Individual and mixture effects of selected pharmaceuticals on larval development of the estuarine shrimp Palaemon longirostris.

PubMed

González-Ortegón, Enrique; Blasco, Julian; Nieto, Elena; Hampel, Miriam; Le Vay, Lewis; Giménez, Luis

2016-01-01

Few ecotoxicological studies incorporate within the experimental design environmental variability and mixture effects when assessing the impact of pollutants on organisms. We have studied the combined effects of selected pharmaceutical compounds and environmental variability in terms of salinity and temperature on survival, development and body mass of larvae of the estuarine shrimp Palaemon longirostris. Drug residues found in coastal waters occur as mixture, and the evaluation of combined effects of simultaneously occurring compounds is indispensable for their environmental risk assessment. All larval stages of P. longirostris were exposed to the nonsteroidal anti-inflammatory drug (NSAID) diclofenac sodium (DS: 40 and 750 μg L(-1)), the lipid regulator clofibric acid (CA: 17 and 361 μg L(-1)) and the fungicide clotrimazole (CLZ: 0.14 and 4 μg L(-1)). We observed no effect on larval survival of P. longirostris with the tested pharmaceuticals. However, and in contrast to previous studies on larvae of the related marine species Palaemon serratus, CA affected development through an increase in intermoult duration and reduced growth without affecting larval body mass. These developmental effects in P. longirostris larvae were similar to those observed in the mixture of DS and CA confirming the toxic effects of CA. In the case of CLZ, its effects were similar to those observed previously in P. serratus: high doses affected development altering intermoult duration, tended to reduce the number of larval instars and decreased significantly the growth rate. This study suggests that an inter-specific life histories approach should be taken into account to assess the effect of emergent compounds in coastal waters. Copyright © 2015 Elsevier B.V. All rights reserved.

Muscle biochemistry of a pelagic delphinid (Stenella longirostris longirostris): insight into fishery-induced separation of mothers and calves.

PubMed

Noren, Shawn R; West, Kristi

2017-04-15

The length of time required for postnatal maturation of the locomotor muscle (longissimus dorsi) biochemistry [myoglobin (Mb) content and buffering capacity] in marine mammals typically varies with nursing duration, but it can be accelerated by species-specific behavioral demands, such as deep-diving and sub-ice transit. We examined how the swimming demands of a pelagic lifestyle influence postnatal maturation of Mb and buffering capacity in spinner dolphins ( Stenella longirostris longirostris ). Mb content of newborn (1.16±0.07 g Mb per 100 g wet muscle mass, n =6) and juvenile (2.77±0.22 g per 100 g, n =4) spinner dolphins were only 19% and 46% of adult levels (6.00±0.74 g per 100 g, n =6), respectively. At birth, buffering capacity was 52.70±4.48 slykes ( n =6) and increased to 78.53±1.91 slykes ( n =6) once a body length of 141 cm was achieved, representing 1.6- to 2.0-year-old dolphins. Based on the age of weaning (1.3-1.6 years post-partum), muscle maturation occurred just after weaning as described for coastal bottlenose dolphins ( Tursiops truncatus ). Thus, a pelagic lifestyle does not promote rapid maturation of muscle biochemistry. Rather, it promotes enhanced muscle biochemistry: newborn and adult spinner dolphins had four- and two-times greater Mb contents than newborn and adult bottlenose dolphins, respectively. Indeed, adult levels rivaled those of deep-diving cetaceans. Nonetheless, the relatively underdeveloped muscle biochemistry of calves likely contributes to documented mother-calf separations for spinner dolphins chased by the tuna purse-seine fishery. © 2017. Published by The Company of Biologists Ltd.

Widespread plant specialization in the polyphagous planthopper Hyalesthes obsoletus (Cixiidae), a major vector of stolbur phytoplasma: Evidence of cryptic speciation.

PubMed

Kosovac, Andrea; Johannesen, Jes; Krstić, Oliver; Mitrović, Milana; Cvrković, Tatjana; Toševski, Ivo; Jović, Jelena

2018-01-01

The stolbur phytoplasma vector Hyalesthes obsoletus is generally considered as a polyphagous species associated with numerous wild and cultivated plants. However, recent research in southeastern Europe, the distribution centre of H. obsoletus and the area of most stolbur-inflicted crop diseases, points toward specific host-plant associations of the vector, indicating specific vector-based transmission routes. Here, we study the specificity of populations associated with four host-plants using mitochondrial and nuclear genetic markers, and we evaluate the evolution of host-shifts in H. obsoletus. Host-plant use was confirmed for Convolvulus arvensis, Urtica dioica, Vitex agnus-castus and Crepis foetida. Mitochondrial genetic analysis showed sympatric occurrence of three phylogenetic lineages that were ecologically delineated by host-plant preference, but were morphologically inseparable. Nuclear data supported the existence of three genetic groups (Evanno's ΔK(3) = 803.72) with average genetic membership probabilities > 90%. While populations associated with C. arvensis and U. dioica form a homogenous group, populations affiliated with V. agnus-castus and C. foetida constitute two independent plant-associated lineages. The geographical signal permeating the surveyed populations indicated complex diversification processes associated with host-plant selection and likely derived from post-glacial refugia in the eastern Mediterranean. This study provides evidence for cryptic species diversification within H. obsoletus sensu lato: i) consistent mitochondrial differentiation (1.1-1.5%) among host-associated populations in syntopy and in geographically distant areas, ii) nuclear genetic variance supporting mitochondrial data, and iii) average mitochondrial genetic distances among host-associated meta-populations are comparable to the most closely related, morphologically distinguishable species, i.e., Hyalesthes thracicus (2.1-3.3%).

Widespread plant specialization in the polyphagous planthopper Hyalesthes obsoletus (Cixiidae), a major vector of stolbur phytoplasma: Evidence of cryptic speciation

PubMed Central

Kosovac, Andrea; Johannesen, Jes; Krstić, Oliver; Cvrković, Tatjana; Toševski, Ivo

2018-01-01

The stolbur phytoplasma vector Hyalesthes obsoletus is generally considered as a polyphagous species associated with numerous wild and cultivated plants. However, recent research in southeastern Europe, the distribution centre of H. obsoletus and the area of most stolbur-inflicted crop diseases, points toward specific host-plant associations of the vector, indicating specific vector-based transmission routes. Here, we study the specificity of populations associated with four host-plants using mitochondrial and nuclear genetic markers, and we evaluate the evolution of host-shifts in H. obsoletus. Host-plant use was confirmed for Convolvulus arvensis, Urtica dioica, Vitex agnus-castus and Crepis foetida. Mitochondrial genetic analysis showed sympatric occurrence of three phylogenetic lineages that were ecologically delineated by host-plant preference, but were morphologically inseparable. Nuclear data supported the existence of three genetic groups (Evanno’s ΔK(3) = 803.72) with average genetic membership probabilities > 90%. While populations associated with C. arvensis and U. dioica form a homogenous group, populations affiliated with V. agnus-castus and C. foetida constitute two independent plant-associated lineages. The geographical signal permeating the surveyed populations indicated complex diversification processes associated with host-plant selection and likely derived from post-glacial refugia in the eastern Mediterranean. This study provides evidence for cryptic species diversification within H. obsoletus sensu lato: i) consistent mitochondrial differentiation (1.1–1.5%) among host-associated populations in syntopy and in geographically distant areas, ii) nuclear genetic variance supporting mitochondrial data, and iii) average mitochondrial genetic distances among host-associated meta-populations are comparable to the most closely related, morphologically distinguishable species, i.e., Hyalesthes thracicus (2.1–3.3%). PMID:29738577

Taxonomic status of certain clapper rails of southwestern United States and northwestern Mexico

USGS Publications Warehouse

Banks, R.C.; Tomlinson, R.E.

1974-01-01

Examination of 58 Clapper Rail specimens taken in the breeding season from the Colorado Valley and the west coast of mainland Mexico verifies the distinctness of the races Rallus longirostris yomanensis, R. 1. rhizophorae, and R. 1. nayaritensis. Rallus 1. yumanensis is a relatively pale brown, pointed-winged, summer resident of freshwater marshes along the valley and delta of the Colorado River. Late winter specimens of yumanensis have been taken in freshwater and saltwater habitats in the Mexican states of Sinaloa and Puebla. Both R. 1. rhizophorae, a pale grayish bird, and R. 1. nayaritensis, a darker grayish form, are presumed year-round residents of the western Mexican mangrove swamps. Both have more rounded wings than yumanensis. The range of rhizophorae extends south along the coast from central Sonora to central Sinaloa, and that of nayaritensis from central Sinaloa to the vicinity of San Blas, Nayarit. Features of the range and characters of birds where the range of these two races approach each other are unclear.

First Comparative Analysis of the Community Structures and Carbon Metabolic Pathways of the Bacteria Associated with Alvinocaris longirostris in a Hydrothermal Vent of Okinawa Trough.

PubMed

Sun, Qing-Lei; Zeng, Zhi-Gang; Chen, Shuai; Sun, Li

2016-01-01

Alvinocaris longirostris is a species of shrimp existing in the hydrothermal fields of Okinawa Trough. To date the structure and function of the microbial community associated with A. longirostris are essentially unknown. In this study, by employment of the techniques of high through-put sequencing and clone library construction and analysis, we compared for the first time the community structures and metabolic profiles of microbes associated with the gill and gut of A. longirostris in a hydrothermal field of Okinawa Trough. Fourteen phyla were detected in the gill and gut communities, of which 11 phyla were shared by both tissues. Proteobacteria made up a substantial proportion in both tissues, while Firmicutes was abundant only in gut. Although gill and gut communities were similar in bacterial diversities, the bacterial community structures in these two tissues were significantly different. Further, we discovered for the first time the existence in the gill and gut communities of A. longirostris the genes (cbbM and aclB) encoding the key enzymes of Calvin-Benson-Bassham (CBB) cycle and the reductive tricarboxylic acid (rTCA) cycle, and that both cbbM and aclB were significantly more abundant in gill than in gut. Taken together, these results provide the first evidence that at least two carbon fixation pathways are present in both the gill and the gut communities of A. longirostris, and that the communities in different tissues likely differ in autotrophic productivity.

Diel variation in detection and vocalization rates of king (Rallus elegans) and clapper (Rallus crepitans) rails in intracoastal waterways

USGS Publications Warehouse

Stiffler, Lydia L.; Anderson, James T.; Welsh, Amy B.; Harding, Sergio R.; Costanzo, Gary R.; Katzner, Todd

2017-01-01

Surveys for secretive marsh birds could be improved with refinements to address regional and species-specific variation in detection probabilities and optimal times of day to survey. Diel variation in relation to naïve occupancy, detection rates, and vocalization rates of King (Rallus elegans) and Clapper (R. crepitans) rails were studied in intracoastal waterways in Virginia, USA. Autonomous acoustic devices recorded vocalizations of King and Clapper rails at 75 locations for 48-hr periods within a marsh complex. Naïve King and Clapper rail occupancy did not vary hourly at either the marsh or the study area level. Combined King and Clapper rail detections and vocalizations varied across marshes, decreased as the sampling season progressed, and, for detections, was greatest during low rising tides (P < 0.01). Hourly variation in vocalization and detection rates did not show a pattern but occurred between 7.8% of pairwise comparisons for detections and 10.5% of pairwise comparisons for vocalizations (P < 0.01). Higher rates of detections and vocalizations occurred during the hours of 00:00–00:59, 05:00–05:59, 14:00–15:59, and lower rates during the hours of 07:00–09:59. Although statistically significant, because there were no patterns in these hourly differences, they may not be biologically relevant and are of little use to management. In fact, these findings demonstrate that surveys for King and Clapper rails in Virginia intracoastal waterways may be effectively conducted throughout the day.

Tidal and seasonal effects on survival rates of the endangered California clapper rail: Does invasive Spartina facilitate greater survival in a dynamic environment?

USGS Publications Warehouse

Overton, Cory T.; Casazza, Michael L.; Takekawa, John Y.; Strong, Donald R.; Holyoak, Marcel

2014-01-01

Invasive species frequently degrade habitats, disturb ecosystem processes, and can increase the likelihood of extinction of imperiled populations. However, novel or enhanced functions provided by invading species may reduce the impact of processes that limit populations. It is important to recognize how invasive species benefit endangered species to determine overall effects on sensitive ecosystems. For example, since the 1990s, hybrid Spartina (Spartina foliosa × alterniflora) has expanded throughout South San Francisco Bay, USA, supplanting native vegetation and invading mudflats. The endangered California clapper rail (Rallus longirostris obsoletus) uses the tall, dense hybrid Spartina for cover and nesting, but the effects of hybrid Spartina on clapper rail survival was unknown. We estimated survival rates of 108 radio-marked California clapper rails in South San Francisco Bay from January 2007 to March 2010, a period of extensive hybrid Spartina eradication, with Kaplan–Meier product limit estimators. Clapper rail survival patterns were consistent with hybrid Spartina providing increased refuge cover from predators during tidal extremes which flood native vegetation, particularly during the winter when the vegetation senesces. Model averaged annual survival rates within hybrid Spartina dominated marshes before eradication (Ŝ = 0.466) were greater than the same marshes posttreatment (Ŝ = 0.275) and a marsh dominated by native vegetation (Ŝ = 0.272). However, models with and without marsh treatment as explanatory factor for survival rates had nearly equivalent support in the observed data, lending ambiguity as to whether hybrid Spartina facilitated greater survival rates than native marshland. Conservation actions to aid in recovery of this endangered species should recognize the importance of available of high tide refugia, particularly in light of invasive species eradication programs and projections of future sea-level rise.

Morphometric discrimination of two sympatric sibling species in the Palaearctic region, Culicoides obsoletus Meigen and C. scoticus Downes & Kettle (Diptera: Ceratopogonidae), vectors of bluetongue and Schmallenberg viruses.

PubMed

Kluiters, G; Pagès, N; Carpenter, S; Gardès, L; Guis, H; Baylis, M; Garros, C

2016-05-04

Some Palaearctic biting midge species (subgenus Avaritia) have been implicated as vectors of bluetongue virus in northern Europe. Separation of two species (C. obsoletus and C. scoticus) is considered difficult morphologically and, often, these female specimens are grouped in entomological studies. However, species-specific identification is desirable to understand their life history characteristics, assess their roles in disease transmission or measure their abundance during arboviral outbreaks. This study aims to investigate whether morphometric identification techniques can be applied to female C. obsoletus and C. scoticus individuals trapped at different geographical regions and time periods during the vector season. C. obsoletus and C. scoticus were collected using light-suction traps from the UK, France and Spain, with two geographical locations sampled per country. A total of 759 C. obsoletus/C. scoticus individuals were identified using a molecular assay based on the cytochrome c oxidase subunit I gene. Fifteen morphometric measurements were taken from the head, wings and abdomen of slide-mounted specimens, and ratios calculated between these measurements. Multivariate analyses explored whether a combination of morphometric variables could lead to accurate species identification. Finally, Culicoides spp. collected in France at the start, middle and end of the adult vector season were compared, to determine whether seasonal variation exists in any of the morphometric measurements. The principal component analyses revealed that abdominal characteristics: length and width of the smaller and larger spermathecae, and the length of the chitinous plates and width between them, are the most reliable morphometric characteristics to differentiate between the species. Seasonal variation in the size of each species was observed for head and wing measurements, but not abdominal measurements. Geographical variation in the size of Culicoides spp. was also observed and is

Allergen-Specific Cytokine Polarization Protects Shetland Ponies against Culicoides obsoletus-Induced Insect Bite Hypersensitivity

PubMed Central

Meulenbroeks, Chantal; van der Lugt, Jaco J.; van der Meide, Nathalie M. A.; Willemse, Ton; Rutten, Victor P. M. G.; Zaiss, Dietmar M. W.

2015-01-01

The immunological mechanisms explaining development of an allergy in some individuals and not in others remain incompletely understood. Insect bite hypersensitivity (IBH) is a common, seasonal, IgE-mediated, pruritic skin disorder that affects considerable proportions of horses of different breeds, which is caused by bites of the insect Culicoides obsoletus (C. obsoletus). We investigated the allergen-specific immune status of individual horses that had either been diagnosed to be healthy or to suffer of IBH. Following intradermal allergen injection, skin biopsies were taken of IBH-affected and healthy ponies and cytokine expression was determined by RT-PCR. In addition, allergen-specific antibody titers were measured and cytokine expression of in vitro stimulated, allergen-specific CD4 T-cells was determined. 24 hrs after allergen injection, a significant increase in mRNA expression of the type-2 cytokine IL-4 was observed in the skin of IBH-affected Shetland ponies. In the skin of healthy ponies, however, an increase in IFNγ mRNA expression was found. Analysis of allergen-specific antibody titers revealed that all animals produced allergen-specific antibodies, and allergen-specific stimulation of CD4 T-cells revealed a significant higher percentage of IFNγ-expressing CD4 T-cells in healthy ponies compared to IBH-affected ponies. These data indicate that horses not affected by IBH, in contrast to the so far established dogma, are not immunologically ignorant but have a Th1-skewed allergen-specific immune response that appears to protect against IBH-associated symptoms. To our knowledge this is the first demonstration of a natural situation, in which an allergen-specific immune skewing is protective in an allergic disorder. PMID:25901733

Bluetongue Disease Risk Assessment Based on Observed and Projected Culicoides obsoletus spp. Vector Densities

PubMed Central

Brugger, Katharina; Rubel, Franz

2013-01-01

Bluetongue is an arboviral disease of ruminants causing significant economic losses. Our risk assessment is based on the epidemiological key parameter, the basic reproduction number. It is defined as the number of secondary cases caused by one primary case in a fully susceptible host population, in which values greater than one indicate the possibility, i.e., the risk, for a major disease outbreak. In the course of the Bluetongue virus serotype 8 (BTV-8) outbreak in Europe in 2006 we developed such a risk assessment for the University of Veterinary Medicine Vienna, Austria. Basic reproduction numbers were calculated using a well-known formula for vector-borne diseases considering the population densities of hosts (cattle and small ruminants) and vectors (biting midges of the Culicoides obsoletus spp.) as well as temperature dependent rates. The latter comprise the biting and mortality rate of midges as well as the reciprocal of the extrinsic incubation period. Most important, but generally unknown, is the spatio-temporal distribution of the vector density. Therefore, we established a continuously operating daily monitoring to quantify the seasonal cycle of the vector population by a statistical model. We used cross-correlation maps and Poisson regression to describe vector densities by environmental temperature and precipitation. Our results comprise time series of observed and simulated Culicoides obsoletus spp. counts as well as basic reproduction numbers for the period 2009–2011. For a spatio-temporal risk assessment we projected our results from the location of Vienna to the entire region of Austria. We compiled both daily maps of vector densities and the basic reproduction numbers, respectively. Basic reproduction numbers above one were generally found between June and August except in the mountainous regions of the Alps. The highest values coincide with the locations of confirmed BTV cases. PMID:23560090

Avian communities in tidal salt marshes of San Francisco Bay: a review of functional groups by foraging guild and habitat association

USGS Publications Warehouse

Takekawa, John Y.; Woo, Isa; Gardiner, Rachel J.; Casazza, Michael L.; Ackerman, Joshua T.; Nur, Nadav; Liu, Leonard; Spautz, Hildie; Palaima, Arnas

2011-01-01

The San Francisco Bay estuary is highly urbanized, but it supports the largest remaining extent of tidal salt marshes on the west coast of North America as well as a diverse native bird community. San Francisco Bay tidal marshes are occupied by more than 113 bird species that represent 31 families, including five subspecies from three families that we denote as tidal-marsh obligates. To better identify the niche of bird species in tidal marshes, we present a review of functional groups based on foraging guilds and habitat associations. Foraging guilds describe the method by which species obtain food from tidal marshes, while habitat associations describe broad areas within the marsh that have similar environmental conditions. For example, the ubiquitous song sparrows (Alameda Melospiza melodia pusillula, Suisun M. m. maxillaris, and San Pablo M. m. samuelis) are surface-feeding generalists that consume prey from vegetation and the ground, and they are found across the entire marsh plain into the upland–marsh transition. In contrast, surface-feeding California black rails (Laterallus jamaicensis coturniculus) are cryptic, and generally restricted in their distribution to the mid- and high-marsh plain. Although in the same family, the endangered California clapper rail (Rallus longirostris obsoletus) has become highly specialized, foraging primarily on benthic fauna within marsh channels when they are exposed at low tide. Shorebirds such as the black-necked stilt (Himantopus mexicanus) typically probe in mud flats to consume macroinvertebrate prey, and are generally restricted to foraging on salt pans within the marsh plain, in ponds, or on mud flats during transitional stages of marsh evolution. The abundance and distribution of birds varies widely with changing water depths and vegetation colonization during different stages of restoration. Thus, tidal-marsh birds represent a rich and diverse community in bay marshes, with niches that may be distinguished by the

Concentrations and time trends of polybrominated diphenyl ethers (PBDEs) and polychlorinated biphenyls (PCBs) in aquatic bird eggs from San Francisco Bay, CA 2000-2003.

PubMed

She, Jianwen; Holden, Arthur; Adelsbach, Terrence L; Tanner, Manon; Schwarzbach, Steven E; Yee, Julie L; Hooper, Kim

2008-08-01

Concentrations of polybrominated diphenyl ethers (PBDEs) and polychlorinated biphenyls (PCBs) were measured in 169 avian eggs. We analyzed randomly collected eggs of two species of piscivorous birds: Caspian tern (Sterna caspia) (n=78) and Forster's tern (Sterna forsteri) (n=76). We also analyzed fail-to-hatch eggs from two species protected under the Federal Endangered Species Act of 1973, that breed in the San Francisco Bay region: the piscivorous California Least tern (Sterna antillarum brownii) (n=11) and the omnivorous California Clapper rail (Rallus longirostris obsoletus) (n=4). San Francisco Bay eggs were collected annually for four years (2000-2003), and additional 20 eggs were collected and analyzed from Gray's Harbor, Washington in 2001. Geometric mean PBDE concentrations did not significantly differ in the three tern species, but concentrations in eggs from the fail to hatch California Clapper rail eggs were significantly lower than those found in the randomly collected tern eggs. Median concentrations of SigmaPBDEs in Caspian tern eggs for 2000-2003 were 2410, 4730, 3720 and 2880 ng/g lipid weight (lw), respectively, in Forster's terns 1820, 4380, 5460 and 3600 ng/g lw, respectively, and in California Least terns for 2001 and 2002 were 5060 and 5170 ng/g lw, respectively. In contrast, median SigmaPBDEs concentration in California Clapper rail eggs for 2001 was 379 ng/g lw. Five PBDEs were the major congeners found and decreased in the order BDE-47, -99, -100, -153, and -154. BDE-32, -28, -71, -66, -85, -183 were less prevalent, minor congeners, as was BDE-209, which was measured in a subset of samples. PBDE concentrations in bird eggs from San Francisco Bay were site related. There was no significant difference in PBDE concentrations in Caspian tern eggs from San Francisco Bay and Gray's Harbor, WA. Average PBDE concentrations in eggs did not significantly increase over the period 2000-2003.

Concentrations and time trends of polybrominated diphenyl ethers (PBDEs) and polychlorinated biphenyls (PCBs) in aquatic bird eggs from San Francisco Bay, CA 2000-2003

USGS Publications Warehouse

She, J.; Holden, A.; Adelsbach, T.L.; Tanner, M.; Schwarzbach, S.E.; Yee, J.L.; Hooper, K.

2008-01-01

Concentrations of polybrominated diphenyl ethers (PBDEs) and polychlorinated biphenyls (PCBs) were measured in 169 avian eggs. We analyzed randomly collected eggs of two species of piscivorous birds: Caspian tern (Sterna caspia) (n = 78) and Forster's tern (Sterna forsteri) (n = 76). We also analyzed fail-to-hatch eggs from two species protected under the Federal Endangered Species Act of 1973, that breed in the San Francisco Bay region: the piscivorous California Least tern (Sterna antillarum brownii) (n = 11) and the omnivorous California Clapper rail (Rallus longirostris obsoletus) (n = 4). San Francisco Bay eggs were collected annually for four years (2000-2003), and additional 20 eggs were collected and analyzed from Gray's Harbor, Washington in 2001. Geometric mean PBDE concentrations did not significantly differ in the three tern species, but concentrations in eggs from the fail to hatch California Clapper rail eggs were significantly lower than those found in the randomly collected tern eggs. Median concentrations of ???PBDEs in Caspian tern eggs for 2000-2003 were 2410, 4730, 3720 and 2880 ng/g lipid weight (lw), respectively, in Forster's terns 1820, 4380, 5460 and 3600 ng/g lw, respectively, and in California Least terns for 2001 and 2002 were 5060 and 5170 ng/g lw, respectively. In contrast, median ???PBDEs concentration in California Clapper rail eggs for 2001 was 379 ng/g lw. Five PBDEs were the major congeners found and decreased in the order BDE-47, -99, -100, -153, and -154. BDE-32, -28, -71, -66, -85, -183 were less prevalent, minor congeners, as was BDE-209, which was measured in a subset of samples. PBDE concentrations in bird eggs from San Francisco Bay were site related. There was no significant difference in PBDE concentrations in Caspian tern eggs from San Francisco Bay and Gray's Harbor, WA. Average PBDE concentrations in eggs did not significantly increase over the period 2000-2003. ?? 2008 Elsevier Ltd. All rights reserved.

75 FR 6697 - Endangered and Threatened Wildlife and Plants; Draft Yuma Clapper Rail (Rallus longirostris...

Federal Register 2010, 2011, 2012, 2013, 2014

2010-02-10

...-term contracts for water supplies at Sonny Bono Salton Sea National Wildlife Refuge and Imperial State... species is completed and protective measures implemented if needed; and a secure water supply for the..., directed research on habitat and threats, efforts to obtain secure water supplies for important habitats...

Modelling the distributions and spatial coincidence of bluetongue vectors Culicoides imicola and the Culicoides obsoletus group throughout the Iberian peninsula.

PubMed

Calvete, C; Estrada, R; Miranda, M A; Borrás, D; Calvo, J H; Lucientes, J

2008-06-01

Data obtained by a Spanish national surveillance programme in 2005 were used to develop climatic models for predictions of the distribution of the bluetongue virus (BTV) vectors Culicoides imicola Kieffer (Diptera: Ceratopogonidae) and the Culicoides obsoletus group Meigen throughout the Iberian peninsula. Models were generated using logistic regression to predict the probability of species occurrence at an 8-km spatial resolution. Predictor variables included the annual mean values and seasonalities of a remotely sensed normalized difference vegetation index (NDVI), a sun index, interpolated precipitation and temperature. Using an information-theoretic paradigm based on Akaike's criterion, a set of best models accounting for 95% of model selection certainty were selected and used to generate an average predictive model for each vector. The predictive performances (i.e. the discrimination capacity and calibration) of the average models were evaluated by both internal and external validation. External validation was achieved by comparing average model predictions with surveillance programme data obtained in 2004 and 2006. The discriminatory capacity of both models was found to be reasonably high. The estimated areas under the receiver operating characteristic (ROC) curve (AUC) were 0.78 and 0.70 for the C. imicola and C. obsoletus group models, respectively, in external validation, and 0.81 and 0.75, respectively, in internal validation. The predictions of both models were in close agreement with the observed distribution patterns of both vectors. Both models, however, showed a systematic bias in their predicted probability of occurrence: observed occurrence was systematically overestimated for C. imicola and underestimated for the C. obsoletus group. Average models were used to determine the areas of spatial coincidence of the two vectors. Although their spatial distributions were highly complementary, areas of spatial coincidence were identified, mainly in

Laboratory survival and blood feeding response of wild-caught Culicoides obsoletus Complex (Diptera: Ceratopogonidae) through natural and artificial membranes.

PubMed

Goffredo, M; Romeo, G; Monaco, F; Di Gennaro, A; Savini, G

2004-01-01

In late summer 2002, live wild-caught midges of the Obsoletus Complex were collected using blacklight traps placed at a horse stable in Teramo (Abruzzo, Italy). For the survival study under laboratory conditions, 1,500 Obsoletus Complex midges were kept at 17 degrees C-25 degrees C and provided only with a sucrose solution. Of these, 150 (10%) survived for at least 40 days and 3 midges were still alive after 92 days. In addition, 10 midges survived 10 days at 4 degrees C. For the feeding trials, 40 blood-meals (9,440 midges) were administered, 27 of which were successful (67.5%); the feeding rate ranged from 0.3% to 16.7%, with a total of 592 engorged midges. Similar feeding rates (U Mann-Whitney test=129.5 p>0.05) were obtained when natural (day-old chicken skin) and artificial (stretched parafilm) membranes were used. To infect the insects, a field strain of bluetongue (BT) virus (BTV) serotype 2 isolated from the spleen of a sheep during the 2000 Italian outbreak was added to the blood-meal. Two different viral solutions, with titres of 10(6)TCID(50)/ml and 10(7)TCID(50)/ml, were prepared. Uninfected blood was significantly more appetising (U Mann-Whitney test=88.5 p<0.05) than the infected meal and the midges preferred (U Mann-Whitney test=48 p<0.05) to feed on blood containing BTV-2 at a lower titre. A total of 251 midges were fed on BTV-2 infected blood and were then incubated at 23 degrees C-25 degrees C and fed with a sucrose solution for 10 days. During the incubation period, the dead insects were collected daily and analysed for evidence of virus infection. Of the 251 engorged midges, 54 (21.5%) died in the feeding chambers or during sorting on the chill table, 136 died within the first 10 days and 61 survived longer. BTV was isolated only from those which died just after feeding (52.6%; 10/19) or 24 h later (47.8%; 11/23). Considering the small number of midges tested after 10 days of incubation, the prevalence of infection detected in this study (95

The light-footed clapper rail: An update

USGS Publications Warehouse

Wilburn, Cynthia A.; Jorgensen, Paul D.; Massey, Barbara W.; Basham, Venita A.

1979-01-01

A preliminary report on the Light-footed Clapper Rail, Rallus longirostris levipes, estimated a population of 500-750 birds in California (Wilbur, Am. Birds 28:868-870, 1974). Since then, additional work has been accomplished, most notably: (1) an intensive study of Carpinteria Marsh, Santa Barbara County, 1976-1977 (Basham); (2) a series of winter high tide counts at Anaheim Bay, Orange County, 1975-1977 (Massey, C. Collins, J. Lindell, M. Silbernagle); and (3) a detailed investigation of the rail population of Tijuana Slough, San Diego County, 1973-1974 (Jorgensen). These, plus short-term studies by the authors and K. Bender, D. Pinkler, P. Johns, and S. Lockhart, have shown that the original estimate was unrealistic. A more probable winter total is 300 rails, distributed as described below.

Environmental extremes and biotic interactions facilitate depredation of endangered California Ridgway’s rail in a San Francisco Bay tidal marsh

USGS Publications Warehouse

Overton, Cory T.; Bobzien, Steven; Grefsrud, Marcia

2016-01-01

On 23 December 2015 while performing a high tide population survey for endangered Ridgway’s rails (Rallus obsoletus obsoletus; formerly known as the California clapper rail) and other rail species at Arrowhead Marsh, Martin Luther King Jr. Regional Shoreline, Oakland, California, the authors observed a series of species interactions resulting in the predation of a Ridgway’s rail by an adult female peregrine falcon (Falco peregrinus). High tide surveys are performed during the highest tides of the year when tidal marsh vegetation at Arrowhead Marsh becomes inundated, concentrating the tidal marsh obligate species into the limited area of emergent vegetation remaining as refuge cover. Annual mean tide level (elevation referenced relative to mean lower low water) at Arrowhead Marsh is 1.10 m, mean higher high water is 2.04 m (NOAA National Ocean Service 2014) and the average elevation of the marsh surface is 1.60 m (Overton et al. 2014). Tidal conditions on the day of the survey were predicted to be 2.42 m. Observed tides at the nearby Alameda Island tide gauge were 8 cm higher than predicted due to a regional low-pressure system and warmer than average sea surface temperatures (NOAA National Ocean Service 2014). The approximately 80 cm deep inundation of the marsh plain was sufficient to completely submerge tidal marsh vegetation and effectively remove 90% of refugia habitats.

Adaptation to the deep-sea hydrothermal vents and cold seeps: Insights from the transcriptomes of Alvinocaris longirostris in both environments

NASA Astrophysics Data System (ADS)

Hui, Min; Cheng, Jiao; Sha, Zhongli

2018-05-01

Alvinocaris longirostris Kikuchi and Ohta, 1995 is one of the few species co-distributed in deep-sea hydrothermal vent and cold seep environments. We performed the transcriptome analysis for A. longirostris and identified differentially expressed genes (DEGs) between samples from the Iheya North hydrothermal vent (HV) and a methane seep in the South China Sea (MS). From the 57,801 annotated unigenes, multi-copies of enzyme family members for eliminating toxic xenobiotics were isolated and seven putatively duplicated gene clusters of cytochrome P450s were discovered, which may contribute to adaptation to the harsh conditions. Eight single amino acid substitutions of a Rhodopsin gene with low expression in two deep-sea alvinocaridid species were positively selected when compared with shallow water shrimps, which may be the result of adaptation to the dim-light environment in deep sea. 408 DEGs were identified with 53 and 355 up-regulated in HV and MS, respectively. Various genes associated with sulfur metabolism, detoxification and mitochondria were included, revealing different mechanisms of adaptation to the two types of extreme environments. All results are expected to serve as important basis for the further study.

Parapenaeus longirostris (Lucas, 1846) an early warning indicator species of global warming in the central Mediterranean Sea

NASA Astrophysics Data System (ADS)

Colloca, Francesco; Mastrantonio, Gianluca; Lasinio, Giovanna Jona; Ligas, Alessandro; Sartor, Paolo

2014-10-01

The effect of temperature increase on the stock of the deep-sea pink shrimp (Parapenaeus longirostris) was analysed along the western coasts of Italy (North Tyrrhenian-Ligurian Sea: Geographical Sub-Area 9). This crustacean is currently one of the most important commercial species of the trawl fisheries in the Mediterranean Sea. Landings of the species in the North Tyrrhenian-Ligurian Sea have grown consistently during the last years following a rapid increase in the stock size. Since the deep-sea pink shrimp stock is exploited on the same fishing ground of other heavily overexploited stocks in a full mixed and poorly selective fishery, its condition seems to be largely independent of the current fishing exploitation pattern suggesting a positive role of climate change on the dynamic of the stock. To test this hypothesis we investigated the effect of sea surface temperature (SST) on density and distribution of P. longirostris by means of general additive models (GAMs). Two different models were developed for the whole stock and for the recruits (CL < 20 mm) using time series of MEDITS (International bottom trawl survey in the Mediterranean) survey density indices (n km- 2) covering the period 1995-2010. Predictors included were geographical coordinates, quarterly averaged minimum SST, sampling depth and year. Spawners density was included as predictor into the GAM for recruits. The best GAM for the whole stock explained 67.1% of the total deviance, showing a clear increase in density in concomitance with the expansion of the stock northward. We found a significant positive effect of the min SST of all seasons, as expected considering that P. longirostris spawn all year round, with the highest influence played by summer min SST, either in the same or previous year. The best model for recruits explained 64.9% of the total deviance. Recruitment increased linearly with the density of spawners showing a positive temporal trend and an expansion northward. The observed

Summary of intrinsic and extrinsic factors affecting detection probability of marsh birds

USGS Publications Warehouse

Conway, C.J.; Gibbs, J.P.

2011-01-01

Many species of marsh birds (rails, bitterns, grebes, etc.) rely exclusively on emergent marsh vegetation for all phases of their life cycle, and many organizations have become concerned about the status and persistence of this group of birds. Yet, marsh birds are notoriously difficult to monitor due to their secretive habits. We synthesized the published and unpublished literature and summarized the factors that influence detection probability of secretive marsh birds in North America. Marsh birds are more likely to respond to conspecific than heterospecific calls, and seasonal peak in vocalization probability varies among co-existing species. The effectiveness of morning versus evening surveys varies among species and locations. Vocalization probability appears to be positively correlated with density in breeding Virginia Rails (Rallus limicola), Soras (Porzana carolina), and Clapper Rails (Rallus longirostris). Movement of birds toward the broadcast source creates biases when using count data from callbroadcast surveys to estimate population density. Ambient temperature, wind speed, cloud cover, and moon phase affected detection probability in some, but not all, studies. Better estimates of detection probability are needed. We provide recommendations that would help improve future marsh bird survey efforts and a list of 14 priority information and research needs that represent gaps in our current knowledge where future resources are best directed. ?? Society of Wetland Scientists 2011.

The toxicity of p,p'-DDT to the clapper rail

USGS Publications Warehouse

Van Velzen, A.; Kreitzer, J.F.

1975-01-01

The LC50 (concentration of toxicant in the diet expected to kill half of the test birds in 5 days) for p,p' -DDT in clapper rails (Rallus longirostris) was found to be 1,612 ppm for males and 1,896 ppm for females. Amounts of DDT + DDD in the brains of birds that died were significantly greater (P < 0.01) than those in the brains of survivors. Thirty ppm DDT + DDD approximated the lower limit of these compounds in the brains of rails diagnostic of death from DDT poisoning. Residues in livers and carcasses are reported. Considering the relatively high resistance of the clapper rail to DDT poisoning, we concluded that exposure to this pesticide in marshes is not likely to be a significant factor in mortality of adult rails. Effects other than direct mortality were not evaluated in this study.

Lessons from the past: isotopes of an endangered rail as indicators of underlying change to tidal marsh habitats

USGS Publications Warehouse

Merritt, Angela M.; Casazza, Michael L.; Overton, Cory T.; Takekawa, John Y.; Hahn, Thomas P.; Hull, Joshua M.

2017-01-01

Introduction: Tidal marsh systems along the Pacific coast of the United States have experienced substantial stress and loss of area and ecosystem function, which we examined by using the endangered California Ridgway’s Rail, Rallus obsoletus obsoletus (‘rail’) as an indicator of its tidal marsh habitat in the San Francisco Estuary. We organized a collection of historical (1885-1940) and modern (2005-2014) rail feathers and analyzed the feather isotope means for delta carbon (δ13C), sulfur (δ34S), and nitrogen (δ15N) by region and time period.Outcomes: Feather isotopes represented the primary foraging habitat during historical then modern time periods. Neither individual nor regional rail feather isotopes suggested freshwater or terrestrial foraging by the rail. Three regions with both historic and modern feather isotopes revealed non-uniform spatial shifts in isotope levels consistent with a marine based food web and significant δ15N enrichment.Discussion: Our results supported the rail’s status as a generalist forager and obligate tidal marsh species throughout the historic record. The variable isoscape trends generated from feather isotope means illustrated a modern loss of the isotopic homogeneity between regions of historical tidal marsh, which correlated with spatially-explicit habitat alterations such as increasing biological invasions and sewage effluent over time.Conclusion: These findings have reinforced the importance of tidal marsh conservation in the face of ongoing underlying changes to these important ecosystems.

Influence of environment and climate on occurrence of the cixiid planthopper Hyalesthes obsoletus, the vector of the grapevine disease 'bois noir'.

