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Sample records for refractory organic matter

  1. Molecular-level dynamics of refractory dissolved organic matter

    NASA Astrophysics Data System (ADS)

    Niggemann, J.; Gerdts, G.; Dittmar, T.

    2012-04-01

    Refractory dissolved organic matter (DOM) accounts for most of the global oceanic organic carbon inventory. Processes leading to its formation and factors determining its stability are still largely unknown. We hypothesize that refractory DOM carries a universal molecular signature. Characterizing spatial and temporal variability in this universal signature is a key to understanding dynamics of refractory DOM. We present results from a long-term study of the DOM geo-metabolome in the open North Sea. Geo-metabolomics considers the entity of DOM as a population of compounds, each characterized by a specific function and reactivity in the cycling of energy and elements. Ten-thousands of molecular formulae were identified in DOM by ultrahigh resolution mass spectrometry analysis (FT-ICR-MS, Fourier-Transform Ion Cyclotron Resonance Mass Spectrometry). The DOM pool in the North Sea was influenced by a complex interplay of processes that produced, transformed and degraded dissolved molecules. We identified a stable fraction in North Sea DOM with a molecular composition similar to deep ocean DOM. Molecular-level changes in this stable fraction provide novel information on dynamics and interactions of refractory DOM.

  2. Detecting refractory organic matter on Mars: how derivatization will help

    NASA Astrophysics Data System (ADS)

    Freissinet, C.; Kashyap, S.; Glavin, D. P.; Buch, A.; Brault, A.; Mahaffy, P. R.

    2012-12-01

    The search for organic molecules on Mars can provide important first clues of extinct or extant biota on the planet. Gas Chromatography Mass Spectrometry (GC-MS) is currently the most relevant space-compatible analytical tool for the detection of organics. Nevertheless, GC separation is intrinsically restricted to volatile molecules, and a lot of the molecules of exobiological interest are refractory or polar. To analyze these organics such as amino acids, nucleobases and carboxylic acids, an additional derivatization step is required to transform them into volatile derivatives that are amenable to GC analysis. As part of the Sample Analysis at Mars (SAM) experiment onboard Mars Science Laboratory (MSL) Curiosity rover which successfully landed on Mars on August 5, 2012, a single-step protocol of extraction and chemical derivatization with the silylating reagent N-methyl-N-(tert-butyldimethylsilyl)-trifluoroacetamide MTBSTFA has been developed to reach a wide range of astrobiology-relevant refractory organic molecules. Seven cups on SAM are devoted to MTBSTFA derivatization. However, this chemical reaction adds a protective silyl group in place of each labile hydrogen, which make the molecule non-identifiable in common mass spectra libraries. We thus created an extended library of mass spectra of derivatized compounds of interest, considering their potential occurrence in Mars soils. We then looked specifically at these compounds using the existing and the newly created library, in various Mars analog soils. To enable a more accurate interpretation of the in situ derivatization GC-MS results that will be obtained by SAM, the lab experiments are performed in the restrictive conditions of the SAM flight instrument. First experiments display promising results, the system permitting an extraction and detection of several proteinic amino and carboxylic acids from Martian representative matrices. Preliminary results show a lack of derivatized organic molecules in

  3. Coupled Ocean-Atmosphere Loss of Refractory Marine Dissolved Organic Matter

    NASA Astrophysics Data System (ADS)

    Kieber, D. J.; Keene, W. C.; Frossard, A. A.; Long, M. S.; Russell, L. M.; Maben, J. R.; Kinsey, J. D.; Tyssebotn, I. M.; Quinn, P.; Bates, T. S.

    2013-12-01

    Marine aerosol produced in the oceans from bursting bubbles and breaking waves is number dominated by submicron aerosol that are highly enriched in marine organic matter relative to seawater. Recent studies suggest that these organic-rich, submicron aerosol have a major impact on tropospheric chemistry and climate. It has been assumed this marine-derived aerosol organic matter is of recent origin stemming from biological activity in the photic zone. However, we deployed a marine aerosol generator on a recent cruise in the Sargasso Sea with seawater collected from 2500 m and showed that the aerosol generated from this seawater was enriched with organic matter to the same level as observed in surface Sargasso seawater, implying that the marine organic matter flux from the oceans into atmospheric aerosol is partly due to marine organic matter not of recent origin. We propose that marine aerosol production and subsequent physical and photochemical atmospheric evolution is the main process whereby old, refractory organic matter is removed from the oceans, thereby closing the carbon budget in the oceans and solving a long-standing conundrum regarding the removal mechanism for this organic matter in the sea. The implications of this study for couplings in the ocean-atmosphere cycling of organic matter will be discussed.

  4. Synthesis of refractory organic matter in the ionized gas phase of the solar nebula

    PubMed Central

    Kuga, Maïa; Marty, Bernard; Marrocchi, Yves; Tissandier, Laurent

    2015-01-01

    In the nascent solar system, primitive organic matter was a major contributor of volatile elements to planetary bodies, and could have played a key role in the development of the biosphere. However, the origin of primitive organics is poorly understood. Most scenarios advocate cold synthesis in the interstellar medium or in the outer solar system. Here, we report the synthesis of solid organics under ionizing conditions in a plasma setup from gas mixtures (H2(O)−CO−N2−noble gases) reminiscent of the protosolar nebula composition. Ionization of the gas phase was achieved at temperatures up to 1,000 K. Synthesized solid compounds share chemical and structural features with chondritic organics, and noble gases trapped during the experiments reproduce the elemental and isotopic fractionations observed in primitive organics. These results strongly suggest that both the formation of chondritic refractory organics and the trapping of noble gases took place simultaneously in the ionized areas of the protoplanetary disk, via photon- and/or electron-driven reactions and processing. Thus, synthesis of primitive organics might not have required a cold environment and could have occurred anywhere the disk is ionized, including in its warm regions. This scenario also supports N2 photodissociation as the cause of the large nitrogen isotopic range in the solar system. PMID:26039983

  5. Synthesis of refractory organic matter in the ionized gas phase of the solar nebula.

    PubMed

    Kuga, Maïa; Marty, Bernard; Marrocchi, Yves; Tissandier, Laurent

    2015-06-01

    In the nascent solar system, primitive organic matter was a major contributor of volatile elements to planetary bodies, and could have played a key role in the development of the biosphere. However, the origin of primitive organics is poorly understood. Most scenarios advocate cold synthesis in the interstellar medium or in the outer solar system. Here, we report the synthesis of solid organics under ionizing conditions in a plasma setup from gas mixtures (H2(O)-CO-N2-noble gases) reminiscent of the protosolar nebula composition. Ionization of the gas phase was achieved at temperatures up to 1,000 K. Synthesized solid compounds share chemical and structural features with chondritic organics, and noble gases trapped during the experiments reproduce the elemental and isotopic fractionations observed in primitive organics. These results strongly suggest that both the formation of chondritic refractory organics and the trapping of noble gases took place simultaneously in the ionized areas of the protoplanetary disk, via photon- and/or electron-driven reactions and processing. Thus, synthesis of primitive organics might not have required a cold environment and could have occurred anywhere the disk is ionized, including in its warm regions. This scenario also supports N2 photodissociation as the cause of the large nitrogen isotopic range in the solar system. PMID:26039983

  6. Inefficient microbial production of refractory dissolved organic matter in the ocean.

    PubMed

    Osterholz, Helena; Niggemann, Jutta; Giebel, Helge-Ansgar; Simon, Meinhard; Dittmar, Thorsten

    2015-01-01

    Dissolved organic matter (DOM) in the oceans constitutes a major carbon pool involved in global biogeochemical cycles. More than 96% of the marine DOM resists microbial degradation for thousands of years. The composition of this refractory DOM (RDOM) exhibits a molecular signature ubiquitously detected in the deep oceans. Surprisingly efficient microbial transformation of labile into stable forms of DOM has been shown previously, implying that microorganisms apparently produce far more RDOM than needed to sustain the global pool. Here we show, by assessing the microbial formation and transformation of DOM in unprecedented molecular detail for 3 years, that most of the microbial DOM is different from RDOM in the ocean. Only <0.4% of the net community production is channelled into a form of DOM that is undistinguishable from oceanic RDOM. Our study provides a molecular background for global models on the production, turnover and accumulation of marine DOM. PMID:26084883

  7. Production of bioavailable and refractory dissolved organic matter by coastal heterotrophic microbial populations

    NASA Astrophysics Data System (ADS)

    Lønborg, Christian; Álvarez-Salgado, Xosé A.; Davidson, Keith; Miller, Axel E. J.

    2009-05-01

    Production of dissolved organic matter (DOM) by heterotrophic microbial communities isolated from Loch Creran (Scotland) was studied in time course incubations in which cells were re-suspended in artificial seawater amended with variable proportions of glucose, ammonium and phosphate. The incubation experiments demonstrated that microheterotrophs released part of the substrate as new DOM, with a production efficiency of 11 ± 1% for DOC, 18 ± 2% for DON and 17 ± 2% for DOP. Estimating the impact of this production in Loch Creran, showed that from 3 ± 1% (DOC) to 72 ± 16% (DOP) of DOM could originate from the heterotrophic microbial community. The produced DOM (PDOM) was both bioavailable (BDOM) and refractory (RDOM). Bioavailability as assessed by the difference between the maximum and the end DOM concentration, was generally higher than found in natural systems, with DOP (73 ± 15%, average ± SD) more bioavailable than DON (70 ± 15%), and DON than DOC (34 ± 13%). The stoichiometry of PDOM was linked to both nutrient uptake and BDOM ratios. Absorption and fluorescence of DOM increased significantly during the incubation time, indicating that microheterotrophs were also a source of coloured DOM (CDOM) and that they produce both bioavailable protein-like and refractory humic-like fluorophores.

  8. Universal molecular features of refractory dissolved organic matter in fresh- and seawater

    NASA Astrophysics Data System (ADS)

    Dittmar, T.; Blasius, B.; Steinbrink, C.; Feenders, C.; Stumm, M.; Christoffers, J.; Niggemann, J.; Gerdts, G.; Osterholz, H.; Seibt, M.; Seidel, M.; Vähätalo, A.

    2012-04-01

    Dissolved organic matter (DOM) is among the largest pools of reduced carbon on Earth's surface. Its molecular structure and the reasons behind its stability in the aquatic environment are unknown. We present a mathematical model that predicts essential molecular features of refractory dissolved organic matter in fresh- and seawater. The model has only eight input variables and can accurately reproduce the presence and abundance of up to 10,000 molecular formulae in aquatic systems. The model was established with ultrahigh-resolution mass spectrometry data of North Pacific deep water (obtained on a 15 Tesla Fourier-transform ion cyclotron resonance mass spectrometer, FT-ICR-MS). We determined the molecular formulae of DOM with help of FT-ICR-MS in >1,000 samples from around the globe, covering a wide variety of open ocean, freshwater and coastal systems. The molecular formulae predicted from our North Pacific deep water model were present in all sea- and fresh water samples. In terrigenous DOM, we detected a second group of compounds that could also accurately be predicted with our model, by using a different set of eight input variables. This exclusively terrigenous compound group was more photo-reactive than the universal compound group. During a two-year sampling period at a continental shelf station, the universal DOM compounds were always present at their predicted abundance. During plankton blooms, additional compounds were produced that did not match our model and that did not persist on a longer term. The universal DOM pattern was also not observed in mesocosm experiments where algae and bacteria blooms were artificially induced. Refractory DOM in any aquatic system not only shares the same molecular formulae at the same relative abundance, but compounds with the same molecular formulae most likely have the same molecular structure, independent of the origin of DOM. Fragmentation experiments in the FT-ICR-MS on a wide range of molecular formulae revealed

  9. Evidence of refractory organic matter preserved in the mudstones of Yellowknife Bay and the Murray Formations

    NASA Astrophysics Data System (ADS)

    Eigenbrode, J. L.; Steele, A.; Summons, R. E.; Sutter, B.; McAdam, A.; Franz, H. B.; Mahaffy, P. R.; Conrad, P. G.; Freissinet, C.; Glavin, D. P.; Millan, M.; Ming, D. W.

    2015-12-01

    Volatiles from high-temperature (above 500°C) pyrolysis of drilled and sieved deltaic/lacustrine mudstones at Yellowknife Bay and Pahrump Hills were detected by the Sample Analysis at Mars (SAM) instrument's evolved gas analysis experiment onboard the Curiosity rover in Gale Crater, Mars. Mass fragments detected from the mudstones are consistent with C1-C4 alkyl and single-ring aromatic components that evolve at different temperatures and often in multiple phases. Concurrent release of oxidized sulfur (sulfur dioxide and sulfur trioxide), sulfide gases (hydrogen sulfide, carbonyl sulfide, carbon disulfide, dimethylsulfide or thiol, and thiophene) suggest that either these gases are evolving directly from the mudstone or are products of gas phase reactions in the SAM oven, or both. Multiple chlorohydrocarbon releases are also observed in analysis of the Mojave mudstone indicating punctuated organic releases from the sample. The organic signatures observed are unique to specific samples and are not observed in blanks or all samples, nor can the SAM background explain them. These results suggest that geologically refractory organic matter has been preserved in some Hesperian mudstones despite possible acid-sulfate weathering (as suggested by jarosite in Mojave) and exposure to ionizing cosmic rays after exhumation. We will report on ongoing study of these samples.

  10. Molecular transformation and degradation of refractory dissolved organic matter in the Atlantic and Southern Ocean

    NASA Astrophysics Data System (ADS)

    Lechtenfeld, Oliver J.; Kattner, Gerhard; Flerus, Ruth; McCallister, S. Leigh; Schmitt-Kopplin, Philippe; Koch, Boris P.

    2014-02-01

    More than 90% of the global ocean dissolved organic carbon (DOC) is refractory, has an average age of 4000-6000 years and a lifespan from months to millennia. The fraction of dissolved organic matter (DOM) that is resistant to degradation is a long-term buffer in the global carbon cycle but its chemical composition, structure, and biochemical formation and degradation mechanisms are still unresolved. We have compiled the most comprehensive molecular dataset of 197 Fourier transform ion cyclotron resonance mass spectrometry (FT-ICR MS) analyses from solid-phase extracted marine DOM covering two major oceans, the Atlantic sector of the Southern Ocean and the East Atlantic Ocean (ranging from 50° N to 70° S). Molecular trends and radiocarbon dating of 34 DOM samples (comprising Δ14C values from -229‰ to -495‰) were combined to model an integrated degradation rate for bulk DOC resulting in a predicted age of >24 ka for the most persistent DOM fraction. First order kinetic degradation rates for 1557 mass peaks indicate that numerous DOM molecules cycle on timescales much longer than the turnover of the bulk DOC pool (estimated residence times of up to ~100 ka) and the range of validity of radiocarbon dating. Changes in elemental composition were determined by assigning molecular formulae to the detected mass peaks. The combination of residence times with molecular information enabled modelling of the average elemental composition of the slowest degrading fraction of the DOM pool. In our dataset, a group of 361 molecular formulae represented the most stable composition in the oceanic environment (“island of stability”). These most persistent compounds encompass only a narrow range of the molecular elemental ratios H/C (average of 1.17 ± 0.13), and O/C (average of 0.52 ± 0.10) and molecular masses (360 ± 28 and 497 ± 51 Da). In the Weddell Sea DOC concentrations in the surface waters were low (46.3 ± 3.3 μM) while the organic radiocarbon was significantly

  11. Redox effects on the microbial degradation of refractory organic matter in marine sediments

    NASA Astrophysics Data System (ADS)

    Reimers, Clare E.; Alleau, Yvan; Bauer, James E.; Delaney, Jennifer; Girguis, Peter R.; Schrader, Paul S.; Stecher, Hilmar A.

    2013-11-01

    Microbially mediated reduction-oxidation (redox) reactions are often invoked as being the mechanisms by which redox state influences the degradation of sedimentary organic matter (OM) in the marine environment. To evaluate the effects of elevated, oscillating and reduced redox potentials on the fate of primarily aged, mineral-adsorbed OM contained in continental shelf sediments, we used microbial fuel cells to control redox state within and around marine sediments, without amending the sediments with reducing or oxidizing substances. We subsequently followed electron fluxes in the redox elevated and redox oscillating treatments, and related sediment chemical, isotopic and bacterial community changes to redox conditions over a 748-day experimental period. The electron fluxes of the elevated and oscillating redox cells were consistent with models of organic carbon (OC) oxidation with time-dependent first-order rate constants declining from 0.023 to 0.005 y-1, in agreement with rate constants derived from typical OC profiles and down core ages of offshore sediments, or from sulfate reduction rate measurements in similar sediments. Moreover, although cumulative electron fluxes were higher in the continuously elevated redox treatment, incremental rates of electron harvesting in the two treatments converged over the 2 year experiment. These similar rates were reflected in chemical indicators of OM metabolism such as dissolved OC and ammonia, and particulate OC concentrations, which were not significantly different among all treatments and controls over the experimental time-scale. In contrast, products of carbonate and opal dissolution and metal mobilization showed greater enrichments in sediments with elevated and oscillating redox states. Microbial community composition in anode biofilms and surrounding sediments was assessed via high-throughput 16S rRNA gene sequencing, and these analyses revealed that the elevated and oscillatory redox treatments led to the

  12. Estimating the removal efficiency of refractory dissolved organic matter in wastewater treatment plants using a fluorescence technique.

    PubMed

    Hur, Jin; Lee, Tae-Hwan; Lee, Bo-Mi

    2011-12-01

    The spectroscopic characteristics and relative distribution of refractory dissolved organic matter (R-DOM) in sewage have been investigated using the influent and the effluent samples collected from 15 large-scale biological wastewater treatment plants (WWTPs). Correlation between the characteristics of the influent and the final removal efficiency was also examined. Enhancement of specific ultraviolet absorbance (SUVA) and a higher R-DOM distribution ratio were observed for the effluent DOM compared with the influent DOM. However, the use of conventional rather than advanced biological treatments did not appear to affect either the effluent DOM or the removal efficiency, and there was no statistical significant difference between the two. No consistent trend was observed in the changes in the synchronous fluorescence spectra of the DOM after biological treatment. Irrespective of the treatment option, the removal efficiency of DOM was greater when the influent DOM had a lower SUVA, reduced DOC-normalized humic substance-like fluorescence, and a lower R-DOM distribution. These results suggest that selected characteristics of the influent may provide an indication of DOM removal efficiency in WWTPs. For R-DOM removal efficiency, however, similar characteristics of the influent did not show a negative relationship, and even exhibited a slight positive correlation, suggesting that the presence of refractory organic carbon structures in the influent sewage may stimulate microbial activity and inhibit the production of R-DOM during biological treatment. PMID:22439572

  13. Experimental evidence for an effect of early-diagenetic interaction between labile and refractory marine sedimentary organic matter on nitrogen dynamics

    NASA Astrophysics Data System (ADS)

    Turnewitsch, Robert; Domeyer, Bettina; Graf, Gerhard

    2007-05-01

    In most natural sedimentary systems labile and refractory organic material (OM) occur concomitantly. Little, however, is known on how different kinds of OM interact and how such interactions affect early diagenesis in sediments. In a simple sediment experiment, we investigated how interactions of OM substrates of different degradability affect benthic nitrogen (N) dynamics. Temporal evolution of a set of selected biogeochemical parameters was monitored in sandy sediment over 116 days in three experimental set-ups spiked with labile OM (tissue of Mytilus edulis), refractory OM (mostly aged Zostera marina and macroalgae), and a 1:1 mixture of labile and refractory OM. The initial amounts of particulate organic carbon (POC) were identical in the three set-ups. To check for non-linear interactions between labile and refractory OM, the evolution of the mixture system was compared with the evolution of the simple sum of the labile and refractory systems, divided by two. The sum system is the experimental control where labile and refractory OM are virtually combined but not allowed to interact. During the first 30 days there was evidence for net dissolved-inorganic-nitrogen (DIN) production followed by net DIN consumption. (Here 'DIN' is the sum of ammonium, nitrite and nitrate.) After ˜ 30 days a quasi steady state was reached. Non-linear interactions between the two types of OM were reflected by three main differences between the early-diagenetic evolutions of nitrogen dynamics of the mixture and sum (control) systems: (1) In the mixture system the phases of net DIN production and consumption commenced more rapidly and were more intense. (2) The mixture system was shifted towards a more oxidised state of DIN products [as indicated by increased (nitrite + nitrate)/(ammonium) ratios]. (3) There was some evidence that more OM, POC and particulate nitrogen were preserved in the mixture system. That is, in the mixture system more particulate OM was preserved while a higher

  14. CONDENSED MATTER: STRUCTURAL, MECHANICAL, AND THERMAL PROPERTIES: Influence of Selective Edge Removal and Refractory Period in a Self-Organized Critical Neuron Model

    NASA Astrophysics Data System (ADS)

    Lin, Min; Zhao, Gang; Chen, Tian-Lun

    2009-08-01

    A simple model for a set of integrate-and-fire neurons based on the weighted network is introduced. By considering the neurobiological phenomenon in brain development and the difference of the synaptic strength, we construct weighted networks develop with link additions and followed by selective edge removal. The network exhibits the small-world and scale-free properties with high network efficiency. The model displays an avalanche activity on a power-law distribution. We investigate the effect of selective edge removal and the neuron refractory period on the self-organized criticality of the system.

  15. Self-Organizing Maps with Refractory Periods

    NASA Astrophysics Data System (ADS)

    Neme, Antonio; Mireles, Victor

    2008-11-01

    Self-organizing map (SOM) has been studied as a model of map formation in the brain cortex. However, the original model present several oversimplifications. For example, neurons in the cortex present a refractory period in which they are not able to be activated, restriction that should be included in the SOM if a better model is to be achieved. Although several modifications have been studied in order to include this biological restriction to the SOM, they do not reflect biological plausibility. Here, we present a modification in the SOM that allows neurons to enter a refractory period (SOM-RP) if they are the best matching unit (BMU) or if they belong to its neighborhood. This refractory period is the same for all affected neurons, which contrasts with previous models. By including this biological restriction, SOM dynamics resembles in more detail the behavior shown by the cortex, such as non-radial activity patterns and long distance influence, besides the refractory period. As a side effect, two error measures are lower in maps formed by SOM-RP than in those formed by SOM.

  16. Self-Organizing Maps with Refractory Periods

    SciTech Connect

    Neme, Antonio; Mireles, Victor

    2008-11-06

    Self-organizing map (SOM) has been studied as a model of map formation in the brain cortex. However, the original model present several oversimplifications. For example, neurons in the cortex present a refractory period in which they are not able to be activated, restriction that should be included in the SOM if a better model is to be achieved. Although several modifications have been studied in order to include this biological restriction to the SOM, they do not reflect biological plausibility. Here, we present a modification in the SOM that allows neurons to enter a refractory period (SOM-RP) if they are the best matching unit (BMU) or if they belong to its neighborhood. This refractory period is the same for all affected neurons, which contrasts with previous models. By including this biological restriction, SOM dynamics resembles in more detail the behavior shown by the cortex, such as non-radial activity patterns and long distance influence, besides the refractory period. As a side effect, two error measures are lower in maps formed by SOM-RP than in those formed by SOM.

  17. Removal of High -Concentration and Refractory Organic Matter from Diosgenin Manufacture Wastewater : a case study of a demonstration project in Hubei Province, P R China

    NASA Astrophysics Data System (ADS)

    Bao, J.; Wang, L.

    2009-12-01

    Wastewater from diosgenin manufacture is dark brown (3,500 ~4,000 times of the chroma) and acidic(pH=0.8~1.5)with high concentration of organic matter(COD=25,000~38,000 mg/L)and poor biodegradability(BOD5/COD= 0.25~0.30). It is highly toxic to biota due to the water-soluble saponin, tannins and pectin. Therefore removal of the organic matter is of great importance before the discharge of the wastewater into the environment. Here we presented a set of data from a demonstration project in Hubei province, P R China with an improved technics. This technics, focusing on the treatment of diosgenin wastewater, included hydrolytic acidification, internal electrolysis, neutralization, aerating-improved Up-flow Anaerobic Sludge Bed (UASB) and bio-contact oxidation treatment in sequence to remove the organic matter. After 60 days of starting-up, the water quality from hydrolytic acidification reactor was greatly improved. The effluent became clear, indicating the obvious removal of suspended solids in the water; the ratio of BOD/COD increased to 0.44, suggesting an significant increase of biodegradability; the content of volatile fatty acid (VFA) increased from 22.6 mmol/L to 86.8 mmol/L and the volume loading of COD reached 9.48 kg COD/(m3d). Basically at this stage the removal efficiency of COD was stabilized at 25%. Further treatment was conducted on the effluent from hydrolytic acidification reactor through the Improved UASB Reactor after the internal electrolysis and neutralization. The Improved UASB Reactor can start up at room temperature with an influent of 1,500 mg/L COD and inflow rate of 50(m3/d). Then, temperature was increased gradually to 38 oC (± 2 oC) to optimize the growth of the mesophilic anaerobes in the reactor. The content of VFA of the effluent was controlled below 8 mmol/L to guarantee the pH in the range of 6.8~7.2. After 150 days of debugging, the COD of the influent to UASB increased to 9,600 mg/L, hydraulic retaining time (HRT) was around 70 hrs

  18. soil organic matter fractionation

    NASA Astrophysics Data System (ADS)

    Osat, Maryam; Heidari, Ahmad

    2010-05-01

    Carbon is essential for plant growth, due to its effects on other soil properties like aggregation. Knowledge of dynamics of organic matter in different locations in the soil matrix can provide valuable information which affects carbon sequestration and soil the other soil properties. Extraction of soil organic matter (SOM) fractions has been a long standing approach to elucidating the roles of soil organic matter in soil processes. Several kind fractionation methods are used and all provide information on soil organic matter function. Physical fractionation capture the effects on SOM dynamics of the spatial arrangement of primary and secondary organomineral particles in soil while chemical fractionation can not consider the spatial arrangement but their organic fractions are suitable for advanced chemical characterization. Three method of physical separation of soil have been used, sieving, sedimentation and densitometry. The distribution of organic matter within physical fractions of the soil can be assessed by sieving. Sieving separates soil particles based strictly on size. The study area is located on north central Iran, between 35° 41'- 36° 01' N and 50° 42'- 51° 14' E. Mean annual precipitation about 243.8 mm and mean annual air temperature is about 14.95 °C. The soil moisture and temperature regime vary between aridic-thermic in lower altitudes to xeric-mesic in upper altitudes. More than 36 surface soil samples (0-20 cm) were collected according to land-use map units. After preliminary analyzing of samples 10 samples were selected for further analyses in five size fractions and three different time intervals in September, January and April 2008. Fractionation carried out by dry sieving in five classes, 1-2 mm, 0.5-1 mm, 270 μm-0.5mm, 53-270 μm and <53 μm. Organic matter and C/N ratio were determined for all fractions at different time intervals. Chemical fractionation of organic matter also carried out according to Tan (2003), also Mineralogical

  19. Environmental factors regulating soil organic matter chlorination

    NASA Astrophysics Data System (ADS)

    Svensson, Teresia; Montelius, Malin; Reyier, Henrik; Rietz, Karolina; Karlsson, Susanne; Lindberg, Cecilia; Andersson, Malin; Danielsson, Åsa; Bastviken, David

    2016-04-01

    Natural chlorination of organic matter is common in soils. Despite the widespread abundance of soil chlorinated soil organic matter (SOM), frequently exceeding soil chloride abundance in surface soils, and a common ability of microorganisms to produce chlorinated SOM, we lack fundamental knowledge about dominating processes and organisms responsible for the chlorination. To take one step towards resolving the terrestrial chlorine (Cl) puzzle, this study aims to analyse how environmental factors influence chlorination of SOM. Four factors were chosen for this study: soil moisture (W), nitrogen (N), chloride (Cl) and organic matter quality (C). These factors are all known to be important for soil processes. Laboratory incubations with 36Cl as a Cl tracer were performed in a two soil incubation experiments. It was found that addition of chloride and nitrogen seem to hamper the chlorination. For the C treatment, on the other hand, the results show that chlorination is enhanced by increased availability of labile organic matter (glucose and maltose). Even higher chlorination was observed when nitrogen and water were added in combination with labile organic matter. The effect that more labile organic matter strongly stimulated the chlorination rates was confirmed by the second separate experiment. These results indicate that chlorination was not primarily a way to cut refractory organic matter into digestible molecules, representing one previous hypothesis, but is related with microbial metabolism in other ways that will be further discussed in our presentation.

  20. Is old organic matter simple organic matter?

    NASA Astrophysics Data System (ADS)

    Nunan, Naoise; Lerch, Thomas; Pouteau, Valérie; Mora, Philippe; Changey, Fréderique; Kätterer, Thomas; Herrmann, Anke

    2016-04-01

    Bare fallow soils that have been deprived of fresh carbon inputs for prolonged periods contain mostly old, stable organic carbon. In order to shed light on the nature of this carbon, the functional diversity profiles (MicroResp™, Biolog™ and enzyme activity spectra) of the microbial communities of long-term barefallow soils were analysed and compared with those of the microbial communities from their cultivated counterparts. The study was based on the idea that microbial communities adapt to their environment and that therefore the catabolic and enzymatic profiles would reflect the type of substrates available to the microbial communities. The catabolic profiles suggested that the microbial communities in the long-term bare-fallow soil were exposed to a less diverse range of substrates and that these substrates tended to be of simpler molecular forms. Both the catabolic and enzyme activity profiles suggested that the microbial communities from the long-term bare-fallow soils were less adapted to using polymers. These results do not fit with the traditional view of old, stable carbon being composed of complex, recalcitrant polymers. An energetics analysis of the substrate use of the microbial communities for the different soils suggested that the microbial communities from the long-term bare-fallow soils were better adapted to using readily oxidizable,although energetically less rewarding, substrates. Microbial communities appear to adapt to the deprivation of fresh organic matter by using substrates that require little investment.

  1. The Stable and Radio- Carbon Isotopic Content of Labile and Refractory Carbon in Atmospheric Particulate Matter

    NASA Astrophysics Data System (ADS)

    McNichol, A. P.; Rosenheim, B. E.; Gerlach, D. S.; Hayes, J. M.

    2006-12-01

    Studies of the isotopic content of atmospheric particulate matter are hampered by difficulties in chemically defining the pools of carbon and analytically isolating the different pools. We are conducting studies on reference materials and atmospheric aerosol samples to develop a method to measure stable and radio- carbon isotopes on the labile and refractory carbon. We are using a flow-through combustion system that allows us to combust, collect and measure the isotopic content of the gases produced at all stages of heating/oxidizing. We compare our results to those measured using a chemothermal oxidation method (CTO) (Gustafsson et al., 2001). In this method, refractory carbon is defined as the material remaining after pre- combusting a sample at 375°C in the presence of oxygen for 24 hours. The reference materials are diesel soot, apple leaves and a hybrid of the two (DiesApple), all from NIST. These provide carbon with two well-defined fractions -- the soot provides refractory carbon that is radiocarbon dead and the apple leaves provide organic carbon that is radiocarbon modern. Radiocarbon results from DiesApple indicate that the "refractory" carbon defined by the CTO method is actually a mixture of old and modern carbon that contains over 25% modern carbon. This suggests that charred material formed from the apples leaves during the pre-combustion step is contributing to the fraction we identify as refractory carbon. We are studying this by analyzing the individual materials and the mixture using our flow-through system. First results with this system indicate that the refractory fraction trapped from the DiesApple contains much less modern carbon than the CTO method, less than 7%. We will present detailed concentration and isotopic results of the generation of carbon dioxide during programmed combustion of each of the reference materials. We studied the radiocarbon content of both the total carbon (TC) and refractory carbon in the fine particulate matter (PM

  2. [Refractory cardiac arrest patients in prehospital care, potential organ donors].

    PubMed

    Le Jan, Arnaud; Dupin, Aurélie; Garrigue, Bruno; Sapir, David

    2016-09-01

    Under the authority of the French Biomedicine Agency, a new care pathway integrates refractory cardiac arrest patients into a process of organ donation. It is a medical, logistical and ethical challenge for the staff of the mobile emergency services. PMID:27596502

  3. Coupled ocean-atmosphere loss of marine refractory dissolved organic carbon

    NASA Astrophysics Data System (ADS)

    Kieber, David J.; Keene, William C.; Frossard, Amanda A.; Long, Michael S.; Maben, John R.; Russell, Lynn M.; Kinsey, Joanna D.; Tyssebotn, Inger Marie B.; Quinn, Patricia K.; Bates, Timothy S.

    2016-03-01

    The oceans hold a massive quantity of organic carbon, nearly all of which is dissolved and more than 95% is refractory, cycling through the oceans several times before complete removal. The vast reservoir of refractory dissolved organic carbon (RDOC) is a critical component of the global carbon cycle that is relevant to our understanding of fundamental marine biogeochemical processes and the role of the oceans in climate change with respect to long-term storage and sequestration of atmospheric carbon dioxide. Here we show that RDOC includes surface-active organic matter that can be incorporated into primary marine aerosol produced by bursting bubbles at the sea surface. We propose that this process will deliver RDOC from the sea surface to the atmosphere wherein its photochemical oxidation corresponds to a potentially important and hitherto unknown removal mechanism for marine RDOC.

  4. Ongoing Buildup of Refractory Organic Carbon in Boreal Soils During the Holocene

    NASA Astrophysics Data System (ADS)

    Smittenberg, R. H.; Eglinton, T. I.; Schouten, S.; Damsté, J. S. Sinninghe

    2006-11-01

    Radiocarbon ages of vascular plant wax derived n-alkanes preserved in well-dated Holocene sediments in an anoxic fjord (Saanich Inlet, Canada) were found to be not only substantially older than the depositional age but increasingly so during the Holocene. Assuming that n-alkanes serve as a proxy for recalcitrant terrigenous organic matter, this indicates that the accumulation of refractory organic carbon in soils that developed after the deglaciation of the American Pacific Northwest is ongoing and may still be far from equilibrium with mineralization and erosion rates.

  5. Land Application of Wastes: An Educational Program. Organic Matter - Module 17, Objectives, and Script.

    ERIC Educational Resources Information Center

    Clarkson, W. W.; And Others

    This module sketches out the impact of sewage organic matter on soils. For convenience, that organic matter is separated into the readily decomposable compounds and the more resistant material (volatile suspended solids, refractory organics, and sludges). The fates of those organics are reviewed along with loading rates and recommended soil…

  6. Arctic River organic matter transport

    NASA Astrophysics Data System (ADS)

    Raymond, Peter; Gustafsson, Orjan; Vonk, Jorien; Spencer, Robert; McClelland, Jim

    2016-04-01

    Arctic Rivers have unique hydrology and biogeochemistry. They also have a large impact on the Arctic Ocean due to the large amount of riverine inflow and small ocean volume. With respect to organic matter, their influence is magnified by the large stores of soil carbon and distinct soil hydrology. Here we present a recap of what is known of Arctic River organic matter transport. We will present a summary of what is known of the ages and sources of Arctic River dissolved and particulate organic matter. We will also discuss the current status of what is known about changes in riverine organic matter export due to global change.

