O2 and heart rate kinetics. 27 elderly subjects (73±3 years; 81.1±8.2 kg; 175±4.7 cm) participated. Cardiorespiratory kinetics were assessed using the maximum of cross-correlation functions, higher maxima implying faster kinetics. Muscular V˙O2 kinetics were faster than pulmonary V˙O2 kinetics (0.31±0.1 vs. 0.29±0.1 s; p=0.004). Heart rate kinetics were not correlated with muscular or pulmonary V˙O2 kinetics or maximum V˙O2. Muscular V˙O2 kinetics correlated with maximum V˙O2 (r=0.35; p=0.033). This suggests, that muscular V˙O2 kinetics are faster than estimates from pulmonary V˙O2 and related to maximum V˙O2 in aged subjects. In the future this experimental approach may help to characterize alterations in muscular V˙O2 under various conditions independent of motivation and maximal effort. © Georg Thieme Verlag KG Stuttgart · New York.

Kinetic Damage from Meteorites

NASA Technical Reports Server (NTRS)

Cooke, William; Brown, Peter; Matney, Mark

2017-01-01

A Near Earth object impacting into Earth's atmosphere may produce damaging effects at the surface due to airblast, thermal pulse, or kinetic impact in the form of meteorites. At large sizes (>many tens of meters), the damage is amplified by the hypersonic impact of these large projectiles moving with cosmic velocity, leaving explosively produced craters. However, much more common is simple "kinetic" damage caused by the impact of smaller meteorites moving at terminal speeds. As of this date a handful of instances are definitively known of people or structures being directly hit and/or damaged by the kinetic impact of meteorites. Meteorites known to have struck humans include the Sylacauga, Alabama fall (1954) and the Mbale meteorite fall (1992). Much more common is kinetic meteorite damage to cars, buildings, and even a post box (Claxton, Georgia - 1984). Historical accounts indicate that direct kinetic damage by meteorites may be more common than recent accounts suggest (Yau et al., 1994). In this talk we will examine the contemporary meteorite flux and estimate the frequency of kinetic damage to various structures, as well as how the meteorite flux might affect the rate of human casualties. This will update an earlier study by Halliday et al (1985), adding variations expected in meteorite flux with latitude (Le Feuvre and Wieczorek, 2008) and validating these model predictions of speed and entry angle with observations from the NASA and SOMN fireball networks. In particular, we explore the physical characteristics of bright meteors which may be used as a diagnostic for estimating which fireballs produce meteorites and hence how early warning of such kinetic damage may be estimated in advance through observations and modelling.

Kinetic Damage from Meteorites

NASA Technical Reports Server (NTRS)

Cooke, William; Brown, Peter; Matney, Mark

2017-01-01

A Near Earth object impacting into Earth's atmosphere may produce damaging effects at the surface due to airblast, thermal pulse, or kinetic impact in the form of meteorites. At large sizes (greater than many tens of meters), the damage is amplified by the hypersonic impact of these large projectiles moving with cosmic velocity, leaving explosively produced craters. However, much more common is simple "kinetic" damage caused by the impact of smaller meteorites moving at terminal speeds. As of this date a handful of instances are definitively known of people or structures being directly hit and/or damaged by the kinetic impact of meteorites. Meteorites known to have struck humans include the Sylacauga, Alabama fall (1954) and the Mbale meteorite fall (1992). Much more common is kinetic meteorite damage to cars, buildings, and even a post box (Claxton, Georgia - 1984). Historical accounts indicate that direct kinetic damage by meteorites may be more common than recent accounts suggest (Yau et al., 1994). In this talk we will examine the contemporary meteorite flux and estimate the frequency of kinetic damage to various structures, as well as how the meteorite flux might affect the rate of human casualties. This will update an earlier study by Halliday et al (1985), adding variations expected in meteorite flux with latitude (Le Feuvre and Wieczorek, 2008) and validating these model predictions of speed and entry angle with observations from the NASA and SOMN fireball networks. In particular, we explore the physical characteristics of bright meteors which may be used as a diagnostic for estimating which fireballs produce meteorites and hence how early warning of such kinetic damage may be estimated in advance through observations and modeling.

Implications of Diet for the Extinction of Saber-Toothed Cats and American Lions

PubMed Central

DeSantis, Larisa R. G.; Schubert, Blaine W.; Scott, Jessica R.; Ungar, Peter S.

2012-01-01

The saber-toothed cat, Smilodon fatalis, and American lion, Panthera atrox, were among the largest terrestrial carnivores that lived during the Pleistocene, going extinct along with other megafauna ∼12,000 years ago. Previous work suggests that times were difficult at La Brea (California) during the late Pleistocene, as nearly all carnivores have greater incidences of tooth breakage (used to infer greater carcass utilization) compared to today. As Dental Microwear Texture Analysis (DMTA) can differentiate between levels of bone consumption in extant carnivores, we use DMTA to clarify the dietary niches of extinct carnivorans from La Brea. Specifically, we test the hypothesis that times were tough at La Brea with carnivorous taxa utilizing more of the carcasses. Our results show no evidence of bone crushing by P. atrox, with DMTA attributes most similar to the extant cheetah, Acinonyx jubatus, which actively avoids bone. In contrast, S. fatalis has DMTA attributes most similar to the African lion Panthera leo, implying that S. fatalis did not avoid bone to the extent previously suggested by SEM microwear data. DMTA characters most indicative of bone consumption (i.e., complexity and textural fill volume) suggest that carcass utilization by the extinct carnivorans was not necessarily more complete during the Pleistocene at La Brea; thus, times may not have been “tougher” than the present. Additionally, minor to no significant differences in DMTA attributes from older (∼30–35 Ka) to younger (∼11.5 Ka) deposits offer little evidence that declining prey resources were a primary cause of extinction for these large cats. PMID:23300674

Implications of diet for the extinction of saber-toothed cats and American lions.

PubMed

Desantis, Larisa R G; Schubert, Blaine W; Scott, Jessica R; Ungar, Peter S

2012-01-01

The saber-toothed cat, Smilodon fatalis, and American lion, Panthera atrox, were among the largest terrestrial carnivores that lived during the Pleistocene, going extinct along with other megafauna ∼12,000 years ago. Previous work suggests that times were difficult at La Brea (California) during the late Pleistocene, as nearly all carnivores have greater incidences of tooth breakage (used to infer greater carcass utilization) compared to today. As Dental Microwear Texture Analysis (DMTA) can differentiate between levels of bone consumption in extant carnivores, we use DMTA to clarify the dietary niches of extinct carnivorans from La Brea. Specifically, we test the hypothesis that times were tough at La Brea with carnivorous taxa utilizing more of the carcasses. Our results show no evidence of bone crushing by P. atrox, with DMTA attributes most similar to the extant cheetah, Acinonyx jubatus, which actively avoids bone. In contrast, S. fatalis has DMTA attributes most similar to the African lion Panthera leo, implying that S. fatalis did not avoid bone to the extent previously suggested by SEM microwear data. DMTA characters most indicative of bone consumption (i.e., complexity and textural fill volume) suggest that carcass utilization by the extinct carnivorans was not necessarily more complete during the Pleistocene at La Brea; thus, times may not have been "tougher" than the present. Additionally, minor to no significant differences in DMTA attributes from older (∼30-35 Ka) to younger (∼11.5 Ka) deposits offer little evidence that declining prey resources were a primary cause of extinction for these large cats.

Empirical Storm-Time Correction to the International Reference Ionosphere Model E-Region Electron and Ion Density Parameterizations Using Observations from TIMED/SABER

NASA Technical Reports Server (NTRS)

Mertens, Christoper J.; Winick, Jeremy R.; Russell, James M., III; Mlynczak, Martin G.; Evans, David S.; Bilitza, Dieter; Xu, Xiaojing

2007-01-01

The response of the ionospheric E-region to solar-geomagnetic storms can be characterized using observations of infrared 4.3 micrometers emission. In particular, we utilize nighttime TIMED/SABER measurements of broadband 4.3 micrometers limb emission and derive a new data product, the NO+(v) volume emission rate, which is our primary observation-based quantity for developing an empirical storm-time correction the IRI E-region electron density. In this paper we describe our E-region proxy and outline our strategy for developing the empirical storm model. In our initial studies, we analyzed a six day storm period during the Halloween 2003 event. The results of this analysis are promising and suggest that the ap-index is a viable candidate to use as a magnetic driver for our model.

Local reaction kinetics by imaging☆

PubMed Central

Suchorski, Yuri; Rupprechter, Günther

2016-01-01

In the present contribution we present an overview of our recent studies using the “kinetics by imaging” approach for CO oxidation on heterogeneous model systems. The method is based on the correlation of the PEEM image intensity with catalytic activity: scaled down to the μm-sized surface regions, such correlation allows simultaneous local kinetic measurements on differently oriented individual domains of a polycrystalline metal-foil, including the construction of local kinetic phase diagrams. This allows spatially- and component-resolved kinetic studies and, e.g., a direct comparison of inherent catalytic properties of Pt(hkl)- and Pd(hkl)-domains or supported μm-sized Pd-powder agglomerates, studies of the local catalytic ignition and the role of defects and grain boundaries in the local reaction kinetics. PMID:26865736

Model-based analysis of coupled equilibrium-kinetic processes: indirect kinetic studies of thermodynamic parameters using the dynamic data.

PubMed

Emami, Fereshteh; Maeder, Marcel; Abdollahi, Hamid

2015-05-07

Thermodynamic studies of equilibrium chemical reactions linked with kinetic procedures are mostly impossible by traditional approaches. In this work, the new concept of generalized kinetic study of thermodynamic parameters is introduced for dynamic data. The examples of equilibria intertwined with kinetic chemical mechanisms include molecular charge transfer complex formation reactions, pH-dependent degradation of chemical compounds and tautomerization kinetics in micellar solutions. Model-based global analysis with the possibility of calculating and embedding the equilibrium and kinetic parameters into the fitting algorithm has allowed the complete analysis of the complex reaction mechanisms. After the fitting process, the optimal equilibrium and kinetic parameters together with an estimate of their standard deviations have been obtained. This work opens up a promising new avenue for obtaining equilibrium constants through the kinetic data analysis for the kinetic reactions that involve equilibrium processes.

Retrieval of daytime [O3] altitude profile from measurements of 1.27 μm O2 emission in the mesosphere: a comparison of methods

NASA Astrophysics Data System (ADS)

Yankovsky, Valentine A.; Manuilova, Rada O.

2017-11-01

The altitude profiles of ozone concentration are retrieved from measurements of the volume emission rate in the 1.27 μm oxygen band in the TIMED-SABER experiment. In this study we compare the methods of retrieval of daytime [O3] altitude profile in the framework of two models: electronic-vibrational kinetics and a purely electronic kinetics of excited products of ozone and oxygen photolysis. In order to retrieve the [O3] altitude profile from the measurements of the intensity of the O2 band in the region of 1.27 μm correctly, it is necessary to use the photochemical model of the electronic-vibrational kinetics of excited products of ozone and oxygen photolysis in the mesosphere and lower thermosphere.

Sounding of the Atmosphere using Broadband Emission Radiometry (SABER) Observations of Polar Winter Conditions in 2009; Comparisons with Years 2002-2008

DTIC Science & Technology

2011-02-03

focused upon the tropospheric forcing, for example the role of blocking systems (large-scale, quasi-stationary, high-pressure systems that may steer...disruptions of the stratosphere may in turn perturb the troposphere and even affect surface weather. In early February 2009, London received heavy snowfall...global measurements from twelve SSW periods, found cooling in the equatorial lower stratosphere and upper troposphere that is associated with increased

Chemical kinetics as a contract sport

DOE Office of Scientific and Technical Information (OSTI.GOV)

Kolb, C.E.

1990-01-01

Earlier in this century chemical kinetics was a basic physical chemistry research topic widely pursued in leading academic chemistry departments. Chemical kinetics now appears to be a discipline practiced chiefly for its applications to societal problems. The chemical kinetics activities directed by D.M. Golden at SRI International are strikingly successful in generating data for key applied problems while at the same time advancing our understanding of chemical kinetics as a scientific discipline. In this talk, the author will contrast the chemical kinetics activities in two contract R D laboratories, one on the right side of the U.S. (ARI) and themore » other on the left (SRI). Their approach to common applied problems ranging from stratospheric heterogeneous kinetics to plasma etching systems for semiconductor processing will be compared and contrasted. Empirically discovered Golden Rules for the pursuit of quality chemical kinetics research in a contract R D environment will be presented and discussed.« less

Drug-Target Kinetics in Drug Discovery.

PubMed

Tonge, Peter J

2018-01-17

The development of therapies for the treatment of neurological cancer faces a number of major challenges including the synthesis of small molecule agents that can penetrate the blood-brain barrier (BBB). Given the likelihood that in many cases drug exposure will be lower in the CNS than in systemic circulation, it follows that strategies should be employed that can sustain target engagement at low drug concentration. Time dependent target occupancy is a function of both the drug and target concentration as well as the thermodynamic and kinetic parameters that describe the binding reaction coordinate, and sustained target occupancy can be achieved through structural modifications that increase target (re)binding and/or that decrease the rate of drug dissociation. The discovery and deployment of compounds with optimized kinetic effects requires information on the structure-kinetic relationships that modulate the kinetics of binding, and the molecular factors that control the translation of drug-target kinetics to time-dependent drug activity in the disease state. This Review first introduces the potential benefits of drug-target kinetics, such as the ability to delineate both thermodynamic and kinetic selectivity, and then describes factors, such as target vulnerability, that impact the utility of kinetic selectivity. The Review concludes with a description of a mechanistic PK/PD model that integrates drug-target kinetics into predictions of drug activity.

Drug–Target Kinetics in Drug Discovery

PubMed Central

2017-01-01

The development of therapies for the treatment of neurological cancer faces a number of major challenges including the synthesis of small molecule agents that can penetrate the blood-brain barrier (BBB). Given the likelihood that in many cases drug exposure will be lower in the CNS than in systemic circulation, it follows that strategies should be employed that can sustain target engagement at low drug concentration. Time dependent target occupancy is a function of both the drug and target concentration as well as the thermodynamic and kinetic parameters that describe the binding reaction coordinate, and sustained target occupancy can be achieved through structural modifications that increase target (re)binding and/or that decrease the rate of drug dissociation. The discovery and deployment of compounds with optimized kinetic effects requires information on the structure–kinetic relationships that modulate the kinetics of binding, and the molecular factors that control the translation of drug–target kinetics to time-dependent drug activity in the disease state. This Review first introduces the potential benefits of drug-target kinetics, such as the ability to delineate both thermodynamic and kinetic selectivity, and then describes factors, such as target vulnerability, that impact the utility of kinetic selectivity. The Review concludes with a description of a mechanistic PK/PD model that integrates drug–target kinetics into predictions of drug activity. PMID:28640596

Multi-Centre Clinical Evaluation of Photothermal Radiometry and Luminescence Correlated with International Benchmarks for Caries Detection

PubMed Central

Silvertown, Josh D.; Abrams, Stephen H.; Sivagurunathan, Koneswaran S.; Kennedy, Julia; Jeon, Jinseok; Mandelis, Andreas; Hellen, Adam; Hellen, Warren; Elman, Gary; Ehrlich, Richard; Chouljian, Raffy; Finer, Yoav; Amaechi, Bennett T.

2017-01-01

Introduction: A clinical study was initiated to investigate a caries detection device (The Canary System (CS)), based on photothermal radiometry and modulated luminescence (PTR-LUM). The primary objective of this study was to determine if PTR-LUM values (in the form of Canary Numbers; CN) correlate with International Caries Diagnostic and Assessment System (ICDAS II) scores and clinical situations. The secondary objectives of this study were to monitor the safety of PTR-LUM, and collect data to determine how CN values could be used to differentiate healthy from decayed tooth surfaces on a normalized scale. Methods: The trial was a four site, non-blinded study. Data was collected from 92 patients, resulting in 842 scanned tooth surfaces over multiple appointments. Surfaces were assessed according to ICDAS II, and further stratified into five clinical situation categories: 1) healthy surface, 2) non-cavitated white and/or brown spots; 3) caries lesions; 4) cavitation and 5) teeth undergoing remineralization therapy. CN data was analyzed separately for smooth and occlusal surfaces. Using a semi-logarithmic graph to plot raw CN (rCN) and normalized (CN) values, rCN data was normalized into a scale of 0-100. Results: Linear correlations (R2) between CN and ICDAS II groupings for smooth and occlusal surfaces were calculated as 0.9759 and 0.9267, respectively. The mean CN values derived from smooth (20.2±0.6) and occlusal (19±1.0) surfaces identified as healthy had significantly lower CN values (P<0.05) compared with the values from the other clinical situation categories. No adverse events were reported. Conclusion: The present study demonstrated the safety of PTR-LUM for clinical application and its ability to distinguish sound from carious tooth surfaces. A clear shift from the baseline in both PTR and LUM in carious enamel was observed depending on the type and nature of the lesion, and correlated to ICDAS II classification codes, which enabled the preliminary

A kinetics database and scripts for PHREEQC

NASA Astrophysics Data System (ADS)

Hu, B.; Zhang, Y.; Teng, Y.; Zhu, C.

2017-12-01

Kinetics of geochemical reactions has been increasingly used in numerical models to simulate coupled flow, mass transport, and chemical reactions. However, the kinetic data are scattered in the literature. To assemble a kinetic dataset for a modeling project is an intimidating task for most. In order to facilitate the application of kinetics in geochemical modeling, we assembled kinetics parameters into a database for the geochemical simulation program, PHREEQC (version 3.0). Kinetics data were collected from the literature. Our database includes kinetic data for over 70 minerals. The rate equations are also programmed into scripts with the Basic language. Using the new kinetic database, we simulated reaction path during the albite dissolution process using various rate equations in the literature. The simulation results with three different rate equations gave difference reaction paths at different time scale. Another application involves a coupled reactive transport model simulating the advancement of an acid plume in an acid mine drainage site associated with Bear Creek Uranium tailings pond. Geochemical reactions including calcite, gypsum, and illite were simulated with PHREEQC using the new kinetic database. The simulation results successfully demonstrated the utility of new kinetic database.

Chemical kinetics on extrasolar planets.

PubMed

Moses, Julianne I

2014-04-28

Chemical kinetics plays an important role in controlling the atmospheric composition of all planetary atmospheres, including those of extrasolar planets. For the hottest exoplanets, the composition can closely follow thermochemical-equilibrium predictions, at least in the visible and infrared photosphere at dayside (eclipse) conditions. However, for atmospheric temperatures approximately <2000K, and in the uppermost atmosphere at any temperature, chemical kinetics matters. The two key mechanisms by which kinetic processes drive an exoplanet atmosphere out of equilibrium are photochemistry and transport-induced quenching. I review these disequilibrium processes in detail, discuss observational consequences and examine some of the current evidence for kinetic processes on extrasolar planets.

New Non-LTE Model of OH and CO2 Emission in the Mesosphere-Lower Thermosphere and its Application to Retrieving Nighttime Parameters

NASA Astrophysics Data System (ADS)

Panka, Peter A.

The hydroxyl, OH, and carbon dioxide, CO2, molecules and oxygen atoms, O(3P), are important parameters that characterize the chemistry, energetics, and dynamics of the nighttime mesosphere and lower thermosphere (MLT) region. Hence, there is much interest in obtaining high quality observations of these parameters in order to study the short-term variability as well as the long-term trends in characteristics of the MLT region. The Sounding of the Atmosphere using Broadband Emission Radiometry (SABER) instrument on board the Thermosphere, Ionosphere, Mesosphere, Energetics, and Dynamics (TIMED) satellite has been taking global, simultaneous measurements of limb infrared radiance in 10 spectral channels, including the OH 2.0 and 1.6-micron and CO2 4.3-micron emissions channels, continuously since late January 2002. These measurements can be interpreted using sophisticated non-Local Thermodynamic Equilibrium (non-LTE) models of OH and CO2 infrared emissions which can then be applied to obtain densities of these parameters (2.0 and 1.6-micron channel for O(3P)/OH and 4.3-micron channel for CO2). The latest non-LTE models of these molecules, however, do not fully represent all the dominant energy transfer mechanisms which influence their vibrational level distributions and infrared emissions. In particular, non-LTE models of CO2 4.3-micron emissions currently under-predict SABER measurements by up to 80%, and its application for the retrieval of CO2 will result in unrealistic densities. Additionally, current O(3P) retrievals from SABER OH emissions have been reported to be at least 30% higher compared to studies using other instruments. Methods to obtain OH total densities from SABER measurements have yet to be developed. Recent studies, however, have discovered a new energy transfer mechanism which influences both OH and CO2 infrared emissions, OH(v) → O(1D) → N2( v) → CO2(v3). This study focuses on the impact of this new mechanism on OH and CO2 infrared emissions

Τhe observational and empirical thermospheric CO2 and NO power do not exhibit power-law behavior; an indication of their reliability

NASA Astrophysics Data System (ADS)

Varotsos, C. A.; Efstathiou, M. N.

2018-03-01

In this paper we investigate the evolution of the energy emitted by CO2 and NO from the Earth's thermosphere on a global scale using both observational and empirically derived data. In the beginning, we analyze the daily power observations of CO2 and NO received from the Sounding of the Atmosphere using Broadband Emission Radiometry (SABER) equipment on the NASA Thermosphere-Ionosphere-Mesosphere Energetics and Dynamics (TIMED) satellite for the entire period 2002-2016. We then perform the same analysis on the empirical daily power emitted by CO2 and NO that were derived recently from the infrared energy budget of the thermosphere during 1947-2016. The tool used for the analysis of the observational and empirical datasets is the detrended fluctuation analysis, in order to investigate whether the power emitted by CO2 and by NO from the thermosphere exhibits power-law behavior. The results obtained from both observational and empirical data do not support the establishment of the power-law behavior. This conclusion reveals that the empirically derived data are characterized by the same intrinsic properties as those of the observational ones, thus enhancing the validity of their reliability.

Derivation of gravity wave intrinsic parameters and vertical wavelength using a single scanning OH(3-1) airglow spectrometer

NASA Astrophysics Data System (ADS)

Wüst, Sabine; Offenwanger, Thomas; Schmidt, Carsten; Bittner, Michael; Jacobi, Christoph; Stober, Gunter; Yee, Jeng-Hwa; Mlynczak, Martin G.; Russell, James M., III

2018-05-01

For the first time, we present an approach to derive zonal, meridional, and vertical wavelengths as well as periods of gravity waves based on only one OH* spectrometer, addressing one vibrational-rotational transition. Knowledge of these parameters is a precondition for the calculation of further information, such as the wave group velocity vector.OH(3-1) spectrometer measurements allow the analysis of gravity wave ground-based periods but spatial information cannot necessarily be deduced. We use a scanning spectrometer and harmonic analysis to derive horizontal wavelengths at the mesopause altitude above Oberpfaffenhofen (48.09° N, 11.28° E), Germany for 22 nights in 2015. Based on the approximation of the dispersion relation for gravity waves of low and medium frequencies and additional horizontal wind information, we calculate vertical wavelengths. The mesopause wind measurements nearest to Oberpfaffenhofen are conducted at Collm (51.30° N, 13.02° E), Germany, ca. 380 km northeast of Oberpfaffenhofen, by a meteor radar.In order to compare our results, vertical temperature profiles of TIMED-SABER (thermosphere ionosphere mesosphere energetics dynamics, sounding of the atmosphere using broadband emission radiometry) overpasses are analysed with respect to the dominating vertical wavelength.

Study of Exciton Hopping Transport in PbS Colloidal Quantum Dot Thin Films Using Frequency- and Temperature-Scanned Photocarrier Radiometry

NASA Astrophysics Data System (ADS)

Hu, Lilei; Mandelis, Andreas; Melnikov, Alexander; Lan, Xinzheng; Hoogland, Sjoerd; Sargent, Edward H.

2017-01-01

Solution-processed colloidal quantum dots (CQDs) are promising materials for realizing low-cost, large-area, and flexible photovoltaic devices. The study of charge carrier transport in quantum dot solids is essential for understanding energy conversion mechanisms. Recently, solution-processed two-layer oleic-acid-capped PbS CQD solar cells with one layer treated with tetrabutylammonium iodide (TBAI) serving as the main light-absorbing layer and the other treated with 1,2-ethanedithiol (EDT) acting as an electron-blocking/hole-extraction layer were reported. These solar cells demonstrated a significant improvement in power conversion efficiency of 8.55% and long-term air stability. Coupled with photocarrier radiometry measurements, this work used a new trap-state mediated exciton hopping transport model, specifically for CQD thin films, to unveil and quantify exciton transport mechanisms through the extraction of hopping transport parameters including exciton lifetimes, hopping diffusivity, exciton detrapping time, and trap-state density. It is shown that PbS-TBAI has higher trap-state density than PbS-EDT that results in higher PbS-EDT exciton lifetimes. Hopping diffusivities of both CQD thin film types show similar temperature dependence, particularly higher temperatures yield higher hopping diffusivity. The higher diffusivity of PbS-TBAI compared with PbS-EDT indicates that PbS-TBAI is a much better photovoltaic material than PbS-EDT. Furthermore, PCR temperature spectra and deep-level photothermal spectroscopy provided additional insights to CQD surface trap states: PbS-TBAI thin films exhibit a single dominant trap level, while PbS-EDT films with lower trap-state densities show multiple trap levels.

Global Distribution and Variations of NO Infrared Radiative Flux and Its Responses to Solar Activity and Geomagnetic Activity in the Thermosphere

NASA Astrophysics Data System (ADS)

Tang, Chaoli; Wei, Yuanyuan; Liu, Dong; Luo, Tao; Dai, Congming; Wei, Heli

2017-12-01

The global distribution and variations of NO infrared radiative flux (NO-IRF) are presented during 2002-2016 in the thermosphere covering 100-280 km altitude based on Sounding of the Atmosphere using Broadband Emission Radiometry (SABER) data set. For investigating the spatial variations of the mutual relationship between NO-IRF and solar activity, the altitude ranges from 100 km to 280 km are divided into 90 altitude bins, and the latitude regions of 83°S-83°N are divided into 16 latitude bins. By processing about 1.8E9 NO-IRF observation values from about 5E6 vertical nighttime profiles recorded in SABER data set, we obtained more than 4.1E8 samples of NO-IRF. The annual-mean values of NO-IRF are then calculated by all available NO-IRF samples within each latitude and altitude bin. Local latitudinal maxima in NO-IRF are found between 120 and 145 km altitude, and the maximum NO-IRF located at polar regions are 3 times more than that of the minimum at equatorial region. The influences of solar and geomagnetic activity on the spatial variations of NO-IRF are investigated. Both the NO-IRF and its response to solar and geomagnetic activity show nearly symmetric distribution between the two hemispheres. It is demonstrated that the observed changes in NO-IRF at altitudes between 100 and 225 km correlate well with the changes in solar activity. The NO-IRF at solar maximum is about 4 times than that at solar minimum, and the current maximum of NO-IRF in 2014 is less than 70% of the prior maximum in 2001. For the first time, the response ranges of the NO-IRF to solar and geomagnetic activity at different altitudes and latitudes are reported.

Peak height of OH airglow derived from simultaneous observations a Fabry-Perot interferometer and a meteor radar

NASA Astrophysics Data System (ADS)

Yu, Tao; Zuo, Xiaomin; Xia, Chunliang; Li, Mingyuan; Huang, Cong; Mao, Tian; Zhang, Xiaoxin; Zhao, Biqiang; Liu, Libo

2017-04-01

A new method for estimating daily averaged peak height of the OH airglow layer from a ground-based meteor radar (MR) and a Fabry-Perot interferometer (FPI) is presented. The first results are derived from 4 year simultaneous measurements of winds by a MR and a FPI at two adjacent stations over center China and are compared with observations from the Thermosphere Ionosphere Mesosphere Energetics and Dynamics/Sounding of the Atmosphere using Broadband Emission Radiometry (SABER) instrument. The OH airglow peak heights, which are derived by using correlation analysis between winds of the FPI and MR, are found to generally peak at an altitude of 87 km and frequently varied between 80 km and 90 km day to day. In comparison with SABER OH 1.6 μm observations, reasonable similarity of airglow peak heights is found, and rapid day-to-day variations are also pronounced. Lomb-Scargle analysis is used to determine cycles of temporal variations of airglow peak heights, and there are obvious periodic variations both in our airglow peak heights and in the satellite observations. In addition to the annual, semiannual, monthly, and three monthly variations, the shorter time variations, e.g., day-to-day and several days' variations, are also conspicuous. The day-to-day variations of airglow height obviously could reduce observation accuracy and lead to some deviations in FPI measurements. These FPI wind deviations arising from airglow height variations are also estimated to be about 3-5 m/s from 2011 to 2015, with strong positive correlation with airglow peak height variation. More attention should be paid to the wind deviations associated with airglow height variation when using and interpreting winds measured by FPI.

Kinetic energy equations for the average-passage equation system

NASA Technical Reports Server (NTRS)

Johnson, Richard W.; Adamczyk, John J.

1989-01-01

Important kinetic energy equations derived from the average-passage equation sets are documented, with a view to their interrelationships. These kinetic equations may be used for closing the average-passage equations. The turbulent kinetic energy transport equation used is formed by subtracting the mean kinetic energy equation from the averaged total instantaneous kinetic energy equation. The aperiodic kinetic energy equation, averaged steady kinetic energy equation, averaged unsteady kinetic energy equation, and periodic kinetic energy equation, are also treated.

A new application of hyperspectral radiometry: the characterization of painted surfaces

NASA Astrophysics Data System (ADS)

Wang, Cong; Salvatici, Teresa; Camaiti, Mara; Del Ventisette, Chiara; Moretti, Sandro

2016-04-01

Hyperspectral sensors, working in the Visible-Near Infrared and Short Wave Infrared (VNIR-SWIR) regions, are widely employed for geological applications since they can discriminate many inorganic (e.g. mineral phases) and organic compounds (i.e. vegetations and soils) [1]. Their advantage is to work in the portion of the solar spectrum used for remote sensors. Some examples of application of the hyperspectral sensors to the conservation of cultural heritage are also known. These applications concern the detection of gypsum on historical buildings [2], and the monitoring of organic protective materials on stone surfaces [3]. On the contrary, hyperspectral radiometry has not been employed on painted surfaces. Indeed, the characterization of these surfaces is mainly performed with sophisticated, micro-destractive and time-consuming laboratory analyses (i.e. SEM-EDS, FTIR and, GC-MS spectroscopy) or through portable and non-invasive instruments (mid FTIR, micro Raman, XRF, FORS) which work in different spectral ranges [4,5]. In this work the discrimination of many organic and inorganic components from paintings was investigated through a hyperspectral spectroradiometer ,which works in the 350-2500 nm region. The reflectance spectra were collected by the contact reflectance probe, equipped with an internal light source with fixed geometry of illumination and shot. Several standards samples, selected among the most common materials of paintings, were prepared and analysed in order to collect reference spectra. The standards were prepared with powders of 7 pure pigments, films of 5 varnishes (natural and synthetic), and films of 3 dried binding media. Monochromatic painted surfaces have also been prepared and investigated to verify the identification of different compounds on the surface. The results show that the discrimination of pure products is possible in the VNIR-SWIR region, except for compounds with similar composition (e.g. natural resins such as dammar and

Associations between timing in the baseball pitch and shoulder kinetics, elbow kinetics, and ball speed.

PubMed

Urbin, M A; Fleisig, Glenn S; Abebe, Asheber; Andrews, James R

2013-02-01

A baseball pitcher's ability to maximize ball speed while avoiding shoulder and elbow injuries is an important determinant of a successful career. Pitching injuries are attributed to microtrauma brought about by the repetitive stress of high-magnitude shoulder and elbow kinetics. Over a number of pitches, variations in timing peak angular velocities of trunk segment rotations will be significantly associated with ball speed and upper extremity kinetic parameters. Descriptive laboratory study. Kinematic and kinetic data were derived from 9 to 15 fastball pitches performed by 16 active, healthy collegiate (n = 8) and professional (n = 8) pitchers via 3-dimensional motion capture (240 Hz). Each pitch was decomposed into 4 phases corresponding to the time between peak angular velocities of sequential body segment rotations. Four mixed models were used to evaluate which phases varied significantly in relation to ball speed, peak shoulder proximal force, peak shoulder internal rotation torque, and peak elbow varus torque. Mixed-model parameter coefficient estimates were used to quantify the influence of these variations in timing on ball speed and upper extremity kinetics. All 4 mixed models were significant (P < .05). The time from stride-foot contact to peak pelvis angular velocity varied significantly in relation to all upper extremity kinetic parameters and ball speed. Increased time in this phase correlated with decreases in all parameters. Decreased ball speed also correlated with increased time between peak upper torso and elbow extension angular velocities. Decreased shoulder proximal force also correlated with increased time between peak pelvis and upper torso angular velocities. There are specific phases that vary in relation to ball speed and upper extremity kinetic parameters, reinforcing the importance of effectively and consistently timing segmental interactions. For the specific interactions that varied significantly, increased phase times were associated

Kinetic Description of the Impedance Probe

NASA Astrophysics Data System (ADS)

Oberrath, Jens; Lapke, Martin; Mussenbrock, Thomas; Brinkmann, Ralf

2011-10-01

Active plasma resonance spectroscopy is a well known diagnostic method. Many concepts of this method are theoretically investigated and realized as a diagnostic tool, one of which is the impedance probe (IP). The application of such a probe in plasmas with pressures of a few Pa raises the question whether kinetic effects have to be taken into account or not. To address this question a kinetic model is necessary. A general kinetic model for an electrostatic concept of active plasma spectroscopy was presented by R.P. Brinkmann and can be used to describe the multipole resonance probe (MRP). In principle the IP is interpretable as a special case of the MRP in lower order. Thus, we are able to describe the IP by the kinetic model of the MRP. Based on this model we derive a solution to investigate the influence of kinetic effects to the resonance behavior of the IP. Active plasma resonance spectroscopy is a well known diagnostic method. Many concepts of this method are theoretically investigated and realized as a diagnostic tool, one of which is the impedance probe (IP). The application of such a probe in plasmas with pressures of a few Pa raises the question whether kinetic effects have to be taken into account or not. To address this question a kinetic model is necessary. A general kinetic model for an electrostatic concept of active plasma spectroscopy was presented by R.P. Brinkmann and can be used to describe the multipole resonance probe (MRP). In principle the IP is interpretable as a special case of the MRP in lower order. Thus, we are able to describe the IP by the kinetic model of the MRP. Based on this model we derive a solution to investigate the influence of kinetic effects to the resonance behavior of the IP. The authors acknowledge the support by the Deutsche Forschungsgemeinschaft (DFG) via the Ruhr University Research School and the Federal Ministry of Education and Research in frame of the PluTO project.

Uncertainty of Passive Imager Cloud Optical Property Retrievals to Instrument Radiometry and Model Assumptions: Examples from MODIS

NASA Technical Reports Server (NTRS)

Platnick, Steven; Wind, Galina; Meyer, Kerry; Amarasinghe, Nandana; Arnold, G. Thomas; Zhang, Zhibo; King, Michael D.