PubMed

Panassiti, Bernd; Breuer, Michael; Marquardt, Stacey; Biedermann, Robert

2013-12-01

Species distribution models (SDMs), which are well established in many fields of biological research, are still uncommon in the agricultural risk analysis of pest insects. To exemplify the use of SDMs, we investigated the influence of environmental factors on the occurrence of Hyalesthes obsoletus Signoret (Hemiptera: Cixiidae). The planthopper is the only known vector of the grapevine yellows disease 'bois noir'. The study was conducted in 145 locations in the Baden region of southwest Germany. The planthopper was surveyed on host plant patches, consisting of stinging nettle and/or bindweeds. We used a stratified modelling framework where (1) species presence-absence data were related to an extensive environmental dataset using logistic regressions; and (2) different types of average models were developed based on an information theoretic method. The results show that the incidence of H. obsoletus is associated to above- as well as below-ground environmental factors, particularly to the amount of fine soil and average annual precipitation. This result was consistent across all average models. The relative importance of other environmental variables was dependent upon the average model under consideration and thus may vary according to their intended use, either the explanation of habitat requirements or the prediction and mapping of occurrence risks. The study showed that SDMs offer a quantification of species' habitat requirements and thus, could represent a valuable tool for pest management purposes. By providing examples of current issues of grapevine pests in viticulture, we discuss the use of SDMs in agricultural risk analysis and highlight their advantages and caveats.

A New 13 Million Year Old Gavialoid Crocodylian from Proto-Amazonian Mega-Wetlands Reveals Parallel Evolutionary Trends in Skull Shape Linked to Longirostry.

PubMed

Salas-Gismondi, Rodolfo; Flynn, John J; Baby, Patrice; Tejada-Lara, Julia V; Claude, Julien; Antoine, Pierre-Olivier

2016-01-01

Gavialoid crocodylians are the archetypal longirostrine archosaurs and, as such, understanding their patterns of evolution is fundamental to recognizing cranial rearrangements and reconstructing adaptive pathways associated with elongation of the rostrum (longirostry). The living Indian gharial Gavialis gangeticus is the sole survivor of the group, thus providing unique evidence on the distinctive biology of its fossil kin. Yet phylogenetic relationships and evolutionary ecology spanning ~70 million-years of longirostrine crocodylian diversification remain unclear. Analysis of cranial anatomy of a new proto-Amazonian gavialoid, Gryposuchus pachakamue sp. nov., from the Miocene lakes and swamps of the Pebas Mega-Wetland System reveals that acquisition of both widely separated and protruding eyes (telescoped orbits) and riverine ecology within South American and Indian gavialoids is the result of parallel evolution. Phylogenetic and morphometric analyses show that, in association with longirostry, circumorbital bone configuration can evolve rapidly for coping with trends in environmental conditions and may reflect shifts in feeding strategy. Our results support a long-term radiation of the South American forms, with taxa occupying either extreme of the gavialoid morphospace showing preferences for coastal marine versus fluvial environments. The early biogeographic history of South American gavialoids was strongly linked to the northward drainage system connecting proto-Amazonian wetlands to the Caribbean region.

A New 13 Million Year Old Gavialoid Crocodylian from Proto-Amazonian Mega-Wetlands Reveals Parallel Evolutionary Trends in Skull Shape Linked to Longirostry

PubMed Central

Salas-Gismondi, Rodolfo; Flynn, John J.; Baby, Patrice; Tejada-Lara, Julia V.; Claude, Julien; Antoine, Pierre-Olivier

2016-01-01

Gavialoid crocodylians are the archetypal longirostrine archosaurs and, as such, understanding their patterns of evolution is fundamental to recognizing cranial rearrangements and reconstructing adaptive pathways associated with elongation of the rostrum (longirostry). The living Indian gharial Gavialis gangeticus is the sole survivor of the group, thus providing unique evidence on the distinctive biology of its fossil kin. Yet phylogenetic relationships and evolutionary ecology spanning ~70 million-years of longirostrine crocodylian diversification remain unclear. Analysis of cranial anatomy of a new proto-Amazonian gavialoid, Gryposuchus pachakamue sp. nov., from the Miocene lakes and swamps of the Pebas Mega-Wetland System reveals that acquisition of both widely separated and protruding eyes (telescoped orbits) and riverine ecology within South American and Indian gavialoids is the result of parallel evolution. Phylogenetic and morphometric analyses show that, in association with longirostry, circumorbital bone configuration can evolve rapidly for coping with trends in environmental conditions and may reflect shifts in feeding strategy. Our results support a long-term radiation of the South American forms, with taxa occupying either extreme of the gavialoid morphospace showing preferences for coastal marine versus fluvial environments. The early biogeographic history of South American gavialoids was strongly linked to the northward drainage system connecting proto-Amazonian wetlands to the Caribbean region. PMID:27097031

Gene flow connects coastal populations of a habitat specialist, the Clapper Rail Rallus crepitans

USGS Publications Warehouse

Coster, Stephanie S.; Welsh, Amy B.; Costanzo, Gary R.; Harding, Sergio R.; Anderson, James T.; Katzner, Todd

2018-01-01

Examining population genetic structure can reveal patterns of reproductive isolation or population mixing and inform conservation management. Some avian species are predicted to exhibit minimal genetic differentiation among populations as a result of the species high mobility, with habitat specialists tending to show greater fine‐scale genetic structure. To explore the relationship between habitat specialization and gene flow, we investigated the genetic structure of a saltmarsh specialist with high potential mobility across a wide geographic range of fragmented habitat. Little variation among mitochondrial sequences (620 bp from ND2) was observed among 149 individual Clapper Rails Rallus crepitans sampled along the Atlantic coast of North America, with the majority of individuals at all sampling sites sharing a single haplotype. Genotyping of nine microsatellite loci across 136 individuals revealed moderate genetic diversity, no evidence of bottlenecks, and a weak pattern of genetic differentiation that increased with geographic distance. Multivariate analyses, Bayesian clustering and an AMOVA all suggested a lack of genetic structuring across the North American Atlantic coast, with all individuals grouped into a single interbreeding population. Spatial autocorrelation analyses showed evidence of weak female philopatry and a lack of male philopatry. We conclude that high gene flow connecting populations of this habitat specialist may result from the interaction of ecological and behavioral factors that promote dispersal and limit natal philopatry and breeding‐site fidelity. As climate change threatens saltmarshes, the genetic diversity and population connectivity of Clapper Rails may promote resilience of their populations. This finding helps inform about potential fates of other similarly behaving saltmarsh specialists on the Atlantic coast.

Movements of radio-marked California Ridgway's rails during monitoring surveys: Implications for population monitoring

USGS Publications Warehouse

Bui, Thuy-Vy D.; Takekawa, John Y.; Overton, Cory T.; Schultz, Emily R.; Hull, Joshua M.; Casazza, Michael L.

2015-01-01

The California Ridgway's rail Rallus obsoletus obsoletus (hereafter California rail) is a secretive marsh bird endemic to tidal marshes in the San Francisco Bay (hereafter bay) of California. The California rail has undergone significant range contraction and population declines due to a variety of factors, including predation and the degradation and loss of habitat. Call-count surveys, which include call playbacks, based on the standardized North American marsh bird monitoring protocol have been conducted throughout the bay since 2005 to monitor population size and distribution of the California rail. However, call-count surveys are difficult to evaluate for efficacy or accuracy. To measure the accuracy of call-count surveys and investigate whether radio-marked California rails moved in response to call-count surveys, we compared locations of radio-marked California rails collected at frequent intervals (15 min) to California rail detections recorded during call-count surveys conducted over the same time periods. Overall, 60% of radio-marked California rails within 200 m of observers were not detected during call-count surveys. Movements of radio-marked California rails showed no directional bias (P = 0.92) irrespective of whether or not playbacks of five marsh bird species (including the California rail) were broadcast from listening stations. Our findings suggest that playbacks of rail vocalizations do not consistently influence California rail movements during surveys. However, call-count surveys may underestimate California rail presence; therefore, caution should be used when relating raw numbers of call-count detections to population abundance.

Distribution and abundance of the Yuma clapper rail (Rallus longirostris yumanensis) in the Colorado River delta, México

USGS Publications Warehouse

Hinojosa-Huerta, Osvel; DeStefano, Stephen; Shaw, William W.

2001-01-01

We estimated the abundance of Yuma clapper rails in the Ciénega de Santa Clara and determined the distribution of the subspecies in the Colorado River delta region in México. The maximum estimate of abundance was 6629 individuals (95% C.I. 4859–8399), assuming a response rate by rails to taped calls of 60%. Rails were widely distributed in the delta, occupying almost all marshlands dominated by cattail. As this is an endangered subspecies shared by México and the U.S., the conservation of the delta ecosystem should be the interest of both countries, especially when water management decisions upstream in the U.S. have an impact over natural areas downstream in México.

Microhabitat selection, demography, and correlates of home range size for the King Rail (Rallus elegans)

USGS Publications Warehouse

Pickens, Bradley A.; King, Sammy L.

2013-01-01

Animal movements and habitat selection within the home range, or microhabitat selection, can provide insights into habitat requirements, such as foraging and area requirements. The King Rail (Rallus elegans) is a wetland bird of high conservation concern in the United States, but little is known about its movements, habitats, or demography. King Rails (n = 34) were captured during the 2010–2011 breeding seasons in the coastal marshes of southwest Louisiana and southeast Texas. Radio telemetry and direct habitat surveys of King Rail locations were conducted to estimate home ranges and microhabitat selection. Within home ranges, King Rails selected for greater plant species richness and comparatively greater coverage of Phragmites australis, Typha spp., and Schoenoplectus robustus. King Rails were found closer to open water compared to random locations placed 50 m from King Rail locations. Home ranges (n = 22) varied from 0.8–32.8 ha and differed greatly among sites. Home range size did not vary by year or sex; however, increased open water, with a maximum of 29% observed in the study, was correlated with smaller home ranges. Breeding season cumulative survivorship was 89% ± 22% in 2010 and 61% ± 43% in 2011, which coincided with a drought. With an equal search effort, King Rail chicks and juveniles observed in May-June decreased from 110 in 2010 to only 16 in the drier year of 2011. The findings show King Rail used marsh with ≤ 29% open water and had smaller home ranges when open water was more abundant.

Sea-level rise and refuge habitats for tidal marsh species: can artificial islands save the California Ridgway's rail?

USGS Publications Warehouse

Overton, Cory T.; Takekawa, John Y.; Casazza, Michael L.; Bui, Thuy-Vy D.; Holyoak, Marcel; Strong, Donald R.

2014-01-01

Terrestrial species living in intertidal habitats experience refuge limitation during periods of tidal inundation, which may be exacerbated by seasonal variation in vegetation structure, tidal cycles, and land-use change. Sea-level rise projections indicate the severity of refuge limitation may increase. Artificial habitats that provide escape cover during tidal inundation have been proposed as a temporary solution to alleviate these limitations. We tested for evidence of refuge habitat limitation in a population of endangered California Ridgway's rail (Rallus obsoletus obsoletus; hereafter California rail) through use of artificial floating island habitats provided during two winters. Previous studies demonstrated that California rail mortality was especially high during the winter and periods of increased tidal inundation, suggesting that tidal refuge habitat is critical to survival. In our study, California rail regularly used artificial islands during higher tides and daylight hours. When tide levels inundated the marsh plain, use of artificial islands was at least 300 times more frequent than would be expected if California rails used artificial habitats proportional to their availability (0.016%). Probability of use varied among islands, and low levels of use were observed at night. These patterns may result from anti-predator behaviors and heterogeneity in either rail density or availability of natural refuges. Endemic saltmarsh species are increasingly at risk from habitat change resulting from sea-level rise and development of adjacent uplands. Escape cover during tidal inundation may need to be supplemented if species are to survive. Artificial habitats may provide effective short-term mitigation for habitat change and sea-level rise in tidal marsh environments, particularly for conservation-reliant species such as California rails.

Endangered species management and ecosystem restoration: Finding the common ground

USGS Publications Warehouse

Casazza, Michael L.; Overton, Cory T.; Bui, Thuy-Vy D.; Hull, Joshua M.; Albertson, Joy D.; Bloom, Valary K.; Bobzien, Steven; McBroom, Jennifer; Latta, Marilyn; Olofson, Peggy; Rohmer, Tobias M.; Schwarzbach, Steven E.; Strong, Donald R.; Grijalva, Erik; Wood, Julian K.; Skalos, Shannon; Takekawa, John Y.

2016-01-01

Management actions to protect endangered species and conserve ecosystem function may not always be in precise alignment. Efforts to recover the California Ridgway’s Rail (Rallus obsoletus obsoletus; hereafter, California rail), a federally and state-listed species, and restoration of tidal marsh ecosystems in the San Francisco Bay estuary provide a prime example of habitat restoration that has conflicted with species conservation. On the brink of extinction from habitat loss and degradation, and non-native predators in the 1990s, California rail populations responded positively to introduction of a non-native plant, Atlantic cordgrass (Spartina alterniflora). California rail populations were in substantial decline when the non-native Spartina was initially introduced as part of efforts to recover tidal marshes. Subsequent hybridization with the native Pacific cordgrass (Spartina foliosa) boosted California rail populations by providing greater cover and increased habitat area. The hybrid cordgrass (S. alterniflora × S. foliosa) readily invaded tidal mudflats and channels, and both crowded out native tidal marsh plants and increased sediment accretion in the marsh plain. This resulted in modification of tidal marsh geomorphology, hydrology, productivity, and species composition. Our results show that denser California rail populations occur in invasive Spartina than in native Spartina in San Francisco Bay. Herbicide treatment between 2005 and 2012 removed invasive Spartina from open intertidal mud and preserved foraging habitat for shorebirds. However, removal of invasive Spartina caused substantial decreases in California rail populations. Unknown facets of California rail ecology, undesirable interim stages of tidal marsh restoration, and competing management objectives among stakeholders resulted in management planning for endangered species or ecosystem restoration that favored one goal over the other. We have examined this perceived conflict and propose

The use of ESR spectroscopy for the identification and dose assessment of irradiated pink shrimp (Parapenaeus longirostris) from Turkey

NASA Astrophysics Data System (ADS)

Aydaş, Canan; Tepe Çam, Semra; Engin, Birol; Aydın, Talat; Polat, Mustafa

2013-03-01

Turkish pink shrimp (Parapenaeus longirostris) samples were studied by electron spin resonance (ESR) spectroscopy for identification and dose assessment purposes. In this work, the calcified shells of shrimps were used as a sample material. Before irradiation, all shrimp shell samples exhibit one weak ESR singlet with a g-factor of 2.0047. After irradiation, all samples exhibit two asymmetric ESR signal components centered at g-values of 2.0013 and 1.9959. The dose-response curves of the samples exposed to gamma radiations were found to be described well by a single saturation exponential function. Variation of ESR signal intensity of irradiated samples at room and-20 °C temperatures with time in a long-term showed that free radicals responsible from the ESR spectrum of shrimp shells were not stable but still detectable after 87 days. Also, the kinetic behavior of signal at g=2.0013 was studied and the additive dose method was used to evaluate the dose in the product.

Predictive modeling of spinner dolphin (Stenella longirostris) resting habitat in the main Hawaiian Islands.

PubMed

Thorne, Lesley H; Johnston, David W; Urban, Dean L; Tyne, Julian; Bejder, Lars; Baird, Robin W; Yin, Suzanne; Rickards, Susan H; Deakos, Mark H; Mobley, Joseph R; Pack, Adam A; Chapla Hill, Marie

2012-01-01

Predictive habitat models can provide critical information that is necessary in many conservation applications. Using Maximum Entropy modeling, we characterized habitat relationships and generated spatial predictions of spinner dolphin (Stenella longirostris) resting habitat in the main Hawaiian Islands. Spinner dolphins in Hawai'i exhibit predictable daily movements, using inshore bays as resting habitat during daylight hours and foraging in offshore waters at night. There are growing concerns regarding the effects of human activities on spinner dolphins resting in coastal areas. However, the environmental factors that define suitable resting habitat remain unclear and must be assessed and quantified in order to properly address interactions between humans and spinner dolphins. We used a series of dolphin sightings from recent surveys in the main Hawaiian Islands and a suite of environmental variables hypothesized as being important to resting habitat to model spinner dolphin resting habitat. The model performed well in predicting resting habitat and indicated that proximity to deep water foraging areas, depth, the proportion of bays with shallow depths, and rugosity were important predictors of spinner dolphin habitat. Predicted locations of suitable spinner dolphin resting habitat provided in this study indicate areas where future survey efforts should be focused and highlight potential areas of conflict with human activities. This study provides an example of a presence-only habitat model used to inform the management of a species for which patterns of habitat availability are poorly understood.

Predictive Modeling of Spinner Dolphin (Stenella longirostris) Resting Habitat in the Main Hawaiian Islands

PubMed Central

Thorne, Lesley H.; Johnston, David W.; Urban, Dean L.; Tyne, Julian; Bejder, Lars; Baird, Robin W.; Yin, Suzanne; Rickards, Susan H.; Deakos, Mark H.; Mobley, Joseph R.; Pack, Adam A.; Chapla Hill, Marie

2012-01-01

Predictive habitat models can provide critical information that is necessary in many conservation applications. Using Maximum Entropy modeling, we characterized habitat relationships and generated spatial predictions of spinner dolphin (Stenella longirostris) resting habitat in the main Hawaiian Islands. Spinner dolphins in Hawai'i exhibit predictable daily movements, using inshore bays as resting habitat during daylight hours and foraging in offshore waters at night. There are growing concerns regarding the effects of human activities on spinner dolphins resting in coastal areas. However, the environmental factors that define suitable resting habitat remain unclear and must be assessed and quantified in order to properly address interactions between humans and spinner dolphins. We used a series of dolphin sightings from recent surveys in the main Hawaiian Islands and a suite of environmental variables hypothesized as being important to resting habitat to model spinner dolphin resting habitat. The model performed well in predicting resting habitat and indicated that proximity to deep water foraging areas, depth, the proportion of bays with shallow depths, and rugosity were important predictors of spinner dolphin habitat. Predicted locations of suitable spinner dolphin resting habitat provided in this study indicate areas where future survey efforts should be focused and highlight potential areas of conflict with human activities. This study provides an example of a presence-only habitat model used to inform the management of a species for which patterns of habitat availability are poorly understood. PMID:22937022

Modulation rate transfer functions from four species of stranded odontocete (Stenella longirostris, Feresa attenuata, Globicephala melas, and Mesoplodon densirostris).

PubMed

Smith, Adam B; Pacini, Aude F; Nachtigall, Paul E

2018-04-01

Odontocete marine mammals explore the environment by rapidly producing echolocation signals and receiving the corresponding echoes, which likewise return at very rapid rates. Thus, it is important that the auditory system has a high temporal resolution to effectively process and extract relevant information from click echoes. This study used auditory evoked potential methods to investigate auditory temporal resolution of individuals from four different odontocete species, including a spinner dolphin (Stenella longirostris), pygmy killer whale (Feresa attenuata), long-finned pilot whale (Globicephala melas), and Blainville's beaked whale (Mesoplodon densirostris). Each individual had previously stranded and was undergoing rehabilitation. Auditory Brainstem Responses (ABRs) were elicited via acoustic stimuli consisting of a train of broadband tone pulses presented at rates between 300 and 2000 Hz. Similar to other studied species, modulation rate transfer functions (MRTFs) of the studied individuals followed the shape of a low-pass filter, with the ability to process acoustic stimuli at presentation rates up to and exceeding 1250 Hz. Auditory integration times estimated from the bandwidths of the MRTFs ranged between 250 and 333 µs. The results support the hypothesis that high temporal resolution is conserved throughout the diverse range of odontocete species.

Transportation impacts to wildlife on state route 37 in northern San Pablo Bay, California

USGS Publications Warehouse

Winton, Bryan R.; Takekawa, John Y.

2002-01-01

State Route 37 bisects conservation lands managed by San Pablo Bay National Wildlife Refuge (U.S. Fish & Wildlife Service) and Napa-Sonoma Marshes Wildlife Area (California Department of Fish and Game) in Solano and Sonoma Counties. The 2-lane highway connects Interstates 101 and 80 in northern San Francisco Bay and experiences ~26,000 vehicles per day. Road-killed wildlife between Napa River and Tolay Creek bridges (14.7 km) were counted in 2000 to ascertain species composition, relative abundance, and relative occurence (animal fatality interval). The primary objectives of the study were to determine if endangered salt marsh harvest mice (Reithrodontomys raviventris), California clapper rails (Rallus longirostris), or other species of concern were represented, and to collect baseline data on transportation impacts to wildlife in the area. During 51 surveys, 291 dead birds (54.6%) and mammals (45.4%) were observed. Endangered species were not positively identified dead on the highway. In total, 28 bird, 10 mammal and 1 reptile species were positively identified along this section of highway that traverses tidal marsh and diked baylands (i.e., salt ponds, seasonal wetlands, and oat-hay agriculture fields). The mean animal fatality interval for both lanes was one road-kill every 2.1km (2.1 km SD).

Organochlorine residues and shell thickness in eggs of the clapper rail, common gallinule, purple gallinule, and limpkin (Class Aves), eastern and southern United States, 1972-74

USGS Publications Warehouse

Klaas, E.E.; Ohlendorf, H.M.; Cromartie, E.

1980-01-01

Organochlorine residues and shell thicknesses were surveyed in eggs of the clapper rail (Rallus longirostris), purple gallinule (Porphyrula martinica), common gallinule (Gallinula chloropas), and limpkin (Aramus guarauna) from the eastern and southern United States. Clapper rail eggs were collected during 1972-73 in New Jersey, Virginia, and South Carolina. During 1973-74, gallinule eggs were collected in Florida, South Carolina, and Louisiana, and limpkin eggs were collected in Florida. Egg contents were analyzed for residues of organochlorine pesticides, including DDT, TDE, DDE, dieldrin, mirex, heptachlor epoxide, oxychlordane, cis-chlordane (and/or trans-nonachlor), cis-nonachlor, hexachlorobenzene (HCB), toxaphene, and endrin, and for polychlorinated biphenyls (PCBs). Shell thicknesses of recent eggs of these species were compared with archival eggs that had been collected before 1947. With the exception of the limpkin, the majority of eggs analyzed contained residues of p,p'-DDE and PCBs. Geometric means ranged from 0.10 ppm to 1.3 ppm. Small amounts (less than 1.0 ppm) of mirex, dieldrin, cis-chlordane (and/or trans-nonachlor), TDE, and DDT were detected in a few eggs. No evidence of eggshell thinning was found for any of the species studied. DDE residues in clapper rail eggs were higher in New Jersey and Virginia than in South Carolina.

Forest turnover rates follow global and regional patterns of productivity

USGS Publications Warehouse

Stephenson, N.L.; van Mantgem, P.J.

2005-01-01

Organochlorine residues and shell thicknesses were surveyed in eggs of the clapper rail (Rallus longirostris), purple gallinule (Porphyrula martinica), common gallinule (Gallinula chloropas), and limpkin (Aramus guarauna) from the eastern and southern United States. Clapper rail eggs were collected during 1972-73 in New Jersey, Virginia, and South Carolina. During 1973-74, gallinule eggs were collected in Florida, South Carolina, and Louisiana, and limpkin eggs were collected in Florida. Egg contents were analyzed for residues of organochlorine pesticides, including DDT, TDE, DDE, dieldrin, mirex, heptachlor epoxide, oxychlordane, cis-chlordane (and/or trans-nonachlor), cis-nonachlor, hexachlorobenzene (HCB), toxaphene, and endrin, and for polychlorinated biphenyls (PCBs). Shell thicknesses of recent eggs of these species were compared with archival eggs that had been collected before 1947. With the exception of the limpkin, the majority of eggs analyzed contained residues of p,p'-DDE and PCBs. Geometric means ranged from 0.10 ppm to 1.3 ppm. Small amounts (less than 1.0 ppm) of mirex, dieldrin, cis-chlordane (and/or trans-nonachlor), TDE, and DDT were detected in a few eggs. No evidence of eggshell thinning was found for any of the species studied. DDE residues in clapper rail eggs were higher in New Jersey and Virginia than in South Carolina.

Maximizing detection probability of Wetland-dependent birds during point-count surveys in northwestern Florida

USGS Publications Warehouse

Nadeau, C.P.; Conway, C.J.; Smith, B.S.; Lewis, T.E.

2008-01-01

We conducted 262 call-broadcast point-count surveys (1-6 replicate surveys on each of 62 points) using standardized North American Marsh Bird Monitoring Protocols between 31 May and 7 July 2006 on St. Vincent National Wildlife Refuge, an island off the northwest coast of Florida. We conducted double-blind multiple-observer surveys, paired morning and evening surveys, and paired morning and night surveys to examine the influence of call-broadcast and time of day on detection probability. Observer detection probability for all species pooled was 75% and was similar between passive (69%) and call-broadcast (65%) periods. Detection probability was higher on morning than evening (t = 3.0, P = 0.030) or night (t = 3.4, P = 0.042) surveys when we pooled all species. Detection probability was higher (but not significant for all species) on morning compared to evening or night surveys for all five focal species detected on surveys: Least Bittern (Ixobrychus exilis), Clapper Rail (Rallus longirostris), Purple Gallinule (Porphyrula martinica), Common Moorhen (Gallinula chloropus), and American Coot (Fulica americana). We detected more Least Bitterns (t = 2.4, P = 0.064) and Common Moorhens (t = 2.8, P = 0.026) on morning than evening surveys, and more Clapper Rails (t = 5.1, P = 0.014) on morning than night surveys.

Multi-species call-broadcast improved detection of endangered Yuma clapper rail compared to single-species call-broadcast

USGS Publications Warehouse

Nadeau, Christopher P.; Conway, Courtney J.; Piest, Linden; Burger, William P.

2013-01-01

Broadcasting calls of marsh birds during point-count surveys increases their detection probability and decreases variation in the number of birds detected across replicate surveys. However, multi-species monitoring using call-broadcast may reduce these benefits if birds are reluctant to call once they hear broadcasted calls of other species. We compared a protocol that uses call-broadcast for only one species (Yuma clapper rail [Rallus longirostris yumanensis]) to a protocol that uses call-broadcast for multiple species. We detected more of each of the following species using the multi-species protocol: 25 % more pied-billed grebes, 160 % more American bitterns, 52 % more least bitterns, 388 % more California black rails, 12 % more Yuma clapper rails, 156 % more Virginia rails, 214 % more soras, and 19 % more common gallinules. Moreover, the coefficient of variation was smaller when using the multi-species protocol: 10 % smaller for pied-billed grebes, 38 % smaller for American bitterns, 19 % smaller for least bitterns, 55 % smaller for California black rails, 5 % smaller for Yuma clapper rails, 38 % smaller for Virginia rails, 44 % smaller for soras, and 8 % smaller for common gallinules. Our results suggest that multi-species monitoring approaches may be more effective and more efficient than single-species approaches even when using call-broadcast.

Endangered light-footed clapper rail affects parasite community structure in coastal wetlands

USGS Publications Warehouse

Whitney, Kathleen L.; Hechinger, Ryan F.; Kuris, Armand M.; Lafferty, Kevin D.

2007-01-01

An extinction necessarily affects community members that have obligate relationships with the extinct species. Indirect or cascading effects can lead to even broader changes at the community or ecosystem level. However, it is not clear whether generalist parasites should be affected by the extinction of one of their hosts. We tested the prediction that loss of a host species could affect the structure of a generalist parasite community by investigating the role of endangered Light-footed Clapper Rails (Rallus longirostris levipes) in structuring trematode communities in four tidal wetlands in southern California, USA (Carpinteria Salt Marsh, Mugu Lagoon) and Mexico (Estero de Punta Banda, Bahia Falsa–San Quintín). We used larval trematode parasites in first intermediate host snails (Cerithidea californica) as windows into the adult trematodes that parasitize Clapper Rails. Within and among wetlands, we found positive associations between Clapper Rails and four trematode species, particularly in the vegetated marsh habitat where Clapper Rails typically occur. This suggests that further loss of Clapper Rails is likely to affect the abundance of several competitively dominant trematode species in wetlands with California horn snails, with possible indirect effects on the trematode community and changes in the impacts of these parasites on fishes and invertebrates.

Antioxidant and antimicrobial proprieties of chitin and chitosan extracted from Parapenaeus Longirostris shrimp shell waste.

PubMed

Hafsa, J; Smach, M A; Charfeddine, B; Limem, K; Majdoub, H; Rouatbi, S

2016-01-01

Chitosan, the linear polymer, is produced by alkali deacetylation of chitin (CHI). Recently chitin and chitosan were attracted marked interest due to their biocompatibility, biodegradability and non-toxicity. In this study, chitin was extracted from shrimp shell (Parapenaeus longirostris) and chitosan was deacetylated by classical and ultrasound-assisted method. The identification of functional groups and the determination of degree of deacetylation of chitin (CHI), classical deacetylated chitosan (CDC) and ultrasound-assisted deacetylated chitosan (UDC) were carried through Fourier Transform-Infrared Spectroscopy. Their antimicrobial and antioxidant activity were also investigated. The degree of deacetylation of CHI, CDC and UDC is 33.64%, 73.68% and 83.55%, respectively. Results showed that CHI, CDC and UDC exhibited a good antimicrobial activity against (S. aureus, E. coli, P. aeruginosa, K. pneumonia) and (C. albicans and C. parapsilosis). The scavenging ability of CHI, CDC and UDC on 1,1-diphenyl-2-picrylhydrazyl radicals is ranging from 4.71% to 21.25%, 11.45% to 32.78% and 18.27% to 44.17%, respectively, at the concentrations of 0.25 to 1mg/mL. The inhibition of lipid peroxidation with thiobarbituric acid-reacting substances is ranging from 11.7% to 51.63%, 17.24% to 63.52% and 29.31% to 77.39%, respectively, at varying concentrations of 0.25 to 1mg/mL. The effectiveness of CHI, CDC and UDC is correlated with their degree of deacetylation. The results indicate the possibility of exploiting chitin and chitosan as antimicrobial agent. Copyright © 2015 Académie Nationale de Pharmacie. Published by Elsevier Masson SAS. All rights reserved.

Isolation By Distance (IBD) signals in the deep-water rose shrimp Parapenaeus longirostris (Lucas, 1846) (Decapoda, Panaeidae) in the Mediterranean Sea.

PubMed

Lo Brutto, S; Maggio, T; Arculeo, M

2013-09-01

The identification of boundaries of genetic demes is one of the major goals for fishery management, and few Mediterranean commercial species have not been studied from a genetic point of view yet. The deep-water rose shrimp Parapenaeus longirostris (Lucas, 1846) is one of the most important components of commercial landings in Mediterranean, its fishery aspects have received much attention, regrettably without any concern for the genetic architecture of its populations. The population structure in the central and eastern Mediterranean Sea (captures from six Italian and two Greek landings) has been analysed on the basis of surveys carried out with mitochondrial and AFLP markers. Data revealed the presence of a gradual discrepancy along a west-east axis. This species, occurring mainly at a depth of between 100 and 400 m, is not strongly confined in isolated demes, but it demonstrates an 'Isolation By Distance' model, within the Mediterranean Sea, which includes geographical areas with a some degree of isolation. The role of hydrodynamic forces, such as currents, water fronts, is discussed; and a further evidence of the 'Levantine isolation' within Mediterranean basin is shown. Copyright © 2013 Elsevier Ltd. All rights reserved.

Structure and phylogeography of two tropical predators, spinner (Stenella longirostris) and pantropical spotted (S. attenuata) dolphins, from SNP data

PubMed Central

Morin, Phillip A.

2018-01-01

Little is known about global patterns of genetic connectivity in pelagic dolphins, including how circumtropical pelagic dolphins spread globally following the rapid and recent radiation of the subfamily delphininae. In this study, we tested phylogeographic hypotheses for two circumtropical species, the spinner dolphin (Stenella longirostris) and the pantropical spotted dolphin (Stenella attenuata), using more than 3000 nuclear DNA single nucleotide polymorphisms (SNPs) in each species. Analyses for population structure indicated significant genetic differentiation between almost all subspecies and populations in both species. Bayesian phylogeographic analyses of spinner dolphins showed deep divergence between Indo-Pacific, Atlantic and eastern tropical Pacific Ocean (ETP) lineages. Despite high morphological variation, our results show very close relationships between endemic ETP spinner subspecies in relation to global diversity. The dwarf spinner dolphin is a monophyletic subspecies nested within a major clade of pantropical spinner dolphins from the Indian and western Pacific Ocean populations. Population-level division among the dwarf spinner dolphins was detected—with the northern Australia population being very different from that in Indonesia. In contrast to spinner dolphins, the major boundary for spotted dolphins is between offshore and coastal habitats in the ETP, supporting the current subspecies-level taxonomy. Comparing these species underscores the different scale at which population structure can arise, even in species that are similar in habitat (i.e. pelagic) and distribution. PMID:29765639

Sympatric diversification vs. immigration: deciphering host-plant specialization in a polyphagous insect, the stolbur phytoplasma vector Hyalesthes obsoletus (Cixiidae).

PubMed

Imo, Miriam; Maixner, Michael; Johannesen, Jes

2013-04-01

The epidemiology of vector transmitted plant diseases is highly influenced by dispersal and the host-plant range of the vector. Widening the vector's host range may increase transmission potential, whereas specialization may induce specific disease cycles. The process leading to a vector's host shift and its epidemiological outcome is therefore embedded in the frameworks of sympatric evolution vs. immigration of preadapted populations. In this study, we analyse whether a host shift of the stolbur phytoplasma vector, Hyalesthes obsoletus from field bindweed to stinging nettle in its northern distribution range evolved sympatrically or by immigration. The exploitation of stinging nettle has led to outbreaks of the grapevine disease bois noir caused by a stinging nettle-specific phytoplasma strain. Microsatellite data from populations from northern and ancestral ranges provide strong evidence for sympatric host-race evolution in the northern range: Host-plant associated populations were significantly differentiated among syntopic sites (0.054 < F(HT) < 0.098) and constant over 5 years. While gene flow was asymmetric from the old into the predicted new host race, which had significantly reduced genetic diversity, the genetic identity between syntopic host-race populations in the northern range was higher than between these populations and syntopic populations in ancestral ranges, where there was no evidence for genetic host races. Although immigration was detected in the northern field bindweed population, it cannot explain host-race diversification but suggests the introduction of a stinging nettle-specific phytoplasma strain by plant-unspecific vectors. The evolution of host races in the northern range has led to specific vector-based bois noir disease cycles. © 2013 Blackwell Publishing Ltd.

Three new species of Protogyrodactylus Johnston & Tiegs, 1922 (Monogenoidea: Dactylogyridae) from the gills of the longtail silverbiddy Gerres longirostris (Teleostei: Gerreidae) in the Red Sea.

PubMed

Galli, Paolo; Kritsky, Delane C

2008-03-01

Twenty-one specimens of the longtailed silverbiddy Gerres longirostris (Gerreidae) were examined for dactylogyrid parasites from the Nabq Managed Resource Protected Area, Ras Mohammed National Park (Red Sea) near Sharm El-Sheikh, South Sinai, Egypt. The diagnosis of Protogyrodactylus Johnston & Tiegs, 1922 was amended, and three new species, P. federicae n. sp., P. zullinii n. sp. and P. alatus n. sp., were recovered and described; the prevalence of each species was 100%. P. federicae most closely resembled P. alienus Bychowsky & Nagibina, 1974, but differed from it by possessing two anteromedial projections on the ventral bar, a claw-like ventral anchor sclerite and spatulate dorsal bars. P. zullini was most similar to P. quadratus Johnston & Tiegs, 1922, from which it differed by having a distal hook on the superficial root of the dorsal anchor, an evenly curved ventral anchor shaft and point, and a flange on the bulbous base of the male copulatory organ. P. alatus was closest to P. youngi Bychowsky & Nagibina, 1974, from which it differed by having delicate anchors and two prominent anteromedial processes on the ventral bar.

Abundance and Survival Rates of the Hawai’i Island Associated Spinner Dolphin (Stenella longirostris) Stock

PubMed Central

Tyne, Julian A.; Pollock, Kenneth H.; Johnston, David W.; Bejder, Lars

2014-01-01

Reliable population estimates are critical to implement effective management strategies. The Hawai’i Island spinner dolphin (Stenella longirostris) is a genetically distinct stock that displays a rigid daily behavioural pattern, foraging offshore at night and resting in sheltered bays during the day. Consequently, they are exposed to frequent human interactions and disturbance. We estimated population parameters of this spinner dolphin stock using a systematic sampling design and capture–recapture models. From September 2010 to August 2011, boat-based photo-identification surveys were undertaken monthly over 132 days (>1,150 hours of effort; >100,000 dorsal fin images) in the four main resting bays along the Kona Coast, Hawai’i Island. All images were graded according to photographic quality and distinctiveness. Over 32,000 images were included in the analyses, from which 607 distinctive individuals were catalogued and 214 were highly distinctive. Two independent estimates of the proportion of highly distinctive individuals in the population were not significantly different (p = 0.68). Individual heterogeneity and time variation in capture probabilities were strongly indicated for these data; therefore capture–recapture models allowing for these variations were used. The estimated annual apparent survival rate (product of true survival and permanent emigration) was 0.97 SE±0.05. Open and closed capture–recapture models for the highly distinctive individuals photographed at least once each month produced similar abundance estimates. An estimate of 221±4.3 SE highly distinctive spinner dolphins, resulted in a total abundance of 631±60.1 SE, (95% CI 524–761) spinner dolphins in the Hawai’i Island stock, which is lower than previous estimates. When this abundance estimate is considered alongside the rigid daily behavioural pattern, genetic distinctiveness, and the ease of human access to spinner dolphins in their preferred resting habitats, this

Abundance and survival rates of the Hawai'i Island associated spinner dolphin (Stenella longirostris) stock.

PubMed

Tyne, Julian A; Pollock, Kenneth H; Johnston, David W; Bejder, Lars

2014-01-01

Reliable population estimates are critical to implement effective management strategies. The Hawai'i Island spinner dolphin (Stenella longirostris) is a genetically distinct stock that displays a rigid daily behavioural pattern, foraging offshore at night and resting in sheltered bays during the day. Consequently, they are exposed to frequent human interactions and disturbance. We estimated population parameters of this spinner dolphin stock using a systematic sampling design and capture-recapture models. From September 2010 to August 2011, boat-based photo-identification surveys were undertaken monthly over 132 days (>1,150 hours of effort; >100,000 dorsal fin images) in the four main resting bays along the Kona Coast, Hawai'i Island. All images were graded according to photographic quality and distinctiveness. Over 32,000 images were included in the analyses, from which 607 distinctive individuals were catalogued and 214 were highly distinctive. Two independent estimates of the proportion of highly distinctive individuals in the population were not significantly different (p = 0.68). Individual heterogeneity and time variation in capture probabilities were strongly indicated for these data; therefore capture-recapture models allowing for these variations were used. The estimated annual apparent survival rate (product of true survival and permanent emigration) was 0.97 SE ± 0.05. Open and closed capture-recapture models for the highly distinctive individuals photographed at least once each month produced similar abundance estimates. An estimate of 221 ± 4.3 SE highly distinctive spinner dolphins, resulted in a total abundance of 631 ± 60.1 SE, (95% CI 524-761) spinner dolphins in the Hawai'i Island stock, which is lower than previous estimates. When this abundance estimate is considered alongside the rigid daily behavioural pattern, genetic distinctiveness, and the ease of human access to spinner dolphins in their preferred resting habitats, this Hawai'i Island

Does White Clover (Trifolium repens) Abundance in Temperate Pastures Determine Sitona obsoletus (Coleoptera: Curculionidae) Larval Populations?