  7. Identification of Reactive and Refractory Components of Dissolved Organic Nitrogen by FT-ICR Mass Spectrometry

    NASA Astrophysics Data System (ADS)

    Cooper, W. T.; Podgorski, D. C.; Osborne, D. M.; Corbett, J.; Chanton, J.

    2010-12-01

    Dissolved organic nitrogen is an often overlooked but potentially significant bioavailable component of dissolved organic matter. Studies of bulk DON turnover have been reported, but the compositions of the reactive and refractory components of DON are largely unknown. Here we show the unique ability of atmospheric pressure photoionization (APPI) coupled to ultrahigh resolution mass spectrometry to identify the reactive and refractory components of DON. Figure 1 is an isolated 0.30 m/z window from an ultrahigh resolution APPI FT-ICR mass spectrum of DON in surface waters draining an agricultural area in South Florida. Using this optimized, negative-ion APPI strategy we have been able to identify the reactive and refractory components of DON in these nitrogen-rich waters. Similar results were observed with samples from soil porewaters in sedge-dominated fens and sphagnum-dominated bogs within the Glacial Lake Agassiz Peatlands (GLAP) of northern Minnesota. Surprisingly, microbes appear to initially use similar enzymatic pathways to degrade DON and DOC, often with little release of nitrogen. Figure 1. Isolated 0.30 m/z window at nominal mass 432 from negative-ion APPI FT-ICR mass spectrum of DOM from waters draining an agricultural area in South Florida. Peaks marked contain nitrogen.

  8. Estrone degradation: does organic matter (quality), matter?

    PubMed

    Tan, David T; Temme, Hanna R; Arnold, William A; Novak, Paige J

    2015-01-01

    Understanding the parameters that drive E1 degradation is necessary to improve existing wastewater treatment systems and evaluate potential treatment options. Organic matter quality could be an important parameter. Microbial communities grown from activated sludge seeds using different dissolved organic matter sources were tested for E1 degradation rates. Synthetic wastewater was aged, filter-sterilized, and used as a carbon and energy source to determine if recalcitrant organic carbon enhances E1 degradation. Higher E1 degradation was observed by biomass grown on 8 d old synthetic wastewater compared to biomass grown on fresh synthetic wastewater (P = 0.033) despite much lower concentrations of bacteria. Minimal or no E1 degradation was observed in biomass grown on 2 d old synthetic wastewater. Organic carbon analyses suggest that products of cell lysis or microbial products released under starvation stress stimulate E1 degradation. Additional water sources were also tested: lake water, river water, and effluents from a municipal wastewater treatement plant and a treatment wetland. E1 degradation was only observed in biomass grown in treatment effluent. Nitrogen, dissolved organic carbon, and trace element concentrations were not causative factors for E1 degradation. In both experiments, spectrophotometric analyses reveal degradation of E1 is associated with microbially derived organic carbon but not general recalcitrance. PMID:25454582

  9. Interstellar organic matter in meteorites

    NASA Technical Reports Server (NTRS)

    Yang, J.; Epstein, S.

    1983-01-01

    Deuterium-enriched hydrogen is present in organic matter in such meteorites as noncarbonaceous chondrites. The majority of the unequilibrated primitive meteorites contain hydrogen whose D/H ratios are greater than 0.0003, requiring enrichment (relative to cosmic hydrogen) by isotope exchange reactions taking place below 150 K. The D/H values presented are the lower limits for the organic compounds derived from interstellar molecules, since all processes subsequent to their formation, including terrestrial contamination, decrease their D/H ratios. In contrast, the D/H ratios of hydrogen associated with hydrated silicates are relatively uniform for the meteorites analyzed. The C-13/C-12 ratios of organic matter, irrespective of D/H ratio, lie well within those observed for the earth. Present findings suggest that other interstellar material, in addition to organic matter, is preserved and is present in high D/H ratio meteorites.

  10. INTERACTIONS BETWEEN PHOTOCHEMICAL AND MICROBIAL DECOMPOSITION IN MODIFYING THE BIOLOGICAL AVAILABILITY AND OPTICAL PROPERTIES OF ESTUARINE DISSOLVED ORGANIC MATTER

    EPA Science Inventory

    Direct photodecomposition and photochemically-mediated bacterial degradation (via photochemical modification of otherwise refractory DOM into biologically labile forms) provide
    important pathways for the loss of dissolved organic matter in coastal waters. Here we report
    lab...

  11. Quantification of refractory organic substances in freshwaters: further insight into the response of the voltammetric method.

    PubMed

    Quentel, François; Filella, Montserrat

    2008-11-01

    A recently published method for quantifying refractory organic matter (often referred to as humic substances) in freshwaters was applied to a wide range of International Humic Substance Society (IHSS) humic compounds in order to (i) gain a better understanding of the mechanism of the voltammetric response which is the basis of the analytical method and (ii) provide guidance on choosing the optimal standard to be used. At the same time, the sensitivity of the technique has been increased by switching from the pulse mode initially proposed to the square-wave mode. The results obtained show that (i) differences in adsorption onto the electrode rather than differences in complexation strength are responsible for the differences in the intensity of the signal obtained for the different humic compounds, (ii) carboxylate, N- and S-containing groups do not play a role in the voltammetric signal. PMID:18791870

  12. Extraterrestrial organic matter: a review.

    PubMed

    Irvine, W M

    1998-10-01

    We review the nature of the widespread organic material present in the Milky Way Galaxy and in the Solar System. Attention is given to the links between these environments and between primitive Solar System objects and the early Earth, indicating the preservation of organic material as an interstellar cloud collapsed to form the Solar System and as the Earth accreted such material from asteroids, comets and interplanetary dust particles. In the interstellar medium of the Milky Way Galaxy more than 100 molecular species, the bulk of them organic, have been securely identified, primarily through spectroscopy at the highest radio frequencies. There is considerable evidence for significantly heavier organic molecules, particularly polycyclic aromatics, although precise identification of individual species has not yet been obtained. The so-called diffuse interstellar bands are probably important in this context. The low temperature kinetics in interstellar clouds leads to very large isotopic fractionation, particularly for hydrogen, and this signature is present in organic components preserved in carbonaceous chondritic meteorites. Outer belt asteroids are the probable parent bodies of the carbonaceous chondrites, which may contain as much as 5% organic material, including a rich variety of amino acids, purines, pyrimidines, and other species of potential prebiotic interest. Richer in volatiles and hence less thermally processed are the comets, whose organic matter is abundant and poorly characterized. Cometary volatiles, observed after sublimation into the coma, include many species also present in the interstellar medium. There is evidence that most of the Earth's volatiles may have been supplied by a 'late' bombardment of comets and carbonaceous meteorites, scattered into the inner Solar System following the formation of the giant planets. How much in the way of intact organic molecules of potential prebiotic interest survived delivery to the Earth has become an

  13. Extraterrestrial organic matter: a review

    NASA Technical Reports Server (NTRS)

    Irvine, W. M.

    1998-01-01

    We review the nature of the widespread organic material present in the Milky Way Galaxy and in the Solar System. Attention is given to the links between these environments and between primitive Solar System objects and the early Earth, indicating the preservation of organic material as an interstellar cloud collapsed to form the Solar System and as the Earth accreted such material from asteroids, comets and interplanetary dust particles. In the interstellar medium of the Milky Way Galaxy more than 100 molecular species, the bulk of them organic, have been securely identified, primarily through spectroscopy at the highest radio frequencies. There is considerable evidence for significantly heavier organic molecules, particularly polycyclic aromatics, although precise identification of individual species has not yet been obtained. The so-called diffuse interstellar bands are probably important in this context. The low temperature kinetics in interstellar clouds leads to very large isotopic fractionation, particularly for hydrogen, and this signature is present in organic components preserved in carbonaceous chondritic meteorites. Outer belt asteroids are the probable parent bodies of the carbonaceous chondrites, which may contain as much as 5% organic material, including a rich variety of amino acids, purines, pyrimidines, and other species of potential prebiotic interest. Richer in volatiles and hence less thermally processed are the comets, whose organic matter is abundant and poorly characterized. Cometary volatiles, observed after sublimation into the coma, include many species also present in the interstellar medium. There is evidence that most of the Earth's volatiles may have been supplied by a 'late' bombardment of comets and carbonaceous meteorites, scattered into the inner Solar System following the formation of the giant planets. How much in the way of intact organic molecules of potential prebiotic interest survived delivery to the Earth has become an

  14. Photodissolution of soil organic matter

    USGS Publications Warehouse

    Mayer, L.M.; Thornton, K.R.; Schick, L.L.; Jastrow, J.D.; Harden, J.W.

    2012-01-01

    Sunlight has been shown to enhance loss of organic matter from aquatic sediments and terrestrial plant litter, so we tested for similar reactions in mineral soil horizons. Losses of up to a third of particulate organic carbon occurred after continuous exposure to full-strength sunlight for dozens of hours, with similar amounts appearing as photodissolved organic carbon. Nitrogen dissolved similarly, appearing partly as ammonium. Modified experiments with interruption of irradiation to include extended dark incubation periods increased loss of total organic carbon, implying remineralization by some combination of light and microbes. These photodissolution reactions respond strongly to water content, with reaction extent under air-dry to fully wet conditions increasing by a factor of 3-4 fold. Light limitation was explored using lamp intensity and soil depth experiments. Reaction extent varied linearly with lamp intensity. Depth experiments indicate that attenuation of reaction occurs within the top tens to hundreds of micrometers of soil depth. Our data allow only order-of-magnitude extrapolations to field conditions, but suggest that this type of reaction could induce loss of 10-20% of soil organic carbon in the top 10. cm horizon over a century. It may therefore have contributed to historical losses of soil carbon via agriculture, and should be considered in soil management on similar time scales. ?? 2011 Elsevier B.V.

  15. The contentious nature of soil organic matter.

    PubMed

    Lehmann, Johannes; Kleber, Markus

    2015-12-01

    The exchange of nutrients, energy and carbon between soil organic matter, the soil environment, aquatic systems and the atmosphere is important for agricultural productivity, water quality and climate. Long-standing theory suggests that soil organic matter is composed of inherently stable and chemically unique compounds. Here we argue that the available evidence does not support the formation of large-molecular-size and persistent 'humic substances' in soils. Instead, soil organic matter is a continuum of progressively decomposing organic compounds. We discuss implications of this view of the nature of soil organic matter for aquatic health, soil carbon-climate interactions and land management. PMID:26595271

  16. Synergy of fresh and accumulated organic matter to bacterial growth.

    PubMed

    Farjalla, Vinicius F; Marinho, Claudio C; Faria, Bias M; Amado, André M; Esteves, Francisco de A; Bozelli, Reinaldo L; Giroldo, Danilo

    2009-05-01

    The main goal of this research was to evaluate whether the mixture of fresh labile dissolved organic matter (DOM) and accumulated refractory DOM influences bacterial production, respiration, and growth efficiency (BGE) in aquatic ecosystems. Bacterial batch cultures were set up using DOM leached from aquatic macrophytes as the fresh DOM pool and DOM accumulated from a tropical humic lagoon. Two sets of experiments were performed and bacterial growth was followed in cultures composed of each carbon substrate (first experiment) and by carbon substrates combined (second experiment), with and without the addition of nitrogen and phosphorus. In both experiments, bacterial production, respiration, and BGE were always higher in cultures with N and P additions, indicating a consistent inorganic nutrient limitation. Bacterial production, respiration, and BGE were higher in cultures set up with leachate DOM than in cultures set up with humic DOM, indicating that the quality of the organic matter pool influenced the bacterial growth. Bacterial production and respiration were higher in the mixture of substrates (second experiment) than expected by bacterial production and respiration in single substrate cultures (first experiment). We suggest that the differences in the concentration of some compounds between DOM sources, the co-metabolism on carbon compound decomposition, and the higher diversity of molecules possibly support a greater bacterial diversity which might explain the higher bacterial growth observed. Finally, our results indicate that the mixture of fresh labile and accumulated refractory DOM that naturally occurs in aquatic ecosystems could accelerate the bacterial growth and bacterial DOM removal. PMID:18985269

  17. Formation of analogs of cometary nitrogen-rich refractory organics from thermal degradation of tholin and HCN polymer

    NASA Astrophysics Data System (ADS)

    Bonnet, Jean-Yves; Quirico, Eric; Buch, Arnaud; Thissen, Roland; Szopa, Cyril; Carrasco, Nathalie; Cernogora, Guy; Fray, Nicolas; Cottin, Hervé; Roy, Lena Le; Montagnac, Gilles; Dartois, Emmanuel; Brunetto, Rosario; Engrand, Cécile; Duprat, Jean

    2015-04-01

    Nitrogen-rich refractory organics are scarce phases recovered as a fraction of stratospheric IDPs and constitute the bulk of the organic matter of some ultracarbonaceous Antarctic micrometeorites. They are likely formed under very specific conditions within a nitrogen-rich environment and may provide valuable clues on the origin of the population of interplanetary dusts accreted by Earth. In this study, we produced relevant analogs of such refractory organics characterized in three ultracarbonaceous Antarctic micrometeorites, starting from the carbonization of an HCN polymer and a tholin. Indeed, carbonization is a process that can increase the polyaromatic character toward a structure similar to that observed in these cosmomaterials. Both these precursors were degraded in an Ar atmosphere at 300, 500, 700 and 1000 °C over ∼1 h and characterized by elemental analysis, micro-FTIR and Raman micro-spectroscopy (at 244 and 514 nm excitation wavelengths). Our results show that the precursors evolve along distinct chemical and structural pathways during carbonization and that the influence of the precursor structure is still very strong at 1000 °C. Interestingly, these different carbonization routes appear in the spectral characteristics of the G and D bands of their Raman spectra. Several of the residues present chemical and structural similarities with three recently studied ultracarbonaceous micrometeorites (Dobrica et al. [2011]. Meteorit. Planet. Sci. 46, 1363; Dartois et al. [2013]. Icarus 224, 243) and with N-rich inclusions in stratospheric IDPs. However, the residues do not simultaneously account for the carbon structure (Raman) and the chemical composition (IR, N/C ratio). This indicates that the precursors and/or heating conditions in our experiments are not fully relevant. Despite this lack of full relevancy, the formation of a polyaromatic structure fairly similar to that of UCAMMs and IDPs suggests that the origin of N-rich refractory organics lies in a

  18. Priming of native soil organic matter by pyrogenic organic matter

    NASA Astrophysics Data System (ADS)

    DeCiucies, Silene; Dharmakeerthi, Saman; Whitman, Thea; Woolf, Dominic; Lehmann, Johannes

    2015-04-01

    Priming, in relation to pyrogenic organic matter (PyOM), describes the change in mineralization rate of non-pyrogenic ("native") soil organic matter (nSOM) due to the addition of PyOM. Priming may be 'positive', in that the addition of pyC increases the mineralization rate of native SOM, or 'negative', in that the mineralization rate of nSOM is decreased. Reasons for increased mineralization may include: (i) co-metabolism: microbial decomposition of labile C-additions increases microbial activity, and facilitates additional decomposition of npSOC by active enzymes; (ii) stimulation: substrate additions result in lifted pH, nutrient, oxygen, or water constraints resulting in increased microbial activity. Decreased mineralization may be a result of: (i) inhibition: the opposite of stimulation whereby constraints are aggravated by substrate addition. Substrate addition may also cause inhibition by interfering with enzymes or signaling compounds; (ii) preferential substrate utilization: labile fraction of PyOM additions are preferentially used up by microbes thus causing a decrease in nSOC decomposition; (iii) sorption: organic compounds are adsorbed onto PyOM surfaces, decreasing their rate of mineralization; (iv) stabilization: formation of organo-mineral associations forms stable SOC pools. We have conducted a suite of experiments to investigate these potential interactions. In a seven year long incubation study, PyOM additions increased total OM mineralization for the first 2.5 years, was equal to control after 6.2 years, and was 3% lower after 7.1 years. Cumulative nSOM mineralization was 23% less with the PyOM additions than without, and over 60% of the added PyOM was present in the labile soil fraction after the 7.1 year incubation. Two additional incubation studies, one with and without plants, showed greater nSOM mineralization in the short term and lower nSOM mineralization over the long term. Increased nSOC mineralization due to the presence of plants was

  19. Soil Organic Matter in Agricultural Systems

    Technology Transfer Automated Retrieval System (TEKTRAN)

    In agricultural systems, soil organic matter (SOM) has been recognized as an important source of nutrients and maintains favorable soil structure. Organic matter is considered a major binding agent that stabilizes soil aggregates. Soil aggregates especially, water stable aggregates, are important i...

  20. Release of biodegradable dissolved organic matter from ancient sedimentary rocks

    NASA Astrophysics Data System (ADS)

    Schillawski, Sarah; Petsch, Steven

    2008-09-01

    Sedimentary rocks contain the largest mass of organic carbon on Earth, yet these reservoirs are not well integrated into modern carbon budgets. Here we describe the release of dissolved organic matter (DOM) from OM-rich sedimentary rocks under simulated weathering conditions. Results from column experiments demonstrate slow, sustained release of DOM from ancient sedimentary rocks under simulated weathering conditions. 1H-NMR analysis of shale-derived DOM reveals a highly aliphatic, carbohydrate-poor material distinct from other natural DOM pools. Shale-derived DOM is rapidly assimilated and biodegraded by aerobic heterotrophic bacteria. Consequently, no compositional signature of shale-derived DOM other than 14C-depletion is likely to persist in rivers or other surface reservoirs. Combined, these efforts show that dissolution provides a mechanism for the conversion of refractory kerogen into labile biomass, linking rock weathering with sedimentary OM oxidation and the delivery of aged OM to rivers and ocean margins.

  1. Toward the Formation of Carbonaceous Refractory Matter in High Temperature Hydrocarbon-rich Atmospheres of Exoplanets Upon Micrometeoroid Impact

    NASA Astrophysics Data System (ADS)

    Dangi, Beni B.; Kim, Yong S.; Krasnokutski, Serge A.; Kaiser, Ralf I.; Bauschlicher, Charles W., Jr.

    2015-05-01

    We report on laboratory simulation experiments mimicking the chemical processing of model atmospheres of exoplanets containing C3 and C4 hydrocarbons at moderate temperatures of 400 K upon interaction of catalytic surfaces of micrometeoroids. By utilizing an ultrasonic levitator device and heating singly levitated particles under simulated microgravity conditions, Raman spectroscopy is utilized as a non-invasive tool to probe on line and in situ the conversion of C3 and C4 hydrocarbons to refractory carbonaceous matter on the surfaces of levitated particles. Secondary Ion Mass Spectrometry and electron microscopic imaging were also conducted to gain further insight into the elementary composition and structures of the refractories formed. Our results provide compelling evidence that in the presence of a catalytic surface, which can be supplied in the form of micrometeoroids and atmospheric dust particles, hydrocarbon gases present in the atmospheres of exoplanets can be converted to refractory, carbon-rich carbonaceous matter of mainly graphitic structure with a carbon content of at least 90% at elevated temperatures. This finding might explain the low methane to carbon monoxide (CH4-CO) ratio in the hot Neptune GJ 436b, where the abundant methane photochemically converts to higher order hydrocarbons and ultimately to refractory graphite-like carbon in the presence of a silicon surface.

  2. Trace the evolution of organic matter in interplanetary objects using residue analogues

    NASA Astrophysics Data System (ADS)

    Danger, G.; Fresneau, A.; Abou Mrad, N.; de Marcellus, P.; Orthous-Daunay, F. R.; Modica, P.; Vuitton, V.; Duvernay, F.; Flandinet, L.; Le Sergeant d'Hendecourt, L.; Thissen, R.; Chiavassa, T.

    2015-10-01

    This contribution focuses on one aspect of our work, which is related to the analysis of refractory residues formed from the UV irradiation and the subsequent warming-up to room temperature of astrophysical ice analogs, the RAHIIA project. The understanding of the chemical composition of these refractory residues, commonly called "yellow stuff", as well as the possible pathways to their formation in astrophysical environments, is an important step to establish what kind of organic matter could be available within interplanetary objects such as comets or asteroids, part of which end up as preserved meteorites on telluric planets.

  3. Characterization and source identification of organic matter in view of land uses and heavy rainfall in the Lake Shihwa, Korea.

    PubMed

    Lee, Yeonjung; Hur, Jin; Shin, Kyung-Hoon

    2014-07-15

    The characteristics and sources of organic matter in water of the Lake Shihwa, which receives inputs from rural, urban, and industrial areas, were evaluated by examining the biodegradable organic carbon concentration, fluorescence spectra, and carbon and nitrogen isotope ratios, especially during rainy season and dry season. The organic matter transported from rural areas was of refractory nature, while that of industrial origin decomposed rapidly. As compared to the dry season, the organic matter in the rainy season was characterized by a reduced labile fraction. During the dry season, the autochthonous organic matter dominated in the lake, however, the contributions of allochthonous organic sources by industrial and rural areas significantly increased at rainy season. This investigation revealed that the transport of organic matter of anthropogenic origin to the Lake Shihwa was mainly influenced by heavy rainfall. Moreover, each anthropogenic source could differently influence the occurrence of organic matter in water of the Lake Shihwa. PMID:24841714

  4. Refractory Organic Compounds in Enceladus' Ice Grains and Hydrothermal Activity

    NASA Astrophysics Data System (ADS)

    Postberg, F.; Khawaja, N.; Hsu, H. W.; Sekine, Y.; Shibuya, T.

    2015-12-01

    Cassini's Cosmic Dust Analyzer (CDA) generates time-of-flight mass spectra of individual grains impinging on the instruments target-plate. Following the analysis of salt rich ice grains emitted by Enceladus that indicated a salt-water ocean in contact with the moon's rocky core [1,2] a recent CDA analysis of nano-phase silica particles pointed at hydrothermal activity at the moon's rock/water interface [3]. The results imply temperatures above 80 - 90°C and alkaline pH values around 10 reminiscent of alkaline hydrothermal vents on Earth like the Lost City Hydrothermal Field. In this context the compositional analysis of organic components in CDA mass spectra of the ejected ice grains is of particular relevance. A multitude of volatile organic species has already been identified in the gas component of the plume [4]. As expected, we find more complex organic molecules in ice grains than in the gas indicating aromatic species, amines, and carbonyl group species. The composition of organic-bearing ice grains displays a great diversity indicating a variety of different organic species in varying concentrations. Recent spatially resolved CDA in situ measurements inside Enceladus' plume indicate that these organic compounds are especially frequent in 'young' ice grains that have just been ejected by high velocity jets. We investigate the implications of our findings with respect to ice grain formation at the water surface and inside the icy vents. We constrain the generation of organic compounds at the rock/water interface in the light of hydrothermal activity and the potential for the formation of life precursor molecules in Enceladus' ocean. Ref:[1] Postberg et al., Nature 459, 1098-1101 (2009). [2] Postberg et al., Nature 474, 620-622 (2011). [3]. Hsu, Postberg, Sekine et al., Nature, 519, 207-210 (2015). [4] Waite et al., Nature 460, 487-490 (2009).

  5. Chemodestructive fractionation of soil organic matter

    NASA Astrophysics Data System (ADS)

    Popov, A. I.; Rusakov, A. V.

    2016-06-01

    The method of chemodestructive fractionation is suggested to assess the composition of soil organic matter. This method is based on determination of the resilience of soil organic matter components and/or different parts of organic compounds to the impact of oxidizing agents. For this purpose, a series of solutions with similar concentration of the oxidant (K2Cr2O7), but with linearly increasing oxidative capacity was prepared. Chemodestructive fractionation showed that the portion of easily oxidizable (labile) organic matter in humus horizons of different soil types depends on the conditions of soil formation. It was maximal in hydromorphic soils of the taiga zone and minimal in automorphic soils of the dry steppe zone. The portion of easily oxidizable organic matter in arable soils increased with an increase in the rate of organic fertilizers application. The long-lasting agricultural use of soils and burying of the humus horizons within the upper one-meter layer resulted in the decreasing content of easily oxidizable organic matter. It was found that the portion of easily oxidizable organic matter decreases by the mid-summer or fall in comparison with the spring or early summer period.

  6. ENVIRONMENTAL PHOTOPROCESSES INVOLVING NATURAL ORGANIC MATTER

    EPA Science Inventory

    Current research is reviewed on the photoreactions that occur when sunlight interacts with soil and aquatic organic matter. The primary focus is on photoprocesses involving humic substances. Investigations of the direct photoreactions of humic substances are discussed, with empha...

  7. Molecular characterization of dissolved organic matter (DOM): a critical review.

    PubMed

    Nebbioso, Antonio; Piccolo, Alessandro

    2013-01-01

    Advances in water chemistry in the last decade have improved our knowledge about the genesis, composition, and structure of dissolved organic matter, and its effect on the environment. Improvements in analytical technology, for example Fourier-transform ion cyclotron (FT-ICR) mass spectrometry (MS), homo and hetero-correlated multidimensional nuclear magnetic resonance (NMR) spectroscopy, and excitation emission matrix fluorimetry (EEMF) with parallel factor (PARAFAC) analysis for UV-fluorescence spectroscopy have resulted in these advances. Improved purification methods, for example ultrafiltration and reverse osmosis, have enabled facile desalting and concentration of freshly collected DOM samples, thereby complementing the analytical process. Although its molecular weight (MW) remains undefined, DOM is described as a complex mixture of low-MW substances and larger-MW biomolecules, for example proteins, polysaccharides, and exocellular macromolecules. There is a general consensus that marine DOM originates from terrestrial and marine sources. A combination of diagenetic and microbial processes contributes to its origin, resulting in refractory organic matter which acts as carbon sink in the ocean. Ocean DOM is derived partially from humified products of plants decay dissolved in fresh water and transported to the ocean, and partially from proteinaceous and polysaccharide material from phytoplankton metabolism, which undergoes in-situ microbial processes, becoming refractory. Some of the DOM interacts with radiation and is, therefore, defined as chromophoric DOM (CDOM). CDOM is classified as terrestrial, marine, anthropogenic, or mixed, depending on its origin. Terrestrial CDOM reaches the oceans via estuaries, whereas autochthonous CDOM is formed in sea water by microbial activity; anthropogenic CDOM is a result of human activity. CDOM also affects the quality of water, by shielding it from solar radiation, and constitutes a carbon sink pool. Evidence in support

  8. Dissolved organic matter in anoxic pore waters from Mangrove Lake, Bermuda

    USGS Publications Warehouse

    Orem, W.H.; Hatcher, P.G.; Spiker, E. C.; Szeverenyi, N.M.; Maciel, G.E.

    1986-01-01

    Dissolved organic matter and dissolved inorganic chemical species in anoxic pore water from Mangrove Lake, Bermuda sediments were studied to evaluate the role of pore water in the early diagenesis of organic matter. Dissolved sulphate, titration alkalinity, phosphate, and ammonia concentration versus depth profiles were typical of many nearshore clastic sediments and indicated sulphate reduction in the upper 100 cm of sediment. The dissolved organic matter in the pore water was made up predominantly of large molecules, was concentrated from large quantities of pore water by using ultrafiltration and was extensively tudied by using elemental and stable carbon isotope analysis and high-resolution, solid state 13C nuclear magnetic resonance and infrared spectroscopy. The results indicate that this material has a predominantly polysaccharide-like structure and in addition contains a large amount of oxygen-containing functional groups (e.g., carboxyl groups). The 13C nulcear magnetic resonance spectra of the high-molecular-weight dissolved organic matter resemble those of the organic matter in the surface sediments of Mangrove Lake. We propose that this high-molecular-weight organic matter in pore waters represents the partially degraded, labile organic components of the sedimentary organic matter and that pore waters serve as a conduit for removal of these labile organic components from the sediments. The more refractory components are, thus, selectively preserved in the sediments as humic substances (primarily humin). ?? 1986.

  9. Fecal Microbiota Transplantation for Refractory Clostridium difficile Colitis in Solid Organ Transplant Recipients

    PubMed Central

    Friedman-Moraco, R. J.; Mehta, A. K.; Lyon, G. M.; Kraft, C. S.

    2015-01-01

    Fecal microbiota transplantation (FMT) has been shown to be safe and efficacious in individuals with refractory Clostridium difficile . It has not been widely studied in individuals with immunosuppression due to concerns about infectious complications. We describe two solid organ transplant recipients, one lung and one renal, in this case report that both had resolution of their diarrhea caused by C. difficile after FMT. Both recipients required two FMTs to achieve resolution of their symptoms and neither had infectious complications. Immunosuppressed individuals are at high risk for acquisition of C. difficile and close monitoring for infectious complications after FMT is necessary, but should not preclude its use in patients with refractory disease due to C. difficile . Sequential FMT may be used to achieve cure in these patients with damaged microbiota from antibiotic use and immunosuppression. PMID:24433460

  10. Ionic Liquid Extractions of Soil Organic Matter

    NASA Astrophysics Data System (ADS)

    Patti, Antonio; Macfarlane, Douglas; Clarke, Michael

    2010-05-01

    A large range of ionic liquids with the ability to dissolve different classes of natural biopolymers (e.g. cellulose, lignin, protein) have been reported in the literature. These have the potential to isolate different fractions of soil organic matter, thus yielding novel information that is not available through other extraction procedures. The ionic liquids dimethylammonium dimethylcarbamate (DIMCARB), alkylbenzenesulfonate and 1-butyl-3methylimidazolium chloride (Bmim Cl) can solubilise selected components of soil organic matter. Soil extractions with these materials showed that the organic matter recovered showed chemical properties that were consistent with humic substances. These extracts had a slightly different organic composition than the humic acids extracted using the traditional International Humic Substances Society (IHSS) method. The ionic liquids also solubilised some inorganic matter from the soil. Humic acids recovered with alkali were also partially soluble in the ionic liquids. DIMCARB appeared to chemically interfere with organic extract, increasing the level of nitrogen in the sample. It was concluded that the ionic liquid Bmim Cl may function as a useful solvent for SOM, and may be used to recover organic matter of a different character to that obtained with alkali

  11. Biodegradability of algal-derived organic matter in a large artificial lake by using stable isotope tracers.

    PubMed

    Lee, Yeonjung; Lee, Bomi; Hur, Jin; Min, Jun-Oh; Ha, Sun-Yong; Ra, Kongtae; Kim, Kyung-Tae; Shin, Kyung-Hoon

    2016-05-01

    In order to understand the biodegradability of algal-derived organic matter, biodegradation experiments were conducted with (13)C and (15)N-labeled natural phytoplankton and periphytic algal populations in experimental conditions for 60 days. Qualitative changes in the dissolved organic matter were also determined using parallel factor analysis and the stable carbon isotopic composition of the hydrophobic dissolved organic matter through the experimental period. Although algal-derived organic matter is considered to be easily biodegradable, the initial amounts of total organic carbon newly produced by phytoplankton and periphytic algae remained approximately 16 and 44 % after 60 days, respectively, and about 22 and 43 % of newly produced particulate nitrogen remained. Further, the dissolved organic carbon derived from both algal populations increased significantly after 60 days. Although the dissolved organic matter gradually became refractory, the contributions of the algal-derived organic matter to the dissolved organic matter and hydrophobic dissolved organic matter increased. Our laboratory experimental results suggest that algal-derived organic matter produced by phytoplankton and periphytic algae could contribute significantly to the non-biodegradable organic matter through microbial transformations. PMID:26780057

  12. Sediment organic matter content as a confounding factor in toxicity tests with Chironomus tentans

    SciTech Connect

    Lacey, R.; Watzin, M.C.; McIntosh, A.W.

    1999-02-01

    Physicochemical characteristics of sediment unrelated to contaminant levels and bioavailability may influence the outcome of toxicity tests. In particular, sediment organic matter content has the potential to be a confounding factor in toxicity tests using the midge larva Chironomus tentans because the larvae are infaunal and feed on organic matter in the sediments. To examine the possibility, the authors conducted a series of tests using formulated sediments with varying organic matter contents following the standard US Environmental Protection Agency (US EPA) 10-day C. tentans growth and survival protocol. Formulated sediments made with peat moss, {alpha}-cellulose, and maple leaves were tested. An organic-rich natural sediment diluted with formulated sediment to achieve a range of organic matter contents was also examined. In a final experiment, sediments containing each of the four organic matter sources at the same concentration were tested against one another. Survival was not greatly affected by concentration of organic matter, except at the lowest concentrations in natural sediment, where survival dipped below 70%. In experiments using peat moss, {alpha}-cellulose, and maple leaves, significant differences in C. tentans growth were found at different organic matter concentrations. In contrast, concentration of organic matter in the natural sediment dilution series had little effect on growth, perhaps because much of this material was highly refractory. In the comparison experiment, growth differed significantly among the four sediments, with best growth achieved with {alpha}-cellulose and leaves. These results suggest that both organic matter quantity and quality can be confounding factors in toxicity tests using C. tentans.

  13. Organic Matter Loading Affects Lodgepole Pine Seedling Growth

    NASA Astrophysics Data System (ADS)

    Wei, Xiaohua; Li, Qinglin; Waterhouse, M. J.; Armleder, H. M.

    2012-06-01

    Organic matter plays important roles in returning nutrients to the soil, maintaining forest productivity and creating habitats in forest ecosystems. Forest biomass is in increasing demand for energy production, and organic matter has been considered as a potential supply. Thus, an important management question is how much organic matter should be retained after forest harvesting to maintain forest productivity. To address this question, an experimental trial was established in 1996 to evaluate the responses of lodgepole pine seedling growth to organic matter loading treatments. Four organic matter loading treatments were randomly assigned to each of four homogeneous pine sites: removal of all organic matter on the forest floor, organic matter loading quantity similar to whole-tree-harvesting residuals left on site, organic matter loading quantity similar to stem-only-harvesting residuals, and organic matter loading quantity more similar to what would be found in disease- or insect-killed stands. Our 10-year data showed that height and diameter had 29 and 35 % increase, respectively, comparing the treatment with the most organic matter loading to the treatment with the least organic matter loading. The positive response of seedling growth to organic matter loading may be associated with nutrients and/or microclimate change caused by organic matter, and requires further study. The dynamic response of seedling growth to organic matter loading treatments highlights the importance of long-term studies. Implications of those results on organic matter management are discussed in the context of forest productivity sustainability.