2013-01-01

The optical and microphysical structure of clouds is of fundamental importance for understanding a variety of cloud radiation and precipitation processes. With the advent of MODIS on the NASA EOS Terra and Aqua platforms, simultaneous global-daily 1 km retrievals of cloud optical thickness (COT) and effective particle radius (CER) are provided, as well as the derived water path (WP). The cloud product (MOD06/MYD06 for MODIS Terra and Aqua, respectively) provides separate retrieval datasets for various two-channel retrievals, typically a VISNIR channel paired with a 1.6, 2.1, and 3.7 m spectral channel. The MOD06 forward model is derived from on a homogeneous plane-parallel cloud. In Collection 5 processing (completed in 2007 with a modified Collection 5.1 completed in 2010), pixel-level retrieval uncertainties were calculated for the following non-3-D error sources: radiometry, surface spectral albedo, and atmospheric corrections associated with model analysis uncertainties (water vapor only). The latter error source includes error correlation across the retrieval spectral channels. Estimates of uncertainty in 1 aggregated (Level-3) means were also provided assuming unity correlation between error sources for all pixels in a grid for a single day, and zero correlation of error sources from one day to the next. I n Collection 6 (expected to begin in late summer 2013) we expanded the uncertainty analysis to include: (a) scene-dependent calibration uncertainty that depends on new band and detector-specific Level 1B uncertainties, (b) new model error sources derived from the look-up tables which includes sensitivities associated with wind direction over the ocean and uncertainties in liquid water and ice effective variance, (c) thermal emission uncertainties in the 3.7 m band associated with cloud and surface temperatures that are needed to extract reflected solar radiation from the total radiance signal, (d) uncertainty in the solar spectral irradiance at 3.7 m, and

Uncertainty of passive imager cloud retrievals to instrument radiometry and model assumptions: Examples from MODIS Collection 6

NASA Astrophysics Data System (ADS)

Platnick, S.; Wind, G.; Amarasinghe, N.; Arnold, G. T.; Zhang, Z.; Meyer, K.; King, M. D.

2013-12-01

The optical and microphysical structure of clouds is of fundamental importance for understanding a variety of cloud radiation and precipitation processes. With the advent of MODIS on the NASA EOS Terra and Aqua platforms, simultaneous global/daily 1km retrievals of cloud optical thickness (COT) and effective particle radius (CER) are provided, as well as the derived water path (WP). The cloud product (MOD06/MYD06 for MODIS Terra and Aqua, respectively) provides separate retrieval datasets for various two-channel retrievals, typically a VIS/NIR channel paired with a 1.6, 2.1, and 3.7 μm spectral channel. The MOD06 forward model is derived from a homogeneous plane-parallel cloud. In Collection 5 processing (completed in 2007 with a modified Collection 5.1 completed in 2010), pixel-level retrieval uncertainties were calculated for the following non-3-D error sources: radiometry, surface spectral albedo, and atmospheric corrections associated with model analysis uncertainties (water vapor only). The latter error source includes error correlation across the retrieval spectral channels. Estimates of uncertainty in 1° aggregated (Level-3) means were also provided assuming unity correlation between error sources for all pixels in a grid for a single day, and zero correlation of error sources from one day to the next. In Collection 6 (expected to begin in late summer 2013) we expanded the uncertainty analysis to include: (a) scene-dependent calibration uncertainty that depends on new band and detector-specific Level 1B uncertainties, (b) new model error sources derived from the look-up tables which includes sensitivities associated with wind direction over the ocean and uncertainties in liquid water and ice effective variance, (c) thermal emission uncertainties in the 3.7 μm band associated with cloud and surface temperatures that are needed to extract reflected solar radiation from the total radiance signal, (d) uncertainty in the solar spectral irradiance at 3.7 �

Transient state kinetics tutorial using the kinetics simulation program, KINSIM.

PubMed Central

Wachsstock, D H; Pollard, T D

1994-01-01

This article provides an introduction to a computer tutorial on transient state kinetics. The tutorial uses our Macintosh version of the computer program, KINSIM, that calculates the time course of reactions. KINSIM is also available for other popular computers. This program allows even those investigators not mathematically inclined to evaluate the rate constants for the transitions between the intermediates in any reaction mechanism. These rate constants are one of the insights that are essential for understanding how biochemical processes work at the molecular level. The approach is applicable not only to enzyme reactions but also to any other type of process of interest to biophysicists, cell biologists, and molecular biologists in which concentrations change with time. In principle, the same methods could be used to characterize time-dependent, large-scale processes in ecology and evolution. Completion of the tutorial takes students 6-10 h. This investment is rewarded by a deep understanding of the principles of chemical kinetics and familiarity with the tools of kinetics simulation as an approach to solve everyday problems in the laboratory. PMID:7811941

The variability of SE2 tide extracted from TIMED/SABER observations

NASA Astrophysics Data System (ADS)

Li, Xing; Wan, Weixing; Ren, Zhipeng; Yu, You

2017-04-01

Based on the temperature observations of the SABER/TIMED, the variability of the non-migrating tide SE2 with high resolution (one-day) is analyzed, using the method from Li et al., [2015]. From the temperature observation data measured in the mesosphere and lower atmosphere region (MLT, 70-110 km altitudes) and at the low- and mid -latitudes (45S - 45N) from2002 to 2012), we obtained the non-migrating tide SE2 and further studied it in detail. It is found that the climatological features (large time scale variability and spatial distribution) of the SE2 tidal component are similar with the results from the previous researches, which are picked up from the interpolated data with 60-day resolution. The climatological features are that the SE2 tidal component manifests mainly at the low-mid latitudes around 30. The northern hemisphere tidal amplitudes below 110 km are larger than the southern hemisphere tide, at the same time, its peaks below 110 km mainly present between 100 and 110 km altitude; the tidal amplitudes below 110 km occur a north-south asymmetry about the equator in the annual variation: in the southern hemisphere, SE2 occurs with an obvious annual variation with a maximum of tidal amplitudes in December; while, in the northern one, the semi-annual variations with maximum at the equinoxes are stronger than that in the southern one. Herein, owing to the high-resolution tidal data (one day), we could research the short term (day-to-day) variations of the SE2 tide. We found that: (1) the day-to-day variations manifests mainly at the altitudes range between 100 and 110 km; (2) it increases gradually with latitudes and it is stronger at the low-mid latitudes; (3) it is relatively slightly stronger around solstices than equinoxes; (4) it does not present a remarkably inter-annual variation. Finally, the SE2 day-to-day variations may be composed by the absolute amplitudes' variance and the impact of the wave phases. In addition, the variations of

Relativistic Kinetic Theory

NASA Astrophysics Data System (ADS)

Vereshchagin, Gregory V.; Aksenov, Alexey G.

2017-02-01

Preface; Acknowledgements; Acronyms and definitions; Introduction; Part I. Theoretical Foundations: 1. Basic concepts; 2. Kinetic equation; 3. Averaging; 4. Conservation laws and equilibrium; 5. Relativistic BBGKY hierarchy; 6. Basic parameters in gases and plasmas; Part II. Numerical Methods: 7. The basics of computational physics; 8. Direct integration of Boltzmann equations; 9. Multidimensional hydrodynamics; Part III. Applications: 10. Wave dispersion in relativistic plasma; 11. Thermalization in relativistic plasma; 12. Kinetics of particles in strong fields; 13. Compton scattering in astrophysics and cosmology; 14. Self-gravitating systems; 15. Neutrinos, gravitational collapse and supernovae; Appendices; Bibliography; Index.

The Einstein-Vlasov System/Kinetic Theory.

PubMed

Andréasson, Håkan

2011-01-01

The main purpose of this article is to provide a guide to theorems on global properties of solutions to the Einstein-Vlasov system. This system couples Einstein's equations to a kinetic matter model. Kinetic theory has been an important field of research during several decades in which the main focus has been on non-relativistic and special relativistic physics, i.e., to model the dynamics of neutral gases, plasmas, and Newtonian self-gravitating systems. In 1990, Rendall and Rein initiated a mathematical study of the Einstein-Vlasov system. Since then many theorems on global properties of solutions to this system have been established. This paper gives introductions to kinetic theory in non-curved spacetimes and then the Einstein-Vlasov system is introduced. We believe that a good understanding of kinetic theory in non-curved spacetimes is fundamental to a good comprehension of kinetic theory in general relativity.

The response of the temperature of cold-point mesopause to solar activity based on SABER data set

NASA Astrophysics Data System (ADS)

Tang, Chaoli; Liu, Dong; Wei, Heli; Wang, Yingjian; Dai, Congming; Wu, Pengfei; Zhu, Wenyue; Rao, Ruizhong

2016-07-01

The thermal structure and energy balance of upper atmosphere are dominated by solar activity. The response of cold-point mesopause (CPM) to solar activity is an important form. This article presents the response of the temperature of CPM (T-CPM) to solar activity using 14 year Sounding of the Atmosphere using Broadband Emission Radiometry data series over 80°S-80°N regions. These regions are divided into 16 latitude zones with 10° interval, and the spatial areas of 80°S-80°N, 180°W-180°E are divided into 96 lattices with 10°(latitude) × 60°(longitude) grid. The annual-mean values of T-CPM and F10.7 are calculated. The least squares regression method and correlation analysis are applied to these annual-mean series. First, the results show that the global T-CPM is significantly correlated to solar activity at the 0.05 level of significance with correlation coefficient of 0.90. The global solar response of T-CPM is 4.89 ± 0.67 K/100 solar flux unit. Then, for each latitude zone, the solar response of T-CPM and its fluctuation are obtained. The solar response of T-CPM becomes stronger with increasing latitude. The fluctuation ranges of solar response at middle-latitude regions are smaller than those of the equator and high-latitude regions, and the global distribution takes on W shape. The corelationship analysis shows that the T-CPM is significantly correlated to solar activity at the 0.05 level of significance for each latitude zone. The correlation coefficients at middle-latitude regions are higher than those of the equator and high-latitude regions, and the global distribution takes on M shape. At last, for each grid cell, the response of T-CPM to solar activity and their correlation coefficient are presented.

Kinetic advantage of controlled intermediate nuclear fusion

NASA Astrophysics Data System (ADS)

Guo, Xiaoming

2012-09-01

The dominated process of controlled fusion is to let nuclei gain enough kinetic energy to overcome Coulomb barrier. As a result, a fusion scheme can consider two factors in its design: to increase kinetic energy of nuclei and to alter the Coulomb barrier. Cold Fusion and Hot fusion are all one-factor schemes while Intermediate Fusion is a twofactors scheme. This made CINF kinetically superior. Cold Fusion reduces deuteron-deuteron distance, addressing Coulomb barrier, and Hot Fusion heat up plasma into extreme high temperature, addressing kinetic energy. Without enough kinetic energy made Cold Fusion skeptical. Extreme high temperature made Hot Fusion very difficult to engineer. Because CIFN addresses both factors, CIFN is a more promising technique to be industrialized.

Terra and Aqua MODIS Design, Radiometry, and Geometry in Support of Land Remote Sensing

NASA Technical Reports Server (NTRS)

Xiong, Xiaoxiong; Wolfe, Robert; Barnes, William; Guenther, Bruce; Vermote, Eric; Saleous, Nazmi; Salomonson, Vincent

2011-01-01

The NASA Earth Observing System (EOS) mission includes the construction and launch of two nearly identical Moderate Resolution Imaging Spectroradiometer (MODIS) instruments. The MODIS proto-flight model (PFM) is onboard the EOS Terra satellite (formerly EOS AM-1) launched on December 18, 1999 and hereafter referred to as Terra MODIS. Flight model-1 (FM1) is onboard the EOS Aqua satellite (formerly EOS PM-1) launched on May 04, 2002 and referred to as Aqua MODIS. MODIS was developed based on the science community s desire to collect multiyear continuous datasets for monitoring changes in the Earth s land, oceans and atmosphere, and the human contributions to these changes. It was designed to measure discrete spectral bands, which includes many used by a number of heritage sensors, and thus extends the heritage datasets to better understand both long- and short-term changes in the global environment (Barnes and Salomonson 1993; Salomonson et al. 2002; Barnes et al. 2002). The MODIS development, launch, and operation were managed by NASA/Goddard Space Flight Center (GSFC), Greenbelt, Maryland. The sensors were designed, built, and tested by Raytheon/ Santa Barbara Remote Sensing (SBRS), Goleta, California. Each MODIS instrument offers 36 spectral bands, which span the spectral region from the visible (0.41 m) to long-wave infrared (14.4 m). MODIS collects data at three different nadir spatial resolutions: 0.25, 0.5, and 1 km. Key design specifications, such as spectral bandwidths, typical scene radiances, required signal-to-noise ratios (SNR) or noise equivalent temperature differences (NEDT), and primary applications of each MODIS spectral band are summarized in Table 7.1. These parameters were the basis for the MODIS design. More details on the evolution of the NASA EOS and development of the MODIS instruments are provided in Chap. 1. This chapter focuses on the MODIS sensor design, radiometry, and geometry as they apply to land remote sensing. With near

Thermogravimetric kinetic study of agricultural residue biomass pyrolysis based on combined kinetics.

PubMed

Wang, Xun; Hu, Mian; Hu, Wanyong; Chen, Zhihua; Liu, Shiming; Hu, Zhiquan; Xiao, Bo

2016-11-01

Pyrolytic kinetic of an agricultural residue (AR) feedstock, a mixture of plants (cotton, wheat, rich, corn) stems, was investigated based on combined kinetics. The most suitable mechanism for AR one-step pyrolysis was f(α)=(1-α)(1.1816)α(-1.8428) with kinetic parameters of: apparent activation energy 221.7kJ/mol, pre-exponential factor 4.17E16s(-1). Pyrolysis of AR feedstock could not be described by one-step reaction attributes to heterogeneous features of pyrolysis processes. Combined kinetics three-parallel-reaction (CK-TPR) model fitted the pyrolysis experimental data very well. Reaction mechanisms for pseudo hemicelluloses, cellulose, lignin in CK-TPR model was f(α)=(1-α)(1.6244)α(-0.3371)[-ln(1-α)](-0.0515), f(α)=(1-α)(1.0597)α(-0.6909)[-ln(1-α)](0.9026) and f(α)=(1-α)(2.9577)α(-4.7719), respectively. Apparent activation energy of three pseudo components followed the order of Elignin(197.3kJ/mol)>Ecellulose(176.3kJ/mol)>Ehemicelluloses (151.1kJ/mol). Mechanism of hemicelluloses pyrolysis could be further expressed as f(α)=(1-α)(1.4). The pyrolytic mechanism of cellulose met the Nucleation well. However, mechanism of lignin pyrolysis was complex, which possibly was the combined effects of Nucleation, Diffusion, Geometrical contraction, and Power law. Copyright © 2016 Elsevier Ltd. All rights reserved.

Understanding Product Optimization: Kinetic versus Thermodynamic Control.

ERIC Educational Resources Information Center

Lin, King-Chuen

1988-01-01

Discusses the concept of kinetic versus thermodynamic control of reactions. Explains on the undergraduate level (1) the role of kinetic and thermodynamic control in kinetic equations, (2) the influence of concentration and temperature upon the reaction, and (3) the application of factors one and two to synthetic chemistry. (MVL)

Phase-field Model for Interstitial Loop Growth Kinetics and Thermodynamic and Kinetic Models of Irradiated Fe-Cr Alloys

DOE Office of Scientific and Technical Information (OSTI.GOV)

Li, Yulan; Hu, Shenyang Y.; Sun, Xin

2011-06-15

Microstructure evolution kinetics in irradiated materials has strongly spatial correlation. For example, void and second phases prefer to nucleate and grow at pre-existing defects such as dislocations, grain boundaries, and cracks. Inhomogeneous microstructure evolution results in inhomogeneity of microstructure and thermo-mechanical properties. Therefore, the simulation capability for predicting three dimensional (3-D) microstructure evolution kinetics and its subsequent impact on material properties and performance is crucial for scientific design of advanced nuclear materials and optimal operation conditions in order to reduce uncertainty in operational and safety margins. Very recently the meso-scale phase-field (PF) method has been used to predict gas bubblemore » evolution, void swelling, void lattice formation and void migration in irradiated materials,. Although most results of phase-field simulations are qualitative due to the lake of accurate thermodynamic and kinetic properties of defects, possible missing of important kinetic properties and processes, and the capability of current codes and computers for large time and length scale modeling, the simulations demonstrate that PF method is a promising simulation tool for predicting 3-D heterogeneous microstructure and property evolution, and providing microstructure evolution kinetics for higher scale level simulations of microstructure and property evolution such as mean field methods. This report consists of two parts. In part I, we will present a new phase-field model for predicting interstitial loop growth kinetics in irradiated materials. The effect of defect (vacancy/interstitial) generation, diffusion and recombination, sink strength, long-range elastic interaction, inhomogeneous and anisotropic mobility on microstructure evolution kinetics is taken into account in the model. The model is used to study the effect of elastic interaction on interstitial loop growth kinetics, the interstitial flux

A Gas-Kinetic Scheme for Reactive Flows

NASA Technical Reports Server (NTRS)

Lian,Youg-Sheng; Xu, Kun

1998-01-01

In this paper, the gas-kinetic BGK scheme for the compressible flow equations is extended to chemical reactive flow. The mass fraction of the unburnt gas is implemented into the gas kinetic equation by assigning a new internal degree of freedom to the particle distribution function. The new variable can be also used to describe fluid trajectory for the nonreactive flows. Due to the gas-kinetic BGK model, the current scheme basically solves the Navier-Stokes chemical reactive flow equations. Numerical tests validate the accuracy and robustness of the current kinetic method.

Hindered rotor models with variable kinetic functions for accurate thermodynamic and kinetic predictions

NASA Astrophysics Data System (ADS)

Reinisch, Guillaume; Leyssale, Jean-Marc; Vignoles, Gérard L.

2010-10-01

We present an extension of some popular hindered rotor (HR) models, namely, the one-dimensional HR (1DHR) and the degenerated two-dimensional HR (d2DHR) models, allowing for a simple and accurate treatment of internal rotations. This extension, based on the use of a variable kinetic function in the Hamiltonian instead of a constant reduced moment of inertia, is extremely suitable in the case of rocking/wagging motions involved in dissociation or atom transfer reactions. The variable kinetic function is first introduced in the framework of a classical 1DHR model. Then, an effective temperature and potential dependent constant is proposed in the cases of quantum 1DHR and classical d2DHR models. These methods are finally applied to the atom transfer reaction SiCl3+BCl3→SiCl4+BCl2. We show, for this particular case, that a proper accounting of internal rotations greatly improves the accuracy of thermodynamic and kinetic predictions. Moreover, our results confirm (i) that using a suitably defined kinetic function appears to be very adapted to such problems; (ii) that the separability assumption of independent rotations seems justified; and (iii) that a quantum mechanical treatment is not a substantial improvement with respect to a classical one.

The Einstein-Vlasov System/Kinetic Theory.

PubMed

Andréasson, Håkan

2005-01-01

The main purpose of this article is to provide a guide to theorems on global properties of solutions to the Einstein-Vlasov system. This system couples Einstein's equations to a kinetic matter model. Kinetic theory has been an important field of research during several decades in which the main focus has been on nonrelativistic and special relativistic physics, i.e. to model the dynamics of neutral gases, plasmas, and Newtonian self-gravitating systems. In 1990, Rendall and Rein initiated a mathematical study of the Einstein-Vlasov system. Since then many theorems on global properties of solutions to this system have been established. The Vlasov equation describes matter phenomenologically, and it should be stressed that most of the theorems presented in this article are not presently known for other such matter models (i.e. fluid models). This paper gives introductions to kinetic theory in non-curved spacetimes and then the Einstein-Vlasov system is introduced. We believe that a good understanding of kinetic theory in non-curved spacetimes is fundamental to good comprehension of kinetic theory in general relativity.

The Einstein-Vlasov System/Kinetic Theory.

PubMed

Andréasson, Håkan

2002-01-01

The main purpose of this article is to provide a guide to theorems on global properties of solutions to the Einstein-Vlasov system. This system couples Einstein's equations to a kinetic matter model. Kinetic theory has been an important field of research during several decades in which the main focus has been on nonrelativistic and special relativistic physics, i.e. to model the dynamics of neutral gases, plasmas, and Newtonian self-gravitating systems. In 1990, Rendall and Rein initiated a mathematical study of the Einstein-Vlasov system. Since then many theorems on global properties of solutions to this system have been established. The Vlasov equation describes matter phenomenologically, and it should be stressed that most of the theorems presented in this article are not presently known for other such matter models (i.e. fluid models). This paper gives introductions to kinetic theory in non-curved spacetimes and then the Einstein-Vlasov system is introduced. We believe that a good understanding of kinetic theory in non-curved spacetimes is fundamental to good comprehension of kinetic theory in general relativity.

Kinetics and photochemistry Golden, D. M.

NASA Technical Reports Server (NTRS)

Demore, W. B.; Golden, R. F.; Howard, C. J.; Kurylo, M. J.; Margitan, J. J.; Molina, M. J.; Ravishankara, A. R.; Watson, R. T.; Hampson, R. F.

1985-01-01

The data for chemical kinetics rate constants and photochemical cross sections taken from a compilation prepared in early 1985, entitled Chemical Kinetics and Photochemical Data for Use in Stratospheric Modeling, is presented.

[Kinetics of decamethoxine, an antimicrobial agent].

PubMed

Paliĭ, G K; Nazarchuk, A A; Kulakov, A I; Nazarchuk, G G; Paliĭ, D V; Bereza, B N; Oleĭnik, D P

2014-01-01

The kinetics of decamethoxine liberation from medical antimicrobial textiles was studied. The elution of decamethoxine was shown to be a complicated diffusive-kinetic process dependent on the exposure and concentration of decamethoxine.

Calcite Dissolution Kinetics

NASA Astrophysics Data System (ADS)

Berelson, W.; Subhas, A.; Dong, S.; Naviaux, J.; Adkins, J. F.

2016-12-01

A geological buffer for high atmospheric CO2 concentrations is neutralization via reaction with CaCO3. We have been studying the dissolution kinetics of carbonate minerals using labeled 13C calcite and Picarro-based measurements of 13C enrichments in solution DIC. This methodology has greatly facilitated our investigation of dissolution kinetics as a function of water carbonate chemistry, temperature and pressure. One can adjust the saturation state Omega by changing the ion activity product (e.g. adjusting carbonate ion concentration), or by changing the solubility product (e.g. adjusting temperature or pressure). The canonical formulation of dissolution rate vs. omega has been refined (Subhas et al. 2015) and shows distinct non-linear behavior near equilibrium and rates in sea water of 1-3 e-6 g/cm2day at omega = 0.8. Carbonic anhydrase (CA), an enzyme that catalyzes the hydration of dissolved CO2 to carbonic acid, was shown (in concentrations <=0.04 g/L) to enhance the dissolution rate at low degrees of undersaturation by >500x. This result points to the importance of carbonic acid in enhancing dissolution at low degrees of undersaturation. CA activity and abundance in nature must be considered regarding the role it plays in catalyzing dissolution. We also have been investigating the role of temperature on dissolution kinetics. An increase of 16C yields an order of magnitude increase in dissolution rate. Temperature (and P) also change Omega critical, the saturation state where dissolution rates change substantially. Increasing pressure (achieved in a pressure reaction chamber we built) also shifts Omega critical closer to equilibrium and small pressure increases have large impact on dissolution kinetics. Dissolution rates are enhanced by an order of magnitude for a change in pressure of 1500 psi relative to the dissolution rate achieved by water chemistry effects alone for an omega of 0.8. We've shown that the thermodynamic determination of saturation state

Kinetic Folding Mechanism of Erythropoietin

PubMed Central

Banks, Douglas D.; Scavezze, Joanna L.; Siska, Christine C.

2009-01-01

This report describes what to our knowledge is the first kinetic folding studies of erythropoietin, a glycosylated four-helical bundle cytokine responsible for the regulation of red blood cell production. Kinetic responses for folding and unfolding reactions initiated by manual mixing were monitored by far-ultraviolet circular dichroism and fluorescence spectroscopy, and folding reactions initiated by stopped-flow mixing were monitored by fluorescence. The urea concentration dependence of the observed kinetics were best described by a three-state model with a transiently populated intermediate species that is on-pathway and obligatory. This folding scheme was further supported by the excellent agreement between the free energy of unfolding and m-value calculated from the microscopic rate constants derived from this model and these parameters determined from separate equilibrium unfolding experiments. Compared to the kinetics of other members of the four-helical bundle cytokine family, erythropoietin folding and unfolding reactions were slower and less susceptible to aggregation. We tentatively attribute these slower rates and protection from association events to the large amount of carbohydrate attached to erythropoietin at four sites. PMID:19450492

Spectral method for a kinetic swarming model

DOE PAGES

Gamba, Irene M.; Haack, Jeffrey R.; Motsch, Sebastien

2015-04-28

Here we present the first numerical method for a kinetic description of the Vicsek swarming model. The kinetic model poses a unique challenge, as there is a distribution dependent collision invariant to satisfy when computing the interaction term. We use a spectral representation linked with a discrete constrained optimization to compute these interactions. To test the numerical scheme we investigate the kinetic model at different scales and compare the solution with the microscopic and macroscopic descriptions of the Vicsek model. Lastly, we observe that the kinetic model captures key features such as vortex formation and traveling waves.

Oxidative desulfurization: kinetic modelling.

PubMed

Dhir, S; Uppaluri, R; Purkait, M K

2009-01-30

Increasing environmental legislations coupled with enhanced production of petroleum products demand, the deployment of novel technologies to remove organic sulfur efficiently. This work represents the kinetic modeling of ODS using H(2)O(2) over tungsten-containing layered double hydroxide (LDH) using the experimental data provided by Hulea et al. [V. Hulea, A.L. Maciuca, F. Fajula, E. Dumitriu, Catalytic oxidation of thiophenes and thioethers with hydrogen peroxide in the presence of W-containing layered double hydroxides, Appl. Catal. A: Gen. 313 (2) (2006) 200-207]. The kinetic modeling approach in this work initially targets the scope of the generation of a superstructure of micro-kinetic reaction schemes and models assuming Langmuir-Hinshelwood (LH) and Eley-Rideal (ER) mechanisms. Subsequently, the screening and selection of above models is initially based on profile-based elimination of incompetent schemes followed by non-linear regression search performed using the Levenberg-Marquardt algorithm (LMA) for the chosen models. The above analysis inferred that Eley-Rideal mechanism describes the kinetic behavior of ODS process using tungsten-containing LDH, with adsorption of reactant and intermediate product only taking place on the catalyst surface. Finally, an economic index is presented that scopes the economic aspects of the novel catalytic technology with the parameters obtained during regression analysis to conclude that the cost factor for the catalyst is 0.0062-0.04759 US $ per barrel.

Kinetic Activation-Relaxation Technique and Self-Evolving Atomistic Kinetic Monte Carlo: Comparison of on-the-fly kinetic Monte Carlo algorithms

DOE PAGES

Beland, Laurent Karim; Osetskiy, Yury N.; Stoller, Roger E.; ...

2015-02-07

Here, we present a comparison of the Kinetic Activation–Relaxation Technique (k-ART) and the Self-Evolving Atomistic Kinetic Monte Carlo (SEAKMC), two off-lattice, on-the-fly Kinetic Monte Carlo (KMC) techniques that were recently used to solve several materials science problems. We show that if the initial displacements are localized the dimer method and the Activation–Relaxation Technique nouveau provide similar performance. We also show that k-ART and SEAKMC, although based on different approximations, are in agreement with each other, as demonstrated by the examples of 50 vacancies in a 1950-atom Fe box and of interstitial loops in 16,000-atom boxes. Generally speaking, k-ART’s treatment ofmore » geometry and flickers is more flexible, e.g. it can handle amorphous systems, and rigorous than SEAKMC’s, while the later’s concept of active volumes permits a significant speedup of simulations for the systems under consideration and therefore allows investigations of processes requiring large systems that are not accessible if not localizing calculations.« less

Kinetic bridges.

DOT National Transportation Integrated Search

1980-01-01

This report on kinetic bridges is essentially a state-of-the-art study on two types of bridges whose location or physical characteristics are designed to be time dependent. The first type, called a "relocatable bridge", is essentially for use as a te...

Satellite Altimetry And Radiometry for Inland Hydrology, Coastal Sea-Level And Environmental Studies

NASA Astrophysics Data System (ADS)

Tseng, Kuo-Hsin

In this study, we demonstrate three environmental-related applications employing altimetry and remote sensing satellites, and exemplify the prospective usage underlying the current progressivity in mechanical and data analyzing technologies. Our discussion starts from the improved waveform retracking techniques in need for altimetry measurements over coastal and inland water regions. We developed two novel auxiliary procedures, namely the Subwaveform Filtering (SF) method and the Track Offset Correction (TOC), for waveform retracking algorithms to operationally detect altimetry waveform anomalies and further reduce possible errors in determination of the track offset. After that, we present two demonstrative studies related to the ionospheric and tropospheric compositions, respectively, as their variations are the important error sources for satellite electromagnetic signals. We firstly compare the total electron content (TEC) measured by multiple altimetry and GNSS sensors. We conclude that the ionosphere delay measured by Jason-2 is about 6-10 mm shorter than the GPS models. On the other hand, we use several atmospheric variables to study the climate change over high elevation areas. Five types of satellite data and reanalysis models were used to study climate change indicators. We conclude that the spatial distribution of temperature trend among data products is quite different, which is probably due to the choice of various time spans. Following discussions about the measuring techniques and relative bias between data products, we applied our improved altimetry techniques to three environmental science applications with helps of remote sensing imagery. We first manifest the detectability of hydrological events by satellite altimetry and radiometry. The characterization of one-dimensional (along-track) water boundary using former Backscattering Coefficient (BC) method is assisted by the two-dimensional (horizontal) estimate of water extent using the Moderate

Illusory displacement of equiluminous kinetic edges.

PubMed

Ramachandran, V S; Anstis, S M

1990-01-01

A stationary window was cut out of a stationary random-dot pattern. When a field of dots was moved continuously behind the window (a) the window appeared to move in the same direction even though it was stationary, (b) the position of the 'kinetic edges' defining the window was also displaced along the direction of dot motion, and (c) the edges of the window tended to fade on steady fixation even though the dots were still clearly visible. The illusory displacement was enhanced considerably if the kinetic edge was equiluminous and if the 'window' region was seen as 'figure' rather than 'ground'. Since the extraction of kinetic edges probably involves the use of direction-selective cells, the illusion may provide insights into how the visual system uses the output of these cells to localize the kinetic edges.

Kelvin wave coupling from TIMED and GOCE: Inter/intra-annual variability and solar activity effects

NASA Astrophysics Data System (ADS)

Gasperini, Federico; Forbes, Jeffrey M.; Doornbos, Eelco N.; Bruinsma, Sean L.

2018-06-01

The primary mechanism through which energy and momentum are transferred from the lower atmosphere to the thermosphere is through the generation and propagation of atmospheric waves. It is becoming increasingly evident that a few waves from the tropical wave spectrum preferentially propagate into the thermosphere and contribute to modify satellite drag. Two of the more prominent and well-established tropical waves are Kelvin waves: the eastward-propagating 3-day ultra-fast Kelvin wave (UFKW) and the eastward-propagating diurnal tide with zonal wave number 3 (DE3). In this work, Sounding of the Atmosphere using Broadband Emission Radiometry (SABER) temperatures at 110 km and Gravity field and steady-state Ocean Circulation Explorer (GOCE) neutral densities and cross-track winds near 260 km are used to demonstrate vertical coupling in this height regime due to the UFKW and DE3. Significant inter- and intra-annual variability is found in DE3 and the UFKW, with evidence of latitudinal broadening and filtering of the latitude structures with height due to the effect of dissipation and mean winds. Additionally, anti-correlation between the vertical penetration of these waves to the middle thermosphere and solar activity level is established and explained through the effect of molecular dissipation.

Hemispheric differences in PMC altitudes observed by the AIM satellite for the 2007/2008 seasons

NASA Astrophysics Data System (ADS)

Russell, J. M.; Bailey, S. M.; Gordley, L. L.; Hervig, M. E.; Stevens, M. H.; Thomas, G. E.; Rong, P.

2008-05-01

The Aeronomy of Ice in the Mesosphere (AIM) mission was launched from Vandenberg Air Force Base in California at 1:26:03 PDT on April 25, 2007 becoming the first satellite mission dedicated to the study of noctilucent clouds. A Pegasus XL rocket launched the satellite into a near perfect 600 km sun synchronous circular orbit providing an ideal injection for conducting AIM science studies. This paper focuses on hemispheric differences in polar mesospheric cloud (PMC) altitudes observed by the Solar Occultation For Ice Experiment (SOFIE) for the 2007 northern hemisphere season and the 2007/2008 southern hemisphere season. Results show PMC peak altitude differences of 1 km to 3 km depending on time in the season which is larger than previous ground-based and satellite results (~1 km). SOFIE data show that altitude differences are dependent on time within the season and that the differences are correlated with mesopause height. Sounding of the Atmosphere using Broadband Emission Radiometry (SABER) temperature data measured from the TIMED satellite over the 2003 to 2007 period show that hemispheric differences in the summer mesopause height were unusually large for part of the 2007 PMC season, consistent with the 3 km height difference in PMCs during that time.

Statistical analysis of solar wind stream interface induced temperature effects on the upper mesosphere and lower thermosphere over SANAE IV, Antarctica

NASA Astrophysics Data System (ADS)

Ogunjobi, Olakunle; Sivakumar, Venkataraman; William; Sivla, T.

Using superposed epoch techniques, the TIMED (Thermosphere Ionosphere Mesosphere Energetic and Dynamics) and NOAA 15-18 (National Oceanic and Atmospheric Administration) satellites measurements are used to examine the response of the polar MLT (Mesosphere and Lower Thermosphere) temperature to energetic electron precipitation during solar wind stream interfaces (SI). We first investigate the relationship between the ionospheric absorption from the ground based riometer and degree of energetic electron precipitation from the MEPED (Medium Energy Proton and Electron Detectors) on board the NOAA satellites. By interpolating the energetic electron measurements from MEPED instruments, we can obtain the electron precipitation rates close in time to the SABER (Sounding of the Atmosphere using Broadband Emission Radiometry) temperature retrieval. Using measurements sorted over the vicinity of SANAE IV (South Africa National Antarctic Expedition IV), we investigate if there are significant temperature effects in the MLT altitude on SI arrival at Earth. The preliminary analysis indicate that there are no temperature increase below 100 km prior to the SI triggered precipitation; whereas a clear temperature increase is observed at 95 km immediately after the SI impact. The analysis on the SI geophysical properties indicates that an enhanced magnetospheric convection resulting to heating could be responsible for the temperature modification on SI arrival.

Kinetics of bacterial phospholipase C activity at micellar interfaces: effect of substrate aggregate microstructure and a model for the kinetic parameters.

PubMed

Singh, Jasmeet; Ranganathan, Radha; Hajdu, Joseph

2008-12-25

Activity at micellar interfaces of bacterial phospholipase C from Bacillus cereus on phospholipids solubilized in micelles was investigated with the goal of elucidating the role of the interface microstructure and developing further an existing kinetic model. Enzyme kinetics and physicochemical characterization of model substrate aggregates were combined, thus enabling the interpretation of kinetics in the context of the interface. Substrates were diacylphosphatidylcholine of different acyl chain lengths in the form of mixed micelles with dodecyldimethylammoniopropanesulfonate. An early kinetic model, reformulated to reflect the interfacial nature of the kinetics, was applied to the kinetic data. A better method of data treatment is proposed, use of which makes the presence of microstructure effects quite transparent. Models for enzyme-micelle binding and enzyme-lipid binding are developed, and expressions incorporating the microstructural properties are derived for the enzyme-micelle dissociation constant K(s) and the interface Michaelis-Menten constant, K(M). Use of these expressions in the interface kinetic model brings excellent agreement between the kinetic data and the model. Numerical values for the thermodynamic and kinetic parameters are determined. Enzyme-lipid binding is found to be an activated process with an acyl chain length dependent free energy of activation that decreases with micelle lipid molar fraction with a coefficient of about -15RT and correlates with the tightness of molecular packing in the substrate aggregate. Thus, the physical insight obtained includes a model for the kinetic parameters that shows that these parameters depend on the substrate concentration and acyl chain length of the lipid. Enzyme-micelle binding is indicated to be hydrophobic and solvent mediated with a dissociation constant of 1.2 mM.