PubMed

McNeill, Mark R; van Koten, Chikako; Cave, Vanessa M; Chapman, David; Hodgson, Hamish

2016-01-01

To determine if host plant abundance determined the size of clover root weevil (CRW) Sitona obsoletus larval populations, a study was conducted over 4 years in plots sown in ryegrass ( Lolium perenne ) (cv. Nui) sown at either 6 or 30 kg/ha and white clover ( Trifolium repens ) sown at a uniform rate of 8 kg/ha. This provided a range of % white clover content to investigate CRW population establishment and impacts on white clover survival. Larval sampling was carried out in spring (October) when larval densities are near their spring peak at Lincoln (Canterbury, New Zealand) with % clover measured in autumn (April) and spring (September) of each year. Overall, mean larval densities measured in spring 2012-2015 were 310, 38, 59, and 31 larvae m -2 , respectively. There was a significant decline in larval populations between 2012 and 2013, but spring populations were relatively uniform thereafter. The mean % white clover measured in autumns of 2012 to 2015 was 17, 10, 3, and 11%, respectively. In comparison, mean spring % white clover from 2012 to 2015, averaged c. 5% each year. Analysis relating spring (October) larval populations to % white clover measured in each plot in autumn (April) found the 2012 larval population to be statistically significantly larger in the ryegrass 6 kg/ha plots than 30 kg/ha plots. Thereafter, sowing rate had no significant effect on larval populations. From 2013 to 2015, spring larval populations had a negative relationship with the previous autumn % white clover with the relationship highly significant for the 2014 data. When CRW larval populations in spring 2013 to 2015 were predicted from the 2013 to 2015 autumn % white clover, respectively, based on their positive relationship in 2012, the predicted densities were substantially larger than those observed. Conversely, when 2015 spring larval data and % clover was regressed against 2012-2014 larval populations, observed densities tended to be higher than predicted, but the numbers

Habitat models to predict wetland bird occupancy influenced by scale, anthropogenic disturbance, and imperfect detection

USGS Publications Warehouse

Glisson, Wesley J.; Conway, Courtney J.; Nadeau, Christopher P.; Borgmann, Kathi L.

2017-01-01

Understanding species–habitat relationships for endangered species is critical for their conservation. However, many studies have limited value for conservation because they fail to account for habitat associations at multiple spatial scales, anthropogenic variables, and imperfect detection. We addressed these three limitations by developing models for an endangered wetland bird, Yuma Ridgway's rail (Rallus obsoletus yumanensis), that examined how the spatial scale of environmental variables, inclusion of anthropogenic disturbance variables, and accounting for imperfect detection in validation data influenced model performance. These models identified associations between environmental variables and occupancy. We used bird survey and spatial environmental data at 2473 locations throughout the species' U.S. range to create and validate occupancy models and produce predictive maps of occupancy. We compared habitat-based models at three spatial scales (100, 224, and 500 m radii buffers) with and without anthropogenic disturbance variables using validation data adjusted for imperfect detection and an unadjusted validation dataset that ignored imperfect detection. The inclusion of anthropogenic disturbance variables improved the performance of habitat models at all three spatial scales, and the 224-m-scale model performed best. All models exhibited greater predictive ability when imperfect detection was incorporated into validation data. Yuma Ridgway's rail occupancy was negatively associated with ephemeral and slow-moving riverine features and high-intensity anthropogenic development, and positively associated with emergent vegetation, agriculture, and low-intensity development. Our modeling approach accounts for common limitations in modeling species–habitat relationships and creating predictive maps of occupancy probability and, therefore, provides a useful framework for other species.

First Report of 13 Species of Culicoides (Diptera: Ceratopogonidae) in Mainland Portugal and Azores by Morphological and Molecular Characterization

PubMed Central

Pereira da Fonseca, Isabel; Delécolle, Jean-Claude; Wilson, Anthony; Meireles, José; Lucientes, Javier; Ribeiro, Rita; Boinas, Fernando

2012-01-01

The genus Culicoides (Diptera: Ceratopogonidae) contains important vectors of animal and human diseases, including bluetongue, African horse sickness and filariosis. A major outbreak of bluetongue occurred in mainland Portugal in 2004, forty eight years after the last recorded case. A national Entomological Surveillance Plan was initiated in mainland Portugal, Azores and the Madeira archipelagos in 2005 in order to better understand the disease and facilitate policy decisions. During the survey, the most prevalent Culicoides species in mainland Portugal was C. imicola (75.3%) and species belonging to the Obsoletus group (6.5%). The latter were the most prevalent in Azores archipelago, accounting for 96.7% of the total species identified. The Obsoletus group was further characterized by multiplex Polymerase Chain Reaction to species level showing that only two species of this group were present: C. obsoletus sensu strictu (69.6%) and C. scoticus (30.4%). Nine species of Culicoides were detected for the first time in mainland Portugal: C. alazanicus, C. bahrainensis, C. deltus, C. lupicaris, C. picturatus, C. santonicus, C. semimaculatus, C. simulator and C. subfagineus. In the Azores, C. newsteadi and C. circumscriptus were identified for the first time from some islands, and bluetongue vectors belonging to the Obsoletus group (C. obsoletus and C. scoticus) were found to be widespread. PMID:22536340

Impact and Recovery Pattern of a Spring Fire on a Pacific Coast Marsh - Observations and Implications for Endangered Species

NASA Astrophysics Data System (ADS)

Brown, L. N.; Willis, K. S.; Ambrose, R. F.; MacDonald, G. M.

2015-12-01

The flammability of California coastal marsh vegetation is highest in winter and spring when dominant high marsh plants such as Sarcocornia pacifica are dormant. With climate change the number of cool-season fires are increasing in the state, and marsh systems are becoming more vulnerable to fire disturbance. Very little information exists in peer-reviewed or grey literature on the presence of fire in Pacific Coast tidal marshes. In 1993, the Green Meadows fire in Ventura County, California burned a small portion of tidally influenced Sarcocornia­-dominated marsh at Point Mugu. After the May 2013 Springs Fire burned a similar portion of the salt marsh vegetation, we conducted a two-year vegetation recovery survey using transects of surface vegetation plots and MODIS derived NDVI remote sensing monitoring. Recovery during the first year was limited. Sixteen months into the recovery period, percent plant coverage reached an average of approximately 60% for all plots in the burned area, as opposed to an average of 100% in control plots, and remained at that level for the duration of the study. NDVI did not approach near pre-fire conditions until 19 months after the fire. While recovery may have been influenced by California's current extreme drought conditions, the recurrence of fire and rate of recovery raise many important questions as to the role of fire in Pacific coast tidal marshes. For example, the lack of Salicornia cover over more than an entire breeding season would be detrimental to protected species such as Rallus obsoletus. Fire adds new vulnerabilities on critical tidal marsh habitat already taxed by the threat of sea-level rise, coastal squeeze and invasive species.

Tidal marsh susceptibility to sea-level rise: importance of local-scale models

USGS Publications Warehouse

Thorne, Karen M.; Buffington, Kevin J.; Elliott-Fisk, Deborah L.; Takekawa, John Y.

2015-01-01

Increasing concern over sea-level rise impacts to coastal tidal marsh ecosystems has led to modeling efforts to anticipate outcomes for resource management decision making. Few studies on the Pacific coast of North America have modeled sea-level rise marsh susceptibility at a scale relevant to local wildlife populations and plant communities. Here, we use a novel approach in developing an empirical sea-level rise ecological response model that can be applied to key management questions. Calculated elevation change over 13 y for a 324-ha portion of San Pablo Bay National Wildlife Refuge, California, USA, was used to represent local accretion and subsidence processes. Next, we coupled detailed plant community and elevation surveys with measured rates of inundation frequency to model marsh state changes to 2100. By grouping plant communities into low, mid, and high marsh habitats, we were able to assess wildlife species vulnerability and to better understand outcomes for habitat resiliency. Starting study-site conditions were comprised of 78% (253-ha) high marsh, 7% (30-ha) mid marsh, and 4% (18-ha) low marsh habitats, dominated by pickleweed Sarcocornia pacifica and cordgrass Spartina spp. Only under the low sea-level rise scenario (44 cm by 2100) did our models show persistence of some marsh habitats to 2100, with the area dominated by low marsh habitats. Under mid (93 cm by 2100) and high sea-level rise scenarios (166 cm by 2100), most mid and high marsh habitat was lost by 2070, with only 15% (65 ha) remaining, and a complete loss of these habitats by 2080. Low marsh habitat increased temporarily under all three sea-level rise scenarios, with the peak (286 ha) in 2070, adding habitat for the endemic endangered California Ridgway’s rail Rallus obsoletus obsoletus. Under mid and high sea-level rise scenarios, an almost complete conversion to mudflat occurred, with most of the area below mean sea level. Our modeling assumed no marsh migration upslope due to human

Surveillance of biting midges (Culicoides spp.) in Northern Ireland: influence of seasonality, surrounding habitat and livestock housing.

PubMed

Jess, S; Thompson, G M; Clawson, S; Forsythe, I W N; Rea, I; Gordon, A W; Murchie, A K

2018-03-01

Biting midges, Culicoides spp. (Diptera: Ceratopogonidae), are important vectors of viral pathogens. Following the outbreak of bluetongue serotype 8 in Europe between 2006 and 2009, many Culicoides surveillance programmes were initiated to identify vector-active periods, in accordance with European Commission regulation 2007/1266/EC. This study utilized surveillance data from 4 years of continuous light-trapping at 14 sites in Northern Ireland. The number of captured Culicoides varied from none during the vector-free period (December-April) to more than 36 000 per night during peak activity in the summer. The Obsoletus group represented 75% of Culicoides collected and the Pulicaris group represented 21%. A total of 91% of Culicoides were female, of which 42% were parous. Abundance data, sex ratios and parous rates suggested that both the Obsoletus and Pulicaris groups underwent three generations/year. The Obsoletus group was associated with cattle-rearing habitats and woodland, the Impunctatus group was found in habitats related to sheep rearing and the Pulicaris group were associated with both cattle and sheep. Housing did not reduce incursion of female Obsoletus group Culicoides but it did for males and for the Pulicaris group Culicoides. The influence of housing was strongly affected by time of year, probably reflecting the presence of livestock indoors/outdoors. © 2017 The Royal Entomological Society.

Geo-statistical analysis of Culicoides spp. distribution and abundance in Sicily, Italy.

PubMed

Blanda, Valeria; Blanda, Marcellocalogero; La Russa, Francesco; Scimeca, Rossella; Scimeca, Salvatore; D'Agostino, Rosalia; Auteri, Michelangelo; Torina, Alessandra

2018-02-01

Biting midges belonging to Culicoides imicola, Culicoides obsoletus complex and Culicoides pulicaris complex (Diptera: Ceratopogonidae) are increasingly implicated as vectors of bluetongue virus in Palaearctic regions. Culicoides obsoletus complex includes C. obsoletus (sensu stricto), C. scoticus, C. dewulfi and C. chiopterus. Culicoides pulicaris and C. lupicaris belong to the Culicoides pulicaris complex. The aim of this study was a geo-statistical analysis of the abundance and spatial distribution of Culicoides spp. involved in bluetongue virus transmission. As part of the national bluetongue surveillance plan 7081 catches were collected in 897 Sicilian farms from 2000 to 2013. Onderstepoort-type blacklight traps were used for sample collection and each catch was analysed for the presence of Culicoides spp. and for the presence and abundance of Culicoides vector species (C. imicola, C. pulicaris / C. obsoletus complexes). A geo-statistical analysis was carried out monthly via the interpolation of measured values based on the Inverse Distance Weighted method, using a GIS tool. Raster maps were reclassified into seven classes according to the presence and abundance of Culicoides, in order to obtain suitable maps for Map Algebra operations. Sicilian provinces showing a very high abundance of Culicoides vector species were Messina (80% of the whole area), Palermo (20%) and Catania (12%). A total of 5654 farms fell within the very high risk area for bluetongue (21% of the 26,676 farms active in Sicily); of these, 3483 farms were in Messina, 1567 in Palermo and 604 in Catania. Culicoides imicola was prevalent in Palermo, C. pulicaris in Messina and C. obsoletus complex was very abundant over the whole island with the highest abundance value in Messina. Our study reports the results of a geo-statistical analysis concerning the abundance and spatial distribution of Culicoides spp. in Sicily throughout the fourteen year study. It provides useful decision support in the

Culicoides and other biting flies on the Palos Verdes Peninsula of Southern California, and their possible relationship to equine dermatitis.

PubMed

Mullens, Bradley A; Owen, Jeb P; Heft, David E; Sobeck, Ruth V

2005-03-01

Biting insects were sampled to investigate the cause(s) of dermatitis (putative Culicoides hypersensitivity [CHS]) on horses on the Palos Verdes Peninsula, Los Angeles County, California. Suction traps baited with CO2 were operated at 5 sites from April 2002 to August 2003, supplemented by sampling from horses. Six species of Culicoides, 7 species of mosquitoes, and occasional Simulium and Stomoxys were collected in traps. Culicoides sonorensis was the most common midge trapped, although C. obsoletus and C. freeborni also were collected repeatedly. Insects from the belly region of horses in spring (peak dermatitis period) were mostly C. obsoletus, which were far more abundant than indicated by CO2-baited suction traps. The predominant mosquito was Culiseta incidens; Culex quinquefasciatus and Cx. tarsalis also could be common, depending on the site. Mosquitoes, particularly Cs. incidens, were more abundant the 2nd year (normal rainfall), whereas C. sonorensis and C. freeborni were more abundant the 1st year (drought period). Culicoides obsoletus, supplemented by C. sonorensis, is regarded as a primary suspect causing CHS in this area.

Seasonal population fluctuations of Culicoides midges in the Smolenskaya, Pskovskaya and Vladimirskaya provinces of Western Russia in 2013.

PubMed

Sprygin, Alexander; Fiodorova, Olga; Babin, Yurii; Pavelko, Vasilii; Bellis, Glenn; Kononov, Alexander

2016-09-30

Light trapping for biting midges was performed on cattle farms in 3 provinces of Western Russia in 2013. A total of 9,272, 2,457, and 10,245 Culicoides midges were collected from farms in Smolenskaya, Pskovskaya, and Vladimirskaya provinces, respectively. More than 99% of collected midges belonged to either the Obsoletus or Pulicaris complexes. Species belonging to the Obsoletus complex were the most abundant in Pskovskaya, whereas species from the Pulicaris complex dominated the catches in Vladimirskaya and Smolenskaya provinces. The seasonal duration of adult activity in all 3 regions was approximately 4.5 months.

Species-specific elimination of polychlorinated biphenyls in estuarine animals and its impact on residue patterns.

PubMed

Goerke, H; Weber, K

2001-03-01

Elimination kinetics of tetra-, penta- and hexachlorobiphenyls (IUPAC Nos. 44, 52, 87, 95, 101, 153) were investigated by laboratory experiments in three species of different phyla: Nereis diversicolor (Polychaeta), Palaemon longirostris (Crustacea) and Platichthys flesus (Pisces). Half-lives were species-specific and structure-dependent. Palaemon longirostris eliminated all components fastest. N. diversicolor was faster than Platichthys flesus except for components 95 and 153. Contrary to the fish species, the two invertebrates contained significant amounts of polar transformation products of No. 52, which had been applied as 14C labelled. Therefore, the faster elimination by Palaemon longirostris and N. diversicolor was assumed to be generally due to increased biotransformation. Elimination was in accordance with polychlorinated biphenyl (PCB) residue patterns obtained from field samples of the species. Congeners with vicinal H atoms in m,p positions were under-represented in Palaemon longirostris and so were congeners with > or = 7 Cl in N. diversicolor, while the PCB residue pattern in Platichthys flesus was similar to that of Clophen A60. By comparing percentages of the experimental congeners in sigma PCB and their elimination half-lives in the three species, it was revealed that residue patterns were also influenced by species-dependent uptake, e.g. feeding habits. Extractable organic matter-based sigma PCB levels increased with trophic levels of the three species.

Modeling the Cienega de Santa Clara, Sonora, Mexico

NASA Astrophysics Data System (ADS)

Huckelbridge, K. H.; Hidalgo, H.; Dracup, J.; Ibarra Obando, S. E.

2002-12-01

The Cienega de Santa Clara is a created wetland located in the Colorado River Delta (CRD), in Sonora, Mexico. It is sustained by agricultural return flows from the Wellton-Mohawk Irrigation District in Arizona and the Mexicali Valley in Mexico. As one of the few wetlands remaining in the CRD, it provides critical habitat for several species of fish and birds, including several endangered species such as the desert pupfish (Cyprinodon macularius) and the Yuma clapper rail (Rallus longirostris yumanensis). However, this habitat may be in jeopardy if the quantity and quality of the agricultural inflows are significantly altered. This study seeks to develop a model that describes the dynamics of wetland hydrology, vegetation, and water quality as a function of inflow variability and salinity loading. The model is divided into four modules set up in sequence. For a given time step, the sequence begins with the first module, which utilizes basic diffusion equations to simulate mixing processes in the shallow wetland when the flow and concentration of the inflow deviate from the baseline. The second module develops a vegetated-area response to the resulting distribution of salinity in the wetland. Using the new area of vegetation cover determined by the second module and various meteorological variables, the third module calculates the evapotranspiration rate for the wetland, using the Penman-Montieth equation. Finally, the fourth module takes the overall evapotranspiration rate, along with precipitation, inflow and outflow and calculates the new volume of the wetland using a water balance. This volume then establishes the initial variables for the next time step. The key outputs from the model are salinity concentration, area of vegetation cover, and wetland volume for each time step. Results from this model will illustrate how the wetland's hydrology, vegetation, and water quality are altered over time under various inflow scenarios. These outputs can ultimately be used

Characterization of Bois noir isolates by restriction fragment length polymorphism of a Stolbur-specific putative membrane protein gene.

PubMed

Pacifico, D; Alma, A; Bagnoli, B; Foissac, X; Pasquini, G; Tessitori, M; Marzachì, C

2009-06-01

Bois noir phytoplasma (BNp), widespread in wine-producing areas of Europe and endemic in France and Italy, is classified in the 16SrXII-A subgroup, whose members are referred to as Stolbur phytoplasmas. The 16S rDNA gene of Stolbur phytoplasma shows low variability, and few non-ribosomal genes are available as markers to assess variation among isolates. We used the Stolbur-specific stol-1H10 gene, encoding a putative membrane-exposed protein, to investigate genetic diversity of French and Italian BNp isolates from plants and insects. Amplification of stol-1H10 from infected grapevines, weeds, and Hyalesthes obsoletus produced fragments of three sizes, and restriction fragment length polymorphism analysis divided these amplicons further into 12 profiles (V1 to V12). French BNp isolates were more variable than Italian ones, and different profiles were present in infected grapevines from France and Italy. Isolate V3, most abundant among Italian affected grapes but present among French ones, was found in one Urtica dioica sample and in all H. obsoletus collected on this species. Four Italian-specific profiles were represented among infected Convolvulus arvensis, the most frequent of which (V12) was also detected in H. obsoletus collected on this species. Most of the variability in the stol-1H10 sequence was associated with type II on the tuf gene.

Toxic and feeding deterrent effects of native aquatic macrophytes on exotic grass carp (Ctenopharyngodon idella).

PubMed

Murphy, Joseph E; Beckmen, Kimberlee B; Johnson, Julie K; Cope, Rhian B; Lawmaster, Todd; Beasley, Val R

2002-08-01

Declines of amphibians have been attributed to many factors including habitat degradation. The introduction of grass carp (Ctenopharyngodon idella) as a biological agent for aquatic plant control in ponds and lakes managed narrowly for human recreation has likely contributed to amphibian declines through massive plant removal and associated habitat simplification and thus degradation. This research examined the interactions among grass carp and three Midwestern aquatic plants (Jussiaea repens, Ranunculus longirostris, and R. flabellaris) that may be of value in rehabilitation of habitats needed by amphibians. The feeding preference study found that C. idella avoided eating both J. repens and R. longirostris. Ranunculus species studied to date contain a vesicant toxin called ranunculin that is released upon mastication. The study that compared the effects of R. flabellaris, J. repens and a control food administered by tube feeding to C. idella found significant lesions only in the mucosal epithelium of the individuals exposed to R.flabellaris. The avoidance by C. idella of J. repens and R. longirostris in the feeding preference study, and the significant toxicity of R. flabellaris demonstrated by the dosing study, indicate these plants warrant further examination as to their potential effectiveness in aquatic amphibian habitat rehabilitation.

Marsh birds and the North American Breeding Bird Survey: judging the value of a landscape level survey for habitat specialist species with low detection rates

USGS Publications Warehouse

Sauer, J.R.

1999-01-01

relative abundance. Examples include Yellow Rail (Coturnicops noveboracensis) (T=12 %/yr; P= 0.0085; N =28; routes; RA=0.05; Power=0.37; Needed samples=85), Black Rail (Laterallus jamaicensis) (No trend data or power information available, N =8), Clapper Rail (Rallus longirostris) (T=1.9%/yr; P=0.55; N =64; RA=0.31; Power=0.35; Needed samples=590), King Rail (Rallus elegans) (T=-4.2 %/yr; P= 0.03; N =76; Power=0.41; Needed samples=159), Sora (Porzana carolina) (T=0.98 %/yr; P= 0.24; N =720; RA= 0.92; Power=0.69; Needed samples= 377), and Common Snipe (Gallinago gallinago) (T=-0.24 %/yr; P= 0.54; N =1412; RA= 2.19; Power=0.98; Needed samples=205). With regard to quality of BBS data, marsh birds fall into 3 categories: (1) almost never encountered on BBS routes; (2) encountered at extremely low abundances on BBS routes; and (3) probably fairly well sampled by BBS roadside counts. BBS data can provide useful information for many marsh bird species, but users should be aware of the limitations of the BBS sample for monitoring species that have low visibility from point counts and prefer habitats not often encountered on roadsides.

Contrasted accumulation patterns of persistent organic pollutants and mercury in sympatric tropical dolphins from the south-western Indian Ocean

DOE Office of Scientific and Technical Information (OSTI.GOV)

Dirtu, Alin C.; Department of Chemistry, “Al. I. Cuza” University of Iasi, 700506 Iasi; Malarvannan, Govindan

Due to their high trophic position and long life span, small cetaceans are considered as suitable bioindicators to monitor the presence of contaminants in marine ecosystems. Here, we document the contamination with persistent organic pollutants (POPs) and total mercury (T-Hg) of spinner (Stenella longirostris, n =21) and Indo-Pacific bottlenose dolphins (Tursiops aduncus, n=32) sampled from the coastal waters of La Réunion (south-western Indian Ocean). In addition, seven co-occurring teleost fish species were sampled and analyzed as well. Blubber samples from living dolphins and muscle from teleosts were analyzed for polychlorinated biphenyls (PCBs), DDT and metabolites (DDTs), chlordanes (CHLs), hexachlorocyclohexanes (HCHs),more » hexachlorobenzene (HCB), and polybrominated diphenyl ethers (PBDEs). Methoxylated PBDEs (MeO-PBDEs), reported as having a natural origin, were also analyzed. T-Hg levels were measured in blubber and skin biopsies of the two dolphin species. Stable isotopes δ{sup 13}C and δ{sup 15}N values were determined in skin of the dolphins and in the muscle of teleosts. For PCBs, HCHs and T-Hg, concentrations were significantly higher in T. aduncus than in S. longirostris. For other POP levels, intra-species variability was high. MeO-PBDEs were the dominant compounds (55% of the total POPs) in S. longirostris, while PCBs dominated (50% contribution) in T. aduncus. Other contaminants showed similar profiles between the two species. Given the different patterns of POPs and T-Hg contamination and the δ{sup 15}N values observed among analyzed teleosts, dietary and foraging habitat preferences most likely explain the contrasted contaminant profiles observed in the two dolphin species. Levels of each class of contaminants were significantly higher in males than females. Despite their spatial and temporal overlap in the waters of La Réunion, S. longirostris and T. aduncus are differently exposed to contaminant accumulation. - Highlights: • POPs

78 FR 33811 - Marine Mammals; File No. 17941

Federal Register 2010, 2011, 2012, 2013, 2014

2013-06-05

... educational photography on bottlenose (Tursiops truncatus) and spinner (Stenella longirostris) dolphins... Register (78 FR 17639) that a request for a permit to conduct commercial/educational photography had been... photography/filming projects. The first consists of helicopter flights over Florida Bay to film bottlenose...

Cytochrome P450 1A1 expression in cetacean skin biopsies from the Indian Ocean.

PubMed

Jauniaux, Thierry; Farnir, Frédéric; Fontaine, Michaël; Kiszka, Jeremy; Sarlet, Michael; Coignoul, Freddy

2011-06-01

The study describes cytochrome P450 1A1 (CYPA1) expression in the skin of different cetacean species (Megaptera novaeangliae, n=15; Stenella attenuata, n=7 and Stenella longirostris, n=24) from the Mozambique Channel island of Mayotte. Immunohistochemical examination was performed with a monoclonal antibody against scup cytochrome CYPA1. The sex was determined using a molecular approach consisting in the genotyping sex-specific genes. CYPA1 was detected at the junction between epidermis and blubber on dolphins only, mostly in the endothelial cells. Similar observation was obtained in the dermis of one M. novaeangliae. Immunohistochemical slides were scored to evaluate the expression of the CYPA1 and a higher expression was observed in S. longirostris, suggesting a higher exposure to pollutants for this species. The difference of expression between sexes was not significant. Copyright © 2011 Elsevier Ltd. All rights reserved.

Coevolutionary elaboration of pollination-related traits in an alpine ginger (Roscoea purpurea) and a tabanid fly in the Nepalese Himalayas.

PubMed

Paudel, Babu Ram; Shrestha, Mani; Burd, Martin; Adhikari, Subodh; Sun, Yong-Shuai; Li, Qing-Jun

2016-09-01

Geographical variation in the interacting traits of plant-pollinator mutualism can lead to local adaptive differentiation. We tested Darwin's hypothesis of reciprocal selection as a key driving force for the evolution of floral traits of an alpine ginger (Roscoea purpurea) and proboscis length of a tabanid fly (Philoliche longirostris). We documented the pattern of trait variation in R. purpurea and P. longirostris across five populations. At each site, we quantified pollinator-mediated selection on floral display area, inflorescence height and corolla length of R. purpurea by comparing selection gradients for flowers exposed to natural pollination and to supplemental hand pollination. Reciprocal selection between plant and fly was examined at two sites via the relationship between proboscis length and nectar consumption (fly benefit) and corolla length and pollen deposition (plant benefit). Local corolla tube length was correlated with local fly proboscis length among the five sites. We found strong linear selection imposed by pollinators on corolla tube length at all sites, but there was no consistent relationship of fitness to inflorescence height or floral display area. Selection between corolla length and proboscis length was reciprocal at the two experimental sites examined. The geographical pattern of trait variation and the evidence of selection is consistent with a mosaic of local, species-specific reciprocal selection acting as the major driving force for the evolution of corolla length of R. purpurea and proboscis length of P. longirostris. © 2016 The Authors. New Phytologist © 2016 New Phytologist Trust.

Ethanol and (-)-a-pinene: attractant kairomones for some large wood-boring beetles in Southeastern USA

Treesearch

Daniel R. Miller

2006-01-01

Ethanol and a-pinene were tested as attractants for large wood-boring pine beetles in Alabama, Florida, Georgia, North Carolina, and South Carolina in 2002-2004. Multiple-funnel traps baited with (-)-a-pinene (released at about 2 g/d at 25-28°C) were attractive to the following Cerambycidae: Acanthocinus nodosus, A. obsoletus, Arhopalus...

Contiguous allopatry of the masked shrew and southeastern shrew in the Southern Appalachians: segregation along an elevational and habitat gradient

Treesearch

W. Mark Ford; Michael A. Menzel; Timothy S. McCay; Joshua Laerm

2001-01-01

Southeastern shrew. (Sorex longirostris) and masked shrew (Sorex cinereus) distributions converge in the Southern Appalachians. A 306,454-pitfall--trapnight survey in Alabama, Georgia, North Carolina, and South Carolina doc-umented the presence of southeastern shrews in the Cumberland Plateau, Ridge and Valley, Upper Piedmont, and...

50 CFR 218.181 - Permissible methods of taking.

Code of Federal Regulations, 2010 CFR

2010-10-01

... and the indicated number of times: (1) Level B Harassment: (i) Sperm whale (Physeter macrocephalus)—10...); (vii) Spinner dolphin (S. longirostris)—115 (an average of 23 annually); (viii) Melon-headed whale (Peponocephala electra)—10 (an average of 2 annually); (ix) Short-finned pilot whale (Globicephala macrorhynchus...

50 CFR 218.181 - Permissible methods of taking.

Code of Federal Regulations, 2012 CFR

2012-10-01

... and the indicated number of times: (1) Level B Harassment: (i) Sperm whale (Physeter macrocephalus)—10...); (vii) Spinner dolphin (S. longirostris)—115 (an average of 23 annually); (viii) Melon-headed whale (Peponocephala electra)—10 (an average of 2 annually); (ix) Short-finned pilot whale (Globicephala macrorhynchus...

50 CFR 218.181 - Permissible methods of taking.

Code of Federal Regulations, 2011 CFR

2011-10-01

... and the indicated number of times: (1) Level B Harassment: (i) Sperm whale (Physeter macrocephalus)—10...); (vii) Spinner dolphin (S. longirostris)—115 (an average of 23 annually); (viii) Melon-headed whale (Peponocephala electra)—10 (an average of 2 annually); (ix) Short-finned pilot whale (Globicephala macrorhynchus...

Surface elevation dynamics in vegetated Spartina marshes versus unvegetated tidal ponds along the mid-Atlantic coast, USA, with implications to waterbirds

USGS Publications Warehouse

Erwin, R. Michael; Cahoon, Donald R.; Prosser, Diann J.; Sanders, Geoffrey; Hensel, Philippe

2006-01-01

-dependent seaside sparrows Ammodramus maritimus, saltmarsh sharp-tailed sparrows A. caudacutus, black rails Laterallus jamaicensis, clapper rails Rallus longirostris, Forster's terns Sterna forsteri, common terns Sterna hirundo, and gull-billed terns Sterna nilotica. Although short-term inundation of many lagoonal marshes may benefit some open-water feeding ducks, geese, and swans during winter, the long-term ecosystem effects may be detrimental, as wildlife resources will be lost or displaced. With the reduction in area of emergent marsh, estuarine secondary productivity and biotic diversity will also be reduced.

Roles of predation, food, and temperature in structuring the epilimnetic zooplankton populations in Lake Ontario, 1981-1986

USGS Publications Warehouse

Johannsson, Ora E.; O'Gorman, Robert

1991-01-01

We sampled phytoplankton, zooplankton, and alewives Alosa pseudoharengus and measured water temperature in Lake Ontario during 1981–1986. Through the use of general linear regression models we then sought evidence of control of the eplimnetic zooplankton community (mid-July to mid-October) by producers, consumers, and temperature. Our measures of the zooplankton community were total biomass, cladoceran biomass, and the ratio of large to small Daphnia spp. (D. galeata mendotae andD. retrocurva). Zooplankton population variables assessed were abundance, egg ratio, and productivity. Through factor analysis, factors were created from the standardized, transformed independent variables for use in the regression analyses. Regression models showed significant inverse relationships (P < 0.05) between alewives and Bosmina longirostris (abundance, production, and egg ratio), Ceriodaphnia lacustris (egg ratio), andDaphnia retrocurva (egg ratio). Bosmina longirostris and D. retrocurva egg ratios were inversely related to algae biomass (<20 μm), thus the smaller algae might be controlled in part by the zooplankton community. Production of C. lacustris was directly related to temperature, as was the production and abundance of Tropocyclops prasinus. The annual size-frequency distributions of B. longirostris and D. retrocurva were inversely related to yearling alewife abundance and directly related to adult alewife abundance, which suggested that yearlings use a particulate-feeding mode on these zooplankton species more frequently than adults. We found no significant negative correlations among the zooplankton species, which suggested that interzooplankton predation and competition were not as important in structuring the community as were planktivory and temperature.

Epizootic haemorrhagic disease in Italy: vector competence of indigenous Culicoides species and spatial multicriteria evaluation of vulnerability.

PubMed

Federici, Valentina; Ippoliti, Carla; Catalani, Monica; Di Provvido, Andrea; Santilli, Adriana; Quaglia, Michela; Mancini, Giuseppe; Di Nicola, Francesca; Di Gennaro, Annapia; Leone, Alessandra; Teodori, Liana; Conte, Annamaria; Savini, Giovanni

2016-09-30

Epizootic haemorrhagic disease (EHD) is an infectious non-contagious viral disease transmitted by Culicoides, which affects wild and domestic ruminants. The disease has never been reported in Europe, however recently outbreaks of EHD occurred in the Mediterranean Basin. Consequently, the risk that Epizootic haemorrhagic disease virus (EHDV) might spread in Italy cannot be ignored. The aim of this study was to evaluate the risk of EHDV transmission in Italy, in case of introduction, through indigenous potential vectors. In Italy, the most spread and abundant Culicoides species associated to livestock are Culicoides imicola and the members of the Obsoletus complex. Culicoides imicola is a competent vector of EHDV, whereas the vector status of the Obsoletus complex has not been assessed yet. Thus, its oral susceptibility to EHDV was here preliminary evaluated. To evaluate the risk of EHDV transmission a geographical information system-based Multi-Criteria Evaluation approach was adopted. Distribution of vector species and host density were used as predictors of potential suitable areas for EHDV transmission, in case of introduction in Italy. This study demonstrates that the whole peninsula is suitable for the disease, given the distribution and abundance of hosts and the competence of possible indigenous vectors.

Four additional hepatozoon species (Apicomplexa: Hepatozoidae) from north Florida ratsnakes, genus Pantherophis.

PubMed

Telford, Sam R; Moler, Paul E; Butler, Jerry F

2012-09-01

Records from a colubrid host are reported for Hepatozoon horridus, described originally from a viperid snake. Hepatozoon horridus in Pantherophis guttatus (Colubridae) has gamonts 14-18.0 by 4.0-5.5 microm, with length by width (LW) 60-99 microm2, and L/W ratio 2.5-3.9. Spherical to elongate, usually ovoid oocysts with L/W ratio 1.0-3.7 contain 16-160 spherical to usually ovoid sporocysts 15-31 by 14-26 microm, with L/W ratio 1.0-1.4, that contain 5-24 sporozoites. Two additional Hepatozoon species are described from ratsnakes in north Florida. Hepatozoon quadrivittata n. sp. from Pantherophis obsoletus quadrivittatus has gamonts 12-17 by 4-6 microm, LW 56-102 microm2, and L/W ratio 2.6-3.8. Nearly spherical oocysts with L/W 1.0-1.1 contain 5-227 spherical to slightly ovoid sporocysts 20-48 by 19-45 microm, with L/W ratio 1.0-1.4, that contain 13-48 sporozoites. Hepatozoon spiloides n. sp. from Pantherophis obsoletus spiloides forms gamonts 12-15 by 4-5 microm with LW 48-75 microm2 and L/W ratio 2.6-3.5. Occasionally rounded but usually elongate oocysts, with L/W ratio 1.0-2.7, contain 5-21 spherical to elongate sporocysts 28-43 by 18-35 microm, L/W ratio 2.5-3.9. In the distinctive Hepatozoon sp. present in Pantherophis obsoletus spiloides, gamonts are 13-17 by 5-10 microm, with LW 75-140 microm2 and L/W ratio 1.4-3.0. Infected erythrocytes are always distorted and enlarged on average 2.5 times the size of uninfected cells, with nuclei enlarged by one-third and broadly elongated. Gamonts often stained deep blue, and cytoplasm of erythrocytes infected with mature gamonts was always dehemoglobinized. Sporogony could not be obtained in three feedings by hundreds of Aedes aegypti, which usually died within the first 24-48 hr.

Spatial and temporal variation in the abundance of Culicoides biting midges (Diptera: Ceratopogonidae) in nine European countries.

PubMed

Cuéllar, Ana Carolina; Kjær, Lene Jung; Kirkeby, Carsten; Skovgard, Henrik; Nielsen, Søren Achim; Stockmarr, Anders; Andersson, Gunnar; Lindstrom, Anders; Chirico, Jan; Lühken, Renke; Steinke, Sonja; Kiel, Ellen; Gethmann, Jörn; Conraths, Franz J; Larska, Magdalena; Hamnes, Inger; Sviland, Ståle; Hopp, Petter; Brugger, Katharina; Rubel, Franz; Balenghien, Thomas; Garros, Claire; Rakotoarivony, Ignace; Allène, Xavier; Lhoir, Jonathan; Chavernac, David; Delécolle, Jean-Claude; Mathieu, Bruno; Delécolle, Delphine; Setier-Rio, Marie-Laure; Venail, Roger; Scheid, Bethsabée; Chueca, Miguel Ángel Miranda; Barceló, Carlos; Lucientes, Javier; Estrada, Rosa; Mathis, Alexander; Tack, Wesley; Bødker, Rene

2018-02-27

Biting midges of the genus Culicoides (Diptera: Ceratopogonidae) are vectors of bluetongue virus (BTV), African horse sickness virus and Schmallenberg virus (SBV). Outbreaks of both BTV and SBV have affected large parts of Europe. The spread of these diseases depends largely on vector distribution and abundance. The aim of this analysis was to identify and quantify major spatial patterns and temporal trends in the distribution and seasonal variation of observed Culicoides abundance in nine countries in Europe. We gathered existing Culicoides data from Spain, France, Germany, Switzerland, Austria, Denmark, Sweden, Norway and Poland. In total, 31,429 Culicoides trap collections were available from 904 ruminant farms across these countries between 2007 and 2013. The Obsoletus ensemble was distributed widely in Europe and accounted for 83% of all 8,842,998 Culicoides specimens in the dataset, with the highest mean monthly abundance recorded in France, Germany and southern Norway. The Pulicaris ensemble accounted for only 12% of the specimens and had a relatively southerly and easterly spatial distribution compared to the Obsoletus ensemble. Culicoides imicola Kieffer was only found in Spain and the southernmost part of France. There was a clear spatial trend in the accumulated annual abundance from southern to northern Europe, with the Obsoletus ensemble steadily increasing from 4000 per year in southern Europe to 500,000 in Scandinavia. The Pulicaris ensemble showed a very different pattern, with an increase in the accumulated annual abundance from 1600 in Spain, peaking at 41,000 in northern Germany and then decreasing again toward northern latitudes. For the two species ensembles and C. imicola, the season began between January and April, with later start dates and increasingly shorter vector seasons at more northerly latitudes. We present the first maps of seasonal Culicoides abundance in large parts of Europe covering a gradient from southern Spain to northern

The Importance of Zostera marina to a Local Food Web Based on the Analysis of Compound Specific Isotopes in Maquoit Bay, Gulf of Maine

NASA Astrophysics Data System (ADS)

Doolittle, H. A.; Johnson, B. J.; Ambrose, W. G.; Locke, W.; Harris, C. M.