  14. From microbial biomass compounds to non-living soil organic matter - Microbial biomass as a significant source for soil organic matter formation

    NASA Astrophysics Data System (ADS)

    Miltner, A.; Kindler, R.; Hoffmann-Jäniche, C.; Schmidt-Brücken, B.; Kästner, M.

    2009-04-01

    Soil organic matter is one of the most important pools of the global carbon cycle. Recently, it has been suggested that microbial biomass is a significant source for the formation of refractory organic matter. We tested the relevance of this source by incubation of soil with 13C-labeled Escherichia coli cells. We traced the labeled carbon in fatty acids and amino acids, both in the microbial biomass and in the bulk soil. We also localized cells and their debris by scanning electron microscopy. Although we could not detect any living cells after 100 days, about 50% of the carbon remained in the soil after 224 days. The amount of label in the fatty acids indicated that microbial lipids were degraded faster than the bulk microbial biomass. Their labeling pattern showed that they were redistributed from E. coli to the microbial food web and from the living biomass to non-living soil organic matter. In contrast, the label in the total amino acids did not decrease significantly during incubation. Proteins are thus surprisingly stable in soil, but they also shifted from microbial biomass to non-living soil organic matter. The scanning electron micrographs showed only isolated intact microbial cells in our soil, but patches of organic material of unknown origin which are about 20 - 50 nm2 in size were quite abundant. Dying microbial cells therefore are a significant carbon source for the formation of refractory organic material, but the morphology of the cells changes during degradation, as cell structures cannot be found frequently in soils.

  15. Analysis of organic refractory residues coming from the heating of cometary ice analogs: an insight in complex cometary chemistry

    NASA Astrophysics Data System (ADS)

    Danger, Grégoire; Abou Mrad, Ninette; Fresnau, Aurelien; Duvernay, Fabrice; Chiavassa, Thierry

    2015-04-01

    This contribution focuses on one aspect of our work, which relate to the analysis of refractory residues formed from UV irradiation and warming of astrophysical ice analogs, the RAHIIA project. The understanding of the formation of refractory residues, commonly called "Yellow Stuff" is an important step to establish what kind of organic matter could be available within interplanetary objects such as comets or asteroids. We present here the first results obtained by spectrometric analysis with high resolution mass spectroscopy (LT-Orbitrap) of these residues. These analyzes show that these residues are composed of thousands of molecules of high molecular weight (m / z> 4000), and present an average elemental composition H/C= 1.6, N/C= 0.4, O/C= 0.4 for an initial ice containing H2O:CH3OH:NH3 3:1:1. We further develop specific data representation in order to obtain information on the residue composition. These representations allow to define that three different groups of molecules are present in these residues, molecules bearing only CHN, CHO or CHNO atoms. These representations also give important information on the family composition of each molecular group. All these developments will be used for the comparison of various residues as well as for the development of more specific analytical methods such as UHPLC-MS or GC-MS. In conclusion, these results demonstrate that from only three simple molecules CH3OH, H2O and NH3, a complex chemistry occurs when these molecules are subjected to physical processes available in cometary environments.

  16. HEALTH ASSESSMENT DOCUMENT FOR POLYCYCLIC ORGANIC MATTER

    EPA Science Inventory

    The document responds to Section 122 of the Clean Air Act as Amended August 1977, which requires the Administrator to decide whether atmospheric emissions of polycyclic organic matter (POM) potentially endanger public health. This document reviews POM data on chemical and physica...

  17. Organic matter of urban soils: A review

    NASA Astrophysics Data System (ADS)

    Vodyanitskii, Yu. N.

    2015-08-01

    Urban environment exerts an ambiguous effect on the organic pool of soils; it may decrease (as compared to the background values) in some parts of a city and increase in other parts. The organic matter accumulation in urban soils is promoted by the input of aerial organic pollutants; slowed down mineralization of plant residues under the influence of contamination; and increased productivity of the plants owing to elevated temperatures, high content of carbon dioxide in the air, and maintenance of green zones (sodding of vast areas in cities, application of peat, irrigation and drainage of soils.)

  18. Organic matters: investigating the sources, transport, and fate of organic matter in Fanno Creek, Oregon

    USGS Publications Warehouse

    Sobieszczyk, Steven; Keith, Mackenzie; Goldman, Jami H.; Rounds, Stewart A.

    2015-01-01

    The U.S. Geological Survey (USGS), in cooperation with Clean Water Services, recently completed an investigation into the sources, transport, and fate of organic matter in the Fanno Creek watershed. The information provided by this investigation will help resource managers to implement strategies aimed at decreasing the excess supply of organic matter that contributes to low dissolved-oxygen levels in Fanno Creek and downstream in the Tualatin River during summer. This fact sheet summarizes the findings of the investigation.

  19. Organic matter and sandstone-type uranium deposits: a primer

    USGS Publications Warehouse

    Leventhal, Joel S.

    1979-01-01

    Organic material is intimately associated with sandstone-type uranium deposits in the western United States.. This report gives details of the types of organic matter and their possible role in producing a uranium deposit. These steps include mobilization of uranium from igneous rocks, transportation from the surface, concentration by organic matter, reduction by organic matter, and preservation of the uranium deposit.

  20. Analysis of Organic matter from cloud particles

    NASA Astrophysics Data System (ADS)

    Bank, Shelton; Castillo, Raymond

    1987-03-01

    Organic matter collected from filtration of two separate cloud events was analysed by Fourier Transform Infrared Spectroscopy. Particles collected from different size filters were separated by color and each type of particle gave rise to a characteristic spectrum. The major constituents were identified as complex proteins and cellulose. Additionally, some degraded material (likely protein) and an unidentified orange-brown material were present. Finally some trace components were identified as wax, oil, silicon oil, polyvinyl chloride, calcium carbonate, clay, sand and polyethylene.

  1. Isotopic analysis of cometary organic matter

    NASA Technical Reports Server (NTRS)

    Kerridge, John F.

    1991-01-01

    Carbon isotope ratios have been measured for CN in the coma of Comet Halley and for several CHON particles emitted by Halley. Of these, only the CHON-particle data may be reasonably related to organic matter in the cometary nucleus, but the true range of (C-13)/(C-12) values in those particles is quite uncertain. The D/H ratio in H2O in the Halley coma resembles that in Titan/Uranus.

  2. Organic matter matters for ice nuclei of agricultural soil origin

    NASA Astrophysics Data System (ADS)

    Tobo, Y.; DeMott, P. J.; Hill, T. C. J.; Prenni, A. J.; Swoboda-Colberg, N. G.; Franc, G. D.; Kreidenweis, S. M.

    2014-04-01

    Heterogeneous ice nucleation is a~crucial process for forming ice-containing clouds and subsequent ice-induced precipitation. The importance for ice nucleation of airborne desert soil dusts composed predominantly of minerals is relatively well understood. On the other hand, the potential influence of agricultural soil dusts on ice nucleation has been poorly recognized, despite recent estimates that they may account for up to ∼25% of the global atmospheric dust load. We have conducted freezing experiments with various dusts, including agricultural soil dusts derived from the largest dust source region in North America. Here we show evidence for the significant role of soil organic matter (SOM) in particles acting as ice nuclei (IN) under mixed-phase cloud conditions. We find that the ice nucleating ability of the agricultural soil dusts is similar to that of desert soil dusts, but is reduced to almost the same level as that of clay minerals (e.g., kaolinite) after either H2O2 digestion or dry heating to 300 °C. In addition, based on chemical composition analysis, we show that organic-rich particles are more important than mineral particles for the ice nucleating ability of the agricultural soil dusts at temperatures warmer than about -36 °C. Finally, we suggest that such organic-rich particles of agricultural origin (namely, SOM particles) may contribute significantly to the ubiquity of organic-rich IN in the global atmosphere.

  3. Organic matter matters for ice nuclei of agricultural soil origin

    NASA Astrophysics Data System (ADS)

    Tobo, Y.; DeMott, P. J.; Hill, T. C. J.; Prenni, A. J.; Swoboda-Colberg, N. G.; Franc, G. D.; Kreidenweis, S. M.

    2014-08-01

    Heterogeneous ice nucleation is a crucial process for forming ice-containing clouds and subsequent ice-induced precipitation. The importance for ice nucleation by airborne desert soil dusts composed predominantly of minerals is widely acknowledged. However, the potential influence of agricultural soil dusts on ice nucleation has been poorly recognized, despite recent estimates that they may account for up to 20-25% of the global atmospheric dust load. We have conducted freezing experiments with various dusts, including agricultural soil dusts derived from the largest dust-source region in North America. Here we show evidence for the significant role of soil organic matter (SOM) in particles acting as ice nuclei (IN) under mixed-phase cloud conditions. We find that the ice-nucleating ability of the agricultural soil dusts is similar to that of desert soil dusts, but is clearly reduced after either H2O2 digestion or dry heating to 300 °C. In addition, based on chemical composition analysis, we demonstrate that organic-rich particles are more important than mineral particles for the ice-nucleating ability of the agricultural soil dusts at temperatures warmer than about -36 °C. Finally, we suggest that such organic-rich particles of agricultural origin (namely, SOM particles) may contribute significantly to the ubiquity of organic-rich IN in the global atmosphere.

  4. Isolation and chemical characterization of dissolved and colloidal organic matter

    USGS Publications Warehouse

    Aiken, G.; Leenheer, J.

    1993-01-01

    Commonly used techniques for the concentration and isolation of organic matter from water, such as preparative chromatography, ultrafiltration and reverse osmosis, and the methods used to analyze the organic matter obtained by these methods are reviewed. The development of methods to obtain organic matter that is associated with fractions of the dissolved organic carbon other than humic substances, such as organic bases, hydrophilic organic acids and colloidal organic matter are discussed. Methods specifically used to study dissolved organic nitrogen and dissolved organic phosphorous are also discussed. -from Authors

  5. Measuring Organic Matter with COSIMA on Board Rosetta

    NASA Astrophysics Data System (ADS)

    Briois, C.; Baklouti, D.; Bardyn, A.; Cottin, H.; Engrand, C.; Fischer, H.; Fray, N.; Godard, M.; Hilchenbach, M.; von Hoerner, H.; Höfner, H.; Hornung, K.; Kissel, J.; Langevin, Y.; Le Roy, L.; Lehto, H.; Lehto, K.; Orthous-Daunay, F. R.; Revillet, C.; Rynö, J.; Schulz, R.; Silen, J. V.; Siljeström, S.; Thirkell, L.

    2014-12-01

    Comets are believed to contain the most pristine material of our Solar System materials and therefore to be a key to understand the origin of the Solar System, and the origin of life. Remote sensing observations have led to the detection of more than twenty simple organic molecules (Bockelée-Morvan et al., 2004; Mumma and Charnley, 2011). Experiments on-board in-situ exploration missions Giotto and Vega and the recent Stardust sample return missions have shown that a significant fraction of the cometary grains consists of organic matter. Spectra showed that both the gaseous (Mitchell et al., 1992) and the solid phase (grains) (Kissel and Krueger, 1987) contained organic molecules with higher masses than those of the molecules detected by remote sensing techniques in the gaseous phase. Some of the grains analyzed in the atmosphere of comet 1P/Halley seem to be essentially made of a mixture of carbon, hydrogen, oxygen and nitrogen (CHON grains, Fomenkova, 1999). Rosetta is an unparalleled opportunity to make a real breakthrough into the nature of cometary matter, both in the gas and in the solid phase. The dust mass spectrometer COSIMA on Rosetta will analyze organic and inorganic phases in the dust. The organic phases may be refractory, but some organics may evaporate with time from the dust and lead to an extended source in the coma. Over the last years, we have prepared the cometary rendezvous by the analysis of various samples with the reference model of COSIMA. We will report on this calibration data set and on the first results of the in-situ analysis of cometary grains as captured, imaged and analyzed by COSIMA. References : Bockelée-Morvan, D., et al. 2004. (Eds.), Comets II. the University of Arizona Press, Tucson, USA, pp. 391-423 ; Fomenkova, M.N., 1999. Space Science Reviews 90, 109-114 ; Kissel, J., Krueger, F.R., 1987. Nature 326, 755-760 ; Mitchell, et al. 1992. Icarus 98, 125-133 ; Mumma, M.J., Charnley, S.B., 2011. Annual Review of Astronomy and

  6. Abiotic Bromination of Soil Organic Matter.

    PubMed

    Leri, Alessandra C; Ravel, Bruce

    2015-11-17

    Biogeochemical transformations of plant-derived soil organic matter (SOM) involve complex abiotic and microbially mediated reactions. One such reaction is halogenation, which occurs naturally in the soil environment and has been associated with enzymatic activity of decomposer organisms. Building on a recent finding that naturally produced organobromine is ubiquitous in SOM, we hypothesized that inorganic bromide could be subject to abiotic oxidations resulting in bromination of SOM. Through lab-based degradation treatments of plant material and soil humus, we have shown that abiotic bromination of particulate organic matter occurs in the presence of a range of inorganic oxidants, including hydrogen peroxide and assorted forms of ferric iron, producing both aliphatic and aromatic forms of organobromine. Bromination of oak and pine litter is limited primarily by bromide concentration. Fresh plant material is more susceptible to bromination than decayed litter and soil humus, due to a labile pool of mainly aliphatic compounds that break down during early stages of SOM formation. As the first evidence of abiotic bromination of particulate SOM, this study identifies a mechanistic source of the natural organobromine in humic substances and the soil organic horizon. Formation of organobromine through oxidative treatments of plant material also provides insights into the relative stability of aromatic and aliphatic components of SOM. PMID:26468620

  7. Soil organic matter composition affected by potato cropping managements

    Technology Transfer Automated Retrieval System (TEKTRAN)

    Organic matter is a small but important soil component. As a heterogeneous mixture of geomolecules and biomolecules, soil organic matter (SOM) can be fractionated into distinct pools with different solubility and lability. Water extractable organic matter (WEOM) fraction is the most labile and mobil...

  8. Dissolved organic matter reduces algal accumulation of methylmercury

    USGS Publications Warehouse

    Luengen, Allison C.; Fisher, Nicholas S.; Bergamaschi, Brian A.

    2012-01-01

    Dissolved organic matter (DOM) significantly decreased accumulation of methylmercury (MeHg) by the diatom Cyclotella meneghiniana in laboratory experiments. Live diatom cells accumulated two to four times more MeHg than dead cells, indicating that accumulation may be partially an energy-requiring process. Methylmercury enrichment in diatoms relative to ambient water was measured by a volume concentration factor (VCF). Without added DOM, the maximum VCF was 32 x 104, and the average VCF (from 10 to 72 h) over all experiments was 12.6 x 104. At very low (1.5 mg/L) added DOM, VCFs dropped by approximately half. At very high (20 mg/L) added DOM, VCFs dropped 10-fold. Presumably, MeHg was bound to a variety of reduced sulfur sites on the DOM, making it unavailable for uptake. Diatoms accumulated significantly more MeHg when exposed to transphilic DOM extracts than hydrophobic ones. However, algal lysate, a labile type of DOM created by resuspending a marine diatom in freshwater, behaved similarly to a refractory DOM isolate from San Francisco Bay. Addition of 67 μM L-cysteine resulted in the largest drop in VCFs, to 0.28 x 104. Although the DOM composition influenced the availability of MeHg to some extent, total DOM concentration was the most important factor in determining algal bioaccumulation of MeHg.

  9. Laboratory Investigations of the Complex Refractory Organic Material Produced from Irradiation of Pluto Ice Analogs

    NASA Technical Reports Server (NTRS)

    Materese, Christopher K.; Cruikshank, Dale P.; Sanford, Scott A.; Imanaka, Hiroshi

    2014-01-01

    Much of Pluto's surface consists of N2 ice with smaller amounts of CH4 and CO ices. Despite the low temperature (approximately 45K), chemistry can be driven in the surface ices by radiation processing such as cosmic ray bombardment. When cosmic rays strike the surface, much of their energy is dispersed in the form of secondary electrons, which in turn drive much of the resulting chemical reactions. Laboratory experiments designed to simulate the conditions on these icy bodies may provide insight into this chemistry. Significant progress has been made in the laboratory toward understanding the smaller, simple compounds produced in the solid phase by radiation processing of (N2, CH4, CO) ices (Bohn et al. 1994; Moore & Hudson 2003; Hodyss et al. 2011; Kim and Kaiser 2012). Recently Materese et al. (2014) used a variety of techniques to better characterize the refractory materials produced from the UV photo-irradiation of N2:CH4:CO ices. However, because Pluto's atmosphere is optically thick to Lyman-alpha UV radiation it is important to re-examine the results using an alternate radiation source. Our latest work has consisted of the analysis of refractory materials produced from the electron bombardment of low temperature N2(-), CH4(-), and CO(-)containing ices (100:1:1). The ice mixture was chosen to be analogous to the known surface ices on Pluto and the radiation source was chosen to mimic the secondary electrons produced by cosmic rays bombardment. The residues were studied using multiple chemical techniques including, infrared (IR) spectroscopy, X-ray absorption near-edge structure (XANES) spectroscopy, and gas chromatography coupled with mass spectrometry (GC-MS). The organic residues produced in these experiments can be seen as an analog for the refractory component of the surface of Pluto, and are compared with the residues previously obtained from UV photo-irradiation. UV and near- IR spectroscopy of the surfaces of Pluto and Charon during the encounter with

  10. Soil organic matter prediction using environmental factors

    NASA Astrophysics Data System (ADS)

    Oueslati, I.; Allamano, P.; Claps, P.; Bonifacio, E.

    2009-04-01

    Organic matter is one of the most important properties affecting soil chemical and physical fertility, but it influences also soil hydrologic parameters. It is easily measured by chemical analyses, but in large scale studies its prediction is desirable. This study aims at predicting the spatial distribution of the soil organic matter concentration (SOM) in forest topsoils in Piedmont (North West Italy) using continuous predictors (in forms of auxiliary maps). As predictors we selected: the digital elevation model (DEM, 50 meter resolution), the mean annual precipitation, the soil dryness index and normal difference vegetation index (NDVI, 1 km resolution). Using the Geographic Information System SAGA, the terrain attributes were computed from the DEM, namely are: elevation, slope, aspect and mean curvature associated with hydrological parameters namely, the compound topographic index (CTI) and stream power index (SPI). From the long term monthly average of NDVI the mean annual value and the coefficient of variation (CV) were also derived. This data set was used to estimate the SOM concentration by regression analysis. To test the relationship between the SOM and the environmental variables, 66 soil profiles were used. Several variables were found to be significantly correlated with SOM concentration: elevation, slope, mean NDVI, CV(NDVI), precipitation and dryness index, with correlation coefficients, r, of the linear regressions ranging from 0.12 to 0.63. However, only precipitation and mean NDVI were retained when a stepwise multiple regression was used. Although these two predictors contribute only partially to explain SOM variability (R2=0.42). The importance of vegetation is clearly depicted by the significant effect of NDVI, while the precipitation may contribute to the explanation in a less direct way because of the complex links between climate and organic matter transformation in soils.

  11. The fate of airborne polycyclic organic matter.

    PubMed Central

    Nielsen, T; Ramdahl, T; Bjørseth, A

    1983-01-01

    Biological tests have shown that a significant part of the mutagenicity of organic extracts of collected airborne particulate matter is not due to polycyclic aromatic hydrocarbons (PAH). It is possible that part of these unknown compounds are transformation products of PAH. This survey focuses on the reaction of PAH in the atmosphere with other copollutants, such as nitrogen oxides, sulfur oxides, ozone and free radicals and their reaction products. Photochemically induced reactions of PAH are also included. The reactivity of particle-associated PAH is discussed in relation to the chemical composition and the physical properties of the carrier. Recommendations for future work are given. PMID:6825615

  12. Mapping Soil Organic Matter with Hyperspectral Imaging

    NASA Astrophysics Data System (ADS)

    Moni, Christophe; Burud, Ingunn; Flø, Andreas; Rasse, Daniel

    2014-05-01

    Soil organic matter (SOM) plays a central role for both food security and the global environment. Soil organic matter is the 'glue' that binds soil particles together, leading to positive effects on soil water and nutrient availability for plant growth and helping to counteract the effects of erosion, runoff, compaction and crusting. Hyperspectral measurements of samples of soil profiles have been conducted with the aim of mapping soil organic matter on a macroscopic scale (millimeters and centimeters). Two soil profiles have been selected from the same experimental site, one from a plot amended with biochar and another one from a control plot, with the specific objective to quantify and map the distribution of biochar in the amended profile. The soil profiles were of size (30 x 10 x 10) cm3 and were scanned with two pushbroomtype hyperspectral cameras, one which is sensitive in the visible wavelength region (400 - 1000 nm) and one in the near infrared region (1000 - 2500 nm). The images from the two detectors were merged together into one full dataset covering the whole wavelength region. Layers of 15 mm were removed from the 10 cm high sample such that a total of 7 hyperspectral images were obtained from the samples. Each layer was analyzed with multivariate statistical techniques in order to map the different components in the soil profile. Moreover, a 3-dimensional visalization of the components through the depth of the sample was also obtained by combining the hyperspectral images from all the layers. Mid-infrared spectroscopy of selected samples of the measured soil profiles was conducted in order to correlate the chemical constituents with the hyperspectral results. The results show that hyperspectral imaging is a fast, non-destructive technique, well suited to characterize soil profiles on a macroscopic scale and hence to map elements and different organic matter quality present in a complete pedon. As such, we were able to map and quantify biochar in our

  13. Characterization of refractory matters in dyeing wastewater during a full-scale Fenton process following pure-oxygen activated sludge treatment.

    PubMed

    Bae, Wookeun; Won, Hosik; Hwang, Byungho; de Toledo, Renata Alves; Chung, Jinwook; Kwon, Kiwook; Shim, Hojae

    2015-04-28

    Refractory pollutants in raw and treated dyeing wastewaters were characterized using fractional molecular weight cut-off, Ultraviolet-vis spectrophotometry, and high-performance liquid chromatography-electrospray ionization-mass spectrometry (HPLC-ESI/MS). Significant organics and color compounds remained after biological (pure-oxygen activated sludge) and chemical (Fenton) treatments at a dyeing wastewater treatment plant (flow rate ∼100,000m(3)/d). HPLC-ESI/MS analysis revealed that some organic compounds disappeared after the biological treatment but reappeared after the chemical oxidation process, and some of that were originally absent in the raw dyeing wastewater was formed after the biological or chemical treatment. It appeared that the Fenton process merely impaired the color-imparting bonds in the dye materials instead of completely degrading them. Nevertheless, this process did significantly reduce the soluble chemical oxygen demand (SCOD, 66%) and color (73%) remaining after initial biological treatment which reduced SCOD by 53% and color by 13% in raw wastewater. Biological treatment decreased the degradable compounds substantially, in such a way that the following Fenton process could effectively remove recalcitrant compounds, making the overall hybrid system more economical. In addition, ferric ion inherent to the Fenton reaction effectively coagulated particulate matters not removed via biological and chemical oxidation. PMID:25682369

  14. Organic Matter in the Outer Solar System

    NASA Technical Reports Server (NTRS)

    Cruiskshank, Dale P.; DeVincenzi, Donald L. (Technical Monitor)

    2000-01-01

    Many solid bodies in the outer Solar System are covered with ices of various compositions, including water, carbon dioxide, methane, nitrogen, and other molecules that are solid at the low temperatures that prevail there. These ices have all been detected by remote sensing observations made with telescopes on Earth, or more recently, spacecraft in orbit (notably Galileo at Jupiter). The data also reveal other solid materials that could be minerals or complex carbon-bearing organic molecules. A study in progress using large ground-based telescopes to acquire infrared spectroscopic data, and laboratory results on the optical properties of complex organic matter, seeks to identify the non-icy materials on several satellites of Saturn, Uranus, and Neptune. The work on the satellites of Saturn is in part preparatory to the Cassini spacecraft investigation of the Saturn system, which will begin in 2004 and extend for four years.

  15. Land-use Effect on Stream Organic Matter Composition in Two Metropolitan Areas in USA

    NASA Astrophysics Data System (ADS)

    Duan, S.; Kaushal, S.; Amon, R. M.; Brinkmeyer, R.

    2011-12-01

    Urbanization is a form of land-use change that is increasing in coastal watersheds and may affect the quantity and quality of organic carbon delivered to streams and coastal ocean. Here, we examine the changes in optical and isotopic characteristics of organic matter in streams (Gwynns Fall and Buffalo Bayou) draining Baltimore and Houston Metropolitan Areas (USA), relative to nearby less affected forested watersheds. A summer longitudinal sampling in Gwynns Fall along a rural-urban gradient showed increases in dissolved organic carbon (DOC) and fluorescent protein to humic ratio but a decrease in specific UV absorption (SUVA). Parallel Factor modeling shows dominance of terrestrial component of DOC, and the ratio of an unknown component to the component of humic substance was high in urban watersheds and it was positively correlated impervious surface cover (an index of urbanization). Incubation experiments with leaves and stream algae suggest origin of decayed leaf leachate of this component. Conversely, DOM in Buffalo Bayou showed higher intensity of protein-like fluorescence, and the intensity increased longitudinal along a rural-urban gradient but decreased from low-flows to a flooding event. The difference in fluorescent organic matter composition between the two streams probably reflected different management of wastewater in watersheds. Surface sediment collected at sites of sub-watersheds of Gwynns Fall showed changes in particle size, elemental and isotopic composition with land use. Sediment incubations showed that higher temperature (due to urban heat island effect) enhanced loss of labile organic matter and release of refractory organic matter into stream water. Release of reactive soluble phosphorus, loss of nitrogen and reduction of sulfate also occurred at high incubating temperatures, along with mineralization of sediment organic matter. Bed sediment collected along Buffalo Bayou displayed a longitudinal decrease in N-15, probably reflecting the

  16. Soil organic matter mineralization in frozen soils

    NASA Astrophysics Data System (ADS)

    Harrysson Drotz, S.; Sparrman, T.; Schleucher, J.; Nilsson, M.; Öquist, M. G.

    2009-12-01

    Boreal forest soils are frozen for a large part of the year and soil organic matter mineralization during this period has been shown to significantly influence the C balance of boreal forest ecosystems. Mineralization proceeds through heterotrophic microbial activity, but the understanding of the environmental controls regulating soil organic matter mineralization under frozen conditions is poor. Through a series of investigations we have addressed this issue in order to elucidate to what extent a range of environmental factors control mineralization processes in frozen soils and also the microbial communities potential to oxidize organic substrates and grow under such conditions. The unfrozen water content in the frozen soils was shown to be an integral control on the temperature response of biogenic CO2 production across the freezing point of bulk soil water. We found that osmotic potential was an important contributor to the total water potential and, hence, the unfrozen water content of frozen soil. From being low and negligible in an unfrozen soil, the osmotic potential was found to contribute up to 70% of the total water potential in frozen soil, greatly influencing the volume of liquid water. The specific factors of how soil organic matter composition affected the unfrozen water content and CO2 production of frozen soil were studied by CP-MAS NMR. We concluded that abundance of aromatics and recalcitrant compounds showed a significant positive correlation with unfrozen water content and these were also the major soil organic fractions that similarly correlated with the microbial CO2 production of the frozen soils. Thus, the hierarchy of environmental factors controlling SOM mineralization changes as soils freeze and environmental controls elucidated from studies of unfrozen systems can not be added on frozen conditions. We have also investigated the potential activity of soil microbial communities under frozen conditions in order to elucidate temperature

  17. Stability of Ferrihydrite and Organic Matter in Ferrihydrite-Organic Matter Associations

    NASA Astrophysics Data System (ADS)

    Eusterhues, K.; Totsche, K. U.

    2015-12-01

    Iron oxides can bind particularly large amounts of organic matter (OM) and seem to be an important control on OM storage in many soils. To better understand the interactions between Fe oxides and OM, we produced ferrihydrite-OM associations by adsorption and coprecipitation in laboratory experiments. Because ferrihydrites are often formed in OM-rich solutions, we assume that coprecipitation is a common process in nature. In contrast to adsorption on pre-existing ferrihydrite surfaces, coprecipitation involves adsorption, occlusion (physical entrapment of OM), formation of Fe-OM complexes, and poisoning of ferrihydrite growth. The reactivity of coprecipitates may therefore differ from ferriydrites with adsorbed OM. Incubation experiments with an inoculum extracted from a Podzol forest-floor were carried out to quantify the mineralization of the adsorbed and coprecipitated organic matter. These experiments showed that the association with ferrihydrite stabilized the associated organic matter, but that differences in the degradability of adsorbed and coprecipitated organic matter were small. We therefore conclude that coprecipitation does not lead to a significant formation of microbial inaccessible organic matter domains. Microbial reduction experiments were performed using Geobacter bremensis. We observed that increasing amounts of associated OM led to decreasing initial reaction rates and a decreasing degree of dissolution. Reduction of coprecipitated ferrihydrites was faster than reduction of ferrihydrites with adsorbed OM. Our data demonstrate that the association with ferrihydrite can effectively stabilize labile polysaccharides. Vice versa, these polysaccharides may protect ferrihydrite from reduction by Geobacter-like bacteria. However, a challenge for future studies will be to link formation and degradation of mineral-organic associations to natural porous systems, that is, to the complex interplay of mass transport and microbial distribution in the

  18. Detection of organic matter in interstellar grains.

    PubMed

    Pendleton, Y J

    1997-06-01

    Star formation and the subsequent evolution of planetary systems occurs in dense molecular clouds, which are comprised, in part, of interstellar dust grains gathered from the diffuse interstellar medium (DISM). Radio observations of the interstellar medium reveal the presence of organic molecules in the gas phase and infrared observational studies provide details concerning the solid-state features in dust grains. In particular, a series of absorption bands have been observed near 3.4 microns (approximately 2940 cm-1) towards bright infrared objects which are seen through large column densities of interstellar dust. Comparisons of organic residues, produced under a variety of laboratory conditions, to the diffuse interstellar medium observations have shown that aliphatic hydrocarbon grains are responsible for the spectral absorption features observed near 3.4 microns (approximately 2940 cm-1). These hydrocarbons appear to carry the -CH2- and -CH3 functional groups in the abundance ratio CH2/CH3 approximately 2.5, and the amount of carbon tied up in this component is greater than 4% of the cosmic carbon available. On a galactic scale, the strength of the 3.4 microns band does not scale linearly with visual extinction, but instead increases more rapidly for objects near the Galactic Center. A similar trend is noted in the strength of the Si-O absorption band near 9.7 microns. The similar behavior of the C-H and Si-O stretching bands suggests that these two components may be coupled, perhaps in the form of grains with silicate cores and refractory organic mantles. The ubiquity of the hydrocarbon features seen in the near infrared near 3.4 microns throughout out Galaxy and in other galaxies demonstrates the widespread availability of such material for incorporation into the many newly forming planetary systems. The similarity of the 3.4 microns features in any organic material with aliphatic hydrocarbons underscores the need for complete astronomical observational

  19. Spectral fingerprinting of soil organic matter composition

    NASA Astrophysics Data System (ADS)

    Cecillon, L.; Certini, G.; Lange, H.; Forte, C.; Strand, L. T.

    2009-04-01

    The determination of soil organic matter (SOM) composition relies on a variety of chemical and physical methods, most of them time consuming and expensive. Hitherto, such methodological limitations have hampered the use of detailed SOM composition in process-based models of SOM dynamics, which usually include only three poorly defined carbon pools. Here we show a novel approach merging both near and mid infrared spectroscopy into a single fingerprint for an expeditious prediction of the molecular composition of organic materials in soil, as inferred from a molecular mixing model (MMM) based on 13C nuclear magnetic resonance (NMR), which describes SOM as a mixture of common biologically derived polymers. Infrared and solid-state 13C NMR spectroscopic measurements were performed on a set of mineral and organic soil samples presenting a wide range of organic carbon content (2 to 500 g kg-1), collected in a boreal heathland (Storgama, Norway). The implementation of the MMM using 13C NMR spectra allowed the calculation of five main biochemical components (carbohydrate, protein, lignin, lipids and black carbon) for each sample. Partial least squares regression models were developed for the five biopolymers using outer product analysis of near and mid infrared spectra (Infrared-OPA). All models reached ratios of performance to deviation (RPD) above 2 and specific infrared wavenumbers associated to each biochemical component were identified. Our results demonstrate that Infrared-OPA provides a robust and cost-effective fingerprint of SOM composition that could be useful for the routine assessment of soil carbon pools.

  20. Influence of land use on soil organic matter

    NASA Astrophysics Data System (ADS)

    Rogeon, H.; Lemée, L.; Chabbi, A.; Ambles, A.

    2009-04-01

    Soil organic matter (SOM) is actually of great environmental interest as the amount of organic matter stored in soils represents one of the largest reservoirs of organic carbon on the global scale [1]. Indeed, soil carbon storage capacity represents 1500 to 2000 Gt for the first meter depth, which is twice the concentration of atmospheric CO2 [2]. Furthermore, human activities, such as deforestation (which represents a flux of 1.3 Gt C/year), contribute to the increase in atmospheric CO2 concentration for about one percent a year [3]. Therefore, carbon dioxide sequestration in plant and carbon storage in soil and biomass could be considered as a complementary solution against climate change. The stock of carbon in soils is greatly influenced by land use (ca 70 Gt for a forest soil or a grassland against 40 Gt for an arable land). Furthermore the molecular composition of SOM should be also influenced by vegetation. In this context, four horizons taken between 0-120 cm from the same profile of a soil under grassland and forest located in the vicinity of Poitiers (INRA Lusignan, ORE Prairie) were compared. For the surface horizon, the study is improved with the results from the cultivated soil from INRA Versailles. Soil organic matter was characterized using IR spectroscopy, elemental analysis and thermal analysis. Granulometric fractionation into sand (50-2000 μm), silt (2-50 μm) and clay (<2 μm) was conducted. The organic matter associated with the mineral fractions was thus characterized using thermochemolysis coupled with gas chromatography and mass spectrometry (Py-GC/MS). The total lipidic fractions were extracted with CH2Cl2/MeOH using an accelerated solvent extraction (ASE). In the three soils, lipids are concentrated into the superficial horizon (0-30 cm) which indicates a low mobilisation. Lipids from the superficial horizon are more abundant for the arable soil (1010 ppm) than for the two other (400 ppm). Lipids from the forest and the grassland were

  1. Relating dissolved organic matter fluorescence to functional properties

    NASA Astrophysics Data System (ADS)

    Tipping, E.; Baker, A.; Thacker, S.; Gondar, D.