FOREWORD: The 9th International Conference on New Developments and Applications in Optical Radiometry (NEWRAD 2005)

NASA Astrophysics Data System (ADS)

Gröbner, Julian; Ikonen, Erkki

2006-04-01

The ninth NEWRAD Conference was held in Davos, Switzerland, between 16 and 19 October 2005. The Conference was organized by the Physikalisch- Meteorologisches Observatorium Davos, World Radiation Center (PMOD/WRC). The Conference was attended by 169 participants from five continents, which makes it the largest NEWRAD conference to date. The NEWRAD Conference followed the 10th international pyrheliometer comparison IPC-X, which is held every five years at PMOD/WRC. In addition, the 6th UVnet Workshop was held in connection with the NEWRAD Conference on 20 and 21 October. The NEWRAD Conference brings together people from the national metrology institutes and the principal user communities of advanced radiometry, including meteorological and remote-sensing communities. A total of 153 papers were presented, of which eight were keynote or invited talks, and there were 105 posters. Coffee breaks and extended lunch breaks created a stimulating atmosphere for lively discussions and exchange of ideas. Notwithstanding the excellent weather and the tantalizing surroundings of Davos, most participants managed to attend the poster sessions, which were organized during the noon lunch breaks. The conference proceedings can be downloaded from the NEWRAD 2005 website at www.pmodwrc.ch/newrad2005/pdfabstracts/Newrad_Proceedings_2005_A7.pdf. For this and future conferences, a new policy was adopted to publish a selected number of contributions in a special issue of Metrologia. The purpose of the change is to increase the overall impact of this journal. The NEWRAD Scientific Committee invited the contributions to this special issue on the basis of the quality of the extended abstracts, and later the submitted manuscripts were reviewed by the Committee members. On behalf of the Scientific Committee and all the participants, one of us (EI) wishes to thank Werner Schmutz and his colleagues from the Local Organizing Committee for arranging an excellent conference in the beautiful city of

Influence of the Sampling Rate and Noise Characteristics on Prediction of the Maximal Safe Laser Exposure in Human Skin Using Pulsed Photothermal Radiometry

NASA Astrophysics Data System (ADS)

Vidovič, L.; Milanič, M.; Majaron, B.

2013-09-01

Pulsed photothermal radiometry (PPTR) allows for noninvasive determination of the laser-induced temperature depth profile in strongly scattering samples, including human skin. In a recent experimental study, we have demonstrated that such information can be used to derive rather accurate predictions of the maximal safe radiant exposure on an individual patient basis. This has important implications for efficacy and safety of several laser applications in dermatology and aesthetic surgery, which are often compromised by risk of adverse side effects (e.g., scarring, and dyspigmentation) resulting from nonselective absorption of strong laser light in epidermal melanin. In this study, the differences between the individual maximal safe radiant exposure values as predicted from PPTR temperature depth profiling performed using a commercial mid-IR thermal camera (as used to acquire the original patient data) and our customized PPTR setup are analyzed. To this end, the latter has been used to acquire 17 PPTR records from three healthy volunteers, using 1 ms laser irradiation at 532 nm and a signal sampling rate of 20 000 . The laser-induced temperature profiles are reconstructed first from the intact PPTR signals, and then by binning the data to imitate the lower sampling rate of the IR camera (1000 fps). Using either the initial temperature profile in a dedicated numerical model of heat transfer or protein denaturation dynamics, the predicted levels of epidermal thermal damage and the corresponding are compared. A similar analysis is performed also with regard to the differences between noise characteristics of the two PPTR setups.

Hybrid Parallelization of Adaptive MHD-Kinetic Module in Multi-Scale Fluid-Kinetic Simulation Suite

DOE PAGES

Borovikov, Sergey; Heerikhuisen, Jacob; Pogorelov, Nikolai

2013-04-01

The Multi-Scale Fluid-Kinetic Simulation Suite has a computational tool set for solving partially ionized flows. In this paper we focus on recent developments of the kinetic module which solves the Boltzmann equation using the Monte-Carlo method. The module has been recently redesigned to utilize intra-node hybrid parallelization. We describe in detail the redesign process, implementation issues, and modifications made to the code. Finally, we conduct a performance analysis.

A Simple "Boxed Molecular Kinetics" Approach To Accelerate Rare Events in the Stochastic Kinetic Master Equation.

PubMed

Shannon, Robin; Glowacki, David R

2018-02-15

The chemical master equation is a powerful theoretical tool for analyzing the kinetics of complex multiwell potential energy surfaces in a wide range of different domains of chemical kinetics spanning combustion, atmospheric chemistry, gas-surface chemistry, solution phase chemistry, and biochemistry. There are two well-established methodologies for solving the chemical master equation: a stochastic "kinetic Monte Carlo" approach and a matrix-based approach. In principle, the results yielded by both approaches are identical; the decision of which approach is better suited to a particular study depends on the details of the specific system under investigation. In this Article, we present a rigorous method for accelerating stochastic approaches by several orders of magnitude, along with a method for unbiasing the accelerated results to recover the "true" value. The approach we take in this paper is inspired by the so-called "boxed molecular dynamics" (BXD) method, which has previously only been applied to accelerate rare events in molecular dynamics simulations. Here we extend BXD to design a simple algorithmic strategy for accelerating rare events in stochastic kinetic simulations. Tests on a number of systems show that the results obtained using the BXD rare event strategy are in good agreement with unbiased results. To carry out these tests, we have implemented a kinetic Monte Carlo approach in MESMER, which is a cross-platform, open-source, and freely available master equation solver.

Kinetic Model of Growth of Arthropoda Populations

NASA Astrophysics Data System (ADS)

Ershov, Yu. A.; Kuznetsov, M. A.

2018-05-01

Kinetic equations were derived for calculating the growth of crustacean populations ( Crustacea) based on the biological growth model suggested earlier using shrimp ( Caridea) populations as an example. The development cycle of successive stages for populations can be represented in the form of quasi-chemical equations. The kinetic equations that describe the development cycle of crustaceans allow quantitative prediction of the development of populations depending on conditions. In contrast to extrapolation-simulation models, in the developed kinetic model of biological growth the kinetic parameters are the experimental characteristics of population growth. Verification and parametric identification of the developed model on the basis of the experimental data showed agreement with experiment within the error of the measurement technique.

Kinetic theory of Lennard-Jones fluids

NASA Astrophysics Data System (ADS)

Leegwater, Jan A.

1991-12-01

A kinetic theory that describes the time evolution of a fluid consisting of Lennard-Jones particles at all densities is proposed. The kinetic equation assumes binary collisions, but takes into account the finite time duration of a collision. Furthermore, it is an extension of a kinetic equation for the square well fluid as well as the hard sphere Enskog theory. In the low density limit, the Boltzmann theory is obtained. It is shown that the proposed theory obeys all the conservation laws. The exchange of potential and kinetic energies is studied and it is shown that at high density this is a fast process. The dominant mechanism for energy exchange is found to be collisions at the strongly repulsive part of the potential that are disturbed by third particles. The kinetic equation is also used to calculate the Green-Kubo integrands for shear viscosity and heat conductivity. The major structures found in molecular dynamics simulations are reproduced at intermediate densities quantitatively and at high density semiquantitatively. It is found that at high density, not only correlated collisions have to be taken into account, but that even the concept of collisions in the sense of sudden changes in the velocity is no longer useful.

Stochastic kinetic mean field model

NASA Astrophysics Data System (ADS)

Erdélyi, Zoltán; Pasichnyy, Mykola; Bezpalchuk, Volodymyr; Tomán, János J.; Gajdics, Bence; Gusak, Andriy M.

2016-07-01

This paper introduces a new model for calculating the change in time of three-dimensional atomic configurations. The model is based on the kinetic mean field (KMF) approach, however we have transformed that model into a stochastic approach by introducing dynamic Langevin noise. The result is a stochastic kinetic mean field model (SKMF) which produces results similar to the lattice kinetic Monte Carlo (KMC). SKMF is, however, far more cost-effective and easier to implement the algorithm (open source program code is provided on http://skmf.eu website). We will show that the result of one SKMF run may correspond to the average of several KMC runs. The number of KMC runs is inversely proportional to the amplitude square of the noise in SKMF. This makes SKMF an ideal tool also for statistical purposes.

Space Opportunities for Tropospheric Chemistry Research

NASA Technical Reports Server (NTRS)

Levine, Joel S. (Editor)

1987-01-01

The objective of this workshop was to assess future technological and scientific directions for measurements of tropospheric trace gases and aerosols from space. Various instrument technologies were considered including spectrometry, gas correlation filter radiometry, spectral radiometry, and lidar.

Wave kinetics of random fibre lasers

PubMed Central

Churkin, D V.; Kolokolov, I V.; Podivilov, E V.; Vatnik, I D.; Nikulin, M A.; Vergeles, S S.; Terekhov, I S.; Lebedev, V V.; Falkovich, G.; Babin, S A.; Turitsyn, S K.

2015-01-01

Traditional wave kinetics describes the slow evolution of systems with many degrees of freedom to equilibrium via numerous weak non-linear interactions and fails for very important class of dissipative (active) optical systems with cyclic gain and losses, such as lasers with non-linear intracavity dynamics. Here we introduce a conceptually new class of cyclic wave systems, characterized by non-uniform double-scale dynamics with strong periodic changes of the energy spectrum and slow evolution from cycle to cycle to a statistically steady state. Taking a practically important example—random fibre laser—we show that a model describing such a system is close to integrable non-linear Schrödinger equation and needs a new formalism of wave kinetics, developed here. We derive a non-linear kinetic theory of the laser spectrum, generalizing the seminal linear model of Schawlow and Townes. Experimental results agree with our theory. The work has implications for describing kinetics of cyclical systems beyond photonics. PMID:25645177

Kinetic Tremor

PubMed Central

Louis, Elan D.

2007-01-01

Tremor is among the acute effects of nicotine exposure. Published studies have focused on smoking-related postural (static) hand tremor rather than kinetic tremor (tremor during hand use), and gender differences in smoking-related tremor have not been examined. In a group of adults who were sampled from a population (mean ± SD = 65.7 ± 11.5 years, range = 18 - 92 years), the investigator assessed whether the severity of postural and kinetic tremors differed in smokers versus non-smokers, and whether this difference was influenced by gender. Twenty-seven (9.9%) of 273 subjects were current smokers. Greater tremor was observed in smokers than non-smokers during a variety of activities (drawing a spiral, using a spoon, finger-nose-finger maneuver, all p < 0.05) and smokers had a higher total tremor score than non-smokers (5.15 ± 3.06 vs. 3.41 ± 2.88, p < 0.01), even after adjusting for age, caffeine intake and other potential confounding factors. The difference between smokers and non-smokers in terms of hand tremor was more apparent in women than in men. In women, the number of cigarettes smoked on the day of testing was weakly correlated with the total tremor score (r = 0.17, p = 0.03). In summary, smokers had more kinetic hand tremor than non-smokers. This difference between smokers and non-smokers was more apparent in women than in men. These results suggest that smoking habits should be considered carefully in order to avoid over- or underestimating the effects of occupational and non-occupational exposures to other tremor-producing neurotoxins. PMID:17267044

Thermal oxidative degradation kinetics of agricultural residues using distributed activation energy model and global kinetic model.

PubMed

Ren, Xiu'e; Chen, Jianbiao; Li, Gang; Wang, Yanhong; Lang, Xuemei; Fan, Shuanshi

2018-08-01

The study concerned the thermal oxidative degradation kinetics of agricultural residues, peanut shell (PS) and sunflower shell (SS). The thermal behaviors were evaluated via thermogravimetric analysis and the kinetic parameters were determined by using distributed activation energy model (DAEM) and global kinetic model (GKM). Results showed that thermal oxidative decomposition of two samples processed in three zones; the ignition, burnout, and comprehensive combustibility between two agricultural residues were of great difference; and the combustion performance could be improved by boosting heating rate. The activation energy ranges calculated by the DAEM for the thermal oxidative degradation of PS and SS were 88.94-145.30 kJ mol -1 and 94.86-169.18 kJ mol -1 , respectively. The activation energy obtained by the GKM for the oxidative decomposition of hemicellulose and cellulose was obviously lower than that for the lignin oxidation at identical heating rate. To some degree, the determined kinetic parameters could acceptably simulate experimental data. Copyright © 2018 Elsevier Ltd. All rights reserved.

The initial value problem in Lagrangian drift kinetic theory

NASA Astrophysics Data System (ADS)

Burby, J. W.

2016-06-01

> Existing high-order variational drift kinetic theories contain unphysical rapidly varying modes that are not seen at low orders. These unphysical modes, which may be rapidly oscillating, damped or growing, are ushered in by a failure of conventional high-order drift kinetic theory to preserve the structure of its parent model's initial value problem. In short, the (infinite dimensional) system phase space is unphysically enlarged in conventional high-order variational drift kinetic theory. I present an alternative, `renormalized' variational approach to drift kinetic theory that manifestly respects the parent model's initial value problem. The basic philosophy underlying this alternate approach is that high-order drift kinetic theory ought to be derived by truncating the all-orders system phase-space Lagrangian instead of the usual `field particle' Lagrangian. For the sake of clarity, this story is told first through the lens of a finite-dimensional toy model of high-order variational drift kinetics; the analogous full-on drift kinetic story is discussed subsequently. The renormalized drift kinetic system, while variational and just as formally accurate as conventional formulations, does not support the troublesome rapidly varying modes.

Analysis of a kinetic multi-segment foot model part II: kinetics and clinical implications.

PubMed

Bruening, Dustin A; Cooney, Kevin M; Buczek, Frank L

2012-04-01

Kinematic multi-segment foot models have seen increased use in clinical and research settings, but the addition of kinetics has been limited and hampered by measurement limitations and modeling assumptions. In this second of two companion papers, we complete the presentation and analysis of a three segment kinetic foot model by incorporating kinetic parameters and calculating joint moments and powers. The model was tested on 17 pediatric subjects (ages 7-18 years) during normal gait. Ground reaction forces were measured using two adjacent force platforms, requiring targeted walking and the creation of two sub-models to analyze ankle, midtarsal, and 1st metatarsophalangeal joints. Targeted walking resulted in only minimal kinematic and kinetic differences compared with walking at self selected speeds. Joint moments and powers were calculated and ensemble averages are presented as a normative database for comparison purposes. Ankle joint powers are shown to be overestimated when using a traditional single-segment foot model, as substantial angular velocities are attributed to the mid-tarsal joint. Power transfer is apparent between the 1st metatarsophalangeal and mid-tarsal joints in terminal stance/pre-swing. While the measurement approach presented here is limited to clinical populations with only minimal impairments, some elements of the model can also be incorporated into routine clinical gait analysis. Copyright © 2011 Elsevier B.V. All rights reserved.

Kinetic modeling of cell metabolism for microbial production.

PubMed

Costa, Rafael S; Hartmann, Andras; Vinga, Susana

2016-02-10

Kinetic models of cellular metabolism are important tools for the rational design of metabolic engineering strategies and to explain properties of complex biological systems. The recent developments in high-throughput experimental data are leading to new computational approaches for building kinetic models of metabolism. Herein, we briefly survey the available databases, standards and software tools that can be applied for kinetic models of metabolism. In addition, we give an overview about recently developed ordinary differential equations (ODE)-based kinetic models of metabolism and some of the main applications of such models are illustrated in guiding metabolic engineering design. Finally, we review the kinetic modeling approaches of large-scale networks that are emerging, discussing their main advantages, challenges and limitations. Copyright © 2015 Elsevier B.V. All rights reserved.

Kinetic energy and quasi-biennial oscillation.

NASA Technical Reports Server (NTRS)

Miller, A. J.

1971-01-01

The modulation of the vertical flux of kinetic energy to the stratosphere by the pressure-work effect at 100 mb is compared with variations in the hemispheric kinetic energy, the horizontal momentum and heat transports at 'low' latitudes, and the tropical zonal wind and temperature for the lower stratosphere. It is deduced that the variation of the vertical flux of geopotential is in phase with the kinetic energy in the lower stratosphere and is statistically related to the time rate of change of the horizontal transports of heat and momentum at 30 N. The association of these results to the general circulation of the lower stratosphere is considered.

Virus Neutralisation: New Insights from Kinetic Neutralisation Curves

PubMed Central

Magnus, Carsten

2013-01-01

Antibodies binding to the surface of virions can lead to virus neutralisation. Different theories have been proposed to determine the number of antibodies that must bind to a virion for neutralisation. Early models are based on chemical binding kinetics. Applying these models lead to very low estimates of the number of antibodies needed for neutralisation. In contrast, according to the more conceptual approach of stoichiometries in virology a much higher number of antibodies is required for virus neutralisation by antibodies. Here, we combine chemical binding kinetics with (virological) stoichiometries to better explain virus neutralisation by antibody binding. This framework is in agreement with published data on the neutralisation of the human immunodeficiency virus. Knowing antibody reaction constants, our model allows us to estimate stoichiometrical parameters from kinetic neutralisation curves. In addition, we can identify important parameters that will make further analysis of kinetic neutralisation curves more valuable in the context of estimating stoichiometries. Our model gives a more subtle explanation of kinetic neutralisation curves in terms of single-hit and multi-hit kinetics. PMID:23468602

Variability of Grip Kinetics during Adult Signature Writing

PubMed Central

Ghali, Bassma; Thalanki Anantha, Nayanashri; Chan, Jennifer; Chau, Tom

2013-01-01

Grip kinetics and their variation are emerging as important considerations in the clinical assessment of handwriting pathologies, fine motor rehabilitation, biometrics, forensics and ergonomic pen design. This study evaluated the intra- and inter-participant variability of grip shape kinetics in adults during signature writing. Twenty (20) adult participants wrote on a digitizing tablet using an instrumented pen that measured the forces exerted on its barrel. Signature samples were collected over 10 days, 3 times a day, to capture temporal variations in grip shape kinetics. A kinetic topography (i.e., grip shape image) was derived per signature by time-averaging the measured force at each of 32 locations around the pen barrel. The normalized cross correlations (NCC) of grip shape images were calculated within- and between-participants. Several classification algorithms were implemented to gauge the error rate of participant discrimination based on grip shape kinetics. Four different grip shapes emerged and several participants made grip adjustments (change in grip shape or grip height) or rotated the pen during writing. Nonetheless, intra-participant variation in grip kinetics was generally much smaller than inter-participant force variations. Using the entire grip shape images as a 32-dimensional input feature vector, a K-nearest neighbor classifier achieved an error rate of % in discriminating among participants. These results indicate that writers had unique grip shape kinetics that were repeatable over time but distinct from those of other participants. The topographic analysis of grip kinetics may inform the development of personalized interventions or customizable grips in clinical and industrial applications, respectively. PMID:23658812

Variability of grip kinetics during adult signature writing.

PubMed

Ghali, Bassma; Thalanki Anantha, Nayanashri; Chan, Jennifer; Chau, Tom

2013-01-01

Grip kinetics and their variation are emerging as important considerations in the clinical assessment of handwriting pathologies, fine motor rehabilitation, biometrics, forensics and ergonomic pen design. This study evaluated the intra- and inter-participant variability of grip shape kinetics in adults during signature writing. Twenty (20) adult participants wrote on a digitizing tablet using an instrumented pen that measured the forces exerted on its barrel. Signature samples were collected over 10 days, 3 times a day, to capture temporal variations in grip shape kinetics. A kinetic topography (i.e., grip shape image) was derived per signature by time-averaging the measured force at each of 32 locations around the pen barrel. The normalized cross correlations (NCC) of grip shape images were calculated within- and between-participants. Several classification algorithms were implemented to gauge the error rate of participant discrimination based on grip shape kinetics. Four different grip shapes emerged and several participants made grip adjustments (change in grip shape or grip height) or rotated the pen during writing. Nonetheless, intra-participant variation in grip kinetics was generally much smaller than inter-participant force variations. Using the entire grip shape images as a 32-dimensional input feature vector, a K-nearest neighbor classifier achieved an error rate of 1.2±0.4% in discriminating among participants. These results indicate that writers had unique grip shape kinetics that were repeatable over time but distinct from those of other participants. The topographic analysis of grip kinetics may inform the development of personalized interventions or customizable grips in clinical and industrial applications, respectively.

Large-N kinetic theory for highly occupied systems

NASA Astrophysics Data System (ADS)

Walz, R.; Boguslavski, K.; Berges, J.

2018-06-01

We consider an effective kinetic description for quantum many-body systems, which is not based on a weak-coupling or diluteness expansion. Instead, it employs an expansion in the number of field components N of the underlying scalar quantum field theory. Extending previous studies, we demonstrate that the large-N kinetic theory at next-to-leading order is able to describe important aspects of highly occupied systems, which are beyond standard perturbative kinetic approaches. We analyze the underlying quasiparticle dynamics by computing the effective scattering matrix elements analytically and solve numerically the large-N kinetic equation for a highly occupied system far from equilibrium. This allows us to compute the universal scaling form of the distribution function at an infrared nonthermal fixed point within a kinetic description, and we compare to existing lattice field theory simulation results.

Kinetic energy budgets in areas of intense convection

NASA Technical Reports Server (NTRS)

Fuelberg, H. E.; Berecek, E. M.; Ebel, D. M.; Jedlovec, G. J.

1980-01-01

A kinetic energy budget analysis of the AVE-SESAME 1 period which coincided with the deadly Red River Valley tornado outbreak is presented. Horizontal flux convergence was found to be the major kinetic energy source to the region, while cross contour destruction was the major sink. Kinetic energy transformations were dominated by processes related to strong jet intrusion into the severe storm area. A kinetic energy budget of the AVE 6 period also is presented. The effects of inherent rawinsonde data errors on widely used basic kinematic parameters, including velocity divergence, vorticity advection, and kinematic vertical motion are described. In addition, an error analysis was performed in terms of the kinetic energy budget equation. Results obtained from downward integration of the continuity equation to obtain kinematic values of vertical motion are described. This alternate procedure shows promising results in severe storm situations.

Understanding and Forecasting Upper Atmosphere Nitric Oxide Through Data Mining Analysis of TIMED/SABER Data

NASA Astrophysics Data System (ADS)

Flynn, S.; Knipp, D. J.; Matsuo, T.; Mlynczak, M. G.; Hunt, L. A.

2017-12-01

Storm time energy input to the upper atmosphere is countered by infrared radiative emissions from nitric oxide (NO). The temporal profile of these energy sources and losses strongly control thermospheric density profiles, which in turn affect the drag experienced by low Earth orbiting satellites. Storm time processes create NO. In some extreme cases an overabundance of NO emissions unexpectedly decreases atmospheric temperature and density to lower than pre-storm values. Quantifying the spatial and temporal variability of the NO emissions using eigenmodes will increase the understanding of how upper atmospheric NO behaves, and could be used to increase the accuracy of future space weather and climate models. Thirteen years of NO flux data, observed at 100-250 km altitude by the SABER instrument onboard the TIMED satellite, is decomposed into five empirical orthogonal functions (EOFs) and their amplitudes to: 1) determine the strongest modes of variability in the data set, and 2) develop a compact model of NO flux. The first five EOFs account for 85% of the variability in the data, and their uncertainty is verified using cross-validation analysis. Although these linearly independent EOFs are not necessarily independent in a geophysical sense, the first three EOFs correlate strongly with different geophysical processes. The first EOF correlates strongly with Kp and F10.7, suggesting that geomagnetic storms and solar weather account for a large portion of NO flux variability. EOF 2 shows annual variations, and EOF 3 correlates with solar wind parameters. Using these relations, an empirical model of the EOF amplitudes can be derived, which could be used as a predictive tool for future NO emissions. We illustrate the NO model, highlight some of the hemispheric asymmetries, and discuss the geophysical associations of the EOFs.

An Intuitive Approach to Steady-State Kinetics.

ERIC Educational Resources Information Center

Raines, Ronald T.; Hansen, David E.

1988-01-01

Attempts to provide an intuitive understanding of steady state kinetics. Discusses the meaning of steady state and uses free energy profiles to illustrate and follow complex kinetic and thermodynamic relationships. Provides examples with explanations. (MVL)

Kinetic scale structure of low-frequency waves and fluctuations

NASA Astrophysics Data System (ADS)

Lopez Herrera, R. A.; Figueroa-Vinas, A.; Araneda, J. A.; Yoon, P. H.

2017-12-01

The dissipation of solar wind turbulence at kinetic scales is believed to be important for heating the corona and accelerating the wind. Linear Vlasov kinetic theory is a useful tool in identifying various wave modes, including kinetic Alfvén, fast magnetosonic/whistler, ion-acoustic (or kinetic slow mode), and their possible roles in the dissipation. However, kinetic mode structure near the vicinity of ion cyclotron modes is not clearly understood. The present poster aims to further elucidate the structure of these low-frequency waves by introducing discrete particle effects through hybrid simulations and Klimontovich formalism of spontaneous emission theory. The theory and simulation of spontaneously emitted low-frequency fluctuations are employed to identify and distinguish the detailed mode structures associated with ion Bernstein versus quasi modes. The spontaneous emission theory and simulation also confirm the findings of Vlasov theory in that the kinetic Alfvén wave can be defined over a wide range of frequencies, including the proton cyclotron frequency and its harmonics, especially for high beta plasmas. This implies that these low-frequency modes may play predominant roles even in the fully kinetic description of kinetic scale turbulence and dissipation despite the fact that cyclotron harmonic and Bernstein modes may also play important roles in wave-particle interactions.

Advances in Stereoconvergent Catalysis from 2005–2015: Transition-Metal-Mediated Stereoablative Reactions, Dynamic Kinetic Resolutions, and Dynamic Kinetic Asymmetric Transformations

PubMed Central

Bhat, Vikram; Welin, Eric R.; Guo, Xuelei; Stoltz, Brian M.

2017-01-01

An important subset of asymmetric synthesis is dynamic kinetic resolution, dynamic kinetic asymmetric processes and stereoablative transformations. Initially, only enzymes were known to catalyze dynamic kinetic processes but recently various synthetic catalysts have been developed. This review summarizes major advances in non-enzymatic, transition metal promoted dynamic asymmetric transformations reported between 2005 and 2015. PMID:28164696

Advances in electron kinetics and theory of gas discharges

DOE Office of Scientific and Technical Information (OSTI.GOV)

Kolobov, Vladimir I.; The University of Alabama in Huntsville, Huntsville, Alabama 35899

2013-10-15

“Electrons, like people, are fertile and infertile: high-energy electrons are fertile and able to reproduce.”—Lev TsendinModern physics of gas discharges increasingly uses physical kinetics for analysis of non-equilibrium plasmas. The description of underlying physics at the kinetic level appears to be important for plasma applications in modern technologies. In this paper, we attempt to grasp the legacy of Professor Lev Tsendin, who advocated the use of the kinetic approach for understanding fundamental problems of gas discharges. We outline the fundamentals of electron kinetics in low-temperature plasmas, describe elements of the modern kinetic theory of gas discharges, and show examples ofmore » the theoretical approach to gas discharge problems used by Lev Tsendin. Important connections between electron kinetics in gas discharges and semiconductors are also discussed. Using several examples, we illustrate how Tsendin's ideas and methods are currently being developed for the implementation of next generation computational tools for adaptive kinetic-fluid simulations of gas discharges used in modern technologies.« less

A Century of Enzyme Kinetic Analysis, 1913 to 2013

PubMed Central

Johnson, Kenneth A.

2013-01-01

This review traces the history and logical progression of methods for quantitative analysis of enzyme kinetics from the 1913 Michaelis and Menten paper to the application of modern computational methods today. Following a brief review of methods for fitting steady state kinetic data, modern methods are highlighted for fitting full progress curve kinetics based upon numerical integration of rate equations, including a re-analysis of the original Michaelis-Menten full time course kinetic data. Finally, several illustrations of modern transient state kinetic methods of analysis are shown which enable the elucidation of reactions occurring at the active sites of enzymes in order to relate structure and function. PMID:23850893

Oxidation kinetics of molten copper sulfide

NASA Astrophysics Data System (ADS)

Alyaser, A. H.; Brimacombe, J. K.

1995-02-01

The oxidation kinetics of molten Cu2S baths, during top lancing with oxygen/nitrogen (argon) mixtures, have been investigated as a function of oxygen partial pressure (0.2 to 0.78), bath temperature (1200 °C to 1300 °C), gas flow rate (1 to 4 L/min), and bath mixing. Surface-tension-driven flows (the Marangoni effect) were observed both visually and photographically. Thus, the oxidation of molten Cu2S was found to progress in two distinct stages, the kinetics of which are limited by the mass transfer of oxygen in the gas phase to the melt surface. During the primary stage, the melt is partially desulfurized while oxygen dissolves in the liquid sulfide. Upon saturation of the melt with oxygen, the secondary stage commences in which surface and bath reactions proceed to generate copper and SO2 electrochemically. A mathematical model of the reaction kinetics has been formulated and tested against the measurements. The results of this study shed light on the process kinetics of the copper blow in a Peirce-Smith converter or Mitsubishi reactor.

Liquefaction chemistry and kinetics: Hydrogen utilization studies

DOE Office of Scientific and Technical Information (OSTI.GOV)

Rothenberger, K.S.; Warzinski, R.P.; Cugini, A.V.

1995-12-31

The objectives of this project are to investigate the chemistry and kinetics that occur in the initial stages of coal liquefaction and to determine the effects of hydrogen pressure, catalyst activity, and solvent type on the quantity and quality of the products produced. The project comprises three tasks: (1) preconversion chemistry and kinetics, (2) hydrogen utilization studies, and (3) assessment of kinetic models for liquefaction. The hydrogen utilization studies work will be the main topic of this report. However, the other tasks are briefly described.

Tolrestat kinetics

DOE Office of Scientific and Technical Information (OSTI.GOV)

Hicks, D.R.; Kraml, M.; Cayen, M.N.

The kinetics of tolrestat, a potent inhibitor of aldose reductase, were examined. Serum concentrations of tolrestat and of total /sup 14/C were measured after dosing normal subjects and subjects with diabetes with /sup 14/C-labeled tolrestat. In normal subjects, tolrestat was rapidly absorbed and disappearance from serum was biphasic. Distribution and elimination t 1/2s were approximately 2 and 10 to 12 hr, respectively, after single and multiple doses. Unchanged tolrestat accounted for the major portion of /sup 14/C in serum. Radioactivity was rapidly and completely excreted in urine and feces in an approximate ratio of 2:1. Findings were much the samemore » in subjects with diabetes. In normal subjects, the kinetics of oral tolrestat were independent of dose in the 10 to 800 mg range. Repetitive dosing did not result in unexpected cumulation. Tolrestat was more than 99% bound to serum protein; it did not compete with warfarin for binding sites but was displaced to some extent by high concentrations of tolbutamide or salicylate.« less

Kinetic Theories for Biofilms (Preprint)

DTIC Science & Technology

2011-01-01

2011 2. REPORT TYPE 3. DATES COVERED 00-00-2011 to 00-00-2011 4. TITLE AND SUBTITLE Kinetic Theories for Biofilms 5a. CONTRACT NUMBER 5b...binary complex fluids to develop a set of hydrodynamic models for the two-phase mixture of biofilms and solvent (water). It is aimed to model...kinetics along with the intrinsic molecular elasticity of the EPS network strand modeled as an elastic dumbbell. This theory is valid in both the biofilm

The Kinetics of Dissolution Revisited

NASA Astrophysics Data System (ADS)

Antonel, Paula S.; Hoijemberg, Pablo A.; Maiante, Leandro M.; Lagorio, M. Gabriela

2003-09-01

An experiment analyzing the kinetics of dissolution of a solid with cylindrical geometry in water is presented. The dissolution process is followed by measuring the solid mass and its size parameters (thickness and diameter) as a function of time. It is verified that the dissolution rate follows the Nernst model. Data treatment is compared with the dissolution of a spherical solid previously described. Kinetics, diffusion concepts, and polynomial fitting of experimental data are combined in this simple experiment.

Kinetics of pack aluminization of nickel

NASA Technical Reports Server (NTRS)

Seigle, L. L.; Gupta, B. K.; Shankar, R.; Sarkhel, A. K.

1978-01-01

The kinetics of pack aluminization of unalloyed nickel in packs of varying aluminum activity with various halide activators were studied. Surface compositions of the coatings as functions of time, temperature, and pack composition were obtained in order to establish the boundary conditions for diffusion in the system. The structure of the packs was also examined in order to clarify the mechanism of aluminum transport. The results indicate that the kinetics of pack aluminization are controlled jointly by gas diffusion in the pack and solid diffusion in the coating. Levine and Caves' model for gas diffusion was combined with calculations of rates of diffusion in the solid to formulate a more complete theory for the kinetics of pack aluminization.

On-rate based optimization of structure-kinetic relationship--surfing the kinetic map.

PubMed

Schoop, Andreas; Dey, Fabian

2015-10-01

In the lead discovery process residence time has become an important parameter for the identification and characterization of the most efficacious compounds in vivo. To enable the success of compound optimization by medicinal chemistry toward a desired residence time the understanding of structure-kinetic relationship (SKR) is essential. This article reviews various approaches to monitor SKR and suggests using the on-rate as the key monitoring parameter. The literature is reviewed and examples of compound series with low variability as well as with significant changes in on-rates are highlighted. Furthermore, findings of kinetic on-rate changes are presented and potential underlying rationales are discussed. Copyright © 2015 Elsevier Ltd. All rights reserved.

Viral kinetic modeling: state of the art

DOE PAGES

Canini, Laetitia; Perelson, Alan S.

2014-06-25

Viral kinetic modeling has led to increased understanding of the within host dynamics of viral infections and the effects of therapy. Here we review recent developments in the modeling of viral infection kinetics with emphasis on two infectious diseases: hepatitis C and influenza. We review how viral kinetic modeling has evolved from simple models of viral infections treated with a drug or drug cocktail with an assumed constant effectiveness to models that incorporate drug pharmacokinetics and pharmacodynamics, as well as phenomenological models that simply assume drugs have time varying-effectiveness. We also discuss multiscale models that include intracellular events in viralmore » replication, models of drug-resistance, models that include innate and adaptive immune responses and models that incorporate cell-to-cell spread of infection. Overall, viral kinetic modeling has provided new insights into the understanding of the disease progression and the modes of action of several drugs. In conclusion, we expect that viral kinetic modeling will be increasingly used in the coming years to optimize drug regimens in order to improve therapeutic outcomes and treatment tolerability for infectious diseases.« less

Kinetic energy budgets in areas of convection

NASA Technical Reports Server (NTRS)

Fuelberg, H. E.