2010-12-01

Zostera marina (also known as eelgrass) is an important primary producer in near shore ecosystems in the Gulf of Maine, providing both habitat and nutrients for a variety of organisms (e.g., crustaceans, polychaetes, gastropods, and fish). The purpose of this study is to use compound specific δ13C analyses of essential amino acids to determine the degree to which organic matter derived from isotopically distinct primary producers (e.g., eelgrass, phytoplankton, and epiphytic algae) contribute to the diets of snails, shrimp, and fish in an eelgrass system in Casco Bay. Maquoit Bay, located in northwestern Casco Bay, in the Gulf of Maine, is a shallow estuarine system that is characterized by silt and clay sized sediments and the presence of extensive eelgrass beds. Amino acid concentrations and δ13C compositions were determined for a variety of sample-types collected in July-August, 2010, from three sites in the study area, including muscle tissue from Tautogolabrus adspersus (cunner), Gasterosteus aculeatus (3-spined stickleback), Nassarius obsoletus (snail), and Mysis spp. (shrimp), seston (i.e., phytoplankton), Z. marina, and epiphytic algae. TFAA amino acid derivatives of the total hydrolyzate were analyzed by GC-FID for amino acid concentration, and by GC-c-IRMS- for carbon isotope composition. Muscle tissue was dominated by glutamic and aspartic acids, and leucine, whereas Zostera marina was dominated by aspartic and glutamic acids, and proline. Phenylalanine and leucine in Z. marina are approximately 10 ‰ enriched in 13C relative to these same amino acids in the seston. The carbon isotope values of these essential amino acids are significantly more enriched in 13C for N. obsoletus than for T. adspersus, G. aculeatus, and Mysis spp. These data suggest that organic matter derived from Z. marina and/or epiphytic algae is more important in the diets of N. obsoletus, and organic matter derived from seston is more important for the diets of T. adspersus, G

Flight and swarming behaviour of Culicoides species (Diptera: Ceratopogonidae) on a livestock farm in Northern Spain.

PubMed

Gonza Lez, Mikel; Alarco N-Elbal, Pedro M; Venter, Gert J; Lo Pez, Sergio

2017-06-30

The efficacy of sweep nets and a CDC white light-suction trap for the sampling of Culicoides species (Diptera: Ceratopogonidae) were compared on a livestock farm in Northern Spain during the Summer of 2013. A total of 6,082 specimens representing 26 species were collected with sweep nets in 4 areas at di erent heights (ground level, 1.5 m, and 3 m), and 8,463 specimens representing 28 species with a single white light trap. Eight species - Culicoides brunnicans, Culicoides punctatus, Culicoides obsoletus/Culicoides scoticus, Culicoides lupicaris, Culcoides picturatus, Culicoides achrayi, and Culicoides simulator - were dominant and accounted for 97.4% and 97.2% of the total specimens collected with both methods, sweep nets, and light traps, respectively. The sex ratios with sweep netting and light trapping were strongly female biased (78.4% and 97.1%, respectively). Nulliparous and parous females were predominantly captured with both methods. A high percentage (17%) of gravid females was, however, captured on manure at ground level while sweeping. Searches for male swarms revealed the presence of several C. punctatus swarms consisting of 26 to 196 males and 3 swarms of C. obsoletus that ranged from 1 to 12 males in size. This study suggested that both methods are suitable and complementary tools for Culicoides sampling.

Evaluation of matrix-assisted laser desorption/ionization time of flight mass spectrometry for the identification of ceratopogonid and culicid larvae.

PubMed

Steinmann, I C; Pflüger, V; Schaffner, F; Mathis, A; Kaufmann, C

2013-03-01

Matrix-assisted laser desorption/ionization time of flight mass spectrometry (MALDI-TOF MS) was evaluated for the rapid identification of ceratopogonid larvae. Optimal sample preparation as evaluated with laboratory-reared biting midges Culicoides nubeculosus was the homogenization of gut-less larvae in 10% formic acid, and analysis of 0.2 mg/ml crude protein homogenate mixed with SA matrix at a ratio of 1:1.5. Using 5 larvae each of 4 ceratopogonid species (C. nubeculosus, C. obsoletus, C. decor, and Dasyhelea sp.) and of 2 culicid species (Aedes aegypti, Ae. japonicus), biomarker mass sets between 27 and 33 masses were determined. In a validation study, 67 larvae belonging to the target species were correctly identified by automated database-based identification (91%) or manual full comparison (9%). Four specimens of non-target species did not yield identification. As anticipated for holometabolous insects, the biomarker mass sets of adults cannot be used for the identification of larvae, and vice versa, because they share only very few similar masses as shown for C. nubeculosus, C. obsoletus, and Ae. japonicus. Thus, protein profiling by MALDI-TOF as a quick, inexpensive and accurate alternative tool is applicable to identify insect larvae of vector species collected in the field.

Bluetongue disease in Germany (2007-2008): monitoring of entomological aspects.

PubMed

Mehlhorn, Heinz; Walldorf, Volker; Klimpel, Sven; Schaub, Günter; Kiel, Ellen; Focke, René; Liebisch, Gabriele; Liebisch, Arndt; Werner, Doreen; Bauer, Christian; Clausen, Henning; Bauer, Burkhard; Geier, Martin; Hörbrand, Thomas; Bätza, Hans-Joachim; Conraths, Franz J; Hoffmann, Bernd; Beer, Martin

2009-08-01

In the summer of 2006, a bluetongue epidemic started in the border area of Belgium, The Netherlands, and Germany, spread within 2 years over large areas of Western and Central Europe, and caused substantial losses in farm ruminants. Especially sheep and cattle were severely affected, leading to a case-fatality ratio of nearly 40% in sheep (Conraths et al., Emerg Inf Dis 15(3):433-435, 2009). The German federal ministry of food, agriculture, and consumer protection (BMELV) established a countrywide monitoring on the occurrence of the vectors of this virus, i.e., midges (family Ceratopogonidae) of the genus Culicoides. The monitoring was done on 91 sites, most of which were localized in the 150-km restriction zone that existed in December 2006. A grid consisting of 45 x 45 km(2) cells was formed that covered the monitoring area. As a rule, one trap was placed into each grid cell. The monitoring program started at the end of March 2007 and lasted until May 2008. It included the catching of midges by ultraviolet light traps-done each month from days 1 until 8, the selection of midges of the Culicoides obsoletus, Culicoides pulicaris group, and other Culicoides spp., the testing of midges for bluetongue virus (BTV) by polymerase chain reaction (PCR), and the daily registration of weather data at each trap site for the whole monitoring period. The following main results were obtained: (1) Members of the C. obsoletus group were most commonly found in the traps, reaching often 3/4 of the catches. The African and South European vector of BTV-the species Culicoides imicola-was never found. (2) Members of the C. obsoletus group were most frequently found infected with BTV besides a few cases in the C. pulicaris group and other species. (3) Members of the C. obsoletus group were also found in winter. Their numbers were reduced, however, and they were caught mostly close to stables. Therefore, a true midge-free period does not exist during the year in Germany. (4) The amounts

Habitat preferences of a corallivorous reef fish: predation risk versus food quality

NASA Astrophysics Data System (ADS)

Brooker, R. M.; Munday, P. L.; Mcleod, I. M.; Jones, G. P.

2013-09-01

Many animals preferentially select a habitat from a range of those potentially available. However, the consequences of these preferences for distribution and abundance, and the underlying basis of habitat preferences are often unknown. The present study, conducted at Great Keppel Island, Australia, examined how distribution and abundance of an obligate corallivorous filefish, Oxymonacanthus longirostris, relates to coral architecture and diversity. The main drivers of the distribution and abundance of O. longirostris among reefs were coral species richness and availability of branching coral. Feeding territories had a higher percentage of Acropora coral than surrounding habitat. In addition, feeding territories had a higher percentage of the structurally important branching coral, Acropora nobilis, and a primary prey species, Acropora millepora. A series of pair-wise choice experiments in which both structural complexity and coral tissue quality were independently manipulated showed that habitat choice was primarily based on structural complexity and shelter characteristics. In addition, the choice for the preferred coral ( A. nobilis) was stronger in the presence of a piscivorous fish. These results indicate that species-diverse coral habitats, which provide sufficient structural complexity along with nutritionally important prey, are essential for population persistence of this small, corallivorous reef fish.

Development of Automated Whistle and Click Classifiers for Odontocete Species in the Northwest Atlantic Ocean and the Waters Surrounding the Hawaiian Islands

DTIC Science & Technology

2014-09-30

confirmation of species identity. Species Number of encounters Delphinus delphis 9 Grampus griseus 8 Globicephala macrorhynchus 17 Steno ...Globicephala macrorhynchus 30 Steno bredanensis 30 Stenella coeruleoalba 31 Stenella longirostris 9 Peponocephala electra 17 Grampus griseus 9...2 (287) 15 (25410) 17 25697 Grampus griseus 2 (15) 6 (143) - 8 158 Steno bredanensis 1 (9) 1 (416) 1 (85) 3 510 Delphinus delphis 4 (301) 5 (1651

The effect of a topical insecticide containing permethrin on the number of Culicoides midges caught near horses with and without insect bite hypersensitivity in the Netherlands.

PubMed

de Raat, I J; van den Boom, R; van Poppel, M; van Oldruitenborgh-Oosterbaan, M M Sloet

2008-10-15

Insect bite hypersensitivity (IBH) in horses is most likely caused by Culicoides species, although other insects may also play a role. Until now no effective cure has been found for this condition, although numerous therapeutic and preventive measures have been used to control insect hypersensitivity. One such method is to apply a topical insecticide to horses. In this study, the effect of a topical insecticide containing permethrin (3.6%) was examined in seven pairs of horses. The horses were placed inside a tent trap to collect Culicoides spp. and other insects attracted to the horses on two subsequent evenings. On the first evening, both horses were untreated. After the end of this session, one horse of each pair was treated with the pour-on insecticide; treated horses were kept separate from untreated horses. The next evening the pairs of horses were again placed inside the tent trap and insects were collected. Similar percentages of Culicoides were trapped as in earlier studies (C. obsoletus 95.34% and C. pulicaris 4.54%), with healthy horses attracting more Culicoides than horses affected by IBH. The number of Culicoides, the percentage of blood-fed Culicoides obsoletus, and the total number of insects attracted to horses 24 hours after treatment with permethrin were reduced but the reduction was not statistically significant. No negative side effects of permethrin administration were observed.

DEET (N,N-diethyl-meta-toluamide)/PMD (para-menthane-3,8-diol) repellent-treated mesh increases Culicoides catches in light traps.

PubMed

Murchie, A K; Clawson, S; Rea, I; Forsythe, I W N; Gordon, A W; Jess, S

2016-09-01

Biting midges (Culicoides spp.) are vectors of bluetongue and Schmallenberg viruses. Treatment of mesh barriers is a common method for preventing insect-vectored diseases and has been proposed as a means of limiting Culicoides ingression into buildings or livestock transporters. Assessments using animals are costly, logistically difficult and subject to ethical approval. Therefore, initial screening of test repellents/insecticides was made by applying treatments to mesh (2 mm) cages surrounding Onderstepoort light traps. Five commercial treatments were applied to cages as per manufacturers' application rates: control (water), bendiocarb, DEET/p-menthane-3,8-diol (PMD) repellent, Flygo (a terpenoid based repellent) and lambda-cyhalothrin. The experimental design was a 5 × 5 Latin square, replicated in time and repeated twice. Incongruously, the traps surrounded by DEET/PMD repellent-treated mesh caught three to four times more Obsoletus group Culicoides (the commonest midge group) than the other treatments. A proposed hypothesis is that Obsoletus group Culicoides are showing a dose response to DEET/PMD, being attracted at low concentrations and repelled at higher concentrations but that the strong light attraction from the Onderstepoort trap was sufficient to overcome close-range repellence. This study does not imply that DEET/PMD is an ineffective repellent for Culicoides midges in the presence of an animal but rather that caution should be applied to the interpretation of light trap bioassays.

Effect of light, prey density, and prey type on the feeding rates of Hemimysis anomala

USGS Publications Warehouse

Halpin, Kathleen E.; Boscarino, Brent T.; Rudstam, Lars G.; Walsh, Mureen G.; Lantry, Brian F.

2013-01-01

Hemimysis anomala is a near-shore mysid native to the Ponto-Caspian region that was discovered to have invaded Great Lakes ecosystems in 2006. We investigated feeding rates and prey preferences of adult and juvenile Hemimysis in laboratory experiments to gain insight on the potential for Hemimysis to disrupt food webs. For both age groups (AGs), we measured feeding rates as a function of prey abundance (Bosmina longirostris as prey), prey type (B. longirostris, Daphnia pulex, and Mesocyclops sp.), and light levels (no light and dim light). Mean feeding rates on Bosmina increased with prey density and reached 23 ind. (2 h)−1 for adults and 17 ind. (2 h)−1 for juveniles. Dim light had little effect on prey selection or feeding rate compared to complete darkness. When feeding rates on alternate prey were compared, both AGs fed at higher rates on Bosmina than Daphnia, but only juveniles fed at significantly higher rates on Bosmina relative to Mesocyclops. No significant differences were observed between feeding rates on Mesocyclops and on Daphnia. Hemimysis feeding rates were on the order of 30–60% of their body weight per day, similar to predatory cladocerans that have been implicated in zooplankton declines in Lakes Huron and Ontario.

Variation in acoustic behavior of delphinids in the Pacific Ocean based on school size and species composition

NASA Astrophysics Data System (ADS)

Rankin, Shannon; Barlow, Jay

2005-04-01

Variation in acoustic behavior based on school size and species composition was examined for surveys in the eastern tropical Pacific (2000), along the U.S. West Coast (2001), and in the U.S. EEZ surrounding Hawaii (2002). Sounds were monitored using a towed hydrophone array, and vocal schools were defined as those producing any combination of whistles, burst pulses, and/or echolocation clicks. Delphinid schools containing mixed species were consistently more vocal than single species schools. Vocal schools of Stenella attenuata, S. longirostris, Delphinus delphis, and Lissodelphis borealis were significantly larger than non-vocal schools. Vocal schools of Tursiops truncatus and Grampus griseus were somewhat larger than non-vocal schools, although this relationship was not significant. There was no relationship between group size and vocal activity for S. coeruleoalba, Steno bredanensis, and Globicephala spp. For species without a strong group size effect, all but T. truncatus were more vocal in the Hawaiian waters. The ability to use acoustic techniques in dolphin population estimation depends on their effectiveness in consistently detecting dolphin schools. This study suggests that small single-species schools of S. attenuata, S. longirostris, D. delphis, and L. borealis are more likely to be missed during acoustic monitoring in these regions.

Activity of Culicoides spp. (Diptera: Ceratopogonidae) inside and outside of livestock stables in late winter and spring.

PubMed

Kameke, Daniela; Kampen, Helge; Walther, Doreen

2017-03-01

Culicoides Latreille, 1809 midge species are the putative vectors of Bluetongue virus (BTV) and Schmallenberg virus (SBV) in Europe. To gain a better understanding of the epidemiology of the diseases, basic knowledge about the overwintering of the vectors is needed. Therefore, we investigated culicoid activity in relation to air temperature at livestock stables during late winter and spring season. Ceratopogonids were captured weekly indoors and outdoors on three cattle farms, three horse farms and one sheep farm in the federal state of Brandenburg, Germany between January and May, 2015 by BG-Sentinel UV-light suction traps. First seasonal activity was measured inside a sheep barn and cattle stables in mid-March, suggesting the existence of a preceding vector-free period. The first species at all trapping sites were members of the Obsoletus Complex followed by Culicoides punctatus (Meigen), 1804 and Culicoides pulicaris (Linnaeus), 1758 simultaneously. In total, 160 collections were made, including 3465 Culicoides specimens with 2790 (80.6%) of them being members of the Obsoletus Complex. The remaining 675 individuals belonged to six other culicoid species. 59.8% of all Culicoides were collected indoors, and almost five times as many midges were sampled on cattle farms as on horse farms. Cattle farms harboured seven species while only two species were found on the horse and the sheep farms, respectively. Temperatures, husbandry practises and the presence/quality of potential breeding sites might be responsible for the difference in species and numbers of caught specimens between livestock holdings.

Bermuda as an Evolutionary Life Raft for an Ancient Lineage of Endangered Lizards

PubMed Central

Brandley, Matthew C.; Wang, Yuezhao; Guo, Xianguang; Nieto Montes de Oca, Adrián; Fería Ortíz, Manuel; Hikida, Tsutomu; Ota, Hidetoshi

2010-01-01

Oceanic islands are well known for harboring diverse species assemblages and are frequently the basis of research on adaptive radiation and neoendemism. However, a commonly overlooked role of some islands is their function in preserving ancient lineages that have become extinct everywhere else (paleoendemism). The island archipelago of Bermuda is home to a single species of extant terrestrial vertebrate, the endemic skink Plestiodon (formerly Eumeces) longirostris. The presence of this species is surprising because Bermuda is an isolated, relatively young oceanic island approximately 1000 km from the eastern United States. Here, we apply Bayesian phylogenetic analyses using a relaxed molecular clock to demonstrate that the island of Bermuda, although no older than two million years, is home to the only extant representative of one of the earliest mainland North American Plestiodon lineages, which diverged from its closest living relatives 11.5 to 19.8 million years ago. This implies that, within a short geological time frame, mainland North American ancestors of P. longirostris colonized the recently emergent Bermuda and the entire lineage subsequently vanished from the mainland. Thus, our analyses reveal that Bermuda is an example of a “life raft” preserving millions of years of unique evolutionary history, now at the brink of extinction. Threats such as habitat destruction, littering, and non-native species have severely reduced the population size of this highly endangered lizard. PMID:20614024

Bermuda as an evolutionary life raft for an ancient lineage of endangered lizards.

PubMed

Brandley, Matthew C; Wang, Yuezhao; Guo, Xianguang; Nieto Montes de Oca, Adrián; Fería Ortíz, Manuel; Hikida, Tsutomu; Ota, Hidetoshi

2010-06-30

Oceanic islands are well known for harboring diverse species assemblages and are frequently the basis of research on adaptive radiation and neoendemism. However, a commonly overlooked role of some islands is their function in preserving ancient lineages that have become extinct everywhere else (paleoendemism). The island archipelago of Bermuda is home to a single species of extant terrestrial vertebrate, the endemic skink Plestiodon (formerly Eumeces) longirostris. The presence of this species is surprising because Bermuda is an isolated, relatively young oceanic island approximately 1000 km from the eastern United States. Here, we apply Bayesian phylogenetic analyses using a relaxed molecular clock to demonstrate that the island of Bermuda, although no older than two million years, is home to the only extant representative of one of the earliest mainland North American Plestiodon lineages, which diverged from its closest living relatives 11.5 to 19.8 million years ago. This implies that, within a short geological time frame, mainland North American ancestors of P. longirostris colonized the recently emergent Bermuda and the entire lineage subsequently vanished from the mainland. Thus, our analyses reveal that Bermuda is an example of a "life raft" preserving millions of years of unique evolutionary history, now at the brink of extinction. Threats such as habitat destruction, littering, and non-native species have severely reduced the population size of this highly endangered lizard.

Species differences in the sensitivity of avian embryos to methylmercury

USGS Publications Warehouse

Heinz, G.H.; Hoffman, D.J.; Klimstra, J.D.; Stebbins, K.R.; Kondrad, S.L.; Erwin, C.A.

2009-01-01

We injected doses of methylmercury into the air cells of eggs of 26 species of birds and examined the dose-response curves of embryo survival. For 23 species we had adequate data to calculate the median lethal concentration (LC50). Based on the dose-response curves and LC50s, we ranked species according to their sensitivity to injected methylmercury. Although the previously published embryotoxic threshold of mercury in game farm mallards (Anas platyrhynchos) has been used as a default value to protect wild species of birds, we found that, relative to other species, mallard embryos are not very sensitive to injected methylmercury; their LC50 was 1.79 ug/g mercury on a wet-weight basis. Other species we categorized as also exhibiting relatively low sensitivity to injected methylmercury (their LC50s were 1 ug/g mercury or higher) were the hooded merganser (Lophodytes cucullatus), lesser scaup (Aythya affinis), Canada goose (Branta canadensis), double-crested cormorant (Phalacrocorax auritus), and laughing gull (Larus atricilla). Species we categorized as having medium sensitivity (their LC50s were greater than 0.25 ug/g mercury but less than 1 ug/g mercury) were the clapper rail (Rallus longirostris), sandhill crane (Grus canadensis), ring-necked pheasant (Phasianus colchicus), chicken (Gallus gallus), common grackle (Quiscalus quiscula), tree swallow (Tachycineta bicolor), herring gull (Larus argentatus), common tern (S terna hirundo), royal tern (Sterna maxima), Caspian tern (Sterna caspia), great egret (Ardea alba), brown pelican (Pelecanus occidentalis), and anhinga (Anhinga anhinga). Species we categorized as exhibiting high sensitivity (their LC50s were less than 0.25 ug/g mercury) were the American kestrel (Falco sparverius), osprey (Pandion haliaetus), white ibis (Eudocimus albus), snowy egret (Egretta thula), and tri-colored heron (Egretta tricolor). For mallards, chickens, and ring-necked pheasants (all species for which we could compare the toxicity of our

Spatial and temporal distribution of Culicoides species in mainland Portugal (2005-2010). Results of the Portuguese Entomological Surveillance Programme.

PubMed

Ribeiro, Rita; Wilson, Anthony J; Nunes, Telmo; Ramilo, David W; Amador, Rita; Madeira, Sara; Baptista, Filipa M; Harrup, Lara E; Lucientes, Javier; Boinas, Fernando

2015-01-01

Bluetongue virus (BTV) is transmitted by Culicoides biting midges and causes an infectious, non-contagious disease of ruminants. It has been rapidly emerging in southern Europe since 1998. In mainland Portugal, strains of BTV belonging to three serotypes have been detected: BTV-10 (1956-1960), BTV-4 (2004-2006 and 2013) and BTV-1 (2007-2012). This paper describes the design, implementation and results of the Entomological Surveillance Programme covering mainland Portugal, between 2005 and 2010, including 5,650 caches. Culicoides imicola Kieffer was mostly found in central and southern regions of Portugal, although it was sporadically detected in northern latitudes. Its peak activity occurred in the autumn and it was active during the winter months in limited areas of the country. Obsoletus group was present at the highest densities in the north although they were found throughout the country in substantial numbers. Culicoides activity occurred all year round but peaked in the spring. A generalized linear mixed model was developed for the analysis of the environmental factors associated with activity of the species of Culicoides suspected vectors of BTV in the country. For C. imicola Kieffer, the most important variables were month, diurnal temperature range (DTR), the number of frost days (FRS) and median monthly temperature (TMP). For the Obsoletus group, the most important factors were month, diurnal temperature range (DTR), and linear and quadratic terms for median monthly temperature (TMP). The results reported can improve our understanding of climatic factors in Culicoides activity influencing their distribution and seasonal pattern.

Spatial and Temporal Distribution of Culicoides Species in Mainland Portugal (2005–2010). Results of the Portuguese Entomological Surveillance Programme

PubMed Central

Ramilo, David W.; Amador, Rita; Madeira, Sara; Baptista, Filipa M.; Harrup, Lara E.; Lucientes, Javier; Boinas, Fernando

2015-01-01

Bluetongue virus (BTV) is transmitted by Culicoides biting midges and causes an infectious, non-contagious disease of ruminants. It has been rapidly emerging in southern Europe since 1998. In mainland Portugal, strains of BTV belonging to three serotypes have been detected: BTV-10 (1956-1960), BTV-4 (2004-2006 and 2013) and BTV-1 (2007-2012). This paper describes the design, implementation and results of the Entomological Surveillance Programme covering mainland Portugal, between 2005 and 2010, including 5,650 caches. Culicoides imicola Kieffer was mostly found in central and southern regions of Portugal, although it was sporadically detected in northern latitudes. Its peak activity occurred in the autumn and it was active during the winter months in limited areas of the country. Obsoletus group was present at the highest densities in the north although they were found throughout the country in substantial numbers. Culicoides activity occurred all year round but peaked in the spring. A generalized linear mixed model was developed for the analysis of the environmental factors associated with activity of the species of Culicoides suspected vectors of BTV in the country. For C. imicola Kieffer, the most important variables were month, diurnal temperature range (DTR), the number of frost days (FRS) and median monthly temperature (TMP). For the Obsoletus group, the most important factors were month, diurnal temperature range (DTR), and linear and quadratic terms for median monthly temperature (TMP). The results reported can improve our understanding of climatic factors in Culicoides activity influencing their distribution and seasonal pattern. PMID:25906151

The influence of thermal biology on road mortality risk in snakes.

PubMed

Mccardle, Logan D; Fontenot, Clifford L

2016-02-01

Road mortality is a significant threat to terrestrial vertebrates in many areas, and the novel thermal environment of black-topped roads may represent ecological traps for some species and demographic groups. We investigated the relationship between ambient temperature and on-road detection in a snake assemblage in southeastern Louisiana by comparing observations of live snakes on a black-topped road, across measurements of air temperature and road temperature on survey days. Analyses indicated on-road detection of snakes was significantly influenced by ambient temperature conditions for five snake species. Additionally, road temperatures, and the difference between air and road temperatures, were strong drivers of on-road snake detections. Permutation analysis methods revealed that significant temperature related group (species or sex) structure exists in occurrences of snakes on the roadway, and that road temperature was the strongest driver of species differences. We also compared how air and road temperatures affected occurrence on the road between sexes in the colubrid snakes Nerodia fasciata, Nerodia cyclopion, Thamnophis proximus, and Pantherophis obsoletus. Males and females of the viviparous species N. fasciata, N. cyclopion, and T. proximus diverged significantly in temperature preferences, with females found under warmer conditions, while males and females of the oviparous species P. obsoletus did not. Road temperature was also the strongest driver of differences between sexes. Our results indicate that black-topped roads are an ecological trap that is heavily influenced by sex, reproductive condition, and species specific thermoregulatory requirements, particularly for viviparous species. Copyright © 2015 Elsevier Ltd. All rights reserved.

[Diet composition and seasonal variation in feeding habits of Collichthy lucidus in Yangtze Estuary, China].

PubMed

Wang, Jian-feng; Zhao, Feng; Song, Chao; Yang, Gang; Hou, Jun-li; Zhuang, Ping

2016-01-01

Spiny head croaker (Collichthy lucidus) is an important bottom fish distributing from the East China Sea to the Yellow Sea. In order to investigate the seasonal variation in diet composition and feeding habits, a total of 270 specimens were collected in the Yangtze Estuary from November, 2013 to August, 2014, and analyzed by using the stomach contents analysis method. The importance of different prey items was evaluated by the frequency of occurrence, abundance and mass followed by using these data to calculate the index of relative importance (IRI) and the index of preponderance (Ip) for each taxonomic category. The results showed that the diet of C. lucidus consisted of 30 species belonging to 8 orders, in which shrimps, with 38.5 IRI% and 79.1 Ip values, was the most important prey species. The followings were Mysidacea and Amphipoda. The dominant species in the diet of C. lucidus were Palaemon gravieri, Exopalaemon annandalei, E. carinicauda, Acanthomysis longirostris, A. brevirostris, Synidotea laevidorsalis and Calanus sinicus. The dominant species in the diet varied in different seasons. P. gravieri, E. annandalei and A. brevirostris were dominant species in spring and summer, A. longirostris, A. brevirostris and E. carinicauda in autumn, and P. gravieri, C. sinicus and Pesudeuphausia sinica in winter. There was 10.4% of total samples with empty stomachs, and the highest percent appeared in winter, and the lowest in autumn. The mean stomach fullness index of the whole samples was 0.6%, with the highest found in spring, the lowest in winter, indicating the feeding activity of C. lucidus varied significantly among seasons.

Community analysis of the abundance and diversity of biting midge species (Diptera: Ceratopogonidae) in three European countries at different latitudes.

PubMed

Möhlmann, Tim W R; Wennergren, Uno; Tälle, Malin; Favia, Guido; Damiani, Claudia; Bracchetti, Luca; Takken, Willem; Koenraadt, Constantianus J M

2018-03-27

The outbreaks of bluetongue and Schmallenberg disease in Europe have increased efforts to understand the ecology of Culicoides biting midges and their role in pathogen transmission. However, most studies have focused on a specific habitat, region, or country. To facilitate wider comparisons, and to obtain a better understanding of the spread of disease through Europe, the present study focused on monitoring biting midge species diversity in three different habitat types and three countries across Europe. Biting midges were trapped using Onderstepoort Veterinary Institute light traps at a total of 27 locations in Sweden, the Netherlands and Italy, comprising farm, peri-urban and wetland habitats. From July 2014 to June 2015 all locations were sampled monthly, except for during the winter months. Trapped midges were counted and identified morphologically. Indices on species richness, evenness and diversity were calculated. Community compositions were analysed using non-metric multidimensional scaling (NMDS) techniques. A total of 50,085 female midges were trapped during 442 collection nights. More than 88% of these belonged to the Obsoletus group. The highest midge diversity was found in Sweden, while species richness was highest in the Netherlands, and most specimens were trapped in Italy. For habitats within countries, diversity of the trapped midges was lowest for farms in all countries. Differences in biting midge species communities were more distinct across the three countries than the three habitat types. A core midge community could be identified, in which the Obsoletus group was the most abundant. Variations in vector communities across countries imply different patterns of disease spread throughout Europe. How specific species and their associated communities affect disease risk is still unclear. Our results emphasize the importance of midge diversity data at community level, how this differs across large geographic range within Europe, and its implications

Pachybrachis (Coleoptera, Chrysomelidae, Cryptocephalinae) of Eastern Canada

PubMed Central

Barney, Robert J.; LeSage, Laurent; Savard, Karine

2013-01-01

Abstract Seventeen Pachybrachis species occurring in eastern Canada [Ontario (ON), Québec (QC), New Brunswick (NB), Nova Scotia (NS), and Prince Edward Island (PE)] are treated by the authors. Two new national records were discovered, both from southernmost Ontario: P. cephalicus Fall and P. luctuosus Suffrian. Four species were new provincial records: P. cephalicus (ON), P. luctuosus (ON, QC), P. obsoletus Suffrian (NB), P. peccans (PE). A fully illustrated key to the Pachybrachis of eastern Canada is provided and supported with extensive photographs, distribution maps, and plant associations. Three species were distributed from southern Ontario into at least one province in the Maritimes (P. nigricornis (Say), P. obsoletus Suffrianand P. peccans Suffrian). Six species were distributed along the shores of the Great Lakes (Erie, Michigan, and Ontario) and rivers (Ottawa, Saguenay and St. Lawrence), but unknown from central and northern ON and QC (P. bivittatus (Say), P. hepaticus hepaticus (F. E. Melsheimer), P. othonus othonus (Say), P. pectoralis (F. E. Melsheimer), P. spumarius Suffrianand P. trinotatus (F. E. Melsheimer)). Seven species were rare, five being found exclusively from southern ON (P. calcaratus Fall, P. cephalicus, P. luridus (Fabricius), P. subfasciatus (J. E. LeConte)and P. tridens (F. E. Melsheimer)), with two having, in addition, a disjunct population in QC (P. atomarius (F. E. Melsheimer)and P. luctuosus). One species was found to be the northern most extension of an eastern United States (US) distribution into the eastern townships of QC (P. m-nigrum (F. E. Melsheimer)). There were no Pachybrachis that could be considered arctic, subarctic, or boreal species; no specimens were found from Labrador and Newfoundland, and all species had southern affinities. Pachybrachis atomarius, P. calcaratus, P. luridus, P. subfaciatus, and P. tridens, not seen over the last 30–70 years, may be extirpated from eastern Canada. PMID:24163583

Biochemical composition of deep-sea decapod crustaceans with two different benthic life strategies off the Portuguese south coast

NASA Astrophysics Data System (ADS)

Rosa, R.; Nunes, M. L.

2003-01-01

The objectives of the present study were to characterize the benthic life strategies of Aristeus antennatus (Crustacea: Penaeidea), Parapenaeus longirostris (Crustacea: Penaeidea) and Nephrops norvegicus (Crustacea: Astacidea) on the basis of biochemical composition (proximate chemical composition, total lipids, glycogen and cholesterol contents), and its response to biological and environmental factors (sex, maturation, reproduction, food availability and depth) into account. The specimens were collected at depths between 200 and 600 m off the Portuguese south coast (Algarve). The nektobenthic species ( A. antennatus and P. longirostris) showed higher protein, lipid, cholesterol and glycogen contents, and lower moisture content in the muscle than the benthic-endobenthic species ( N. norvegicus). Consequently, the energy content of the nektobenthic species was also higher. Principal component analyses were used to assess the relationship between the different biochemical contents and to relate them to the biotic and abiotic factors. Depth seems to have the most important role in the observed trends of the biochemical composition. The increase of the ovarian lipid levels occurs as a result of the maturation process. The highest values were obtained in mature N. norvegicus females. The differences can be due to maternal investment (lipid metabolism of the female is geared to the provision of egg lipid), since N. norvegicus produce large lecithotrophic eggs. The biochemical differences observed in the three species did not seem to be due to distinct trophic strategies, but instead were a consequence of depth, which may have a significant interspecific effect on food intake. It was also evident that reproductive cycle has profound effects upon the biochemistry of the three species. Gonadal maturation has large associated energy costs due to the increase in biosynthetic work. Moreover, the biochemical composition would be influenced by or synchronized with seasonal

Organochlorine residues in odontocete species from the southeast coast of India.

PubMed

Karuppiah, S; Subramanian, A; Obbard, J P

2005-08-01

Blubber from bottle-nose dolphins, spinner dolphins, humpback dolphin (Tursiops truncatus, Stenella longirostris and Sousa chinensis) were collected from the Bay of Bengal (southeast coast of India) and analyzed for the organochlorine pesticides hexachlorocyclohexane (HCHs), p,p'-dichlorodiphenyl trichloroethane (DDTs), and polychlorinated biphenyls (PCBs). All nine specimens analyzed contained considerable levels of all the three chemical classes where DDT was in the range of 3330-23330 ng/g; HCHs in the range of 95-765 ng/g; and PCBs in the range of 210-1220 ng/g (wet weight basis). The reasons for this and the variations in the isomer pattern of HCHs and DDT and its metabolites in marine mammal tissues are discussed.

Two new species of Pseudochristianella Campbell & Beveridge, 1990 (Cestoda: Trypanorhyncha) from elasmobranch fishes from the Gulf of California, Mexico.

PubMed

Campbell, R A; Beveridge, I

2006-12-01

Pseudochristionella elegantissima sp. nov. (Cestoda: Trypanorhyncha) is described from the spiral valves of the rays Dasyatis brevis (Garman, 1880) and D. longus (Garman, 1880), from the Gulf of California, Mexico. Also described is P. nudisculo sp. nov. from rays Rhinobatos productus Ayres, 1854, D. longus, Myliobatis longirostris Applegate & Fitch, 1964 and Zapteryx exasperat (Jordan & Gilbert, 1880) from the same location. The species are distinguished from one another and from the only existing species within the genus, P. southwelli Campbel & Beveridge, 1990, by differences in the arrangement of bill-hooks on the external surface of the basal swelling of the tentacle and by the number of hooks in each row of the metabasasl armature.

Biting Midges of the Genus Culicoides in South Carolina Zoos

PubMed Central

Nelder, Mark P.; Swanson, Dustin A.; Adler, Peter H.; Grogan, William L.

2010-01-01

Biting midges of the genus Culicoides (Diptera: Ceratopogonidae) were collected during the summer of 2007 at the Greenville and Riverbanks Zoos in South Carolina with Centers for Disease Control and Prevention (CDC) traps equipped with ultraviolet or incandescent lights and baited with carbon dioxide. Sixteen species of Culicoides were collected, four of which represented more than 80%. They were Culicoides guttipennis (Coquillett), Culicoides mulrenanni Beck, Culicoides obsoletus (Meigen), and Culicoides sanguisuga (Coquillett). C. guttipennis was found on a dead colobus monkey and a dead golden-headed lion tamarin; Culicoides husseyi Wirth & Blanton was collected from an unidentified, abandoned bird's nest. Ultraviolet light-equipped traps captured significantly more Culicoides specimens than traps with incandescent light. Half of the collected species previously have been associated with vertebrate pathogens, indicating a potential risk to captive animals. PMID:20569132

Physiological responses of Chinese longsnout catfish to water temperature

NASA Astrophysics Data System (ADS)

Han, Dong; Xie, Shouqi; Zhu, Xiaoming; Yang, Yunxia

2011-05-01

We evaluated the effect of water temperature on the growth and physiology of the Chinese longsnout catfish ( Leiocassis longirostris Günther). The fish were reared at four temperatures (20, 25, 30, and 35°C) and sampled on days 7, 20, and 30. We measured plasma levels of insulin, free thyroxine (FT4), free 3,5,3'-triiodothyronine (FT3), lysozyme and leukocyte phagocytic activity. The optimum water temperature for growth was 27.7°C. The plasma levels of insulin and FT4 declined significantly ( P<0.05) on day 30 at temperatures above 20°C. Lysozyme activity was significantly ( P<0.05) lower at 25°C than at other temperatures. We conclude that final weight, insulin, FT4, and lysozyme were significantly affected by water temperature.

Proximate and ultimate aspects of acoustic and multimodal communication in butterflyfishes

NASA Astrophysics Data System (ADS)

Boyle, Kelly S.

Communication in social animals is shaped by natural selection on both sender and receiver. Diurnal butterflyfishes use a combination of visual cues like bright color patterns and motor pattern driven displays, acoustic communication, and olfactory cues that may advertise territorial behavior, facilitate recognition of individuals, and provide cues for courtship. This dissertation examines proximate and multimodal communication in several butterflyfishes, with an emphasis on acoustic communication which has recently garnered attention within the Chaetodontidae. Sound production in the genus Forcipiger involves a novel mechanism with synchronous contractions of opposing head muscles at the onset of sound emission and rapid cranial rotation that lags behind sound emission. Acoustic signals in F. flavissimus provide an accurate indicator of body size, and to a lesser extent cranial rotation velocity and acceleration. The closely related Hemitaurichthys polylepis produces rapid pulse trains of similar duration and spectral content to F. flavissimus, but with a dramatically different mechanism which involves contractions of hypaxial musculature at the anterior end of the swim bladder that occur with synchronous muscle action potentials. Both H. polylepis sonic and hypaxial trunk muscle fibers have triads at the z-line, but sonic fibers have smaller cross-sectional areas, more developed sarcoplasmic reticula, longer sarcomere lengths, and wider t-tubules. Sonic motor neurons are located along a long motor column entirely within the spinal cord and are composed of large and small types. Forcipiger flavissimus and F. longirostris are site attached and territorial, with F. flavissimus engaged in harem polygyny and F. longirostris in social monogamy. Both produce similar pulse sounds to conspecifics during territoriality that vary little with respect to communicative context. Chaetodon multicinctus can discriminate between mates and non-mate intruders, but require combined

Geographic variations in the whistles of spinner dolphins (Stenella longirostris) of the Main Hawai‵ian Islands

NASA Astrophysics Data System (ADS)

Bazúa-Durán, Carmen; Au, Whitlow W. L.