    2007-12-01

    The fluorescence excitation emission matrix properties of dissolved organic matter from three rivers and one lake in NW England are analysed. Sites are sampled in duplicate and for some sites seasonally to cover variations in dissolved organic matter composition, river flow, and carbon isotopic (13C, 14C) variability. Results are compared to the functional properties of the dissolved organic matter, the functional assays provide quantitative information on light absorption, fluorescence, photochemical fading, pH buffering, copper binding, benzo[a]pyrene binding, hydrophilicity and adsorption to alumina. Fluorescence characterization of the dissolved organic matter samples demonstrates that peak C fluorescence emission wavelength, the ratio of peak T to peak C fluorescence intensity, and the fluorescence : absorbance ratio best differentiate different dissolved organic matter samples. These parameters correspond to dissolved organic matter aromaticity, the ratio of labile to recalcitrant organic matter, and dissolved organic matter molecular weight. Peak C fluorescence emission wavelength, the ratio of peak T to peak C fluorescence intensity, and the fluorescence : absorbance ratio fluorescence parameters also have strong correlations with several of the functional assays, in particular the extinction coefficients, benzo(a)pyrene binding and alumina adsorption, and buffering capacity. In many cases, regression equations with a correlation coefficient >0.9 are obtained, suggesting that dissolved organic matter functional character can be predicted from DOM fluorescence properties. For one site, the relationship between dissolved organic matter source, fluorescence, function and carbon isotopic composition is discussed.

  2. Benthic community structure and organic matter variation in response to oceanographic events on the Brazilian SE inner shelf

    NASA Astrophysics Data System (ADS)

    Rodrigues Alves, Betina G.; Ziggiatti Güth, Arthur; Caruso Bícego, Márcia; Airton Gaeta, Salvador; Gomes Sumida, Paulo Yukio

    2014-08-01

    For 13 months, this study monitored the sedimentary organic matter composition, benthic bacteria and macrofauna at a permanent sampling station on the inner shelf (~ 40 m depth) near Ubatuba in SE Brazil. The sedimentary organic matter compounds were evaluated for total organic matter content, lipid biomarkers and phytopigments. The organic matter content varied significantly over time but no clear seasonal trend was evident. Lipid biomarker composition revealed that particulate organic matter was primarily derived from autochthonous sources, such as diatoms, other microalgae, zooplankton, sediment bacteria and benthic metazoan fauna. Phytopigment results revealed that the majority of the organic matter in the sediments was refractory as opposed to labile, suggesting that the labile portion is rapidly consumed. The benthic dynamics off the coast of Ubatuba is highly influenced by the intrusion of the South Atlantic Central Water (SACW) onto the shelf, which brings nutrients up to the euphotic zone and stimulates new phytoplanktonic production. This enhances the flux of organic matter to the bottom and increases benthic biota density, mainly bacteria. These results suggest a strong and complex benthic-pelagic coupling that is influenced by both mesoscale oceanographic events (i.e., intrusion of SACW) and local events (cold fronts) through remobilization of the sediments.

  3. Simultaneous degradation of toxic refractory organic pesticide and bioelectricity generation using a soil microbial fuel cell.

    PubMed

    Cao, Xian; Song, Hai-liang; Yu, Chun-yan; Li, Xian-ning

    2015-01-01

    In this study, the soil microbial fuel cells (MFCs) were constructed in the topsoil contaminated with toxic refractory organic pesticide, hexachlorobenzene (HCB). The performance of electricity generation and HCB degradation in the soil-MFCs were investigated. The HCB degradation pathway was analyzed based on the determination of degradation products and intermediates. Experimental results showed that the HCB removal efficiencies in the three groups (soil MFCs group, open circuit control group and no adding anaerobic sludge blank group) were 71.15%, 52.49% and 38.92%, respectively. The highest detected power density was 77.5 mW/m(2) at the external resistance of 1000 Ω. HCB was degraded via the reductive dechlorination pathway in the soil MFC under anaerobic condition. The existence of the anode promoted electrogenic bacteria to provide more electrons to increase the metabolic reactions rates of anaerobic bacteria was the main way which could promote the removal efficiencies of HCB in soil MFC. PMID:25864035

  4. Adsorption into mineral mesopores as a stabilization mechanism for organic matter on aluminosilicates

    SciTech Connect

    Mayer, L.M. . Dept. of Oceanography)

    1992-01-01

    Measurements of mineral specific surface area and total organic carbon (TOC) indicate that many marine shelf and estuarine sediments, and aluminosilicate soils, have a TOC content equivalent to a monolayer of organic matter covering all mineral surfaces. Density separations of discrete organic particulates from mineral-associated OC are consistent with a primarily adsorbed nature foremost of TOC. Nitrogen gas adsorption data also suggest extensive organic coatings on the mineral grains. Downcore analyses indicate that sediments with TOC starting in excess of monolayer-equivalent (ME) levels decay with core depth to the ME level and then markedly slow their OC loss rate--i.e., the ME level determines the refractory background concentration of TOC. Pore size distributions of marine sediments, determined by nitrogen adsorption or mercury porosimetry, indicate that most surface area of minerals is to be found in pores of < 10 nm diameter. These observations lead to the hypothesis that organic matter is stabilized on aluminosilicate minerals by adsorption into pores too small to allow entry or functioning of the hydrolytic enzymes responsible for OC degradation. This hypothesis is consistent with, but does not require, humification reactions as necessary for OC stabilization. The ME levels of TOC found in continental platform aluminosilicates hence represent a cap on the amount of organic matter that can be protected in this manner and thus attain a residence time of > 1,000 y. Stabilization of higher levels of TOC, as in acid soils or anoxic sediments, presumably results from protection by different mechanisms.

  5. Potential Marine Organisms Affecting Airborne Primary Organic Matter

    NASA Astrophysics Data System (ADS)

    Aller, J. Y.; Alpert, P. A.; Knopf, D. A.

    2012-12-01

    The oceans cover 70% of earth with the marine environment contributing ~50% of the global biomass. Particularly during periods of high biological activity associated with phytoplankton blooms, primary emitted aerosol particles dominated by organic compounds in the submicron size range, are ejected from surface waters increasing in concentration exponentially with overlying wind speeds. This is significant for clouds and climate particularly over nutrient rich polar seas, where seawater concentrations of biogenic particles can reach 109 cells per ml during spring phytoplankton blooms, and even 106 cells per ml in winter when empty frustules and fragments of diatoms are resuspensed from shallow shelf sediments by strong winds, and mix with living pico- and nanoplankton in surface sea waters. This organic aerosol fraction can have a significant impact on the ability of ocean derived aerosol to act as cloud condensation nuclei. It has been shown that small insoluble organic particles are aerosolized from the sea surface microlayer (SML) via bubble bursting. The exact composition and complexity of the SML varies spatially and temporally but includes phytoplankton cells, microorganisms, organic debris, and a complex mixture of proteins, polysaccharides, humic-type material and waxes, microgels and colloidal nanogels, and strong surface active lipids. The specific chemical composition is dependent on the fractionation of organic matter which originates from in-situ production, from underlying water and even from atmospheric deposition. These conditions will most likely determine the nature of the organic and biogenic material. Here we review the types, sizes, and properties of ocean-derived particles and organic material which present potential candidates for airborne biogenic and organic particles.

  6. Removal of refractory organics in nanofiltration concentrates of municipal solid waste leachate treatment plants by combined Fenton oxidative-coagulation with photo--Fenton processes.

    PubMed

    Li, Jiuyi; Zhao, Lei; Qin, Lele; Tian, Xiujun; Wang, Aimin; Zhou, Yanmei; Meng, Liao; Chen, Yong

    2016-03-01

    Removal of the refractory organic matters in leachate brines generated from nanofiltration unit in two full-scale municipal solid waste landfill leachate treatment plants was investigated by Fenton oxidative-coagulation and ultraviolet photo - Fenton processes in this study. Fenton oxidative-coagulation was performed under the condition of an initial pH of 5.0 and low H2O2/Fe(2+) ratios. After precipitate separation, the remaining organic constituents were further oxidized by photo - Fenton process. For both leachate brines with varying pollution strength, more than 90% COD and TOC reductions were achieved at H2O2/Fe(2+) dosages of 35 mM/8 mM and 90 mM/10 mM, respectively. The effluent COD ranged 120-160 mg/L under the optimal operating conditions, and the biodegradability was increased significantly. Fenton oxidative-coagulation was demonstrated to contribute nearly 70% overall removal of organic matters. In the combined processes, the efficiency of hydrogen peroxide varied from 216 to 228%, which may significantly reduce the operating cost of conventional Fenton method. Six phthalic acid esters and thirteen polycyclic aromatic hydrocarbons were found in leachate brines, and, on the average, around 80% phthalic acid esters and 90% polycyclic aromatic hydrocarbons were removed by the combined treatments. PMID:26741550

  7. Water repellency and organic matter composition after a wildfire: new insights using thermal analysis

    NASA Astrophysics Data System (ADS)

    Neris, Jonay; Doerr, Stefan

    2014-05-01

    Water repellency, a key parameter in the hydrological and ecological behaviour of ecosystems, is one of the main soil properties affected by wildfire through its impact on organic matter (Shakesby and Doerr, 2006). This study examines the link between post-fire organic matter quantity and composition, soil water repellency and related hydrological properties in order to (i) examine the influence of different organic matter pools on soil hydrological properties and (ii) to explore the use of these links as a proxy for soil hydrological impacts of fire. Soil samples from five fire-affected burned and unburned control sites in Andisols terrain in Tenerife, previously studied for water repellency and hydrology-related properties (Neris et al., 2013), were selected and thermogravimetric analysis (TG) carried out to evaluate fire impacts on their organic matter composition. A decrease in the organic matter quantity as well as in the relative amount of the labile organic matter pool and an increase in the recalcitrant and/or refractory pool depending was observed in the burned soils. TG data, using 10 ºC temperature range steps, allowed reasonable prediction of soil properties evaluated, with R2 ranging from 0.4 to 0.8. The labile pool showed a broad and positive influence on most soil properties evaluated, whereas the refractory pool and the dehydration range affected the surface water holding capacity and water repellency. These results, in conjunction with the simplicity of the TG analysis suggest that, following a calibration step to link TG data to the site-specific post-fire soil properties, this method may be a useful tool for rapid and cost-effective soil hydrological response evaluation after the fire. References Neris, J., Tejedor, M., Fuentes, J., Jiménez, C., 2013. Infiltration, runoff and soil loss in Andisols affected by forest fire (Canary Islands, Spain). Hydrological Processes 27(19), 2814-2824. Shakesby, R.A., Doerr, S.H., 2006. Wildfire as a

  8. Origin of organic matter in the protosolar nebula and in comets

    NASA Technical Reports Server (NTRS)

    Greenberg, J. M.; Shalabiea, O. M.; Mendoza-Gomez, C. X.; Schutte, W.; Gerakines, P. A.

    1994-01-01

    Comet organics are traced to their origin in interstellar space. Possible sources of comet organics from solar nebula chemistry are briefly discussed. The infrared spectra of interstellar dust are compared with spectra of solar (space) irradiated laboratory organic residues and with meteorites. The spectra compare very favorably. The atomic composition of first generation laboratory organic residues compares favorably with that of comet Halley organics if divided into approrpriate 'volatile' (less refreactory) and 'refractory' (more refractory) complex organics.

  9. Sensitivity of soil organic matter in anthropogenically disturbed organic soils

    NASA Astrophysics Data System (ADS)

    Säurich, Annelie; Tiemeyer, Bärbel; Bechtold, Michel; Don, Axel; Freibauer, Annette

    2016-04-01

    Drained peatlands are hotspots of carbon dioxide (CO2) emissions from agriculture. However, the variability of CO2 emissions increases with disturbance, and little is known on the soil properties causing differences between seemingly similar sites. Furthermore the driving factors for carbon cycling are well studied for both genuine peat and mineral soil, but there is a lack of information concerning soils at the boundary between organic and mineral soils. Examples for such soils are both soils naturally relatively high in soil organic matter (SOM) such as Humic Gleysols and former peat soils with a relative low SOM content due to intensive mineralization or mixing with underlying or applied mineral soil. The study aims to identify drivers for the sensitivity of soil organic matter and therefore for respiration rates of anthropogenically disturbed organic soils, especially those near the boundary to mineral soils. Furthermore, we would like to answer the question whether there are any critical thresholds of soil organic carbon (SOC) concentrations beyond which the carbon-specific respiration rates change. The German agricultural soil inventory samples all agricultural soils in Germany in an 8x8 km² grid following standardized protocols. From this data and sample base, we selected 120 different soil samples from more than 80 sites. As reference sites, three anthropogenically undisturbed peatlands were sampled as well. We chose samples from the soil inventory a) 72 g kg-1 SOC and b) representing the whole range of basic soil properties: SOC (72 to 568 g kg-1), total nitrogen (2 to 29 g kg-1), C-N-ratio (10 to 80) bulk density (0.06 to 1.41 g/cm³), pH (2.5 to 7.4), sand (0 to 95 %) and clay (2 to 70 %) content (only determined for samples with less than 190 g kg-1 SOC) as well as the botanical origin of the peat (if determinable). Additionally, iron oxides were determined for all samples. All samples were sieved (2 mm) and incubated at standardized water content and

  10. Soil Organic Matter and Management of Plant-Parasitic Nematodes

    PubMed Central

    Widmer, T. L.; Mitkowski, N. A.; Abawi, G. S.

    2002-01-01

    Organic matter and its replenishment has become a major component of soil health management programs. Many of the soil's physical, chemical, and biological properties are a function of organic matter content and quality. Adding organic matter to soil influences diverse and important biological activities. The diversity and number of free-living and plant-parasitic nematodes are altered by rotational crops, cover crops, green manures, and other sources of organic matter. Soil management programs should include the use of the proper organic materials to improve soil chemical, physical, and biological parameters and to suppress plant-parasitic nematodes and soilborne pathogens. It is critical to monitor the effects of organic matter additions on activities of major and minor plant-parasitic nematodes in the production system. This paper presents a general review of information in the literature on the effects of crop rotation, cover crops, and green manures on nematodes and their damage to economic crops. PMID:19265946

  11. Soil organic matter and management of plant-parasitic nematodes.

    PubMed

    Widmer, T L; Mitkowski, N A; Abawi, G S

    2002-12-01

    Organic matter and its replenishment has become a major component of soil health management programs. Many of the soil's physical, chemical, and biological properties are a function of organic matter content and quality. Adding organic matter to soil influences diverse and important biological activities. The diversity and number of free-living and plant-parasitic nematodes are altered by rotational crops, cover crops, green manures, and other sources of organic matter. Soil management programs should include the use of the proper organic materials to improve soil chemical, physical, and biological parameters and to suppress plant-parasitic nematodes and soilborne pathogens. It is critical to monitor the effects of organic matter additions on activities of major and minor plant-parasitic nematodes in the production system. This paper presents a general review of information in the literature on the effects of crop rotation, cover crops, and green manures on nematodes and their damage to economic crops. PMID:19265946

  12. Aerobic methane production from organic matter

    NASA Astrophysics Data System (ADS)

    Vigano, I.

    2010-01-01

    Methane, together with H2O, CO2 and N2O, is an important greenhouse gas in th e Earth’s atmosphere playing a key role in the radiative budget. It has be en known for decades that the production of the reduced compound CH4 is possible almost exclusively in anoxic environments per opera of one of the most importan t class of microorganisms which form the Archaea reign. Methane can be produced also from incomplete combustion of organic material. The generation of CH4 in an oxygenated environment under near-ambient conditions is a new discovery made in 2006 by Keppler et. al where surprisingly they measured emissions of this green house gas from plants incubated in chambers with air containing 20% of oxygen. A lthough the estimates on a global scale are still object of an intensive debate, the results presented in this thesis clearly show the existence of methane prod uction under oxic conditions for non living plant material. Temperature and UV l ight are key factors that drive the generation of CH4 from plant matter in a wel l oxygenated environment.

  13. The evolution of organic matter in space.

    PubMed

    Ehrenfreund, Pascale; Spaans, Marco; Holm, Nils G

    2011-02-13

    Carbon, and molecules made from it, have already been observed in the early Universe. During cosmic time, many galaxies undergo intense periods of star formation, during which heavy elements like carbon, oxygen, nitrogen, silicon and iron are produced. Also, many complex molecules, from carbon monoxide to polycyclic aromatic hydrocarbons, are detected in these systems, like they are for our own Galaxy. Interstellar molecular clouds and circumstellar envelopes are factories of complex molecular synthesis. A surprisingly high number of molecules that are used in contemporary biochemistry on the Earth are found in the interstellar medium, planetary atmospheres and surfaces, comets, asteroids and meteorites and interplanetary dust particles. Large quantities of extra-terrestrial material were delivered via comets and asteroids to young planetary surfaces during the heavy bombardment phase. Monitoring the formation and evolution of organic matter in space is crucial in order to determine the prebiotic reservoirs available to the early Earth. It is equally important to reveal abiotic routes to prebiotic molecules in the Earth environments. Materials from both carbon sources (extra-terrestrial and endogenous) may have contributed to biochemical pathways on the Earth leading to life's origin. The research avenues discussed also guide us to extend our knowledge to other habitable worlds. PMID:21220279

  14. The Reincarnation of Interstellar Dust: The Importance of Organic Refractory Material in Infrared Spectra of Cometary Comae and Circumstellar Disks

    NASA Astrophysics Data System (ADS)

    Kimura, Hiroshi

    2013-09-01

    We consider the reincarnation of interstellar dust to be reborn in protoplanetary disks as aggregates consisting of submicron-sized grains with a crystalline or amorphous silicate core and an organic-rich carbonaceous mantle. We find that infrared spectra of reincarnated interstellar dust reproduce emission peaks at correct wavelengths where the peaks were observed in cometary comae, debris disks, and protoplanetary disks if the volume fraction of organic refractory meets the constraints on elemental abundances. We discuss what we can learn from the infrared spectra of reincarnated interstellar dust in cometary comae and circumstellar disks.

  15. THE REINCARNATION OF INTERSTELLAR DUST: THE IMPORTANCE OF ORGANIC REFRACTORY MATERIAL IN INFRARED SPECTRA OF COMETARY COMAE AND CIRCUMSTELLAR DISKS

    SciTech Connect

    Kimura, Hiroshi

    2013-09-20

    We consider the reincarnation of interstellar dust to be reborn in protoplanetary disks as aggregates consisting of submicron-sized grains with a crystalline or amorphous silicate core and an organic-rich carbonaceous mantle. We find that infrared spectra of reincarnated interstellar dust reproduce emission peaks at correct wavelengths where the peaks were observed in cometary comae, debris disks, and protoplanetary disks if the volume fraction of organic refractory meets the constraints on elemental abundances. We discuss what we can learn from the infrared spectra of reincarnated interstellar dust in cometary comae and circumstellar disks.

  16. TILLAGE AND RESIDUE MANAGEMENT EFFECTS ON SOIL ORGANIC MATTER

    Technology Transfer Automated Retrieval System (TEKTRAN)

    This college-level textbook is designed to help students and researchers understand the complexity of how to manage soil organic matter in a diversity of agroecosystems. This chapter describes the current state of knowledge on how tillage and residue management affect soil organic matter. Types of t...

  17. Complexation of trace metals by adsorbed natural organic matter

    USGS Publications Warehouse

    Davis, J.A.

    1984-01-01

    The adsorption behavior and solution speciation of Cu(II) and Cd(II) were studied in model systems containing colloidal alumina particles and dissolved natural organic matter. At equilibrium a significant fraction of the alumina surface was covered by adsorbed organic matter. Cu(II) was partitioned primarily between the surface-bound organic matter and dissolved Cu-organic complexes in the aqueous phase. Complexation of Cu2+ with the functional groups of adsorbed organic matter was stronger than complexation with uncovered alumina surface hydroxyls. It is shown that the complexation of Cu(II) by adsorbed organic matter can be described by an apparent stability constant approximately equal to the value found for solution phase equilibria. In contrast, Cd(II) adsorption was not significantly affected by the presence of organic matter at the surface, due to weak complex formation with the organic ligands. The results demonstrate that general models of trace element partitioning in natural waters must consider the presence of adsorbed organic matter. ?? 1984.

  18. Kinetics of desorption of organic compounds from dissolved organic matter.

    PubMed

    Kopinke, Frank-Dieter; Ramus, Ksenia; Poerschmann, Juergen; Georgi, Anett

    2011-12-01

    This study presents a new experimental technique for measuring rates of desorption of organic compounds from dissolved organic matter (DOM) such as humic substances. The method is based on a fast solid-phase extraction of the freely dissolved fraction of a solute when the solution is flushed through a polymer-coated capillary. The extraction interferes with the solute-DOM sorption equilibrium and drives the desorption process. Solutes which remain sorbed to DOM pass through the extraction capillary and can be analyzed afterward. This technique allows a time resolution for the desorption kinetics from subseconds up to minutes. It is applicable to the study of interaction kinetics between a wide variety of hydrophobic solutes and polyelectrolytes. Due to its simplicity it is accessible for many environmental laboratories. The time-resolved in-tube solid-phase microextraction (TR-IT-SPME) was applied to two humic acids and a surfactant as sorbents together with pyrene, phenanthrene and 1,2-dimethylcyclohexane as solutes. The results give evidence for a two-phase desorption kinetics: a fast desorption step with a half-life of less than 1 s and a slow desorption step with a half-life of more than 1 min. For aliphatic solutes, the fast-desorbing fraction largely dominates, whereas for polycyclic aromatic hydrocarbons such as pyrene, the slowly desorbing, stronger-bound fraction is also important. PMID:22035249

  19. Influence of sediment-organic matter quality on growth and polychlorobiphenyl bioavailability in Echinodermata (Amphiura filiformis)

    SciTech Connect

    Gunnarsson, J.S.; Granberg, M.E.; Nilsson, H.C.; Rosenberg, R.; Hellman, B.

    1999-07-01

    Sediment total organic carbon (TOC) content is considered to be a primary food source for benthic invertebrates and a major factor influencing the partitioning and bioavailability of sediment-associated organic contaminants. Most studies report that both toxicity and uptake of sediment-associated contaminants by benthic organisms are inversely proportional to sediment TOC content. The aim of this study was to determine the importance of the TOC quality for the bioavailability of sediment-associated organic contaminants and the growth of benthic macrofauna. The common infaunal brittle star Amphiura filiformis was exposed to a base sediment covered by a {sup 14}C-polychlorobipenyl (3,3{prime}4,4{prime}-{sup 14}C-tetrachlorobiphenyl (TCB)) contaminated top layer (0--2 cm), enriched to the same TOC content with 31 g TOC/m{sup 2} of different quality and origin. The following carbon sources, ranging from labile to refractory, were used: (1) green macroalga (Ulva lactuca), (2) brown macroalga (Ascophyllum nodosum), (3) eelgrass (Zostera Marina), (4) phytoplankton (Ceratium spp.), and (5) lignins of terrestrial origin. Characterization of the organic matter quality was accomplished by measuring the content of amino acids, lipids, C, N, and polyphenolic compounds. The reactivity of the sedimentary organic matter was assessed by means of respiration and dissolved inorganic nitrogen flux measurements. The experiment was carried out in 1-L glass jars, each containing four brittle stars and the contaminated and enriched sediment. The jars were circulated in a flow-through mode with filtered seawater. Somatic growth (regeneration of a precut arm) and bioaccumulation of {sup 14}C-TCB were measured at 10 sampling occasions during 48 d of exposure. Growth rates, TCB uptake rates, and steady-state concentrations differed significantly between treatments and were correlated to the qualities of the organic substrates. The greatest TCB accumulation and growth were observed in

  20. Subcritical water extraction of organic matter from sedimentary rocks.

    PubMed

    Luong, Duy; Sephton, Mark A; Watson, Jonathan S

    2015-06-16

    Subcritical water extraction of organic matter containing sedimentary rocks at 300°C and 1500 psi produces extracts comparable to conventional solvent extraction. Subcritical water extraction of previously solvent extracted samples confirms that high molecular weight organic matter (kerogen) degradation is not occurring and that only low molecular weight organic matter (free compounds) are being accessed in analogy to solvent extraction procedures. The sedimentary rocks chosen for extraction span the classic geochemical organic matter types. A type I organic matter-containing sedimentary rock produces n-alkanes and isoprenoidal hydrocarbons at 300°C and 1500 psi that indicate an algal source for the organic matter. Extraction of a rock containing type II organic matter at the same temperature and pressure produces aliphatic hydrocarbons but also aromatic compounds reflecting the increased contributions from terrestrial organic matter in this sample. A type III organic matter-containing sample produces a range of non-polar and polar compounds including polycyclic aromatic hydrocarbons and oxygenated aromatic compounds at 300°C and 1500 psi reflecting a dominantly terrestrial origin for the organic materials. Although extraction at 300°C and 1500 psi produces extracts that are comparable to solvent extraction, lower temperature steps display differences related to organic solubility. The type I organic matter produces no products below 300°C and 1500 psi, reflecting its dominantly aliphatic character, while type II and type III organic matter contribute some polar components to the lower temperature steps, reflecting the chemical heterogeneity of their organic inventory. The separation of polar and non-polar organic compounds by using different temperatures provides the potential for selective extraction that may obviate the need for subsequent preparative chromatography steps. Our results indicate that subcritical water extraction can act as a suitable

  1. Dissolved Organic Matter and Emerging Contaminants in Urban Stream Ecosystems

    NASA Astrophysics Data System (ADS)

    Kaushal, S. S.; Findlay, S.; Groffman, P.; Belt, K.; Delaney, K.; Sides, A.; Walbridge, M.; Mayer, P.

    2009-05-01

    We investigated the effects of urbanization on the sources, bioavailability and forms of natural and anthropogenic organic matter found in streams located in Maryland, U.S.A. We found that the abundance, biaoavailability, and enzymatic breakdown of dissolved organic carbon (DOC), dissolved organic nitrogen (DON), and dissolved organic phosphorus (DOP) increased in streams with increasing watershed urbanization suggesting that organic nutrients may represent a growing form of nutrient loading to coastal waters associated with land use change. Organic carbon, nitrogen, and phosphorus in urban streams were elevated several-fold compared to forest and agricultural streams. Enzymatic activities of stream microbes in organic matter decomposition were also significantly altered across watershed land use. Chemical characterization suggested that organic matter in urban streams originated from a variety of sources including terrestrial, sewage, and in-stream transformation. In addition, a characterization of emerging organic contaminants (polyaromatic cyclic hydrocarbons, organochlorine pesticides, and polybrominated diphenyl ether flame retardents), showed that organic contaminants and dissolved organic matter increase with watershed urbanization and fluctuate substantially with changing climatic conditions. Elucidating the emerging influence of urbanization on sources, transport, and in-stream transformation of organic nutrients and contaminants will be critical in unraveling the changing role of organic matter in urban degraded and restored stream ecosystems.

  2. Changes in River Organic Matter Through Time.

    NASA Astrophysics Data System (ADS)

    Hudson, N.; Baker, A.; Ward, D.

    2006-12-01

    fluorescence, as an increase in pH was also observed in these samples. This work illustrates the dynamic character of river organic matter within a timescale and under conditions that are representative of the natural system.

  3. Linking groundwater dissolved organic matter to sedimentary organic matter from a fluvio-lacustrine aquifer at Jianghan Plain, China by EEM-PARAFAC and hydrochemical analyses.

    PubMed

    Huang, Shuang-bing; Wang, Yan-xin; Ma, Teng; Tong, Lei; Wang, Yan-yan; Liu, Chang-rong; Zhao, Long

    2015-10-01

    The sources of dissolved organic matter (DOM) in groundwater are important to groundwater chemistry and quality. This study examined similarities in the nature of DOM and investigated the link between groundwater DOM (GDOM) and sedimentary organic matter (SOM) from a lacustrine-alluvial aquifer at Jianghan Plain. Sediment, groundwater and surface water samples were employed for SOM extraction, optical and/or chemical characterization, and subsequent fluorescence excitation-emission matrix (EEM) and parallel factor analyses (PARAFAC). Spectroscopic properties of bulk DOM pools showed that indices indicative of GDOM (e.g., biological source properties, humification level, aromaticity and molecule mobility) varied within the ranges of those of two extracted end-members of SOM: humic-like materials and microbe-associated materials. The coexistence of PARAFAC compositions and the sustaining internal relationship between GDOM and extracted SOM indicate a similar source. The results from principal component analyses with selected spectroscopic indices showed that GDOM exhibited a transition trend regarding its nature: from refractory high-humification DOM to intermediate humification DOM and then to microbe-associated DOM, with decreasing molecular weight. Correlations of spectroscopic indices with physicochemical parameters of the groundwater suggested that GDOM was released from SOM and was modified by microbial diagenetic processes. The current study demonstrated the associations of GDOM with SOM from a spectroscopic viewpoint and provided new evidence supporting SOM as the source of GDOM. PMID:26005756

  4. Degradation of natural organic matter: A thermodynamic analysis

    NASA Astrophysics Data System (ADS)

    LaRowe, Douglas E.; Van Cappellen, Philippe

    2011-04-01

    The oxidative degradation of organic matter is a key process in the biogeochemical functioning of the earth system. Quantitative models of organic matter degradation are therefore essential for understanding the chemical state and evolution of the Earth's near-surface environment, and to forecast the biogeochemical consequences of ongoing regional and global change. The complex nature of biologically produced organic matter represents a major obstacle to the development of such models, however. Here, we compare the energetics of the oxidative degradation of a large number of naturally occurring organic compounds. By relating the Gibbs energies of half reactions describing the complete mineralization of the compounds to their average nominal carbon oxidation state, it becomes possible to estimate the energetic potential of the compounds based on major element (C, H, N, O, P, S) ratios. The new energetic description of organic matter can be combined with bioenergetic theory to rationalize observed patterns in the decomposition of natural organic matter. For example, the persistence of cell membrane derived compounds and complex organics in anoxic settings is consistent with their limited catabolic potential under these environmental conditions. The proposed approach opens the way to include the thermodynamic properties of organic compounds in kinetic models of organic matter degradation.

  5. Spatial Complexity of Soil Organic Matter Forms at Nanometre Scales

    SciTech Connect

    Lehmann,J.; Solomon, D.; Kinyangi, J.; Dathe, L.; Wirick, S.; Jacobsen, C.

    2008-01-01

    Organic matter in soil has been suggested to be composed of a complex mixture of identifiable biopolymers1 rather than a chemically complex humic material2. Despite the importance of the spatial arrangement of organic matter forms in soil3, its characterization has been hampered by the lack of a method for analysis at fine scales. X-ray spectromicroscopy has enabled the identification of spatial variability of organic matter forms, but was limited to extracted soil particles4 and individual micropores within aggregates5, 6. Here, we use synchrotron-based near-edge X-ray spectromicroscopy7 of thin sections of entire and intact free microaggregates6 to demonstrate that on spatial scales below 50 nm resolution, highly variable yet identifiable organic matter forms, such as plant or microbial biopolymers, can be found in soils at distinct locations of the mineral assemblage. Organic carbon forms detected at this spatial scale had no similarity to organic carbon forms of total soil. In contrast, we find that organic carbon forms of total soil were remarkably similar between soils from several temperate and tropical forests with very distinct vegetation composition and soil mineralogy. Spatial information on soil organic matter forms at the scale provided here could help to identify processes of organic matter cycling in soil, such as carbon stability or sequestration and responses to a changing climate.

  6. Deformation behaviors of peat with influence of organic matter.

    PubMed

    Yang, Min; Liu, Kan

    2016-01-01

    Peat is a kind of special material rich in organic matter. Because of the high content of organic matter, it shows different deformation behaviors from conventional geotechnical materials. Peat grain has a non-negligible compressibility due to the presence of organic matter. Biogas can generate from peat and can be trapped in form of gas bubbles. Considering the natural properties of peat, a special three-phase composition of peat is described which indicates the existence of organic matter and gas bubbles in peat. A stress-strain-time model is proposed for the compression of organic matter, and the surface tension effect is considered in the compression model of gas bubbles. Finally, a mathematical model has been developed to simulate the deformation behavior of peat considering the compressibility of organic matter and entrapped gas bubbles. The deformation process is the coupling of volume variation of organic matter, gas bubbles and water drainage. The proposed model is used to simulate a series of peat laboratory oedometer tests, and the model can well capture the test results with reasonable model parameters. Effects of model parameters on deformation of peat are also analyzed. PMID:27247870

  7. Diagenesis of Organic Matter in a Virginia Salt Marsh: Evaluation Through Compound Specific Isotope Analysis

    NASA Astrophysics Data System (ADS)

    Macko, S. A.; Geyer, M.

    2004-05-01

    Resolving the early diagenetic pathways to preservation of organic matter in a sedimentary sequence is one of the most intriguing challenges in organic geochemistry. What is preserved is usually ascribed to be either the product of retention of refractory materials or "protected" remnants of the destruction of the more labile matter, or more likely, a combination of both processes. A third mechanism, acquisition of newly synthesized material resulting from microbially mediated reactions, is less frequently invoked. In this study, the sources for the preserved organic matter and the sedimentary history of a Spartina marsh sequence on North Hog Island at the Virginia Coast Reserve Long Term Ecological Research (VCR-LTER) site are reported. Through the utilization of both carbon and nitrogen bulk isotopic compositions and compound specific isotopic analyses (CSIA) as well as the distributions of individual fatty acids, the depositional sequences are assessed. The variations in the cores for bulk organic carbon and nitrogen delta 13C and delta 15N typically ranged from -17 to -15 permil and +4 to +10 permil, respectively. The isotopic compositions generally show a trend of increasing in the heavy isotope downcore. These variations can be attributed to microbial utilization of amino acids resulting in bulk isotopic enrichments in deeper layers. Extensive microbial activity was evidenced at depth with increased amounts of odd-chain and branched-chain fatty acids. Overall, there is a decline with increasing depth in the amount of quantifiable fatty acids. Through the CSIA measurements, the original source of the preserved molecular components was observed to be essentially that of the Spartina, with loss of unsaturation deeper in the sequence. At greater depths, newly synthesized, longer-chain, unsaturated fatty acids were observed, possibly resulting from anaerobic pathways. Through mass balance using isotopic compositions of proposed bacterial endmember fatty acids, a

  8. Spectral band selection for classification of soil organic matter content

    NASA Technical Reports Server (NTRS)

    Henderson, Tracey L.; Szilagyi, Andrea; Baumgardner, Marion F.; Chen, Chih-Chien Thomas; Landgrebe, David A.