1979-01-01

Synoptic scale budgets of kinetic energy are computed using 3 and 6 h data from three of NASA's Atmospheric Variability Experiments (AVE's). Numerous areas of intense convection occurred during the three experiments. Large kinetic energy variability, with periods as short as 6 h, is observed in budgets computed over each entire experiment area and over limited volumes that barely enclose the convection and move with it. Kinetic energy generation and transport processes in the smaller volumes are often a maximum when the enclosed storms are near peak intensity, but the nature of the various energy processes differs between storm cases and seems closely related to the synoptic conditions. A commonly observed energy budget for peak storm intensity indicates that generation of kinetic energy by cross-contour flow is the major energy source while dissipation to subgrid scales is the major sink. Synoptic scale vertical motion transports kinetic energy from lower to upper levels of the atmosphere while low-level horizontal flux convergence and upper-level horizontal divergence also occur. Spatial fields of the energy budget terms show that the storm environment is a major center of energy activity for the entire area.

qPIPSA: Relating enzymatic kinetic parameters and interaction fields

PubMed Central

Gabdoulline, Razif R; Stein, Matthias; Wade, Rebecca C

2007-01-01

Background The simulation of metabolic networks in quantitative systems biology requires the assignment of enzymatic kinetic parameters. Experimentally determined values are often not available and therefore computational methods to estimate these parameters are needed. It is possible to use the three-dimensional structure of an enzyme to perform simulations of a reaction and derive kinetic parameters. However, this is computationally demanding and requires detailed knowledge of the enzyme mechanism. We have therefore sought to develop a general, simple and computationally efficient procedure to relate protein structural information to enzymatic kinetic parameters that allows consistency between the kinetic and structural information to be checked and estimation of kinetic constants for structurally and mechanistically similar enzymes. Results We describe qPIPSA: quantitative Protein Interaction Property Similarity Analysis. In this analysis, molecular interaction fields, for example, electrostatic potentials, are computed from the enzyme structures. Differences in molecular interaction fields between enzymes are then related to the ratios of their kinetic parameters. This procedure can be used to estimate unknown kinetic parameters when enzyme structural information is available and kinetic parameters have been measured for related enzymes or were obtained under different conditions. The detailed interaction of the enzyme with substrate or cofactors is not modeled and is assumed to be similar for all the proteins compared. The protein structure modeling protocol employed ensures that differences between models reflect genuine differences between the protein sequences, rather than random fluctuations in protein structure. Conclusion Provided that the experimental conditions and the protein structural models refer to the same protein state or conformation, correlations between interaction fields and kinetic parameters can be established for sets of related enzymes

The logic of kinetic regulation in the thioredoxin system

PubMed Central

2011-01-01

Background The thioredoxin system consisting of NADP(H), thioredoxin reductase and thioredoxin provides reducing equivalents to a large and diverse array of cellular processes. Despite a great deal of information on the kinetics of individual thioredoxin-dependent reactions, the kinetic regulation of this system as an integrated whole is not known. We address this by using kinetic modeling to identify and describe kinetic behavioral motifs found within the system. Results Analysis of a realistic computational model of the Escherichia coli thioredoxin system revealed several modes of kinetic regulation in the system. In keeping with published findings, the model showed that thioredoxin-dependent reactions were adaptable (i.e. changes to the thioredoxin system affected the kinetic profiles of these reactions). Further and in contrast to other systems-level descriptions, analysis of the model showed that apparently unrelated thioredoxin oxidation reactions can affect each other via their combined effects on the thioredoxin redox cycle. However, the scale of these effects depended on the kinetics of the individual thioredoxin oxidation reactions with some reactions more sensitive to changes in the thioredoxin cycle and others, such as the Tpx-dependent reduction of hydrogen peroxide, less sensitive to these changes. The coupling of the thioredoxin and Tpx redox cycles also allowed for ultrasensitive changes in the thioredoxin concentration in response to changes in the thioredoxin reductase concentration. We were able to describe the kinetic mechanisms underlying these behaviors precisely with analytical solutions and core models. Conclusions Using kinetic modeling we have revealed the logic that underlies the functional organization and kinetic behavior of the thioredoxin system. The thioredoxin redox cycle and associated reactions allows for a system that is adaptable, interconnected and able to display differential sensitivities to changes in this redox cycle. This

Did saber-tooth kittens grow up musclebound? A study of postnatal limb bone allometry in felids from the Pleistocene of Rancho La Brea.

PubMed

Long, Katherine; Prothero, Donald; Madan, Meena; Syverson, Valerie J P

2017-01-01

Previous studies have demonstrated that the Pleistocene saber-toothed cat Smilodon fatalis had many forelimb adaptations for increased strength, presumably to grapple with and subdue prey. The Rancho La Brea tar pits yield large samples of juvenile limb bones forming a growth series that allow us to examine how Smilodon kittens grew up. Almost all available juvenile limb bones were measured, and reduced major axis fits were calculated to determine the allometric growth trends. Contrary to expectations based on their robust limbs, Smilodon kittens show the typical pattern of growth found in other large felids (such as the Ice Age lion, Panthera atrox, as well as living tigers, cougars, servals, and wildcats) where the limb grows longer and more slender faster than they grow thick. This adaptation is thought to give felids greater running speed. Smilodon kittens do not grow increasingly more robust with age. Instead, they start out robust and follow the ancestral felid growth pattern, while maintaining their robustness compared to other felids. Apparently, the growth of felid forelimbs is highly canalized and their ontogeny is tightly constrained.

Polarization and Compressibility of Oblique Kinetic Alfven Waves

NASA Technical Reports Server (NTRS)

Hunana, Peter; Goldstein, M. L.; Passot, T.; Sulem, P. L.; Laveder, D.; Zank, G. P.

2012-01-01

Even though solar wind, as a collisionless plasma, is properly described by the kineticMaxwell-Vlasov description, it can be argued that much of our understanding of solar wind observational data comes from an interpretation and numerical modeling which is based on a fluid description of magnetohydrodynamics. In recent years, there has been a significant interest in better understanding the importance of kinetic effects, i.e. the differences between the kinetic and usual fluid descriptions. Here we concentrate on physical properties of oblique kinetic Alfvn waves (KAWs), which are often recognized as one of the key ingredients in the solar wind turbulence cascade. We use three different fluid models with various degrees of complexity and calculate polarization and magnetic compressibility of oblique KAWs (propagation angle q = 88), which we compare to solutions derived from linear kinetic theory. We explore a wide range of possible proton plasma b = [0.1,10.0] and a wide range of length scales krL = [0.001,10.0]. It is shown that the classical isotropic two-fluid model is very compressible in comparison with kinetic theory and that the largest discrepancy occurs at scales larger than the proton gyroscale. We also show that the two-fluid model contains a large error in the polarization of electric field, even at scales krL 1. Furthermore, to understand these discrepancies between the two-fluid model and the kinetic theory, we employ two versions of the Landau fluid model that incorporate linear low-frequency kinetic effects such as Landau damping and finite Larmor radius (FLR) corrections into the fluid description. It is shown that Landau damping significantly reduces the magnetic compressibility and that FLR corrections (i.e. nongyrotropic contributions) are required to correctly capture the polarization.We also show that, in addition to Landau damping, FLR corrections are necessary to accurately describe the damping rate of KAWs. We conclude that kinetic effects

Kinetic Scale Structure of Low-frequency Waves and Fluctuations

DOE Office of Scientific and Technical Information (OSTI.GOV)

López, Rodrigo A.; Yoon, Peter H.; Viñas, Adolfo F.

The dissipation of solar wind turbulence at kinetic scales is believed to be important for the heating of the corona and for accelerating the wind. The linear Vlasov kinetic theory is a useful tool for identifying various wave modes, including kinetic Alfvén, fast magnetosonic/whistler, and ion-acoustic (or kinetic slow), and their possible roles in the dissipation. However, the kinetic mode structure in the vicinity of ion-cyclotron modes is not clearly understood. The present paper aims to further elucidate the structure of these low-frequency waves by introducing discrete particle effects through hybrid simulations and Klimontovich formalism of spontaneous emission theory. Themore » theory and simulation of spontaneously emitted low-frequency fluctuations are employed to identify and distinguish the detailed mode structures associated with ion-Bernstein modes versus quasi-modes. The spontaneous emission theory and simulation also confirm the findings of the Vlasov theory in that the kinetic Alfvén waves can be defined over a wide range of frequencies, including the proton cyclotron frequency and its harmonics, especially for high-beta plasmas. This implies that these low-frequency modes may play predominant roles even in the fully kinetic description of kinetic scale turbulence and dissipation despite the fact that cyclotron harmonic and Bernstein modes may also play important roles in wave–particle interactions.« less

Two-dimensional implosion simulations with a kinetic particle code [2D implosion simulations with a kinetic particle code

DOE Office of Scientific and Technical Information (OSTI.GOV)

Sagert, Irina; Even, Wesley Paul; Strother, Terrance Timothy

Here, we perform two-dimensional implosion simulations using a Monte Carlo kinetic particle code. The application of a kinetic transport code is motivated, in part, by the occurrence of nonequilibrium effects in inertial confinement fusion capsule implosions, which cannot be fully captured by hydrodynamic simulations. Kinetic methods, on the other hand, are able to describe both continuum and rarefied flows. We perform simple two-dimensional disk implosion simulations using one-particle species and compare the results to simulations with the hydrodynamics code rage. The impact of the particle mean free path on the implosion is also explored. In a second study, we focusmore » on the formation of fluid instabilities from induced perturbations. We find good agreement with hydrodynamic studies regarding the location of the shock and the implosion dynamics. Differences are found in the evolution of fluid instabilities, originating from the higher resolution of rage and statistical noise in the kinetic studies.« less

Two-dimensional implosion simulations with a kinetic particle code [2D implosion simulations with a kinetic particle code

DOE PAGES

Sagert, Irina; Even, Wesley Paul; Strother, Terrance Timothy

2017-05-17

Here, we perform two-dimensional implosion simulations using a Monte Carlo kinetic particle code. The application of a kinetic transport code is motivated, in part, by the occurrence of nonequilibrium effects in inertial confinement fusion capsule implosions, which cannot be fully captured by hydrodynamic simulations. Kinetic methods, on the other hand, are able to describe both continuum and rarefied flows. We perform simple two-dimensional disk implosion simulations using one-particle species and compare the results to simulations with the hydrodynamics code rage. The impact of the particle mean free path on the implosion is also explored. In a second study, we focusmore » on the formation of fluid instabilities from induced perturbations. We find good agreement with hydrodynamic studies regarding the location of the shock and the implosion dynamics. Differences are found in the evolution of fluid instabilities, originating from the higher resolution of rage and statistical noise in the kinetic studies.« less

Mechanisms of kinetic stabilization by the drugs paclitaxel and vinblastine

PubMed Central

Castle, Brian T.; McCubbin, Seth; Prahl, Louis S.; Bernens, Jordan N.; Sept, David; Odde, David J.

2017-01-01

Microtubule-targeting agents (MTAs), widely used as biological probes and chemotherapeutic drugs, bind directly to tubulin subunits and “kinetically stabilize” microtubules, suppressing the characteristic self-assembly process of dynamic instability. However, the molecular-level mechanisms of kinetic stabilization are unclear, and the fundamental thermodynamic and kinetic requirements for dynamic instability and its elimination by MTAs have yet to be defined. Here we integrate a computational model for microtubule assembly with nanometer-scale fluorescence microscopy measurements to identify the kinetic and thermodynamic basis of kinetic stabilization by the MTAs paclitaxel, an assembly promoter, and vinblastine, a disassembly promoter. We identify two distinct modes of kinetic stabilization in live cells, one that truly suppresses on-off kinetics, characteristic of vinblastine, and the other a “pseudo” kinetic stabilization, characteristic of paclitaxel, that nearly eliminates the energy difference between the GTP- and GDP-tubulin thermodynamic states. By either mechanism, the main effect of both MTAs is to effectively stabilize the microtubule against disassembly in the absence of a robust GTP cap. PMID:28298489

A note on the maintenance of the atmospheric kinetic energy

NASA Technical Reports Server (NTRS)

Chen, T.-C.; Lee, Y.-H.

1982-01-01

The winter simulations of the GLAS climate model and the NCAR community climate model are used to examine the maintenance of the atmospheric kinetic energy. It is found that the kinetic energy is generated in the lower latitudes south of the maximum westerlies, transported northward and then, destroyed in the midlatitudes north of the maximum westerlies. Therefore, the atmospheric kinetic energy is maintained by the counterbalance between the divergence (convergence) of kinetic energy flux and generation (destruction) of kinetic energy in lower (middle) latitudes.

A study of the kinetic energy generation with general circulation models

NASA Technical Reports Server (NTRS)

Chen, T.-C.; Lee, Y.-H.

1983-01-01

The history data of winter simulation by the GLAS climate model and the NCAR community climate model are used to examine the generation of atmospheric kinetic energy. The contrast between the geographic distributions of the generation of kinetic energy and divergence of kinetic energy flux shows that kinetic energy is generated in the upstream side of jets, transported to the downstream side and destroyed there. The contributions from the time-mean and transient modes to the counterbalance between generation of kinetic energy and divergence of kinetic energy flux are also investigated. It is observed that the kinetic energy generated by the time-mean mode is essentially redistributed by the time-mean flow, while that generated by the transient flow is mainly responsible for the maintenance of the kinetic energy of the entire atmospheric flow.

Inflation Rates, Car Devaluation, and Chemical Kinetics.

ERIC Educational Resources Information Center

Pogliani, Lionello; Berberan-Santos, Mario N.

1996-01-01

Describes the inflation rate problem and offers an interesting analogy with chemical kinetics. Presents and solves the car devaluation problem as a normal chemical kinetic problem where the order of the rate law and the value of the rate constant are derived. (JRH)

Kinetics from Replica Exchange Molecular Dynamics Simulations.

PubMed

Stelzl, Lukas S; Hummer, Gerhard

2017-08-08

Transitions between metastable states govern many fundamental processes in physics, chemistry and biology, from nucleation events in phase transitions to the folding of proteins. The free energy surfaces underlying these processes can be obtained from simulations using enhanced sampling methods. However, their altered dynamics makes kinetic and mechanistic information difficult or impossible to extract. Here, we show that, with replica exchange molecular dynamics (REMD), one can not only sample equilibrium properties but also extract kinetic information. For systems that strictly obey first-order kinetics, the procedure to extract rates is rigorous. For actual molecular systems whose long-time dynamics are captured by kinetic rate models, accurate rate coefficients can be determined from the statistics of the transitions between the metastable states at each replica temperature. We demonstrate the practical applicability of the procedure by constructing master equation (Markov state) models of peptide and RNA folding from REMD simulations.

Following atomistic kinetics on experimental timescales with the kinetic Activation–Relaxation Technique

DOE PAGES

Mousseau, Normand; Béland, Laurent Karim; Brommer, Peter; ...

2014-12-24

The properties of materials, even at the atomic level, evolve on macroscopic time scales. Following this evolution through simulation has been a challenge for many years. For lattice-based activated diffusion, kinetic Monte Carlo has turned out to be an almost perfect solution. Various accelerated molecular dynamical schemes, for their part, have allowed the study on long time scale of relatively simple systems. There is still a desire and need, however, for methods able to handle complex materials such as alloys and disordered systems. In this paper, we review the kinetic Activation–Relaxation Technique (k-ART), one of a handful of off-lattice kineticmore » Monte Carlo methods, with on-the-fly cataloging, that have been proposed in the last few years.« less

A century of enzyme kinetic analysis, 1913 to 2013.

PubMed

Johnson, Kenneth A

2013-09-02

This review traces the history and logical progression of methods for quantitative analysis of enzyme kinetics from the 1913 Michaelis and Menten paper to the application of modern computational methods today. Following a brief review of methods for fitting steady state kinetic data, modern methods are highlighted for fitting full progress curve kinetics based upon numerical integration of rate equations, including a re-analysis of the original Michaelis-Menten full time course kinetic data. Finally, several illustrations of modern transient state kinetic methods of analysis are shown which enable the elucidation of reactions occurring at the active sites of enzymes in order to relate structure and function. Copyright © 2013 Federation of European Biochemical Societies. Published by Elsevier B.V. All rights reserved.

Kinetic constrained optimization of the golf swing hub path.

PubMed

Nesbit, Steven M; McGinnis, Ryan S

2014-12-01

This study details an optimization of the golf swing, where the hand path and club angular trajectories are manipulated. The optimization goal was to maximize club head velocity at impact within the interaction kinetic limitations (force, torque, work, and power) of the golfer as determined through the analysis of a typical swing using a two-dimensional dynamic model. The study was applied to four subjects with diverse swing capabilities and styles. It was determined that it is possible for all subjects to increase their club head velocity at impact within their respective kinetic limitations through combined modifications to their respective hand path and club angular trajectories. The manner of the modifications, the degree of velocity improvement, the amount of kinetic reduction, and the associated kinetic limitation quantities were subject dependent. By artificially minimizing selected kinetic inputs within the optimization algorithm, it was possible to identify swing trajectory characteristics that indicated relative kinetic weaknesses of a subject. Practical implications are offered based upon the findings of the study. Key PointsThe hand path trajectory is an important characteristic of the golf swing and greatly affects club head velocity and golfer/club energy transfer.It is possible to increase the energy transfer from the golfer to the club by modifying the hand path and swing trajectories without increasing the kinetic output demands on the golfer.It is possible to identify relative kinetic output strengths and weakness of a golfer through assessment of the hand path and swing trajectories.Increasing any one of the kinetic outputs of the golfer can potentially increase the club head velocity at impact.The hand path trajectory has important influences over the club swing trajectory.

Kinetic Constrained Optimization of the Golf Swing Hub Path

PubMed Central

Nesbit, Steven M.; McGinnis, Ryan S.

2014-01-01

This study details an optimization of the golf swing, where the hand path and club angular trajectories are manipulated. The optimization goal was to maximize club head velocity at impact within the interaction kinetic limitations (force, torque, work, and power) of the golfer as determined through the analysis of a typical swing using a two-dimensional dynamic model. The study was applied to four subjects with diverse swing capabilities and styles. It was determined that it is possible for all subjects to increase their club head velocity at impact within their respective kinetic limitations through combined modifications to their respective hand path and club angular trajectories. The manner of the modifications, the degree of velocity improvement, the amount of kinetic reduction, and the associated kinetic limitation quantities were subject dependent. By artificially minimizing selected kinetic inputs within the optimization algorithm, it was possible to identify swing trajectory characteristics that indicated relative kinetic weaknesses of a subject. Practical implications are offered based upon the findings of the study. Key Points The hand path trajectory is an important characteristic of the golf swing and greatly affects club head velocity and golfer/club energy transfer. It is possible to increase the energy transfer from the golfer to the club by modifying the hand path and swing trajectories without increasing the kinetic output demands on the golfer. It is possible to identify relative kinetic output strengths and weakness of a golfer through assessment of the hand path and swing trajectories. Increasing any one of the kinetic outputs of the golfer can potentially increase the club head velocity at impact. The hand path trajectory has important influences over the club swing trajectory. PMID:25435779

Computer-Aided Construction of Chemical Kinetic Models

DOE Office of Scientific and Technical Information (OSTI.GOV)

Green, William H.

2014-12-31

The combustion chemistry of even simple fuels can be extremely complex, involving hundreds or thousands of kinetically significant species. The most reasonable way to deal with this complexity is to use a computer not only to numerically solve the kinetic model, but also to construct the kinetic model in the first place. Because these large models contain so many numerical parameters (e.g. rate coefficients, thermochemistry) one never has sufficient data to uniquely determine them all experimentally. Instead one must work in “predictive” mode, using theoretical rather than experimental values for many of the numbers in the model, and as appropriatemore » refining the most sensitive numbers through experiments. Predictive chemical kinetics is exactly what is needed for computer-aided design of combustion systems based on proposed alternative fuels, particularly for early assessment of the value and viability of proposed new fuels before those fuels are commercially available. This project was aimed at making accurate predictive chemical kinetics practical; this is a challenging goal which requires a range of science advances. The project spanned a wide range from quantum chemical calculations on individual molecules and elementary-step reactions, through the development of improved rate/thermo calculation procedures, the creation of algorithms and software for constructing and solving kinetic simulations, the invention of methods for model-reduction while maintaining error control, and finally comparisons with experiment. Many of the parameters in the models were derived from quantum chemistry calculations, and the models were compared with experimental data measured in our lab or in collaboration with others.« less

Optimal bioprocess design through a gene regulatory network - growth kinetic hybrid model: Towards Replacing Monod kinetics.

PubMed

Tsipa, Argyro; Koutinas, Michalis; Usaku, Chonlatep; Mantalaris, Athanasios

2018-05-02

Currently, design and optimisation of biotechnological bioprocesses is performed either through exhaustive experimentation and/or with the use of empirical, unstructured growth kinetics models. Whereas, elaborate systems biology approaches have been recently explored, mixed-substrate utilisation is predominantly ignored despite its significance in enhancing bioprocess performance. Herein, bioprocess optimisation for an industrially-relevant bioremediation process involving a mixture of highly toxic substrates, m-xylene and toluene, was achieved through application of a novel experimental-modelling gene regulatory network - growth kinetic (GRN-GK) hybrid framework. The GRN model described the TOL and ortho-cleavage pathways in Pseudomonas putida mt-2 and captured the transcriptional kinetics expression patterns of the promoters. The GRN model informed the formulation of the growth kinetics model replacing the empirical and unstructured Monod kinetics. The GRN-GK framework's predictive capability and potential as a systematic optimal bioprocess design tool, was demonstrated by effectively predicting bioprocess performance, which was in agreement with experimental values, when compared to four commonly used models that deviated significantly from the experimental values. Significantly, a fed-batch biodegradation process was designed and optimised through the model-based control of TOL Pr promoter expression resulting in 61% and 60% enhanced pollutant removal and biomass formation, respectively, compared to the batch process. This provides strong evidence of model-based bioprocess optimisation at the gene level, rendering the GRN-GK framework as a novel and applicable approach to optimal bioprocess design. Finally, model analysis using global sensitivity analysis (GSA) suggests an alternative, systematic approach for model-driven strain modification for synthetic biology and metabolic engineering applications. Copyright © 2018. Published by Elsevier Inc.

Parameter Balancing in Kinetic Models of Cell Metabolism†

PubMed Central

2010-01-01

Kinetic modeling of metabolic pathways has become a major field of systems biology. It combines structural information about metabolic pathways with quantitative enzymatic rate laws. Some of the kinetic constants needed for a model could be collected from ever-growing literature and public web resources, but they are often incomplete, incompatible, or simply not available. We address this lack of information by parameter balancing, a method to complete given sets of kinetic constants. Based on Bayesian parameter estimation, it exploits the thermodynamic dependencies among different biochemical quantities to guess realistic model parameters from available kinetic data. Our algorithm accounts for varying measurement conditions in the input data (pH value and temperature). It can process kinetic constants and state-dependent quantities such as metabolite concentrations or chemical potentials, and uses prior distributions and data augmentation to keep the estimated quantities within plausible ranges. An online service and free software for parameter balancing with models provided in SBML format (Systems Biology Markup Language) is accessible at www.semanticsbml.org. We demonstrate its practical use with a small model of the phosphofructokinase reaction and discuss its possible applications and limitations. In the future, parameter balancing could become an important routine step in the kinetic modeling of large metabolic networks. PMID:21038890

Modelling dimercaptosuccinic acid (DMSA) plasma kinetics in humans.

PubMed

van Eijkeren, Jan C H; Olie, J Daniël N; Bradberry, Sally M; Vale, J Allister; de Vries, Irma; Meulenbelt, Jan; Hunault, Claudine C

2016-11-01

No kinetic models presently exist which simulate the effect of chelation therapy on lead blood concentrations in lead poisoning. Our aim was to develop a kinetic model that describes the kinetics of dimercaptosuccinic acid (DMSA; succimer), a commonly used chelating agent, that could be used in developing a lead chelating model. This was a kinetic modelling study. We used a two-compartment model, with a non-systemic gastrointestinal compartment (gut lumen) and the whole body as one systemic compartment. The only data available from the literature were used to calibrate the unknown model parameters. The calibrated model was then validated by comparing its predictions with measured data from three different experimental human studies. The model predicted total DMSA plasma and urine concentrations measured in three healthy volunteers after ingestion of DMSA 10 mg/kg. The model was then validated by using data from three other published studies; it predicted concentrations within a factor of two, representing inter-human variability. A simple kinetic model simulating the kinetics of DMSA in humans has been developed and validated. The interest of this model lies in the future potential to use it to predict blood lead concentrations in lead-poisoned patients treated with DMSA.

Stochastic lumping analysis for linear kinetics and its application to the fluctuation relations between hierarchical kinetic networks.

PubMed

Deng, De-Ming; Chang, Cheng-Hung

2015-05-14

Conventional studies of biomolecular behaviors rely largely on the construction of kinetic schemes. Since the selection of these networks is not unique, a concern is raised whether and under which conditions hierarchical schemes can reveal the same experimentally measured fluctuating behaviors and unique fluctuation related physical properties. To clarify these questions, we introduce stochasticity into the traditional lumping analysis, generalize it from rate equations to chemical master equations and stochastic differential equations, and extract the fluctuation relations between kinetically and thermodynamically equivalent networks under intrinsic and extrinsic noises. The results provide a theoretical basis for the legitimate use of low-dimensional models in the studies of macromolecular fluctuations and, more generally, for exploring stochastic features in different levels of contracted networks in chemical and biological kinetic systems.

Thermodynamically Feasible Kinetic Models of Reaction Networks

PubMed Central

Ederer, Michael; Gilles, Ernst Dieter

2007-01-01

The dynamics of biological reaction networks are strongly constrained by thermodynamics. An holistic understanding of their behavior and regulation requires mathematical models that observe these constraints. However, kinetic models may easily violate the constraints imposed by the principle of detailed balance, if no special care is taken. Detailed balance demands that in thermodynamic equilibrium all fluxes vanish. We introduce a thermodynamic-kinetic modeling (TKM) formalism that adapts the concepts of potentials and forces from irreversible thermodynamics to kinetic modeling. In the proposed formalism, the thermokinetic potential of a compound is proportional to its concentration. The proportionality factor is a compound-specific parameter called capacity. The thermokinetic force of a reaction is a function of the potentials. Every reaction has a resistance that is the ratio of thermokinetic force and reaction rate. For mass-action type kinetics, the resistances are constant. Since it relies on the thermodynamic concept of potentials and forces, the TKM formalism structurally observes detailed balance for all values of capacities and resistances. Thus, it provides an easy way to formulate physically feasible, kinetic models of biological reaction networks. The TKM formalism is useful for modeling large biological networks that are subject to many detailed balance relations. PMID:17208985

On the Linearly-Balanced Kinetic Energy Spectrum

NASA Technical Reports Server (NTRS)

Lu, Huei,-Iin; Robertson, F. R.

1999-01-01

It is well known that the earth's atmospheric motion can generally be characterized by the two dimensional quasi-geostrophic approximation, in which the constraints on global integrals of kinetic energy, entrophy and potential vorticity play very important roles in redistributing the wave energy among different scales of motion. Assuming the hypothesis of Kolmogrov's local isotropy, derived a -3 power law of the equilibrium two-dimensional kinetic energy spectrum that entails constant vorticity and zero energy flows from the energy-containing wave number up to the viscous cutoff. In his three dimensional quasi-geostrophic theory, showed that the spectrum function of the vertical scale turbulence - expressible in terms of the available potential energy - possesses the same power law as the two dimensional kinetic energy spectrum. As the slope of kinetic energy spectrum in the inertial range is theoretically related to the predictability of the synoptic scales (Lorenz, 1969), many general circulation models includes a horizontal diffusion to provide reasonable kinetic energy spectra, although the actual power law exhibited in the atmospheric general circulation is controversial. Note that in either the atmospheric modeling or the observational analyses, the proper choice of wave number Index to represent the turbulence scale Is the degree of the Legendre polynomial.

Identification of kinetically hot residues in proteins.

PubMed Central

Demirel, M. C.; Atilgan, A. R.; Jernigan, R. L.; Erman, B.; Bahar, I.

1998-01-01

A number of recent studies called attention to the presence of kinetically important residues underlying the formation and stabilization of folding nuclei in proteins, and to the possible existence of a correlation between conserved residues and those participating in the folding nuclei. Here, we use the Gaussian network model (GNM), which recently proved useful in describing the dynamic characteristics of proteins for identifying the kinetically hot residues in folded structures. These are the residues involved in the highest frequency fluctuations near the native state coordinates. Their high frequency is a manifestation of the steepness of the energy landscape near their native state positions. The theory is applied to a series of proteins whose kinetically important residues have been extensively explored: chymotrypsin inhibitor 2, cytochrome c, and related C2 proteins. Most of the residues previously pointed out to underlie the folding process of these proteins, and to be critically important for the stabilization of the tertiary fold, are correctly identified, indicating a correlation between the kinetic hot spots and the early forming structural elements in proteins. Additionally, a strong correlation between kinetically hot residues and loci of conserved residues is observed. Finally, residues that may be important for the stability of the tertiary structure of CheY are proposed. PMID:9865946

Kinetics of cross-slope running.

PubMed

Willwacher, Steffen; Fischer, Katina Mira; Benker, Rita; Dill, Stephan; Brüggemann, Gert-Peter

2013-11-15

The purpose of the present study was to identify kinetic responses to running on mediolaterally elevated (cross-sloped) running surfaces. Ground reaction forces (GRFs), GRF lever arms and joint moment characteristics of 19 male runners were analyzed when running at 3.5m/s on a custom-made, tiltable runway. Tilt angles of 3° and 6° for medial and lateral elevation were analyzed using a 10 camera Vicon Nexus system and a force platform. The point of force application of the GRF showed a systematic shift in the order of 1-1.5cm to either the lateral or medial aspect of the foot for lateral or medial inclinations, respectively. Consequently, the strongest significant effects of tilt orientation and level on joint kinetics and ground reaction force lever arms were identified at the ankle, knee and hip joint in the frontal plane of movement. External eversion moments at the ankle were significantly increased by 35% for 6° of lateral elevation and decreased by 16% for 6° of medial elevation. Altering the cross-slope of the running surface changed the pattern of ankle joint moments in the transversal plane. Effect sizes were on average larger for laterally elevated conditions, indicating a higher sensitivity of kinetic parameters to this kind of surface tilt. These alterations in joint kinetics should be considered in the choice of the running environment, especially for specific risk groups, like runners in rehabilitation processes. © 2013 Elsevier Ltd. All rights reserved.

Droplet Kinetic Energy from Center-Pivot Sprinklers

USDA-ARS?s Scientific Manuscript database

The kinetic energy of discrete water drops impacting a bare soil surface is generally observed to lead to a drastic reduction in water infiltration rate due to soil surface seal formation. Under center-pivot sprinkler irrigation, kinetic energy transferred to the soil prior to crop canopy developmen...

Trapped particle stability for the kinetic stabilizer

NASA Astrophysics Data System (ADS)

Berk, H. L.; Pratt, J.

2011-08-01

A kinetically stabilized axially symmetric tandem mirror (KSTM) uses the momentum flux of low-energy, unconfined particles that sample only the outer end-regions of the mirror plugs, where large favourable field-line curvature exists. The window of operation is determined for achieving magnetohydrodynamic (MHD) stability with tolerable energy drain from the kinetic stabilizer. Then MHD stable systems are analysed for stability of the trapped particle mode. This mode is characterized by the detachment of the central-cell plasma from the kinetic-stabilizer region without inducing field-line bending. Stability of the trapped particle mode is sensitive to the electron connection between the stabilizer and the end plug. It is found that the stability condition for the trapped particle mode is more constraining than the stability condition for the MHD mode, and it is challenging to satisfy the required power constraint. Furthermore, a severe power drain may arise from the necessary connection of low-energy electrons in the kinetic stabilizer to the central region.

A Comprehensive Enzyme Kinetic Exercise for Biochemistry

ERIC Educational Resources Information Center

Barton, Janice S.

2011-01-01

This article describes a comprehensive treatment of experimental enzyme kinetics strongly coupled to electronic data acquisition and use of spreadsheets to organize data and perform linear and nonlinear least-squares analyses, all in a manner that promotes development of important reasoning skills. Kinetic parameters are obtained for the stable…

Kinetic effects on the velocity-shear-driven instability

NASA Technical Reports Server (NTRS)

Wang, Z.; Pritchett, P. L.; Ashour-Abdalla, M.

1992-01-01

A comparison is made between the properties of the low-frequency long-wavelength velocity-shear-driven instability in kinetic theory and magnetohydrodynamics (MHD). The results show that the removal of adiabaticity along the magnetic field line in kinetic theory leads to modifications in the nature of the instability. Although the threshold for the instability in the two formalisms is the same, the kinetic growth rate and the unstable range in wave-number space can be larger or smaller than the MHD values depending on the ratio between the thermal speed, Alfven speed, and flow speed. When the thermal speed is much larger than the flow speed and the flow speed is larger than the Alfven speed, the kinetic formalism gives a larger maximum growth rate and broader unstable range in wave-number space. In this regime, the normalized wave number for instability can be larger than unity, while in MHD it is always less than unity. The normal mode profile in the kinetic case has a wider spatial extent across the shear layer.

Pressure dependence of the photocycle kinetics of bacteriorhodopsin.

PubMed Central

Klink, B U; Winter, R; Engelhard, M; Chizhov, I

2002-01-01

The pressure dependence of the photocycle kinetics of bacteriorhodopsin from Halobacterium salinarium was investigated at pressures up to 4 kbar at 25 degrees C and 40 degrees C. The kinetics can be adequately modeled by nine apparent rate constants, which are assigned to irreversible transitions of a single relaxation chain of nine kinetically distinguishable states P(1) to P(9). All states except P(1) and P(9) consist of two or more spectral components. The kinetic states P(2) to P(6) comprise only the two fast equilibrating spectral states L and M. From the pressure dependence, the volume differences DeltaV(o)(LM) between these two spectral states could be determined that range from DeltaV(o)(LM) = -11.4 +/- 0.7 ml/mol (P(2)) to DeltaV(o)(LM) = 14.6 +/- 2.8 mL/mol (P(6)). A model is developed that explains the dependence of DeltaV(o)(LM) on the kinetic state by the electrostriction effect of charges, which are formed and neutralized during the L/M transition. PMID:12496115

The kinetic activation-relaxation technique: an off-lattice, self-learning kinetic Monte Carlo algorithm with on-the-fly event search

NASA Astrophysics Data System (ADS)

Mousseau, Nomand

2012-02-01

While kinetic Monte Carlo algorithm has been proposed almost 40 years ago, its application in materials science has been mostly limited to lattice-based motion due to the difficulties associated with identifying new events and building usable catalogs when atoms moved into off-lattice position. Here, I present the kinetic activation-relaxation technique (kinetic ART) is an off-lattice, self-learning kinetic Monte Carlo algorithm with on-the-fly event search [1]. It combines ART nouveau [2], a very efficient unbiased open-ended activated method for finding transition states, with a topological classification [3] that allows a discrete cataloguing of local environments in complex systems, including disordered materials. In kinetic ART, local topologies are first identified for all atoms in a system. ART nouveau event searches are then launched for new topologies, building an extensive catalog of barriers and events. Next, all low energy events are fully reconstructed and relaxed, allowing to take complete account of elastic effects in the system's kinetics. Using standard kinetic Monte Carlo, the clock is brought forward and an event is then selected and applied before a new search for topologies is launched. In addition to presenting the various elements of the algorithm, I will discuss three recent applications to ion-bombarded silicon, defect diffusion in Fe and structural relaxation in amorphous silicon.[4pt] This work was done in collaboration with Laurent Karim B'eland, Peter Brommer, Fedwa El-Mellouhi, Jean-Francois Joly and Laurent Lewis.[4pt] [1] F. El-Mellouhi, N. Mousseau and L.J. Lewis, Phys. Rev. B. 78, 153202 (2008); L.K. B'eland et al., Phys. Rev. E 84, 046704 (2011).[2] G.T. Barkema and N. Mousseau, Phys. Rev. Lett. 77, 4358 (1996); E. Machado-Charry et al., J. Chem Phys. 135, 034102, (2011).[3] B.D. McKay, Congressus Numerantium 30, 45 (1981).

Thermodynamics and Kinetics of Chemical Equilibrium in Solution.

ERIC Educational Resources Information Center

Leenson, I. A.

1986-01-01

Discusses theory of thermodynamics of the equilibrium in solution and dissociation-dimerization kinetics. Describes experimental procedure including determination of molar absorptivity and equilibrium constant, reaction enthalpy, and kinetics of the dissociation-dimerization reaction. (JM)

Modeling the degradation kinetics of ascorbic acid.

PubMed

Peleg, Micha; Normand, Mark D; Dixon, William R; Goulette, Timothy R

2018-06-13

Most published reports on ascorbic acid (AA) degradation during food storage and heat preservation suggest that it follows first-order kinetics. Deviations from this pattern include Weibullian decay, and exponential drop approaching finite nonzero retention. Almost invariably, the degradation rate constant's temperature-dependence followed the Arrhenius equation, and hence the simpler exponential model too. A formula and freely downloadable interactive Wolfram Demonstration to convert the Arrhenius model's energy of activation, E a , to the exponential model's c parameter, or vice versa, are provided. The AA's isothermal and non-isothermal degradation can be simulated with freely downloadable interactive Wolfram Demonstrations in which the model's parameters can be entered and modified by moving sliders on the screen. Where the degradation is known a priori to follow first or other fixed order kinetics, one can use the endpoints method, and in principle the successive points method too, to estimate the reaction's kinetic parameters from considerably fewer AA concentration determinations than in the traditional manner. Freeware to do the calculations by either method has been recently made available on the Internet. Once obtained in this way, the kinetic parameters can be used to reconstruct the entire degradation curves and predict those at different temperature profiles, isothermal or dynamic. Comparison of the predicted concentration ratios with experimental ones offers a way to validate or refute the kinetic model and the assumptions on which it is based.