2004-12-01

Geographic variations in the whistles of Hawai‵ian spinner dolphins are discussed by comparing 27 spinner dolphin pods recorded in waters off the Islands of Kaua‵i, O‵ahu, Lana‵i, and Hawai‵i. Three different behavioral states, the number of dolphins observed in each pod, and ten parameters extracted from each whistle contour were considered by using clustering and discriminant function analyses. The results suggest that spinner dolphin pods in the Main Hawai‵ian Islands share characteristics in approximately 48% of their whistles. Spinner dolphin pods had similar whistle parameters regardless of the island, location, and date when they were sampled and the dolphins' behavioral state and pod size. The term ‵‵whistle-specific subgroup'' (WSS) was used to designate whistle groups with similar whistles parameters (which could have been produced in part by the same dolphins). The emission rate of whistles was higher when spinner dolphins were socializing than when they were traveling or resting, suggesting that whistles are mainly used during close-range interactions. Spinner dolphins also seem to vary whistle duration according to their general behavioral state. Whistle duration and the number of turns and steps of a whistle may be more important in delivering information at the individual level than whistle frequency parameters. .

Passive acoustic monitoring of coastally associated Hawaiian spinner dolphins, Stenella longirostris, ground-truthed through visual surveys.

PubMed

Heenehan, Heather L; Tyne, Julian A; Bejder, Lars; Van Parijs, Sofie M; Johnston, David W

2016-07-01

Effective decision making to protect coastally associated dolphins relies on monitoring the presence of animals in areas that are critical to their survival. Hawaiian spinner dolphins forage at night and rest during the day in shallow bays. Due to their predictable presence, they are targeted by dolphin-tourism. In this study, comparisons of presence were made between passive acoustic monitoring (PAM) and vessel-based visual surveys in Hawaiian spinner dolphin resting bays. DSG-Ocean passive acoustic recording devices were deployed in four bays along the Kona Coast of Hawai'i Island between January 8, 2011 and August 30, 2012. The devices sampled at 80 kHz, making 30-s recordings every four minutes. Overall, dolphins were acoustically detected on 37.1% to 89.6% of recording days depending on the bay. Vessel-based visual surveys overlapped with the PAM surveys on 202 days across the four bays. No significant differences were found between visual and acoustic detections suggesting acoustic surveys can be used as a proxy for visual surveys. Given the need to monitor dolphin presence across sites, PAM is the most suitable and efficient tool for monitoring long-term presence/absence. Concomitant photo-identification surveys are necessary to address changes in abundance over time.

A new species and new records of Molophilus Curtis, 1833 (Diptera: Limoniidae) from the Western Palaearctic Region.

PubMed

Kolcsár, Levente-Péter; Török, Edina; Keresztes, Lujza

2015-01-01

Molophilus Curtis, 1833 is the most species-rich Limoniidae genus with a total number of 1006 species and subspecies, from which 97 are recorded in the Western-Palaearctic region so far. However new species are still expected from less investigated regions, like the Balkans or the Eastern Europe. In the present article, we desrcibe a new limonid crane fly species, Molophilus balcanicus Kolcsár sp. n. from the Central Balkan area (Bulgaria). This new taxa is closely related to M. serpentiger Edwards, 1938 and M. variispinus Starý​, 1971 based on the external male genital structures, but differs from its siblings mostly in the structure of the inner and outer gonostylus. Additionally, a number of species are reported for the first time from various European countries, like M. variispinus Starý, 1971 and M. occultus de Meijere, 1918 from Romania; M. crassipygus de Meijere 1918, M. obsoletus Lackschewitz, 1940 and M. medius de Meijere, 1918 from Greece; M. flavus Goetghebuer, 1920 from Andorra; M. cinereifrons de Meijere, 1920 from Bulgaria and M. corniger Meijere, 1920 from Spain.

Culicoides Hypersensitivity in the Horse: 15 Cases in Southwestern British Columbia

PubMed Central

Kleider, N.; Lees, M. J.

1984-01-01

The investigation of a chronic, seasonal dermatitis of horses in southwestern British Columbia is described. Typically the history indicated an insidious onset, followed by a gradual progression in the severity of the signs each year. Lesions appeared during the warmer months of the year and tended to regress during the winter. The clinical signs consisted of areas of pruritus and excoriation, affecting predominantly the ventral midline, mane and tailhead. In all cases corticosteroid therapy relieved the pruritus and allowed the lesions to heal. The salient pathological findings were hyperkeratosis, spongiosis and a dermal infiltration of eosinophils together with mononuclear cells. These changes are typical of an allergic dermatitis, which has been recognized in many parts of the world as a hypersensitivity reaction to the bites of Culicoides spp. In this instance, the epidemiological findings relating to the geographic area, the local insect population and the distribution of lesions implicated Culicoides obsoletus as the etiological agent. ImagesFIGURE 1.FIGURE 2.Figure 3.FIGURE 4.Figure 5. PMID:17422351

Responses of Mammalian Insectivores, Amphibians, and Reptiles to Broad-Scale Manipulation of Coarse Woody Debris

DOE Office of Scientific and Technical Information (OSTI.GOV)

McCay, T.S.; Forschler, B.T.; Komoroski, M.J.

2002-03-10

Sampled shrews at 9.3 ha plots from logs manually removed and control plots in loblolly pine forests of the Southeastern Coastal Plain. Capture rates of Cryptotis parva were lower at plots from which deadwood was removed whereas capture rates of Blarina cavolinensis and Sorex longirostris did not differ between control and removal plots. Cryptotis may have been most sensitive to removal plots due to low population density, hence poor ability to move into areas of low reproduction. (Second Abstract, p. 37)Presentation of evidence that juvenile amphibians including Ambystomatid salamanders may disperse hundreds of meter from their natal wetlands within themore » weeks to months following metamorphosis. Data indicates Ambystoma trigrinum metamorphs can take at least six months to disperse and en route use non-polar lipid reserves garnished as larvae. Report suggests a land management regime that allows for both juvenile amphibian dispersal and also the consumptive use of the surrounding landscape.« less

Local extinction of a coral reef fish explained by inflexible prey choice

NASA Astrophysics Data System (ADS)

Brooker, R. M.; Munday, P. L.; Brandl, S. J.; Jones, G. P.

2014-12-01

While global extinctions of marine species are infrequent, local extinctions are becoming common. However, the role of habitat degradation and resource specialisation in explaining local extinction is unknown. On coral reefs, coral bleaching is an increasingly frequent cause of coral mortality that can result in dramatic changes to coral community composition. Coral-associated fishes are often specialised on a limited suite of coral species and are therefore sensitive to these changes. This study documents the local extinction of a corallivorous reef fish, Oxymonacanthus longirostris, following a mass bleaching event that altered the species composition of associated coral communities. Local extinction only occurred on reefs that also completely lost a key prey species, Acropora millepora, even though coral cover remained high. In an experimental test, fish continued to select bleached A. millepora over the healthy, but less-preferred prey species that resisted bleaching. These results suggest that behavioural inflexibility may limit the ability of specialists to cope with even subtle changes to resource availability.

Predation as the primary selective force in recurrent evolution of gigantism in Poecilozonites land snails in Quaternary Bermuda

PubMed Central

Olson, Storrs L.; Hearty, Paul J.

2010-01-01

During the last half million years, pulses of gigantism in the anagenetic lineage of land snails of the subgenus Poecilozonites on Bermuda were correlated with glacial periods when lower sea level resulted in an island nearly an order of magnitude larger than at present. During those periods, the island was colonized by large vertebrate predators that created selection pressure for large size and rapid growth in the snails. Extreme reduction in land area from rising seas, along with changes in ecological conditions at the onset of interglacial episodes, marked extinction events for large predators, after which snails reverted to much smaller size. The giant snails were identical in morphology during the last two glacials when the predators included a large flightless rail Rallus recessus (marine isotope stages (MIS) 4-2) and a crane Grus latipes and a duck Anas pachysceles (MIS 6). In a preceding glacial period (MIS 10), when the fauna also included the tortoise Hesperotestudo bermudae, the snails were not only large, but the shells were much thicker, presumably to prevent crushing by tortoises. Evolution of Poecilozonites provides an outstanding example of dramatic morphological change in response to environmental pressures in the absence of cladogenesis. PMID:20554560

Population status and habitat associations of the King Rail in the midwestern United States

USGS Publications Warehouse

Bolenbaugh, Jason R.; Cooper, Tom; Brady, Ryan S.; Willard, Karen L.; Krementz, David G.

2012-01-01

The migratory population of the King Rail (Rallus elegans) has declined dramatically during the past 50 years, emphasizing the need to document the distribution and status of this species to help guide conservation efforts. In an effort to guide King Rail breeding habitat protection and restoration, a landscape suitability index (LSI) model was developed for the Upper Mississippi River and Great Lakes Region Joint Venture (JV). To validate this model, 264 sites were surveyed across the JV region in 2008 and 2009 using the National Marshbird Monitoring protocol. Two other similarly collected data sets from Wisconsin (250 sites) and Ohio (259 sites) as well as data from the Cornell Laboratory of Ornithology's eBird database were added to our data set. Sampling effort was not uniform across the study area. King Rails were detected at 29 sites with the greatest concentration in southeastern Wisconsin and northeastern Illinois. Too few detections were made to validate the LSI model. King Rail detection sites tended to have microtopographic heterogeneity, more emergent herbaceous wetland vegetation and less woody vegetation. The migrant population of the King Rail is rare and warrants additional conservation efforts to achieve stated conservation population targets.

Predation as the primary selective force in recurrent evolution of gigantism in Poecilozonites land snails in Quaternary Bermuda.

PubMed

Olson, Storrs L; Hearty, Paul J

2010-12-23

During the last half million years, pulses of gigantism in the anagenetic lineage of land snails of the subgenus Poecilozonites on Bermuda were correlated with glacial periods when lower sea level resulted in an island nearly an order of magnitude larger than at present. During those periods, the island was colonized by large vertebrate predators that created selection pressure for large size and rapid growth in the snails. Extreme reduction in land area from rising seas, along with changes in ecological conditions at the onset of interglacial episodes, marked extinction events for large predators, after which snails reverted to much smaller size. The giant snails were identical in morphology during the last two glacials when the predators included a large flightless rail Rallus recessus (marine isotope stages (MIS) 4-2) and a crane Grus latipes and a duck Anas pachysceles (MIS 6). In a preceding glacial period (MIS 10), when the fauna also included the tortoise Hesperotestudo bermudae, the snails were not only large, but the shells were much thicker, presumably to prevent crushing by tortoises. Evolution of Poecilozonites provides an outstanding example of dramatic morphological change in response to environmental pressures in the absence of cladogenesis.

Male characteristics on female mud snails caused by antifouling bottom paints.

PubMed

Smith, B S

1981-02-01

This study continues an investigation of an anatomical abnormality, named 'imposex', which consists of a superimposition of male characteristics on to a functionally normal female reproductive anatomy of the dioecious snail Nassarius obsoletus Say. Imposex is prevalent in natural populations living near yacht basins and rarely found distant from them. In the current study caged snails were transferred between a yacht basin and a distant 'clean' locality where the natural population of snails was normal. Imposex was induced in some normal snails kept at the marina and suppressed, but not lost in abnormal snails kept at the clean locality. A similar positive result was obtained in the laboratory by exposing normal snails to organotin-containing antifouling paints and abnormal snails to clean sea water. Results were negative in parallel tests of various marina-associated materials which did not contain organotin. The laboratory studies have thus identified a causative factor for the anatomical abnormalities common near yacht basins in the natural environment. They also provide a rare, if not unique, example of a chemical agent which causes the appearance of superfluous anatomical features in an animal.

A new species and new records of Molophilus Curtis, 1833 (Diptera: Limoniidae) from the Western Palaearctic Region

PubMed Central

Török, Edina; Keresztes, Lujza

2015-01-01

Abstract Background Molophilus Curtis, 1833 is the most species-rich Limoniidae genus with a total number of 1006 species and subspecies, from which 97 are recorded in the Western-Palaearctic region so far. However new species are still expected from less investigated regions, like the Balkans or the Eastern Europe. New information In the present article, we desrcibe a new limonid crane fly species, Molophilus balcanicus Kolcsár sp. n. from the Central Balkan area (Bulgaria). This new taxa is closely related to M. serpentiger Edwards, 1938 and M. variispinus Starý​, 1971 based on the external male genital structures, but differs from its siblings mostly in the structure of the inner and outer gonostylus. Additionally, a number of species are reported for the first time from various European countries, like M. variispinus Starý, 1971 and M. occultus de Meijere, 1918 from Romania; M. crassipygus de Meijere 1918, M. obsoletus Lackschewitz, 1940 and M. medius de Meijere, 1918 from Greece; M. flavus Goetghebuer, 1920 from Andorra; M. cinereifrons de Meijere, 1920 from Bulgaria and M. corniger Meijere, 1920 from Spain. PMID:26379460

Occupancy modeling of autonomously recorded vocalizations to predict distribution of rallids in tidal wetlands

USGS Publications Warehouse

Stiffler, Lydia L.; Anderson, James T.; Katzner, Todd

2018-01-01

Conservation and management for a species requires reliable information on its status, distribution, and habitat use. We identified occupancy and distributions of king (Rallus elegans) and clapper (R. crepitans) rail populations in marsh complexes along the Pamunkey and Mattaponi Rivers in Virginia, USA by modeling data on vocalizations recorded from autonomous recording units (ARUs). Occupancy probability for both species combined was 0.64 (95% CI: 0.53, 0.75) in marshes along the Pamunkey and 0.59 (0.45, 0.72) in marshes along the Mattaponi. Occupancy probability along the Pamunkey was strongly influenced by salinity, increasing logistically by a factor of 1.62 (0.6, 2.65) per parts per thousand of salinity. In contrast, there was not a strong salinity gradient on the Mattaponi and therefore vegetative community structure determined occupancy probability on that river. Estimated detection probability across both marshes was 0.63 (0.62, 0.65), but detection rates decreased as the season progressed. Monitoring wildlife within wetlands presents unique challenges for conservation managers. Our findings provide insight not only into how rails responded to environmental variation but also into the general utility of ARUs for occupancy modeling of the distribution and habitat associations of rails within tidal marsh systems.

Combined larvicidal and adulticidal treatments to control Culicoides biting midges (Diptera: Ceratopogonidae): Results of a pilot study.

PubMed

Meloni, Giorgio; Cossu, Michela; Foxi, Cipriano; Vento, Luigi; Circosta, Salvatore; Burrai, Ernesta; Masala, Sergio; Goffredo, Maria; Satta, Giuseppe

2018-06-15

Culicoides biting midges can transmit viruses such as bluetongue virus and Schmallenberg virus to ruminants and African horse sickness virus to equines. The control of Culicoides population can be based on physical and/or chemical methods. This study aims to evaluate the efficacy of larvicides and adulticides combined treatments to control the vector Culicoides populations. Field trials have been conducted during 2014 on seven farms in northern Sardinia (Italy). Three insecticide treatments (larvicides and adulticides) have been carried out on three farms, whereas four farms remained unsprayed as untreated controls. For the larval control two commercial formulations, based on diflubenzuron and Bacillus thuringiensis var. israelensis (H-14), have been used. Against adults a deltamethrin based product has been sprayed on the walls and roofs of animal shelters. Adult Culicoides have been collected on each farm twice a week with an Onderstepoort blacklight suction trap. After each treatment a significant reduction in the abundance of total Culicoides, C. imicola and C. newsteadi s.l., has been observed. The Obsoletus complex density has been affected by the first two treatments. Our results suggest the possibility to control the Culicoides populations with a combination of adulticide and larvicide treatments. Copyright © 2018 Elsevier B.V. All rights reserved.

Avian habitat relationships in pinyon-juniper woodland

USGS Publications Warehouse

Sedgwick, James A.

1987-01-01

Habitat relationships of breeding birds were examined in northwestern Colorado in pinyon-juniper (Pinus edulis-Juniperus osteosperma) woodland and in openings where most overstory trees had been knocked down by anchor chaining. Vegetation characteristics and physical habitat features were measured in 233 0.04-ha circular plots around singing males of 13 species of birds from 15 May to 15 July 1980. Thirteen-group discriminant function analysis ordinated bird species along three habitat dimensions described by (1) canopy height; (2) slope, shrub size, and shrub species diversity; and (3) percentage canopy cover, large tree density, distance from a habitat edge, litter cover, and green cover. Woodland, open-area, and intermediate edge species were clearly segregated along the first discriminant axis, and species' associations with shrubs, inclination, ground cover, and edges were revealed by the ordinations along the second and third discriminant axes. Two-group discriminant analyses comparing occupied and available plots identified additional and more specific habitat associations. For example, Hermit Thrushes (Catharus guttatus) were associated with mature forested habitats and forest interiors, Virginia's Warblers (Vermivora virginiae) favored steep, oak-covered draws, Rock Wrens (Salpinctes obsoletus) selected areas where percentage log cover and small tree density were high, and Dusky Flycatchers (Empidonax oberholseri) preferred shrubby slopes with scattered large trees near woodland edges.

Expert knowledge as a foundation for the management of secretive species and their habitat

USGS Publications Warehouse

Drew, C. Ashton; Collazo, Jaime

2012-01-01

In this chapter, we share lessons learned during the elicitation and application of expert knowledge in the form of a belief network model for the habitat of a waterbird, the King Rail (Rallus elegans). A belief network is a statistical framework used to graphically represent and evaluate hypothesized cause and effect relationships among variables. Our model was a pilot project to explore the value of such a model as a tool to help the US Fish and Wildlife Service (USFWS) conserve species that lack sufficient empirical data to guide management decisions. Many factors limit the availability of empirical data that can support landscape-scale conservation planning. Globally, most species simply have not yet been subject to empirical study (Wilson 2000). Even for well-studied species, data are often restricted to specific geographic extents, to particular seasons, or to specific segments of a species’ life history. The USFWS mandates that the agency’s conservation actions (1) be coordinated across regional landscapes, (2) be founded on the best available science (with testable assumptions), and (3) support adaptive management through monitoring and assessment of action outcomes. Given limits on the available data, the concept of “best available science” in the context of conservation planning generally includes a mix of empirical data and expert knowledge (Sullivan et al. 2006).

Motion-based signaling in sympatric species of Australian agamid lizards.

PubMed

Ramos, Jose A; Peters, Richard A

2017-08-01

Signaling species occurring in sympatry are often exposed to similar environmental constraints, so similar adaptations to enhance signal efficacy are expected. However, potentially opposing selective pressures might be present to ensure species recognition. Here, we analyzed the movement-based signals of two pairs of sympatric lizard species to consider how reliable communication is maintained while avoiding misidentification. Our novel approach allows us to quantify signal contrast with plant motion noise at any site we measure, including those utilized by other species. Ctenophorus caudicinctus and Gowidon longirostris differed in display complexity and motor pattern use. They also differed in overall morphology, but their signal contrast scores are strikingly similar. These results demonstrate similar adaptations to their shared environment while maintaining species recognition cues. In contrast, Ctenophorus fordi and Ctenophorus pictus are much closer in appearance, but C. pictus produces considerably higher signal contrast scores, which we suggest is attributable to the absence of territoriality in C. fordi. Taken together, our data provide evidence for adaptation to the local environment in movement-based signals, while also meeting species recognition requirements, but the selective pressure to deal with local conditions is mediated by signal function.

Effects of alewife predation on zooplankton populations in Lake Michigan

USGS Publications Warehouse

Wells, LaRue

1970-01-01

The zooplankton populations in southeastern Lake Michigan underwent striking, size-related changes between 1954 and 1966. Forms that decline sharply were the largest cladocerans (Leptodora kindtii, Daphnia galeata, and D. retrocurva), the largest calanoid copepods (Limnocalanus macrurus, Epischura lacustris, and Diaptomus sicilis), and the largest cyclopoid copepod (Mesocyclops edax). Two of these, D. galeata and M. edax (both abundant in 1954), became extremely rare. Certain medium-sized or small species increased in numbers: Daphnia longiremis, Holopedium gibberum, Polyphemus pediculus, Bosmina longirostris, Bosmina coregoni, Ceriodaphnia sp., Cyclops bicuspidatus, Cyclops vernalis, and Diaptomus ashlandi. Evidence is strong that the changes were due to selective predation by alewives. The alewife was uncommon in southeastern Lake Michigan in 1954 but had increased to enormous proportions by 1966; there was a massive dieoff in spring 1967, and abundance remained relatively low in 1968. The composition of zooplankton populations in 1968 generally had shifted back toward that of 1954, although D. galeata and M. edax remained rare. The average size, and size at onset of maturity, of D. retrocurva decreased noticeably between 1954 and 1966 but increased between 1966 and 1968.

The effect of recording and analysis bandwidth on acoustic identification of delphinid species.

PubMed

Oswald, Julie N; Rankin, Shannon; Barlow, Jay

2004-11-01

Because many cetacean species produce characteristic calls that propagate well under water, acoustic techniques can be used to detect and identify them. The ability to identify cetaceans to species using acoustic methods varies and may be affected by recording and analysis bandwidth. To examine the effect of bandwidth on species identification, whistles were recorded from four delphinid species (Delphinus delphis, Stenella attenuata, S. coeruleoalba, and S. longirostris) in the eastern tropical Pacific ocean. Four spectrograms, each with a different upper frequency limit (20, 24, 30, and 40 kHz), were created for each whistle (n = 484). Eight variables (beginning, ending, minimum, and maximum frequency; duration; number of inflection points; number of steps; and presence/absence of harmonics) were measured from the fundamental frequency of each whistle. The whistle repertoires of all four species contained fundamental frequencies extending above 20 kHz. Overall correct classification using discriminant function analysis ranged from 30% for the 20-kHz upper frequency limit data to 37% for the 40-kHz upper frequency limit data. For the four species included in this study, an upper bandwidth limit of at least 24 kHz is required for an accurate representation of fundamental whistle contours.

Exceptionally well preserved late Quaternary plant and vertebrate fossils from a blue hole on Abaco, The Bahamas.

PubMed

Steadman, David W; Franz, Richard; Morgan, Gary S; Albury, Nancy A; Kakuk, Brian; Broad, Kenneth; Franz, Shelley E; Tinker, Keith; Pateman, Michael P; Lott, Terry A; Jarzen, David M; Dilcher, David L

2007-12-11

We report Quaternary vertebrate and plant fossils from Sawmill Sink, a "blue hole" (a water-filled sinkhole) on Great Abaco Island, The Bahamas. The fossils are well preserved because of deposition in anoxic salt water. Vertebrate fossils from peat on the talus cone are radiocarbon-dated from approximately 4,200 to 1,000 cal BP (Late Holocene). The peat produced skeletons of two extinct species (tortoise Chelonoidis undescribed sp. and Caracara Caracara creightoni) and two extant species no longer in The Bahamas (Cuban crocodile, Crocodylus rhombifer; and Cooper's or Gundlach's Hawk, Accipiter cooperii or Accipiter gundlachii). A different, inorganic bone deposit on a limestone ledge in Sawmill Sink is a Late Pleistocene owl roost that features lizards (one species), snakes (three species), birds (25 species), and bats (four species). The owl roost fauna includes Rallus undescribed sp. (extinct; the first Bahamian flightless rail) and four other locally extinct species of birds (Cooper's/Gundlach's Hawk, A. cooperii/gundlachii; flicker Colaptes sp.; Cave Swallow, Petrochelidon fulva; and Eastern Meadowlark, Sturnella magna) and mammals (Bahamian hutia, Geocapromys ingrahami; and a bat, Myotis sp.). The exquisitely preserved fossils from Sawmill Sink suggest a grassy pineland as the dominant plant community on Abaco in the Late Pleistocene, with a heavier component of coppice (tropical dry evergreen forest) in the Late Holocene. Important in its own right, this information also will help biologists and government planners to develop conservation programs in The Bahamas that consider long-term ecological and cultural processes.

Resumption of traditional drive hunting of dolphins in the Solomon Islands in 2013.

PubMed

Oremus, Marc; Leqata, John; Baker, C Scott

2015-05-01

The 'drive hunting' of dolphins has a long history in the Solomon Islands, specifically at the island of Malaita. In 2010, the most active village, Fanalei, suspended hunting in exchange for financial compensation from an international non-governmental organization but resumed hunting again in early 2013. Here, we report on a visit to Fanalei in March 2013 to document the species and number of dolphins killed in the renewed hunting. Detailed records for the 2013 hunting, up to the time of our visit, included at least 1500 pantropical spotted dolphins (Stenella attenuata), 159 spinner dolphins (Stenella longirostris) and 15 'bottlenose' dolphins, probably Tursiops truncatus. Molecular identification confirmed two of the species, pantropical spotted and spinner dolphins. A summary of all available records from 1976 to 2013 documented a minimum total of 15 454 dolphins killed by the Fanalei villagers alone. We also found the local price of a dolphin tooth had increased from about US$0.14 (SBD$1) in 2004 to about US$0.70 (SBD$5) in 2013. The large number of dolphins killed and the apparent incentive for future hunting offered by the increasing commercial value of teeth, highlight an urgent need to monitor hunts and assess the abundance and trends in local populations.

The antiquity of riverine adaptations in Iniidae (Cetacea, Odontoceti) documented by a humerus from the late Miocene of the Ituzaingó Formation, Argentina.

PubMed

Gutstein, Carolina Simon; Cozzuol, Mario Alberto; Pyenson, Nicholas D

2014-06-01

"River dolphins" are a paraphyletic group of toothed whales (Odontoceti) that represent independent secondary invasions of freshwater habitats. Different "river dolphin" lineages display suites of convergent morphological specializations that commonly reflect adaptations to riverine and freshwater environments, such as longirostry, reduced orbits, and wide, paddle-like flippers. One lineage, the Iniidae, is presently endemic to South America, and includes several extinct Neogene taxa along with their sole extant genus, Inia (the Amazon River dolphin). We report here a humerus recovered from the late Miocene deposits of the Ituzaingó Formation in the Paraná Basin of Argentina. The specimen exhibits diagnostic features of the family Iniidae, including a scapular-sternal joint of the humerus, which is a unique anatomical connection among mammals. This joint permits enhanced parasagittal adduction of the flipper as a control surface, relative to other odontocetes, providing Inia with a high degree of maneuverability in its structurally complex and heterogenous riverine habitat. This unique anatomical connection, here documented from the late Miocene (∼9 million years-6.5 million years old), not only provides the oldest diagnostic record for Iniidae, but it also indicates a similar habitat use for this lineage, a finding coincident with the current paleoenvironmental interpretation for the Ituzaingó Formation. Copyright © 2014 Wiley Periodicals, Inc.

A phylogenetic analysis of the Gruiformes (Aves) based on morphological characters, with an emphasis on the rails (Rallidae)

PubMed Central

C.Livezey, B.

1998-01-01

analytical impacts of homoplasy related to flightlessness in a number of rallid lineages. A strict consensus tree of 20,000 shortest trees compiled (length = 1232, CI = 0.463) confirmed the interfamilial relationships resolved in the ordinal analysis and established a number of other, variably supported groups within the Rallidae. Groupings within the Rallidae included: monophyly of Rallidae exclusive of Himantornis and a clade comprising Porphyrio (including Notornis) and Porphyrula; a poorly resolved, basal group of genera including Gymnocrex, Habroptila, Eulabeornis, Aramides, Canirallus and Mentocrex; an intermediate grade comprising Anurolimnas, Amaurolimnas, and Rougetius; monophyly of two major subdivisions of remaining rallids, one comprising Rallina (paraphyletic), Rallicula, and Sarothrura, and the other comprising the apparently paraphyletic 'long-billed' rails (e.g. Pardirallus, Cyanolimnas, Rallus, Gallirallus and Cabalus and a variably resolved clade comprising 'crakes' (e.g. Atlantisia, Laterallus and Porzana, waterhens (Amaurornis), moorhens (Gallinula and allied genera) and coots (Fulica). Relationships among 'crakes' remain poorly resolved; Laterallus may be paraphyletic, and Porzana is evidently polyphyletic and poses substantial challenges for reconciliation with current taxonomy. Relationships among the species of waterhens, moorhens and coots, however, were comparatively well resolved, and exhaustive, fine-scale analyses of several genera (Grus, Porphyrio, Aramides, Rallus, Laterallus and Fulica) and species complexes (Porphyrio porphyrio -group,Gallirallus philippensis -group and Fulica americana -group) revealed additional topological likelihoods. Many nodes shared by a majority of the shortest trees under equal weighting were common to all shortest trees found following one or two iterations of successive weighting of characters. Provisional placements of selected subfossil rallids (e.g. Diaphorapteryx, Aphanapteryx and Capellirallus ) were based on

Habitat use of nesting and brood-rearing King Rails in the Illinois and Upper Mississippi River Valleys

USGS Publications Warehouse

Darrah, A.J.; Krementz, D.G.

2011-01-01

Most studies of King Rail (Rallus elegans) have investigated habitat use during the nesting season, while few comparisons have been made between the nesting and brood-rearing seasons. King Rails were located during the nesting season in Missouri using repeated surveys with call playback, and systematic searches for broods were conducted during the brood-rearing season. King Rail adults were located at twelve points in 2006 and 14 points in 2007, and five King Rail broods were located in each year. Water depth was measured and dominant cover type determined for randomly sampled 5-m plots within used and unused habitats. Logistic regression models were fitted to the data and top models were selected from the candidate set using AICc. Nesting adults occurred more often in areas dominated by short (≤1 m) emergent vegetation ( = 0.77 ± 0.27) and deeper water ( = 0.05 ± 0.02). Broods occurred more often in areas dominated by short emergent vegetation ( = 1.19 ± 0.37) and shallow water ( = -0.17 ± 0.06), and avoided areas dominated by tall (>1 m) emergent vegetation ( =-1.15 ± 0.45). A modified catch-curve analysis was used to estimate chick daily survival rates during selected 7-day periods for each year. Daily survival rate ranged from 0.92 ± 0.008 in late June 2007 to 0.96 ± 0.005 in late July 2006. Management plans for King Rails should include the different habitat types needed during the nesting and brood-rearing stages.

Linking multi-temporal satellite imagery to coastal wetland dynamics and bird distribution

USGS Publications Warehouse

Pickens, Bradley A.; King, Sammy L.

2014-01-01

Ecosystems are characterized by dynamic ecological processes, such as flooding and fires, but spatial models are often limited to a single measurement in time. The characterization of direct, fine-scale processes affecting animals is potentially valuable for management applications, but these are difficult to quantify over broad extents. Direct predictors are also expected to improve transferability of models beyond the area of study. Here, we investigated the ability of non-static and multi-temporal habitat characteristics to predict marsh bird distributions, while testing model generality and transferability between two coastal habitats. Distribution models were developed for king rail (Rallus elegans), common gallinule (Gallinula galeata), least bittern (Ixobrychus exilis), and purple gallinule (Porphyrio martinica) in fresh and intermediate marsh types in the northern Gulf Coast of Louisiana and Texas, USA. For model development, repeated point count surveys of marsh birds were conducted from 2009 to 2011. Landsat satellite imagery was used to quantify both annual conditions and cumulative, multi-temporal habitat characteristics. We used multivariate adaptive regression splines to quantify bird-habitat relationships for fresh, intermediate, and combined marsh habitats. Multi-temporal habitat characteristics ranked as more important than single-date characteristics, as temporary water was most influential in six of eight models. Predictive power was greater for marsh type-specific models compared to general models and model transferability was poor. Birds in fresh marsh selected for annual habitat characterizations, while birds in intermediate marsh selected for cumulative wetness and heterogeneity. Our findings emphasize that dynamic ecological processes can affect species distribution and species-habitat relationships may differ with dominant landscape characteristics.

Breeding ecology and nesting habitat associations of five marsh bird species in western New York

USGS Publications Warehouse

Lor, S.; Malecki, R.A.

2006-01-01

Nesting habitats and nest success of five species of marsh birds were studied during 1997 and 1998 at the Iroquois National Wildlife Refuge (NWR) and the adjacent Oak Orchard and Tonawanda State Wildlife Management Areas (WMA) located in western New York. Nest searches located 18 American Bittern (Botaurus lentiginosus), 117 Least Bittern (Ixobrychus exilis), 189 Pied-billed Grebe (Podilymbus podiceps), 23 Sora (Porzana carolina), and 72 Virginia Rail (Rallus limicola) nests. Average nest densities in 1998, our best nest searching year, ranged from 0.01/ha for Soras (N = 8) to 0.28/ha for Pied-billed Grebes (N = 160). Mayfield nest success estimates for Least Bittern were 80% (N = 16) in 1997 and 46% (N = 37) in 1998. Nest success estimates were 72% (N = 55) for Pied-billed Grebe, 43% (N = 6) for Sora, and 38% (N = 20) for Virginia Rail. Nests of all five species were located in ???70% emergent vegetation with a mean water depth of 24-56 cm and an average vegetation height that ranged from 69-133 cm. Logistic regression models were developed for each species using habitat variables at nest and random site locations. Each model was ranked with Akaike's Information Criterion for small sample size (AICc). In general, our best models indicated that increased emergent vegetation and horizontal cover with shallow water depths improved the odds of encountering marsh bird nests in the wetlands of western New York. We suggest that managing wetlands as a complex, at different stages of succession, would best benefit marsh bird species.

Multiscale habitat selection of wetland birds in the northern Gulf Coast

USGS Publications Warehouse

Pickens, Bradley A.; King, Sammy L.

2014-01-01

The spatial scale of habitat selection has become a prominent concept in ecology, but has received less attention in coastal ecology. In coastal marshes, broad-scale marsh types are defined by vegetation composition over thousands of hectares, water-level management is applied over hundreds of hectares, and fine-scale habitat is depicted by tens of meters. Individually, these scales are known to affect wetland fauna, but studies have not examined all three spatial scales simultaneously. We investigated wetland bird habitat selection at the three scales and compared single- and multiscale models. From 2009 to 2011, we surveyed marsh birds (i.e., Rallidae, bitterns, grebes), shorebirds, and wading birds in fresh and intermediate (oligohaline) coastal marsh in Louisiana and Texas, USA. Within each year, six repeated surveys of wintering, resident, and migratory breeding birds were conducted at > 100 points (n = 304). The results revealed fine-scale factors, primarily water depth, were consistently better predictors than marsh type or management. However, 10 of 11 species had improved models with the three scales combined. Birds with a linear association with water depth were, correspondingly, most abundant with deeper fresh marsh and permanently impounded water. Conversely, intermediate marsh had a greater abundance of shallow water species, such as king rail Rallus elegans, least bittern Ixobrychus exilis, and sora Porzana carolina. These birds had quadratic relationships with water depth or no relationship. Overall, coastal birds were influenced by multiple scales corresponding with hydrological characteristics. The effects suggest the timing of drawdowns and interannual variability in spring water levels can greatly affect wetland bird abundance.

Determination of production biology of cladocera in a reservoir receiving hyperthermal effluents from a nuclear production reactor. [Par Pond

DOE Office of Scientific and Technical Information (OSTI.GOV)

Vigerstad, T J

1980-01-01

The effects on zooplankton of residence in a cooling reservoir receiving hyperthermal effluents directly from a nuclear-production-reactor were studied. Rates of cladoceran population production were compared at two stations in the winter and summer of 1976 on Par Pond located on the Savannah River Plant, Aiken, SC. One station was located in an area of the reservoir directly receiving hyperthermal effluent (Station MAS) and the second was located about 4 km away in an area where surface temperatures were normal for reservoirs in the general geographical region (Station CAS). A non-parametric comparison between stations of standing stock and fecundity datamore » for Bosmina longirostris, taken for the egg ratio model, was used to observe potential hyperthermal effluent effects. There was a statistically higher incidence of deformed eggs in the Bosmina population at Station MAS in the summer. Bosmina standing stock underwent two large oscillations in the winter and three large oscillations in the summer at Station MAS compared with two in the winter and one in the summer at Station CAS. These results are consistent with almost all other Par Pond studies which have found the two stations to be essentially similar in spectra composition but with some statistically significant differences in various aspects of the biology of the species.« less

Flies and flowers in Darwin's race.

PubMed

Pauw, Anton; Stofberg, Jaco; Waterman, Richard J

2009-01-01

The idea of coevolution originated with Darwin's proposal that long-proboscid pollinators and long-tubed flowers might be engaged in reciprocal selection, but this has not been demonstrated. Here we test key aspects of Darwin's hypothesis of reciprocal selection in an experiment with naturally interacting populations of extremely long-proboscid flies (Moegistorhynchus longirostris: Nemestinidae) and long-tubed irises (Lapeirousia anceps: Iridaceae). We show that the benefit derived by both the fly (volume of nectar consumed) and the plant (number pollen grains received) depends on the relative length of their interacting organs. Each trait is shown to act both as agent and target in directional reciprocal selection, potentially leading to a race. This understanding of how fitness in both species varies in relation to the balance of their armament allows us to make tentative predictions about the nature of selection across multiple communities. We find that in each community a core group of long-tubed plant species might together be involved in diffuse coevolution with the fly. In poorly matched populations, the imbalance in armament is too great to allow reciprocal selection to act, and these species might instead experience one-sided selection that leads to convergence with the core species. Reciprocal selection drives the evolution of the community, then, additional species become attached to the network of interacting mutualists by convergence.

Bayesian spatiotemporal analysis of zero-inflated biological population density data by a delta-normal spatiotemporal additive model.

PubMed

Arcuti, Simona; Pollice, Alessio; Ribecco, Nunziata; D'Onghia, Gianfranco

2016-03-01

We evaluate the spatiotemporal changes in the density of a particular species of crustacean known as deep-water rose shrimp, Parapenaeus longirostris, based on biological sample data collected during trawl surveys carried out from 1995 to 2006 as part of the international project MEDITS (MEDiterranean International Trawl Surveys). As is the case for many biological variables, density data are continuous and characterized by unusually large amounts of zeros, accompanied by a skewed distribution of the remaining values. Here we analyze the normalized density data by a Bayesian delta-normal semiparametric additive model including the effects of covariates, using penalized regression with low-rank thin-plate splines for nonlinear spatial and temporal effects. Modeling the zero and nonzero values by two joint processes, as we propose in this work, allows to obtain great flexibility and easily handling of complex likelihood functions, avoiding inaccurate statistical inferences due to misclassification of the high proportion of exact zeros in the model. Bayesian model estimation is obtained by Markov chain Monte Carlo simulations, suitably specifying the complex likelihood function of the zero-inflated density data. The study highlights relevant nonlinear spatial and temporal effects and the influence of the annual Mediterranean oscillations index and of the sea surface temperature on the distribution of the deep-water rose shrimp density. © 2015 WILEY-VCH Verlag GmbH & Co. KGaA, Weinheim.