    1989-01-01

    This paper describes the spectral-band-selection (SBS) algorithm of Chen and Landgrebe (1987, 1988, and 1989) and uses the algorithm to classify the organic matter content in the earth's surface soil. The effectiveness of the algorithm was evaluated comparing the results of classification of the soil organic matter using SBS bands with those obtained using Landsat MSS bands and TM bands, showing that the algorithm was successful in finding important spectral bands for classification of organic matter content. Using the calculated bands, the probabilities of correct classification for climate-stratified data were found to range from 0.910 to 0.980.

  9. Interstellar chemistry recorded in organic matter from primitive meteorites.

    PubMed

    Busemann, Henner; Young, Andrea F; Alexander, Conel M O'd; Hoppe, Peter; Mukhopadhyay, Sujoy; Nittler, Larry R

    2006-05-01

    Organic matter in extraterrestrial materials has isotopic anomalies in hydrogen and nitrogen that suggest an origin in the presolar molecular cloud or perhaps in the protoplanetary disk. Interplanetary dust particles are generally regarded as the most primitive solar system matter available, in part because until recently they exhibited the most extreme isotope anomalies. However, we show that hydrogen and nitrogen isotopic compositions in carbonaceous chondrite organic matter reach and even exceed those found in interplanetary dust particles. Hence, both meteorites (originating from the asteroid belt) and interplanetary dust particles (possibly from comets) preserve primitive organics that were a component of the original building blocks of the solar system. PMID:16675696

  10. Pyrogenic organic matter can alter microbial communication

    NASA Astrophysics Data System (ADS)

    Masiello, Caroline; Gao, Xiaodong; Cheng, Hsiao-Ying; Silberg, Jonathan

    2016-04-01

    Soil microbes communicate with each other to manage a large range of processes that occur more efficiently when microbes are able to act simultaneously. This coordination occurs through the continuous production of signaling compounds that are easily diffused into and out of cells. As the number of microbes in a localized environment increases, the internal cellular concentration of these signaling compounds increases, and when a threshold concentration is reached, gene expression shifts, leading to altered (and coordinated) microbial behaviors. Many of these coordinated behaviors have biogeochemically important outcomes. For example, methanogenesis, denitrification, biofilm formation, and the development of plant-rhizobial symbioses are all regulated by a simple class of cell-cell signaling molecules known as acyl homoserine lactones (AHLs). Pyrogenic organic matter in soils can act to disrupt microbial communication through multiple pathways. In the case of AHLs, charcoal's very high surface area can sorb these signaling compounds, preventing microbes from detecting each others' presence (Masiello et al., 2014). In addition, the lactone ring in AHLs is vulnerable to pH increases accompanying PyOM inputs, with soil pH values higher than 7-8 leading to ring opening and compound destabilization. Different microbes use different classes of signaling compounds, and not all microbial signaling compounds are pH-vulnerable. This implies that PyOM-driven pH increases may trigger differential outcomes for Gram negative bacteria vs fungi, for example. A charcoal-driven reduction in microbes' ability to detect cell-cell communication compounds may lead to a shift in the ability of microbes to participate in key steps of C and N cycling. For example, an increase in an archaeon-specific AHL has been shown to lead to a cascade of metabolic processes that eventually results in the upregulation of CH4 production (Zhang et al., 2012). Alterations in similar AHL compounds leads to

  11. Organic matter diagenesis in shallow water carbonate sediments

    NASA Astrophysics Data System (ADS)

    Ingalls, Anitra E.; Aller, Robert C.; Lee, Cindy; Wakeham, Stuart G.

    2004-11-01

    Muddy carbonate deposits near the Dry Tortugas, Florida, are characterized by high organic carbon remineralization rates. However, approximately half of the total sedimentary organic matter potentially supporting remineralization is occluded in CaCO 3 minerals (intracrystalline). While a portion of nonintracrystalline organic matter appears to cycle rapidly, intracrystalline organic matter has an approximately constant concentration with depth, suggesting that as long as its protective mineral matrix is intact, it is not readily remineralized. Organic matter in excess of intracrystalline organic matter that is preserved may have a variety of mineral associations (e.g., intercrystalline, adsorbed or detrital). In surface sediment, aspartic acid contributed ˜22 mole % and ˜50 mole % to nonintracrystalline and intracrystalline pools, respectively. In deeper sediment (1.6-1.7m), the composition of hydrolyzable amino acids in both pools was similar (aspartic acid ˜40 mole %). Like amino acids, intracrystalline and nonintracrystalline fatty acids have different compositions in surface sediments, but are indistinguishable at depth. These data suggest that preserved organic matter in the nonintracrystalline pool is stabilized by its interactions with CaCO 3. Neutral lipids are present in very low abundances in the intracrystalline pool and are extensively degraded in both the intracrystalline and nonintracrystalline pools, suggesting that mineral interactions do not protect these compounds from degradation. The presence of chlorophyll- a, but absence of phytol, in the intracrystalline lipid pool demonstrates that chloropigments are present only in the nonintracrystalline pool. Sedimentary chloropigments decrease with depth at similar rates in Dry Tortugas sediments as found in alumino-silicate sediments from the Long Island Sound, suggesting that chloropigment degradation is largely unaffected by mineral interactions. Overall, however, inclusion and protection of

  12. Dissolved effluent organic matter: Characteristics and potential implications in wastewater treatment and reuse applications.

    PubMed

    Michael-Kordatou, I; Michael, C; Duan, X; He, X; Dionysiou, D D; Mills, M A; Fatta-Kassinos, D

    2015-06-15

    Wastewater reuse is currently considered globally as the most critical element of sustainable water management. The dissolved effluent organic matter (dEfOM) present in biologically treated urban wastewater, consists of a heterogeneous mixture of refractory organic compounds with diverse structures and varying origin, including dissolved natural organic matter, soluble microbial products, endocrine disrupting compounds, pharmaceuticals and personal care products residues, disinfection by-products, metabolites/transformation products and others, which can reach the aquatic environment through discharge and reuse applications. dEfOM constitutes the major fraction of the effluent organic matter (EfOM) and due to its chemical complexity, it is necessary to utilize a battery of complementary techniques to adequately describe its structural and functional character. dEfOM has been shown to exhibit contrasting effects towards various aquatic organisms. It decreases metal uptake, thus potentially reducing their bioavailability to exposed organisms. On the other hand, dEfOM can be adsorbed on cell membranes inducing toxic effects. This review paper evaluates the performance of various advanced treatment processes (i.e., membrane filtration and separation processes, activated carbon adsorption, ion-exchange resin process, and advanced chemical oxidation processes) in removing dEfOM from wastewater effluents. In general, the literature findings reveal that dEfOM removal by advanced treatment processes depends on the type and the amount of organic compounds present in the aqueous matrix, as well as the operational parameters and the removal mechanisms taking place during the application of each treatment technology. PMID:25917290

  13. Investigation of the organic matter in inactive nuclear tank liquids

    SciTech Connect

    Schenley, R.L.; Griest, W.H.

    1990-08-01

    Environmental Protection Agency (EPA) methodology for regulatory organics fails to account for the organic matter that is suggested by total organic carbon (TOC) analysis in the Oak Ridge National Laboratory (ORNL) inactive nuclear waste-tank liquids and sludges. Identification and measurement of the total organics are needed to select appropriate waste treatment technologies. An initial investigation was made of the nature of the organics in several waste-tank liquids. This report details the analysis of ORNL wastes.

  14. Characterizing Variability In Ohio River Natural Organic Matter

    EPA Science Inventory

    Surface water contains natural organic matter (NOM) which reacts with disinfectants creating disinfection byproducts (DBPs), some of which are USEPA regulated contaminants. Characterizing NOM can provide important insight on DBP formation and water treatment process adaptation t...

  15. Ectomycorrhizal fungi - potential organic matter decomposers, yet not saprotrophs.

    PubMed

    Lindahl, Björn D; Tunlid, Anders

    2015-03-01

    Although hypothesized for many years, the involvement of ectomycorrhizal fungi in decomposition of soil organic matter remains controversial and has not yet been fully acknowledged as an important factor in the regulation of soil carbon (C) storage. Here, we review recent findings, which support the view that some ectomycorrhizal fungi have the capacity to oxidize organic matter, either by 'brown-rot' Fenton chemistry or using 'white-rot' peroxidases. We propose that ectomycorrhizal fungi benefit from organic matter decomposition primarily through increased nitrogen mobilization rather than through release of metabolic C and question the view that ectomycorrhizal fungi may act as facultative saprotrophs. Finally, we discuss how mycorrhizal decomposition may influence organic matter storage in soils and mediate responses of ecosystem C sequestration to environmental changes. PMID:25524234

  16. Combining chemical sequential extractions with 3D fluorescence spectroscopy to characterize sludge organic matter.

    PubMed

    Muller, Mathieu; Jimenez, Julie; Antonini, Maxime; Dudal, Yves; Latrille, Eric; Vedrenne, Fabien; Steyer, Jean-Philippe; Patureau, Dominique

    2014-12-01

    The design and management of anaerobic digestion of sewage sludge (SS) require a relevant characterisation of the sludge organic matter (OM). Methods currently used are time-consuming and often insufficiently informative. A new method combining chemical sequential extractions (CSE) with 3D fluorescence spectroscopy was developed to provide a relevant SS characterisation to assess both OM bioaccessibility and complexity which govern SS biodegradability. CSE fractionates the sludge OM into 5 compartments of decreasing accessibility. First applied on three SS samples with different OM stability, fractionation profiles obtained were in accordance with the latter. 3D fluorescence spectroscopy revealed that the bioaccessible compartments were mainly constituted of simple and easily biodegradable OM while the unaccessible ones were largely made of complex and refractory OM. Then, primary, secondary and anaerobically digested sludge with different biodegradabilities were tested. Complexity revealed by 3D fluorescence spectroscopy was linked with biodegradability and chemical accessibility was correlated with sludge bioaccessibility. PMID:25223440

  17. The fate of terrestrial organic matter in two Scottish sea lochs

    NASA Astrophysics Data System (ADS)

    Loh, P. S.; Reeves, A. D.; Harvey, S. M.; Overnell, J.; Miller, A. E. J.

    2008-02-01

    Sea lochs are zones of rapid organic matter (OM) turnover. Most of this OM is of allochthonous origin, being introduced into the lochs via freshwater input. In this study the behaviour of terrestrially derived OM was elucidated using a combination of parameters which indicate OM diagenesis in the near surface sediments from two Scottish sea lochs, Loch Creran and Loch Etive. Alkaline CuO oxidation was used to determine lignin phenols which serve as biomarkers for terrestrial OM in sediments. Stable carbon isotope, total carbon and nitrogen and total OM (including the labile and refractory fractions) compositions were also determined. Lignin materials in the lochs were generally highly degraded and undergo little degradation further seaward. The vanillic acid to vanillin ratio, (Ad/Al)v in the lochs ranged from 0.52 to 2.69. However, there was a fraction of relatively fresh, land-derived OM, still undergoing degradation adding to the carbon cycling in the lochs, as indicated by the Rp values (ratio of refractory to total OM) and OC/N ratios in the surface sediments. The hydrological and hydrodynamic regimes in Loch Creran result in several phenomena such as the transportation of terrestrial debris via hydrodynamic sorting processes and the promotion of surface sediment diagenesis by bioturbation. Frequent water renewal results in better water circulation and oxygenation which facilitate OM decomposition. In Loch Etive the less frequent renewal gives rise to a more constant OM diagenesis along the loch.

  18. Composition and reactivity of ferrihydrite-organic matter associations

    NASA Astrophysics Data System (ADS)

    Eusterhues, Karin; Hädrich, Anke; Neidhardt, Julia; Küsel, Kirsten; Totsche, Kai

    2014-05-01

    The formation of organo-mineral associations affects many soil forming processes. On the one hand, it will influence soil organic matter composition and development, because the complex organic matter mixtures usually fractionate during their association with mineral surfaces. Whereas the associated fraction is supposed to be stabilized, the non-associated fraction remains mobile and available to degradation by microorganisms. On the other hand, the organic coating will completely change the interface properties of Fe oxides such as solubility, charge and hydrophobicity. This in turn will strongly influence their reactivity towards nutrients and pollutants, the adsorption of new organic matter, and the availability of ferric Fe towards microorganisms. To better understand such processes we produced ferrihydrite-organic matter associations by adsorption and coprecipitation in laboratory experiments. As a surrogate for dissolved soil organic matter we used the water-extractable fraction of a Podzol forest-floor layer under spruce. Sorptive fractionation of the organic matter was investigated by 13C NMR and FTIR. Relative to the original forest-floor extract, the ferrihydrite-associated OM was enriched in polysaccharides but depleted in aliphatic C and carbonyl C, especially when adsorption took place. Liquid phase incubation experiments were carried out with an inoculum extracted from the podzol forest-floor under oxic conditions at pH 4.8 to quantify the mineralization of the adsorbed and coprecipitated organic matter. These experiments showed that the association with ferrihydrite stabilized the associated organic matter, but that differences in the degradability of adsorbed and coprecipitated organic matter were small. We therefore conclude that coprecipitation does not lead to a significant formation of microbial inaccessible organic matter domains. Microbial reduction experiments were performed using Geobacter bremensis. We observed that increasing amounts of

  19. Organic matter dynamics and budgets in the turbidity maximum zone of the Seine Estuary (France)

    NASA Astrophysics Data System (ADS)

    Garnier, Josette; Billen, Gilles; Even, Stéphanie; Etcheber, Henri; Servais, Pierre

    2008-03-01

    Organic matter was studied in the turbidity maximum zone (TMZ) of the Seine Estuary during 8 tidal cycles from April to October in 2001, 2002 and 2003, covering a salinity range from 0 to 27. The hydrological conditions were quite varied (extremely wet in 2001, unusually dry in 2003). A particularly striking feature is the high organic matter content in the suspended solids (SS) of the Seine estuary (4-5%). By determining micro-organism activity and organic carbon partitioning, either linked to particles or in dissolved forms, and estimating the TMZ water volumes, together with SS, we extrapolated these activities and stocks to the whole TMZ. Carbon metabolism in the TMZ and fluxes upstream of the TMZ were compared on the dates of field surveys, and the routes and fate of carbon in the TMZ were quantified in order to learn about the trophic status of this estuarine zone in terms of autotrophy vs. heterotrophy. The upstream total organic carbon (TOC) fluxes (48% of particulate organic carbon (POC), 52% of dissolved organic carbon (DOC) on average) varied fourfold between the surveys, reaching the highest value of 280 TC d -1 during the wet summer of 2001; and the lowest value of about 70 TC d -1 in August 2003. Whereas nearly all of the DOC flux entering the TMZ reaches the coastal marine zone, mostly (at least 85%) in a refractory form, the POC accumulates in the TMZ of the estuarine channel, particle exportation being negligible. In the TMZ, biodegradation of DOC was, on average, much less (only a 2% decrease in the BDOC/DOC ratio between the TMZ upstream and downstream fluxes) than biodegradation of POC (11%). A simplified model of the TMZ (LIFT- Lumped Idealisation of the ecological Functioning in estuarine Turbidity maximum) was constructed for investigating the dynamics of organic matter on a seasonal scale. The agreement between observation and calculation allowed us to run sensitivity tests using new constraints; reductions of the upstream fluxes of

  20. Alteration of organic matter during infaunal polychaete gut passage and links to sediment organic geochemistry. Part I: Amino acids

    NASA Astrophysics Data System (ADS)

    Woulds, Clare; Middelburg, Jack J.; Cowie, Greg L.

    2012-01-01

    labelled glycine. Possible mechanisms for this enrichment include accumulation through inclusion in tissues with long residence times, preferential preservation (i.e. selection against) during metabolism, production from other labelled amino acids during varied metabolic processes, and accumulation in refractory by-products of secondary bacterial production. Overall, similarities were observed between amino-acid decay patterns in faunated microcosms, afaunal controls, and those previously reported in marine sediments. Thus, while polychaete gut passage did produce compound-selective accumulation and losses of certain amino acids in polychaete tissues and faecal matter, the impact of polychaete gut passage on sediment organic geochemistry was difficult to deconvolve from microbial decay. Despite processing large volumes of organic matter, polychaetes may not have distinctive influence on sediment compositions, possibly because metabolic processes concerning amino acids may be broadly similar across a wide range of organisms.

  1. High dimensional reflectance analysis of soil organic matter

    NASA Technical Reports Server (NTRS)

    Henderson, T. L.; Baumgardner, M. F.; Franzmeier, D. P.; Stott, D. E.; Coster, D. C.

    1992-01-01

    Recent breakthroughs in remote-sensing technology have led to the development of high spectral resolution imaging sensors for observation of earth surface features. This research was conducted to evaluate the effects of organic matter content and composition on narrowband soil reflectance across the visible and reflective infrared spectral ranges. Organic matter from four Indiana agricultural soils, ranging in organic C content from 0.99 to 1.72 percent, was extracted, fractionated, and purified. Six components of each soil were isolated and prepared for spectral analysis. Reflectance was measured in 210 narrow bands in the 400- to 2500-nm wavelength range. Statistical analysis of reflectance values indicated the potential of high dimensional reflectance data in specific visible, near-infrared, and middle-infrared bands to provide information about soil organic C content, but not organic matter composition. These bands also responded significantly to Fe- and Mn-oxide content.

  2. The search for indigenous lunar organic matter.

    NASA Technical Reports Server (NTRS)

    Sagan, C.

    1972-01-01

    It is argued that the absence of organic compounds from returned lunar samples is to be expected even for a lunar history rich in primordial organics. The sites most likely to yield lunar organic compounds have not been investigated, and there may be an area of investigation conceivably critical to problems in prebiological chemistry and the early history of the solar system awaiting continued lunar exploration, manned or unmanned.

  3. Organic Matter in Space (IAU S251)

    NASA Astrophysics Data System (ADS)

    Kwok, Sun; Sanford, Scott

    2009-01-01

    Preface; From the local organising committee; Organising committee; Conference participants; Opening address of Symposium 251 C. Cesarsky; Session I. Observations of organic compounds beyond the Solar System William Irvine, Ewine van Dishoeck, Yvonne Pendleton and Hans Olofsson; Session II. Organic compounds within the Solar System Scott Sandford, Ernst Zinner and Dale Cruikshank; Session III. Laboratory analogues of organic compounds in space Max Bernstein and Thomas Henning; Banquet speech; Author index; Object index.

  4. Organic Matter in Space (IAU S251)

    NASA Astrophysics Data System (ADS)

    Kwok, Sun; Sanford, Scott

    2008-10-01

    Preface; From the local organising committee; Organising committee; Conference participants; Opening address of Symposium 251 C. Cesarsky; Session I. Observations of organic compounds beyond the Solar System William Irvine, Ewine van Dishoeck, Yvonne Pendleton and Hans Olofsson; Session II. Organic compounds within the Solar System Scott Sandford, Ernst Zinner and Dale Cruikshank; Session III. Laboratory analogues of organic compounds in space Max Bernstein and Thomas Henning; Banquet speech; Author index; Object index.

  5. Modeling organic matter stabilization during windrow composting of livestock effluents.

    PubMed

    Oudart, D; Paul, E; Robin, P; Paillat, J M

    2012-01-01

    Composting is a complex bioprocess, requiring a lot of empirical experiments to optimize the process. A dynamical mathematical model for the biodegradation of the organic matter during the composting process has been developed. The initial organic matter expressed by chemical oxygen demand (COD) is decomposed into rapidly and slowly degraded compartments and an inert one. The biodegradable COD is hydrolysed and consumed by microorganisms and produces metabolic water and carbon dioxide. This model links a biochemical characterization of the organic matter by Van Soest fractionating with COD. The comparison of experimental and simulation results for carbon dioxide emission, dry matter and carbon content balance showed good correlation. The initial sizes of the biodegradable COD compartments are explained by the soluble, hemicellulose-like and lignin fraction. Their sizes influence the amplitude of the carbon dioxide emission peak. The initial biomass is a sensitive variable too, influencing the time at which the emission peak occurs. PMID:23393964

  6. Defining the quality of soil organic matter

    EPA Science Inventory

    Soils represent the largest terrestrial pool of carbon (C) and hold approximately two-thirds of all C held in these ecosystems. However, not all C in soils is of equal quality. Some fractions of the organic forms, i.e., soil organic carbon (SOC) have long residence times while ...

  7. Roles of organic matter in sediment diagenesis

    SciTech Connect

    Gautier, D.L.

    1986-01-01

    This book is a collection of papers presented at a 1984 symposium of the Society of Economic Paleontologists and Mineralogists (SEPM). It purpose, in the words of its editor, is to bring to the attention of the sedimentological community the importance of interaction of organic compounds with the inorganic sedimentary system and the degree to which organic compounds drive diagenetic systems. Its 16 papers cover topics ranging from laboratory carbonate dissolution to hydrocarbon source-rock evaluation. It contains an excellent group of papers on the role of organic-inorganic interactions in porosity enhancement. An excellent contribution is the paper on organic and inorganic diagenesis in the Shinjo oil field of Japan. At the other end of the scale, however, are several theoretical papers that present greatly oversimplified and/or underedited thermodynamic and mass-transfer models. Nearly all of the papers contribute to the dialogue between organic and inorganic sedimentologists. Because much of this interchange has occurred in support of petroleum exploration, the dialogue has waxed and waned with the ups and downs of the oil market. However, hydrocarbon prospects do not necessarily present the best opportunities for unraveling the complex interrelations between organic and inorganic diagenesis. These interrelations are important in a wide range of diagenetic settings, including early diagenesis in low-organic sediments that have little or no hydrocarbon potential. It is hoped that this book will pave the way for expanded basic research in one of the most important aspects of sediment diagenesis.

  8. Biochemical Characteristics of Organic Matter in a Guano Concretion of Late Miocene or Pliocene Age from Manchester Parish in Jamaica

    PubMed Central

    Spence, Adrian; Hanson, Richard E.; Johnson, Toni; Robinson, Claion; Annells, Richard N.

    2013-01-01

    The biogeochemical fate of organic matter (OM) entering soils is an important issue that must be examined to better understand its roles in nitrogen cycling and as a natural modulator of soil-atmospheric carbon fluxes. Despite these critical roles, there are uncertainties in estimating the contribution of this feedback mechanism due in part to a lack of molecular-level information regarding the origin and labile and refractory inventories of OM in soils. In this study, we used a multi-analytical approach to determine molecular-level information for the occurrence and stabilization of OM in a bird guano concretion of the Late Miocene or Pliocene age in Jamaica. We determined the specific organic structures persisting in the concretion and the possible contribution of fossil organic matter to the OM pool in modern environments. Our results indicate that aliphatic species, presumably of a highly polymethylenic nature [(CH2)n], may significantly contribute to the stable soil-C pool. Although not as significant, proteins and carbohydrates were also enriched in the sample, further suggesting that fossil organic matter may contribute to carbon and nitrogen pools in present day soil organic matter. PMID:23843688

  9. Effects of Crayfish on Quality of Fine Particulate Organic Matter

    NASA Astrophysics Data System (ADS)

    Montemarano, J. J.; Kershner, M. W.; Leff, L. G.

    2005-05-01

    The origin and ontogeny of detritus often determines its bioavailability. Crayfish shred and consume detrital organic matter, influencing fine particulate organic matter (FPOM) availability, composition and quality. Given consumption of FPOM by many invertebrates, crayfish can indirectly affect these organisms by altering FPOM bioavailability through organic matter fragmentation, biofilm disturbance, and defecation. These effects may or may not vary among coarse particulate organic matter (CPOM) from different leaf species. To assess crayfish effects on FPOM quality, crayfish were fed stream-conditioned maple or oak leaves in hanging 1-mm mesh-bottom baskets in aquaria. After 12 h, crayfish and remaining leaves were removed. FPOM fragments that fell through the mesh were vacuum filtered and analyzed for percent organic matter, C:N ratio, and bacterial abundance. The same analyses were conducted on crayfish feces collected using finger cots encasing crayfish abdomens. C:N ratios did not differ between feces and maple leaf CPOM, but were lower in FPOM produced through fragmentation and disturbance (P = 0.023). Overall, crayfish alter the ontogeny of detritus, which may, in turn, affect stream FPOM dynamics.

  10. Organic Matter Application Can Reduce Copper Toxicity in Tomato Plants

    ERIC Educational Resources Information Center

    Campbell, Brian

    2010-01-01

    Copper fungicides and bactericides are often used in tomato cultivation and can cause toxic Cu levels in soils. In order to combat this, organic matter can be applied to induce chelation reactions and form a soluble complex by which much of the Cu can leach out of the soil profile or be taken up safely by plants. Organic acids such as citric,…

  11. Black Carbon in Estuarine and Coastal Ocean Dissolved Organic Matter

    NASA Technical Reports Server (NTRS)

    Mannino, Antonio; Harvey, H. Rodger

    2003-01-01

    Analysis of high-molecular-weight dissolved organic matter (DOM) from two estuaries in the northwest Atlantic Ocean reveals that black carbon (BC) is a significant component of previously uncharacterized DOM, suggesting that river-estuary systems are important exporters of recalcitrant dissolved organic carbon to the ocean.

  12. Pedogenesis evolution of mine technosols: focus onto organic matter implication

    NASA Astrophysics Data System (ADS)

    Grégoire, Pascaud; Marilyne, Soubrand; Laurent, Lemee; Husseini Amelène, El-Mufleh Al; Marion, Rabiet; Emmanuel, Joussein

    2014-05-01

    Keywords: Mine technosols, pedogenesis, organic matter, environmental impact, pyr-GC-MS Technosols include soils subject to strong anthropogenic pressure and particularly to soil influenced by human transformed materials. In this context, abandoned mine sites contain a large amount of transformed waste materials often enriched with metals and/or metalloids. The natural evolution of technosols (pedogenesis) may induces the change in contaminants behaviour in term of stability of bearing phases, modification of pH oxydo-reduction conditions, organic matter turnover, change in permeability, or influence of vegetation cover. The fate of these elements in the soil can induce major environmental problems (contamination of biosphere and water resource). This will contribute to a limited potential use of these soils, which represent yet a large area around the world. The initial contamination of the parental material suggests that the pedological cover would stabilize the soil; however, the chemical reactivity must be taken in consideration particularly with respect to potential metal leachings. In this case, it is quite important to understand the development of soil in this specific context. Consequently, the global aims of this study are to understand the functioning of mine Technosols focusing onto the organic matter implication in their pedogenesis. Indeed, soil organic matter constitutes an heterogeneous fraction of organic compounds that plays an important role in the fate and the transport of metals and metalloids in soils. Three different soil profiles were collected representative to various mining context (contamination, time, climat), respectively to Pb-Ag, Sn and Au exploitations. Several pedological parameters were determined like CEC, pH, %Corg, %Ntot, C/N ratio, grain size distribution and chemical composition. The evolution of the nature of organic matter in Technosol was studied by elemental analyses and thermochemolysis was realized on the total and

  13. Fluorescence spectroscopy for monitoring reduction of natural organic matter and halogenated furanone precursors by biofiltration.

    PubMed

    Peleato, Nicolás M; McKie, Michael; Taylor-Edmonds, Lizbeth; Andrews, Susan A; Legge, Raymond L; Andrews, Robert C

    2016-06-01

    The application of fluorescence spectroscopy to monitor natural organic matter (NOM) reduction as a function of biofiltration performance was investigated. This study was conducted at pilot-scale where a conventional media filter was compared to six biofilters employing varying enhancement strategies. Overall reductions of NOM were identified by measuring dissolved organic carbon (DOC), and UV absorbance at 254 nm, as well as characterization of organic sub-fractions by liquid chromatography-organic carbon detection (LC-OCD) and parallel factors analysis (PARAFAC) of fluorescence excitation-emission matrices (FEEM). The biofilter using granular activated carbon media, with exhausted absorptive capacity, was found to provide the highest removal of all identified PARAFAC components. A microbial or processed humic-like component was found to be most amenable to biodegradation by biofilters and removal by conventional treatment. One refractory humic-like component, detectable only by FEEM-PARAFAC, was not well removed by biofiltration or conventional treatment. All biofilters removed protein-like material to a high degree relative to conventional treatment. The formation potential of two halogenated furanones, 3-chloro-4(dichloromethyl)-2(5H)-furanone (MX) and mucochloric acid (MCA), as well as overall treated water genotoxicity are also reported. Using the organic characterization results possible halogenated furanone and genotoxicity precursors are identified. Comparison of FEEM-PARAFAC and LC-OCD results revealed polysaccharides as potential MX/MCA precursors. PMID:27016810

  14. GROUNDWATER TRANSPORT OF HYDROPHOBIC ORGANIC COMPOUNDS IN THE PRESENCE OF DISSOLVED ORGANIC MATTER

    EPA Science Inventory

    The effects of dissolved organic matter (DOM) on the transport of hydrophobic organic compounds in soil columns were investigated. Three compounds (naphthalene, phenanthrene and DDT) that spanned three orders of magnitude in water solubility were used. Instead of humic matter, mo...

  15. Interstellar and Solar System Organic Matter Preserved in Interplanetary Dust

    NASA Astrophysics Data System (ADS)

    Messenger, Scott R.; Nakamura-Messenger, Keiko

    2015-08-01

    Interplanetary dust particles (IDPs) collected in the Earth’s stratosphere derive from collisions among asteroids and by the disruption and outgassing of short-period comets. Chondritic porous (CP) IDPs are among the most primitive Solar System materials. CP-IDPs have been linked to cometary parent bodies by their mineralogy, textures, C-content, and dynamical histories. CP-IDPs are fragile, fine-grained (< um) assemblages of anhydrous amorphous and crystalline silicates, oxides and sulfides bound together by abundant carbonaceous material. Ancient silicate, oxide, and SiC stardust grains exhibiting highly anomalous isotopic compositions are abundant in CP-IDPs, constituting 0.01 - 1 % of the mass of the particles. The organic matter in CP-IDPs is isotopically anomalous, with enrichments in D/H reaching 50x the terrestrial SMOW value and 15N/14N ratios up to 3x terrestrial standard compositions. These anomalies are indicative of low T (10-100 K) mass fractionation in cold molecular cloud or the outermost reaches of the protosolar disk. The organic matter shows distinct morphologies, including sub-um globules, bubbly textures, featureless, and with mineral inclusions. Infrared spectroscopy and mass spectrometry studies of organic matter in IDPs reveals diverse species including aliphatic and aromatic compounds. The organic matter with the highest isotopic anomalies appears to be richer in aliphatic compounds. These materials also bear similarities and differences with primitive, isotopically anomalous organic matter in carbonaceous chondrite meteorites. The diversity of the organic chemistry, morphology, and isotopic properties in IDPs and meteorites reflects variable preservation of interstellar/primordial components and Solar System processing. One unifying feature is the presence of sub-um isotopically anomalous organic globules among all primitive materials, including IDPs, meteorites, and comet Wild-2 samples returned by the Stardust mission. We will present

  16. Compartmental model for organic matter digestion in facultative ponds.

    PubMed

    Giraldo, E; Garzón, A

    2002-01-01

    A model has been developed for the digestion of organic matter in facultative ponds in tropical regions. Complete mixing has been assumed for the aerobic and anaerobic compartments. Settling, aerobic layer oxidation, and anaerobic layer methanogenesis are the main processes for organic matter removal in the water column. Exchange processes between layers are dispersive or soluble exchange, solubilization and transport of organic matter from sediments to water column are also taken into account. Degradation of organic matter in the sediments produces gaseous emissions to the water column. The exchange between bubbles ascending and the water column was measured. The model was calibrated with data obtained from a pilot facultative pond built in Muña Reservoir in Bogotá. The pond was sampled during 4 months to compare data between its water hyacinth covered section and uncovered section. The results clearly show the relative importance of different BOD removal processes in facultative ponds and suggest modifications to further improve performance. The results from the model suggest that internal loadings to facultative ponds due to solubilization and return of organic matter from the sediments to the aerobic layer greatly influence the soluble BOD effluent concentration. Aerobic degradation activity in the facultative pond does not affect significantly the effluent concentration. Anaerobic degradation activity in the facultative pond can more easily achieve increases in the removal efficiencies of BOD. PMID:11833730

  17. Black carbon and organic matter stabilization in soil

    NASA Astrophysics Data System (ADS)

    Lehmann, J.; Liang, B.; Sohi, S.; Gaunt, J.

    2007-12-01

    Interaction with minerals is key to stabilization of organic matter in soils. Stabilization is commonly perceived to occur due to entrapment in pore spaces, encapsulation within aggregates or interaction with mineral surfaces. Typically only interactions between organic matter and minerals are considered in such a model. Here we demonstrate that black carbon may act very similar to minerals in soil in that it enhances the stabilization of organic matter. Mineralization of added organic matter was slower and incorporation into intra-aggregate fractions more rapid in the presence of black carbon. Added double-labeled organic matter was recovered in fractions with high amounts of black carbon. Synchrotron-based near-edge x-ray fine structure (NEXAFS) spectroscopy coupled to scanning transmission x-ray microscopy (STXM) suggested a possible interaction of microorganisms with black carbon surfaces and metabolization of residues. These findings suggest a conceptual model that includes carbon-carbon interactions and by-passing for more rapid stabilization of litter into what is commonly interpreted as stable carbon pools.

  18. Meiofaunal distributions on the Peru margin:. relationship to oxygen and organic matter availability

    NASA Astrophysics Data System (ADS)

    Neira, Carlos; Sellanes, Javier; Levin, Lisa A.; Arntz, Wolf E.

    2001-11-01

    's r=0.99, p<0.01) suggests that most of the sedimentary organic material sampled was of phytodetrital origin. The fraction of sediment organic carbon potentially available to benthic heterotrophs, measured as C-LOM/Total organic carbon, was on average 17% at all stations. Thus, a residual, refractory fraction, constitutes the major portion of organic matter at the studied bathyal sites.

  19. Removal of dissolved organic matter by anion exchange: Effect of dissolved organic matter properties

    USGS Publications Warehouse

    Boyer, T.H.; Singer, P.C.; Aiken, G.R.

    2008-01-01

    Ten isolates of aquatic dissolved organic matter (DOM) were evaluated to determine the effect that chemical properties of the DOM, such as charge density, aromaticity, and molecular weight, have on DOM removal by anion exchange. The DOM isolates were characterized asterrestrial, microbial, or intermediate humic substances or transphilic acids. All anion exchange experiments were conducted using a magnetic ion exchange (MIEX) resin. The charge density of the DOM isolates, determined by direct potentiometric titration, was fundamental to quantifying the stoichiometry of the anion exchange mechanism. The results clearly show that all DOM isolates were removed by anion exchange; however, differences among the DOM isolates did influence their removal by MIEX resin. In particular, MIEX resin had the greatest affinity for DOM with high charge density and the least affinity for DOM with low charge density and low aromaticity. This work illustrates that the chemical characteristics of DOM and solution conditions must be considered when evaluating anion exchange treatment for the removal of DOM. ?? 2008 American Chemical Society.