Kinetic Damage from Meteorites

NASA Technical Reports Server (NTRS)

Cooke, W.; Brown, P.; Matney, M.

2017-01-01

Comparing the natural meteorite flux at the Earth's surface to that of space debris, re-entering debris is 2 orders of magnitude less of a kinetic hazard at all but the very largest (and therefore rarest) sizes compared to natural impactors. Debris re-entries over several metric tonnes are roughly as frequent as natural impactors, but the survival fraction is expected to be much higher. Kinetic hazards from meteorites are very small, with only one recorded (indirect) injury reported. We expect fatalities to be even more rare, on the order of one person killed per several millennia. That several reports exist of small fragments/sand hitting people during meteorite falls is consistent with our prediction that this should occur every decade or so.

Kinetic Damage from Meteorites

NASA Technical Reports Server (NTRS)

Cooke, W.; Matney, M.; Brown, P.

2017-01-01

Comparing the natural meteorite flux at the Earth's surface to that of space debris, reentering debris is approx. 2 orders of magnitude less of a kinetic hazard at all but the very largest (and therefore rarest) sizes compared to natural impactors. Debris re-entries over several metric tonnes are roughly as frequent as natural impactors, but the survival fraction is expected to be much higher. Kinetic hazards from meteorites are very small, with only one recorded (indirect) injury reported. We expect fatalities to be even more rare, on the order of one person killed per several millennia. That several reports exist of small fragments/sand hitting people during meteorite falls is consistent with our prediction that this should occur every decade or so.

Troposphere-Thermosphere Tidal Coupling as Measured by the SABER Instrument on TIMED during July-September, 2002

NASA Technical Reports Server (NTRS)

Forbes, J. M.; Russell, J.; Miyahara, S.; Zhang, X.; Palo, S.; Mlynczak, M.; Mertens, C. J.; Hagan, M. E.

2005-01-01

Coupling between the troposphere and lower thermosphere due to upward-propagating tides is investigated using temperatures measured from the SABER instrument on the TIMED satellite. The data analyzed here are confined to 20-120 km altitude and +/-40 deg latitude during 20 July 20 September, 2002. Apart from the migrating (sun-synchronous) tidal components, the predominant feature seen (from the satellite frame) during this period is a wave-4 structure in longitude with extrema of up to +/-40-50 K at 110 km. Amplitudes and longitudes of maxima of this structure evolve as the satellite precesses in local time, and as the wave(s) responsible for this structure vary with time. The primary wave responsible for the wave-4 pattern is the eastward-propagating diurnal tide with zonal wavenumber s=3 (DE3). Its average amplitude distribution over the interval is quasi-symmetric about the equator, similar to that of a Kelvin wave, with maximum of about 20 K at 5 deg S and 110 km. DE3 is primarily excited by latent heating due to deep tropical convection in the troposphere. It is demonstrated that existence of DE3 is intimately connected with the predominant wave-4 longitude distribution of topography and land-sea difference at low latitudes, and an analogy is drawn with the strong presence of DE1 in Mars atmosphere, the predominant wave-2 topography on Mars, and the wave-2 patterns that dominate density measurements from the Mars Global Surveyor (MGS) spacecraft near 130 km. Additional diurnal, semidiurnal and terdiurnal nonmigrating tides are also revealed in the present study. These tidal components are most likely excited by nonlinear interactions between their migrating counterparts and the stationary planetary wave with s=1 known to exist in the Southern Hemisphere during this period just prior to the austral mid-winter stratospheric warming of 2002.

Kinetics on cocondensation of phenol and urea

Treesearch

Bunichiro Tomita; Yasunori Yoshida; Chung-Yun. Hse

1993-01-01

The chemical kinetics on cocondensation between methylolphenols and urea under acidic condition were investigated using 2- and 4-hydroxybenzyl alcohols as well as 2,4,6-trimethylolphenol as model compounds. The reactivity of the cocondensation were compared between o- and p-methylol groups. Moreover, the kinetics on self-condensations of monomethylolphenols and...

Enhancing Thai Students' Learning of Chemical Kinetics

ERIC Educational Resources Information Center

Chairam, Sanoe; Somsook, Ekasith; Coll, Richard K.

2009-01-01

Chemical kinetics is an extremely important concept for introductory chemistry courses. The literature suggests that instruction in chemical kinetics is often teacher-dominated at both the secondary school and tertiary levels, and this is the case in Thailand--the educational context for this inquiry. The work reported here seeks to shift students…

Macromolecular Crowding Modulates Actomyosin Kinetics.

PubMed

Ge, Jinghua; Bouriyaphone, Sherry D; Serebrennikova, Tamara A; Astashkin, Andrei V; Nesmelov, Yuri E

2016-07-12

Actomyosin kinetics is usually studied in dilute solutions, which do not reflect conditions in the cytoplasm. In cells, myosin and actin work in a dense macromolecular environment. High concentrations of macromolecules dramatically reduce the amount of free space available for all solutes, which results in an effective increase of the solutes' chemical potential and protein stabilization. Moreover, in a crowded solution, the chemical potential depends on the size of the solute, with larger molecules experiencing a larger excluded volume than smaller ones. Therefore, since myosin interacts with two ligands of different sizes (actin and ATP), macromolecular crowding can modulate the kinetics of individual steps of the actomyosin ATPase cycle. To emulate the effect of crowding in cells, we studied actomyosin cycle reactions in the presence of a high-molecular-weight polymer, Ficoll70. We observed an increase in the maximum velocity of the actomyosin ATPase cycle, and our transient-kinetics experiments showed that virtually all individual steps of the actomyosin cycle were affected by the addition of Ficoll70. The observed effects of macromolecular crowding on the myosin-ligand interaction cannot be explained by the increase of a solute's chemical potential. A time-resolved Förster resonance energy transfer experiment confirmed that the myosin head assumes a more compact conformation in the presence of Ficoll70 than in a dilute solution. We conclude that the crowding-induced myosin conformational change plays a major role in the changed kinetics of actomyosin ATPase. Copyright © 2016 Biophysical Society. Published by Elsevier Inc. All rights reserved.

Shortwave Radiative Fluxes, Solar-Beam Transmissions, and Aerosol Properties: TARFOX and ACE-2 Find More Absorption from Flux Radiometry than from Other Measurements

NASA Technical Reports Server (NTRS)

Russell, Philip B.; Redemann, J.; Schmid, B.; Livingston, J. M.; Bergstrom, R. W.; Ramirez, S. A.; Hipskind, R. Stephen (Technical Monitor)

2001-01-01

The Tropospheric Aerosol Radiative Forcing Observational Experiment (TARFOX) and the Second Aerosol Characterization Experiment (ACE-2) made simultaneous measurements of shortwave radiative fluxes, solar-beam transmissions, and the aerosols affecting those fluxes and transmissions. Besides the measured fluxes and transmissions, other obtained properties include aerosol scattering and absorption measured in situ at the surface and aloft; aerosol single scattering albedo retrieved from skylight radiances; and aerosol complex refractive index derived by combining profiles of backscatter, extinction, and size distribution. These measurements of North Atlantic boundary layer aerosols impacted by anthropogenic pollution revealed the following characteristic results: (1) Better agreement among different types of remote measurements of aerosols (e.g., optical depth, extinction, and backscattering from sunphotometers, satellites, and lidars) than between remote and in situ measurements; 2) More extinction derived from transmission measurements than from in situ measurements; (3) Larger aerosol absorption inferred from flux radiometry than from other measurements. When the measured relationships between downwelling flux and optical depth (or beam transmission) are used to derive best-fit single scattering albedos for the polluted boundary layer aerosol, both TARFOX and ACE-2 yield midvisible values of 0.90 +/- 0.04. The other techniques give larger single scattering albedos (i.e. less absorption) for the polluted boundary layer, with a typical result of 0.95 +/- 0.04. Although the flux-based results have the virtue of describing the column aerosol unperturbed by sampling, they are subject to questions about representativeness and other uncertainties (e.g., unknown gas absorption). Current uncertainties in aerosol single scattering albedo are large in terms of climate effects. They also have an important influence on aerosol optical depths retrieved from satellite radiances

Kinetics of resid hydrodesulfurization reactions

DOE Office of Scientific and Technical Information (OSTI.GOV)

Mohammed, A.H.A.K.; Abbas, A.A.A.; Al'-Maiya, A.S.K.

1987-07-01

In this article the authors examine the results obtained in hydrodesulfurizing an atmospheric resis from Bai-Hassan crude on Ni-Mo/Al/sub 2/O/sub 3/ catalyst at 320-420/sup 0/C, feedstock space velocity 0.37-2.6 h/sup -1/, pressure 6.1 MPa, and hydrogen/feed ratio 300 liters/liter, in a single-pass downflow reactor with a stationary bed of catalyst. Also, they give certain thermodynamic characteristics for desulfurization, demetalization, and deasphalting of this resid. The kinetic model describing most accurately the kinetics of the different reactions will be examined.

Nucleation and Growth Kinetics from LaMer Burst Data.

PubMed

Chu, Daniel B K; Owen, Jonathan S; Peters, Baron

2017-10-12

In LaMer burst nucleation, the individual nucleation events happen en masse, quasi-simultaneously, and at nearly identical homogeneous conditions. These properties make LaMer burst nucleation important for applications that require monodispersed particles and also for theoretical analyses. Sugimoto and co-workers predicted that the number of nuclei generated during a LaMer burst depends only on the solute supply rate and the growth rate, independent of the nucleation kinetics. Some experiments confirm that solute supply kinetics control the number of nuclei, but flaws in the original theoretical analysis raise questions about the predicted roles of growth and nucleation kinetics. We provide a rigorous analysis of the coupled equations that govern concentrations of nuclei and solutes. Our analysis confirms that the number of nuclei is largely determined by the solute supply and growth rates, but our predicted relationship differs from that of Sugimoto et al. Moreover, we find that additional nucleus size dependent corrections should emerge in systems with slow growth kinetics. Finally, we show how the nucleation kinetics determine the particle size distribution. We suggest that measured particle size distributions might therefore provide ways to test theoretical models of homogeneous nucleation kinetics.

Mechanisms of kinetic stabilization by the drugs paclitaxel and vinblastine.

PubMed

Castle, Brian T; McCubbin, Seth; Prahl, Louis S; Bernens, Jordan N; Sept, David; Odde, David J

2017-05-01

Microtubule-targeting agents (MTAs), widely used as biological probes and chemotherapeutic drugs, bind directly to tubulin subunits and "kinetically stabilize" microtubules, suppressing the characteristic self-assembly process of dynamic instability. However, the molecular-level mechanisms of kinetic stabilization are unclear, and the fundamental thermodynamic and kinetic requirements for dynamic instability and its elimination by MTAs have yet to be defined. Here we integrate a computational model for microtubule assembly with nanometer-scale fluorescence microscopy measurements to identify the kinetic and thermodynamic basis of kinetic stabilization by the MTAs paclitaxel, an assembly promoter, and vinblastine, a disassembly promoter. We identify two distinct modes of kinetic stabilization in live cells, one that truly suppresses on-off kinetics, characteristic of vinblastine, and the other a "pseudo" kinetic stabilization, characteristic of paclitaxel, that nearly eliminates the energy difference between the GTP- and GDP-tubulin thermodynamic states. By either mechanism, the main effect of both MTAs is to effectively stabilize the microtubule against disassembly in the absence of a robust GTP cap. © 2017 Castle et al. This article is distributed by The American Society for Cell Biology under license from the author(s). Two months after publication it is available to the public under an Attribution–Noncommercial–Share Alike 3.0 Unported Creative Commons License (http://creativecommons.org/licenses/by-nc-sa/3.0).

BTE-OX biodegradation kinetics with MTBE through bioaugmentation.

PubMed

Acuna-Askar, K; Villarreal-Chiu, J F; Gracia-Lozano, M V; Garza-Gonzalez, M T; Chavez-Gomez, B; Rodriguez-Sanchez, I P; Barrera-Saldana, H A

2004-01-01

The biodegradation kinetics of BTE-oX and MTBE, mixed all together, in the presence of bioaugmented bacterial populations as high as 880 mg/L VSS was evaluated. The effect of soil in aqueous samples and the effect of Tergitol NP-10 on substrate biodegradation rates were also evaluated. Biodegradation kinetics was evaluated for 36 hours, every 6 hours. Benzene and o-xylene biodegradation followed a first-order one-phase kinetic model, whereas toluene and ethylbenzene biodegradation was well described by a first-order two-phase kinetic model in all samples. MTBE followed a zero-order removal kinetic model in all samples. The presence of soil in aqueous samples retarded BTE-oX removal rates, with the highest negative effect on o-xylene. The presence of soil enhanced MTBE removal rate. The addition of Tergitol NP-10 to aqueous samples containing soil had a positive effect on substrate removal rate in all samples. Substrate percent removals ranged from 95.4-99.7% for benzene, toluene and ethylbenzene. O-xylene and MTBE percent removals ranged from 55.9-90.1% and 15.6-30.1%, respectively.

General solutions for the oxidation kinetics of polymers

DOE Office of Scientific and Technical Information (OSTI.GOV)

Gillen, K.T.; Clough, R.L.; Wise, J.

1996-08-01

The simplest general kinetic schemes applicable to the oxidation of polymers are presented, discussed and analyzed in terms of the underlying kinetic assumptions. For the classic basic autoxidation scheme (BAS), which involves three bimolecular termination steps and is applicable mainly to unstabilized polymers, typical assumptions used singly or in groups include (1) long kinetic chain length, (2) a specific ratio of the termination rate constants and (3) insensitivity to the oxygen concentration (e.g., domination by a single termination step). Steady-state solutions for the rate of oxidation are given in terms of one, two, three, or four parameters, corresponding respectively tomore » three, two, one, or zero kinetic assumptions. The recently derived four-parameter solution predicts conditions yielding unusual dependencies of the oxidation rate on oxygen concentration and on initiation rate, as well as conditions leading to some unusual diffusion-limited oxidation profile shapes. For stabilized polymers, unimolecular termination schemes are typically more appropriate than bimolecular. Kinetics incorporating unimolecular termination reactions are shown to result in very simple oxidation expressions which have been experimentally verified for both radiation-initiated oxidation of an EPDM and thermoxidative degradation of nitrile and chloroprene elastomers.« less

Continuum kinetic and multi-fluid simulations of classical sheaths

DOE Office of Scientific and Technical Information (OSTI.GOV)

Cagas, P.; Hakim, A.; Juno, J.

The kinetic study of plasma sheaths is critical, among other things, to understand the deposition of heat on walls, the effect of sputtering, and contamination of the plasma with detrimental impurities. The plasma sheath also provides a boundary condition and can often have a significant global impact on the bulk plasma. In this paper, kinetic studies of classical sheaths are performed with the continuum kinetic code, Gkeyll, which directly solves the Vlasov-Maxwell equations. The code uses a novel version of the finite-element discontinuous Galerkin scheme that conserves energy in the continuous-time limit. The fields are computed using Maxwell equations. Ionizationmore » and scattering collisions are included; however, surface effects are neglected. The aim of this work is to introduce the continuum kinetic method and compare its results with those obtained from an already established finite-volume multi-fluid model also implemented in Gkeyll. Novel boundary conditions on the fluids allow the sheath to form without specifying wall fluxes, so the fluids and fields adjust self-consistently at the wall. Our work demonstrates that the kinetic and fluid results are in agreement for the momentum flux, showing that in certain regimes, a multifluid model can be a useful approximation for simulating the plasma boundary. There are differences in the electrostatic potential between the fluid and kinetic results. Further, the direct solutions of the distribution function presented here highlight the non-Maxwellian distribution of electrons in the sheath, emphasizing the need for a kinetic model. The densities, velocities, and the potential show a good agreement between the kinetic and fluid results. But, kinetic physics is highlighted through higher moments such as parallel and perpendicular temperatures which provide significant differences from the fluid results in which the temperature is assumed to be isotropic. Besides decompression cooling, the heat flux is shown to

Continuum kinetic and multi-fluid simulations of classical sheaths

DOE PAGES

Cagas, P.; Hakim, A.; Juno, J.; ...

2017-02-21

The kinetic study of plasma sheaths is critical, among other things, to understand the deposition of heat on walls, the effect of sputtering, and contamination of the plasma with detrimental impurities. The plasma sheath also provides a boundary condition and can often have a significant global impact on the bulk plasma. In this paper, kinetic studies of classical sheaths are performed with the continuum kinetic code, Gkeyll, which directly solves the Vlasov-Maxwell equations. The code uses a novel version of the finite-element discontinuous Galerkin scheme that conserves energy in the continuous-time limit. The fields are computed using Maxwell equations. Ionizationmore » and scattering collisions are included; however, surface effects are neglected. The aim of this work is to introduce the continuum kinetic method and compare its results with those obtained from an already established finite-volume multi-fluid model also implemented in Gkeyll. Novel boundary conditions on the fluids allow the sheath to form without specifying wall fluxes, so the fluids and fields adjust self-consistently at the wall. Our work demonstrates that the kinetic and fluid results are in agreement for the momentum flux, showing that in certain regimes, a multifluid model can be a useful approximation for simulating the plasma boundary. There are differences in the electrostatic potential between the fluid and kinetic results. Further, the direct solutions of the distribution function presented here highlight the non-Maxwellian distribution of electrons in the sheath, emphasizing the need for a kinetic model. The densities, velocities, and the potential show a good agreement between the kinetic and fluid results. But, kinetic physics is highlighted through higher moments such as parallel and perpendicular temperatures which provide significant differences from the fluid results in which the temperature is assumed to be isotropic. Besides decompression cooling, the heat flux is shown to

Stratospheric O3 changes during 2001-2010: The small role of solar flux variations in a CTM

NASA Astrophysics Data System (ADS)

Dhomse, Sandip; Chipperfield, Martyn; Feng, Wuhu; Ball, William; Unruh, Yvonne; Haigh, Joanna; Krivova, Natalie; Solanki, Sami

2013-04-01

Solar spectral fluxes (or irradiance) measured by the SOlar Radiation and Climate Experiment (SORCE) shows different variability at ultraviolet (UV) wavelengths compared to other irradiance measurements and models (e.g. NRL, SATIRE-S). Some modelling studies have suggested that stratospheric O3 changes during solar cycle 23 (1996-2008) can only be reproduced if SORCE solar fluxes are used. We have used a 3-D chemical transport model (CTM), forced by meteorology from the European Centre for Medium-Range Weather Forecasts (ECMWF), to simulate stratospheric O3 using 3 different solar flux datasets (SORCE, NRL-SSI and SATIRE-S). Simulated O3 changes are compared with Microwave Limb Sounder (MLS) and Sounding of the Atmosphere using Broadband Emission Radiometry (SABER) satellite data. Modelled O3 anomalies using all solar flux datasets show good agreement with the observations, despite the different flux variations. A notable feature during this period is a robust positive solar signal in the tropical middle stratosphere. The CTM reproduces these changes through dynamical information contained in the analyses. Changes in the upper stratosphere cannot be used to discriminate between solar flux datasets due to large uncertainties in the O3 observations. Overall this study suggests that the UV variations detected by SORCE are not necessary to reproduce observed stratospheric O3 changes during 2001-2010.

Contributions of the Higher Vibrational Levels of Nitric Oxide to the Radiative Cooling of the Thermosphere

NASA Astrophysics Data System (ADS)

Venkataramani, K.; Yonker, J. D.; Bailey, S. M.

2014-12-01

The 5.3μm emission from the vibrational levels of nitric oxide (NO) and the 15μm emission from CO2 are known to be the dominant sources of cooling in the thermosphere above 100 km. The 5.3μm emission is primarily produced by the radiative de-excitation of NO from its first vibrational level, which in turn is mainly populated by the collisions of NO with atomic oxygen. However, the reaction of atomic nitrogen (N(4S) and N(2D)) with O2 yields vibrationally excited NO with v>1, resulting in a radiative cascade which produces more than one 5.3μm photon per vibrationally excited NO molecule. This chemiluminescence is approximately 20% in magnitude of the emission produced by thermal collisions. These additional sources of the 5.3μm emission are introduced into a one dimensional photochemical model and the Thermosphere-Ionosphere-Electrodynamics General Circulation Model (TIE-GCM) to assess their variability with latitude and solar activity, and to also understand their effect on the thermospheric energy budget. The results from the models are compared with data from the Sounding of the Atmosphere using Broadband Emission Radiometry (SABER) experiment on-board the Thermosphere Ionosphere Mesosphere Energetics and Dynamics (TIMED) satellite, which has been making measurements of the infrared radiative response of the mesosphere and thermosphere to solar inputs since 2002.

Development of a mobile Doppler lidar system for wind and temperature measurements at 30-70 km

NASA Astrophysics Data System (ADS)

Yan, Zhaoai; Hu, Xiong; Guo, Wenjie; Guo, Shangyong; Cheng, Yongqiang; Gong, Jiancun; Yue, Jia

2017-02-01

A mobile Doppler lidar system has been developed to simultaneously measure zonal and meridional winds and temperature from 30 to 70 km. Each of the two zonal and meridional wind subsystems employs a 15 W power, 532 nm laser and a 1 m diameter telescope. Iodine vapor filters are used to stabilize laser frequency and to detect the Doppler shift of backscattered signal. The integration method is used for temperature measurement. Experiments were carried out using the mobile Doppler lidar in August 2014 at Qinghai, China (91°E, 38°N). The zonal wind was measured from 20 to 70 km at a 3 km spatial resolution and 2 h temporal resolution. The measurement error is about 0.5 m/s at 30 km, and 10 m/s at 70 km. In addition, the temperature was measured from 30 to 70 km at 1 km spatial resolution and 1 h temporal resolution. The temperature measurement error is about 0.4 K at 30 km, and 8.0 K at 70 km. Comparison of the lidar results with the temperature of the Sounding of the Atmosphere using Broadband Emission Radiometry (SABER), the zonal wind of the Modern-Era Retrospective Analysis for Re-search and Applications (MERRA), and radiosonde zonal wind shows good agreement, indicating that the Doppler lidar results are reliable.

Kinetic: A system code for analyzing nuclear thermal propulsion rocket engine transients

NASA Astrophysics Data System (ADS)

Schmidt, Eldon; Lazareth, Otto; Ludewig, Hans

The topics are presented in viewgraph form and include the following: outline of kinetic code; a kinetic information flow diagram; kinetic neutronic equations; turbopump/nozzle algorithm; kinetic heat transfer equations per node; and test problem diagram.

Calculation of kinetic rate constants from thermodynamic data

NASA Technical Reports Server (NTRS)

Marek, C. John

1995-01-01

A new scheme for relating the absolute value for the kinetic rate constant k to the thermodynamic constant Kp is developed for gases. In this report the forward and reverse rate constants are individually related to the thermodynamic data. The kinetic rate constants computed from thermodynamics compare well with the current kinetic rate constants. This method is self consistent and does not have extensive rules. It is first demonstrated and calibrated by computing the HBr reaction from H2 and Br2. This method then is used on other reactions.

NLTE4 Plasma Population Kinetics Database

National Institute of Standards and Technology Data Gateway

SRD 159 NLTE4 Plasma Population Kinetics Database (Web database for purchase)   This database contains benchmark results for simulation of plasma population kinetics and emission spectra. The data were contributed by the participants of the 4th Non-LTE Code Comparison Workshop who have unrestricted access to the database. The only limitation for other users is in hidden labeling of the output results. Guest users can proceed to the database entry page without entering userid and password.

Enzymatic Kinetic Isotope Effects from First-Principles Path Sampling Calculations.

PubMed

Varga, Matthew J; Schwartz, Steven D

2016-04-12

In this study, we develop and test a method to determine the rate of particle transfer and kinetic isotope effects in enzymatic reactions, specifically yeast alcohol dehydrogenase (YADH), from first-principles. Transition path sampling (TPS) and normal mode centroid dynamics (CMD) are used to simulate these enzymatic reactions without knowledge of their reaction coordinates and with the inclusion of quantum effects, such as zero-point energy and tunneling, on the transferring particle. Though previous studies have used TPS to calculate reaction rate constants in various model and real systems, it has not been applied to a system as large as YADH. The calculated primary H/D kinetic isotope effect agrees with previously reported experimental results, within experimental error. The kinetic isotope effects calculated with this method correspond to the kinetic isotope effect of the transfer event itself. The results reported here show that the kinetic isotope effects calculated from first-principles, purely for barrier passage, can be used to predict experimental kinetic isotope effects in enzymatic systems.

Kinetic Tetrazolium Microtiter Assay

NASA Technical Reports Server (NTRS)

Pierson, Duane L.; Stowe, Raymond; Koenig, David

1993-01-01

Kinetic tetrazolium microtiter assay (KTMA) involves use of tetrazolium salts and Triton X-100 (or equivalent), nontoxic, in vitro color developer solubilizing colored metabolite formazan without injuring or killing metabolizing cells. Provides for continuous measurement of metabolism and makes possible to determine rate of action of antimicrobial agent in real time as well as determines effective inhibitory concentrations. Used to monitor growth after addition of stimulatory compounds. Provides for kinetic determination of efficacy of biocide, greatly increasing reliability and precision of results. Also used to determine relative effectiveness of antimicrobial agent as function of time. Capability of generating results on day of test extremely important in treatment of water and waste, disinfection of hospital rooms, and in pharmaceutical, agricultural, and food-processing industries. Assay also used in many aspects of cell biology.

Application of Chemical Kinetics to Deterioration of Foods.

ERIC Educational Resources Information Center

Labuza, T. P.

1984-01-01

Possible modes of food deterioration (such as microbial decay, nonenzymatic browning, senescence, lipid oxidation) are reviewed. A basic mathematical approach to the kinetics of food deterioration, kinetic approach to accelerating shelf-life deterioration, and shelf-life predictions are discussed. (JN)

Drift-free kinetic equations for turbulent dispersion

NASA Astrophysics Data System (ADS)

Bragg, A.; Swailes, D. C.; Skartlien, R.

2012-11-01

The dispersion of passive scalars and inertial particles in a turbulent flow can be described in terms of probability density functions (PDFs) defining the statistical distribution of relevant scalar or particle variables. The construction of transport equations governing the evolution of such PDFs has been the subject of numerous studies, and various authors have presented formulations for this type of equation, usually referred to as a kinetic equation. In the literature it is often stated, and widely assumed, that these PDF kinetic equation formulations are equivalent. In this paper it is shown that this is not the case, and the significance of differences among the various forms is considered. In particular, consideration is given to which form of equation is most appropriate for modeling dispersion in inhomogeneous turbulence and most consistent with the underlying particle equation of motion. In this regard the PDF equations for inertial particles are considered in the limit of zero particle Stokes number and assessed against the fully mixed (zero-drift) condition for fluid points. A long-standing question regarding the validity of kinetic equations in the fluid-point limit is answered; it is demonstrated formally that one version of the kinetic equation (derived using the Furutsu-Novikov method) provides a model that satisfies this zero-drift condition exactly in both homogeneous and inhomogeneous systems. In contrast, other forms of the kinetic equation do not satisfy this limit or apply only in a limited regime.

Drift-free kinetic equations for turbulent dispersion.

PubMed

Bragg, A; Swailes, D C; Skartlien, R

2012-11-01

The dispersion of passive scalars and inertial particles in a turbulent flow can be described in terms of probability density functions (PDFs) defining the statistical distribution of relevant scalar or particle variables. The construction of transport equations governing the evolution of such PDFs has been the subject of numerous studies, and various authors have presented formulations for this type of equation, usually referred to as a kinetic equation. In the literature it is often stated, and widely assumed, that these PDF kinetic equation formulations are equivalent. In this paper it is shown that this is not the case, and the significance of differences among the various forms is considered. In particular, consideration is given to which form of equation is most appropriate for modeling dispersion in inhomogeneous turbulence and most consistent with the underlying particle equation of motion. In this regard the PDF equations for inertial particles are considered in the limit of zero particle Stokes number and assessed against the fully mixed (zero-drift) condition for fluid points. A long-standing question regarding the validity of kinetic equations in the fluid-point limit is answered; it is demonstrated formally that one version of the kinetic equation (derived using the Furutsu-Novikov method) provides a model that satisfies this zero-drift condition exactly in both homogeneous and inhomogeneous systems. In contrast, other forms of the kinetic equation do not satisfy this limit or apply only in a limited regime.

Catastrophic Disruption Threshold and Maximum Deflection from Kinetic Impact

NASA Astrophysics Data System (ADS)

Cheng, A. F.

2017-12-01

The use of a kinetic impactor to deflect an asteroid on a collision course with Earth was described in the NASA Near-Earth Object Survey and Deflection Analysis of Alternatives (2007) as the most mature approach for asteroid deflection and mitigation. The NASA DART mission will demonstrate asteroid deflection by kinetic impact at the Potentially Hazardous Asteroid 65803 Didymos in October, 2022. The kinetic impactor approach is considered to be applicable with warning times of 10 years or more and with hazardous asteroid diameters of 400 m or less. In principle, a larger kinetic impactor bringing greater kinetic energy could cause a larger deflection, but input of excessive kinetic energy will cause catastrophic disruption of the target, leaving possibly large fragments still on collision course with Earth. Thus the catastrophic disruption threshold limits the maximum deflection from a kinetic impactor. An often-cited rule of thumb states that the maximum deflection is 0.1 times the escape velocity before the target will be disrupted. It turns out this rule of thumb does not work well. A comparison to numerical simulation results shows that a similar rule applies in the gravity limit, for large targets more than 300 m, where the maximum deflection is roughly the escape velocity at momentum enhancement factor β=2. In the gravity limit, the rule of thumb corresponds to pure momentum coupling (μ=1/3), but simulations find a slightly different scaling μ=0.43. In the smaller target size range that kinetic impactors would apply to, the catastrophic disruption limit is strength-controlled. A DART-like impactor won't disrupt any target asteroid down to significantly smaller size than the 50 m below which a hazardous object would not penetrate the atmosphere in any case unless it is unusually strong.

Enzyme Kinetics in Microgravity

NASA Astrophysics Data System (ADS)

Liu, C. C.; Licata, V. J.

2010-04-01

The kinetics of some enzymes have been found to be enhanced by the microgravity environment. This is a relatively small effect, but is sufficient to have physiological effects and to impact pharmaceutical therapy in microgravity.

Kinetic energy budgets near the turbulent/nonturbulent interface in jets

NASA Astrophysics Data System (ADS)

Taveira, Rodrigo R.; da Silva, Carlos B.

2013-01-01

The dynamics of the kinetic energy near the turbulent/nonturbulent (T/NT) interface separating the turbulent from the irrotational flow regions is analysed using three direct numerical simulations of turbulent planar jets, with Reynolds numbers based on the Taylor micro-scale across the jet shear layer in the range Reλ ≈ 120-160. Important levels of kinetic energy are already present in the irrotational region near the T/NT interface. The mean pressure and kinetic energy are well described by the Bernoulli equation in this region and agree with recent results obtained from rapid distortion theory in the turbulent region [M. A. C. Teixeira and C. B. da Silva, "Turbulence dynamics near a turbulent/non-turbulent interface," J. Fluid Mech. 695, 257-287 (2012)], 10.1017/jfm.2012.17 while the normal Reynolds stresses agree with the theoretical predictions from Phillips ["The irrotational motion outside a free turbulent boundary," Proc. Cambridge Philos. Soc. 51, 220 (1955)], 10.1017/S0305004100030073. The use of conditional statistics in relation to the distance from the T/NT interface allow a detailed study of the build up of kinetic energy across the T/NT interface, pointing to a very different picture than using classical statistics. Conditional kinetic energy budgets show that apart from the viscous dissipation of kinetic energy, the maximum of all the mechanisms governing the kinetic energy are concentrated in a very narrow region distancing about one to two Taylor micro-scales from the T/NT interface. The (total and fluctuating) kinetic energy starts increasing in the irrotational region by pressure-velocity interactions - a mechanism that can act at distance, and continue to grow by advection (for the total kinetic energy) and turbulent diffusion (for the turbulent kinetic energy) inside the turbulent region. These mechanisms tend to occur preferentially around the core of the large-scale vortices existing near T/NT interface. The production of turbulent

Multienzyme kinetics and sequential metabolism.

PubMed

Wienkers, Larry C; Rock, Brooke

2014-01-01

Enzymes are the catalysts of biological systems and are extremely efficient. A typical enzyme accelerates the rate of a reaction by factors of at least a million compared to the rate of the same reaction in the absence of the enzyme. In contrast to traditional catalytic enzymes, the family of cytochrome P450 (CYP) enzymes are catalytically promiscuous, and thus they possess remarkable versatility in substrates. The great diversity of reactions catalyzed by CYP enzymes appears to be based on two unique properties of these heme proteins, the ability of their iron to exist under multiple oxidation states with different reactivities and a flexible active site that can accommodate a wide variety of substrates. Herein is a discussion of two distinct types of kinetics observed with CYP enzymes. The first example is of CYP complex kinetic profiles when multiple CYP enzymes form the sample product. The second is sequential metabolism, in other words, the formation of multiple products from one CYP enzyme. Given the degree of CYP enzyme promiscuity, it is hardly surprising that there is also a high degree of complex kinetic profiles generated during the catalytic cycle.

Water sorption equilibria and kinetics of henna leaves

NASA Astrophysics Data System (ADS)

Sghaier, Khamsa; Peczalski, Roman; Bagane, Mohamed

2018-05-01

In this work, firstly the sorption isotherms of henna leaves were determined using a dynamic vapor sorption ( DVS) device at 3 temperatures (30, 40, 50 °C). The equilibrium data were well fitted by the GAB model. Secondly, drying kinetics were measured using a pilot convective dryer for 3 air temperatures (same as above), 3 velocities (0.5, 1, 1.42 m/s) and 4 relative humidities (20, 30, 35, 40%). The drying kinetic coefficients were identified by fitting the DVS and pilot dryer data by Lewis semi-empirical model. In order to compare the obtained kinetic parameters with literature, the water diffusivities were also identified by fitting the data by the simplified solution of fickian diffusion equation. The identified kinetic coefficient was mainly dependent on air temperature and velocity what proved that it represented rather the external transfer and not the internal one.

Comments on Static vs Kinetic Friction

NASA Astrophysics Data System (ADS)

Kessler, Gabriel

2009-09-01

I'm writing to comment on the article published in the March edition of The Physics Teacher titled "Choose Wisely: Static or Kinetic Friction—The Power of Dimensionless Plots." As I was reading the article, something caught my eye that I couldn't reconcile with. It was the phrase on page 160 in the first column near the bottom. The statement was that the experimental value for the coefficient of kinetic friction was "unexpectedly greater than the coefficient of static friction!"

Thermodynamic and kinetic analysis of heterogeneous photocatalysis for semiconductor systems.

PubMed

Liu, Baoshun; Zhao, Xiujian; Terashima, Chiaki; Fujishima, Akira; Nakata, Kazuya

2014-05-21

Since the report of the Honda-Fujishima effect, heterogeneous photocatalysis has attracted much attention around the world because of its potential energy and environmental applications. Although great progresses have been made in recent years, most were focused on preparing highly-active photocatalysts and investigating visible light utilization. In fact, we are still unclear on the thermodynamic and kinetic nature of photocatalysis to date, which sometimes leads to misunderstandings for experimental results. It is timely to give a review and discussion on the thermodynamics and kinetics of photocatalysis, so as to direct future researches. However, there is an absence of a detailed review on this topic until now. In this article, we tried to review and discuss the thermodynamics and kinetics of photocatalysis. We explained the thermodynamic driving force of photocatalysis, and distinguished the functions of light and heat in photocatalysis. The Langmuir-Hinshelwood kinetic model, the ˙OH oxidation mechanism, and the direct-indirect (D-I) kinetic model were reviewed and compared. Some applications of the D-I model to study photocatalytic kinetics were also discussed. The electron transport mode and its importance in photocatalysis were investigated. Finally, the intrinsic relation between the kinetics and the thermodynamics of photocatalytic reactions was discussed.