Ability of natural astaxanthin from shrimp by-products to attenuate liver oxidative stress in diabetic rats.

PubMed

Sila, Assaâd; Kamoun, Zeineb; Ghlissi, Zohra; Makni, Mohamed; Nasri, Moncef; Sahnoun, Zouhaier; Nedjar-Arroume, Naima; Bougatef, Ali

2015-04-01

Reactive oxygen species play a crucial role in the pathogenesis of diabetes and its complications. The present study was undertaken, in vivo, to examine the protective effect of astaxanthin extracted from the shell waste of deep-water pink shrimp (Parapenaeus longirostris) against oxidative stress of alloxanic adult male rats. Alloxan treatment revealed a significant elevation in plasma glycemia and lipid parameters such as total lipid, total cholesterol and triglycerides compared to the control group (C). In addition, liver malonaldialdehyde levels (MDA), an index of lipid peroxidation, significantly increased compared to control group. The activities of antioxidant enzymes such as superoxide dismutase (SOD), catalase (CAT), glutathione peroxidase (GPx) and glutathione reductase (GR) and reduced glutathione (GSH) levels decreased significantly compared to control group. Moreover, diabetic rats presented a significant increase in the activities of aspartate transaminase (AST) alanine transaminase (ALT) and alkaline phosphatase (ALP) in plasma, indicating considerable hepatocellular injury. Astaxanthin treatment restores these parameters near to control values. Histological studies on the liver tissue of alloxan and astaxanthin treated rats confirmed the protective effects of astaxanthin. The results revealed that astaxanthin may be helpful in preventing diabetic complications in adult rats by reversing hepatotoxicity. It can be one of the ingredients in a number of healthy products. Copyright © 2014 Institute of Pharmacology, Polish Academy of Sciences. Published by Elsevier Urban & Partner Sp. z o.o. All rights reserved.

Food of blueback herring and threadfin shad in Jocassee Reservoir, South Carolina

USGS Publications Warehouse

Davis, Bruce M.; Foltz, Jeffrey W.

1991-01-01

Threadfin shad Dorosoma petenense and blueback herring Alosa aestivalis were introduced into Jocassee Reservoir, South Carolina, in the early 1970s as prey for large piscivores. To assess the potential for trophic competition between these clupeids, we examined their diets and the extent of diet overlap in May, August, and December 1982 and February 1983. The diet of blueback herring consisted mainly of large species of cladocerans and copepods supplemented in August with Chaoborus punctipennis and young fish. Mean length of the organisms eaten by blueback herring was 1.4 mm. Threadfin shad fed on smaller species of cladocerans and copepods, as well as on rotifers and copepod nauplii. The mean length of the organisms eaten by threadfin shad was 0.4 mm, which differed significantly from the mean length of the zooplankton population in Jocassee Reservoir (0.6 mm). Phytoplankton contributed 24 and 32% of the stomach contents of threadfin shad in August and December. Bosmina longirostris was important in the diet of both species, although blueback herring showed negative selection for it. Diet overlap between the two clupeids was low on all four dates. Although we found no evidence of trophic competition between the two species in Jocassee Reservoir, we do not recommend stocking them together, because both species are voracious planktivores and blueback herring are piscivorous.

Characteristics and fate of the spermatozoa of Inachus phalangium (Decapoda, Majidae): description of novel sperm structures and evidence for an additional mechanism of sperm competition in Brachyura.

PubMed

Rorandelli, Rocco; Paoli, Francesco; Cannicci, Stefano; Mercati, David; Giusti, Fabiola

2008-03-01

Various aspects of the reproductive anatomy of the spider crab Inachus phalangium are investigated utilizing light and electron microscopy. Spermatozoal ultrastructure reveals the presence of a glycocalyx in the peripheral region of the periopercular rim, never recorded before in crustacean sperm cells. Sperm cell morphological traits such as semi-lunar acrosome shape, centrally perforate and flat operculum, and absence of a thickened ring, are shared only with Macropodia longirostris, confirming a close phylogenetic relationship of these species and their separation from the other members of the family Majidae. Spermatozoa are transferred to females inside spermatophores of different sizes, but during ejaculate transfer, larger spermatophores might be ruptured by tooth-like structures present on the ejaculatory canal of the male first gonopod, releasing free sperm cells. Such a mechanism could represent the first evidence of a second form of sperm competition in conflict with sperm displacement, the only mechanism of sperm competition known among Brachyura, enabling paternity for both dominant and smaller, non-dominant, males. In addition, we propose several hypotheses concerning the remote and proximal causes of the existence of large seminal receptacles in females of I. phalangium. Among these, genetically diverse progeny, reduction of sexual harassment and phylogenetic retention seem the most plausible, while acquisition of nutrients from seminal fluids, demonstrated in other arthropods, and suggested by previous studies, could be discarded on the basis of the presented data.

Annotated catalogue of the Tachinidae (Insecta, Diptera) of the Afrotropical Region, with the description of seven new genera

PubMed Central

O’Hara, James E.; Cerretti, Pierfilippo

2016-01-01

Abstract The Tachinidae of the Afrotropical Region are catalogued and seven genera and eight species are newly described. There are 237 genera and 1126 species recognized, of which 101 genera and 1043 species are endemic to the region. The catalogue is based on examination of the primary literature comprising about 525 references as well as numerous name-bearing types and other specimens housed in collections. Taxa are arranged hierarchically and alphabetically under the categories of subfamily, tribe, genus, subgenus (where recognized), species, and rarely subspecies. Nomenclatural information is provided for all genus-group and species-group names, including lists of synonyms (mostly restricted to Afrotropical taxa) and name-bearing type data. Species distributions are recorded by country within the Afrotropical Region and by larger geographical divisions outside the region. Additional information is given in the form of notes, numbering about 300 in the catalogue section. Seven genera and eight species are described as new: Afrophylax Cerretti & O’Hara with type species Sturmia aureiventris Villeneuve, 1910, gen. n. (Exoristinae, Eryciini); Austrosolieria Cerretti & O’Hara with type species Austrosolieria londti Cerretti & O’Hara, gen. n. and sp. n. (South Africa) and Austrosolieria freidbergi Cerretti & O’Hara, sp. n. (Malawi) (Tachininae, Leskiini); Carceliathrix Cerretti & O’Hara with type species Phorocera crassipalpis Villeneuve, 1938, gen. n. (Exoristinae, Eryciini); Filistea Cerretti & O’Hara with type species Viviania aureofasciata Curran, 1927, gen. n. and Filistea verbekei Cerretti & O’Hara, sp. n. (Cameroon, D.R. Congo, Uganda) (Exoristinae, Blondeliini); Mesnilotrix Cerretti & O’Hara with type species Dexiotrix empiformis Mesnil, 1976, gen. n. (Dexiinae, Dexiini); Myxophryxe Cerretti & O’Hara with type species Phorocera longirostris Villeneuve, 1938, gen. n., Myxophryxe murina Cerretti & O’Hara, sp. n. (South Africa), Myxophryxe

Identification of kin structure among Guam rail founders: a comparison of pedigrees and DNA profiles

USGS Publications Warehouse

Haig, Susan M.; Ballou, J.D.; Casna, N.J.

1994-01-01

Kin structure among founders can have a significant effect on subsequent population structure. Here we use the correlation between DNA profile similarity and relatedness calculated from pedigrees to test hypotheses regarding kin structure among founders to the captive Guam rail (Rallus owstoni) population. Five different pedigrees were generated under the following hypotheses: (i) founders are unrelated; (ii) founders are unrelated except for same-nest chicks; (iii) founders from the same major site are siblings; (iv) founders from the same local site are siblings; and (v) founders are related as defined by a UPGMA cluster analysis of DNA similarity data. Relatedness values from pedigrees 1, 2 and 5 had the highest correlation with DNA similarity but the correlation between relatedness and similarity were not significantly different among pedigrees. Pedigree 5 resulted in the highest correlation overall when using only relatedness values that changed as a result of different founder hypotheses. Thus, founders were assigned relatedness based on pedigree 5 because it had the highest correlations with DNA similarity, was the most conservative approach, and incorporated all field data. The analyses indicated that estimating relatedness using DNA profiles remains problematic, therefore we compared mean kinship, a measure of genetic importance, with mean DNA profile similarity to determine if genetic importance among individuals could be determined via use of DNA profiles alone. The significant correlation suggests this method may provide more information about population structure than was previously thought. Thus, DNA profiles can provide a reasonable explanation for founder relatedness and mean DNA profile similarity may be helpful in determining relative genetic importance of individuals when detailed pedigrees are absent.

Multi-scale habitat selection in highly territorial bird species: Exploring the contribution of nest, territory and landscape levels to site choice in breeding rallids (Aves: Rallidae)

NASA Astrophysics Data System (ADS)

Jedlikowski, Jan; Chibowski, Piotr; Karasek, Tomasz; Brambilla, Mattia

2016-05-01

Habitat selection often involves choices made at different spatial scales, but the underlying mechanisms are still poorly understood, and studies that investigate the relative importance of individual scales are rare. We investigated the effect of three spatial scales (landscape, territory, nest-site) on the occurrence pattern of little crake Zapornia parva and water rail Rallus aquaticus at 74 ponds in the Masurian Lakeland, Poland. Habitat structure, food abundance and water chemical parameters were measured at nests and random points within landscape plots (from 300-m to 50-m radius), territory (14-m) and nest-site plots (3-m). Regression analyses suggested that the most relevant scale was territory level, followed by landscape, and finally by nest-site for both species. Variation partitioning confirmed this pattern for water rail, but also highlighted the importance of nest-site (the level explaining the highest share of unique variation) for little crake. The most important variables determining the occurrence of both species were water body fragmentation (landscape), vegetation density (territory) and water depth (at territory level for little crake, and at nest-site level for water rail). Finally, for both species multi-scale models including factors from different levels were more parsimonious than single-scale ones, i.e. habitat selection was likely a multi-scale process. The importance of particular spatial scales seemed more related to life-history traits than to the extent of the scales considered. In the case of our study species, the territory level was highly important likely because both rallids have to obtain all the resources they need (nest site, food and mates) in relatively small areas, the multi-purpose territories they defend.

Geographical distribution of Culicoides (DIPTERA: CERATOPOGONIDAE) in mainland Portugal: Presence/absence modelling of vector and potential vector species.

PubMed

Ramilo, David W; Nunes, Telmo; Madeira, Sara; Boinas, Fernando; da Fonseca, Isabel Pereira

2017-01-01

Vector-borne diseases are not only accounted responsible for their burden on human health-care systems, but also known to cause economic constraints to livestock and animal production. Animals are affected directly by the transmitted pathogens and indirectly when animal movement is restricted. Distribution of such diseases depends on climatic and social factors, namely, environmental changes, globalization, trade and unplanned urbanization. Culicoides biting midges are responsible for the transmission of several pathogenic agents with relevant economic impact. Due to a fragmentary knowledge of their ecology, occurrence is difficult to predict consequently, limiting the control of these arthropod vectors. In order to understand the distribution of Culicoides species, in mainland Portugal, data collected during the National Entomologic Surveillance Program for Bluetongue disease (2005-2013), were used for statistical evaluation. Logistic regression analysis was preformed and prediction maps (per season) were obtained for vector and potentially vector species. The variables used at the present study were selected from WorldClim (two climatic variables) and CORINE databases (twenty-two land cover variables). This work points to an opposite distribution of C. imicola and species from the Obsoletus group within mainland Portugal. Such findings are evidenced in autumn, with the former appearing in Central and Southern regions. Although appearing northwards, on summer and autumn, C. newsteadi reveals a similar distribution to C. imicola. The species C. punctatus appears in all Portuguese territory throughout the year. Contrary, C. pulicaris is poorly caught in all areas of mainland Portugal, being paradoxical present near coastal areas and higher altitude regions.

Geographical distribution of Culicoides (DIPTERA: CERATOPOGONIDAE) in mainland Portugal: Presence/absence modelling of vector and potential vector species

PubMed Central

Madeira, Sara; Boinas, Fernando; da Fonseca, Isabel Pereira

2017-01-01

Vector-borne diseases are not only accounted responsible for their burden on human health-care systems, but also known to cause economic constraints to livestock and animal production. Animals are affected directly by the transmitted pathogens and indirectly when animal movement is restricted. Distribution of such diseases depends on climatic and social factors, namely, environmental changes, globalization, trade and unplanned urbanization. Culicoides biting midges are responsible for the transmission of several pathogenic agents with relevant economic impact. Due to a fragmentary knowledge of their ecology, occurrence is difficult to predict consequently, limiting the control of these arthropod vectors. In order to understand the distribution of Culicoides species, in mainland Portugal, data collected during the National Entomologic Surveillance Program for Bluetongue disease (2005–2013), were used for statistical evaluation. Logistic regression analysis was preformed and prediction maps (per season) were obtained for vector and potentially vector species. The variables used at the present study were selected from WorldClim (two climatic variables) and CORINE databases (twenty-two land cover variables). This work points to an opposite distribution of C. imicola and species from the Obsoletus group within mainland Portugal. Such findings are evidenced in autumn, with the former appearing in Central and Southern regions. Although appearing northwards, on summer and autumn, C. newsteadi reveals a similar distribution to C. imicola. The species C. punctatus appears in all Portuguese territory throughout the year. Contrary, C. pulicaris is poorly caught in all areas of mainland Portugal, being paradoxical present near coastal areas and higher altitude regions. PMID:28683145

Spatio-temporal optimization of sampling for bluetongue vectors (Culicoides) near grazing livestock

PubMed Central

2013-01-01

Background Estimating the abundance of Culicoides using light traps is influenced by a large variation in abundance in time and place. This study investigates the optimal trapping strategy to estimate the abundance or presence/absence of Culicoides on a field with grazing animals. We used 45 light traps to sample specimens from the Culicoides obsoletus species complex on a 14 hectare field during 16 nights in 2009. Findings The large number of traps and catch nights enabled us to simulate a series of samples consisting of different numbers of traps (1-15) on each night. We also varied the number of catch nights when simulating the sampling, and sampled with increasing minimum distances between traps. We used resampling to generate a distribution of different mean and median abundance in each sample. Finally, we used the hypergeometric distribution to estimate the probability of falsely detecting absence of vectors on the field. The variation in the estimated abundance decreased steeply when using up to six traps, and was less pronounced when using more traps, although no clear cutoff was found. Conclusions Despite spatial clustering in vector abundance, we found no effect of increasing the distance between traps. We found that 18 traps were generally required to reach 90% probability of a true positive catch when sampling just one night. But when sampling over two nights the same probability level was obtained with just three traps per night. The results are useful for the design of vector monitoring programmes on fields with grazing animals. PMID:23705770

The king of snakes: performance and morphology of intraguild predators (Lampropeltis) and their prey (Pantherophis).

PubMed

Penning, David A; Moon, Brad R

2017-03-15

Across ecosystems and trophic levels, predators are usually larger than their prey, and when trophic morphology converges, predators typically avoid predation on intraguild competitors unless the prey is notably smaller in size. However, a currently unexplained exception occurs in kingsnakes in the genus Lampropeltis Kingsnakes are able to capture, constrict and consume other snakes that are not only larger than themselves but that are also powerful constrictors (such as ratsnakes in the genus Pantherophis ). Their mechanisms of success as intraguild predators on other constrictors remain unknown. To begin addressing these mechanisms, we studied the scaling of muscle cross-sectional area, pulling force and constriction pressure across the ontogeny of six species of snakes ( Lampropeltis californiae , L. getula , L. holbrooki , Pantherophis alleghaniensis , P. guttatus and P. obsoletus ). Muscle cross-sectional area is an indicator of potential force production, pulling force is an indicator of escape performance, and constriction pressure is a measure of prey-handling performance. Muscle cross-sectional area scaled similarly for all snakes, and there was no significant difference in maximum pulling force among species. However, kingsnakes exerted significantly higher pressures on their prey than ratsnakes. The similar escape performance among species indicates that kingsnakes win in predatory encounters because of their superior constriction performance, not because ratsnakes have inferior escape performance. The superior constriction performance by kingsnakes results from their consistent and distinctive coil posture and perhaps from additional aspects of muscle structure and function that need to be tested in future research. © 2017. Published by The Company of Biologists Ltd.

Rhythmic contractility in the hepatic portal "corkscrew" vein of the rat snake.

PubMed

Conklin, Daniel J; Lillywhite, Harvey B; Bishop, Barbara; Hargens, Alan R; Olson, Kenneth R

2009-03-01

Terrestrial, but not aquatic, species of snakes have hepatic portal veins with a corkscrew morphology immediately posterior of the liver. Relatively large volumes of venous blood are associated with this region, and the corkscrew vein has been proposed to function as a bidirectional valve that impedes gravitational shifts of intravascular volume. To better understand the functional significance of the corkscrew anatomy, we investigated the histology and contractile mechanisms in isolated corkscrew segments of the hepatic portal vein of a yellow rat snake (Pantherophis obsoletus). Morphologically, the corkscrew portal vein is here shown to have two distinct layers of smooth muscle--an inner circular layer, and an outer longitudinal layer, separated by a layer of collagen--whereas only a single circular layer of smooth muscle is present in the adjacent posterior caval vein. Low frequency (approximately 0.3 cycles*min(-1)) spontaneous and catecholamine-induced rhythms were observed in 11% and 89% of portal vein segments, respectively, but neither spontaneous nor agonist-induced cycling was observed in adjacent posterior (non-corkscrew) caval veins. Catecholamines, angiotensin II, or stretch increased the amplitude and/or frequency of contractile cycles. Ouabain, verapamil or indomethacin, but not tetrodotoxin, alpha-, or ss-adrenergic receptor antagonists, inhibited cyclical contractions indicating a dependence of these cycles on Na+/K+ ATPase, extracellular Ca2+ and prostanoid(s). These data suggest that the rhythmic contractility of the corkscrew segment of the ophidian portal vein may act in conjunction with its morphological features to improve venous return and to prevent retrograde shifts of blood that might otherwise pool in posterior veins.

Understanding interaction effects of climate change and fire management on bird distributions through combined process and habitat models

USGS Publications Warehouse

White, Joseph D.; Gutzwiller, Kevin J.; Barrow, Wylie C.; Johnson-Randall, Lori; Zygo, Lisa; Swint, Pamela

2011-01-01

Avian conservation efforts must account for changes in vegetation composition and structure associated with climate change. We modeled vegetation change and the probability of occurrence of birds to project changes in winter bird distributions associated with climate change and fire management in the northern Chihuahuan Desert (southwestern U.S.A.). We simulated vegetation change in a process-based model (Landscape and Fire Simulator) in which anticipated climate change was associated with doubling of current atmospheric carbon dioxide over the next 50 years. We estimated the relative probability of bird occurrence on the basis of statistical models derived from field observations of birds and data on vegetation type, topography, and roads. We selected 3 focal species, Scaled Quail (Callipepla squamata), Loggerhead Shrike (Lanius ludovicianus), and Rock Wren (Salpinctes obsoletus), that had a range of probabilities of occurrence for our study area. Our simulations projected increases in relative probability of bird occurrence in shrubland and decreases in grassland and Yucca spp. and ocotillo (Fouquieria splendens) vegetation. Generally, the relative probability of occurrence of all 3 species was highest in shrubland because leaf-area index values were lower in shrubland. This high probability of occurrence likely is related to the species' use of open vegetation for foraging. Fire suppression had little effect on projected vegetation composition because as climate changed there was less fuel and burned area. Our results show that if future water limits on plant type are considered, models that incorporate spatial data may suggest how and where different species of birds may respond to vegetation changes.

Understanding interaction effects of climate change and fire management on bird distributions through combined process and habitat models

USGS Publications Warehouse

White, Joseph D.; Gutzwiller, Kevin J.; Barrow, Wylie C.; Johnson-Randall, Lori; Zygo, Lisa; Swint, Pamela

2011-01-01

Avian conservation efforts must account for changes in vegetation composition and structure associated with climate change. We modeled vegetation change and the probability of occurrence of birds to project changes in winter bird distributions associated with climate change and fire management in the northern Chihuahuan Desert (southwestern U.S.A.). We simulated vegetation change in a process-based model (Landscape and Fire Simulator) in which anticipated climate change was associated with doubling of current atmospheric carbon dioxide over the next 50 years. We estimated the relative probability of bird occurrence on the basis of statistical models derived from field observations of birds and data on vegetation type, topography, and roads. We selected 3 focal species, Scaled Quail (Callipepla squamata), Loggerhead Shrike (Lanius ludovicianus), and Rock Wren (Salpinctes obsoletus), that had a range of probabilities of occurrence for our study area. Our simulations projected increases in relative probability of bird occurrence in shrubland and decreases in grassland and Yucca spp. and ocotillo (Fouquieria splendens) vegetation. Generally, the relative probability of occurrence of all 3 species was highest in shrubland because leaf-area index values were lower in shrubland. This high probability of occurrence likely is related to the species' use of open vegetation for foraging. Fire suppression had little effect on projected vegetation composition because as climate changed there was less fuel and burned area. Our results show that if future water limits on plant type are considered, models that incorporate spatial data may suggest how and where different species of birds may respond to vegetation changes. ??2011 Society for Conservation Biology.

Temporally and spatially partitioned behaviours of spinner dolphins: implications for resilience to human disturbance

PubMed Central

Johnston, David W.; Christiansen, Fredrik

2017-01-01

Selective forces shape the evolution of wildlife behavioural strategies and influence the spatial and temporal partitioning of behavioural activities to maximize individual fitness. Globally, wildlife is increasingly exposed to human activities which may affect their behavioural activities. The ability of wildlife to compensate for the effects of human activities may have implications for their resilience to disturbance. Resilience theory suggests that behavioural systems which are constrained in their repertoires are less resilient to disturbance than flexible systems. Using behavioural time-series data, we show that spinner dolphins (Stenella longirostris) spatially and temporally partition their behavioural activities on a daily basis. Specifically, spinner dolphins were never observed foraging during daytime, where resting was the predominant activity. Travelling and socializing probabilities were higher in early mornings and late afternoons when dolphins were returning from or preparing for nocturnal feeding trips, respectively. The constrained nature of spinner dolphin behaviours suggests they are less resilient to human disturbance than other cetaceans. These dolphins experience the highest exposure rates to human activities ever reported for any cetaceans. Over the last 30 years human activities have increased significantly in Hawaii, but the spinner dolphins still inhabit these bays. Recent abundance estimates (2011 and 2012) however, are lower than all previous estimates (1979–1981, 1989–1992 and 2003), indicating a possible long-term impact. Quantification of the spatial and temporal partitioning of wildlife behavioural schedules provides critical insight for conservation measures that aim to mitigate the effects of human disturbance. PMID:28280561

Temporally and spatially partitioned behaviours of spinner dolphins: implications for resilience to human disturbance.

PubMed

Tyne, Julian A; Johnston, David W; Christiansen, Fredrik; Bejder, Lars

2017-01-01

Selective forces shape the evolution of wildlife behavioural strategies and influence the spatial and temporal partitioning of behavioural activities to maximize individual fitness. Globally, wildlife is increasingly exposed to human activities which may affect their behavioural activities. The ability of wildlife to compensate for the effects of human activities may have implications for their resilience to disturbance. Resilience theory suggests that behavioural systems which are constrained in their repertoires are less resilient to disturbance than flexible systems. Using behavioural time-series data, we show that spinner dolphins ( Stenella longirostris ) spatially and temporally partition their behavioural activities on a daily basis. Specifically, spinner dolphins were never observed foraging during daytime, where resting was the predominant activity. Travelling and socializing probabilities were higher in early mornings and late afternoons when dolphins were returning from or preparing for nocturnal feeding trips, respectively. The constrained nature of spinner dolphin behaviours suggests they are less resilient to human disturbance than other cetaceans. These dolphins experience the highest exposure rates to human activities ever reported for any cetaceans. Over the last 30 years human activities have increased significantly in Hawaii, but the spinner dolphins still inhabit these bays. Recent abundance estimates (2011 and 2012) however, are lower than all previous estimates (1979-1981, 1989-1992 and 2003), indicating a possible long-term impact. Quantification of the spatial and temporal partitioning of wildlife behavioural schedules provides critical insight for conservation measures that aim to mitigate the effects of human disturbance.

Barrier screens: a method to sample blood-fed and host-seeking exophilic mosquitoes

PubMed Central

2013-01-01

Background Determining the proportion of blood meals on humans by outdoor-feeding and resting mosquitoes is challenging. This is largely due to the difficulty of finding an adequate and unbiased sample of resting, engorged mosquitoes to enable the identification of host blood meal sources. This is particularly difficult in the south-west Pacific countries of Indonesia, the Solomon Islands and Papua New Guinea where thick vegetation constitutes the primary resting sites for the exophilic mosquitoes that are the primary malaria and filariasis vectors. Methods Barrier screens of shade-cloth netting attached to bamboo poles were constructed between villages and likely areas where mosquitoes might seek blood meals or rest. Flying mosquitoes, obstructed by the barrier screens, would temporarily stop and could then be captured by aspiration at hourly intervals throughout the night. Results In the three countries where this method was evaluated, blood-fed females of Anopheles farauti, Anopheles bancroftii, Anopheles longirostris, Anopheles sundaicus, Anopheles vagus, Anopheles kochi, Anopheles annularis, Anopheles tessellatus, Culex vishnui, Culex quinquefasciatus and Mansonia spp were collected while resting on the barrier screens. In addition, female Anopheles punctulatus and Armigeres spp as well as male An. farauti, Cx. vishnui, Cx. quinquefasciatus and Aedes species were similarly captured. Conclusions Building barrier screens as temporary resting sites in areas where mosquitoes were likely to fly was an extremely time-effective method for collecting an unbiased representative sample of engorged mosquitoes for determining the human blood index. PMID:23379959

The broadband social acoustic signaling behavior of spinner and spotted dolphins

NASA Astrophysics Data System (ADS)

Lammers, Marc O.; Au, Whitlow W. L.; Herzing, Denise L.

2003-09-01

Efforts to study the social acoustic signaling behavior of delphinids have traditionally been restricted to audio-range (<20 kHz) analyses. To explore the occurrence of communication signals at ultrasonic frequencies, broadband recordings of whistles and burst pulses were obtained from two commonly studied species of delphinids, the Hawaiian spinner dolphin (Stenella longirostris) and the Atlantic spotted dolphin (Stenella frontalis). Signals were quantitatively analyzed to establish their full bandwidth, to identify distinguishing characteristics between each species, and to determine how often they occur beyond the range of human hearing. Fundamental whistle contours were found to extend beyond 20 kHz only rarely among spotted dolphins, but with some regularity in spinner dolphins. Harmonics were present in the majority of whistles and varied considerably in their number, occurrence, and amplitude. Many whistles had harmonics that extended past 50 kHz and some reached as high as 100 kHz. The relative amplitude of harmonics and the high hearing sensitivity of dolphins to equivalent frequencies suggest that harmonics are biologically relevant spectral features. The burst pulses of both species were found to be predominantly ultrasonic, often with little or no energy below 20 kHz. The findings presented reveal that the social signals produced by spinner and spotted dolphins span the full range of their hearing sensitivity, are spectrally quite varied, and in the case of burst pulses are probably produced more frequently than reported by audio-range analyses.

The broadband social acoustic signaling behavior of spinner and spotted dolphins.

PubMed

Lammers, Marc O; Au, Whitlow W L; Herzing, Denise L

2003-09-01

Efforts to study the social acoustic signaling behavior of delphinids have traditionally been restricted to audio-range (<20 kHz) analyses. To explore the occurrence of communication signals at ultrasonic frequencies, broadband recordings of whistles and burst pulses were obtained from two commonly studied species of delphinids, the Hawaiian spinner dolphin (Stenella longirostris) and the Atlantic spotted dolphin (Stenella frontalis). Signals were quantitatively analyzed to establish their full bandwidth, to identify distinguishing characteristics between each species, and to determine how often they occur beyond the range of human hearing. Fundamental whistle contours were found to extend beyond 20 kHz only rarely among spotted dolphins, but with some regularity in spinner dolphins. Harmonics were present in the majority of whistles and varied considerably in their number, occurrence, and amplitude. Many whistles had harmonics that extended past 50 kHz and some reached as high as 100 kHz. The relative amplitude of harmonics and the high hearing sensitivity of dolphins to equivalent frequencies suggest that harmonics are biologically relevant spectral features. The burst pulses of both species were found to be predominantly ultrasonic, often with little or no energy below 20 kHz. The findings presented reveal that the social signals produced by spinner and spotted dolphins span the full range of their hearing sensitivity, are spectrally quite varied, and in the case of burst pulses are probably produced more frequently than reported by audio-range analyses.

THE MARINE MAMMAL FAUNA OF POTENTIAL OTEC SITES IN THE GULF OF MEXICO AND HAWAII

DOE Office of Scientific and Technical Information (OSTI.GOV)

Payne, S.F.

1979-05-01

Twenty-seven marine mammal species have been recorded for the Gulf of Mexico, including 7 Mysticetes or baleen whales, 17 Odontocetes or toothed whales, 1 Sirenian (manatee), and 1 or 2 Pinnipeds or seals. The most common species in the Gulf is Tursiops truncatus, the bottlenosed dolphin, an inshore species. Offshore, Stenella plagiodon, the spotted dolphin, is fairly common. Most other species are recorded from very few sightings or strandings. None of the endangered species is common in potential OTEC sites in the Gulf of Mexico. Twenty-two marine mammals may occur in Hawaii; 2 Mystecetes, 19 Odonotocetes, and the endemic monkmore » seal. The monk seal (Monachus schauinslandi), an endangered species, lives in the extreme northwestern island chain away from potential OTEC sites. Among the most common cetaceans in Hawaii is the endangered humpback whale (Megaptera novaeangliae). Stenella longirostris, the spinner dolphin; and Tursiops sp., the bottlenosed dolphin are also fairly common. The baleen whales feed on zooplankton during the summer in polar waters, and are migratory, while the toothed whales feed mainly on fish and squid, and are found in temperate or tropical regions year-round. The manatee is vegetarian and the pinnipeds are fish- or squid-eaters. Environmental effects of OTEC which may affect mammals are: toxic effects of biocide release or ammonia spill, biostimulating effects of seawater redistribution, oil spills, or effects of the physical presence of OTEC plants.« less

Combining citizen science species distribution models and stable isotopes reveals migratory connectivity in the secretive Virginia rail

USGS Publications Warehouse

Fournier, Auriel M. V.; Sullivan, Alexis R.; Bump, Joseph K.; Perkins, Marie; Shieldcastle, Mark C.; King, Sammy L.

2017-01-01

Stable hydrogen isotope (δD) methods for tracking animal movement are widely used yet often produce low resolution assignments. Incorporating prior knowledge of abundance, distribution or movement patterns can ameliorate this limitation, but data are lacking for most species. We demonstrate how observations reported by citizen scientists can be used to develop robust estimates of species distributions and to constrain δD assignments.We developed a Bayesian framework to refine isotopic estimates of migrant animal origins conditional on species distribution models constructed from citizen scientist observations. To illustrate this approach, we analysed the migratory connectivity of the Virginia rail Rallus limicola, a secretive and declining migratory game bird in North America.Citizen science observations enabled both estimation of sampling bias and construction of bias-corrected species distribution models. Conditioning δD assignments on these species distribution models yielded comparably high-resolution assignments.Most Virginia rails wintering across five Gulf Coast sites spent the previous summer near the Great Lakes, although a considerable minority originated from the Chesapeake Bay watershed or Prairie Pothole region of North Dakota. Conversely, the majority of migrating Virginia rails from a site in the Great Lakes most likely spent the previous winter on the Gulf Coast between Texas and Louisiana.Synthesis and applications. In this analysis, Virginia rail migratory connectivity does not fully correspond to the administrative flyways used to manage migratory birds. This example demonstrates that with the increasing availability of citizen science data to create species distribution models, our framework can produce high-resolution estimates of migratory connectivity for many animals, including cryptic species. Empirical evidence of links between seasonal habitats will help enable effective habitat management, hunting quotas and population monitoring and

Secretive marsh aird species co-eccurrences and habitat associations across the midwest, USA

USGS Publications Warehouse

Bolenbaugh, Jason R.; Krementz, David G.; Lehnen, Sarah E.

2011-01-01

Because secretive marsh birds are difficult to detect, population status and habitat use for these birds are not well known. We conducted repeated surveys for secretive marsh birds across 264 sites in the Upper Mississippi River and Great Lakes Joint Venture region to estimate abundance, occupancy, and detection probabilities during the 2008 and 2009 breeding seasons. We identified species groups based on observed species co-occurrences. Two species, least bittern Ixobrychus exilis and American bittern Botaurus lentiginosus, co-occurred with other species less often than expected by chance, and two species groups, rails (Virginia rail Rallus limicola and sora Porzana carolina) and open-water birds (pied-billed grebe Podilymbus podiceps, common moorhen Gallinula chloropus, and American coot Fulica americana; coots were only surveyed in 2009), co-occurred more often than expected by chance. These groupings were consistent between years. We then estimated the relation of these species and groups to landscape and local site characteristics by using zero-inflated abundance models that accounted for incomplete detection. At the landscape level (5-km radius), the amount of emergent herbaceous wetland was positively associated with least bittern occupancy, whereas the amount of woody wetland was negatively associated with least bittern, rail, and open-water bird occupancy. At the local level, habitat variables that were associated with abundance were not consistent among groups or between years, with the exception that both least bitterns and open-water birds had a strong positive association between abundance and water-vegetation interspersion. Land managers interested in marsh bird management or conservation may want to consider focusing efforts on landscapes with high amounts of emergent herbaceous wetland and low amounts of woody wetland, and managing for high amounts of water-vegetation interspersion within the wetland.

Predictors of specialist avifaunal decline in coastal marshes.

PubMed

Correll, Maureen D; Wiest, Whitney A; Hodgman, Thomas P; Shriver, W Gregory; Elphick, Chris S; McGill, Brian J; O'Brien, Kathleen M; Olsen, Brian J

2017-02-01

Coastal marshes are one of the world's most productive ecosystems. Consequently, they have been heavily used by humans for centuries, resulting in ecosystem loss. Direct human modifications such as road crossings and ditches and climatic stressors such as sea-level rise and extreme storm events have the potential to further degrade the quantity and quality of marsh along coastlines. We used an 18-year marsh-bird database to generate population trends for 5 avian species (Rallus crepitans, Tringa semipalmata semipalmata, Ammodramus nelsonii subvirgatus, Ammodramus caudacutus, and Ammodramus maritimus) that breed almost exclusively in tidal marshes, and are potentially vulnerable to marsh degradation and loss as a result of anthropogenic change. We generated community and species trends across 3 spatial scales and explored possible drivers of the changes we observed, including marsh ditching, tidal restriction through road crossings, local rates of sea-level rise, and potential for extreme flooding events. The specialist community showed negative trends in tidally restricted marshes (-2.4% annually from 1998 to 2012) but was stable in unrestricted marshes across the same period. At the species level, we found negative population trends in 3 of the 5 specialist species, ranging from -4.2% to 9.0% annually. We suggest that tidal restriction may accelerate degradation of tidal marsh resilience to sea-level rise by limiting sediment supply necessary for marsh accretion, resulting in specialist habitat loss in tidally restricted marshes. Based on our findings, we predict a collapse of the global population of Saltmarsh Sparrows (A. caudacutus) within the next 50 years and suggest that immediate conservation action is needed to prevent extinction of this species. We also suggest mitigation actions to restore sediment supply to coastal marshes to help sustain this ecosystem into the future. © 2016 Society for Conservation Biology.

Impact of Vector Dispersal and Host-Plant Fidelity on the Dissemination of an Emerging Plant Pathogen

PubMed Central

Johannesen, Jes; Foissac, Xavier; Kehrli, Patrik; Maixner, Michael

2012-01-01

Dissemination of vector-transmitted pathogens depend on the survival and dispersal of the vector and the vector's ability to transmit the pathogen, while the host range of vector and pathogen determine the breath of transmission possibilities. In this study, we address how the interaction between dispersal and plant fidelities of a pathogen (stolbur phytoplasma tuf-a) and its vector (Hyalesthes obsoletus: Cixiidae) affect the emergence of the pathogen. Using genetic markers, we analysed the geographic origin and range expansion of both organisms in Western Europe and, specifically, whether the pathogen's dissemination in the northern range is caused by resident vectors widening their host-plant use from field bindweed to stinging nettle, and subsequent host specialisation. We found evidence for common origins of pathogen and vector south of the European Alps. Genetic patterns in vector populations show signals of secondary range expansion in Western Europe leading to dissemination of tuf-a pathogens, which might be newly acquired and of hybrid origin. Hence, the emergence of stolbur tuf-a in the northern range was explained by secondary immigration of vectors carrying stinging nettle-specialised tuf-a, not by widening the host-plant spectrum of resident vectors with pathogen transmission from field bindweed to stinging nettle nor by primary co-migration from the resident vector's historical area of origin. The introduction of tuf-a to stinging nettle in the northern range was therefore independent of vector's host-plant specialisation but the rapid pathogen dissemination depended on the vector's host shift, whereas the general dissemination elsewhere was linked to plant specialisation of the pathogen but not of the vector. PMID:23284774

Impact of vector dispersal and host-plant fidelity on the dissemination of an emerging plant pathogen.

PubMed

Johannesen, Jes; Foissac, Xavier; Kehrli, Patrik; Maixner, Michael

2012-01-01

Dissemination of vector-transmitted pathogens depend on the survival and dispersal of the vector and the vector's ability to transmit the pathogen, while the host range of vector and pathogen determine the breath of transmission possibilities. In this study, we address how the interaction between dispersal and plant fidelities of a pathogen (stolbur phytoplasma tuf-a) and its vector (Hyalesthes obsoletus: Cixiidae) affect the emergence of the pathogen. Using genetic markers, we analysed the geographic origin and range expansion of both organisms in Western Europe and, specifically, whether the pathogen's dissemination in the northern range is caused by resident vectors widening their host-plant use from field bindweed to stinging nettle, and subsequent host specialisation. We found evidence for common origins of pathogen and vector south of the European Alps. Genetic patterns in vector populations show signals of secondary range expansion in Western Europe leading to dissemination of tuf-a pathogens, which might be newly acquired and of hybrid origin. Hence, the emergence of stolbur tuf-a in the northern range was explained by secondary immigration of vectors carrying stinging nettle-specialised tuf-a, not by widening the host-plant spectrum of resident vectors with pathogen transmission from field bindweed to stinging nettle nor by primary co-migration from the resident vector's historical area of origin. The introduction of tuf-a to stinging nettle in the northern range was therefore independent of vector's host-plant specialisation but the rapid pathogen dissemination depended on the vector's host shift, whereas the general dissemination elsewhere was linked to plant specialisation of the pathogen but not of the vector.