  20. Organic matter on asteroid 130 Elektra

    NASA Technical Reports Server (NTRS)

    Cruikshank, D. P.; Brown, R. H.

    1987-01-01

    Infrared absorption spectra of a low-albedo water-rich asteroid appear to show a weak 3.4-micrometer carbon-hydrogen stretching mode band, which suggests the presence of hydrocarbons on asteroid 130 Elektra. The organic extract from the primitive carbonaceous chondritic Murchison meteorite shows similar spectral bands.

  1. A three-year time series of elemental and biochemical composition of organic matter in subtidal sandy sediments of the Ligurian Sea (northwestern Mediterranean)

    NASA Astrophysics Data System (ADS)

    Fabiano, M.; Danovaro, R.; Fraschetti, S.

    Variations in organic matter composition and microphytobenthic biomass were examined in the surface sandy sediments at a water depth of 10 m in the Gulf of Marconi (NW Mediterranean Sea) over a three year period. Seasonal changes in elemental (organic C and total N) and biochemical (lipids, proteins, carbohydrates) composition of sediment organic matter as well as Chla were assessed in order to provide information about the origin and fate of sedimentary organic matter, the contribution of microphytobenthic biomass, seasonal and interannual variations of food quantity and quality, and factors related to food availability. Data obtained in this three-year study revealed that organic matter determined with a muffle furnace is clearly an overestimate of the organic content of the sediment and is thus of little significance for benthic ecologists studying community dynamics in relation to food availability. Labile organic matter, utilized to estimate the food potentially available for benthic consumers, accounted for only a small percentage (on average less than 10%) of total organic C. The highest labile fraction was observed in spring, whereas minima were recorded in winter. Analysis of elemental and biochemical composition of organic matter showed an inverse relationship between amount of organic matter and its potential availability to consumers; small quantities of high-quality organic matter were replaced by large quantities of refractory material. The labile portion was mostly microphytobenthic (65% of the labile carbon). Protein: carbohydrate ratios were low and confirmed the role of proteins as a potentially limiting factor for consumers. Significant differences in nutritional quality of the sediment organic matter were observed from year to year, changes due to the increase in specific labile compound content.

  2. Organic matter in the Saturn system

    NASA Technical Reports Server (NTRS)

    Sagan, C.; Khare, B. N.; Lewis, J. S.

    1984-01-01

    Theoretical and experimental predictions of the formation (and outgassing) of organic molecules in the outer solar system are compared with Voyager IRIS spectral data for the Titan atmosphere. The organic molecules of Titan are of interest because the species and processes within the atmosphere of that moon may have had analogs in the early earth atmosphere 4 Gyr ago. The spacecraft data confirmed the presence of alkanes, ethane, propane, ethylene, alkynes, acetylene, butadiene, methylacetylene, nitriles, hydrogen cyanide, cyanoacetylene, and cyanogen, all heavier than the dominant CH4. Experimental simulation of the effects of UV photolysis, alpha and gamma ray irradiation, electrical discharges and proton and electron bombardment of similar gas mixtures has shown the best promise for modeling the reactions producing the Titan atmosphere chemicals.

  3. Dissolved Organic Matter in Headwater Streams: Compositional Variability across Climatic Regions of North America

    NASA Astrophysics Data System (ADS)

    Jaffé, R.; Yamashita, Y.; Maie, N.; Cooper, W. T.; Dittmar, T.; Dodds, W. K.; Jones, J. B.; Myoshi, T.; Ortiz-Zayas, J. R.; Podgorski, D. C.; Watanabe, A.

    2012-10-01

    Dissolved organic matter (DOM) represents the largest organic matter pool in freshwater systems, but much of it remains molecularly uncharacterized. Although freshwater systems cover only a small area of the earth's surface, inland waters are an important component of the global carbon cycle. The traditional idea that rivers are simply conduits for refractory carbon delivery to coastal areas is inconsistent with carbon flux estimates, and streams have been shown to serve as reactors for DOM cycling. The overall quality of DOM, and its associated reactivity, can be related to its chemical composition and molecular structure. However, the variability of DOM composition in freshwater ecosystems, particularly in headwater streams, is poorly characterized. Detailed molecular studies of DOM from small streams across climatic regions, which could provide critical information regarding carbon dynamics on a more global scale, have not been performed. To address these issues, this study applies a multi-method analytical approach in an attempt to assess molecular characteristics of DOM and ultrafiltered DOM (UDOM) in headwater streams from different climatic regions in North America. In general terms the chemical and molecular characteristics of UDOM from six different biomes were determined in unsurpassed detail to feature some clear general similarities but also specific differences. While the degree of similarity is remarkable, and suggests similar source strengths, such as soil-derived organic matter and/or similar diagenetic degradation processes for DOM from vastly different environments, each sample was clearly unique in its overall composition, featuring some distinct molecular patterns for at least one or more of the analytical determinations. Molecular and compositional differences of DOM from headwater streams should result from variations in DOM sources and localized environmental conditions, and consequently feature different photo- and bio-reactivity and

  4. Do soils loose phosphorus with dissolved organic matter?

    NASA Astrophysics Data System (ADS)

    Kaiser, K.; Brödlin, D.; Hagedorn, F.

    2014-12-01

    During ecosystem development and soil formation, primary mineral sources of phosphorus are becoming increasingly depleted. Inorganic phosphorus forms tend to be bound strongly to or within secondary minerals, thus, are hardly available to plants and are not leached from soil. What about organic forms of phosphorus? Since rarely studied, little is known on the composition, mobility, and bioavailability of dissolved organic phosphorus. There is some evidence that plant-derived compounds, such as phytate, bind strongly to minerals as well, while microbial compounds, such as nucleotides and nucleic acids, may represent more mobile fractions of soil phosphorus. In some weakly developed, shallow soils, leaching losses of phosphorus seem to be governed by mobile organic forms. Consequently, much of the phosphorus losses observed during initial stages of ecosystem development may be due to the leaching of dissolved organic matter. However, the potentially mobile microbial compounds are enzymatically hydrolysable. Forest ecosystems on developed soils already depleted in easily available inorganic phosphorus are characterized by rapid recycling of organic phosphors. That can reduce the production of soluble forms of organic phosphorus as well as increase the enzymatic hydrolysis and subsequent plant uptake of phosphorus bound within dissolved organic matter. This work aims at giving an outlook to the potential role of dissolved organic matter in the cycling of phosphorus within developing forest ecosystems, based on literature evidence and first results of ongoing research.

  5. Isotopic composition of hydrogen in insoluble organic matter from cherts

    NASA Technical Reports Server (NTRS)

    Krishnamurthy, R. V.; Epstein, S.

    1991-01-01

    Robert (1989) reported the presence of unusually enriched hydrogen in the insoluble HF-HCl residue extracted from two chert samples of Eocene and Pliocene ages. Since the presence of heavy hydrogen might be due to the incorporation of extraterrestrial materials, we desired to reexamine the same samples to isolate the D-rich components. Our experiments did not reveal any D-rich components, but the hydrogen isotope composition of the insoluble residue of the two chert samples was well within the range expected for terrestrial organic matter. We also describe a protocol that needs to be followed in the hydrogen isotope analysis of any insoluble organic matter.

  6. Molecular insights into the microbial formation of marine dissolved organic matter: recalcitrant or labile?

    NASA Astrophysics Data System (ADS)

    Koch, B. P.; Kattner, G.; Witt, M.; Passow, U.

    2014-02-01

    The degradation of marine dissolved organic matter (DOM) is an important control variable in the global carbon cycle and dependent on the DOM composition. For our understanding of the kinetics of organic matter cycling in the ocean, it is therefore crucial to achieve a mechanistic and molecular understanding of its transformation processes. A long-term microbial experiment was performed to follow the production of non-labile DOM by marine bacteria. Two different glucose concentrations and dissolved algal exudates were used as substrates. We monitored the bacterial abundance, concentrations of dissolved and particulate organic carbon (DOC, POC), nutrients, amino acids, and transparent exopolymer particles (TEP) for two years. Ultrahigh resolution Fourier Transform Ion Cyclotron Resonance Mass Spectrometry (FT-ICR-MS) allowed the molecular characterization of extracted DOM after 70 days and after ∼2 years of incubation. Although glucose was quickly degraded, a DOC background was generated in glucose incubations. Only 20% of the organic carbon from algal exudate was degraded within the 2 years of incubation. TEP, which are released by micro-organisms, were produced during glucose degradation but decreased within less than three weeks back to half of the maximum concentration and were below detection in all treatments after 2 years. The molecular analysis demonstrated that DOM generated during glucose degradation differed appreciably from DOM produced during the degradation of the algal exudates. Our results led to several conclusions: (i) Higher substrate levels result in a higher level of non-labile DOC which is an important prerequisite for carbon sequestration in the ocean; (ii) TEP are generated by bacteria but are also degraded rapidly, thus limiting their potential contribution to carbon sequestration; (iii) The molecular signatures of DOM derived from algal exudates or glucose after 70 days of incubation differed strongly from refractory DOM. After 2 years

  7. Andic soils : mineralogical effect onto organic matter dynamics, organic matter effect onto mineral dynamics, or both?

    NASA Astrophysics Data System (ADS)

    Basile-Doelsch, Isabelle; Amundson, Ronald; Balesdent, Jérome; Borschneck, Daniel; Bottero, Jean-Yves; Colin, Fabrice; de Junet, Alexis; Doelsch, Emmanuel; Legros, Samuel; Levard, Clément; Masion, Armand; Meunier, Jean-Dominique; Rose, Jérôme

    2014-05-01

    From a strictly mineralogical point of view, weathering of volcanic glass produces secondary phases that are short range ordered alumino-silicates (SRO-AlSi). These are imogolite tubes (2 to 3 nm of diameter) and allophane supposedly spheres (3.5 to 5 nm). Their local structure is composed of a curved gibbsite Al layer and Si tetrahedra in the vacancies (Q0). Proto-imogolites have the same local structure but are roof-shape nanoparticles likely representing the precursors of imogolite and allophanes (Levard et al. 2010). These structures and sizes give to the SRO-AlSi large specific surfaces and high reactivities. In some natural sites, imogolites and allophanes are formed in large quantities. Aging of these phases may lead to the formation of more stable minerals (halloysite, kaolinite and gibbsite) (Torn et al 1997). In natural environments, when the weathering of volcanic glass is associated with the establishment of vegetation, the soils formed are generally andosols. These soils are particularly rich in organic matter (OM), which is explained by the high ability of SRO-AlSi mineral phases to form bonds with organic compounds. In a first order "bulk" approach, it is considered that these bonds strongly stabilize the organic compounds as their mean age can reach more than 10 kyrs in some studied sites (Basile-Doelsch et al. 2005; Torn et al. 1997). However, the structure of the mineral phases present in andosols deserves more attention. Traditionally, the presence in the SRO-AlSi andosols was shown by selective dissolution approaches by oxalate and pyrophosphate. Using spectroscopic methods, mineralogical analysis of SRO-AlSi in andosols samples showed that these mineral phases were neither imogolites nor allophanes as originally supposed, but only less organized structures remained in a state of proto-imogolites (Basile-Doelsch al. 2005 ; Levard et al., 2012). The presence of OM would have an inhibitory effect on the formation of secondary mineral phases, by

  8. Composition of dissolved organic matter in groundwater

    NASA Astrophysics Data System (ADS)

    Longnecker, Krista; Kujawinski, Elizabeth B.

    2011-05-01

    Groundwater constitutes a globally important source of freshwater for drinking water and other agricultural and industrial purposes, and is a prominent source of freshwater flowing into the coastal ocean. Therefore, understanding the chemical components of groundwater is relevant to both coastal and inland communities. We used electrospray ionization coupled with Fourier-transform ion cyclotron resonance mass spectrometry (ESI FT-ICR MS) to examine dissolved organic compounds in groundwater prior to and after passage through a sediment-filled column containing microorganisms. The data revealed that an unexpectedly high proportion of organic compounds contained nitrogen and sulfur, possibly due to transport of surface waters from septic systems and rain events. We matched 292 chemical features, based on measured mass:charge ( m/z) values, to compounds stored in the Kyoto Encyclopedia of Genes and Genomes (KEGG). A subset of these compounds (88) had only one structural isomer in KEGG, thus supporting tentative identification. Most identified elemental formulas were linked with metabolic pathways that produce polyketides or with secondary metabolites produced by plants. The presence of polyketides in groundwater is notable because of their anti-bacterial and anti-cancer properties. However, their relative abundance must be quantified with appropriate analyses to assess any implications for public health.

  9. Warming-Induced Changes to the Molecular Composition of Soil Organic Matter

    NASA Astrophysics Data System (ADS)

    Feng, X.; Simpson, M. J.; Simpson, A. J.; Wilson, K. P.; Williams, D.

    2007-12-01

    Soil organic matter (SOM) contains two times more carbon than the atmosphere and the potential changes to SOM quantity and quality with global warming are a major concern. It is commonly believed that global warming will accelerate the decomposition of labile SOM compounds while refractory SOM constituents will remain stable. However, experimental evidence of molecular-level changes to SOM composition with global warming is currently lacking. Here we employ SOM biomarkers and nuclear magnetic resonance (NMR) spectroscopy to study SOM composition and degradation in a soil warming experiment in southern Ontario, Canada. The soil warming experiment consisted of a control and a treatment plot in a mixed forest that had a temperature difference of about 5 degrees C for 14 months. Before soil warming the control and treatment plots had the same organic carbon (OC) content and SOM composition. Soil warming significantly increased soil OC content and the abundance of cutin-derived carbon originating from leaf tissues and decreased carbohydrates that are regarded as easily degradable. Lignin components, which are believed to be part of the stable and slowly-cycling SOM, were observed to be in an advanced stage of degradation. This observation is corroborated by increases in fungal biomass in the warmed soil because fungi are considered the primary decomposer of lignin in the soil environment. An NMR study of SOM in the warmed and control plots indicates that alkyl carbon, mainly originating from plant cuticles in the soil, increased in the warmed soil while O-alkyl carbon, primarily occurring in carbohydrates, decreased. Aromatic and phenolic carbon regions, which include the main structures found in lignin, decreased in the warmed soil. These data collectively suggest that there is a great potential for lignin degradation with soil warming, and that the refractory (aromatic) soil carbon storage may be reduced as a result of increased fungal growth in a warmer climate.

  10. Negative Priming Effect on Organic Matter Mineralisation in NE Atlantic Slope Sediments

    PubMed Central

    Gontikaki, Evangelia; Thornton, Barry; Huvenne, Veerle A. I.; Witte, Ursula

    2013-01-01

    The priming effect (PE) is a complex phenomenon which describes a modification (acceleration or retardation) in the mineralisation rate of refractory organic matter (OM) following inputs of labile material. PEs are well-studied in terrestrial ecosystems owing to their potential importance in the evolution of soil carbon stocks but have been largely ignored in aquatic systems despite the fact that the prerequisite for their occurrence, i.e. the co-existence of labile and refractory OM, is also true for sediments. We conducted stable isotope tracer experiments in continental margin sediments from the NE Atlantic (550–950 m) to study PE occurrence and intensity in relation to labile OM input. Sediment slurries were treated with increasing quantities of the 13C-labelled diatom Thalassiosira rotula and PE was quantified after 7, 14 and 21 days. There was a stepwise effect of diatom quantity on its mineralisation although mineralisation efficiency dropped with increasing substrate amounts. The addition of diatomaceous OM yielded a negative PE (i.e. retardation of existing sediment OM mineralisation) at the end of the experiment regardless of diatom quantity. Negative PE is often the result of preferential utilisation of the newly deposited labile material by the microbial community (“preferential substrate utilization”, PSU) which is usually observed at excessive substrate additions. The fact that PSU and the associated negative PE occurred even at low substrate levels in this study could be attributed to limited amounts of OM subject to priming in our study area (∼0.2% organic carbon [OC]) which seems to be an exception among continental slopes (typically >0.5%OC). We postulate that PEs will normally be positive in continental slope sediments and that their intensity will be a direct function of sediment OC content. More experiments with varying supply of substrate targeting C-poor vs. C-rich sediments are needed to confirm these hypotheses. PMID:23840766

  11. Interstellar and Solar System Organic Matter Preserved in Interplanetary Dust

    NASA Technical Reports Server (NTRS)

    Messenger, Scott; Nakamura-Messenger, Keiko

    2015-01-01

    Interplanetary dust particles (IDPs) collected in the Earth's stratosphere derive from collisions among asteroids and by the disruption and outgassing of short-period comets. Chondritic porous (CP) IDPs are among the most primitive Solar System materials. CP-IDPs have been linked to cometary parent bodies by their mineralogy, textures, C-content, and dynamical histories. CP-IDPs are fragile, fine-grained (less than um) assemblages of anhydrous amorphous and crystalline silicates, oxides and sulfides bound together by abundant carbonaceous material. Ancient silicate, oxide, and SiC stardust grains exhibiting highly anomalous isotopic compositions are abundant in CP-IDPs, constituting 0.01 - 1 % of the mass of the particles. The organic matter in CP-IDPs is isotopically anomalous, with enrichments in D/H reaching 50x the terrestrial SMOW value and 15N/14N ratios up to 3x terrestrial standard compositions. These anomalies are indicative of low T (10-100 K) mass fractionation in cold molecular cloud or the outermost reaches of the protosolar disk. The organic matter shows distinct morphologies, including sub-um globules, bubbly textures, featureless, and with mineral inclusions. Infrared spectroscopy and mass spectrometry studies of organic matter in IDPs reveals diverse species including aliphatic and aromatic compounds. The organic matter with the highest isotopic anomalies appears to be richer in aliphatic compounds. These materials also bear similarities and differences with primitive, isotopically anomalous organic matter in carbonaceous chondrite meteorites. The diversity of the organic chemistry, morphology, and isotopic properties in IDPs and meteorites reflects variable preservation of interstellar/primordial components and Solar System processing. One unifying feature is the presence of sub-um isotopically anomalous organic globules among all primitive materials, including IDPs, meteorites, and comet Wild-2 samples returned by the Stardust mission.

  12. Caracterisation of anthropogenic contribution to the coastal fluorescent organic matter

    NASA Astrophysics Data System (ADS)

    El Nahhal, Ibrahim; Nouhi, Ayoub; Mounier, Stéphane

    2015-04-01

    It is known that most of the coastal fluorescent organic matter is of a terrestrial origin (Parlanti, 2000; Tedetti, Guigue, & Goutx, 2010). However, the contribution of the anthropogenic organic matter to this pool is not well defined and evaluated. In this work the monitoring of little bay (Toulon Bay, France) was done in the way to determine the organic fluorescent response during a winter period. The sampling campaign consisted of different days during the month of December, 2014 ( 12th, 15th, 17th, 19th) on 21 different sampling sites for the fluorescence measurements (without any filtering of the samples) and the whole month of December for the bacterial and the turbidity measurements. Excitation Emission Matrices (EEMs) of fluorescence (from 200 to 400 nm and 220 to 420 nm excitation and emission range) were treated by parallel factor analysis (PARAFAC).The parafac analysis of the EEM datasets was conducted using PROGMEEF software in Matlab langage. On the same time that the turbidity and bacterial measurement (particularly the E.Coli concentration) were determined. The results gives in a short time range, information on the the contribution of the anthropogenic inputs to the coastal fluorescent organic matter. In addition, the effect of salinity on the photochemical degradation of the anthropogenic organic matter (especially those from wastewater treatment plants) will be studied to investigate their fate in the water end member by the way of laboratory experiments. Parlanti, E. (2000). Dissolved organic matter fluorescence spectroscopy as a tool to estimate biological activity in a coastal zone submitted to anthropogenic inputs. Organic Geochemistry, 31(12), 1765-1781. doi:10.1016/S0146-6380(00)00124-8 Tedetti, M., Guigue, C., & Goutx, M. (2010). Utilization of a submersible UV fluorometer for monitoring anthropogenic inputs in the Mediterranean coastal waters. Marine Pollution Bulletin, 60(3), 350-62. doi:10.1016/j.marpolbul.2009.10.018

  13. A marine sink for chlorine in natural organic matter

    NASA Astrophysics Data System (ADS)

    Leri, Alessandra C.; Mayer, Lawrence M.; Thornton, Kathleen R.; Northrup, Paul A.; Dunigan, Marisa R.; Ness, Katherine J.; Gellis, Austin B.

    2015-08-01

    Chloride--the most abundant ion in sea water--affects ocean salinity, and thereby seawater density and ocean circulation. Its lack of reactivity gives it an extremely long residence time. Other halogens are known to be incorporated into marine organic matter. However, evidence of similar transformations of seawater chloride is lacking, aside from emissions of volatile organochlorine by marine algae. Here we report high organochlorine concentrations from 180 to 700 mg kg-1 in natural particulate organic matter that settled into sediment traps at depths between 800 and 3,200 m in the Arabian Sea, taken between 1994 and 1995. X-ray spectromicroscopic imaging of chlorine bonding reveals that this organochlorine exists primarily in concentrated aliphatic forms consistent with lipid chlorination, along with a more diffuse aromatic fraction. High aliphatic organochlorine in particulate material from cultured phytoplankton suggests that primary production is a source of chlorinated organic matter. We also found that particulate algal detritus can act as an organic substrate for abiotic reactions involving Fe2+, H2O2 or light that incorporate chlorine into organic matter at levels up to several grams per kilogram. We conclude that transformations of marine chloride to non-volatile organochlorine through biological and abiotic pathways represent an oceanic sink for this relatively unreactive element.

  14. Adsorption combined with ultrafiltration to remove organic matter from seawater.

    PubMed

    Tansakul, Chatkaew; Laborie, Stéphanie; Cabassud, Corinne

    2011-12-01

    Organic fouling and biofouling are the major severe types of fouling of reverse osmosis (RO) membranes in seawater (SW) desalination. Low pressure membrane filtration such as ultrafiltration (UF) has been developed as a pre-treatment before reverse osmosis. However, UF alone may not be an effective enough pre-treatment because of the existence of low-molecular weight dissolved organic matter in seawater. Therefore, the objective of the present work is to study a hybrid process, powdered activated carbon (PAC) adsorption/UF, with real seawater and to evaluate its performance in terms of organic matter removal and membrane fouling. The effect of different PAC types and concentrations is evaluated. Stream-activated wood-based PAC addition increased marine organic matter removal by up to 70% in some conditions. Moreover, coupling PAC adsorption with UF decreased UF membrane fouling and the fouling occurring during short-term UF was totally reversible. It can be concluded that the hybrid PAC adsorption/UF process performed in crossflow filtration mode is a relevant pre-treatment process before RO desalination, allowing organic matter removal of 75% and showing no flux decline for short-term experiments. PMID:21996607

  15. Processing of Atmospheric Organic Matter by California Radiation Fogs

    NASA Astrophysics Data System (ADS)

    Collett, J. L.; Youngster, S. B.; Lee, T.; Chang, H.; Herckes, P.

    2005-12-01

    In many environments, organic compounds account for a significant fraction of fine particle mass. Because the lifetimes of accumulation mode aerosol particles are governed largely by interactions with clouds, it is important to understand how organic aerosol particles are processed by clouds and fogs. Recently we have examined the organic composition of radiation fogs in central California as well as how these fogs process organic aerosol particles and soluble organic trace gases. Observations indicate that organic matter is a significant component of the fog droplets, comprising approximately one-third of the total solute mass concentration. Concentrations of total organic carbon (TOC) range from approximately 2 to 41 ppmC. Approximately three-fourths of organic matter is typically found in solution as dissolved organic carbon (DOC). A variety of efforts have been made to characterize the composition of the fog organic matter, including analyses by GC/MS, HPLC, IC, NMR and IR. The most abundant species are typically low molecular weight carboxylic acids, small carbonyls and dicarbonyls, and sugar anhydrides. These species have been observed collectively to account for roughly 20-30 percent of the fog DOC. Dicarboxylic acids, frequently used as model compounds for organic CCN, typically account for only a few percent of the organic carbon, with oxalic acid the most important contributor. A significant portion of the fog DOC appears to be comprised of high molecular weight compounds (> 500 Da). Analyses also reveal the presence of organic molecular markers associated with particles produced by various combustion processes. Comparisons of pre-fog and interstitial aerosol samples reveal differences in the relative particle scavenging efficiencies of the fog drops between organic and elemental carbon and between different types of organic carbon. Measurements using a two-stage fog water collector reveal that organic matter tends to be enriched in smaller fog droplets

  16. Analysis of the Organic Matter in Interplanetary Dust Particles: Clues to the Organic Matter in Comets, Asteroids, and Interstellar Grains

    NASA Technical Reports Server (NTRS)

    Flynn, G. J.; Keller, L. P.

    2003-01-01

    Reflection spectroscopy suggests the C- , P-, and D-types of asteroids contain abundant carbon, but these Vis-nearIR spectra are featureless, providing no information on the type(s) of carbonaceous matter. Infrared spectroscopy demonstrates that organic carbon is a significant component in comets and as grains or grain coatings in the interstellar medium. Most of the interplanetary dust particles (IDPs) recovered from the Earth s stratosphere are believed to be fragments from asteroids or comets, thus characterization of the carbon in IDPs provides the opportunity to determine the type(s) and abundance of organic matter in asteroids and comets. Some IDPs exhibit isotopic excesses of D and N-15, indicating the presence of interstellar material. The characterization of the carbon in these IDPs, and particularly any carbon spatially associated with the isotopic anomalies, provides the opportunity to characterize interstellar organic matter.

  17. Aggregation of organic matter by pelagic tunicates

    SciTech Connect

    Pomeroy, L.R.; Deibel, D.

    1980-07-01

    Three genera of pelagic tunicates were fed concentrates of natural seston and an axenic diatom culture. Fresh and up to 4-day-old feces resemble flocculent organic aggregates containing populations of microorganisms, as described from highly productive parts of the ocean, and older feces resemble the nearly sterile flocculent aggregates which are ubiquitous in surface waters. Fresh feces consist of partially digested phytoplankton and other inclusions in an amorphous gelatinous matrix. After 18 to 36 h, a population of large bacteria develops in the matrix and in some of the remains of phytoplankton contained in the feces. From 48 to 96 h, protozoan populations arise which consume the bacteria and sometimes the remains of the phytoplankton in the feces. Thereafter only a sparse population of microorganisms remains, and the particles begin to fragment. Water samples taken in or below dense populations of salps and doliolids contained greater numbers of flocculent aggregates than did samples from adjacent stations.

  18. Search for Organic Matter in Leonid Meteoroids

    NASA Technical Reports Server (NTRS)

    Rairden, Richard L.; Jenniskens, Peter; Laux, Christophe O.; DeVincenzi, Donald L. (Technical Monitor)

    2000-01-01

    Near-ultraviolet 300-410 nm spectra of Leonid meteors were obtained in an effort to measure the strong B to X emission band of the radical CN in Leonid meteor spectra at 387 nm. CN is an expected product of ablation of nitrogen containing organic carbon in the meteoroids as well as a possible product of the aerothermochemistry induced by the kinetic energy of the meteor. A slitless spectrograph with objective grating was deployed on FISTA during the 1999 Leonid Multi-Instrument Aircraft Campaign. Fifteen first-order UV spectra were captured near the 02:00 UT meteor storm peak on November 18. It is found that neutral iron lines dominate the spectrum, with no clear sign of the CN band. The meteor plasma contains less than one CN molecule per three Fe atoms at the observed altitude of about 100 km.

  19. Ultrathin organic semiconductor films--soft matter effect.

    PubMed

    Wang, Tong; Yan, Donghang

    2014-05-01

    The growth of organic semiconductor thin films has been a crucial issue in organic electronics, especially the growth at the early stages. The thin-film phase has been found to be a common phenomenon in many organic semiconductor thin films, which is closely related with the weak van der Waals interaction between organic molecules, the long-range interaction between organic molecules and the substrate, as well as the soft matter characteristics of ultrathin films. The growth behavior and soft matter characteristics of the thin-film phase have great effects on thin film morphology and structure, for example, the formation and coalescence of grain boundaries, which further influences the performance of organic electronic devices. The understanding of thin-film phase and its intrinsic quality is necessary for fabricating large-size, highly ordered, continuous and defect-free ultrathin films. This review will focus on the growth behavior of organic ultrathin films, i.e., the level of the first several molecular layers, and provide an overview of the soft matter characteristics. PMID:24548597

  20. Bromination of marine particulate organic matter through oxidative mechanisms

    NASA Astrophysics Data System (ADS)

    Leri, Alessandra C.; Mayer, Lawrence M.; Thornton, Kathleen R.; Ravel, Bruce

    2014-10-01

    Although bromine (Br) is considered conservative in seawater, it exhibits a well established correlation with organic carbon in marine sediments. This carbon-bromine association was recently attributed to covalent bonding, with organobromine in sinking particulates providing a putative link between sedimentary organobromine and organic matter cycling in surface waters. We hypothesized that phytoplankton detritus, a major precursor of sedimentary organic matter, would be susceptible to bromination through oxidative attack. Through a series of model experiments, we demonstrate incorporation of Br into algal particulate detritus through peroxidative and photochemical mechanisms. Peroxidative bromination was enhanced by addition of exogenous bromoperoxidase, but the enzyme was not required for the reaction. Fenton-like reaction conditions also promoted bromination, especially under solar irradiation, implicating radical mechanisms in the euphotic zone as another abiotic source of brominated particulates. These reactions produced aliphatic and aromatic forms of organobromine, suggesting that lipid- and protein-rich components of algal membranes provide suitable substrates for bromination. Biogenic organobromines in certain genera of phytoplankton also appeared in both aliphatic and aromatic forms. Experimental evidence and samples from oceanic midwater sediment traps imply that the aromatic fraction is more stable than the aliphatic. These experiments establish Br as a versatile oxidant in the transformation of planktonic organic matter through both enzymatic and abiotic mechanisms. Organobromine may serve as a marker of oxidative breakdown of marine organic detritus, with the metastable component providing a short-lived indicator of early-stage oxidation. By altering the stability of aliphatic and aromatic moieties, bromination may affect the availability of organic matter to organisms, with consequences for the preservation and degradation of marine organic carbon.

  1. Black Carbon in Estuarine (Coastal) High-molecular-weight Dissolved Organic Matter

    NASA Technical Reports Server (NTRS)

    Mannino, Antonio; Harvey, H. Rodger

    2003-01-01

    Dissolved organic matter (DOM) in the ocean constitutes one of the largest pools of organic carbon in the biosphere, yet much of its composition is uncharacterized. Observations of black carbon (BC) particles (by-products of fossil fuel combustion and biomass burning) in the atmosphere, ice, rivers, soils and marine sediments suggest that this material is ubiquitous, yet the contribution of BC to the ocean s DOM pool remains unknown. Analysis of high-molecular-weight DOM isolated from surface waters of two estuaries in the northwest Atlantic Ocean finds that BC is a significant component of DOM, suggesting that river-estuary systems are important exporters of BC to the ocean through DOM. We show that BC comprises 4-7% of the dissolved organic carbon (DOC) at coastal ocean sites, which supports the hypothesis that the DOC pool is the intermediate reservoir in which BC ages prior to sedimentary deposition. Flux calculations suggest that BC could be as important as vascular plant-derived lignin in terms of carbon inputs to the ocean. Production of BC sequesters fossil fuel- and biomass-derived carbon into a refractory carbon pool. Hence, BC may represent a significant sink for carbon to the ocean.

  2. Fate of effluent organic matter during soil aquifer treatment: biodegradability, chlorine reactivity and genotoxicity.

    PubMed

    Quanrud, David M; Arnold, Robert G; Lansey, Kevin E; Begay, Carmen; Ela, Wendell; Gandolfi, A Jay

    2003-03-01

    Hydrophobic acid (HPO-A) and transphilic acid (TPI-A) fractions of dissolved organic matter (DOM) were isolated from a domestic secondary wastewater effluent that was polished via soil aquifer treatment (SAT). Fractions were isolated using XAD resin adsorption chromatography from samples obtained along the vadose zone flowpath at a full-scale basin recharge facility in Tucson, Arizona. Changes in isolate character during SAT were established via biodegradability (batch test), specific ultraviolet light absorbance (SUVA), trihalomethane formation potential (THMFP), and Ames mutagenicity assays. The dissolved organic carbon (DOC) concentration decreased by >90% during SAT. A significant fraction (up to 20%) of isolated post-SAT HPO-A was biodegradable. The (apparent) refractory nature of DOM that survives SAT may be a consequence of low DOC concentration in groundwater as well as the nature of the compounds themselves. Specific THMFP (microg THM per mg DOC) of HPO-A and TPI-A varied little as a consequence of SAT, averaging 52 and 49 microg THM per mg DOC, respectively. The nonbiodegradable fractions of HPO-A and TPI-A exhibited higher reactivities: 89 and 95 microg THM per mg DOC, respectively. Genotoxicity of HPO-A (on a per mass basis) increased after SAT, suggesting that responsible compounds are removed less efficiently than bulk organics during vadose zone transport. PMID:15384271

  3. Isotopic evidence for the contemporary origin of high-molecular weight organic matter in oceanic environments

    NASA Astrophysics Data System (ADS)

    Santschi, Peter H.; Guo, Laodong; Baskaran, M.; Trumbore, Susan; Southon, John; Bianchi, Thomas S.; Honeyman, Bruce; Cifuentes, Luis

    1995-02-01

    Previous work has suggested that apparent old 14C ages for oceanic DOC are the result of mixing of different organic carbon fractions. This report provides direct evidence for a contemporary 14C age of a high-molecular-weight (HMW) fraction of colloidal organic carbon (≥10 kD). Colloidal organic matter, COM 10 (from 10 kDaltons (kD) to 0.2 μm), isolated from the upper water column of the Gulf of Mexico and the Middle Atlantic Bight (MAB) region, generally has a contemporary age (i.e., younger than a few decades), while COM 1 (from 1 kD to 0.2 μm), is apparently old: 380-4500 y BP. Thus, BMW COM 10 (3-5% of DOC) from the upper water column is derived from living particulate organic matter (POM) and cycles rapidly, while a significant fraction of low-molecular-weight (≤1 kD) DOM is likely more refractory, and cycles on much longer time scales. The presence of pigment biomarker compounds in COM 1 from the upper water column points to selected phytoplankton species as one of the sources of COM. Terrestrial carbon as another source of COM is suggested from the inverse correlation between Δ 14C and δ 13C values, as well as the increasing δ 13C values with increasing salinity. 234Th-derived turnover times of COM 10 and COM 1 from both the Gulf of Mexico and MAB are consistently short, 1-20 and 3-30 days, respectively. These short residence times support the hypothesis that 14C ages of colloidal fractions of DOC are the result of COM fractions being a mixture of several endmembers with fast and slow turnover rates.