Structural kinetic modeling of metabolic networks.

PubMed

Steuer, Ralf; Gross, Thilo; Selbig, Joachim; Blasius, Bernd

2006-08-08

To develop and investigate detailed mathematical models of metabolic processes is one of the primary challenges in systems biology. However, despite considerable advance in the topological analysis of metabolic networks, kinetic modeling is still often severely hampered by inadequate knowledge of the enzyme-kinetic rate laws and their associated parameter values. Here we propose a method that aims to give a quantitative account of the dynamical capabilities of a metabolic system, without requiring any explicit information about the functional form of the rate equations. Our approach is based on constructing a local linear model at each point in parameter space, such that each element of the model is either directly experimentally accessible or amenable to a straightforward biochemical interpretation. This ensemble of local linear models, encompassing all possible explicit kinetic models, then allows for a statistical exploration of the comprehensive parameter space. The method is exemplified on two paradigmatic metabolic systems: the glycolytic pathway of yeast and a realistic-scale representation of the photosynthetic Calvin cycle.

Kinetic Modeling using BioPAX ontology

PubMed Central

Ruebenacker, Oliver; Moraru, Ion. I.; Schaff, James C.; Blinov, Michael L.

2010-01-01

Thousands of biochemical interactions are available for download from curated databases such as Reactome, Pathway Interaction Database and other sources in the Biological Pathways Exchange (BioPAX) format. However, the BioPAX ontology does not encode the necessary information for kinetic modeling and simulation. The current standard for kinetic modeling is the System Biology Markup Language (SBML), but only a small number of models are available in SBML format in public repositories. Additionally, reusing and merging SBML models presents a significant challenge, because often each element has a value only in the context of the given model, and information encoding biological meaning is absent. We describe a software system that enables a variety of operations facilitating the use of BioPAX data to create kinetic models that can be visualized, edited, and simulated using the Virtual Cell (VCell), including improved conversion to SBML (for use with other simulation tools that support this format). PMID:20862270

Predicting DNA hybridization kinetics from sequence

NASA Astrophysics Data System (ADS)

Zhang, Jinny X.; Fang, John Z.; Duan, Wei; Wu, Lucia R.; Zhang, Angela W.; Dalchau, Neil; Yordanov, Boyan; Petersen, Rasmus; Phillips, Andrew; Zhang, David Yu

2018-01-01

Hybridization is a key molecular process in biology and biotechnology, but so far there is no predictive model for accurately determining hybridization rate constants based on sequence information. Here, we report a weighted neighbour voting (WNV) prediction algorithm, in which the hybridization rate constant of an unknown sequence is predicted based on similarity reactions with known rate constants. To construct this algorithm we first performed 210 fluorescence kinetics experiments to observe the hybridization kinetics of 100 different DNA target and probe pairs (36 nt sub-sequences of the CYCS and VEGF genes) at temperatures ranging from 28 to 55 °C. Automated feature selection and weighting optimization resulted in a final six-feature WNV model, which can predict hybridization rate constants of new sequences to within a factor of 3 with ∼91% accuracy, based on leave-one-out cross-validation. Accurate prediction of hybridization kinetics allows the design of efficient probe sequences for genomics research.

Transient Kinetics Define a Complete Kinetic Model for Protein Arginine Methyltransferase 1*

PubMed Central

Hu, Hao; Luo, Cheng; Zheng, Y. George

2016-01-01

Protein arginine methyltransferases (PRMTs) are the enzymes responsible for posttranslational methylation of protein arginine residues in eukaryotic cells, particularly within the histone tails. A detailed mechanistic model of PRMT-catalyzed methylation is currently lacking, but it is essential for understanding the functions of PRMTs in various cellular pathways and for efficient design of PRMT inhibitors as potential treatments for a range of human diseases. In this work, we used stopped-flow fluorescence in combination with global kinetic simulation to dissect the transient kinetics of PRMT1, the predominant type I arginine methyltransferase. Several important mechanistic insights were revealed. The cofactor and the peptide substrate bound to PRMT1 in a random manner and then followed a kinetically preferred pathway to generate the catalytic enzyme-cofactor-substrate ternary complex. Product release proceeded in an ordered fashion, with peptide dissociation followed by release of the byproduct S-adenosylhomocysteine. Importantly, the dissociation rate of the monomethylated intermediate from the ternary complex was much faster than the methyl transfer. Such a result provided direct evidence for distributive arginine dimethylation, which means the monomethylated substrate has to be released to solution and rebind with PRMT1 before it undergoes further methylation. In addition, cofactor binding involved a conformational transition, likely an open-to-closed conversion of the active site pocket. Further, the histone H4 peptide bound to the two active sites of the PRMT1 homodimer with differential affinities, suggesting a negative cooperativity mechanism of substrate binding. These findings provide a new mechanistic understanding of how PRMTs interact with their substrates and transfer methyl groups. PMID:27834681

Kinetic synergistic transitions in the Ostwald ripening processes

NASA Astrophysics Data System (ADS)

Sachkov, I. N.; Turygina, V. F.; Dolganov, A. N.

2018-01-01

There is proposed approach to mathematical description of the kinetic transitions in Ostwald ripening processes of volatile substance in nonuniformly heated porous materials. It is based upon the finite element method. There are implemented computer software. The main feature of the software is to calculate evaporation and condensation fluxes on the walls of a nonuniformly heated cylindrical capillary. Kinetic transitions are detected for three modes of volatile substances migration which are different by condensation zones location. There are controlling dimensionless parameters of the kinetic transition which are revealed during research. There is phase diagram of the Ostwald ripening process modes realization.

Kinetics of human immunodeficiency virus budding and assembly

NASA Astrophysics Data System (ADS)

Zhang, Rui; Nguyen, Toan

2009-03-01

Human immunodeficiency virus (HIV) belongs to a large family of RNA viruses, retroviruses. Unlike budding of regular enveloped viruses, retroviruses bud concurrently with the assembly of retroviral capsids on the cell membrane. The kinetics of HIV (and other retroviruses) budding and assembly is therefore strongly affected by the elastic energy of the membrane and fundamentally different from regular viruses. The main result of this work shows that the kinetics is tunable from a fast budding process to a slow and effectively trapped partial budding process, by varying the attractive energy of retroviral proteins (call Gags), relative to the membrane elastic energy. When the Gag-Gag attraction is relatively high, the membrane elastic energy provides a kinetic barrier for the two pieces of the partial capsids to merge. This energy barrier determines the slowest step in the kinetics and the budding time. In the opposite limit, the membrane elastic energy provides not only a kinetic energy barrier, but a free energy barrier. The budding and assembly is effectively trapped at local free energy minimum, corresponding to a partially budded state. The time scale to escape from this metastable state is exponentially large. In both cases, our result fit with experimental measurements pretty well.

Thermoluminescence kinetics of pyrite (FeS2)

NASA Astrophysics Data System (ADS)

Silverman, A. N.; Levy, P. W.; Kierstead, J. A.

Thermoluminescence of pyrite (FeS2) was investigated to study the kinetics of single peak glow curves. The material used normally exhibits one large and four small peaks. However a glow curve can be obtained with only the large single peak that is suitable for testing thermoluminescence kinetics. Glow curves from aliquots of a single natural pyrite crystal studied in detail contain two low intensity thermoluminescence (TL) peaks at approximately 90 and 250 C, and two chemiluminescence (CL) peaks at approximately 350 and 430 C. The CL peaks are largely removable by initially heating the sample chamber under vacuum, pumping through liquid nitrogen traps, and recording glow curves immediately after helium is introduced, procedures which reduce system contaminants that react with pyrite. The shape, the variation of the temperature of the peak maximum (T(sub max)) with dose, and the retrapping to recombination cross section ratio (sigma) of the large 250 C peak are better described by the general one trap (GOT) kinetic equation, the basic equation from which the 1st and 2nd order kinetic equations are obtained as special cases, than by the 1st and 2nd order equations.

Rate kernel theory for pseudo-first-order kinetics of diffusion-influenced reactions and application to fluorescence quenching kinetics.

PubMed

Yang, Mino

2007-06-07

Theoretical foundation of rate kernel equation approaches for diffusion-influenced chemical reactions is presented and applied to explain the kinetics of fluorescence quenching reactions. A many-body master equation is constructed by introducing stochastic terms, which characterize the rates of chemical reactions, into the many-body Smoluchowski equation. A Langevin-type of memory equation for the density fields of reactants evolving under the influence of time-independent perturbation is derived. This equation should be useful in predicting the time evolution of reactant concentrations approaching the steady state attained by the perturbation as well as the steady-state concentrations. The dynamics of fluctuation occurring in equilibrium state can be predicted by the memory equation by turning the perturbation off and consequently may be useful in obtaining the linear response to a time-dependent perturbation. It is found that unimolecular decay processes including the time-independent perturbation can be incorporated into bimolecular reaction kinetics as a Laplace transform variable. As a result, a theory for bimolecular reactions along with the unimolecular process turned off is sufficient to predict overall reaction kinetics including the effects of unimolecular reactions and perturbation. As the present formulation is applied to steady-state kinetics of fluorescence quenching reactions, the exact relation between fluorophore concentrations and the intensity of excitation light is derived.

Breakdown parameter for kinetic modeling of multiscale gas flows.

PubMed

Meng, Jianping; Dongari, Nishanth; Reese, Jason M; Zhang, Yonghao

2014-06-01

Multiscale methods built purely on the kinetic theory of gases provide information about the molecular velocity distribution function. It is therefore both important and feasible to establish new breakdown parameters for assessing the appropriateness of a fluid description at the continuum level by utilizing kinetic information rather than macroscopic flow quantities alone. We propose a new kinetic criterion to indirectly assess the errors introduced by a continuum-level description of the gas flow. The analysis, which includes numerical demonstrations, focuses on the validity of the Navier-Stokes-Fourier equations and corresponding kinetic models and reveals that the new criterion can consistently indicate the validity of continuum-level modeling in both low-speed and high-speed flows at different Knudsen numbers.

Collective behaviours: from biochemical kinetics to electronic circuits.

PubMed

Agliari, Elena; Barra, Adriano; Burioni, Raffaella; Di Biasio, Aldo; Uguzzoni, Guido

2013-12-10

In this work we aim to highlight a close analogy between cooperative behaviors in chemical kinetics and cybernetics; this is realized by using a common language for their description, that is mean-field statistical mechanics. First, we perform a one-to-one mapping between paradigmatic behaviors in chemical kinetics (i.e., non-cooperative, cooperative, ultra-sensitive, anti-cooperative) and in mean-field statistical mechanics (i.e., paramagnetic, high and low temperature ferromagnetic, anti-ferromagnetic). Interestingly, the statistical mechanics approach allows a unified, broad theory for all scenarios and, in particular, Michaelis-Menten, Hill and Adair equations are consistently recovered. This framework is then tested against experimental biological data with an overall excellent agreement. One step forward, we consistently read the whole mapping from a cybernetic perspective, highlighting deep structural analogies between the above-mentioned kinetics and fundamental bricks in electronics (i.e. operational amplifiers, flashes, flip-flops), so to build a clear bridge linking biochemical kinetics and cybernetics.

Collective behaviours: from biochemical kinetics to electronic circuits

PubMed Central

Agliari, Elena; Barra, Adriano; Burioni, Raffaella; Di Biasio, Aldo; Uguzzoni, Guido

2013-01-01

In this work we aim to highlight a close analogy between cooperative behaviors in chemical kinetics and cybernetics; this is realized by using a common language for their description, that is mean-field statistical mechanics. First, we perform a one-to-one mapping between paradigmatic behaviors in chemical kinetics (i.e., non-cooperative, cooperative, ultra-sensitive, anti-cooperative) and in mean-field statistical mechanics (i.e., paramagnetic, high and low temperature ferromagnetic, anti-ferromagnetic). Interestingly, the statistical mechanics approach allows a unified, broad theory for all scenarios and, in particular, Michaelis-Menten, Hill and Adair equations are consistently recovered. This framework is then tested against experimental biological data with an overall excellent agreement. One step forward, we consistently read the whole mapping from a cybernetic perspective, highlighting deep structural analogies between the above-mentioned kinetics and fundamental bricks in electronics (i.e. operational amplifiers, flashes, flip-flops), so to build a clear bridge linking biochemical kinetics and cybernetics. PMID:24322327

Collective behaviours: from biochemical kinetics to electronic circuits

NASA Astrophysics Data System (ADS)

Agliari, Elena; Barra, Adriano; Burioni, Raffaella; di Biasio, Aldo; Uguzzoni, Guido

2013-12-01

In this work we aim to highlight a close analogy between cooperative behaviors in chemical kinetics and cybernetics; this is realized by using a common language for their description, that is mean-field statistical mechanics. First, we perform a one-to-one mapping between paradigmatic behaviors in chemical kinetics (i.e., non-cooperative, cooperative, ultra-sensitive, anti-cooperative) and in mean-field statistical mechanics (i.e., paramagnetic, high and low temperature ferromagnetic, anti-ferromagnetic). Interestingly, the statistical mechanics approach allows a unified, broad theory for all scenarios and, in particular, Michaelis-Menten, Hill and Adair equations are consistently recovered. This framework is then tested against experimental biological data with an overall excellent agreement. One step forward, we consistently read the whole mapping from a cybernetic perspective, highlighting deep structural analogies between the above-mentioned kinetics and fundamental bricks in electronics (i.e. operational amplifiers, flashes, flip-flops), so to build a clear bridge linking biochemical kinetics and cybernetics.

Metastable Solution Thermodynamic Properties and Crystal Growth Kinetics

NASA Technical Reports Server (NTRS)

Kim, Soojin; Myerson, Allan S.

1996-01-01

The crystal growth rates of NH4H2PO4, KH2PO4, (NH4)2SO4, KAl(SO4)2 central dot 12H2O, NaCl, and glycine and the nucleation rates of KBr, KCl, NaBr central dot 2H2O, (NH4)2Cl, and (NH4)2SO4 were expressed in terms of the fundamental driving force of crystallization calculated from the activity of supersaturated solutions. The kinetic parameters were compared with those from the commonly used kinetic expression based on the concentration difference. From the viewpoint of thermodynamics, rate expressions based on the chemical potential difference provide accurate kinetic representation over a broad range of supersaturation. The rates estimated using the expression based on the concentration difference coincide with the true rates of crystallization only in the concentration range of low supersaturation and deviate from the true kinetics as the supersaturation increases.

A "Stationery" Kinetics Experiment.

ERIC Educational Resources Information Center

Hall, L.; Goberdhansingh, A.

1988-01-01

Describes a simple redox reaction that occurs between potassium permanganate and oxalic acid that can be used to prepare an interesting disappearing ink for demonstrating kinetics for introductory chemistry. Discusses laboratory procedures and factors that influence disappearance times. (CW)

Combustor kinetic energy efficiency analysis of the hypersonic research engine data

NASA Astrophysics Data System (ADS)

Hoose, K. V.

1993-11-01

A one-dimensional method for measuring combustor performance is needed to facilitate design and development scramjet engines. A one-dimensional kinetic energy efficiency method is used for measuring inlet and nozzle performance. The objective of this investigation was to assess the use of kinetic energy efficiency as an indicator for scramjet combustor performance. A combustor kinetic energy efficiency analysis was performed on the Hypersonic Research Engine (HRE) data. The HRE data was chosen for this analysis due to its thorough documentation and availability. The combustor, inlet, and nozzle kinetic energy efficiency values were utilized to determine an overall engine kinetic energy efficiency. Finally, a kinetic energy effectiveness method was developed to eliminate thermochemical losses from the combustion of fuel and air. All calculated values exhibit consistency over the flight speed range. Effects from fuel injection, altitude, angle of attack, subsonic-supersonic combustion transition, and inlet spike position are shown and discussed. The results of analyzing the HRE data indicate that the kinetic energy efficiency method is effective as a measure of scramjet combustor performance.

Influence of Prolonged Spaceflight on Heart Rate and Oxygen Uptake Kinetics

NASA Astrophysics Data System (ADS)

Hoffmann, U.; Moore, A.; Drescher, U.

2013-02-01

During prolonged spaceflight, physical training is used to minimize cardiovascular deconditioning. Measurement of the kinetics of cardiorespiratory parameters, in particular the kinetic analysis of heart rate, respiratory and muscular oxygen uptake, provides useful information with regard to the efficiency and regulation of the cardiorespiratory system. Practically, oxygen uptake kinetics can only be measured at the lung site (V’O2 resp). The dynamics of V’O2 resp, however, is not identical with the dynamics at the site of interest: skeletal muscle. Eight Astronauts were tested pre- and post-flight using pseudo random binary workload changes between 30 and 80 W. Their kinetic responses of heart rate, respiratory as well as muscular V’O2 kinetics were estimated by using time-series analysis. Statistical analysis revealed that the kinetic responses of respiratory as well as muscular V’O2 kinetics are slowed post-flight than pre-flight. Heart rate seems not to be influenced following flight. The influence of other factors (e. g. astronauts’ exercise training) may impact these parameters and is an area for future studies.

Spectral kinetic energy transfer in turbulent premixed reacting flows.

PubMed

Towery, C A Z; Poludnenko, A Y; Urzay, J; O'Brien, J; Ihme, M; Hamlington, P E

2016-05-01

Spectral kinetic energy transfer by advective processes in turbulent premixed reacting flows is examined using data from a direct numerical simulation of a statistically planar turbulent premixed flame. Two-dimensional turbulence kinetic-energy spectra conditioned on the planar-averaged reactant mass fraction are computed through the flame brush and variations in the spectra are connected to terms in the spectral kinetic energy transport equation. Conditional kinetic energy spectra show that turbulent small-scale motions are suppressed in the burnt combustion products, while the energy content of the mean flow increases. An analysis of spectral kinetic energy transfer further indicates that, contrary to the net down-scale transfer of energy found in the unburnt reactants, advective processes transfer energy from small to large scales in the flame brush close to the products. Triadic interactions calculated through the flame brush show that this net up-scale transfer of energy occurs primarily at spatial scales near the laminar flame thermal width. The present results thus indicate that advective processes in premixed reacting flows contribute to energy backscatter near the scale of the flame.

Kinetic energy budgets during the life cycle of intense convective activity

NASA Technical Reports Server (NTRS)

Fuelberg, H. E.; Scoggins, J. R.

1978-01-01

Synoptic-scale data at three- and six-hour intervals are employed to study the relationship between changing kinetic energy variables and the life cycles of two severe squall lines. The kinetic energy budgets indicate a high degree of kinetic energy generation, especially pronounced near the jet-stream level. Energy losses in the storm environment are due to the transfer of kinetic energy from grid to subgrid scales of motion; large-scale upward vertical motion carries aloft the kinetic energy generated by storm activity at lower levels. In general, the time of maximum storm intensity is also the time of maximum energy conversion and transport.

Kinetic chain abnormalities in the athletic shoulder.

PubMed

Sciascia, Aaron; Thigpen, Charles; Namdari, Surena; Baldwin, Keith

2012-03-01

Overhead activities require the shoulder to be exposed to and sustain repetitive loads. The segmental activation of the body's links, known as the kinetic chain, allows this to occur effectively. Proper muscle activation is achieved through generation of energy from the central segment or core, which then transfers the energy to the terminal links of the shoulder, elbow, and hand. The kinetic chain is best characterized by 3 components: optimized anatomy, reproducible efficient motor patterns, and the sequential generation of forces. However, tissue injury and anatomic deficits such as weakness and/or tightness in the leg, pelvic core, or scapular musculature can lead to overuse shoulder injuries. These injuries can be prevented and maladaptations can be detected with a thorough understanding of biomechanics of the kinetic chain as it relates to overhead activity.

Kinetic mechanism for modeling of electrochemical reactions.

PubMed

Cervenka, Petr; Hrdlička, Jiří; Přibyl, Michal; Snita, Dalimil

2012-04-01

We propose a kinetic mechanism of electrochemical interactions. We assume fast formation and recombination of electron donors D- and acceptors A+ on electrode surfaces. These mediators are continuously formed in the electrode matter by thermal fluctuations. The mediators D- and A+, chemically equivalent to the electrode metal, enter electrochemical interactions on the electrode surfaces. Electrochemical dynamics and current-voltage characteristics of a selected electrochemical system are studied. Our results are in good qualitative agreement with those given by the classical Butler-Volmer kinetics. The proposed model can be used to study fast electrochemical processes in microsystems and nanosystems that are often out of the thermal equilibrium. Moreover, the kinetic mechanism operates only with the surface concentrations of chemical reactants and local electric potentials, which facilitates the study of electrochemical systems with indefinable bulk.

Turbulence kinetic energy equation for dilute suspensions

NASA Technical Reports Server (NTRS)

Abou-Arab, T. W.; Roco, M. C.

1989-01-01

A multiphase turbulence closure model is presented which employs one transport equation, namely the turbulence kinetic energy equation. The proposed form of this equation is different from the earlier formulations in some aspects. The power spectrum of the carrier fluid is divided into two regions, which interact in different ways and at different rates with the suspended particles as a function of the particle-eddy size ratio and density ratio. The length scale is described algebraically. A mass/time averaging procedure for the momentum and kinetic energy equations is adopted. The resulting turbulence correlations are modeled under less retrictive assumptions comparative to previous work. The closures for the momentum and kinetic energy equations are given. Comparisons of the predictions with experimental results on liquid-solid jet and gas-solid pipe flow show satisfactory agreement.

Filamentary and hierarchical pictures - Kinetic energy criterion

NASA Technical Reports Server (NTRS)

Klypin, Anatoly A.; Melott, Adrian L.

1992-01-01

We present a new criterion for formation of second-generation filaments. The criterion called the kinetic energy ratio, KR, is based on comparison of peculiar velocities at different scales. We suggest that the clumpiness of the distribution in some cases might be less important than the 'coldness' or 'hotness' of the flow for formation of coherent structures. The kinetic energy ratio is analogous to the Mach number except for one essential difference. If at some scale KR is greater than 1, as estimated at the linear stage, then when fluctuations of this scale reach nonlinearity, the objects they produce must be anisotropic ('filamentary'). In the case of power-law initial spectra the kinetic ratio criterion suggests that the border line is the power-spectrum with the slope n = -1.

Multisubstrate biodegradation kinetics of naphthalene, phenanthrene, and pyrene mixtures

DOE Office of Scientific and Technical Information (OSTI.GOV)

Guha, S.; Peters, C.A.; Jaffe, P.R.

Biodegradation kinetics of naphthalene, phenanthrene and pyrene were studied in sole-substrate systems, and in binary and ternary mixtures to examine substrate interactions. The experiments were conducted in aerobic batch aqueous systems inoculated with a mixed culture that had been isolated from soils contaminated with polycyclic aromatic hydrocarbons (PAHs). Monod kinetic parameters and yield coefficients for the individual parameters and yield coefficients for the individual compounds were estimated from substrate depletion and CO{sub 2} evolution rate data in sole-substrate experiments. In all three binary mixture experiments, biodegradation kinetics were comparable to the sole-substrate kinetics. In the ternary mixture, biodegradation of naphthalenemore » was inhibited and the biodegradation rates of phenanthrene and pyrene were enhanced. A multisubstrate form of the Monod kinetic model was found to adequately predict substrate interactions in the binary and ternary mixtures using only the parameters derived from sole-substrate experiments. Numerical simulations of biomass growth kinetics explain the observed range of behaviors in PAH mixtures. In general, the biodegradation rates of the more degradable and abundant compounds are reduced due to competitive inhibition, but enhanced biodegradation of the more recalcitrant PAHs occurs due to simultaneous biomass growth on multiple substrates. In PAH-contaminated environments, substrate interactions may be very large due to additive effects from the large number of compounds present.« less

Kinetic energy and the equivalence principle

DOE Office of Scientific and Technical Information (OSTI.GOV)

Carlip, S.

1998-05-01

According to the general theory of relativity, kinetic energy contributes to gravitational mass. Surprisingly, the observational evidence for this prediction does not seem to be discussed in the literature. I reanalyze existing experimental data to test the equivalence principle for the kinetic energy of atomic electrons, and show that fairly strong limits on possible violations can be obtained. I discuss the relationship of this result to the occasional claim that {open_quotes}light falls with twice the acceleration of ordinary matter.{close_quotes} {copyright} {ital 1998 American Association of Physics Teachers.}

Model-Independent Bounds on Kinetic Mixing

DOE PAGES

Hook, Anson; Izaguirre, Eder; Wacker, Jay G.

2011-01-01

New Abelimore » an vector bosons can kinetically mix with the hypercharge gauge boson of the Standard Model. This letter computes the model-independent limits on vector bosons with masses from 1 GeV to 1 TeV. The limits arise from the numerous e + e − experiments that have been performed in this energy range and bound the kinetic mixing by ϵ ≲ 0.03 for most of the mass range studied, regardless of any additional interactions that the new vector boson may have.« less

Density controls the kinetic stability of ultrastable glasses

NASA Astrophysics Data System (ADS)

Fullerton, Christopher J.; Berthier, Ludovic

2017-08-01

We use a swap Monte Carlo algorithm to numerically prepare bulk glasses with kinetic stability comparable to that of glass films produced experimentally by physical vapor deposition. By melting these systems into the liquid state, we show that some of our glasses retain their amorphous structures longer than 105 times the equilibrium structural relaxation time. This “exceptional” kinetic stability cannot be achieved for bulk glasses produced by slow cooling. We perform simulations at both constant volume and constant pressure to demonstrate that the density mismatch between the ultrastable glass and the equilibrium liquid accounts for a major part of the observed kinetic stability.

Explicit integration with GPU acceleration for large kinetic networks

DOE Office of Scientific and Technical Information (OSTI.GOV)

Brock, Benjamin; Computer Science and Mathematics Division, Oak Ridge National Laboratory, Oak Ridge, TN 37830; Belt, Andrew

2015-12-01

We demonstrate the first implementation of recently-developed fast explicit kinetic integration algorithms on modern graphics processing unit (GPU) accelerators. Taking as a generic test case a Type Ia supernova explosion with an extremely stiff thermonuclear network having 150 isotopic species and 1604 reactions coupled to hydrodynamics using operator splitting, we demonstrate the capability to solve of order 100 realistic kinetic networks in parallel in the same time that standard implicit methods can solve a single such network on a CPU. This orders-of-magnitude decrease in computation time for solving systems of realistic kinetic networks implies that important coupled, multiphysics problems inmore » various scientific and technical fields that were intractable, or could be simulated only with highly schematic kinetic networks, are now computationally feasible.« less

Global Magnetosphere Modeling With Kinetic Treatment of Magnetic Reconnection

NASA Astrophysics Data System (ADS)

Toth, G.; Chen, Y.; Gombosi, T. I.; Cassak, P.; Markidis, S.; Peng, B.; Henderson, M. G.

2017-12-01

Global magnetosphere simulations with a kinetic treatment of magnetic reconnection are very challenging because of the large separation of global and kinetic scales. We have developed two algorithms that can overcome these difficulties: 1) the two-way coupling of the global magnetohydrodynamic code with an embedded particle-in-cell model (MHD-EPIC) and 2) the artificial increase of the ion and electron kinetic scales. Both of these techniques improve the efficiency of the simulations by many orders of magnitude. We will describe the techniques and show that they provide correct and meaningful results. Using the coupled model and the increased kinetic scales, we will present global magnetosphere simulations with the PIC domains covering the dayside and/or tail reconnection sites. The simulation results will be compared to and validated with MMS observations.

Kinetic Behaviour of Failure Waves in a Filled Glass

NASA Astrophysics Data System (ADS)

Resnyansky, A. D.; Bourne, N. K.

2007-12-01

Experimental stress and velocity profiles in a lead filled glass demonstrate a pronounced kinetic behaviour for failure waves in the material during shock loading. The present work summarises the experimental proofs of the kinetic behaviour obtained with stress and velocity gauges. The work describes a model for this behaviour employing a kinetic description used earlier for fracture waves in Pyrex glass. This model is part of a family of two-phase, strain-rate sensitive models describing the behaviour of damaged brittle materials. The modelling results describe well both the stress decay of the failure wave precursor in the stress profiles and main pulse attenuation in the velocity profiles. The influences of the kinetic mechanisms and wave interactions within the test assembly on the reduction of this behaviour are discussed.

Automated Transition State Theory Calculations for High-Throughput Kinetics.

PubMed

Bhoorasingh, Pierre L; Slakman, Belinda L; Seyedzadeh Khanshan, Fariba; Cain, Jason Y; West, Richard H

2017-09-21

A scarcity of known chemical kinetic parameters leads to the use of many reaction rate estimates, which are not always sufficiently accurate, in the construction of detailed kinetic models. To reduce the reliance on these estimates and improve the accuracy of predictive kinetic models, we have developed a high-throughput, fully automated, reaction rate calculation method, AutoTST. The algorithm integrates automated saddle-point geometry search methods and a canonical transition state theory kinetics calculator. The automatically calculated reaction rates compare favorably to existing estimated rates. Comparison against high level theoretical calculations show the new automated method performs better than rate estimates when the estimate is made by a poor analogy. The method will improve by accounting for internal rotor contributions and by improving methods to determine molecular symmetry.

Explicit integration with GPU acceleration for large kinetic networks

DOE PAGES

Brock, Benjamin; Belt, Andrew; Billings, Jay Jay; ...

2015-09-15

In this study, we demonstrate the first implementation of recently-developed fast explicit kinetic integration algorithms on modern graphics processing unit (GPU) accelerators. Taking as a generic test case a Type Ia supernova explosion with an extremely stiff thermonuclear network having 150 isotopic species and 1604 reactions coupled to hydrodynamics using operator splitting, we demonstrate the capability to solve of order 100 realistic kinetic networks in parallel in the same time that standard implicit methods can solve a single such network on a CPU. In addition, this orders-of-magnitude decrease in computation time for solving systems of realistic kinetic networks implies thatmore » important coupled, multiphysics problems in various scientific and technical fields that were intractable, or could be simulated only with highly schematic kinetic networks, are now computationally feasible.« less

Energy transfer, pressure tensor, and heating of kinetic plasma

NASA Astrophysics Data System (ADS)

Yang, Yan; Matthaeus, William H.; Parashar, Tulasi N.; Haggerty, Colby C.; Roytershteyn, Vadim; Daughton, William; Wan, Minping; Shi, Yipeng; Chen, Shiyi

2017-07-01

Kinetic plasma turbulence cascade spans multiple scales ranging from macroscopic fluid flow to sub-electron scales. Mechanisms that dissipate large scale energy, terminate the inertial range cascade, and convert kinetic energy into heat are hotly debated. Here, we revisit these puzzles using fully kinetic simulation. By performing scale-dependent spatial filtering on the Vlasov equation, we extract information at prescribed scales and introduce several energy transfer functions. This approach allows highly inhomogeneous energy cascade to be quantified as it proceeds down to kinetic scales. The pressure work, - ( P . ∇ ) . u , can trigger a channel of the energy conversion between fluid flow and random motions, which contains a collision-free generalization of the viscous dissipation in collisional fluid. Both the energy transfer and the pressure work are strongly correlated with velocity gradients.

Kinetic Modeling of a Heterogeneous Fenton Oxidative Treatment of Petroleum Refining Wastewater

PubMed Central

Basheer Hasan, Diya'uddeen; Abdul Raman, Abdul Aziz; Wan Daud, Wan Mohd Ashri

2014-01-01

The mineralisation kinetics of petroleum refinery effluent (PRE) by Fenton oxidation were evaluated. Within the ambit of the experimental data generated, first-order kinetic model (FKM), generalised lumped kinetic model (GLKM), and generalized kinetic model (GKM) were tested. The obtained apparent kinetic rate constants for the initial oxidation step (k 2′), their final oxidation step (k 1′), and the direct conversion to endproducts step (k 3′) were 10.12, 3.78, and 0.24 min−1 for GKM; 0.98, 0.98, and nil min−1 for GLKM; and nil, nil, and >0.005 min−1 for FKM. The findings showed that GKM is superior in estimating the mineralization kinetics. PMID:24592152

Kinetics and Catalysis Demonstrations.

ERIC Educational Resources Information Center

Falconer, John L.; Britten, Jerald A.

1984-01-01

Eleven videotaped kinetics and catalysis demonstrations are described. Demonstrations include the clock reaction, oscillating reaction, hydrogen oxidation in air, hydrogen-oxygen explosion, acid-base properties of solids, high- and low-temperature zeolite reactivity, copper catalysis of ammonia oxidation and sodium peroxide decomposition, ammonia…

Fully kinetic simulations of dense plasma focus Z-pinch devices.

PubMed

Schmidt, A; Tang, V; Welch, D

2012-11-16

Dense plasma focus Z-pinch devices are sources of copious high energy electrons and ions, x rays, and neutrons. The mechanisms through which these physically simple devices generate such high-energy beams in a relatively short distance are not fully understood. We now have, for the first time, demonstrated a capability to model these plasmas fully kinetically, allowing us to simulate the pinch process at the particle scale. We present here the results of the initial kinetic simulations, which reproduce experimental neutron yields (~10(7)) and high-energy (MeV) beams for the first time. We compare our fluid, hybrid (kinetic ions and fluid electrons), and fully kinetic simulations. Fluid simulations predict no neutrons and do not allow for nonthermal ions, while hybrid simulations underpredict neutron yield by ~100x and exhibit an ion tail that does not exceed 200 keV. Only fully kinetic simulations predict MeV-energy ions and experimental neutron yields. A frequency analysis in a fully kinetic simulation shows plasma fluctuations near the lower hybrid frequency, possibly implicating lower hybrid drift instability as a contributor to anomalous resistivity in the plasma.

Oxidation Kinetics of Ferritic Alloys in High-Temperature Steam Environments

DOE Office of Scientific and Technical Information (OSTI.GOV)

Parker, Stephen S.; White, Josh; Hosemann, Peter

High-temperature isothermal steam oxidation kinetic parameters of several ferritic alloys were determined by thermogravimetric analysis. We measured the oxidation kinetic constant (k) as a function of temperature from 900°C to 1200°C. The results show a marked increase in oxidation resistance compared to reference Zircaloy-2, with kinetic constants 3–5 orders of magnitude lower across the experimental temperature range. Our results of this investigation supplement previous findings on the properties of ferritic alloys for use as candidate cladding materials and extend kinetic parameter measurements to high-temperature steam environments suitable for assessing accident tolerance for light water reactor applications.

Oxidation Kinetics of Ferritic Alloys in High-Temperature Steam Environments

DOE PAGES

Parker, Stephen S.; White, Josh; Hosemann, Peter; ...

2017-11-03

High-temperature isothermal steam oxidation kinetic parameters of several ferritic alloys were determined by thermogravimetric analysis. We measured the oxidation kinetic constant (k) as a function of temperature from 900°C to 1200°C. The results show a marked increase in oxidation resistance compared to reference Zircaloy-2, with kinetic constants 3–5 orders of magnitude lower across the experimental temperature range. Our results of this investigation supplement previous findings on the properties of ferritic alloys for use as candidate cladding materials and extend kinetic parameter measurements to high-temperature steam environments suitable for assessing accident tolerance for light water reactor applications.

Oxidation Kinetics of Ferritic Alloys in High-Temperature Steam Environments

NASA Astrophysics Data System (ADS)

Parker, Stephen S.; White, Josh; Hosemann, Peter; Nelson, Andrew

2018-02-01

High-temperature isothermal steam oxidation kinetic parameters of several ferritic alloys were determined by thermogravimetric analysis. The oxidation kinetic constant ( k) was measured as a function of temperature from 900°C to 1200°C. The results show a marked increase in oxidation resistance compared to reference Zircaloy-2, with kinetic constants 3-5 orders of magnitude lower across the experimental temperature range. The results of this investigation supplement previous findings on the properties of ferritic alloys for use as candidate cladding materials and extend kinetic parameter measurements to high-temperature steam environments suitable for assessing accident tolerance for light water reactor applications.