Repellent effect of topical deltamethrin on blood feeding by Culicoides on horses.

PubMed

Robin, M; Archer, D; McGowan, C; Garros, C; Gardès, L; Baylis, M

2015-05-30

African horse sickness (AHS) is a vectorborne disease spread by Culicoides biting midges. The UK's Department for Environment, Food and Rural Affairs currently suggests using topical deltamethrin for AHS control; however, no data are available regarding its efficacy in the horse. The aims of this study were to investigate the effect of topical deltamethrin on blood feeding by Culicoides on horses and to investigate which Culicoides species blood fed on horses. Three pairs of horses were placed in partially enclosed cages that allowed samples representing the Culicoides interacting with individual horses to be sampled. Four data collection sessions were completed before one horse from each pair was topically treated with 10 ml of 1 per cent deltamethrin solution and another four sessions were then carried out. Collected Culicoides were identified and each biting midge examined to see if it had blood fed. The most abundant species collected were C. chiopterus, C. dewulfi, C. obsoletus and C. scoticus (44.3 per cent) and either C. pulicaris or C. punctatus (34.7 per cent). These species were also more likely to have blood fed than other species, supporting their potential role as AHS vectors if the virus were to reach the UK. There was no significant effect of treatment on blood feeding by Culicoides. The results do not support the use of topical deltamethrin to prevent blood feeding by Culicoides on individual horses; however, the study does not investigate the effect that the widespread use of topical deltamethrin might have on vector numbers or disease transmission from viraemic individuals during an outbreak of AHS. British Veterinary Association.

Assessing Disease and Mortality among Small Cetaceans Stranded at a World Heritage Site in Southern Brazil

PubMed Central

Domiciano, Isabela G.; Domit, Camila; Broadhurst, Matt K.; Koch, Mariana S.; Bracarense, Ana Paula F. R. L.

2016-01-01

Cetaceans are considered environmental sentinels and their health often reflects either anthropogenic or natural spatio-temporal disturbances. This study investigated the pathological findings and mortality of small cetaceans with the aim of detecting hazards and monitoring health trends in a high-biodiversity area. Between 2007 and 2012, 218 stranded cetaceans were recorded on the Paraná coast, southern Brazil. Fifty-seven (26.1%) of these animals, including 50 Sotalia guianensis, 2 Pontoporia blainvillei, 2 Stenella frontalis, 1 Stenella longirostris, 1 Tursiops truncatus and 1 Globicephala melas were necropsied and samples were collected for histopathology. Causes of death were determined in 46 of the 57 (80.7%) animals and most (30 or 65.2%) were ascribed to anthropogenic activities, including fisheries bycatch (28/30) and trauma (2/30). The remaining 16 fatalities were considered natural, and attributed to pneumonia (10/16), emaciation (3/16), septicemia (1/16), neonatal pathology (1/16) and choking via food obstruction (1/16). Irrespective of the cause, bronchointerstitial pneumonia, associated with parasitism, lymphadenitis and membranous glomerulonephritis were common findings among all fatalities. These results suggest, that while anthropogenic activities are a leading cause of cetacean strandings in Paraná, underlying pre-existing diseases may contribute towards deaths. Although the studied area is considered a biosphere reserve by UNESCO, complex anthropogenic and natural interactions might be occurring, increasing cetacean susceptibility to hazards. This study may help facilitate developing an effective conservation plan for coastal cetaceans focusing on reducing fisheries interactions, habitat degradation and pollution as mechanisms for ultimately increasing species resilience. PMID:26871703

An RFID Based Smart Feeder for Hummingbirds.

PubMed

Ibarra, Vicente; Araya-Salas, Marcelo; Tang, Yu-ping; Park, Charlie; Hyde, Anthony; Wright, Timothy F; Tang, Wei

2015-12-16

We present an interdisciplinary effort to record feeding behaviors and control the diet of a hummingbird species (Phaethornis longirostris, the long-billed hermit or LBH) by developing a Radio Frequency Identification (RFID) based smart feeder. The system contains an RFID reader, a microcontroller, and a servo-controlled hummingbird feeder opener; the system is presented as a tool for studying the cognitive ability of the LBH species. When equipped with glass capsule RFID tags (which are mounted on the hummingbird), the smart feeder can provide specific diets for predetermined sets of hummingbirds at the discretion of biologists. This is done by reading the unique RFID tag on the hummingbirds and comparing the ID number with the pre-programmed ID numbers stored in the smart feeder. The smart feeder records the time and ID of each hummingbird visit. The system data is stored in a readily available SD card and is powered by two 9 V batteries. The detection range of the system is approximately 9-11 cm. Using this system, biologists can assign the wild hummingbirds to different experimental groups and monitor their diets to determine if they develop a preference to any of the available nectars. During field testing, the smart feeder system has demonstrated consistent detection (when compared to detections observed by video-recordings) of RFID tags on hummingbirds and provides pre-designed nectars varying water and sugar concentrations to target individuals. The smart feeder can be applied to other biological and environmental studies in the future.

An RFID Based Smart Feeder for Hummingbirds

PubMed Central

Ibarra, Vicente; Araya-Salas, Marcelo; Tang, Yu-ping; Park, Charlie; Hyde, Anthony; Wright, Timothy F.; Tang, Wei

2015-01-01

We present an interdisciplinary effort to record feeding behaviors and control the diet of a hummingbird species (Phaethornis longirostris, the long-billed hermit or LBH) by developing a Radio Frequency Identification (RFID) based smart feeder. The system contains an RFID reader, a microcontroller, and a servo-controlled hummingbird feeder opener; the system is presented as a tool for studying the cognitive ability of the LBH species. When equipped with glass capsule RFID tags (which are mounted on the hummingbird), the smart feeder can provide specific diets for predetermined sets of hummingbirds at the discretion of biologists. This is done by reading the unique RFID tag on the hummingbirds and comparing the ID number with the pre-programmed ID numbers stored in the smart feeder. The smart feeder records the time and ID of each hummingbird visit. The system data is stored in a readily available SD card and is powered by two 9 V batteries. The detection range of the system is approximately 9–11 cm. Using this system, biologists can assign the wild hummingbirds to different experimental groups and monitor their diets to determine if they develop a preference to any of the available nectars. During field testing, the smart feeder system has demonstrated consistent detection (when compared to detections observed by video-recordings) of RFID tags on hummingbirds and provides pre-designed nectars varying water and sugar concentrations to target individuals. The smart feeder can be applied to other biological and environmental studies in the future. PMID:26694402

Aridity promotes bet hedging via delayed hatching: a case study with two temporary pond crustaceans along a latitudinal gradient.

PubMed

Pinceel, Tom; Vanschoenwinkel, Bram; Hawinkel, Wouter; Tuytens, Karen; Brendonck, Luc

2017-05-01

Climate change does affect not only average rainfall and temperature but also their variation, which can reduce the predictability of suitable conditions for growth and reproduction. This situation is problematic for inhabitants of temporary waters whose reproductive success depends on rainfall and evaporation that determine the length of the aquatic phase. For organisms with long-lived dormant life stages, bet hedging models suggest that a fraction of these should stay dormant during each growing season to buffer against the probability of total reproductive failure in variable environments. Thus far, however, little empirical evidence supports this prediction in aquatic organisms. We study geographic variation in delayed hatching of dormant eggs in natural populations of two crustaceans, Branchinella longirostris and Paralimnadia badia, that occur in temporary rock pools along a 725 km latitudinal aridity gradient in Western Australia. Consistent with bet hedging theory, populations of both species were characterised by delayed hatching under common garden conditions and hatching fractions decreased towards the drier end of the gradient where the probability of reproductive success was shown to be lower. This decrease was most pronounced in the species with the longer maturation time, presumably because it is more sensitive to the higher prevalence of short inundations. Overall, these findings illustrate that regional variation in climate can be reflected in differential investment in bet hedging and hints at a higher importance of delayed hatching to persist when the climate becomes harsher. Such strategies could become exceedingly relevant as determinants of vulnerability under climate change.

Thirty-seventh supplement to the American Ornithologists' Union Check-list of North American birds

USGS Publications Warehouse

Monroe, Burt L.; Banks, Richard C.; Fitzpatrick, John W.; Howell, Thomas R.; Johnson, Ned K.; Ouellet, Henri; Remsen, J.V.; Storer, Robert W.

1989-01-01

This third supplement subsequent to the 6th edition (1983) of the A.O.U. "Check-list of North American Birds" consists of changes adopted by the Committee on Classification and Nomenclature as of 1 March 1989. The changes fall into nine categories: (1) six species are added to the main list (Pterodroma longirostris, Larus crassirostris, Streptopelia decaocto, Cocccyzus julieni, Chrysolampis mosquitus, Emberiza aureola) because of new distributional information; (2) five species (Ara cubensis, Chlorostilbon bracei, Empidonax occidentalis, Polioptila californica, Pipilo crissalis) are added to the main list because of the splitting of species already on the list; (3) one name (Anthus rubescens) is changed because of the splitting of a species from outside the Checklist area; (4) two names (Morus bassanus, Nyctanassa violacea) is removed from the main list to Appendix B because of re-evaluation of Northern Hemisphere records; (6) three species (Pterodrama rostrata, P. alba, P. solandri) are moved from Appendix A to Appendix B, and one (P. defilippiana) is added to Appendix B because of questionable sight records; (7)A.O.U. numbers are added to three species (Ciccaba virgata, Myiopagis viridicata, Molothrus bonariensis) on the basis on new distributional records or supporting data; (8) several corrections in spelling or citations are made; and (9) English names are changed for twelve species to accommodate worldwide usage of these names. No new distributional information is included except as indicated above (i.e. minor changes of distribution are not noted). These actions bring the number of species recognized as occurring in North America (main list) to 1,945.

Changes in seasonal nearshore zooplankton abundance patterns in Lake Ontario following establishment of the exotic predator Cercopagis pengoi

USGS Publications Warehouse

Warner, David M.; Rudstam, Lars G.; Benoit, Hugues; Mills, Edward L.; Johannsson, Ora E.

2006-01-01

Cercopagis pengoi, a zooplanktivore first discovered in Lake Ontario in 1998, may reduce availability of prey for planktivorous fish. Cercoapgis pengoi is most abundant in late summer and fall. Therefore, we hypothesized that abundance of small zooplankton (bosminids and cyclopoids) species would decrease at that time. To determine if the establishment of C. pengoi was followed by changes in the zooplankton community, seasonal patterns in nearshore zooplankton collected from May to October 1995–2000 were examined. Early summer density of small zooplankton was similar in all years while late summer and fall densities were significantly lower in 1998–2000 than in 1995–1997. The declines of small zooplankton coincided seasonally with the peak in C. pengoidensity. Other possible causes for the observed changes in small zooplankton are less likely. High levels of fish predation should have resulted in smaller zooplankton in 1998–2000 than in 1995–1997 and larger declines in Daphnia than other groups. This was not observed. There was no significant decline in chlorophyll-a concentrations or changes in temperature between 1995–1997 and 1998–2000. Therefore, the declines in density of small zooplankton were most likely the result of C. pengoi predation. The effect of C. pengoi establishment on alewives is increased competition for zooplankton prey but C. pengoi has replaced a portion of the zooplankton biomass and adult alewife diet formerly dominated by Diacyclops thomasi and Bosmina longirostris.

Trophic Relationships and Habitat Preferences of Delphinids from the Southeastern Brazilian Coast Determined by Carbon and Nitrogen Stable Isotope Composition

PubMed Central

Bisi, Tatiana Lemos; Dorneles, Paulo Renato; Lailson-Brito, José; Lepoint, Gilles; Azevedo, Alexandre de Freitas; Flach, Leonardo; Malm, Olaf; Das, Krishna

2013-01-01

To investigate the foraging habitats of delphinids in southeastern Brazil, we analyzed stable carbon (δ13C) and nitrogen (δ15N) isotopes in muscle samples of the following 10 delphinid species: Sotalia guianensis, Stenella frontalis, Tursiops truncatus, Steno bredanensis, Pseudorca crassidens, Delphinus sp., Lagenodelphis hosei, Stenella attenuata, Stenella longirostris and Grampus griseus. We also compared the δ13C and δ15N values among four populations of S. guianensis. Variation in carbon isotope results from coast to ocean indicated that there was a significant decrease in δ13C values from estuarine dolphins to oceanic species. S. guianensis from Guanabara Bay had the highest mean δ13C value, while oceanic species showed significantly lower δ13C values. The highest δ15N values were observed for P. crassidens and T. truncatus, suggesting that these species occupy the highest trophic position among the delphinids studied here. The oceanic species S. attenuata, G. griseus and L. hosei had the lowest δ15N values. Stable isotope analysis showed that the three populations of S. guianensis in coastal bays had different δ13C values, but similar δ15N results. Guiana dolphins from Sepetiba and Ilha Grande bays had different foraging habitat, with specimens from Ilha Grande showing more negative δ13C values. This study provides further information on the feeding ecology of delphinids occurring in southeastern Brazil, with evidence of distinctive foraging habitats and the occupation of different ecological niches by these species in the study area. PMID:24358155

Characteristics of hearing and echolocation in under-studied odontocete species

NASA Astrophysics Data System (ADS)

Smith, Adam B.

All odontoctes (toothed whales and dolphins) studied to date have been shown to echolocate. They use sound as their primary means for foraging, navigation, and communication with conspecifics and are thus considered acoustic specialists. However, the vast majority of what is known about odontocete acoustic systems comes from only a handful of the 76 recognized extant species. The research presented in this dissertation investigated basic characteristics of odontocete hearing and echolocation, including auditory temporal resolution, auditory pathways, directional hearing, and transmission beam characteristics, in individuals of five different odontocete species that are understudied. Modulation rate transfer functions were measured from formerly stranded individuals of four different species (Stenella longirostris, Feresa attenuata, Globicephala melas, Mesoplodon densirostris) using non-invasive auditory evoked potential methods. All individuals showed acute auditory temporal resolution that was comparable to other studied odontocete species. Using the same electrophysiological methods, auditory pathways and directional hearing were investigated in a Risso's dolphin (Grampus griseus) using both localized and far-field acoustic stimuli. The dolphin's hearing showed significant, frequency dependent asymmetry to localized sound presented on the right and left sides of its head. The dolphin also showed acute, but mostly symmetrical, directional auditory sensitivity to sounds presented in the far-field. Furthermore, characteristics of the echolocation transmission beam of this same individual Risso's dolphin were measured using a 16 element hydrophone array. The dolphin exhibited both single and dual lobed beam shapes that were more directional than similar measurements from a bottlenose dolphin, harbor porpoise, and false killer whale.

Survival relative to new and ancestral host plants, phytoplasma infection, and genetic constitution in host races of a polyphagous insect disease vector

PubMed Central

Maixner, Michael; Albert, Andreas; Johannesen, Jes

2014-01-01

Dissemination of vectorborne diseases depends strongly on the vector's host range and the pathogen's reservoir range. Because vectors interact with pathogens, the direction and strength of a vector's host shift is vital for understanding epidemiology and is embedded in the framework of ecological specialization. This study investigates survival in host-race evolution of a polyphagous insect disease vector, Hyalesthes obsoletus, whether survival is related to the direction of the host shift (from field bindweed to stinging nettle), the interaction with plant-specific strains of obligate vectored pathogens/symbionts (stolbur phytoplasma), and whether survival is related to genetic differentiation between the host races. We used a twice repeated, identical nested experimental design to study survival of the vector on alternative hosts and relative to infection status. Survival was tested with Kaplan–Meier analyses, while genetic differentiation between vector populations was quantified with microsatellite allele frequencies. We found significant direct effects of host plant (reduced survival on wrong hosts) and sex (males survive longer than females) in both host races and relative effects of host (nettle animals more affected than bindweed animals) and sex (males more affected than females). Survival of bindweed animals was significantly higher on symptomatic than nonsymptomatic field bindweed, but in the second experiment only. Infection potentially had a positive effect on survival in nettle animals but due to low infection rates the results remain suggestive. Genetic differentiation was not related to survival. Greater negative plant-transfer effect but no negative effect of stolbur in the derived host race suggests preadaptation to the new pathogen/symbiont strain before strong diversifying selection during the specialization process. Physiological maladaptation or failure to accept the ancestral plant will have similar consequences, namely positive assortative

Vision in semi-aquatic snakes: Intraocular morphology, accommodation, and eye: Body allometry

NASA Astrophysics Data System (ADS)

Plylar, Helen Bond

Vision in vertebrates generally relies on the refractive power of the cornea and crystalline lens to facilitate vision. Light from the environment enters the eye and is refracted by the cornea and lens onto the retina for production of an image. When an animal with a system designed for air submerges underwater, the refractive power of the cornea is lost. Semi-aquatic animals (e.g., water snakes, turtles, aquatic mammals) must overcome this loss of corneal refractive power through visual accommodation. Accommodation relies on change of the position or shape of the lens to change the focal length of the optical system. Intraocular muscles and fibers facilitate lenticular displacement and deformation. Snakes, in general, are largely unstudied in terms of visual acuity and intraocular morphology. I used light microscopy and scanning electron microscopy to examine differences in eye anatomy between five sympatric colubrid snake species (Nerodia cyclopion, N. fasciata, N. rhombifer, Pantherophis obsoletus, and Thamnophis proximus) from Southeast Louisiana. I discovered previously undescribed structures associated with the lens in semi-aquatic species. Photorefractive methods were used to assess refractive error. While all species overcame the expected hyperopia imposed by submergence, there was interspecific variation in refractive error. To assess scaling of eye size with body size, I measure of eye size, head size, and body size in Nerodia cyclopion and N. fasciata from the SLU Vertebrate Museum. In both species, body size increases at a significantly faster rate than head size and eye size (negative allometry). Small snakes have large eyes relative to body size, and large snakes have relatively small eyes. There were interspecific differences in scaling of eye size with body size, where N. fasciata had larger eye diameter, but N. cyclopion had longer eyes (axial length).

Survival relative to new and ancestral host plants, phytoplasma infection, and genetic constitution in host races of a polyphagous insect disease vector.

PubMed

Maixner, Michael; Albert, Andreas; Johannesen, Jes

2014-08-01

Dissemination of vectorborne diseases depends strongly on the vector's host range and the pathogen's reservoir range. Because vectors interact with pathogens, the direction and strength of a vector's host shift is vital for understanding epidemiology and is embedded in the framework of ecological specialization. This study investigates survival in host-race evolution of a polyphagous insect disease vector, Hyalesthes obsoletus, whether survival is related to the direction of the host shift (from field bindweed to stinging nettle), the interaction with plant-specific strains of obligate vectored pathogens/symbionts (stolbur phytoplasma), and whether survival is related to genetic differentiation between the host races. We used a twice repeated, identical nested experimental design to study survival of the vector on alternative hosts and relative to infection status. Survival was tested with Kaplan-Meier analyses, while genetic differentiation between vector populations was quantified with microsatellite allele frequencies. We found significant direct effects of host plant (reduced survival on wrong hosts) and sex (males survive longer than females) in both host races and relative effects of host (nettle animals more affected than bindweed animals) and sex (males more affected than females). Survival of bindweed animals was significantly higher on symptomatic than nonsymptomatic field bindweed, but in the second experiment only. Infection potentially had a positive effect on survival in nettle animals but due to low infection rates the results remain suggestive. Genetic differentiation was not related to survival. Greater negative plant-transfer effect but no negative effect of stolbur in the derived host race suggests preadaptation to the new pathogen/symbiont strain before strong diversifying selection during the specialization process. Physiological maladaptation or failure to accept the ancestral plant will have similar consequences, namely positive assortative

Comparison of Vertebrate Cytochrome b and Prepronociceptin for Blood Meal Analyses in Culicoides

PubMed Central

Hadj-Henni, Leila; De Meulemeester, Thibaut; Depaquit, Jérôme; Noël, Philippe; Germain, Adeline; Helder, Remi; Augot, Denis

2015-01-01

To date, studies on host preferences and blood meal identification have been conducted for Culicoides species using molecular-based methods such as PCR techniques to amplify only a fragment from universal vertebrate mitochondrial genes such as cytochrome c oxidase subunit I or cytochrome b (Cyt b). The vertebrate prepronociceptin gene (PNOC) was also tested in this field. However, the choice of molecular marker to identify blood meal is critical. The objective of our study is to compare the ability of Cyt b and PNOC as molecular markers for blood meal identification depending on the stage of blood meal digestion. In order to determine whether these Cyt b and PNOC could provide a positive result, 565 blood-fed females of Culicoides spp were collected and morphologically identified. The samples were collected between 2012 and 2014, in two localities in France. The collection localities were near either livestock or a forest. To catch the specimens, we used UV CDC miniature light traps. PNOC sequence of donkeys (Equus asinus) was sequenced and submitted because it was missing in GenBank. Our findings emphasize that the PNOC marker is not suitable to separate closely related Equid species such as horses and donkeys. The Cyt b marker was able to identify 204 more samples when compared to PNOC (99.55% of specimens). Cyt b appears to be better able to detect the origin of blood meals from females with digested blood in their abdomens. We conclude that Cyt b is a good marker as it increases the accuracy of blood meal identification of engorged females containing digested blood in their abdomens. The host opportunist behavior of Culicoides, especially that of C. obsoletus and C. scoticus, the main vectors of BTV in Europe was also highlighted. PMID:26664944

Food habits of Juvenile American Shad and dynamics of zooplankton in the lower Columbia River

USGS Publications Warehouse

Haskell, C.A.; Tiffan, K.F.; Rondorf, D.W.

2006-01-01

As many as 2.4 million adult American shad annually pass John Day Dam, Columbia River to spawn upriver, yet food web interactions of juvenile shad rearing in John Day Reservoir are unexplored. We collected zooplankton and conducted mid-water trawls in McNary (June-July) and John Day reservoirs (August-November) from 1994 through 1996 during the outmigration of subyearling American shad and Chinook salmon. Juvenile American shad were abundant and represented over 98% of the trawl catch in late summer. The five major taxa collected in zooplankton tows were Bosmina longirostris, Daphnia, cyclopoid cope-pods, rotifers, and calanoid copepods. We evaluated total crustacean zooplankton abundance and Daphnia biomass in relation to water temperature, flow, depth, diel period, and cross-sectional location using multiple regression. Differences in zooplankton abundance were largely due to differences in water temperature and flow. Spatial variation in total zooplankton abundance was observed in McNary Reservoir, but not in John Day Reservoir. Juvenile American shad generally fed on numerically abundant prey, despite being less preferred than larger bodied zooplankton. A decrease in cladoceran abundance and size in August coupled with large percentages of Daphnia in juvenile American shad stomachs indicated heavy planktivory. Smaller juvenile American shad primarily fed on Daphnia in August, but switched to more evasive copepods as the mean size of fish increased and Daphnia abundance declined. Because Daphnia are particularly important prey items for subyearling Chinook salmon in mainstem reservoirs in mid to late summer, alterations in the cladoceran food base is of concern for the management of outmigrating salmonids and other Columbia River fishes. ?? 2006 by the Northwest Scientific Association. All rights reserved.

Estimating In Situ Zooplankton Non-Predation Mortality in an Oligo-Mesotrophic Lake from Sediment Trap Data: Caveats and Reality Check

PubMed Central

Dubovskaya, Olga P.; Tang, Kam W.; Gladyshev, Michail I.; Kirillin, Georgiy; Buseva, Zhanna; Kasprzak, Peter; Tolomeev, Aleksandr P.; Grossart, Hans-Peter

2015-01-01

Background Mortality is a main driver in zooplankton population biology but it is poorly constrained in models that describe zooplankton population dynamics, food web interactions and nutrient dynamics. Mortality due to non-predation factors is often ignored even though anecdotal evidence of non-predation mass mortality of zooplankton has been reported repeatedly. One way to estimate non-predation mortality rate is to measure the removal rate of carcasses, for which sinking is the primary removal mechanism especially in quiescent shallow water bodies. Objectives and Results We used sediment traps to quantify in situ carcass sinking velocity and non-predation mortality rate on eight consecutive days in 2013 for the cladoceran Bosmina longirostris in the oligo-mesotrophic Lake Stechlin; the outcomes were compared against estimates derived from in vitro carcass sinking velocity measurements and an empirical model correcting in vitro sinking velocity for turbulence resuspension and microbial decomposition of carcasses. Our results show that the latter two approaches produced unrealistically high mortality rates of 0.58-1.04 d-1, whereas the sediment trap approach, when used properly, yielded a mortality rate estimate of 0.015 d-1, which is more consistent with concurrent population abundance data and comparable to physiological death rate from the literature. Ecological implications Zooplankton carcasses may be exposed to water column microbes for days before entering the benthos; therefore, non-predation mortality affects not only zooplankton population dynamics but also microbial and benthic food webs. This would be particularly important for carbon and nitrogen cycles in systems where recurring mid-summer decline of zooplankton population due to non-predation mortality is observed. PMID:26146995

Prevalence and Intensity of Clonorchis sinensis Metacercariae in Freshwater Fish from Wicheon Stream in Gunwi-gun, Gyeongsangbuk-do, Korea

PubMed Central

Sohn, Woon-Mok; Na, Byoung-Kuk; Cho, Shin-Hyeong; Ju, Jung-Won; Son, Dong-Chul

2018-01-01

The infection status of Clonorchis sinensis metacercariae (CsMc) was examined in freshwater fish from a highly prevalent site, Wicheon (a branch of Nakdong-gang), which is located in Gunwi-gun, Gyeongsangbuk-do, the Republic of Korea. Total 1,162 fish in 32 species were examined by the artificial digestion method through 6 years. CsMc were detected in 720 (67.5%) out of 1,067 fish (26 spp.) and their density was 610 per fish infected. In the susceptible gobioninid fish group, i.e., Pungtungia herzi, Squalidus gracilis majimae, Squalidus japonicus coreanus, Sarcocheilichthys variegatus wakiyae and Pseudorasbora parva, all of 323 fish were infected with an average of 1,310 CsMc. Total 23 (95.8%) gobioninid fish, i.e., Pseudogobio esocinus, Abbottina springeri, Hemibarbus longirostris, Microphysogobio koreensis, and Microphysogobio jeoni, were infected with 127 CsMc in average. In the acheilognathinid fish (bitterlings) group, the prevalence was 77.0%, and the density was 50 CsMc per fish infected. In the rasborinid fish (chubs) group, i.e., Zacco platypus, Zacco temminckii, Zacco koreanus, and Opsariichthys uncirostris amurensis, 147 (36.5%) out of 403 fish examined were infected with 15 CsMc in average. The susceptibility indices of CsMc were 412 in the overall positive fish group, 1,310 in the gobioninid group-1, 122 in the gobioninid group-2, 38.5 in the acheilognathinid group, and 5.5 in the rasborinid fish group. Conclusively, it was confirmed that CsMc are highly prevalent in fish from Wicheon, and their infection tendency varied according to the subfamily groups in Cyprinidae fish hosts. PMID:29529849

Diphyllidean cestodes of the Gulf of California, México with descriptions of two new species of Echinobothrium (Cestoda: Diphyllidea).

PubMed

Tyler, G A

2001-02-01

As part of a survey of parasites of elasmobranchs in the Gulf of California, a second and final report of the diphyllidean cestodes resulting from the survey is presented. Of 43 species of elasmobranchs examined for parasites, 7 (Rhinobatos productus, Rhinobatos leucorhynchus, Myliobatis californicus, Myliobatis longirostris, Urobatis halleri, Urobatis maculatus, and Rhinoptera steindachneri) were found to host diphyllidean cestodes, all belonging to Echinobothrium. No species of either of the other 2 diphyllidean genera, Dirrachybothridium or Macrobothridium, were discovered. A greater diversity of diphyllideans was found in 1996 than in 1993. Two new species, Echinobothrium hoffmanorum n. sp. and Echinobothrium rayallemangi n. sp. are described from the spiral intestines of U. maculatus and R. leucorhynchus, respectively. Echinobothrium hoffmanorum is unique in its possession of the following combination of characters: 19-21 apical hooks in each dorsoventral group, 12-22 lateral hooklets in each group, 10-17 cephalic peduncle spines per column, 4-8 testes, 4-10 segments and eggs with a single filament. Echinobothrium rayallemangi is unique in its possession of the following combination of characters: 23 apical hooks in each dorsoventral group, 20-23 lateral hooklets in each group, 2-5 cephalic peduncle spines per column, 4-6 testes, and 4-6 segments. These 2 new species, together with Echinobothrium mexicanum and Echinobothrium fautleyae, brings the total number of diphyllideans known from the Gulf of California to 4. The survey of diphyllidean cestodes of the Gulf of California has resulted in a new host record for Echinobothrium for each of the host species mentioned above, with Rhinobatos and Urobatis representing new host genera and Urolophidae a new host family for Echinobothrium.

Prey selectivity affects reproductive success of a corallivorous reef fish.

PubMed

Brooker, Rohan M; Jones, Geoffrey P; Munday, Philip L

2013-06-01

Most animals consume a narrower range of food resources than is potentially available in the environment, but the underlying basis for these preferences is often poorly understood. Foraging theory predicts that prey selection should represent a trade-off between prey preferences based on nutritional value and prey availability. That is, species should consume preferred prey when available, but select less preferred prey when preferred prey is rare. We employed both field observation and laboratory experiments to examine the relationship between prey selection and preferences in the obligate coral-feeding filefish, Oxymonacanthus longirostris. To determine the drivers of prey selection, we experimentally established prey preferences in choice arenas and tested the consequences of prey preferences for key fitness-related parameters. Field studies showed that individuals fed almost exclusively on live corals from the genus Acropora. While diet was dominated by the most abundant species, Acropora nobilis, fish appeared to preferentially select rarer acroporids, such as A. millepora and A. hyacinthus. Prey choice experiments confirmed strong preferences for these corals, suggesting that field consumption is constrained by availability. In a longer-term feeding experiment, reproductive pairs fed on non-preferred corals exhibited dramatic reductions to body weight, and in hepatic and gonad condition, compared with those fed preferred corals. The majority of pairs fed preferred corals spawned frequently, while no spawning was observed for any pairs fed a non-preferred species of coral. These experiments suggest that fish distinguish between available corals based on their intrinsic value as prey, that reproductive success is dependent on the presence of particular coral species, and that differential loss of preferred corals could have serious consequences for the population success of these dietary specialists.

Soras in tidal marsh: Banding and telemetry studies on the Patuxent River, Maryland

USGS Publications Warehouse

Haramis, G.M.; Kearns, G.D.; Erwin, R. Michael; Watts, Bryan D.; Haramis, G.Michael; Perry, Matthew C.; Hobson, Keith A.

2007-01-01

From 1993 to 1999, we conducted banding and telemetry studies of fall migrant Soras (Porzana carolina) in the historic rail hunting and exceptional stopover habitat of the Wild Rice (Zizania aquatica) marshes of the tidal Patuxent River. Drift traps equipped with audio lures produced 3,897 Sora and 417 Virginia Rail (Rallus limicola) captures during the seven-year study. Sora captures were characterized by a high proportion (70% to 90%) of young-of-the year and a paucity of between-year recaptures (N = 12). Radio-telemetry studies depicted Soras as long distance migrants with high stopover survivaI and a critical dependence on tidal freshwater marshes for migratory fattening. Here, the high productivity of Wild Rice, Smartweeds (Polygonum spp.) and other seed-bearing annual plants seem intrinsically linked to Sora migratory fitness. A stopover period of >40 days and mean mass gain of +0.6g/d suggests Soras are accumulating large fat reserves for long-distance flight. Radio tracking confirmed Soras as strong flyers with a demonstrated overnight (ten h) flight range of 700-900+ km. Given the potential size of fat reserves and the ability to use tail winds, it is conceivable for Soras to make nonstop flights from the Patuxent River to Florida, the Bahamas, or even the Caribbean. Once a widely hunted species, a single sport-hunting recovery from our 3,900 bandings attests to the decline in popularity of the Sora as a game bird in the Atlantic Flyway. We suggest the few between-year recaptures observed in our bandings results from three possible factors: 1) the strong influence of wind drift on migration, 2) different migration chronology or flight path of AHY versus HY birds, and/or 3) high mortality of especially HY birds during Atlantic coastal and Gulf crossings. The critical dependence of Soras and other seed-dependent, fall-migrant waterbirds on highly productive yet limited tidal freshwater marsh habitats make conservation of such areas a priority mission within

Distribution and habitat use of king rails in the Illinois and Upper Mississippi River valleys

USGS Publications Warehouse

Darrah, Abigail J.; Krementz, David G.

2009-01-01

The migratory population of the king rail (Rallus elegans) has declined dramatically during the past 40 years, emphasizing the need to identify habitat requirements of this species to help guide conservation efforts. To assess distribution and habitat use of king rails along the Illinois and Upper Mississippi valleys, USA, we conducted repeated call-broadcast surveys at 83 locations in 2006 and 114 locations in 2007 distributed among 21 study sites. We detected king rails at 12 survey locations in 2006 and 14 locations in 2007, illustrating the limited distribution of king rails in this region. We found king rails concentrated at Clarence Cannon National Wildlife Refuge, an adjacent private Wetlands Reserve program site, and B. K. Leach Conservation Area, which were located in the Mississippi River floodplain in northeast Missouri. Using Program PRESENCE, we estimated detection probabilities and built models to identify habitat covariates that were important in king rail site occupancy. Habitat covariates included percentage of cover by tall (> 1 m) and short (<= 1 m) emergent vegetation, percentage of cover of woody vegetation, and interspersion of water and vegetation ( 2007 only) within 50 m of the survey location. Detection probability was 0.43 (SE = 0.12) in 2006 and 0.35 (SE = 0.03) in 2007 and was influenced by observer identity and percentage of cover by tall herbaceous vegetation. Site occupancy was 0.11 (SE = 0.04) in 2006 and 0.14 (SE = 0.04) in 2007 and was negatively influenced most by percentage of cover by woody vegetation. In addition, we found that interspersion of vegetation and water was positively related to occupancy in 2007. Thus, nesting king rails used wetlands that were characterized by high water-vegetation interspersion and little or no cover by woody vegetation. Our results suggest that biologists can improve king rail habitat by implementing management techniques that reduce woody cover and increase vegetation-water interspersion in

Evaluating autonomous acoustic surveying techniques for rails in tidal marshes

USGS Publications Warehouse

Stiffler, Lydia L.; Anderson, James T.; Katzner, Todd

2018-01-01

There is a growing interest toward the use of autonomous recording units (ARUs) for acoustic surveying of secretive marsh bird populations. However, there is little information on how ARUs compare to human surveyors or how best to use ARU data that can be collected continuously throughout the day. We used ARUs to conduct 2 acoustic surveys for king (Rallus elegans) and clapper rails (R. crepitans) within a tidal marsh complex along the Pamunkey River, Virginia, USA, during May–July 2015. To determine the effectiveness of an ARU in replacing human personnel, we compared results of callback point‐count surveys with concurrent acoustic recordings and calculated estimates of detection probability for both rail species combined. The success of ARUs at detecting rails that human observers recorded decreased with distance (P ≤ 0.001), such that at <25 m, 90.3% of human‐recorded rails also were detected by the ARU, but at >75 m, only 34.0% of human‐detected rails were detected by the ARU. To determine a subsampling scheme for continuous ARU data that allows for effective surveying of presence and call rates of rails, we used ARUs to conduct 15 continuous 48‐hr passive surveys, generating 720 hr of recordings. We established 5 subsampling periods of 5, 10, 15, 30, and 45 min to evaluate ARU‐based presence and vocalization detections of rails compared with each of the full 60‐min sampling of ARU‐based detection of rails. All subsampling periods resulted in different (P ≤ 0.001) detection rates and unstandardized vocalization rates compared with the hourly sampling period. However, standardized vocalization counts from the 30‐min subsampling period were not different from vocalization counts of the full hourly sampling period. When surveying rail species in estuarine environments, species‐, habitat‐, and ARU‐specific limitations to ARU sampling should be considered when making inferences about abundances and distributions from ARU

Rediscovery of Atelopus subornatus Werner, 1899 (Anura: Bufonidae), with a redescription of the tadpole.

PubMed

Enciso-Calle, Maria Paula; Viuche-Lozano, Andres; Anganoy-Criollo, Marvin; Bernal, Manuel Hernando

2017-11-06

The Neotropical toads of the genus Atelopus are among the most imperiled of all amphibians (La Marca et al. 2005; Gonzalez-Maya et al. 2013; McCaffery et al. 2015). Nowadays, at least 90% of the 93 listed species are threatened and more than 77% are Critically Endangered (McCaffery et al. 2015; IUCN 2016). Colombia has 44 described species of Atelopus (Frost 2017), two of these are categorized as extinct (EX) by the IUCN (2016): A. ignescens and A. longirostris, although they were recently re-discovered in Ecuador (Tapia et al. 2017), 34 as critical endangered (CR), four as endangered (EN), two as vulnerable (VU), one species has data deficient (DD) and another one has not been evaluated. Atelopus subornatus Werner, 1899, is an endemic Colombian harlequin toad described from 2300 to 2800 m.a.s.l in the municipalities of Sibaté (Alto de Sibaté and Agua Bonita) and Fusagasuga (above Fusagasuga and Tierra Negra), in Cundinamarca (Fig. 1A), on the western flank from Cordillera Oriental of Colombia (Werner 1899; Lynch 1986; Lötters 1989, 1992). The last record of this species was in 1993 (Lötters 2005), and it currently is listed as Critically Endangered by the IUCN (2016). Herein, we report the rediscovery of A. subornatus at a new locality from Tolima, Colombia (Fig. 1A), and redescribe its tadpole. The determination of the species was based on comparisons with material deposited in the amphibian collection of the Instituto de Ciencias Naturales, Universidad Nacional de Colombia (ICN-UNAL) for all species of Atelopus reported from the same general area in Cundinamarca and relatively similar to A. subornatus. The specimens are housed in the Herpetological collection of the Tolima University (CZUT-A) and amphibian collection of ICN-UNAL.

Diversity and Distribution Patterns of Cetaceans in the Subtropical Southwestern Atlantic Outer Continental Shelf and Slope.