  4. The Relationship Between Dissolved Organic Matter Composition and Organic Matter Optical Properties in Freshwaters

    NASA Astrophysics Data System (ADS)

    Aiken, G.; Spencer, R. G.; Butler, K.

    2010-12-01

    Dissolved organic matter (DOM) chemistry and flux are potentially useful, albeit, underutilized, indicators of watershed characteristics, climate influences on watershed hydrology and soils, and changes associated with resource management. Source materials, watershed geochemistry, oxidative processes and hydrology exert strong influences on the nature and reactivity of DOM in aquatic systems. The molecules that comprise DOM, in turn, control a number of environmental processes important for ecosystem function including light penetration and photochemistry, microbial activity, mineral dissolution/precipitation, and the transport and reactivity of hydrophobic compounds and metals (e.g. Hg). In particular, aromatic molecules derived from higher plants exert strong controls on aquatic photochemistry, and on the transport and biogeochemistry of metals. Assessment of DOM composition and transport, therefore, can provide a basis for understanding watershed processes and biogeochemistry of rivers and streams. Here we present results of multi-year studies designed to assess the seasonal and spatial variability of DOM quantity and quality for 57 North American Rivers. DOM concentrations and composition, based on DOM fractionation on XAD resins, ultraviolet (UV)/visible absorption and fluorescence spectroscopic analyses, and specific compound analyses, varied greatly both between sites and seasonally within a given site. DOM in these rivers exhibited a wide range of concentration (<80 to >4000 µM C* L-1) and specific ultra-violet absorbance at 254 nm (SUVA254) (0.6 to 5 L *mg C-1 *m-1), an optical measurement that is an indicator of aromatic carbon content. In almost all systems, UV absorbance measured at specific wavelengths (e.g. 254 nm) correlated strongly with DOM and hydrophobic organic acid (HPOA) content (aquatic humic substances). The relationships between dissolved organic carbon (DOC) concentration and absorbance for the range of systems were quite variable due to

  5. Lyophilization and Reconstitution of Reverse Osmosis Concentrated Natural Organic Matter

    EPA Science Inventory

    Disinfection by-product (DBP) research can be complicated by difficulties in shipping large water quantities and changing natural organic matter (NOM) characteristics over time. To overcome these issues, it is advantageous to have a reliable method for concentrating and preservin...

  6. Forms and Bioavailability of Phosphorus Associated With Natural Organic Matter

    Technology Transfer Automated Retrieval System (TEKTRAN)

    Natural organic matter (NOM) is an important ingredient in soil which can improve physical, chemical, and biological properties of soils and nutrient supplies. In this study, we investigated the spectral features and potential availability of phosphorus (P) in the IHSS Elliott Soil humic acid standa...

  7. Organic Matter Balance: Managing for Soil Protection and Bioenergy Production

    Technology Transfer Automated Retrieval System (TEKTRAN)

    Soils are an important natural resource allowing the production of food, feed, fiber and fuel. The growing demand for these services or products requires we protect the soil resource. Many characteristics of high quality soils can be related to the quantity and quality of soil organic matter (organi...

  8. Relating Soil Organic Matter Dynamics to its Molecular Structure

    Technology Transfer Automated Retrieval System (TEKTRAN)

    Our understanding of the dynamics of soil organic matter (SOM) must be integrated with a sound knowledge of it biochemical complexity. The molecular structure of SOM was determined in 98% sand soils to eliminate the known protective effects of clay on the amount and turnover rate of the SOM constitu...

  9. Calculation of the enthalpy of formation of coal organic matter

    SciTech Connect

    A.M. Gyul'maliev; M.Ya. Shpirt

    2008-10-15

    The enthalpy of formation for the organic matter of coals in the coal rank series was calculated from the heat of the complete combustion reaction. Three variants were considered in which the experimental heating values and the values found from the correlation equation or calculated using the Mendeleev formula were taken as the heat of the complete combustion of coals.

  10. SOURCES OF FINE PARTICLE ORGANIC MATTER IN BOISE

    EPA Science Inventory

    Ambient concentrations of fine particle extracted organic matter (EOM) measured at the Elm Grove Park and Fire Station sites in Boise have been apportioned to their two principal sources, woodsmoke and motor vehicle emissions. A multiple linear regression method using lead and po...

  11. Organic matter in a coal ball: Peat or coal?

    USGS Publications Warehouse

    Hatcher, P.G.; Lyons, P.C.; Thompson, C.L.; Brown, F.W.; Maciel, G.E.

    1982-01-01

    Chemical analyses of morphologically preserved organic matter in a Carboniferous coal ball reveal that the material is coalified to a rank approximately equal to that of the surrounding coal. Hence, the plant tissues in the coal ball were chemically altered by coalification processes and were not preserved as peat. Copyright ?? 1982 AAAS.

  12. Photoproduction of Carbon Monoxide from Natural Organic Matter

    EPA Science Inventory

    Pioneering studies by Valentine provided early kinetic results that used carbon monoxide (CO) production to evaluate the photodecomposition of aquatic natural organic matter (NOM) . (ES&T 1993 27 409-412). Comparatively few kinetic studies have been conducted of the photodegradat...

  13. Quenching and Sensitizing Fullerene Photoreactions by Natural Organic Matter

    EPA Science Inventory

    Effects of natural organic matter (NOM) on the photoreaction kinetics of fullerenes (i.e., C60 and fullerenol) were investigated using simulated sunlight and monochromatic radiation (365 nm). NOM from several sources quenched (slowed) the photoreaction of C60 aggregates in water ...

  14. Protection of Organic Matter from Enzyme Degradation by Mineral Mesopores

    NASA Astrophysics Data System (ADS)

    Zimmerman, A. R.; Chorover, J. D.; Brantley, S. L.

    2003-12-01

    Mineral mesopores (2-50 nm diameter) may sequester organic matter (natural and pollutant) and protect it from microbial and fungal enzymatic degradation in soils and sediments. Synthetic mesoporous alumina and silica minerals with uniform pore sizes and shapes were used to test the role of mesopores in protecting organic matter from enzymatic degradation. A model humic compound, L-3-4-dihydroxyphenylalanine (L-DOPA), was sorbed to the internal surfaces of mesoporous alumina (8.2 nm diameter pores) and mesoporous silica (3.4 nm diameter pores) as well as to the external surfaces of nonporous alumina and silica analogues. A fungal derived enzyme, laccase, was added to these sorbate-sorbent pairs in aqueous solution and activity was monitored by oxygen consumption. Though enzyme activity was suppressed in both cases by mineral-enzyme interaction (enzyme inhibition likely due to adsorption of the enzyme), both the rate and total extent of enzyme-mediated degradation of mesopore-sorbed L-DOPA was 3-40 times lower than that of the externally-sorbed analogue. These results provide, for the first time, direct evidence for the viability of the proposed mesopore protection mechanism for the sequestration and preservation of sedimentary organic matter and organic contaminants. Mesopore adsorption/desorption phenomena may also help explain the slow degradation of organic contaminants in soil and sediment and may prove useful as delivery vehicles for organic compounds to agricultural, medical or environmental systems.

  15. Isotopic composition of pyrite: Relationship to organic matter type and iron availability in some North American cretaceous shales

    USGS Publications Warehouse

    Gautier, D.L.

    1987-01-01

    The S isotope composition of pyrite in Cretaceous shales from the Western Interior of North America is related to organic C abundance, kerogen type and Fe availability. Both calcareous and noncalcareous rocks show a correlation between S and C, but noncalcareous rocks are relatively enriched in S with a higher S C ratio. This higher ratio probably shows that pyrite formation was Fe limited in the calcareous rocks. Organic-carbon-rich noncalcareous shales accumulated slowly beneath anoxic bottom waters. The anoxic bottom waters allowed hydrogen-rich organic matter to be preserved. Such shales have a narrow range of 34S-depleted sulfide and have Fe S ratios like stoichiometric pyrite, suggesting that pyrite formation in organic-rich shales was also limited by Fe availability. Conversely, organic-poor shales commonly accumulated at comparatively high rates, contain hydrogen-poor and refractory organic matter, and have a wide range of pyrite-S isotopic compositions. These organic-poor shales contain post-sulfidic authigenic minerals such as siderite and have excess reactive Fe rather than pyrite stoichiometry. Evidently Fe played a large role in early diagenesis and determined the course of post-sulfidic diagenesis. Fe availability was, however, mainly controlled by provenance, by the rates of sediment accumulation, and by the oxygen content of the depositional environment. ?? 1987.

  16. CHROMOPHORIC DISSOLVED ORGANIC MATTER (CDOM) DERIVED FROM DECOMPOSITION OF VARIOUS VASCULAR PLANT AND ALGAL SOURCES

    EPA Science Inventory

    Chromophoric dissolved organic (CDOM) in aquatic environments is derived from the microbial decomposition of terrestrial and microbial organic matter. Here we present results of studies of the spectral properties and photoreactivity of the CDOM derived from several organic matter...

  17. Organic and Inorganic Matter in Louisiana Coastal Waters: Vermilion, Atchafalaya, Terrebonne, Barataria, and Mississippi Regions.

    EPA Science Inventory

    Chromophoric dissolved organic matter (CDOM) spectral absorption, dissolved organic carbon (DOC) concentration, and the particulate fraction of inorganic (PIM) and organic matter (POM) were measured in Louisiana coastal waters at Vermilion, Atchafalaya, Terrebonne, Barataria, and...

  18. Molecular characterization of soil organic matter: a historic overview

    NASA Astrophysics Data System (ADS)

    Kögel-Knabner, Ingrid; Rumpel, Cornelia

    2014-05-01

    The characterization of individual molecular components of soil organic matter started in the early 19th century, but proceeded slowly. The major focus at this time was on the isolation and differentiation of different humic and fulvic acid fractions, which were considered to have a defined chemical composition and structure. The isolation and structural anlysis of specific individual soil organic matter components became more popular in the early 20th century. In 1936 40 different individual compounds had been isolated and a specific chemical strucutre had been attributed. These structural attributions were confirmed later for some, but not all of these individual compounds. In the 1950 much more individual compounds could be isolated and characterized, using complicated and time consuming chromatography. It became obvious that soil also contains a number of compounds of microbial origin, such as e.g., amino sugars and lipids. With the improvement of chrmoatographic separation techniques and the use of gas chromatography in combination with thin layerchromatography in the 1960 hundreds of individual compounds have been isolated and identified, most of them after chemical degradation of humic or fulvic acids. The chemical degradative techniques were amended with analytical pyrolysis in the 1970s. More and more, bulk soil organic matter was analyzed with these techniques and the advent of solid-stae 13C NMR spectroscopy around the 1980s allowed for the characterization of the composition of bulk soil organic matter. The gas chromatographic separation of organic matter can nowadays be combined with specific detectors, such that specific attributes ofindividual molecules can be analyzed, e.g. the radiocarbon content or the stable isotope composition.

  19. Identification and Characterization of Early Solar system Organic Matter Preserved in Chondritic Porous Interplanetary Dust Particles

    NASA Astrophysics Data System (ADS)

    Flynn, George; Wirick, Sue; Keller, Lindsay

    2015-04-01

    alternate model where carbon-bearing ices condense on the surfaces of grains, the ices are irradiated by ionizing radiation, and subsequent heating removes the ices leaving more refractory organic matter on the grain surfaces, as described by Bernstein et al. [4]. In one case we obtained C-, N-, and O-XANES spectra on the rim material. The O-XANES confirmed the presence of C=O. We found high N:C and O:C ratios that plot on the extension of the N:C vs. O:C correlation line, found in analysis of meteoritic organic matter [5], towards even more primitive organic matter than found in any meteorite. The organic rims are too thin for μ-FTIR spectroscopy, which is diffraction limited to about the wavelength/2, or ~2 μm for the aliphatic C-H stretching features. However, mid-infrared spectra obtained on CP IDPs show the presence of aliphatic C-H, C=O, C-C, and O-H, as well as crystalline and amorphous silicates [6]. Aromatic C-H is rarely detected in CP IDPs. Neither the organic rims nor the bulk organic matter in CP IDPs show the graphite exciton feature, whose strength in meteorite organic matter correlates with increasing parent body thermal metamorphism [7], indicating the organic matter in CP IDPs experienced minimal metamorphism after it formed. The spectra show variation in the aliphatic -C-H2- to -C-H3 and C=O to aliphatic C-H ratios from spot to spot on the same particle. C-XANES of ultramicrotome sections of CP IDPs also show significant variability, particularly in the C=O to C=C ratio. Variability in the C-XANES and the mid-infrared spectra indicates the organic matter in primitive CP IDPs consists of several compositionally distinct components. Our C-XANES and μ-FTIR results indicate the organic matter in CP IDPs is extremely primitive and that much of the pre-biotic organic matter of our Solar System formed early in the evolution of the Solar Nebula, by a process that preceded parent body aqueous processing. References: [1] Ishii, H. A. et al. (2008) Science, 319

  20. Cumulative effects of biochar, mineral and organic fertilizers on soil organic matter

    NASA Astrophysics Data System (ADS)

    Plaza, César; López-de-Sá, Esther G.; Gascó, Gabriel; Méndez, Ana; Zaccone, Claudio

    2016-04-01

    We investigated the effect of three consecutive annual applications of biochar at rates of 0 and 20 t ha-1, in a factorial combination with a mineral fertilizer (NPK and nitrosulfate) and two types of organic amendment (municipal solid waste compost and sewage sludge), on soil organic matter in a field experiment under Mediterranean conditions. Biochar increased significantly soil organic C content and C/N ratio. In biochar-amended soils, soil organic C increased significantly with the addition of municipal solid waste compost and sewage sludge. To capture organic matter protection mechanisms related to aggregation and mineral interaction, the soil samples will be fractionated into free (unprotected), intra-macroaggregate, intra-microaggregate, and mineral-associated organic matter pools, and the isolated fractions will be subjected to further chemical and spectroscopic analysis.

  1. Natural Organic Matter as Global Antennae for Primary Production

    PubMed Central

    Van Trump, J. Ian; Rivera Vega, Fransheska J.

    2013-01-01

    Abstract Humic substances (HS) are high-molecular-weight complex refractory organics that are ubiquitous in terrestrial and aquatic environments. While resistant to microbial degradation, these compounds nevertheless support microbial metabolism via oxidation or reduction of their (hydro)quinone moieties. As such, they are known to be important electron sinks for respiratory and fermentative bacteria and electron sources for denitrifying and perchlorate-reducing bacteria. HS also strongly promote abiotic reduction of Fe(III) when irradiated with light. Here, we show that HS-enhanced Fe(III) photoreduction can also drive chemolithotrophic microbial respiration by producing Fe(II), which functions as a respiratory electron donor. Due to their molecular complexity, HS absorb most of the electromagnetic spectrum and can act as broad-spectrum antennae converting radiant energy into bioavailable chemical energy. The finding that chemolithotrophic organisms can utilize this energy has important implications for terrestrial, and possibly extraterrestrial, microbial processes and offers an alternative mechanism of radiation-driven primary productivity to that of phototrophy. Key Words: Deep subsurface biosphere—Chemolithotrophic microorganisms—Organic matter—Geochemistry—Iron-oxidizing bacteria. Astrobiology 13, 476–482. PMID:23683047

  2. Bacterial biomarkers thermally released from dissolved organic matter

    USGS Publications Warehouse

    Greenwood, P.F.; Leenheer, J.A.; McIntyre, C.; Berwick, L.; Franzmann, P.D.

    2006-01-01

    Hopane biomarker products were detected using microscale sealed vessel (MSSV) pyrolysis gas chromatography-mass spectrometry (GC-MS) analysis of dissolved organic matter from natural aquatic systems colonised by bacterial populations. MSSV pyrolysis can reduce the polyhydroxylated alkyl side chain of bacteriohopanepolyols, yielding saturated hopane products which are more amenable to GC-MS detection than their functionalised precursors. This example demonstrates how the thermal conditions of MSSV pyrolysis can reduce the biologically-inherited structural functionality of naturally occurring organic matter such that additional structural fragments can be detected using GC methods. This approach complements traditional analytical pyrolysis methods by providing additional speciation information useful for establishing the structures and source inputs of recent or extant organic material. ?? 2006.

  3. Pre-biotic organic matter from comets and asteroids

    NASA Technical Reports Server (NTRS)

    Anders, Edward

    1989-01-01

    Only meteoritic fragments small enough to be gently decelerated by the atmosphere (10 to the -12th g to 10 to the -6th g) can deliver organic matter intact. The amount of such 'soft-landed' organic carbon can be estimated from data for the infall rate of meteoritic matter. At present rates, only about 0.0006 g/sq cm intact organic carbon would accumulate in 100 million years, but at the higher rates of about four billion yr ago, about 20 g/sq cm may have accumulated in the few hundred million years between the last cataclysmic impact and the beginning of life. It may have included some biologically important compounds that did not form by abiotic synthesis on earth.

  4. Evalution of soil organic matter contents using spectral inhance indeces

    NASA Astrophysics Data System (ADS)

    Faghih, Athar; Heidari, Ahmad

    2010-05-01

    Topography composed of elevation, slope, and aspect, that through the influence microclimate and chemical and physical properties of land affects the amount of organic carbon. Because of the height difference between hydrology and temperature regime in mountainous regions are collaborating and that difference has led to differences in the composition and distribution patterns of vegetation, the soil and organic matter decomposition rate is. Effect of climate change on soil organic carbon storage and its distribution is different in different regions, and the main factors creating differences, temperature and rainfall levels are on the order and the growth rate plant species and organic carbon mineralization rate impact.to evaluate these factors first ETM+ satellite images of 2002 North range lands, Karaj river basin prepared, then image processing and image classification as supervision and unsupervision was done. Then NDVI, TNDVI, VI, IR/R, Square IR/R indices obtained for study area and on the basis of these indices study area units was specified. Digital elevation model (DEM) using the region as a 1:50000 topographic map was produced before. Using Arc- GIS image and maps physiographic, location sampling based physiographic units changes and temperature change with the opposite slope directions sample have been made. By using GPS, 24 positions for surface samples and 4 pedons determined and sampled. Physical and chemical sample properties have based on size and by using dry sieve and OC, N and C/N ratio respectively specified in them. Then, using Exel software existing relationships between different parameters were studied. The results showed that, with increases. In the slope of the north and west due to the ability to maintain more moisture, have organic matter, more than the southern and eastern slopes. Correlation coefficients obtained included: correlation coefficient between organic matter and elevation 0.84, correlation coefficient between organic matter

  5. Submicron Organic Matter in a Peri-alpine, Ultra-oligotrphic Lake

    SciTech Connect

    Chanudet,V.; Filella, M.

    2007-01-01

    Combining organic carbon (OC) measurements with the classic MBTH (3-methyl-2-benzothiazolinone hydrochloride) method for carbohydrate determination and a new voltammetric method for the determination of refractory organic matter (ROM) made it possible, for the first time, to quantify the types, sources and fate of submicron organic matter present in an ultra-oligotrophic lake (Lake Brienz, Switzerland). The lake is extremely rich in suspended glacial flour in summer (glacier melting season). Measurements were taken from June 2004 to October 2005 from 1.2 {mu}m filtered samples. OC concentration remained extremely low throughout the year (below 1 mg C L{sup -1}). MBTH carbohydrate concentration was very low in the lake (0.06-0.43 mg C L{sup -1}) and in the two tributary rivers (0.06-0.25 mg C L{sup -1}). Lake carbohydrate concentration only correlated with phytoplanktonic biomass at the onset of the productivity period. The results suggest that differences in MBTH concentration may sometimes reflect differences in the nature of the carbohydrates rather than differences in carbon concentration. Extensive fibril formation was evidenced by transmission electron microscopy (TEM) observations. ROM concentration in the lake was also very low (0.1-0.2 mg C L{sup -1}). Significant variation in ROM riverine input was due to either annual occurrences (snow melting) or irregular episodes (floods). Melting snow was responsible for about 30% of the lake's annual ROM input. One box mass balance calculations showed that about 25% of ROM was lost within the lake. Evidence gleaned from TEM and STXM (scanning transmission X-ray microscopy) observations clearly indicates that this is mainly caused by ROM sedimentation after association with inorganic colloids.

  6. Loss of organic matter from riverine particles in deltas

    SciTech Connect

    Keil, R.G.; Quay, P.D.; Richey, J.E.

    1997-04-01

    In order to examine the transport and burial of terrigenous organic matter along the coastal zones of large river systems, we assessed organic matter dynamics in coupled river/delta systems using mineral surface area as a conservative tracer for discharged riverine particulate organic matter (POM). Most POM in the rivers studied (n = 6) is tightly associated with suspended mineral materiaL e.g., it is sorbed to mineral surfaces. Average organic loadings in the Amazon River (0.67 - 0.14 Mg C m{sup -2}), the river for which we have the largest dataset, are approximately twice that of sedimentary minerals from the Amazon Delta (-0.35 mg C m{sup -2}). Stable carbon isotope analysis indicate that approximately two-thirds of the total carbon on the deltaic particles is terrestrial. The combined surface-normalized, isotope-distinguished estimate is that >70% of the Amazon fluvial POM is not buried in the delta consistent with other independent evidence. Losses of terrestrial POM have also been quantified for the river/delta systems of Columbia in the USA, Fly in New Guinea. and Huange-He in China. If the losses of riverine POM observed in these river/delta systems are representative of rivers worldwide, then the surface-constrained analyses point toward a global loss of fluvial POM in delta regions of {approximately}0.1 x 10{sup 15} g C y{sup -1}. 28 refs., 2 figs., 1 tab.

  7. Rare earth elements and neodymium isotopes in sedimentary organic matter

    NASA Astrophysics Data System (ADS)

    Freslon, Nicolas; Bayon, Germain; Toucanne, Samuel; Bermell, Sylvain; Bollinger, Claire; Chéron, Sandrine; Etoubleau, Joel; Germain, Yoan; Khripounoff, Alexis; Ponzevera, Emmanuel; Rouget, Marie-Laure

    2014-09-01

    We report rare earth element (REE) and neodymium (Nd) isotope data for the organic fraction of sediments collected from various depositional environments, i.e. rivers (n = 25), estuaries (n = 18), open-ocean settings (n = 15), and cold seeps (n = 12). Sedimentary organic matter (SOM) was extracted using a mixed hydrogen peroxide/nitric acid solution (20%-H2O2-0.02 M-HNO3), after removal of carbonate and oxy-hydroxide phases with dilute hydrochloric acid (0.25 M-HCl). A series of experimental tests indicate that extraction of sedimentary organic compounds using H2O2 may be complicated occasionally by partial dissolution of sulphide minerals and residual carbonates. However, this contamination is expected to be minor for REE because measured concentrations in H2O2 leachates are about two-orders of magnitude higher than in the above mentioned phases. The mean REE concentrations determined in the H2O2 leachates for samples from rivers, estuaries, coastal seas and open-ocean settings yield relatively similar levels, with ΣREE = 109 ± 86 ppm (mean ± s; n = 58). The organic fractions leached from cold seep sediments display even higher concentration levels (285 ± 150 ppm; mean ± s; n = 12). The H2O2 leachates for most sediments exhibit remarkably similar shale-normalized REE patterns, all characterized by a mid-REE enrichment compared to the other REE. This suggests that the distribution of REE in leached sedimentary organic phases is controlled primarily by biogeochemical processes, rather than by the composition of the source from which they derive (e.g. pore, river or sea-water). The Nd isotopic compositions for organic phases leached from river sediments are very similar to those for the corresponding detrital fractions. In contrast, the SOM extracted from marine sediments display εNd values that typically range between the εNd signatures for terrestrial organic matter (inferred from the analysis of the sedimentary detrital fractions) and marine organic matter

  8. Natural organic matter as global antennae for primary production.

    PubMed

    Van Trump, J Ian; Rivera Vega, Fransheska J; Coates, John D

    2013-05-01

    Humic substances (HS) are high-molecular-weight complex refractory organics that are ubiquitous in terrestrial and aquatic environments. While resistant to microbial degradation, these compounds nevertheless support microbial metabolism via oxidation or reduction of their (hydro)quinone moieties. As such, they are known to be important electron sinks for respiratory and fermentative bacteria and electron sources for denitrifying and perchlorate-reducing bacteria. HS also strongly promote abiotic reduction of Fe(III) when irradiated with light. Here, we show that HS-enhanced Fe(III) photoreduction can also drive chemolithotrophic microbial respiration by producing Fe(II), which functions as a respiratory electron donor. Due to their molecular complexity, HS absorb most of the electromagnetic spectrum and can act as broad-spectrum antennae converting radiant energy into bioavailable chemical energy. The finding that chemolithotrophic organisms can utilize this energy has important implications for terrestrial, and possibly extraterrestrial, microbial processes and offers an alternative mechanism of radiation-driven primary productivity to that of phototrophy. PMID:23683047

  9. Degradation of refractory dibutyl phthalate by peroxymonosulfate activated with novel catalysts cobalt metal-organic frameworks: Mechanism, performance, and stability.

    PubMed

    Li, Huanxuan; Wan, Jinquan; Ma, Yongwen; Wang, Yan; Chen, Xi; Guan, Zeyu

    2016-11-15

    In this work, a new effective and relatively stable heterogeneous catalyst of Metal-Organic Framework Co3(BTC)2·12H2O (Co-BTC) has been synthesized and tested to activate peroxymonosulfate (PMS) for removal of refractory dibutyl phthalate (DBP). Co-BTC(A) and Co-BTC(B) were synthesized by different methods, which resulted in different activity towards PMS. The results indicated that Co-BTC(A) showed better performance on DBP degradation. The highest degradation rate of 100% was obtained within 30min. The initial pH showed respective level on DBP degradation with a rank of 5.0>2.75>9.0>7.0>11.0 in PMS/Co-BTC(A) system. No remarkable reduction of DBP was observed in the catalytic activity of Co-BTC(A) at 2nd run as demonstrated by recycling. However, the DBP degradation efficiency decreased by 8.26%, 10.9% and 25.6% in the 3rd, 4th, and 5th runs, respectively. The loss of active catalytic sites of Co(II) from Co-BTC(A) is responsible for the activity decay. Sulfate radicals (SO4(-)) and hydroxyl radicals (OH) were found at pH 2.75. Here, we propose the possible mechanism for activation of PMS by Co-BTC(A), which is involved in homogeneous and heterogeneous reactions in the solutions and the surface of Co-BTC(A), respectively. PMID:27420387

  10. Microbial decomposition of terrigenic organic matter discharged into the Baltic Sea

    NASA Astrophysics Data System (ADS)

    Manecki, M.; Herlemann, D.; Pollehne, F.; Labrenz, M.; Zimmermann, R.; Dittmar, T.; Schulz-Bull, D.; Jürgens, K.

    2012-04-01

    The permafrost soils in arctic regions contain a large amount of the worldwide organic carbon and global warming is expected to increase drainage of dissolved organic matter (DOM) into the adjacent oceans. It is yet unclear how this terrigenic organic matter will influence the global carbon cycle and the feedback effects to the climate. We used the Baltic Sea as a model system to investigate the role of abiotic factors on the degradation of terrigenic dissolved organic matter (tDOM) upon discharge into a brackish system as well as the response of the microbial community. Water from the Kalix River in Northern Sweden, which drains also permafrost soils, was used as the tDOM source in incubation experiments with Baltic Sea water. Different qualities of tDOM were compared by applying concentration procedures: tDOM was added to fresh Baltic Sea water as untreated Kalix River water or concentrated by commonly use DOC concentration procedures (lyophilization, ultrafiltration, solid phase extraction). We investigated the TDOC degradation by parallel measurements of dissolved organic carbon (DOC) consumption, DOM composition (using a 15 Tesla Fourier Transformation Ion Cyclotron Resonance Mass Spectrometer (FT-ICR-MS)), microbial activities and microbial community structure. FT-ICR-MS measurements showed qualitative differences in the DOM compositions for the different treatments and a drastic change in DOM composition between the third and fourth week of the incubation experiment. Despite the qualitative differences in DOM composition, the results obtained so far revealed that the added tDOC had, independent of the previous enrichment procedure, only little influence on bacterial activities, bacterial community structure and DOC decomposition dynamics. This indicates that the major portion of the added tDOC is of refractory nature. Instead, bacterial predation by heterotrophic protists had a strong impact on both bacterial community structure and DOC decomposition

  11. Relating hygroscopicity and composition of organic aerosol particulate matter

    SciTech Connect

    Duplissy, J.; DeCarlo, P. F.; Dommen, J.; Alfarra, M. R.; Metzger, A.; Barmpadimos, I.; Prevot, A. S. H.; Weingartner, E.; Tritscher, T.; Gysel, M.; Aiken, A. C.; Jimenez, J. L.; Canagaratna, M. R.; Worsnop, D. R.; Collins, D. R.; Tomlinson, J.; Baltensperger, U.

    2011-01-01

    A hygroscopicity tandem differential mobility analyzer (HTDMA) was used to measure the water uptake (hygroscopicity) of secondary organic aerosol (SOA) formed during the chemical and photochemical oxidation of several organic precursors in a smog chamber. Electron ionization mass spectra of the non-refractory submicron aerosol were simultaneously determined with an aerosol mass spectrometer (AMS), and correlations between the two different signals were investigated. SOA hygroscopicity was found to strongly correlate with the relative abundance of the ion signal m/z 44 expressed as a fraction of total organic signal (f44). m/z 44 is due mostly to the ion fragment CO2+ for all types of SOA systems studied, and has been previously shown to strongly correlate with organic O/C for ambient and chamber OA. The analysis was also performed on ambient OA from two field experiments at the remote site Jungfraujoch, and the megacity Mexico City, where similar results were found. A simple empirical linear relation between the hygroscopicity of OA at subsaturated RH, as given by the hygroscopic growth factor (GF) or "κorg" parameter, and f44 was determined and is given by κorg = 2.2 × f44 - 0.13. This approximation can be further verified and refined as the database for AMS and HTDMA measurements is constantly being expanded around the world. Finally, the use of this approximation could introduce an important simplification in the parameterization of hygroscopicity of OA in atmospheric models, since f44 is correlated with the photochemical age of an air mass.

  12. Refractory organic pollutants and toxicity in pulp and paper mill wastewaters.

    PubMed

    Lindholm-Lehto, Petra C; Knuutinen, Juha S; Ahkola, Heidi S J; Herve, Sirpa H

    2015-05-01

    This review describes medium and high molecular weight organic material found in wastewaters from pulp and paper industry. The aim is to review the versatile pollutants and the analysis methods for their determination. Among other pollutants, biocides, extractives, and lignin-derived compounds are major contributors to harmful effects, such as toxicity, of industrial wastewaters. Toxicity of wastewaters from pulp and paper mills is briefly evaluated including the methods for toxicity analyses. Traditionally, wastewater purification includes mechanical treatment followed by chemical and/or biological treatment processes. A variety of methods are available for the purification of industrial wastewaters, including aerobic and anaerobic processes. However, some fractions of organic material, such as lignin and its derivatives, are difficult to degrade. Therefore, novel chemical methods, including electrochemical and oxidation processes, have been developed for separate use or in combination with biological treatment processes. PMID:25647495

  13. Photochemical Degradation of Persistent Organic Pollutants: A Study of Ice Photochemistry Mediated by Dissolved Organic Matter

    NASA Astrophysics Data System (ADS)

    Bobby, R.; Pagano, L.; Grannas, A. M.

    2012-12-01

    It is well established that ice is a reactive medium in the environment and that active photochemistry occurs in frozen systems. Snow and ice contain a number of absorbing species including nitrate, peroxide and organic matter. Upon irradiation, they can generate a variety of reactive intermediates such as hydroxyl radical and singlet oxygen. It has been shown that dissolved organic matter is a ubiquitous component of snow and ice and plays an important role in overall light absorption properties of the sample. Additionally, the reactive intermediates produced can further react with contaminants present and alter their fate in the environment. Unfortunately, the role of dissolved organic matter in ice photochemistry has received little attention. Here we present results from laboratory-based studies aimed at elucidating the role of dissolved organic matter photochemistry on contaminant degradation in ice. Aqueous samples of our target pollutant, aldrin (20 μg/L), in liquid and frozen phases, were irradiated under Q-Panel 340 lamps to simulate the UV radiation profile of natural sunlight. Results indicated that frozen samples degraded more quickly than liquid samples and that the addition of dissolved organic matter increases the aldrin degradation rate significantly. Both terrestrial (Suwannee River, U.S.) and microbial sources (Pony Lake, Antarctica) of DOM were able to sensitize aldrin loss in ice. Scavengers of singlet oxygen, such as furfuryl alcohol and β-carotene, were also added to DOM solutions. Based on the type of organic matter present, the scavengers had different effects on the photochemical degradation of aldrin. Our results indicate that natural organic matter present in ice is an important component of ice photochemical processes.