A kinetic model for chemical neurotransmission

NASA Astrophysics Data System (ADS)

Ramirez-Santiago, Guillermo; Martinez-Valencia, Alejandro; Fernandez de Miguel, Francisco

Recent experimental observations in presynaptic terminals at the neuromuscular junction indicate that there are stereotyped patterns of cooperativeness in the fusion of adjacent vesicles. That is, a vesicle in hemifusion process appears on the side of a fused vesicle and which is followed by another vesicle in a priming state while the next one is in a docking state. In this talk we present a kinetic model for this morphological pattern in which each vesicle state previous to the exocytosis is represented by a kinetic state. This chain states kinetic model can be analyzed by means of a Master equation whose solution is simulated with the stochastic Gillespie algorithm. With this approach we have reproduced the responses to the basal release in the absence of stimulation evoked by the electrical activity and the phenomena of facilitation and depression of neuromuscular synapses. This model offers new perspectives to understand the underlying phenomena in chemical neurotransmission based on molecular interactions that result in the cooperativity between vesicles during neurotransmitter release. DGAPA Grants IN118410 and IN200914 and Conacyt Grant 130031.

Development and Application of a High Throughput Protein Unfolding Kinetic Assay

PubMed Central

Wang, Qiang; Waterhouse, Nicklas; Feyijinmi, Olusegun; Dominguez, Matthew J.; Martinez, Lisa M.; Sharp, Zoey; Service, Rachel; Bothe, Jameson R.; Stollar, Elliott J.

2016-01-01

The kinetics of folding and unfolding underlie protein stability and quantification of these rates provides important insights into the folding process. Here, we present a simple high throughput protein unfolding kinetic assay using a plate reader that is applicable to the studies of the majority of 2-state folding proteins. We validate the assay by measuring kinetic unfolding data for the SH3 (Src Homology 3) domain from Actin Binding Protein 1 (AbpSH3) and its stabilized mutants. The results of our approach are in excellent agreement with published values. We further combine our kinetic assay with a plate reader equilibrium assay, to obtain indirect estimates of folding rates and use these approaches to characterize an AbpSH3-peptide hybrid. Our high throughput protein unfolding kinetic assays allow accurate screening of libraries of mutants by providing both kinetic and equilibrium measurements and provide a means for in-depth ϕ-value analyses. PMID:26745729

The kinetics of competitive antagonists on guinea-pig ileum.

PubMed Central

Roberts, F; Stephenson, R P

1976-01-01

1 The kinetics of action of some competitive muscarinic and histamine antagonists were examined on guinea-pig isolated ileum and their behaviour compared with the predictions of the interaction-limited model described by Paton (1961). 2 The kinetics of antagonism were not consistent with the predictions of this model: (1) The apparent dissociation rate constant calculated from the decrease in occupancy on washout was not independent of the concentration of antagonist. (2) The dissociation rate constant of a 'slow' antagonist calculated from the change in occupancy when a 'fast' antagonist was superimposed varied with the concentration of fast antagonist. (3) If the concentration of slow antagonist was increased when the fast antagonist was superimposed so that the equilibrium occupancy of the 'slow' was the same as before, a transitional phase was observed. 3 The kinetics of antagonism were observed in longitudinal muscle strips and intact pieces of ileum, bathed in Tyrode or Krebs solution, and with isometric and isotonic recording. No evidence was found that the discrepancies between the interaction-limited model and the observed kinetics could be accounted for by the experimental method used. 4 It is therefore concluded that either access is rate-limiting in these circumstances or, if interaction is rate-limiting, some alternative interaction-limited model is required to describe the kinetics of antagonism. In either case it would seem unwise at this time to calculate antagonist-receptor rate constants from the observed kinetics of antagonism. PMID:974378

Benchmarking kinetic calculations of resistive wall mode stability

NASA Astrophysics Data System (ADS)

Berkery, J. W.; Liu, Y. Q.; Wang, Z. R.; Sabbagh, S. A.; Logan, N. C.; Park, J.-K.; Manickam, J.; Betti, R.

2014-05-01

Validating the calculations of kinetic resistive wall mode (RWM) stability is important for confidently predicting RWM stable operating regions in ITER and other high performance tokamaks for disruption avoidance. Benchmarking the calculations of the Magnetohydrodynamic Resistive Spectrum—Kinetic (MARS-K) [Y. Liu et al., Phys. Plasmas 15, 112503 (2008)], Modification to Ideal Stability by Kinetic effects (MISK) [B. Hu et al., Phys. Plasmas 12, 057301 (2005)], and Perturbed Equilibrium Nonambipolar Transport PENT) [N. Logan et al., Phys. Plasmas 20, 122507 (2013)] codes for two Solov'ev analytical equilibria and a projected ITER equilibrium has demonstrated good agreement between the codes. The important particle frequencies, the frequency resonance energy integral in which they are used, the marginally stable eigenfunctions, perturbed Lagrangians, and fluid growth rates are all generally consistent between the codes. The most important kinetic effect at low rotation is the resonance between the mode rotation and the trapped thermal particle's precession drift, and MARS-K, MISK, and PENT show good agreement in this term. The different ways the rational surface contribution was treated historically in the codes is identified as a source of disagreement in the bounce and transit resonance terms at higher plasma rotation. Calculations from all of the codes support the present understanding that RWM stability can be increased by kinetic effects at low rotation through precession drift resonance and at high rotation by bounce and transit resonances, while intermediate rotation can remain susceptible to instability. The applicability of benchmarked kinetic stability calculations to experimental results is demonstrated by the prediction of MISK calculations of near marginal growth rates for experimental marginal stability points from the National Spherical Torus Experiment (NSTX) [M. Ono et al., Nucl. Fusion 40, 557 (2000)].

Direct Estimation of Kinetic Parametric Images for Dynamic PET

PubMed Central

Wang, Guobao; Qi, Jinyi

2013-01-01

Dynamic positron emission tomography (PET) can monitor spatiotemporal distribution of radiotracer in vivo. The spatiotemporal information can be used to estimate parametric images of radiotracer kinetics that are of physiological and biochemical interests. Direct estimation of parametric images from raw projection data allows accurate noise modeling and has been shown to offer better image quality than conventional indirect methods, which reconstruct a sequence of PET images first and then perform tracer kinetic modeling pixel-by-pixel. Direct reconstruction of parametric images has gained increasing interests with the advances in computing hardware. Many direct reconstruction algorithms have been developed for different kinetic models. In this paper we review the recent progress in the development of direct reconstruction algorithms for parametric image estimation. Algorithms for linear and nonlinear kinetic models are described and their properties are discussed. PMID:24396500

Effect of cellulose nanocrystals on crystallization kinetics of polycaprolactone

NASA Astrophysics Data System (ADS)

Migler, Kalman; Roy, Debjani; Kotula, Anthony; Natarajan, Bharath; Gilman, Jeffrey; Fox, Douglas

The development of biocompatible polymer composites that enhance mechanical properties while maintaining thermoplastic processability is a longstanding goal in sustainable materials. Here we compatibilize a crystallizable polymer and a nano-fiber via surface modification and study the properties and crystallization kinetics of the resulting composite. First we demonstrate that polycaprolactone (PCL) and cellulose nanocrystals (CNCs) can be well-compatibilized by replacing the Na+ of sulfated cellulose nanocrystals (Na-CNCs) with tertiary butyl ammonium cations and then melt mixing via twin-screw extrusion. Transmission electron microscope and high temperature melt rheology show that the modified CNCs were dispersed in the polymer matrix. We find the crystallization kinetics are substantially affected by the CNC as indicated by the simultaneous measures of modulus and conformational states; higher loadings of CNCs accelerated the kinetics. We further correlate the crystallization kinetics, mechanical properties and stability.

Kinetic modeling of kraft delignification of Eucalyptus globulus

DOE Office of Scientific and Technical Information (OSTI.GOV)

Santos, A.; Rodriguez, F.; Gilarranz, M.A.

1997-10-01

A kinetic model for the kraft pulping delignification of Eucalyptus globulus is proposed. This model is discriminated among some kinetic expressions often used in the literature, and the kinetic parameters are determined by fitting of experimental results. A total of 25 isothermal experiments at liquor-to-wood ratios of 50 and 5 L/kg have been carried out. Initial, bulk, and residual delignification stages have been observed during the lignin removal, the transitions being, referring to the lignin initial content, about 82 and 3%. Carbohydrate removal and effective alkali-metal and hydrosulfide consumption have been related with the lignin removal by means of effectivemore » stoichiometric coefficients for each stage, coefficients also being calculated by fitting of the experimental data. The kinetic model chosen has been used to simulate typical kraft pulping experiments carried out at nonisothermal conditions, using a temperature ramp. The model yields simulated values close to those obtained experimentally for the wood studied and also ably reproduces the trends of the literature data.« less

Determining Kinetic Parameters for Isothermal Crystallization of Glasses

NASA Technical Reports Server (NTRS)

Ray, C. S.; Zhang, T.; Reis, S. T.; Brow, R. K.

2006-01-01

Non-isothermal crystallization techniques are frequently used to determine the kinetic parameters for crystallization in glasses. These techniques are experimentally simple and quick compared to the isothermal techniques. However, the analytical models used for non-isothermal data analysis, originally developed for describing isothermal transformation kinetics, are fundamentally flawed. The present paper describes a technique for determining the kinetic parameters for isothermal crystallization in glasses, which eliminates most of the common problems that generally make the studies of isothermal crystallization laborious and time consuming. In this technique, the volume fraction of glass that is crystallized as a function of time during an isothermal hold was determined using differential thermal analysis (DTA). The crystallization parameters for the lithium-disilicate (Li2O.2SiO2) model glass were first determined and compared to the same parameters determined by other techniques to establish the accuracy and usefulness of the present technique. This technique was then used to describe the crystallization kinetics of a complex Ca-Sr-Zn-silicate glass developed for sealing solid oxide fuel cells.

Kinetics of exciplex formation/dissipation in reaction following Weller Scheme II

NASA Astrophysics Data System (ADS)

Fedorenko, S. G.; Burshtein, A. I.

2014-09-01

Creation of exciplexes from the charged products of photoionization is considered by means of Integral Encounter Theory. The general kinetic equations of such a reaction following the Weller scheme II are developed. The special attention is given to the particular case of irreversible remote ionization of primary excited electron donor. Kinetics of exciplex formation is considered at fast biexponential geminate transformation of exciplexes in cage that gives way to subsequent bulk reaction of equilibrated reaction products controlled by power law recombination of ions. It is shown that the initial geminate stage of exciplex kinetics is observed only in diffusion controlled regime of the reaction and disappears with increasing mobility of ions in passing to kinetic regime. The quantum yield of exciplexes is studied along with their kinetics.

Kinetics of exciplex formation/dissipation in reaction following Weller Scheme II.

PubMed

Fedorenko, S G; Burshtein, A I

2014-09-21

Creation of exciplexes from the charged products of photoionization is considered by means of Integral Encounter Theory. The general kinetic equations of such a reaction following the Weller scheme II are developed. The special attention is given to the particular case of irreversible remote ionization of primary excited electron donor. Kinetics of exciplex formation is considered at fast biexponential geminate transformation of exciplexes in cage that gives way to subsequent bulk reaction of equilibrated reaction products controlled by power law recombination of ions. It is shown that the initial geminate stage of exciplex kinetics is observed only in diffusion controlled regime of the reaction and disappears with increasing mobility of ions in passing to kinetic regime. The quantum yield of exciplexes is studied along with their kinetics.

Kinetics of shear-induced gel deswelling/solvent release.

PubMed

Zeo, Undina; Tarabukina, Elena; Budtova, Tatiana

2005-11-02

The kinetics of shear-induced deswelling of gel particles based on synthetic (sodium polyacrylate) and natural (alginate) polymers was studied by rheo-optical technique. A swollen spherical gel particle of 100+/-50 microm diameter was placed in silicone oil and the evolution of the gel size as a function of time and shear rate was monitored. Different aqueous polymer solutions were used as synthetic gel solvent: polyvinylpyrrolidone, hydroxypropyl cellulose and glucose-based polymer. The interfacial tension (gel solvent)/(silicone oil), gel degree of swelling, solvent quality and viscosity are the main parameters influencing the kinetics of shear-induced gel deswelling. The kinetics of gel volume loss was approximated by a modified Weibull equation.

Frequency adaptive metadynamics for the calculation of rare-event kinetics

NASA Astrophysics Data System (ADS)

Wang, Yong; Valsson, Omar; Tiwary, Pratyush; Parrinello, Michele; Lindorff-Larsen, Kresten

2018-08-01

The ability to predict accurate thermodynamic and kinetic properties in biomolecular systems is of both scientific and practical utility. While both remain very difficult, predictions of kinetics are particularly difficult because rates, in contrast to free energies, depend on the route taken. For this reason, specific enhanced sampling methods are needed to calculate long-time scale kinetics. It has recently been demonstrated that it is possible to recover kinetics through the so-called "infrequent metadynamics" simulations, where the simulations are biased in a way that minimally corrupts the dynamics of moving between metastable states. This method, however, requires the bias to be added slowly, thus hampering applications to processes with only modest separations of time scales. Here we present a frequency-adaptive strategy which bridges normal and infrequent metadynamics. We show that this strategy can improve the precision and accuracy of rate calculations at fixed computational cost and should be able to extend rate calculations for much slower kinetic processes.

The kinetics of polyurethane structural foam formation: Foaming and polymerization

DOE Office of Scientific and Technical Information (OSTI.GOV)

Rao, Rekha R.; Mondy, Lisa A.; Long, Kevin N.

We are developing kinetic models to understand the manufacturing of polymeric foams, which evolve from low viscosity Newtonian liquids, to bubbly liquids, finally producing solid foam. Closed-form kinetics are formulated and parameterized for PMDI-10, a fast curing polyurethane, including polymerization and foaming. PMDI- 10 is chemically blown, where water and isocyanate react to form carbon dioxide. The isocyanate reacts with polyol in a competing reaction, producing polymer. Our approach is unique, though it builds on our previous work and the polymerization literature. This kinetic model follows a simplified mathematical formalism that decouples foaming and curing, including an evolving glass transitionmore » temperature to represent vitrification. This approach is based on IR, DSC, and volume evolution data, where we observed that the isocyanate is always in excess and does not affect the kinetics. Finally, the kinetics are suitable for implementation into a computational fluid dynamics framework, which will be explored in subsequent papers.« less

Kinetic modeling of antimony(III) oxidation and sorption in soils.

PubMed

Cai, Yongbing; Mi, Yuting; Zhang, Hua

2016-10-05

Kinetic batch and saturated column experiments were performed to study the oxidation, adsorption and transport of Sb(III) in two soils with contrasting properties. Kinetic and column experiment results clearly demonstrated the extensive oxidation of Sb(III) in soils, and this can in return influence the adsorption and transport of Sb. Both sorption capacity and kinetic oxidation rate were much higher in calcareous Huanjiang soil than in acid red Yingtan soil. The results indicate that soil serve as a catalyst in promoting oxidation of Sb(III) even under anaerobic conditions. A PHREEQC model with kinetic formulations was developed to simulate the oxidation, sorption and transport of Sb(III) in soils. The model successfully described Sb(III) oxidation and sorption data in kinetic batch experiment. It was less successful in simulating the reactive transport of Sb(III) in soil columns. Additional processes such as colloid facilitated transport need to be quantified and considered in the model. Copyright © 2016 Elsevier B.V. All rights reserved.

The kinetics of polyurethane structural foam formation: Foaming and polymerization

DOE PAGES

Rao, Rekha R.; Mondy, Lisa A.; Long, Kevin N.; ...

2017-02-15

We are developing kinetic models to understand the manufacturing of polymeric foams, which evolve from low viscosity Newtonian liquids, to bubbly liquids, finally producing solid foam. Closed-form kinetics are formulated and parameterized for PMDI-10, a fast curing polyurethane, including polymerization and foaming. PMDI- 10 is chemically blown, where water and isocyanate react to form carbon dioxide. The isocyanate reacts with polyol in a competing reaction, producing polymer. Our approach is unique, though it builds on our previous work and the polymerization literature. This kinetic model follows a simplified mathematical formalism that decouples foaming and curing, including an evolving glass transitionmore » temperature to represent vitrification. This approach is based on IR, DSC, and volume evolution data, where we observed that the isocyanate is always in excess and does not affect the kinetics. Finally, the kinetics are suitable for implementation into a computational fluid dynamics framework, which will be explored in subsequent papers.« less

A conservative scheme of drift kinetic electrons for gyrokinetic simulation of kinetic-MHD processes in toroidal plasmas

NASA Astrophysics Data System (ADS)

Bao, J.; Liu, D.; Lin, Z.

2017-10-01

A conservative scheme of drift kinetic electrons for gyrokinetic simulations of kinetic-magnetohydrodynamic processes in toroidal plasmas has been formulated and verified. Both vector potential and electron perturbed distribution function are decomposed into adiabatic part with analytic solution and non-adiabatic part solved numerically. The adiabatic parallel electric field is solved directly from the electron adiabatic response, resulting in a high degree of accuracy. The consistency between electrostatic potential and parallel vector potential is enforced by using the electron continuity equation. Since particles are only used to calculate the non-adiabatic response, which is used to calculate the non-adiabatic vector potential through Ohm's law, the conservative scheme minimizes the electron particle noise and mitigates the cancellation problem. Linear dispersion relations of the kinetic Alfvén wave and the collisionless tearing mode in cylindrical geometry have been verified in gyrokinetic toroidal code simulations, which show that the perpendicular grid size can be larger than the electron collisionless skin depth when the mode wavelength is longer than the electron skin depth.

Kinetic operational models of agonism for G-protein-coupled receptors.

PubMed

Hoare, Samuel R J; Pierre, Nicolas; Moya, Arturo Gonzalez; Larson, Brad

2018-06-07

The application of kinetics to research and therapeutic development of G-protein-coupled receptors has become increasingly valuable. Pharmacological models provide the foundation of pharmacology, providing concepts and measurable parameters such as efficacy and potency that have underlain decades of successful drug discovery. Currently there are few pharmacological models that incorporate kinetic activity in such a way as to yield experimentally-accessible drug parameters. In this study, a kinetic model of pharmacological response was developed that provides a kinetic descriptor of efficacy (the transduction rate constant, k τ ) and allows measurement of receptor-ligand binding kinetics from functional data. The model assumes: (1) receptor interacts with a precursor of the response ("Transduction potential") and converts it to the response. (2) The response can decay. Familiar response vs time plots emerge, depending on whether transduction potential is depleted and/or response decays. These are the straight line, the "association" exponential curve, and the rise-and-fall curve. Convenient, familiar methods are described for measuring the model parameters and files are provided for the curve-fitting program Prism (GraphPad Software) that can be used as a guide. The efficacy parameter k τ is straightforward to measure and accounts for receptor reserve; all that is required is measurement of response over time at a maximally-stimulating concentration of agonist. The modular nature of the model framework allows it to be extended. Here this is done to incorporate antagonist-receptor binding kinetics and slow agonist-receptor equilibration. In principle, the modular framework can incorporate other cellular processes, such as receptor desensitization. The kinetic response model described here can be applied to measure kinetic pharmacological parameters than can be used to advance the understanding of GPCR pharmacology and optimize new and improved therapeutics

Receptor binding kinetics equations: Derivation using the Laplace transform method.

PubMed

Hoare, Sam R J

Measuring unlabeled ligand receptor binding kinetics is valuable in optimizing and understanding drug action. Unfortunately, deriving equations for estimating kinetic parameters is challenging because it involves calculus; integration can be a frustrating barrier to the pharmacologist seeking to measure simple rate parameters. Here, a well-known tool for simplifying the derivation, the Laplace transform, is applied to models of receptor-ligand interaction. The method transforms differential equations to a form in which simple algebra can be applied to solve for the variable of interest, for example the concentration of ligand-bound receptor. The goal is to provide instruction using familiar examples, to enable investigators familiar with handling equilibrium binding equations to derive kinetic equations for receptor-ligand interaction. First, the Laplace transform is used to derive the equations for association and dissociation of labeled ligand binding. Next, its use for unlabeled ligand kinetic equations is exemplified by a full derivation of the kinetics of competitive binding equation. Finally, new unlabeled ligand equations are derived using the Laplace transform. These equations incorporate a pre-incubation step with unlabeled or labeled ligand. Four equations for measuring unlabeled ligand kinetics were compared and the two new equations verified by comparison with numerical solution. Importantly, the equations have not been verified with experimental data because no such experiments are evident in the literature. Equations were formatted for use in the curve-fitting program GraphPad Prism 6.0 and fitted to simulated data. This description of the Laplace transform method will enable pharmacologists to derive kinetic equations for their model or experimental paradigm under study. Application of the transform will expand the set of equations available for the pharmacologist to measure unlabeled ligand binding kinetics, and for other time

Solar extinction radiometry

NASA Technical Reports Server (NTRS)

Goldman, A.

1981-01-01

Work on the spectral line parameters of hydroxyl radical band was completed. The UV-visible data obtained during 1977 balloon flights were used for zone quantification. The region between from 3100 A to 3500 A appears to be the best region to use for determining ozone columns with the three wavelength method. Ozone volume mixing ratios determined for the 1977 data were compared with standard middle latitude ozone profiles. Numerous high and low Sun scans were obtained during ascent and from float altitude (1981 balloon flight) at 0.003 A resolution in the 3068 A to 3089 A region. The spectra are being studied for OH identification and quantification.

Infrared Photothermal Radiometry.

DTIC Science & Technology

1984-04-10

changes whenever the transmitted thermal wave crosses a void. This provides a means of nondestructive subsurface imaging of defects, and Busse found that...15 In the flash excitation, the excitation beam is modulated by a broad spectrum of Fourier modulation frequencies. In all cases of subsurface imaging , the...technique of Nordal and Kanstad 2 1t 23 is not only good for spectroscopic detection, but also for subsurface imaging applications as well. 2.4 Pulsed

The Kinetic Energy of a Rotating Figure Skater.

ERIC Educational Resources Information Center

Chen, Wei R.; Troelstra, Arne A.

1998-01-01

When a rotating figure skater's fully extended arms are pulled back toward the torso, the angular velocity is noticeably increased and the kinetic energy of the skater can also be shown to increase. Discusses the change of the kinetic energy during such a process, and the work necessary for such an increase is derived using a dynamic equilibrium…

Kinetics of enzymatic trans-esterification of glycerides for biodiesel production.

PubMed

Calabrò, Vincenza; Ricca, Emanuele; De Paola, Maria Gabriela; Curcio, Stefano; Iorio, Gabriele

2010-08-01

In this paper, the reaction of enzymatic trans-esterification of glycerides with ethanol in a reaction medium containing hexane at a temperature of 37 degrees C has been studied. The enzyme was Lipase from Mucor miehei, immobilized on ionic exchange resin, aimed at achieving high catalytic specific surface and recovering, regenerating and reusing the biocatalyst. A kinetic analysis has been carried out to identify the reaction path; the rate equation and kinetic parameters have been also calculated. The kinetic model has been validated by comparison between predicted and experimental results. Mass transport resistances estimation was undertaken in order to verify that the kinetics found was intrinsic. Model potentialities in terms of reactors design and optimization are also shown.

Studies of concentration and temperature dependences of precipitation kinetics in iron-copper alloys using kinetic Monte Carlo and stochastic statistical simulations

DOE Office of Scientific and Technical Information (OSTI.GOV)

Khromov, K. Yu.; Vaks, V. G., E-mail: vaks@mbslab.kiae.ru; Zhuravlev, I. A.

2013-02-15

The previously developed ab initio model and the kinetic Monte Carlo method (KMCM) are used to simulate precipitation in a number of iron-copper alloys with different copper concentrations x and temperatures T. The same simulations are also made using an improved version of the previously suggested stochastic statistical method (SSM). The results obtained enable us to make a number of general conclusions about the dependences of the decomposition kinetics in Fe-Cu alloys on x and T. We also show that the SSM usually describes the precipitation kinetics in good agreement with the KMCM, and using the SSM in conjunction withmore » the KMCM allows extending the KMC simulations to the longer evolution times. The results of simulations seem to agree with available experimental data for Fe-Cu alloys within statistical errors of simulations and the scatter of experimental results. Comparison of simulation results with experiments for some multicomponent Fe-Cu-based alloys allows making certain conclusions about the influence of alloying elements in these alloys on the precipitation kinetics at different stages of evolution.« less

Diffusion Influenced Adsorption Kinetics.

PubMed

Miura, Toshiaki; Seki, Kazuhiko

2015-08-27

When the kinetics of adsorption is influenced by the diffusive flow of solutes, the solute concentration at the surface is influenced by the surface coverage of solutes, which is given by the Langmuir-Hinshelwood adsorption equation. The diffusion equation with the boundary condition given by the Langmuir-Hinshelwood adsorption equation leads to the nonlinear integro-differential equation for the surface coverage. In this paper, we solved the nonlinear integro-differential equation using the Grünwald-Letnikov formula developed to solve fractional kinetics. Guided by the numerical results, analytical expressions for the upper and lower bounds of the exact numerical results were obtained. The upper and lower bounds were close to the exact numerical results in the diffusion- and reaction-controlled limits, respectively. We examined the validity of the two simple analytical expressions obtained in the diffusion-controlled limit. The results were generalized to include the effect of dispersive diffusion. We also investigated the effect of molecular rearrangement of anisotropic molecules on surface coverage.

Laminated helmet materials characterization by terahertz kinetics spectroscopy

NASA Astrophysics Data System (ADS)

Rahman, Anis; Rahman, Aunik K.

2015-05-01

High speed acquisition of reflected terahertz energy constitutes a kinetics spectrum that is an effective tool for layered materials' deformation characterization under ballistic impact. Here we describe utilizing the kinetics spectrum for quantifying a deformation event due to impact in material used for Soldier's helmet. The same technique may be utilized for real-time assessment of trauma by measuring the helmet wore by athletes. The deformation of a laminated material (e.g., a helmet) is dependent on the nature of impact and projectile; thus can uniquely characterize the impact condition leading to a diagnostic procedure based on the energy received by an athlete during an impact. We outline the calibration process for a given material under ballistic impact and then utilize the calibration for extracting physical parameters from the measured kinetics spectrum. Measured kinetics spectra are used to outline the method and rationale for extending the concept to a diagnosis tool. In particular, captured kinetics spectra from multilayered plates subjected to ballistic hit under experimental conditions by high speed digital acquisition system. An algorithm was devised to extract deformation and deformation velocity from which the energy received on the skull was estimated via laws of nonrelativistic motion. This energy is assumed to be related to actual injury conditions, thus forming a basis for determining whether the hit would cause concussion, trauma, or stigma. Such quantification may be used for diagnosing a Soldier's trauma condition in the field or that of an athlete's.

Chlorination kinetics of glyphosate and its by-products: modeling approach.

PubMed

Brosillon, Stephan; Wolbert, Dominique; Lemasle, Marguerite; Roche, Pascal; Mehrsheikh, Akbar

2006-06-01

Chlorination reactions of glyphosate, glycine, and sodium cyanate were conducted in well-agitated reactors to generate experimental kinetic measurements for the simulation of chlorination kinetics under the conditions of industrial water purification plants. The contribution of different by-products to the overall degradation of glyphosate during chlorination has been identified. The kinetic rate constants for the chlorination of glyphosate and its main degradation products were either obtained by calculation according to experimental data or taken from published literature. The fit of the kinetic constants with experimental data allowed us to predict consistently the concentration of the majority of the transitory and terminal chlorination products identified in the course of the glyphosate chlorination process. The simulation results conducted at varying aqueous chlorine/glyphosate molar ratios have shown that glyphosate is expected to degrade in fraction of a second under industrial aqueous chlorination conditions. Glyphosate chlorination products are not stable under the conditions of drinking water chlorination and are degraded to small molecules common to the degradation of amino acids and other naturally occurring substances in raw water. The kinetic studies of the chlorination reaction of glyphosate, together with calculations based on kinetic modeling in conditions close to those at real water treatment plants, confirm the reaction mechanism that we have previously suggested for glyphosate chlorination.

Kinetics and Product Channels in Combustion Chemistry

DOE Office of Scientific and Technical Information (OSTI.GOV)

Hershberger, John F.

We report study of the chemical kinetics and/or photochemistry of several chemical reactions of potential interest in understanding the gas phase combustion chemistry of nitrogen-containing molecules. Studies completed during the final grant period include determination of quantum yields of the photolysis of HCNO, fulminic acid, a kinetics and product channel study of the reaction of CN radicals with methyl bromide, and study of the products of the reaction of hydroxymethyl radical with nitric oxide.

Design Principles of DNA Enzyme-Based Walkers: Translocation Kinetics and Photoregulation.

PubMed

Cha, Tae-Gon; Pan, Jing; Chen, Haorong; Robinson, Heather N; Li, Xiang; Mao, Chengde; Choi, Jong Hyun

2015-07-29

Dynamic DNA enzyme-based walkers complete their stepwise movements along the prescribed track through a series of reactions, including hybridization, enzymatic cleavage, and strand displacement; however, their overall translocation kinetics is not well understood. Here, we perform mechanistic studies to elucidate several key parameters that govern the kinetics and processivity of DNA enzyme-based walkers. These parameters include DNA enzyme core type and structure, upper and lower recognition arm lengths, and divalent metal cation species and concentration. A theoretical model is developed within the framework of single-molecule kinetics to describe overall translocation kinetics as well as each reaction step. A better understanding of kinetics and design parameters enables us to demonstrate a walker movement near 5 μm at an average speed of ∼1 nm s(-1). We also show that the translocation kinetics of DNA walkers can be effectively controlled by external light stimuli using photoisomerizable azobenzene moieties. A 2-fold increase in the cleavage reaction is observed when the hairpin stems of enzyme catalytic cores are open under UV irradiation. This study provides general design guidelines to construct highly processive, autonomous DNA walker systems and to regulate their translocation kinetics, which would facilitate the development of functional DNA walkers.

Kinetics and thermodynamics of living copolymerization processes

PubMed Central

2016-01-01

Theoretical advances are reported on the kinetics and thermodynamics of free and template-directed living copolymerizations. Until recently, the kinetic theory of these processes had only been established in the fully irreversible regime, in which the attachment rates are only considered. However, the entropy production is infinite in this regime and the approach to thermodynamic equilibrium cannot be investigated. For this purpose, the detachment rates should also be included. Inspite of this complication, the kinetics can be exactly solved in the regimes of steady growth and depolymerization. In this way, analytical expressions are obtained for the mean growth velocity, the statistical properties of the copolymer sequences, as well as the thermodynamic entropy production. The results apply to DNA replication, transcription and translation, allowing us to understand important aspects of molecular evolution. This article is part of the themed issue ‘Multiscale modelling at the physics–chemistry–biology interface’. PMID:27698043

Kinetics and thermodynamics of living copolymerization processes

NASA Astrophysics Data System (ADS)

Gaspard, Pierre

2016-11-01

Theoretical advances are reported on the kinetics and thermodynamics of free and template-directed living copolymerizations. Until recently, the kinetic theory of these processes had only been established in the fully irreversible regime, in which the attachment rates are only considered. However, the entropy production is infinite in this regime and the approach to thermodynamic equilibrium cannot be investigated. For this purpose, the detachment rates should also be included. Inspite of this complication, the kinetics can be exactly solved in the regimes of steady growth and depolymerization. In this way, analytical expressions are obtained for the mean growth velocity, the statistical properties of the copolymer sequences, as well as the thermodynamic entropy production. The results apply to DNA replication, transcription and translation, allowing us to understand important aspects of molecular evolution. This article is part of the themed issue 'Multiscale modelling at the physics-chemistry-biology interface'.

Solar-simulator-pumped atomic iodine laser kinetics

NASA Technical Reports Server (NTRS)

Wilson, H. W.; Raju, S.; Shiu, Y. J.

1983-01-01

The literature contains broad ranges of disagreement in kinetic data for the atomic iodine laser. A kinetic model of a solar-simulator-pumped iodine laser is used to select those kinetic data consistent with recent laser experiments at the Langley Research Center. Analysis of the solar-simulator-pumped laser experiments resulted in the following estimates of rate coefficients: for alkyl radical (n-C3F7) and atomic iodine (I) recombination, 4.3 x 10 to the 11th power (1.9) + or - cu cm/s; for n-C3F7I stabilized atomic iodine recombination (I + I) 3.7 x 10 to the -32nd power (2.3) + or -1 cm to the 6th power/s; and for molecular iodine (I2) quenching, 3.1 x 10 to the -11th power (1.6) + or - 1 cu cm/s. These rates are consistent with the recent measurements.

Control of DNA strand displacement kinetics using toehold exchange.

PubMed

Zhang, David Yu; Winfree, Erik

2009-12-02

DNA is increasingly being used as the engineering material of choice for the construction of nanoscale circuits, structures, and motors. Many of these enzyme-free constructions function by DNA strand displacement reactions. The kinetics of strand displacement can be modulated by toeholds, short single-stranded segments of DNA that colocalize reactant DNA molecules. Recently, the toehold exchange process was introduced as a method for designing fast and reversible strand displacement reactions. Here, we characterize the kinetics of DNA toehold exchange and model it as a three-step process. This model is simple and quantitatively predicts the kinetics of 85 different strand displacement reactions from the DNA sequences. Furthermore, we use toehold exchange to construct a simple catalytic reaction. This work improves the understanding of the kinetics of nucleic acid reactions and will be useful in the rational design of dynamic DNA and RNA circuits and nanodevices.

Simulation of ITG instabilities with fully kinetic ions and drift-kinetic electrons in tokamaks

NASA Astrophysics Data System (ADS)

Hu, Youjun; Chen, Yang; Parker, Scott

2017-10-01

A turbulence simulation model with fully kinetic ions and drift-kinetic electrons is being developed in the toroidal electromagnetic turbulence code GEM. This is motivated by the observation that gyrokinetic ions are not well justified in simulating turbulence in tokamak edges with steep density profile, where ρi / L is not small enough to be used a small parameter needed by the gyrokinetic ordering (here ρi is the gyro-radius of ions and L is the scale length of density profile). In this case, the fully kinetic ion model may be useful. Our model uses an implicit scheme to suppress high-frequency compressional Alfven waves and waves associated with the gyro-motion of ions. The ion orbits are advanced by using the well-known Boris scheme, which reproduces correct drift-motion even with large time-step comparable to the ion gyro-period. The field equation in this model is Ampere's law with the magnetic field eliminated by using an implicit scheme of Faraday's law. The current contributed by ions are computed by using an implicit δf method. A flux tube approximation is adopted, which makes the field equation much easier to solve. Numerical results of electromagnetic ITG obtained from this model will be presented and compared with the gyrokinetic results. This work is supported by U.S. Department of Energy, Office of Fusion Energy Sciences under Award No. DE-SC0008801.

The kinetically dominated quasar 3C 418

NASA Astrophysics Data System (ADS)

Punsly, Brian; Kharb, Preeti

2017-06-01

The existence of quasars that are kinetically dominated, where the jet kinetic luminosity, Q, is larger than the total (infrared to X-ray) thermal luminosity of the accretion flow, Lbol, provides a strong constraint on the fundamental physics of relativistic jet formation. Since quasars have high values of Lbol by definition, only ˜10 kinetically dominated quasars (with \\overline{Q}/L_{bol}>1) have been found, where \\overline{Q} is the long-term time-averaged jet power. We use low-frequency (151 MHz-1.66 GHz) observations of the quasar 3C 418 to determine \\overline{Q}≈ 5.5 ± 1.3 × 10^{46} {erg s^{-1}}. Analysis of the rest-frame ultraviolet spectrum indicates that this equates to 0.57 ± 0.28 times the Eddington luminosity of the central supermassive black hole and \\overline{Q}/L_{bol} ≈ 4.8 ± 3.1, making 3C 418 one of the most kinetically dominated quasars found to date. It is shown that this maximal \\overline{Q}/L_{bol} is consistent with models of magnetically arrested accretion of jet production in which the jet production reproduces the observed trend of a decrement in the extreme ultraviolet continuum as the jet power increases. This maximal condition corresponds to an almost complete saturation of the inner accretion flow with vertical large-scale magnetic flux (maximum saturation).