PubMed

Di Tullio, Juliana Couto; Gandra, Tiago B R; Zerbini, Alexandre N; Secchi, Eduardo R

2016-01-01

Temporal and spatial patterns of cetacean diversity and distribution were investigated through eight ship-based surveys carried out during spring and autumn between 2009 and 2014 on the outer continental shelf (~150m) and slope (1500m) off southeastern and southern Brazil (~23°S to ~34°S). The survey area was divided into southeast and south areas according to their oceanographic characteristics. Twenty-one species were observed in 503 sightings. The overall number of species was similar between the two areas, though it was higher in the spring in the south area. Five species were dominant and diversity varied more seasonally than spatially. ANOVA and kernel analyses showed that overall cetacean densities were higher in spring compared to autumn. Physeter macrocephalus, the most frequent species, concentrated throughout the south area at depths over 1000m in both seasons. Despite the overlapped occurrence at a broader scale, small delphinids presented latitudinal and in-offshore gradients as well as seasonal variation in distribution patterns, which could indicate habitat partitioning between some species. Delphinus delphis was only recorded in the south and its density decreased in areas where the presence of Stenella frontalis increased, mainly beyond the 250m isobath. Densities of S. longirostris and S. attenuata increased in lower latitudes and beyond the shelf break. The large delphinids Tursiops truncatus and Globicephala melas formed mixed groups in many occasions and were observed along the study area around depths of 500m. Grampus griseus was twice as frequent in the south area and densities increased in waters deeper than 600m. As expected, densities of both small and large migratory whales were higher during spring, over the continental slope, in the southeast area. The results presented here provided strong evidence on the importance of the outer continental shelf and slope to a diverse community of cetaceans occurring in the subtropical Southwestern

Reexamination of the Species Assignment of Diacavolinia Pteropods Using DNA Barcoding

PubMed Central

Maas, Amy E.; Blanco-Bercial, Leocadio; Lawson, Gareth L.

2013-01-01

Thecosome pteropods (Mollusca, Gastropoda) are an ecologically important, diverse, and ubiquitous group of holoplanktonic animals that are the focus of intense research interest due to their external aragonite shell and vulnerability to ocean acidification. Characterizing the response of these animals to low pH and other environmental stressors has been hampered by continued uncertainty in their taxonomic identification. An example of this confusion in species assignment is found in the genus Diacavolinia. All members of this genus were originally indentified as a single species, Cavolinia longirostris, but over the past fifty years the taxonomy has been revisited multiple times; currently the genus comprises 22 different species. This study examines five species of Diacavolinia, including four sampled in the Northeast Atlantic (78 individuals) and one from the Eastern tropical North Pacific (15 individuals). Diacavolina were identified to species based on morphological characteristics according to the current taxonomy, photographed, and then used to determine the sequence of the “DNA barcoding” region of the cytochrome c oxidase subunit I (COI). Specimens from the Atlantic, despite distinct differences in shell morphology, showed polyphyly and a genetic divergence of <3% (K2P distance) whereas the Pacific and Atlantic samples were more distant (∼19%). Comparisons of Diacavolinia spp. with other Cavolinia spp. reveal larger distances (∼24%). These results indicate that specimens from the Atlantic comprise a single monophyletic species and suggest possible species-level divergence between Atlantic and Pacific populations. The findings support the maintenance of Diacavolinia as a separate genus, yet emphasize the inadequacy of our current taxonomic understanding of pteropods. They highlight the need for accurate species identifications to support estimates of biodiversity, range extent and natural exposure of these planktonic calcifiers to environmental

Diversity and Community Composition of Vertebrates in Desert River Habitats

PubMed Central

Free, C. L.; Baxter, G. S.; Dickman, C. R.; Lisle, A.; Leung, L. K.-P.

2015-01-01

Animal species are seldom distributed evenly at either local or larger spatial scales, and instead tend to aggregate in sites that meet their resource requirements and maximise fitness. This tendency is likely to be especially marked in arid regions where species could be expected to concentrate at resource-rich oases. In this study, we first test the hypothesis that productive riparian sites in arid Australia support higher vertebrate diversity than other desert habitats, and then elucidate the habitats selected by different species. We addressed the first aim by examining the diversity and composition of vertebrate assemblages inhabiting the Field River and adjacent sand dunes in the Simpson Desert, western Queensland, over a period of two and a half years. The second aim was addressed by examining species composition in riparian and sand dune habitats in dry and wet years. Vertebrate species richness was estimated to be highest (54 species) in the riverine habitats and lowest on the surrounding dune habitats (45 species). The riverine habitats had different species pools compared to the dune habitats. Several species, including the agamid Gowidon longirostris and tree frog Litoria rubella, inhabited the riverine habitats exclusively, while others such as the skinks Ctenotus ariadnae and C. dux were captured only in the dune habitats. The results suggest that, on a local scale, diversity is higher along riparian corridors and that riparian woodland is important for tree-dependent species. Further, the distribution of some species, such as Mus musculus, may be governed by environmental variables (e.g. soil moisture) associated with riparian corridors that are not available in the surrounding desert environment. We conclude that inland river systems may be often of high conservation value, and that management should be initiated where possible to alleviate threats to their continued functioning. PMID:26637127

The hydrodynamics of dolphin drafting

PubMed Central

Weihs, Daniel

2004-01-01

Background Drafting in cetaceans is defined as the transfer of forces between individuals without actual physical contact between them. This behavior has long been surmised to explain how young dolphin calves keep up with their rapidly moving mothers. It has recently been observed that a significant number of calves become permanently separated from their mothers during chases by tuna vessels. A study of the hydrodynamics of drafting, initiated in the hope of understanding the mechanisms causing the separation of mothers and calves during fishing-related activities, is reported here. Results Quantitative results are shown for the forces and moments around a pair of unequally sized dolphin-like slender bodies. These include two major effects. First, the so-called Bernoulli suction, which stems from the fact that the local pressure drops in areas of high speed, results in an attractive force between mother and calf. Second is the displacement effect, in which the motion of the mother causes the water in front to move forwards and radially outwards, and water behind the body to move forwards to replace the animal's mass. Thus, the calf can gain a 'free ride' in the forward-moving areas. Utilizing these effects, the neonate can gain up to 90% of the thrust needed to move alongside the mother at speeds of up to 2.4 m/sec. A comparison with observations of eastern spinner dolphins (Stenella longirostris) is presented, showing savings of up to 60% in the thrust that calves require if they are to keep up with their mothers. Conclusions A theoretical analysis, backed by observations of free-swimming dolphin schools, indicates that hydrodynamic interactions with mothers play an important role in enabling dolphin calves to keep up with rapidly moving adult school members. PMID:15132740

Isthminia panamensis, a new fossil inioid (Mammalia, Cetacea) from the Chagres Formation of Panama and the evolution of ‘river dolphins’ in the Americas

PubMed Central

Vélez-Juarbe, Jorge; Gutstein, Carolina S.; Little, Holly; Vigil, Dioselina; O’Dea, Aaron

2015-01-01

In contrast to dominant mode of ecological transition in the evolution of marine mammals, different lineages of toothed whales (Odontoceti) have repeatedly invaded freshwater ecosystems during the Cenozoic era. The so-called ‘river dolphins’ are now recognized as independent lineages that converged on similar morphological specializations (e.g., longirostry). In South America, the two endemic ‘river dolphin’ lineages form a clade (Inioidea), with closely related fossil inioids from marine rock units in the South Pacific and North Atlantic oceans. Here we describe a new genus and species of fossil inioid, Isthminia panamensis, gen. et sp. nov. from the late Miocene of Panama. The type and only known specimen consists of a partial skull, mandibles, isolated teeth, a right scapula, and carpal elements recovered from the Piña Facies of the Chagres Formation, along the Caribbean coast of Panama. Sedimentological and associated fauna from the Piña Facies point to fully marine conditions with high planktonic productivity about 6.1–5.8 million years ago (Messinian), pre-dating the final closure of the Isthmus of Panama. Along with ecomorphological data, we propose that Isthminia was primarily a marine inhabitant, similar to modern oceanic delphinoids. Phylogenetic analysis of fossil and living inioids, including new codings for Ischyrorhynchus, an enigmatic taxon from the late Miocene of Argentina, places Isthminia as the sister taxon to Inia, in a broader clade that includes Ischyrorhynchus and Meherrinia, a North American fossil inioid. This phylogenetic hypothesis complicates the possible scenarios for the freshwater invasion of the Amazon River system by stem relatives of Inia, but it remains consistent with a broader marine ancestry for Inioidea. Based on the fossil record of this group, along with Isthminia, we propose that a marine ancestor of Inia invaded Amazonia during late Miocene eustatic sea-level highs. PMID:26355720

Validation of Blubber Progesterone Concentrations for Pregnancy Determination in Three Dolphin Species and a Porpoise

PubMed Central

Trego, Marisa L.; Kellar, Nicholas M.; Danil, Kerri

2013-01-01

Recent studies have validated the use of biopsies as a minimally invasive way to identify pregnant females in several species of wild cetaceans: Balaenaptera acutorostrata , Delphinus delphis , Lissodelphis borealis , and Lagenorhynchus obliquidens . These studies found that progesterone (P4) concentrations quantified from blubber attached to biopsy samples is diagnostic of pregnancy. Here we examine a broader group of cetacean species in efforts to investigate how progesterone levels vary between species with respect to pregnancy status. We compared P4 concentrations in blubber collected from fishery bycatch and beach-stranded specimens for 40 females of known reproductive condition from Delphinus capensis (n = 18), Stenella attenuata (n = 8), S . longirostris (n = 6), and Phocoenoides dalli (n = 8). The P4 concentrations were different (t = -7.1, p = 1.79E-08) between pregnant and non-pregnant animals in all species, with the mean blubber P4 concentration for pregnant animals 164 times higher than that of non-pregnant animals. There was no overlap in concentration levels between sexually immature or non-pregnant sexually mature animals and pregnant animals. No significant differences (F = 0.354, p = 0.559) were found between mature non-pregnant and immature D . capensis and P dalli , suggesting P4 level is not indicative of maturity state in female delphinoids. P4 concentrations in relation to reproductive state were remarkably similar across species. All samples were analyzed with two different enzyme immunoassay kits to gauge assay sensitivity to measure progesterone in small samples, such as biopsies. With the technique now validated for these cetacean species, blubber P4 is a reliable diagnostic of pregnancies across multiple species, and thus expands the utility of this method to study reproduction in free-ranging cetaceans using biopsies. PMID:23936083

Natural exposure of bats in Grenada to rabies virus

PubMed Central

Zieger, Ulrike; Cheetham, Sonia; Santana, Sharlene E.; Leiser-Miller, Leith; Matthew-Belmar, Vanessa; Goharriz, Hooman; Fooks, Anthony R.

2017-01-01

ABSTRACT Introduction: Grenada is a rabies endemic country, where terrestrial rabies is maintained in the small Indian mongoose (Herpestes auropunctatus). The role of bats in the epidemiology of rabies in Grenada is unknown. A 1974 report described one rabies virus positive Jamaican fruit bat (Artibeus jamaicensis), and a high seroprevalence in this species. In the current study, the natural exposure to rabies virus in Grenadian bats was re-evaluated. It is postulated that bats serve as a natural rabies reservoir, probably circulating a bat-specific rabies virus variant. Material and methods: Bats were trapped in 2015 in all six parishes of Grenada using mist- and hand nets. For the detection of rabies virus in brain tissue, the direct fluorescent antibody test (dFAT) and the reverse transcription polymerase chain reaction (RT-PCR) were used. Serum neutralizing antibodies were determined using the fluorescent antibody virus neutralization test (FAVN). Results and discussion: Brain tissue and sera from 111 insectivorous and frugivorous bats belonging to four species were tested (52 Artibeus jamaicensis, two Artibeus lituratus, 33 Glossophaga longirostris, 24 Molossus molossus). Rabies virus antigen and genomic RNA were not detected in brain tissues. Rabies virus neutralizing antibodies were detected in the sera of eight A. jamaicensis in four of the six parishes. Bats in Grenada continue to show natural exposure to rabies virus. As rabies virus was not isolated in this study, serology alone is not sufficient to determine the strain of rabies virus circulating in A. jamaicensis bats in Grenada. Conclusion: Artibeus jamaicensis appears to play a role as a reservoir bat species, which is of public health concern in Grenada. Dispersion of bats to neighboring islands is possible and serological bat surveys should be initiated in these neighboring states, especially in those areas that are free of rabies in terrestrial mammals. PMID:28804595

Culicoides Species Communities Associated with Wild Ruminant Ecosystems in Spain: Tracking the Way to Determine Potential Bridge Vectors for Arboviruses.

PubMed

Talavera, Sandra; Muñoz-Muñoz, Francesc; Durán, Mauricio; Verdún, Marta; Soler-Membrives, Anna; Oleaga, Álvaro; Arenas, Antonio; Ruiz-Fons, Francisco; Estrada, Rosa; Pagès, Nitu

2015-01-01

The genus Culicoides Latreille 1809 is a well-known vector for protozoa, filarial worms and, above all, numerous viruses. The Bluetongue virus (BTV) and the recently emerged Schmallenberg virus (SBV) are responsible for important infectious, non-contagious, insect-borne viral diseases found in domestic ruminants and transmitted by Culicoides spp. Both of these diseases have been detected in wild ruminants, but their role as reservoirs during the vector-free season still remains relatively unknown. In fact, we tend to ignore the possibility of wild ruminants acting as a source of disease (BTV, SBV) and permitting its reintroduction to domestic ruminants during the following vector season. In this context, a knowledge of the composition of the Culicoides species communities that inhabit areas where there are wild ruminants is of major importance as the presence of a vector species is a prerequisite for disease transmission. In this study, samplings were conducted in areas inhabited by different wild ruminant species; samples were taken in both 2009 and 2010, on a monthly basis, during the peak season for midge activity (in summer and autumn). A total of 102,693 specimens of 40 different species of the genus Culicoides were trapped; these included major BTV and SBV vector species. The most abundant vector species were C. imicola and species of the Obsoletus group, which represented 15% and 11% of total numbers of specimens, respectively. At the local scale, the presence of major BTV and SBV vector species in areas with wild ruminants coincided with that of the nearest sentinel farms included in the Spanish Bluetongue Entomological Surveillance Programme, although their relative abundance varied. The data suggest that such species do not exhibit strong host specificity towards either domestic or wild ruminants and that they could consequently play a prominent role as bridge vectors for different pathogens between both types of ruminants. This finding would support the

A comparison of commercial light-emitting diode baited suction traps for surveillance of Culicoides in northern Europe.

PubMed

Hope, Andrew; Gubbins, Simon; Sanders, Christopher; Denison, Eric; Barber, James; Stubbins, Francesca; Baylis, Matthew; Carpenter, Simon

2015-04-22

The response of Culicoides biting midges (Diptera: Ceratopogonidae) to artificial light sources has led to the use of light-suction traps in surveillance programmes. Recent integration of light emitting diodes (LED) in traps improves flexibility in trapping through reduced power requirements and also allows the wavelength of light used for trapping to be customized. This study investigates the responses of Culicoides to LED light-suction traps emitting different wavelengths of light to make recommendations for use in surveillance. The abundance and diversity of Culicoides collected using commercially available traps fitted with Light Emitting Diode (LED) platforms emitting ultraviolet (UV) (390 nm wavelength), blue (430 nm), green (570 nm), yellow (590 nm), red (660 nm) or white light (425 nm - 750 nm with peaks at 450 nm and 580 nm) were compared. A Centre for Disease Control (CDC) UV light-suction trap was also included within the experimental design which was fitted with a 4 watt UV tube (320-420 nm). Generalised linear models with negative binomial error structure and log-link function were used to compare trap abundance according to LED colour, meteorological conditions and seasonality. The experiment was conducted over 49 nights with 42,766 Culicoides caught in 329 collections. Culicoides obsoletus Meigen and Culicoides scoticus Downes and Kettle responded indiscriminately to all wavelengths of LED used with the exception of red which was significantly less attractive. In contrast, Culicoides dewulfi Goetghebuer and Culicoides pulicaris Linnaeus were found in significantly greater numbers in the green LED trap than in the UV LED trap. The LED traps collected significantly fewer Culicoides than the standard CDC UV light-suction trap. Catches of Culicoides were reduced in LED traps when compared to the standard CDC UV trap, however, their reduced power requirement and small size fulfils a requirement for trapping in logistically challenging areas or where many

'Candidatus Phytoplasma solani', a novel taxon associated with stolbur- and bois noir-related diseases of plants.

PubMed

Quaglino, Fabio; Zhao, Yan; Casati, Paola; Bulgari, Daniela; Bianco, Piero Attilio; Wei, Wei; Davis, Robert Edward

2013-08-01

Phytoplasmas classified in group 16SrXII infect a wide range of plants and are transmitted by polyphagous planthoppers of the family Cixiidae. Based on 16S rRNA gene sequence identity and biological properties, group 16SrXII encompasses several species, including 'Candidatus Phytoplasma australiense', 'Candidatus Phytoplasma japonicum' and 'Candidatus Phytoplasma fragariae'. Other group 16SrXII phytoplasma strains are associated with stolbur disease in wild and cultivated herbaceous and woody plants and with bois noir disease in grapevines (Vitis vinifera L.). Such latter strains have been informally proposed to represent a separate species, 'Candidatus Phytoplasma solani', but a formal description of this taxon has not previously been published. In the present work, stolbur disease strain STOL11 (STOL) was distinguished from reference strains of previously described species of the 'Candidatus Phytoplasma' genus based on 16S rRNA gene sequence similarity and a unique signature sequence in the 16S rRNA gene. Other stolbur- and bois noir-associated ('Ca. Phytoplasma solani') strains shared >99 % 16S rRNA gene sequence similarity with strain STOL11 and contained the signature sequence. 'Ca. Phytoplasma solani' is the only phytoplasma known to be transmitted by Hyalesthes obsoletus. Insect vectorship and molecular characteristics are consistent with the concept that diverse 'Ca. Phytoplasma solani' strains share common properties and represent an ecologically distinct gene pool. Phylogenetic analyses of 16S rRNA, tuf, secY and rplV-rpsC gene sequences supported this view and yielded congruent trees in which 'Ca. Phytoplasma solani' strains formed, within the group 16SrXII clade, a monophyletic subclade that was most closely related to, but distinct from, that of 'Ca. Phytoplasma australiense'-related strains. Based on distinct molecular and biological properties, stolbur- and bois noir-associated strains are proposed to represent a novel species level taxon, 'Ca

Marine mammal strandings in the New Caledonia region, Southwest Pacific.

PubMed

Borsa, Philippe

2006-04-01

Four hundred twenty three marine mammals, in 72 stranding events, were recorded between 1877 and 2005 in New Caledonia, the Loyalty Islands, and Vanuatu in the southwest Pacific. Sixteen species were represented in this count, including: minke whale, Balaenoptera acutorostrata (1 single stranding), sei whale, B. borealis (1 single stranding), blue whale, B. musculus (1 single stranding), humpback whale, Megaptera novaeangliae (2 single strandings), giant sperm whale, Physeter macrocephalus (18 single strandings, 2 pair strandings), pygmy sperm whale, Kogia breviceps (5 single strandings), dwarf sperm whale, K. sima (2 single strandings, 1 triple stranding), Blainville's beaked whale, Mesoplodon densirostris (2 single strandings), short-finned pilot whale, Globicephala macrorhynchus (4 strandings, 56 individuals), melon-headed whale, Peponocephala electra (1 single stranding and 2 mass strandings totalling 231 individuals), common dolphin, Delphinus delphis (1 single stranding), spinner dolphin, Stenella longirostris (1 pair stranding and 2 mass strandings of groups of approximately 30 individuals each), Indian Ocean bottlenose dolphin, Tursiops aduncus (2 single strandings), dugong, Dugong dugon (14 single strandings), and New Zealand fur seal, Arctocephalus forsteri (3 single strandings). A stranded rorqual identified as an Antarctic minke whale (B. bonaerensis), with coloration patterns that did not match known descriptions, was also reported. Sei whale was recorded for the first time in the tropical Southwest Pacific region and Antarctic minke whale, melon-headed whale, and Indian Ocean bottlenose dolphin were recorded for the first time in New Caledonia. Strandings of sperm whales were most frequent in the spring, but also occurred in autumn months, suggesting a seasonal pattern of occurrence possibly related to seasonal migration. One stranded humpback whale bore the scars of a killer whale's attack and one dugong was injured by a shark. Scars left by

The seascape of demersal fish nursery areas in the North Mediterranean Sea, a first step towards the implementation of spatial planning for trawl fisheries.

PubMed

Colloca, Francesco; Garofalo, Germana; Bitetto, Isabella; Facchini, Maria Teresa; Grati, Fabio; Martiradonna, Angela; Mastrantonio, Gianluca; Nikolioudakis, Nikolaos; Ordinas, Francesc; Scarcella, Giuseppe; Tserpes, George; Tugores, M Pilar; Valavanis, Vasilis; Carlucci, Roberto; Fiorentino, Fabio; Follesa, Maria C; Iglesias, Magdalena; Knittweis, Leyla; Lefkaditou, Eugenia; Lembo, Giuseppe; Manfredi, Chiara; Massutí, Enric; Pace, Marie Louise; Papadopoulou, Nadia; Sartor, Paolo; Smith, Christopher J; Spedicato, Maria Teresa

2015-01-01

The identification of nursery grounds and other essential fish habitats of exploited stocks is a key requirement for the development of spatial conservation planning aimed at reducing the adverse impact of fishing on the exploited populations and ecosystems. The reduction in juvenile mortality is particularly relevant in the Mediterranean and is considered as one of the main prerequisites for the future sustainability of trawl fisheries. The distribution of nursery areas of 11 important commercial species of demersal fish and shellfish was analysed in the European Union Mediterranean waters using time series of bottom trawl survey data with the aim of identifying the most persistent recruitment areas. A high interspecific spatial overlap between nursery areas was mainly found along the shelf break of many different sectors of the Northern Mediterranean indicating a high potential for the implementation of conservation measures. Overlap of the nursery grounds with existing spatial fisheries management measures and trawl fisheries restricted areas was also investigated. Spatial analyses revealed considerable variation depending on species and associated habitat/depth preferences with increased protection seen in coastal nurseries and minimal protection seen for deeper nurseries (e.g. Parapenaeus longirostris 6%). This is partly attributed to existing environmental policy instruments (e.g. Habitats Directive and Mediterranean Regulation EC 1967/2006) aiming at minimising impacts on coastal priority habitats such as seagrass, coralligenous and maerl beds. The new knowledge on the distribution and persistence of demersal nurseries provided in this study can support the application of spatial conservation measures, such as the designation of no-take Marine Protected Areas in EU Mediterranean waters and their inclusion in a conservation network. The establishment of no-take zones will be consistent with the objectives of the Common Fisheries Policy applying the ecosystem

The Seascape of Demersal Fish Nursery Areas in the North Mediterranean Sea, a First Step Towards the Implementation of Spatial Planning for Trawl Fisheries

PubMed Central

Colloca, Francesco; Garofalo, Germana; Bitetto, Isabella; Facchini, Maria Teresa; Grati, Fabio; Martiradonna, Angela; Mastrantonio, Gianluca; Nikolioudakis, Nikolaos; Ordinas, Francesc; Scarcella, Giuseppe; Tserpes, George; Tugores, M. Pilar; Valavanis, Vasilis; Carlucci, Roberto; Fiorentino, Fabio; Follesa, Maria C.; Iglesias, Magdalena; Knittweis, Leyla; Lefkaditou, Eugenia; Lembo, Giuseppe; Manfredi, Chiara; Massutí, Enric; Pace, Marie Louise; Papadopoulou, Nadia; Sartor, Paolo; Smith, Christopher J.; Spedicato, Maria Teresa

2015-01-01

The identification of nursery grounds and other essential fish habitats of exploited stocks is a key requirement for the development of spatial conservation planning aimed at reducing the adverse impact of fishing on the exploited populations and ecosystems. The reduction in juvenile mortality is particularly relevant in the Mediterranean and is considered as one of the main prerequisites for the future sustainability of trawl fisheries. The distribution of nursery areas of 11 important commercial species of demersal fish and shellfish was analysed in the European Union Mediterranean waters using time series of bottom trawl survey data with the aim of identifying the most persistent recruitment areas. A high interspecific spatial overlap between nursery areas was mainly found along the shelf break of many different sectors of the Northern Mediterranean indicating a high potential for the implementation of conservation measures. Overlap of the nursery grounds with existing spatial fisheries management measures and trawl fisheries restricted areas was also investigated. Spatial analyses revealed considerable variation depending on species and associated habitat/depth preferences with increased protection seen in coastal nurseries and minimal protection seen for deeper nurseries (e.g. Parapenaeus longirostris 6%). This is partly attributed to existing environmental policy instruments (e.g. Habitats Directive and Mediterranean Regulation EC 1967/2006) aiming at minimising impacts on coastal priority habitats such as seagrass, coralligenous and maerl beds. The new knowledge on the distribution and persistence of demersal nurseries provided in this study can support the application of spatial conservation measures, such as the designation of no-take Marine Protected Areas in EU Mediterranean waters and their inclusion in a conservation network. The establishment of no-take zones will be consistent with the objectives of the Common Fisheries Policy applying the ecosystem

Diversity and Distribution Patterns of Cetaceans in the Subtropical Southwestern Atlantic Outer Continental Shelf and Slope

PubMed Central

Di Tullio, Juliana Couto; Gandra, Tiago B. R.; Zerbini, Alexandre N.; Secchi, Eduardo R.

2016-01-01

Temporal and spatial patterns of cetacean diversity and distribution were investigated through eight ship-based surveys carried out during spring and autumn between 2009 and 2014 on the outer continental shelf (~150m) and slope (1500m) off southeastern and southern Brazil (~23°S to ~34°S). The survey area was divided into southeast and south areas according to their oceanographic characteristics. Twenty-one species were observed in 503 sightings. The overall number of species was similar between the two areas, though it was higher in the spring in the south area. Five species were dominant and diversity varied more seasonally than spatially. ANOVA and kernel analyses showed that overall cetacean densities were higher in spring compared to autumn. Physeter macrocephalus, the most frequent species, concentrated throughout the south area at depths over 1000m in both seasons. Despite the overlapped occurrence at a broader scale, small delphinids presented latitudinal and in-offshore gradients as well as seasonal variation in distribution patterns, which could indicate habitat partitioning between some species. Delphinus delphis was only recorded in the south and its density decreased in areas where the presence of Stenella frontalis increased, mainly beyond the 250m isobath. Densities of S. longirostris and S. attenuata increased in lower latitudes and beyond the shelf break. The large delphinids Tursiops truncatus and Globicephala melas formed mixed groups in many occasions and were observed along the study area around depths of 500m. Grampus griseus was twice as frequent in the south area and densities increased in waters deeper than 600m. As expected, densities of both small and large migratory whales were higher during spring, over the continental slope, in the southeast area. The results presented here provided strong evidence on the importance of the outer continental shelf and slope to a diverse community of cetaceans occurring in the subtropical Southwestern

Larval development sites of the main Culicoides species (Diptera: Ceratopogonidae) in northern Europe and distribution of coprophilic species larvae in Belgian pastures.

PubMed

Zimmer, Jean-Yves; Brostaux, Yves; Haubruge, Eric; Francis, Frédéric

2014-10-15

Some Culicoides species of biting midges (Diptera: Ceratopogonidae) are biological virus vectors worldwide and have indeed been associated with outbreaks of important epizoonoses in recent years, such as bluetongue and Schmallenberg disease in northern Europe. These diseases, which affect domestic and wild ruminants, have caused considerable economic losses. Knowledge of substrates suitable for Culicoides larval development is important, particularly for the main vector temperate species. This study, realized during two years, aimed to highlight the larval development sites of these biting midge species in the immediate surroundings of ten Belgian cattle farms. Moreover, spatial distribution of the coprophilic Culicoides larvae (C. chiopterus and C. dewulfi) within pastures was studied with increasing distance from farms along linear transects (farm-pasture-woodland). A total of 4347 adult specimens belonging to 13 Culicoides species were obtained by incubation of 2131 soil samples belonging to 102 different substrates; 18 of these substrates were suitable for larval development. The Obsoletus complex (formed by two species) was observed in a wide range of substrates, including silage residues, components of a chicken coop, dung adhering to walls inside stables, leftover feed along the feed bunk, a compost pile of sugar beet residues, soil of a livestock trampling area, and decaying wood, while the following served as substrates for the other specimens: C. chiopterus, mainly cow dung; C. dewulfi, cow dung and molehill soil; C. circumscriptus, algae; C. festivipennis, algae and soil in stagnant water; C. nubeculosus, algae and silt specifically from the edge of a pond; C. punctatus, mainly wet soil between silage reserves; C. salinarius, algae; and C. stigma, algae and wet soil between silage reserves. We also recorded significantly higher densities of coprophilic larvae within pastures in cow dung located near forests, which is likely due to the localization of

Protection of horses against Culicoides biting midges in different housing systems in Switzerland.

PubMed

Lincoln, V J; Page, P C; Kopp, C; Mathis, A; von Niederhäusern, R; Burger, D; Herholz, C

2015-06-15

Species belonging to the Culicoides complexes (Diptera, Ceratopogonidae), obsoletus and pulicaris, in Switzerland, are potential vectors of both bluetongue virus (BTV) and African horse sickness virus (AHSV). The epidemic of BTV in 2006 and 2007 in Europe has highlighted the risk of introduction and spread of vector-borne diseases in previously non-endemic areas. As a measure of prevention, as part of an integrated control programme in the event of an outbreak of African horse sickness (AHS), it is of utmost importance to prevent, or substantially reduce, contact between horses and Culicoides. The aim of the present study was to compare the effect of three protection systems, net, fan, repellent, or combinations thereof, with regard to their potential to reduce contact between horses and Culicoides. Three different equine housing systems, including individual boxes (BX), group housing systems (GR), and individual boxes with permanently accessible paddock (BP) were used. The efficacy of the protection systems were evaluated by comparing the total number counts of collected female Culicoides, of non-blood-fed and blood-fed Culicoides, respectively, with UV black light traps. The study was conducted over 3 summer months during 2012 and 2013 each and focused on the efficacy and practicality of the protection systems. The repellent was tested in 2012 only and not further investigated in 2013, as it showed no significant effect in reducing Culicoides collected in the light traps. Net protection system provided the best overall protection for the total number of female Culicoides, non-blood-fed and blood-fed Culicoides in all tested housing systems. The net, with a pore size of 0.1825 mm(2), reduced the total number of Culicoides collected in the housing systems BP, GR and BX by 98%, 85% and 67%, respectively. However, in the GR housing system, no significant difference between the effectiveness of the fan and the net were determined for any of the three Culicoides

Integrative taxonomy of anisakid nematodes in stranded cetaceans from Brazilian waters: an update on parasite's hosts and geographical records.

PubMed

Di Azevedo, Maria Isabel N; Carvalho, Vitor L; Iñiguez, Alena M

2017-11-01

Anisakidae are represented mainly by species of Anisakis Dujardin, 1845, Pseudoterranova Krabbe, 1878, and Contracaecum Railliet and Henry, 1913. Integrative taxonomy, based on morphological and genetic approaches, can provide a precise identification of species, increasing the knowledge of their systematics, biology, and evolution. In this study, integrative taxonomy was applied in order to identify, at generic and/or specific taxonomic level, 245 anisakids from 63 cetaceans of 12 different species, which stranded in the Brazilian coast. Parasites from nine hosts were preserved by freezing and, from 54 hosts, were fixed in 70% ethanol (n = 43) or alcohol-formalin-acetic (n = 11) for a period varying from 6 to 19 years. The morphological analysis allowed the identification of 171 specimens at genus level: 120 as Anisakis sp. clade I, 47 as Anisakis sp. clade II, and four as Pseudoterranova sp. From those 15, specimens were identified at species level, seven as Anisakis typica, seven as Anisakis paggiae and one as Anisakis brevispiculata. Moreover, 74 specimens were identified as belonging to Anisakidae family. The genetic analysis based on cox2 gene allowed the identification/confirmation of Anisakis typica (n = 33), Anisakis paggiae (n = 1), and for the first time in the Brazilian coast, Anisakis brevispiculata (n = 4) and Anisakis ziphidarum (n = 1). Additionally, a probably new Anisakis species, genetically close to A. paggiae, is reported infecting a dwarf sperm whale. The results clearly indicated that the preservation of nematodes influenced significantly on the level of taxonomic definition, in both morphological and, mainly, genetic analyses. Pseudoterranova sp. was identified for the first time in the spinner dolphin, Stenella longirostris. The detection of nine A. paggiae specimens, in three Kogia breviceps animals, substantiates the austral occurrence of this species. The identification of A. brevispiculata in Kogia sima and K. breviceps

Influence of Acid Mine Drainage (AMD) on recent phyto- and zooplankton in "the Anthropogenic Lake District" in south-west Poland

NASA Astrophysics Data System (ADS)

Sienkiewicz, Elwira; Gasiorowski, Michal

2015-04-01

widespread neutralization of lake ecosystems, what encompassing both recovery of water chemistry and rebuilding of biota communities. Studies have confirmed, that phyto- and zooplankton living nowadays in lakes located on this area, where exploitation of lignite ended at the beginning of 20th century, indicate completely recovery from acidification caused by coal mine activities. Presently, the lakes were dominated by planktonic diatoms and Cladocera taxa, such as Discostella pseudostelligera (Hust.) Houk & Klee and Bosmina longirostris, respectively.

Balancing habitat delivery for breeding marsh birds and nonbreeding waterfowl: An integrated waterbird management and monitoring approach at Clarence Cannon National Wildlife Refuge, Missouri

USGS Publications Warehouse

Loges, Brian W.; Lyons, James E.; Tavernia, Brian G.

2017-08-23

The Clarence Cannon National Wildlife Refuge (CCNWR) in the Mississippi River flood plain of eastern Missouri provides high quality emergent marsh and moist-soil habitat benefitting both nesting marsh birds and migrating waterfowl. Staff of CCNWR manipulate water levels and vegetation in the 17 units of the CCNWR to provide conditions favorable to these two important guilds. Although both guilds include focal species at multiple planning levels and complement objectives to provide a diversity of wetland community types and water regimes, additional decision support is needed for choosing how much emergent marsh and moist-soil habitat should be provided through annual management actions.To develop decision guidance for balanced delivery of high-energy waterfowl habitat and breeding marsh bird habitat, two measureable management objectives were identified: nonbreeding Anas Linnaeus (dabbling duck) use-days and Rallus elegans (king rail) occupancy of managed units. Three different composite management actions were identified to achieve these objectives. Each composite management action is a unique combination of growing season water regime and soil disturbance. The three composite management actions are intense moist-soil management (moist-soil), intermediate moist-soil (intermediate), and perennial management, which idles soils disturbance (perennial). The two management objectives and three management options were used in a multi-criteria decision analysis to indicate resource allocations and inform annual decision making. Outcomes of the composite management actions were predicted in two ways and multi-criteria decision analysis was used with each set of predictions. First, outcomes were predicted using expert-elicitation techniques and a panel of subject matter experts. Second, empirical data from the Integrated Waterbird Management and Monitoring Initiative collected between 2010 and 2013 were used; where data were lacking, expert judgment was used. Also, a

Sora rail studies on the Patuxent River, Maryland

USGS Publications Warehouse

Haramis, M.; Kearns, G.D.

1999-01-01

The freshwater marshes of the tidal Patuxent River are well known for their annual fall concentration of migrant soras (Porzana carolina) and were formerly the most famous rail hunting grounds in the Chesapeake Bay region. Because of concern over the apparent long-term decline in number of soras and the decline in the quality of the Patuxent marshes, especially the loss of wild rice (Zizania aquatica), the Maryland National-Capital Park and Planning Commission (MNCPPC), co-steward of the Jug Bay National Estuarine Research Reserve, sponsored rail-related research beginning in 1987. Past efforts focused on developing efficient trapping techniques, age and sex criteria, and monitonng body mass dynamics. Noted progress was made in developing digital playback systems and trap improvements to enhance sora captures. These improvements increased capture success by over an order of magnitude and resulted in capture of 2,315 soras and 276 Virginia rails (Rallus limicola) in the 5 year period, 1993-97. Although these methods demonstrate the efficacy of banding large numbers of soras on migration and possibly winter concentration areas, captures at the Patuxent River site have been 70-90% hatching-year birds and recoveries and recaptures have been virtually nonexistent. With the present effort, this outcome precludes population parameter estimation using traditional capture-recapture or recovery model methodologies. In 1996, studies were initiated to employ radio telemetry methods to investigate length of stay, habitat use, survival, and migration characteristics of fall migrant soras. These studies are ongoing and will be continued through 1998 with a grant from the U.S. Fish and Wildlife Service's Webless Migratory Game Bird Research Program and support from the U.S. Geological Survey's Patuxent Wildlife Research Center. Supplemental funding has also been provided by MNCPPC, FWS Region 5, the Maryland Ornithological Society, Quail Unlimited, and Prince Georges Community

Final integrated trip report: site visits to Area 50, Andersen Air Force Base, Guam National Wildlife Refuge, War in the Pacific National Historical Park, Guam, Rota and Saipan, CNMI, 2004-2005

USGS Publications Warehouse

Hess, Steven C.; Pratt, Linda W.

2006-01-01

Limestone forests are the most diverse natural plant communities of Guam. Like other natural vegetation types, these forests have a long history of anthropogenic disturbances, being altered and shaped by humans for more than 4,000 years. Although this occupation represents a relatively long human influence in comparison to other Pacific islands, animals associated with humans, such as commensal rodents, arrived in these islands beginning only 1,000 years ago, and larger mammals, such as pigs (Sus scrofa), may not have arrived until European contact. Limestone forests, which also occur on several other Mariana Islands, developed in the presence of frequent tropical storms and are therefore well adapted to this type of natural disturbance regime. However, recent human activities including large scale clearing and conversion combined with the presence of high levels of alien herbivores and seed predators, and the loss of ecological services provided by the former native avifauna may be causing the decline of Guam's forests. Limestone forests on northern Guam, much like those of other Mariana Islands, were heavily cleared for the construction of military installations during World War II. The accidental introduction of the Brown Tree Snake (Boiga irregularis; BTS) around this same period subsequently accelerated the disappearance of Guam's native avifauna and other endemic terrestrial vertebrates, and with them, seed dispersal, pollination, and the predatory regulation of herbivorous insects. Guam and the Mariana Islands contained a high proportion (32 pecent) of endemic bird species, with 4 forms endemic to Guam alone: the now extinct Guam Flycatcher (Myiagra freycineti), and Guam Bridled White-eye (Zosterops conspicillatpicillata), one of three island endemic subspecies from the Marianas; Guam rail (Rallus owstonii); and Guam Kingfisher (Todiramphus cinnamominus cinnamominus), an island endemic subspecies of the regionally endemic Micronesian Kingfisher. Guam once

Mercury in the atmospheric and coastal environments of Mexico.

PubMed

Ruelas-Inzunza, Jorge; Delgado-Alvarez, Carolina; Frías-Espericueta, Martín; Páez-Osuna, Federico

2013-01-01

the liver of the olivaceous cormorant (P. olivaceous).Specimens from stranded marine mammals were also analyzed; levels of Hg ranged from 70.35 flg g-1 dry wt in the liver of stranded spinner dolphin (S. longirostris ), to0.145 flg g-1 dry wt in the muscle of gray whale (E. robustus). The presence of Hgin these marine animals is not thought to have caused the stranding of the animals.Other organisms like macroalgae and vestimentiferan tube worms were used to monitor the occurrence of Hg in the aquatic environment; levels were comparable to data reported on similar organisms from other areas of the world. Few investigation shave been carried out concerning the mercury content in human organs/tissues in Mexico. Considering the potential deleterious effects of Hg on kidney, lung, and the central nervous system, more information about human exposure to organic and inorganic forms of mercury and their effects is needed, both in Mexico and elsewhere.