Data acquisition system for chemical kinetic studies

PubMed Central

Zhu, Yu-zhen; Zhou, Xin; Zang, Xiang-sheng

1989-01-01

A microcomputer-interfaced data acquisition system for chemical kinetics (interfacing with laboratory analogue instruments) has been developed. Analogue signals from instruments used in kinetics experiments are amplifed by a wide-range adjustable high-gain operational amplifier and smoothed by an op-based filter, and then digitized at rates of up to 104 samples per channel by an ADC 0816 digitizer. The ADC data transfer and manipulation routine was written in Assembler code and in high-level language; the graphics package and data treatment package is in Basic. For the various sampling speeds, all of the program can be written using Basic-Assembler or completely in Assembler if a high sampling rate is needed. Several numerical treatment methods for chemical kinetics have been utilized to smooth the data from experiments. The computer-interfaced system for second-order chemical kinetic studies was applied to the determination of the rate constant of the saponification of ethyl acetate at 35°C. For this specific problem, an averaging treatment was used which can be called an interval method. The use of this method avoids the diffcully of measuring the starting time of the reaction. Two groups of experimental data and results were used to evaluate the systems performance. All of the results obtained are in agreement with the reference value. PMID:18925219

Production of a sterile species: Quantum kinetics

NASA Astrophysics Data System (ADS)

Boyanovsky, D.; Ho, C. M.

2007-10-01

Production of a sterile species is studied within an effective model of active-sterile neutrino mixing in a medium in thermal equilibrium. The quantum kinetic equations for the distribution functions and coherences are obtained from two independent methods: the effective action and the quantum master equation. The decoherence time scale for active-sterile oscillations is τdec=2/Γaa, but the evolution of the distribution functions is determined by the two different time scales associated with the damping rates of the quasiparticle modes in the medium: Γ1=Γaacos⁡2θm; Γ2=Γaasin⁡2θm where Γaa is the interaction rate of the active species in the absence of mixing and θm the mixing angle in the medium. These two time scales are widely different away from Mikheyev-Smirnov-Wolfenstein resonances and preclude the kinetic description of active-sterile production in terms of a simple rate equation. We give the complete set of quantum kinetic equations for the active and sterile populations and coherences and discuss in detail the various approximations. A generalization of the active-sterile transition probability in a medium is provided via the quantum master equation. We derive explicitly the usual quantum kinetic equations in terms of the “polarization vector” and show their equivalence to those obtained from the quantum master equation and effective action.

Detection of kinetic change points in piece-wise linear single molecule motion

NASA Astrophysics Data System (ADS)

Hill, Flynn R.; van Oijen, Antoine M.; Duderstadt, Karl E.

2018-03-01

Single-molecule approaches present a powerful way to obtain detailed kinetic information at the molecular level. However, the identification of small rate changes is often hindered by the considerable noise present in such single-molecule kinetic data. We present a general method to detect such kinetic change points in trajectories of motion of processive single molecules having Gaussian noise, with a minimum number of parameters and without the need of an assumed kinetic model beyond piece-wise linearity of motion. Kinetic change points are detected using a likelihood ratio test in which the probability of no change is compared to the probability of a change occurring, given the experimental noise. A predetermined confidence interval minimizes the occurrence of false detections. Applying the method recursively to all sub-regions of a single molecule trajectory ensures that all kinetic change points are located. The algorithm presented allows rigorous and quantitative determination of kinetic change points in noisy single molecule observations without the need for filtering or binning, which reduce temporal resolution and obscure dynamics. The statistical framework for the approach and implementation details are discussed. The detection power of the algorithm is assessed using simulations with both single kinetic changes and multiple kinetic changes that typically arise in observations of single-molecule DNA-replication reactions. Implementations of the algorithm are provided in ImageJ plugin format written in Java and in the Julia language for numeric computing, with accompanying Jupyter Notebooks to allow reproduction of the analysis presented here.

The Kinetics and Inhibition of the Enzyme Methemoglobin Reductase

ERIC Educational Resources Information Center

Splittgerber, A. G.; And Others

1975-01-01

Describes an undergraduate biochemistry experiment which involves the preparation and kinetics of an oxidation-reduction enzyme system, methemoglobin reductase. A crude enzyme extract is prepared and assayed spectrophotometrically. The enzyme system obeys Michaelis-Menton kinetics with respect to both substrate and the NADH cofactor. (MLH)

Ultrafast Carbon Dioxide Sorption Kinetics Using Lithium Silicate Nanowires.

PubMed

Nambo, Apolo; He, Juan; Nguyen, Tu Quang; Atla, Veerendra; Druffel, Thad; Sunkara, Mahendra

2017-06-14

In this paper, the Li 4 SiO 4 nanowires (NWs) were shown to be promising for CO 2 capture with ultrafast kinetics. Specifically, the nanowire powders exhibited an uptake of 0.35 g g -1 of CO 2 at an ultrafast adsorption rate of 0.22 g g -1 min -1 at 650-700 °C. Lithium silicate (Li 4 SiO 4 ) nanowires and nanopowders were synthesized using a "solvo-plasma" technique involving plasma oxidation of silicon precursors mixed with lithium hydroxide. The kinetic parameter values (k) extracted from sorption kinetics obtained using NW powders are 1 order of magnitude higher than those previously reported for the Li 4 SiO 4 -CO 2 reaction system. The time scales for CO 2 sorption using nanowires are approximately 3 min and two orders magnitude faster compared to those obtained using lithium silicate powders with spherical morphologies and aggregates. Furthermore, Li 4 SiO 4 nanowire powders showed reversibility through sorption-desorption cycles indicating their suitability for CO 2 capture applications. All of the morphologies of Li 4 SiO 4 powders exhibited a double exponential behavior in the adsorption kinetics indicating two distinct time constants for kinetic and the mass transfer limited regimes.

Evaluation of the cure kinetics of the wood/pMDI bondline

Treesearch

David P. Harper; Michael P. Wolcott; Timothy G. Rials

2001-01-01

Micro-dielectric analysis (µDEA) and differentia1 scanning calorimetry (DSC) were used to monitor cure of polymeric diphenyl-methane diisocyanate (pMDI) resin with wood strands in a saturated steam environment. A first-order autocatalyzed kinetic model was employed to determine kinetic parameters. The kinetics were found to follow an Arrhenius relation. A single ramp...

TRANSITION FROM KINETIC TO MHD BEHAVIOR IN A COLLISIONLESS PLASMA

DOE Office of Scientific and Technical Information (OSTI.GOV)

Parashar, Tulasi N.; Matthaeus, William H.; Shay, Michael A.

The study of kinetic effects in heliospheric plasmas requires representation of dynamics at sub-proton scales, but in most cases the system is driven by magnetohydrodynamic (MHD) activity at larger scales. The latter requirement challenges available computational resources, which raises the question of how large such a system must be to exhibit MHD traits at large scales while kinetic behavior is accurately represented at small scales. Here we study this implied transition from kinetic to MHD-like behavior using particle-in-cell (PIC) simulations, initialized using an Orszag–Tang Vortex. The PIC code treats protons, as well as electrons, kinetically, and we address the questionmore » of interest by examining several different indicators of MHD-like behavior.« less

Non-kinetic Targeting Risk Assessment Methodology (NKTRAM)

DTIC Science & Technology

2014-07-22

kinetic inetic Targe J TGTs & E ement of ris s and dama ian / non-co Treaty Orga kinetic enga rce ( IATF ) t of selecting perational and prioritiza c...t e activities. T c engagemen is often inapp of a tank, is and Major S ( IATF ). ssessm opose a non ral Damage / munitions ting Risk As ) staff...prototype stage and is classified. As such, it will not be discussed or identified within this SL. In November 2013, the IATF red teamed the prototype

Exploring the chemical kinetics of partially oxidized intermediates by combining experiments, theory, and kinetic modeling.

PubMed

Hoyermann, Karlheinz; Mauß, Fabian; Olzmann, Matthias; Welz, Oliver; Zeuch, Thomas

2017-07-19

Partially oxidized intermediates play a central role in combustion and atmospheric chemistry. In this perspective, we focus on the chemical kinetics of alkoxy radicals, peroxy radicals, and Criegee intermediates, which are key species in both combustion and atmospheric environments. These reactive intermediates feature a broad spectrum of chemical diversity. Their reactivity is central to our understanding of how volatile organic compounds are degraded in the atmosphere and converted into secondary organic aerosol. Moreover, they sensitively determine ignition timing in internal combustion engines. The intention of this perspective article is to provide the reader with information about the general mechanisms of reactions initiated by addition of atomic and molecular oxygen to alkyl radicals and ozone to alkenes. We will focus on critical branching points in the subsequent reaction mechanisms and discuss them from a consistent point of view. As a first example of our integrated approach, we will show how experiment, theory, and kinetic modeling have been successfully combined in the first infrared detection of Criegee intermediates during the gas phase ozonolysis. As a second example, we will examine the ignition timing of n-heptane/air mixtures at low and intermediate temperatures. Here, we present a reduced, fuel size independent kinetic model of the complex chemistry initiated by peroxy radicals that has been successfully applied to simulate standard n-heptane combustion experiments.

Electron acceleration and kinetic energy tailoring via ultrafast terahertz fields.

PubMed

Greig, S R; Elezzabi, A Y

2014-11-17

We propose a mechanism for tuning the kinetic energy of surface plasmon generated electron pulses through control of the time delay between a pair of externally applied terahertz pulses. Varying the time delay results in translation, compression, and broadening of the kinetic energy spectrum of the generated electron pulse. We also observe that the electrons' kinetic energy dependence on the carrier envelope phase of the surface plasmon is preserved under the influence of a terahertz electric field.

Kinetics of the subtransition in dipalmitoylphosphatidylcholine.

PubMed

Tristram-Nagle, S; Wiener, M C; Yang, C P; Nagle, J F

1987-07-14

The kinetics of the interconversions of the subgel and gel phases in dipalmitoylphosphatidylcholine have been studied by using differential dilatometry, differential scanning calorimetry (DSC), and neutral buoyancy centrifugation as a function of incubation temperature and deuteriation of the solvent. As seen by others, DSC scans show two peaks in the subgel transition region for incubation temperatures below 1 degree C. After incubation at 0.1 degree C, the DSC peak that occurs at the lower scanning temperature appears with an incubation half-time of 0.5 day and eventually converts into a peak at higher scanning temperature with an incubation half-time of 18 days. By varying the scanning rate, we show that these two peaks merge into one at slow scanning rates with a common equilibrium transition temperature of 13.8 degrees C, in agreement with equilibrium calorimetry and dilatometry (delta V = 0.017 +/- 0.001 mL/g). For incubation temperatures above 4.6 degrees C, only one peak appears in both scanning dilatometry and calorimetry. While the initial rate of subgel conversion is smaller at the higher incubation temperatures, after 300 h a higher percentage of the sample has converted to subgel than at the lower incubation temperatures. We suggest that higher incubation temperatures (near 5 degrees C) are preferable for forming the stable subgel phase, and we present a colliding domain picture that indicates why this may be so. Our results in D2O and the similarity of the kinetics of volume decrease with the kinetics of wide-angle diffraction lines also support the suggestion that the partial loss of interlamellar water plays a kinetic role in subgel formation.

Quantitative kinetic theory of active matter

NASA Astrophysics Data System (ADS)

Ihle, Thomas; Chou, Yen-Liang

2014-03-01

Models of self-driven agents similar to the Vicsek model [Phys. Rev. Lett. 75 (1995) 1226] are studied by means of kinetic theory. In these models, particles try to align their travel directions with the average direction of their neighbours. At strong alignment a globally ordered state of collective motion forms. An Enskog-like kinetic theory is derived from the exact Chapman-Kolmogorov equation in phase space using Boltzmann's mean-field approximation of molecular chaos. The kinetic equation is solved numerically by a nonlocal Lattice-Boltzmann-like algorithm. Steep soliton-like waves are observed that lead to an abrupt jump of the global order parameter if the noise level is changed. The shape of the wave is shown to follow a novel scaling law and to quantitatively agree within 3 % with agent-based simulations at large particle speeds. This provides a mean-field mechanism to change the second-order character of the flocking transition to first order. Diagrammatic techniques are used to investigate small particle speeds, where the mean-field assumption of Molecular Chaos is invalid and where correlation effects need to be included.

Analyte discrimination from chemiresistor response kinetics.

PubMed

Read, Douglas H; Martin, James E

2010-08-15

Chemiresistors are polymer-based sensors that transduce the sorption of a volatile organic compound into a resistance change. Like other polymer-based gas sensors that function through sorption, chemiresistors can be selective for analytes on the basis of the affinity of the analyte for the polymer. However, a single sensor cannot, in and of itself, discriminate between analytes, since a small concentration of an analyte that has a high affinity for the polymer might give the same response as a high concentration of another analyte with a low affinity. In this paper we use a field-structured chemiresistor to demonstrate that its response kinetics can be used to discriminate between analytes, even between those that have identical chemical affinities for the polymer phase of the sensor. The response kinetics is shown to be independent of the analyte concentration, and thus the magnitude of the sensor response, but is found to vary inversely with the analyte's saturation vapor pressure. Saturation vapor pressures often vary greatly from analyte to analyte, so analysis of the response kinetics offers a powerful method for obtaining analyte discrimination from a single sensor.

Determination of kinetic energy applied by center pivot sprinklers

USDA-ARS?s Scientific Manuscript database

The kinetic energy of discrete drops impacting a bare soil surface is generally observed to lead to a drastic reduction in water infiltration rate due to soil surface seal formation. Under center pivot sprinkler irrigation, kinetic energy transferred to the soil prior to crop canopy development can...

Understanding the kinetic mechanism of RNA single base pair formation

PubMed Central

Xu, Xiaojun; Yu, Tao; Chen, Shi-Jie

2016-01-01

RNA functions are intrinsically tied to folding kinetics. The most elementary step in RNA folding is the closing and opening of a base pair. Understanding this elementary rate process is the basis for RNA folding kinetics studies. Previous studies mostly focused on the unfolding of base pairs. Here, based on a hybrid approach, we investigate the folding process at level of single base pairing/stacking. The study, which integrates molecular dynamics simulation, kinetic Monte Carlo simulation, and master equation methods, uncovers two alternative dominant pathways: Starting from the unfolded state, the nucleotide backbone first folds to the native conformation, followed by subsequent adjustment of the base conformation. During the base conformational rearrangement, the backbone either retains the native conformation or switches to nonnative conformations in order to lower the kinetic barrier for base rearrangement. The method enables quantification of kinetic partitioning among the different pathways. Moreover, the simulation reveals several intriguing ion binding/dissociation signatures for the conformational changes. Our approach may be useful for developing a base pair opening/closing rate model. PMID:26699466

Kinetic Energy Corrections for Slip-Stick Behavior in Brittle Adhesives

NASA Technical Reports Server (NTRS)

Macon, David J.; Anderson, Greg L.; McCool, Alex (Technical Monitor)

2001-01-01

Fracture mechanics is the study of the failure of a body that contains a flaw. In the energy balance approach to fracture mechanics, contributions from the external work and elastic strain energy are accounted for but rarely are corrections for the kinetic energy given. Under slip-stick conditions, part of the external work is expended as kinetic energy. The magnitude of this kinetic energy depends upon the shape of the crack. A specimen with a blunt crack will fail at a high load and the crack will catastrophically travel through the material until the kinetic energy is dissipated. Material with a sharp crack will fail at a lower load but will still be catastrophic in nature. A kinetic term is incorporated into the energy balance approach. This term accounts for the velocity of the crack after failure and how far the crack travels before arresting. This correction makes the shape of the initiation crack irrelevant. When applied to data generated by tapered double cantilever beam specimens under slip-stick conditions, the scatter in the measured critical strain energy release rate is significantly reduced.

Formation kinetics of gemfibrozil chlorination reaction products: analysis and application.

PubMed

Krkosek, Wendy H; Peldszus, Sigrid; Huck, Peter M; Gagnon, Graham A

2014-07-01

Aqueous chlorination kinetics of the lipid regulator gemfibrozil and the formation of reaction products were investigated in deionized water over the pH range 3 to 9, and in two wastewater matrices. Chlorine oxidation of gemfibrozil was found to be highly dependent on pH. No statistically significant degradation of gemfibrozil was observed at pH values greater than 7. Gemfibrozil oxidation between pH 4 and 7 was best represented by first order kinetics. At pH 3, formation of three reaction products was observed. 4'-C1Gem was the only reaction product formed from pH 4-7 and was modeled with zero order kinetics. Chlorine oxidation of gemfibrozil in two wastewater matrices followed second order kinetics. 4'-C1Gem was only formed in wastewater with pH below 7. Deionized water rate kinetic models were applied to two wastewater effluents with gemfibrozil concentrations reported in literature in order to calculate potential mass loading rates of 4'C1Gem to the receiving water.

Kinetic Measurements Reveal Enhanced Protein-Protein Interactions at Intercellular Junctions

PubMed Central

Shashikanth, Nitesh; Kisting, Meridith A.; Leckband, Deborah E.

2016-01-01

The binding properties of adhesion proteins are typically quantified from measurements with soluble fragments, under conditions that differ radically from the confined microenvironment of membrane bound proteins in adhesion zones. Using classical cadherin as a model adhesion protein, we tested the postulate that confinement within quasi two-dimensional intercellular gaps exposes weak protein interactions that are not detected in solution binding assays. Micropipette-based measurements of cadherin-mediated, cell-cell binding kinetics identified a unique kinetic signature that reflects both adhesive (trans) bonds between cadherins on opposing cells and lateral (cis) interactions between cadherins on the same cell. In solution, proposed lateral interactions were not detected, even at high cadherin concentrations. Mutations postulated to disrupt lateral cadherin association altered the kinetic signatures, but did not affect the adhesive (trans) binding affinity. Perturbed kinetics further coincided with altered cadherin distributions at junctions, wound healing dynamics, and paracellular permeability. Intercellular binding kinetics thus revealed cadherin interactions that occur within confined, intermembrane gaps but not in solution. Findings further demonstrate the impact of these revealed interactions on the organization and function of intercellular junctions. PMID:27009566

Kinetics and thermodynamics of living copolymerization processes.

PubMed

Gaspard, Pierre

2016-11-13

Theoretical advances are reported on the kinetics and thermodynamics of free and template-directed living copolymerizations. Until recently, the kinetic theory of these processes had only been established in the fully irreversible regime, in which the attachment rates are only considered. However, the entropy production is infinite in this regime and the approach to thermodynamic equilibrium cannot be investigated. For this purpose, the detachment rates should also be included. Inspite of this complication, the kinetics can be exactly solved in the regimes of steady growth and depolymerization. In this way, analytical expressions are obtained for the mean growth velocity, the statistical properties of the copolymer sequences, as well as the thermodynamic entropy production. The results apply to DNA replication, transcription and translation, allowing us to understand important aspects of molecular evolution.This article is part of the themed issue 'Multiscale modelling at the physics-chemistry-biology interface'. © 2016 The Author(s).

Kinetics model of bainitic transformation with stress

NASA Astrophysics Data System (ADS)

Zhou, Mingxing; Xu, Guang; Hu, Haijiang; Yuan, Qing; Tian, Junyu

2018-01-01

Thermal simulations were conducted on a Gleeble 3800 simulator. The main purpose is to investigate the effects of stress on the kinetics of bainitic transformation in a Fe-C-Mn-Si advanced high strength bainitic steel. Previous studies on modeling the kinetics of stress affected bainitic transformation only considered the stress below the yield strength of prior austenite. In the present study, the stress above the yield strength of prior austenite is taken into account. A new kinetics model of bainitic transformation dependent on the stress (including the stresses below and above the yield strength of prior austenite) and the transformation temperature is proposed. The new model presents a good agreement with experimental results. In addition, it is found that the acceleration degree of stress on bainitic transformation increases with the stress whether its magnitude is below or above the yield strength of austenite, but the increasing rate gradually slows down when the stress is above the yield strength of austenite.

Repopulation Kinetics and the Linear-Quadratic Model

NASA Astrophysics Data System (ADS)

O'Rourke, S. F. C.; McAneney, H.; Starrett, C.; O'Sullivan, J. M.

2009-08-01

The standard Linear-Quadratic (LQ) survival model for radiotherapy is used to investigate different schedules of radiation treatment planning for advanced head and neck cancer. We explore how these treament protocols may be affected by different tumour repopulation kinetics between treatments. The laws for tumour cell repopulation include the logistic and Gompertz models and this extends the work of Wheldon et al. [1], which was concerned with the case of exponential repopulation between treatments. Treatment schedules investigated include standarized and accelerated fractionation. Calculations based on the present work show, that even with growth laws scaled to ensure that the repopulation kinetics for advanced head and neck cancer are comparable, considerable variation in the survival fraction to orders of magnitude emerged. Calculations show that application of the Gompertz model results in a significantly poorer prognosis for tumour eradication. Gaps in treatment also highlight the differences in the LQ model with the effect of repopulation kinetics included.

The kinetics of thermal generation of flavour.

PubMed

Parker, Jane K

2013-01-01

Control and optimisation of flavour is the ultimate challenge for the food and flavour industry. The major route to flavour formation during thermal processing is the Maillard reaction, which is a complex cascade of interdependent reactions initiated by the reaction between a reducing sugar and an amino compound. The complexity of the reaction means that researchers turn to kinetic modelling in order to understand the control points of the reaction and to manipulate the flavour profile. Studies of the kinetics of flavour formation have developed over the past 30 years from single- response empirical models of binary aqueous systems to sophisticated multi-response models in food matrices, based on the underlying chemistry, with the power to predict the formation of some key aroma compounds. This paper discusses in detail the development of kinetic models of thermal generation of flavour and looks at the challenges involved in predicting flavour. Copyright © 2012 Society of Chemical Industry.

VAMPnets for deep learning of molecular kinetics.

PubMed

Mardt, Andreas; Pasquali, Luca; Wu, Hao; Noé, Frank

2018-01-02

There is an increasing demand for computing the relevant structures, equilibria, and long-timescale kinetics of biomolecular processes, such as protein-drug binding, from high-throughput molecular dynamics simulations. Current methods employ transformation of simulated coordinates into structural features, dimension reduction, clustering the dimension-reduced data, and estimation of a Markov state model or related model of the interconversion rates between molecular structures. This handcrafted approach demands a substantial amount of modeling expertise, as poor decisions at any step will lead to large modeling errors. Here we employ the variational approach for Markov processes (VAMP) to develop a deep learning framework for molecular kinetics using neural networks, dubbed VAMPnets. A VAMPnet encodes the entire mapping from molecular coordinates to Markov states, thus combining the whole data processing pipeline in a single end-to-end framework. Our method performs equally or better than state-of-the-art Markov modeling methods and provides easily interpretable few-state kinetic models.

Modified kinetics of enzymes interacting with nanoparticles

NASA Astrophysics Data System (ADS)

Díaz, Sebastián. A.; Breger, Joyce C.; Malanoski, Anthony; Claussen, Jonathan C.; Walper, Scott A.; Ancona, Mario G.; Brown, Carl W.; Stewart, Michael H.; Oh, Eunkeu; Susumu, Kimihiro; Medintz, Igor L.

2015-08-01

Enzymes are important players in multiple applications, be it bioremediation, biosynthesis, or as reporters. The business of catalysis and inhibition of enzymes is a multibillion dollar industry and understanding the kinetics of commercial enzymes can have a large impact on how these systems are optimized. Recent advances in nanotechnology have opened up the field of nanoparticle (NP) and enzyme conjugates and two principal architectures for NP conjugate systems have been developed. In the first example the enzyme is bound to the NP in a persistent manner, here we find that key factors such as directed enzyme conjugation allow for enhanced kinetics. Through controlled comparative experiments we begin to tease out specific mechanisms that may account for the enhancement. The second system is based on dynamic interactions of the enzymes with the NP. The enzyme substrate is bound to the NP and the enzyme is free in solution. Here again we find that there are many variables , such as substrate positioning and NP selection, that modify the kinetics.

The Particle-in-Cell and Kinetic Simulation Software Center

NASA Astrophysics Data System (ADS)

Mori, W. B.; Decyk, V. K.; Tableman, A.; Fonseca, R. A.; Tsung, F. S.; Hu, Q.; Winjum, B. J.; An, W.; Dalichaouch, T. N.; Davidson, A.; Hildebrand, L.; Joglekar, A.; May, J.; Miller, K.; Touati, M.; Xu, X. L.

2017-10-01

The UCLA Particle-in-Cell and Kinetic Simulation Software Center (PICKSC) aims to support an international community of PIC and plasma kinetic software developers, users, and educators; to increase the use of this software for accelerating the rate of scientific discovery; and to be a repository of knowledge and history for PIC. We discuss progress towards making available and documenting illustrative open-source software programs and distinct production programs; developing and comparing different PIC algorithms; coordinating the development of resources for the educational use of kinetic software; and the outcomes of our first sponsored OSIRIS users workshop. We also welcome input and discussion from anyone interested in using or developing kinetic software, in obtaining access to our codes, in collaborating, in sharing their own software, or in commenting on how PICKSC can better serve the DPP community. Supported by NSF under Grant ACI-1339893 and by the UCLA Institute for Digital Research and Education.

2D Implosion Simulations with a Kinetic Particle Code

NASA Astrophysics Data System (ADS)

Sagert, Irina; Even, Wesley; Strother, Terrance

2017-10-01

Many problems in laboratory and plasma physics are subject to flows that move between the continuum and the kinetic regime. We discuss two-dimensional (2D) implosion simulations that were performed using a Monte Carlo kinetic particle code. The application of kinetic transport theory is motivated, in part, by the occurrence of non-equilibrium effects in inertial confinement fusion (ICF) capsule implosions, which cannot be fully captured by hydrodynamics simulations. Kinetic methods, on the other hand, are able to describe both, continuum and rarefied flows. We perform simple 2D disk implosion simulations using one particle species and compare the results to simulations with the hydrodynamics code RAGE. The impact of the particle mean-free-path on the implosion is also explored. In a second study, we focus on the formation of fluid instabilities from induced perturbations. I.S. acknowledges support through the Director's fellowship from Los Alamos National Laboratory. This research used resources provided by the LANL Institutional Computing Program.

Peptide concentration alters intermediate species in amyloid β fibrillation kinetics

DOE Office of Scientific and Technical Information (OSTI.GOV)

Garvey, M., E-mail: megan.garvey@molbiotech.rwth-aachen.de; Morgado, I., E-mail: immorgado@ualg.pt

2013-04-12

Highlights: ► Aβ(1–40) aggregation in vitro has been monitored at different concentrations. ► Aβ(1–40) fibrillation does not always follow conventional kinetic mechanisms. ► We demonstrate non-linear features in the kinetics of Aβ(1–40) fibril formation. ► At high Aβ(1–40) concentrations secondary processes dictate fibrillation speed. ► Intermediate species may play significant roles on final amyloid fibril development. -- Abstract: The kinetic mechanism of amyloid aggregation remains to be fully understood. Investigations into the species present in the different kinetic phases can assist our comprehension of amyloid diseases and further our understanding of the mechanism behind amyloid β (Aβ) (1–40) peptide aggregation.more » Thioflavin T (ThT) fluorescence and transmission electron microscopy (TEM) have been used in combination to monitor Aβ(1–40) aggregation in vitro at both normal and higher than standard concentrations. The observed fibrillation behaviour deviates, in several respects, from standard concepts of the nucleation–polymerisation models and shows such features as concentration-dependent non-linear effects in the assembly mechanism. Aβ(1–40) fibrillation kinetics do not always follow conventional kinetic mechanisms and, specifically at high concentrations, intermediate structures become populated and secondary processes may further modify the fibrillation mechanism.« less

Kinetics of natural oxidant demand by permanganate in aquifer solids.

PubMed

Urynowicz, Michael A; Balu, Balamurali; Udayasankar, Umamaheshwari

2008-02-19

During in situ chemical oxidation with permanganate, natural organic matter and other reduced species in the subsurface compete with the target compounds for the available oxidant and can exert a significant natural oxidant demand. This competition between target and nontarget compounds can have a significant impact on the permeation, dispersal, and persistence of permanganate in the subsurface. The kinetics of natural oxidant demand by permanganate was investigated using a composite sample made up of aquifer material collected from three different sites. The study found that although the depletion of organic carbon increased with increased permanganate dosage and increased reaction period, the mass ratio of MnO(4)(-):OC (wt/wt) was relatively constant over time (11.4+/-0.9). The reaction order and rate with respect to permanganate were found to decrease with time suggesting a continuum of reactions with the slower reactions becoming more controlling with time. However, the data also suggests that this continuum of reactions can be simplified into short- and long-term kinetic expressions representing fast and slow reactions. An independent first-order kinetic model with separate fast and slow reaction rate constants was used to successfully describe the complete kinetic expression of natural oxidant demand. The kinetic parameters used in the model are easily determined and can be used to better understand the complex kinetics of natural oxidant demand.

Explosive sport training and torque kinetics in children.

PubMed

Dotan, Raffy; Mitchell, Cameron J; Cohen, Rotem; Gabriel, David; Klentrou, Panagiota; Falk, Bareket

2013-07-01

A high rate of force development (RFD) is often more important than maximal force in daily and sports activities. In children, resistance training has been shown to increase maximal force. It is unclear whether, or to what extent, can children improve RFD and force kinetics. For this study, we compared strength and force kinetics of boy gymnasts with those of untrained boys and untrained men. Eight boy gymnasts (age, 9.5 ± 1.2 y), 20 untrained boys (age, 10.1 ± 1.3 y), and 20 untrained men (age, 22.9 ± 4.4 y) performed maximal, explosive, isometric elbow flexions (EF) and knee flexions (KF). Peak torque (maximal voluntary contraction (MVC)), elapsed times to 10%-100% MVC, peak rate of torque development (RTDpk), and other kinetics parameters were determined. When gymnasts were compared with untrained boys, size-normalized EF MVC was 11%-20% higher, RTDpk was 32% higher, and times to 30% and 80% MVC were 16% and 55% shorter, respectively (p < 0.05). No corresponding differences were observed in KF. Furthermore, although the normalized EF MVC was 28% lower in gymnasts than in men (p < 0.001), their torque kinetics parameters were similar. These findings highlight the specificity of gymnastics training, which markedly elevated the torque kinetics of young, prepubertal boys to adult levels, but only moderately affected peak torque. It is suggested that neurologic adaptations, such as enhanced firing and activation rates or increased type II motor-unit recruitment, as well as changes in musculotendinous stiffness, could explain these findings.

Kinetics of Cd(ii) adsorption and desorption on ferrihydrite: experiments and modeling.

PubMed

Liang, Yuzhen; Tian, Lei; Lu, Yang; Peng, Lanfang; Wang, Pei; Lin, Jingyi; Cheng, Tao; Dang, Zhi; Shi, Zhenqing

2018-05-15

The kinetics of Cd(ii) adsorption/desorption on ferrihydrite is an important process affecting the fate, transport, and bioavailability of Cd(ii) in the environment, which was rarely systematically studied and understood at quantitative levels. In this work, a combination of stirred-flow kinetic experiments, batch adsorption equilibrium experiments, high-resolution transmission electron microscopy (HR-TEM), and mechanistic kinetic modeling were used to study the kinetic behaviors of Cd(ii) adsorption/desorption on ferrihydrite. HR-TEM images showed the open, loose, and sponge-like structure of ferrihydrite. The batch adsorption equilibrium experiments revealed that higher pH and initial metal concentration increased Cd(ii) adsorption on ferrihydrite. The stirred-flow kinetic results demonstrated the increased adsorption rate and capacity as a result of the increased pH, influent concentration, and ferrihydrite concentration. The mechanistic kinetic model successfully described the kinetic behaviors of Cd(ii) during the adsorption and desorption stages under various chemistry conditions. The model calculations showed that the adsorption rate coefficients varied as a function of solution chemistry, and the relative contributions of the weak and strong ferrihydrite sites for Cd(ii) binding varied with time at different pH and initial metal concentrations. Our model is able to quantitatively assess the contributions of each individual ferrihydrite binding site to the overall Cd(ii) adsorption/desorption kinetics. This study provided insights into the dynamic behavior of Cd(ii) and a predictive modeling tool for Cd(ii) adsorption/desorption kinetics when ferrihydrite is present, which may be helpful for the risk assessment and management of Cd contaminated sites.

Defining Nitrogen Kinetics for Air Break in Prebreath

NASA Technical Reports Server (NTRS)

Conkin, Johnny

2010-01-01

Actual tissue nitrogen (N2) kinetics are complex; the uptake and elimination is often approximated with a single half-time compartment in statistical descriptions of denitrogenation [prebreathe(PB)] protocols. Air breaks during PB complicate N2 kinetics. A comparison of symmetrical versus asymmetrical N2 kinetics was performed using the time to onset of hypobaric decompression sickness (DCS) as a surrogate for actual venous N2 tension. METHODS: Published results of 12 tests involving 179 hypobaric exposures in altitude chambers after PB, with and without airbreaks, provide the complex protocols from which to model N2 kinetics. DCS survival time for combined control and airbreaks were described with an accelerated log logistic model where N2 uptake and elimination before, during, and after the airbreak was computed with a simple exponential function or a function that changed half-time depending on ambient N2 partial pressure. P1N2-P2 = (Delta)P defined decompression dose for each altitude exposure, where P2 was the test altitude and P1N2 was computed N2 pressure at the beginning of the altitude exposure. RESULTS: The log likelihood (LL) without decompression dose (null model) was -155.6, and improved (best-fit) to -97.2 when dose was defined with a 240 min half-time for both N2 elimination and uptake during the PB. The description of DCS survival time was less precise with asymmetrical N2 kinetics, for example, LL was -98.9 with 240 min half-time elimination and 120 min half-time uptake. CONCLUSION: The statistical regression described survival time mechanistically linked to symmetrical N2 kinetics during PBs that also included airbreaks. The results are data-specific, and additional data may change the conclusion. The regression is useful to compute additional PB time to compensate for an airbreak in PB within the narrow range of tested conditions.

Defining Nitrogen Kinetics for Air Break in Prebreathe

NASA Technical Reports Server (NTRS)

Conkin, Johnny

2009-01-01

Actual tissue nitrogen (N2) kinetics are complex; the uptake and elimination is often approximated with a single half-time compartment in statistical descriptions of denitrogenation [prebreathe (PB)] protocols. Air breaks during PB complicate N2 kinetics. A comparison of symmetrical versus asymmetrical N2 kinetics was performed using the time to onset of hypobaric decompression sickness (DCS) as a surrogate for actual venous N2 tension. Published results of 12 tests involving 179 hypobaric exposures in altitude chambers after PB, with and without air breaks, provide the complex protocols from which to model N2 kinetics. DCS survival time for combined control and air breaks were described with an accelerated log logistic model where N2 uptake and elimination before, during, and after the air break was computed with a simple exponential function or a function that changed half-time depending on ambient N2 partial pressure. P1N2-P2 = delta P defined DCS dose for each altitude exposure, where P2 was the test altitude and P1N2 was computed N2 pressure at the beginning of the altitude exposure. The log likelihood (LL) without DCS dose (null model) was -155.6, and improved (best-fit) to -97.2 when dose was defined with a 240 min half-time for both N2 elimination and uptake during the PB. The description of DCS survival time was less precise with asymmetrical N2 kinetics, for example, LL was -98.9 with 240 min half-time elimination and 120 min half-time uptake. The statistical regression described survival time mechanistically linked to symmetrical N2 kinetics during PBs that also included air breaks. The results are data-specific, and additional data may change the conclusion. The regression is useful to compute additional PB time to compensate for an air break in PB within the narrow range of tested conditions.