  14. Oxytetracycline sorption to organic matter by metal-bridging.

    PubMed

    MacKay, Allison A; Canterbury, Brian

    2005-01-01

    The sorption of oxytetracycline to metal-loaded ion exchange resin and to natural organic matter by the formation of ternary complexes between polyvalent metal cations and sorbent- and sorbate ligand groups was investigated. Oxytetracycline (OTC) sorption to Ca- and Cu-loaded Chelex-100 resin increased with increasing metal/sorbate ratio at pH 7.6 (OTC speciation: 55% zwitterion, 45% anion). Greater sorption to Cu- than Ca-loaded resin was observed, consistent with the greater stability constants of Cu with both the resin sites and with OTC. Oxytetracycline sorption to organic matter was measured at pH 5.5 (OTC speciation: 1% cation, 98% zwitterion, 1% anion). No detectable sorption was measured for cellulose or lignin sorbents that contain few metal-complexing ligand groups. Sorption to Aldrich humic acid increased from "clean" < "dirty" (no cation exchange pretreatment) < Al-amended < Fe(III)-amended clean humic acid with K(d) values of 5500, 32000, 48000, and 250000 L kg(-1) C, respectively. Calcium amendments of clean humic acid suggested that a portion of the sorbed OTC was interacting by cation exchange. Oxytetracycline sorption coefficients for all humic acid sorbents were well-correlated with the total sorbed Al-plus-Fe(III) concentrations (r(2) = 0.87, log-log plot), suggesting that sorption by ternary complex formation with humic acid is important. Results of this research indicate that organic matter may be an important sorbent phase in soils and sediments for pharmaceutical compounds that can complex metals by the formation of ternary complexes between organic matter ligand groups and pharmaceutical ligand groups. PMID:16221815

  15. Organic matter and benthic metabolism in Lake Illawarra, Australia

    NASA Astrophysics Data System (ADS)

    Qu, Wenchuan; Morrison, R. J.; West, R. J.; Su, Chenwei

    2006-10-01

    Carbon and nitrogen contents (total organic carbon and total nitrogen), chlorophyll-a concentrations in surface sediments and benthic sediment-water fluxes of oxygen and carbon dioxide were investigated at five stations in Lake Illawarra (Australia) to compare the sources/quality of sedimentary organic matter and the characteristics of diagenesis and benthic biogeochemical processes for different primary producers (e.g., seagrass, microphytobenthos and macroalgae) and/or sediment types (sand or mud). The unvegetated sediments showed lower C/N ratios (with the lowest value occurring in the deep organic-rich muddy site) than the seagrass ( Ruppia or Zostera) beds, which may be due to the contribution of microalgae (mainly diatoms) to the sedimentary organic matter pool. This was also supported by the detection of microalgal pigments in the bare sediments. On an annual basis, seagrass beds exhibited the highest gross primary productivity (O 2 or TCO 2 fluxes), while the lowest rates occurred in the deep central basin of the Lake. Seasonally, there was a general trend of highest production in spring or summer, and lowest production in winter or autumn. Organic carbon oxidation scenarios, evaluated by either calcium carbonate dissolution or sulfate reduction models, indicated that both models can explain organic matter mineralization. Trophic status was evaluated using different indices including benthic trophic state index, net O 2 fluxes and P/ R ratios for Lake Illawarra, which led to similar trophic classifications in general, and also the same trends in spatial and seasonal variations. Overall, these data indicated that the Lake was heterotrophic on an annual basis, as the total community carbon respiration exceeded production, and this supported an earlier LOICZ mass balance/stoichiometric modelling conclusion.

  16. Temperature sensitivity of organic-matter decay in tidal marshes

    USGS Publications Warehouse

    Kirwan, Matthew L.; Guntenspergen, Glenn R.; Langley, J.A.

    2014-01-01

    Approximately half of marine carbon sequestration takes place in coastal wetlands, including tidal marshes, where organic matter contributes to soil elevation and ecosystem persistence in the face of sea-level rise. The long-term viability of marshes and their carbon pools depends, in part, on how the balance between productivity and decay responds to climate change. Here, we report the sensitivity of labile soil organic-matter decay in tidal marshes to seasonal and latitudinal variations in temperature measured over a 3-year period. We find a moderate increase in decay rate at warmer temperatures (3-6% per °C, Q10 = 1.3-1.5). Despite the profound differences between microbial metabolism in wetlands and uplands, our results indicate a strong conservation of temperature sensitivity. Moreover, simple comparisons with organic-matter production suggest that elevated atmospheric CO2 and warmer temperatures will accelerate carbon accumulation in marsh soils, and potentially enhance their ability to survive sea-level rise.

  17. Flocculation of Clay and Organic Matter in Turbid Salt Water

    NASA Astrophysics Data System (ADS)

    Reed, A. H.; Yin, H.; Zhang, G.; Tan, X.; Furukawa, Y.

    2010-12-01

    Sediment transport and deposition in estuaries and tidal flats are often dominated by the aggregation of clay and organic matter into composite particles or “flocs”. The stability of the flocs is important in determining the distance over which the sediment is transported and the areas to which the sediment is deposited. During floc transport from riverine to oceanic environments, stability is determined by suspended sediment concentrations, sediment types, organic matter type, fluid flow rates and small scale turbulence. In a series of laboratory experiments, interactions between clay sediments and organic matter were evaluated within a flow column that was filled with saline water. The focus of this investigation was on changes in floc size, density and strength as flow velocities and turbulent stresses were altered. Significant changes in the floc shape, consolidation, density and behavior were determined for flow rates and Reynolds numbers that are common to riverine environments. The variability in floc composition was also shown to influence bulk sediment properties: heat transport, acoustic propagation and shear strength, while sediments were entrained in high-density suspensions and low-density deposits.

  18. Methylmercury production in estuarine sediments: role of organic matter

    PubMed Central

    Schartup, Amina T.; Mason, Robert P.; Balcom, Prentiss H.; Hollweg, Terill A.; Chen, Celia Y.

    2013-01-01

    Methylmercury (MeHg) affects wildlife and human health mainly through marine fish consumption. In marine systems, MeHg is formed from inorganic mercury (HgII) species primarily in sediments then accumulates and biomagnifies in the food web. Most of the fish consumed in the US are from estuarine and marine systems highlighting the importance of understanding MeHg formation in these productive regions. Sediment organic matter has been shown to limit mercury methylation in estuarine ecosystems, as a result it is often described as the primary control over MeHg production. In this paper, we explore the role of organic matter by looking at the effects of its changing sediment concentrations on the methylation rates across multiple estuaries. We measured sedimentary MeHg production at eleven estuarine sites that were selected for their contrasting biogeochemical characteristics, mercury (Hg) content, and location in the Northeastern US (ME, NH, CT, NY, and NJ). Sedimentary total Hg concentrations ranged across five orders of magnitude, increasing in concentration from the pristine, sandy sediments of Wells (ME), to industrially contaminated areas like Portsmouth (NH) and Hackensack (NJ). We find that methylation rates are the highest at locations with high Hg content (relative to carbon), and that organic matter does not hinder mercury methylation in estuaries. PMID:23194318

  19. Inferring semantic organization from refractory access dysphasia: further replication in the domains of geography and proper nouns but not concrete and abstract concepts.

    PubMed

    Hamilton, A Cris; Martin, Randi C

    2010-12-01

    Patients with "refractory access dysphasia" have been a source of unique insight into the organization of previously unexplored domains of semantic knowledge (i.e., proper nouns, geography, concrete and abstract concepts). However, much of the relevant data have been based on the performance of a small number of patients. Here, we present 2 patients who both display a "refractory access" pattern of performance on spoken-word-written-word matching tasks and test their performance in the domains of famous people, geography, and abstract and concrete words. While these patients show performance similar to that for the previously reported patients in the domains of famous people and geography, they show a very different pattern of performance with abstract and concrete nouns. We discuss possible reasons why patients may differ in performance and evidence for and against the "differential frameworks" hypothesis for the organization of concrete and abstract concepts. PMID:22074471

  20. Comments on D/H ratios in chondritic organic matter

    NASA Astrophysics Data System (ADS)

    Smith, J. W.; Rigby, D.

    1981-06-01

    D/H ratios in chondritic organic matter are investigated. Demineralized organic residues obtained from previous experiments were dried in a quartz reaction vessel under vacuum for 60 minutes at 250-300 C and then combusted in oxygen for 20 minutes at 850 C. The apparatus is described and the results of the experiments such as D/H ratios in water and measurements on total carbon dioxide are given. Atomic H/C ratios calculated directly from the quantities of carbon dioxide and water recovered, are reported according to Standard Mean Ocean Water and Pee Dee Belemnite, using the customary notation.

  1. Carbon isotopic studies of organic matter in Precambrian rocks.

    NASA Technical Reports Server (NTRS)

    Oehler, D. Z.; Schopf, J. W.; Kvenvolden, K. A.

    1972-01-01

    A survey has been undertaken of the carbon composition of the total organic fraction of a suite of Precambrian sediments to detect isotopic trends possibly correlative with early evolutionary events. Early Precambrian cherts of the Fig Tree and upper and middle Onverwacht groups of South Africa were examined for this purpose. Reduced carbon in these cherts was found to be isotopically similar to photosynthetically produced organic matter of younger geological age. Reduced carbon in lower Onverwacht cherts was found to be anomalously heavy; it is suggested that this discontinuity may reflect a major event in biological evolution.

  2. Organic matter in meteorites and comets - Possible origins

    NASA Technical Reports Server (NTRS)

    Anders, Edward

    1991-01-01

    At least six extraterrestrial environments may have contributed organic compounds to meteorites and comets: solar nebula, giant-planet subnebulae, asteroid interiors containing liquid water, carbon star atmospheres, and diffuse or dark interstellar clouds. The record in meteorites is partly obscured by pervasive reheating that transformed much of the organic matter to kerogen; nonetheless, it seems that all six formation sites contributed. For comets, the large abundance of HCHO, HCN, and unsaturated hydrocarbons suggests an interstellar component of 50 percent or more, but the contributions of various interstellar processes, and of a solar-nebula component, are hard to quantify. A research program is outlined that may help reduce these uncertainties.

  3. Particulate organic matter distribution along the lower Amazon River: addressing aquatic ecology concepts using fatty acids.

    PubMed

    Mortillaro, Jean-Michel; Rigal, François; Rybarczyk, Hervé; Bernardes, Marcelo; Abril, Gwenaël; Meziane, Tarik

    2012-01-01

    One of the greatest challenges in understanding the Amazon basin functioning is to ascertain the role played by floodplains in the organic matter (OM) cycle, crucial for a large spectrum of ecological mechanisms. Fatty acids (FAs) were combined with environmental descriptors and analyzed through multivariate and spatial tools (asymmetric eigenvector maps, AEM and principal coordinates of neighbor matrices, PCNM). This challenge allowed investigating the distribution of suspended particulate organic matter (SPOM), in order to trace its seasonal origin and quality, along a 800 km section of the Amazon river-floodplain system. Statistical analysis confirmed that large amounts of saturated FAs (15:0, 18:0, 24:0, 25:0 and 26:0), an indication of refractory OM, were concomitantly recorded with high pCO(2) in rivers, during the high water season (HW). Contrastingly, FAs marker which may be attributed in this ecosystem to aquatic plants (18:2ω6 and 18:3ω3) and cyanobacteria (16:1ω7), were correlated with higher O(2), chlorophyll a and pheopigments in floodplains, due to a high primary production during low waters (LW). Decreasing concentrations of unsaturated FAs, that characterize labile OM, were recorded during HW, from upstream to downstream. Furthermore, using PCNM and AEM spatial methods, FAs compositions of SPOM displayed an upstream-downstream gradient during HW, which was attributed to OM retention and the extent of flooded forest in floodplains. Discrimination of OM quality between the Amazon River and floodplains corroborate higher autotrophic production in the latter and transfer of OM to rivers at LW season. Together, these gradients demonstrate the validity of FAs as predictors of spatial and temporal changes in OM quality. These spatial and temporal trends are explained by 1) downstream change in landscape morphology as predicted by the River Continuum Concept; 2) enhanced primary production during LW when the water level decreased and its residence time

  4. Particulate Organic Matter Distribution along the Lower Amazon River: Addressing Aquatic Ecology Concepts Using Fatty Acids

    PubMed Central

    Mortillaro, Jean-Michel; Rigal, François; Rybarczyk, Hervé; Bernardes, Marcelo; Abril, Gwenaël; Meziane, Tarik

    2012-01-01

    One of the greatest challenges in understanding the Amazon basin functioning is to ascertain the role played by floodplains in the organic matter (OM) cycle, crucial for a large spectrum of ecological mechanisms. Fatty acids (FAs) were combined with environmental descriptors and analyzed through multivariate and spatial tools (asymmetric eigenvector maps, AEM and principal coordinates of neighbor matrices, PCNM). This challenge allowed investigating the distribution of suspended particulate organic matter (SPOM), in order to trace its seasonal origin and quality, along a 800 km section of the Amazon river-floodplain system. Statistical analysis confirmed that large amounts of saturated FAs (15:0, 18:0, 24:0, 25:0 and 26:0), an indication of refractory OM, were concomitantly recorded with high pCO2 in rivers, during the high water season (HW). Contrastingly, FAs marker which may be attributed in this ecosystem to aquatic plants (18:2ω6 and 18:3ω3) and cyanobacteria (16:1ω7), were correlated with higher O2, chlorophyll a and pheopigments in floodplains, due to a high primary production during low waters (LW). Decreasing concentrations of unsaturated FAs, that characterize labile OM, were recorded during HW, from upstream to downstream. Furthermore, using PCNM and AEM spatial methods, FAs compositions of SPOM displayed an upstream-downstream gradient during HW, which was attributed to OM retention and the extent of flooded forest in floodplains. Discrimination of OM quality between the Amazon River and floodplains corroborate higher autotrophic production in the latter and transfer of OM to rivers at LW season. Together, these gradients demonstrate the validity of FAs as predictors of spatial and temporal changes in OM quality. These spatial and temporal trends are explained by 1) downstream change in landscape morphology as predicted by the River Continuum Concept; 2) enhanced primary production during LW when the water level decreased and its residence time

  5. Laboratory experimental simulations: Chemical evolution of the organic matter from interstellar and cometary ice analogs

    NASA Astrophysics Data System (ADS)

    Abou Mrad, N.; Vinogradoff, V.; Duverney, F.; Danger, G.; Theulé, P.; Borget, F.; Chiavassa, T.

    2015-01-01

    This contribution addresses the different approaches that are developed in our laboratory to study the chemical evolution of organic matter in stellar or interplanetary environments. In the first approach, starting from interstellar or cometary ice analogs subjected to different energy processes (thermal, photochemical), we aim to explain the mechanism of formation of key molecules (RING project: Reactivity in INterstellar ice Grains) such as HMT, POM or amino acid precursors that are or may be detected in future space missions. In a second approach, we are interested in the detection of volatile molecules sublimating from ice analogs when these latter are heated and/or irradiated (VAHIIA project: Volatile Analysis from the Heating of Interstellar Ice Analogs) through an online experimental device coupling the simulation chamber where ices are formed to a GC-MS instrument. The objective is thus to simulate the effects of the ice material warming when a young star forms or when a comet becomes active. This project provides an inventory of molecules that can be found in hot corinos or in the gaseous phase of comets. In a third approach, we analyze the organic matter contained in the refractory residues that can be considered as cometary analogs (RAHIIA Project: Residue Analysis from the Heating of Interstellar Ice Analogs) using very high resolution mass spectrometry (VHRMS). The results of these analyses show that residues present an important molecular diversity. This technique gives also the possibility to determine the elementary composition of these residues that can be compared to the meteorite composition. These residues can then be a basic material to develop, in a specific planetary environment, a prebiotic chemistry.

  6. -C Refractories

    NASA Astrophysics Data System (ADS)

    Xu, Yibiao; Sang, Shaobai; Li, Yawei; Ren, Bo; Zhao, Lei; Li, Yuanbing; Li, Shujing

    2014-06-01

    Al2O3-C refractories were first fabricated in a coke bed at 1673 K (1400 °C) using tabular corundum, reactive alumina, carbon black, silicon, and microsilica as the starting materials and phenol resin as the binder. Then the alkali attack resistance of those materials was conducted in the powder mixture of carbon black and potassium carbonate (1:1 wt pct) in a graphite crucible at 1273 K (1000 °C) for 10 hours. The correlation between pore size, permeability of Al2O3-C refractories, and their alkali (K2CO3) attack was investigated by means of mercury intrusion porosimetry, X-ray diffraction (XRD), and scanning electron microscopy (SEM). The results showed that the pore structure of Al2O3-C refractories was controlled by the addition of silicon, ultrafine reactive alumina, and microsilica to in-situ form SiC whiskers and mullite in the preparation process. The mean pore size of Al2O3-C refractories was strongly associated with permeability. With the decrease of the mean pore size, the permeability of the Al2O3-C refractories reduced constantly. The alkali attack test also verified that the Al2O3-C refractories with lower permeability had better alkali corrosion resistance, because the penetration of K vapor into the materials could be restricted effectively. The corrosion mechanism of Al2O3-C refractories supposes that (1) K2CO3 was reduced to K vapor and penetrated into the specimen through the open pores and (2) K vapor reacted with SiC, SiO2, and alumina to form KAlSi2O6 and KAlSiO4, which is in agreement with the thermodynamic prediction.

  7. Flood Pulse Influence on Export of Terrestrial Organic Matter

    NASA Astrophysics Data System (ADS)

    Dalzell, B. J.; Harbor, J. M.; Filley, T. R.

    2004-12-01

    While much attention has been placed on characterizing Terrestrial Organic Matter (TOM) export from large rivers, recent research has shown that in-stream processing of TOM in smaller streams and rivers over shorter time scales can be an important upland component of regional carbon budgets not detected at the outlets of large rivers. With predictions of climate change accompanied by more intense rainfall patterns in some areas, it is important to understand the linkage between flood events and watershed export of TOM. To this end, we have collected water samples from Big Pine Creek watershed, an 850km2 watershed located in west central Indiana. Organic carbon in dissolved, colloidal, and particulate size fractions has been described with molecular and stable carbon isotope techniques to track source, quantity, and compositional changes of TOM over changing flow conditions. Results from these samples show that flood conditions export dramatically more TOM; not only from increases in discharge, but also from increases in concentration of terrestrial organic carbon to all size fractions. While molecular biomarkers show increases in terrestrial organic matter, bulk stable carbon isotope values show that the sources of TOM do not remain constant. Rather, relative contributions from C4 plants (corn in this study area) increase during flood conditions by up to 40 percent. Finally, increases in rainfall intensity are likely to disproportionately increase organic carbon export from terrestrial systems, especially from smaller watersheds where short duration and high intensity flow events dominate annual discharge.

  8. Why dissolved organic matter (DOM) enhances photodegradation of methylmercury

    SciTech Connect

    Qian, Yun; Yin, Xiangping Lisa; Brooks, Scott C; Liang, Liyuan; Gu, Baohua

    2014-01-01

    Methylmercury (MeHg) is known to degrade photochemically, but it remains unclear what roles naturally dissolved organic matter (DOM) and complexing organic ligands play in MeHg photodegradation. Here we investigate the rates and mechanisms of MeHg photodegradation using DOM samples with varying oxidation states and origins as well as organic ligands with known molecular structures. All DOM and organic ligands increased MeHg photodegradation under solar irradiation, but the first-order rate constants varied depending on the oxidation state of DOM and the type and concentration of the ligands. Compounds containing both thiols and aromatics (e.g., thiosalicylate and reduced DOM) increased MeHg degradation rates far greater than those containing only aromatic or thiol functional groups (e.g., salicylate or glutathione). Our results suggest that, among other factors, the synergistic effects of thiolate and aromatic moieties in DOM greatly enhance MeHg photodegradation.

  9. SOIL NITROGEN TRANSFORMATIONS AND ROLE OF LIGHT FRACTION ORGANIC MATTER IN FOREST SOILS

    EPA Science Inventory

    Depletion of soil organic matter through cultivation may alter substrate availability for microbes, altering the dynamic balance between nitrogen (N) immobilization and mineralization. Soil light fraction (LF) organic matter is an active pool that decreases upon cultivation, and...

  10. Soil Quality of Restinga Forest: Organic Matter and Aluminum Saturation

    NASA Astrophysics Data System (ADS)

    Rodrigues Almeida Filho, Jasse; Casagrande, José Carlos; Martins Bonilha, Rodolfo; Soares, Marcio Roberto; Silva, Luiz Gabriel; Colato, Alexandre

    2013-04-01

    The restinga vegetation (sand coastal plain vegetation) consists of a mosaic of plant communities, which are defined by the characteristics of the substrates, resulting from the type and age of the depositional processes. This mosaic complex of vegetation types comprises restinga forest in advanced (high restinga) and medium regeneration stages (low restinga), each with particular differentiating vegetation characteristics. Of all ecosystems of the Atlantic Forest, restinga is the most fragile and susceptible to anthropic disturbances. The purpose of this study was evaluating the organic matter and aluminum saturation effects on soil quality index (SQI). Two locations were studied: State Park of the Serra do Mar, Picinguaba, in the city of Ubatuba (23°20' e 23°22' S / 44°48' e 44°52' W), and State Park of Cardoso Island in the city of Cananéia (25°03'05" e 25°18'18" S / 47°53'48" e 48° 05'42" W). The soil samples were collect at a depth of 0-10 cm, where concentrate 70% of vegetation root system. Was studied an additive model to evaluate soil quality index. The shallow root system development occurs due to low calcium levels, whose disability limits their development, but also can reflect on delay, restriction or even in the failure of the development vegetation. The organic matter is kept in the soil restinga ecosystem by high acidity, which reduces the decomposition of soil organic matter, which is very poor in nutrients. The base saturation, less than 10, was low due to low amounts of Na, K, Ca and Mg, indicating low nutritional reserve into the soil, due to very high rainfall and sandy texture, resulting in high saturation values for aluminum. Considering the critical threshold to 3% organic matter and for aluminum saturation to 40%, the IQS ranged from 0.95 to 0.1 as increased aluminum saturation and decreased the soil organic matter, indicating the main limitation to the growth of plants in this type of soil, when deforested.

  11. Terrestrially derived dissolved organic matter in the chesapeake bay and the middle atlantic bight

    NASA Astrophysics Data System (ADS)

    Mitra, Siddhartha; Bianchi, Thomas S.; Guo, Laodong; Santschi, Peter H.

    2000-10-01

    Concentrations of lignin-phenols were analyzed in high molecular weight dissolved organic matter (0.2 μm > HMW DOM > 1 kDa) isolated from surface waters of the Chesapeake Bay (C. Bay), and surface and bottom waters of the Middle Atlantic Bight (MAB). The abundance of lignin-phenols in HMW DOM was higher in the C. Bay (0.128 ± 0.06 μg L -1) compared to MAB surface waters (0.016 ± 0.004 μg L -1) and MAB bottom waters (0.005 ± 0.003 μg L -1). On an organic carbon-normalized basis, lignin-phenol abundances in the HMW DOM (i.e., Λ 6), were significantly higher ( p < 0.05) in bottom waters compared to sediments at some stations in the MAB. Ratios of syringyl to vanillyl phenols (S/V) in HMW DOM, indicative of angiosperm-derived lignin, ranged from 0.165 to 0.422 in C. Bay, 0.100 to 0.314 in MAB surface waters, and 0.076 to 0.357 in MAB bottom waters. Ratios of vanillic acid to vanillin (Ad/Al) V in HMW DOM, indicative of lignin decay, ranged from 0.611 to 1.37 in C. Bay, 0.534 to 2.62 in MAB surface waters, and 0.435 to 1.96 in MAB bottom water. Ratios of S/V and (Ad/Al) V showed no significant differences between each environment, providing no evidence of any compositionally distinct input of terrestrial organic matter into each environment. When considering depth profiles of suspended particulate matter in the MAB, with C:N ratios, and bulk radiocarbon ages and stable carbon isotopic values in HMW DOM isolated from these areas, two scenarios present themselves regarding the sources and transport of terrestrially derived HMW DOM in the MAB. Scenario #1 assumes that a low amount of refractory terrestrial organic matter and old DOC are uniformly distributed in the oceans, both in surface and bottom waters, and that primary production in surface waters increases DOC with low lignin and younger DOC which degrades easily. In this case, many of the trends in age and biomarker composition likely reflect general patterns of Atlantic Ocean surface and bottom water

  12. Soil organic matter regulates molybdenum storage and mobility in forests

    USGS Publications Warehouse

    Marks, Jade A; Perakis, Steven; King, Elizabeth K; Pett-Ridge, Julie

    2015-01-01

    The trace element molybdenum (Mo) is essential to a suite of nitrogen (N) cycling processes in ecosystems, but there is limited information on its distribution within soils and relationship to plant and bedrock pools. We examined soil, bedrock, and plant Mo variation across 24 forests spanning wide soil pH gradients on both basaltic and sedimentary lithologies in the Oregon Coast Range. We found that the oxidizable organic fraction of surface mineral soil accounted for an average of 33 %of bulk soil Mo across all sites, followed by 1.4 % associated with reducible Fe, Al, and Mn-oxides, and 1.4 % in exchangeable ion form. Exchangeable Mo was greatest at low pH, and its positive correlation with soil carbon (C) suggests organic matter as the source of readily exchangeable Mo. Molybdenum accumulation integrated over soil profiles to 1 m depth (τMoNb) increased with soil C, indicating that soil organic matter regulates long-term Mo retention and loss from soil. Foliar Mo concentrations displayed no relationship with bulk soil Mo, and were not correlated with organic horizon Mo or soil extractable Mo, suggesting active plant regulation of Mo uptake and/or poor fidelity of extractable pools to bioavailability. We estimate from precipitation sampling that atmospheric deposition supplies, on average, over 10 times more Mo annually than does litterfall to soil. In contrast, bedrock lithology had negligible effects on foliar and soil Mo concentrations and on Mo distribution among soil fractions. We conclude that atmospheric inputs may be a significant source of Mo to forest ecosystems, and that strong Mo retention by soil organic matter limits ecosystem Mo loss via dissolution and leaching pathways.

  13. Influence of vegetation changes on soil organic matter

    NASA Astrophysics Data System (ADS)

    Nørnberg, Per

    In a heath region at Hjelm Hede in Denmark oak trees are invading a Calluna/Empetrum vegetation. In less than a century the oak invasion has caused considerable changes in the soil: what was once an O-horizon under Calluna has changed to an A-horizon under oak; the Calluna E-horizon has lost its distinct appearance; and the sharp boundary between E and Bh has been obliterated. The directly visible changes are associated with a rise in pH of about one unit in the top horizon under the oaks, an increasing content of organic matter in the E-horizon, a decreasing content of organic matter in the Bh-horizon, and a fall in the C/N ratio. In order to estimate the total microbiological activity, cotton strips were placed in the upper soil horizons. The loss in tensile strength during two summer months was 10-15% under Calluna, but more than 50% under oaks. Initial attempts to find differences in the type and content of organic matter showed that the most abundant low-molecular organic acids extracted from the Of-horizons were 3,4-dihydroxybenzoic acid (protocatechuic acid), 4-hydroxybenzoic acid and 4-hydroxy-3-methoxybenzoic acid (vanillic acid). The extraction was done in 0.1 M sodium pyrophosphate at pH 10.2. The organic compounds were determined by HPLC. The 3,4-dihydroxybenzoic acid was relatively the most important compound under the Calluna heath, whereas 4-hydroxy-3-methoxybenzoic acid was most important under oaks. Extractions were performed on water samples from field lysimeter experiments to determine whether the substituted benzoic acids in the soil water arose under transport. These extractions exposed a ppm concentration of 2,4-dichlorobenzoic acid, a compound believed to originate from microbial decomposition of lysimeter material.

  14. Isotopic constraints on the origin of meteoritic organic matter

    NASA Technical Reports Server (NTRS)

    Kerridge, J. F.

    1991-01-01

    Salient features of the isotopic distribution of H, C and N in the organic material found in carbonaceous meteorites are noted. Most organic fractions are strongly enriched in D with respect to the D/H ratio characteristic of H2 in the protosolar system; substantial variations in C-13/C-12 ratio are found among different molecular species, with oxidised species tending to be C-13 enriched relative to reduced species; some homologous series reveal systematic decrease in C-13/C-12 with increasing C number; considerable variation in N-15/N-14 ratio is observed within organic matter, though no systematic pattern to its distribution has yet emerged; no interelement correlations have been observed between isotope enrichments for the different biogenic elements. The isotopic complexity echoes the molecular diversity observed in meteoritic organic matter and suggests that the organic matter was formed by multiple processes and/or from multiple sources. However, existence of a few systematic patterns points towards survival of isotopic signatures characteristic of one or more specific processes. The widespread D enrichment implies either survival of many species of interstellar molecule or synthesis from a reservoir containing a significant interstellar component. Several of the questions raised above can be addressed by more detailed determination of the distribution of the H, C and N isotopes among different well-characterized molecular fractions. Thus, the present study is aimed at discovering whether the different amino acids have comparable D enrichments, which would imply local synthesis from a D-enriched reservoir, or very viable D enrichments, which would imply survival of some interstellar amino acids. The same approach is also being applied to polycyclic aromatic hydrocarbons. Because the analytical technique employed (secondary ion mass spectrometry) can acquire data for all three isotopic systems from each molecular fraction, any presently obscured interelement

  15. The composition and degradability of upland dissolved organic matter

    NASA Astrophysics Data System (ADS)

    Moody, Catherine; Worrall, Fred; Clay, Gareth

    2016-04-01

    In order to assess controls on the degradability of DOM in stream water, samples of dissolved organic matter (DOM) and particulate organic matter (POM) were collected every month for a period of 24 months from an upland, peat-covered catchment in northern England. Each month the degradability of the DOM was assessed by exposing river water to light for up to 24 hours, and the change in the dissolved organic carbon (DOC) concentration in the water was measured. To provide context for the analysis of DOM and its degradability, samples of peat, vegetation, and litter were also taken from the same catchment and analysed. The organic matter samples were analysed by several methods including: elemental analysis (CHN and O), bomb calorimetry, thermogravimetric analysis, pyrolysis GC/MS, ICP-OES, stable isotope analysis (13C and 15N) and 13C solid state nuclear magnetic resonance (NMR). The water samples were analysed for pH, conductivity, absorbance at 400nm, anions, cations, particulate organic carbon (POC) and DOC concentrations. River flow conditions and meteorology were also recorded at the site and included in the analysis of the composition and degradability of DOM. The results of multiple regression models showed that the rates of DOC degradation were affected by the N-alkyl, O-alkyl, aldehyde and aromatic relative intensities, gross heat, OR and C:N. Of these, the N-alkyl relative intensity had the greatest influence, and this in turn was found to be dependent on the rainfall and soil temperature in the week before sampling.

  16. Using Riverine Natural Organic Matter to Test the Hypothesis that Soil Organic Matter is Modified by Contact with Sodium Hydroxide

    NASA Astrophysics Data System (ADS)

    Perdue, E. Michael; Driver, Shamus; Hertkorn, Norbert; Harir, Mourad; Schmitt-Kopplin, Philippe

    2016-04-01

    It has been postulated by some scientists that soil humic acids and fulvic acids are an artifact of alkaline extractions of soil. Riverine natural organic matter (NOM) is obtained in part by dissolution and transport of organic matter from soils by meteoric waters at acidic to circumneutral pH. The NOM may be fractionated into humic acid (HA), fulvic acid (FA), and hydrophilic NOM by adsorption of HA and FA onto XAD-8 resin at pH < 2, followed by their desorption with NaOH at pH 13. Alternatively, riverine NOM may be concentrated using reverse osmosis (RO) and desalted by cation exchange. Several properties of Suwannee River NOM prior to its isolation, after concentration by RO, and after the XAD-8 process are compared to detect modifications that might have resulted from exposure of the sample to low and high pH.

  17. Chemical Characterization of Dissolved Organic Matter in Hiroshima Bay, Japan

    NASA Astrophysics Data System (ADS)

    Fukushima, T.; Ishibashi, T.; Imai, A.

    2001-07-01

    The concentrations of dissolved organic carbon (DOC) and hydrophilic DOC (Hil-DOC) in Hiroshima Bay showed clear seasonal changes (high in summer and low in winter), suggesting the autochthonous production of Hil-DOC. The percentages of hydrophobic DOC (Hob-DOC) fractionated by XAD-8 resin were 33% for the bay waters and 41% for the river waters, whereas those of labile DOC (which decomposed during an incubation period of 100 days) were 20% and 24%, respectively. The increment of DOC to Chlorophyll a was calculated to be (0·014 mgl -1)/(μgl -1). The mixing experiments suggested a negligible deposition of DOC at the estuaries of inflowing rivers. The Hob-DOC went through the bay with negligible changes in concentration in both summer and winter, but its chemical characteristics, e.g. spectrophotometric properties and mean molecular weight, differed from those of riverine origin. In contrast, both labile and refractory components of Hil-DOC were produced mainly in the inner part of the bay during summer, and although a significant percentage of the labile component was subjected to biodegradation during transport to the outer part of the bay, its chemical characteristics did not change dramatically.

  18. Is organic matter found in glaciers similar to soil organic matter? A detailed molecular-level investigation of organic matter found in cryoconite holes on the Athabasca Glacier

    NASA Astrophysics Data System (ADS)

    Simpson, M. J.; Xu, Y.; Eyles, N.; Simpson, A. J.; Baer, A.

    2009-04-01

    Cryoconite is a dark-coloured, dust-like material found on the surfaces of glaciers. Cryoconite has received much interest recently because cryoconite holes, which are produced by accelerated ice melt, act as habitats for microbes on glacier surfaces and accelerate ice melt. To the best of our knowledge, cyroconite organic matter (COM) has not yet been chemically characterized at the molecular level. In this study, organic matter biomarkers and a host of Nuclear Magnetic Resonance (NMR) techniques were used to characterize COM from the Athabasca Glacier in the Canadian Rocky Mountains. The research questions that were targeted by this study include: 1) what are the sources of COM on the Athabasca Glacier; 2) are there any biomarker and/or NMR evidence for microbial community activity in the cryoconite holes; and 3) is the COM structurally similar to terrestrial OM? Solvent extracts contained large quantities of fatty acids, n-alkanols, n-alkanes, wax esters and sterols. A large contribution of C23, C25 and C27 relative to C29 and C31 n-alkanes suggests that allochthonous COM is mainly from lower order plants (mosses, lichens). This is confirmed by the absence of lignin phenols (after copper (II) oxidation) in extracts and NMR analyses of COM. Solution-state 1H NMR reveals prominent signals from microbial components, while solid-state 13C Cross Polarization Magic Angle Spinning NMR analysis shows an atypically high alkyl/O-alkyl ratio, suggesting that COM is unique compared to organic matter found in nearby soils. The NMR results suggest that COM is dominated by microbial-derived compounds which were confirmed by phospholipid fatty acid analysis, which showed a significant microbial contribution, primarily from bacteria and minor microeukaryotes. Both biomarker and NMR data suggest that COM likely supports active microbial communities on the Athabasca Glacier and that COM composition is uniquely different than that found in terrestrial environments. Our data

  19. An analysis of the chemical character of dissolved organic matter and soluble soil organic matter within the same catchment

    NASA Astrophysics Data System (ADS)

    Gabor, R. S.; Russell, N.; McKnight, D. M.

    2010-12-01

    Trends of increasing dissolved organic matter (DOM) concentrations have been reported in many parts of the world. To better understand how organic matter is transported throughout and used within watersheds, it is important to measure not only how much there is, but to also its chemical character. In this study, spectroscopic techniques were used to analyze the DOM from Boulder Creek in Colorado, as well as the soluble organic matter in soil from a smaller catchment within the watershed. Samples from the creek were taken at regular intervals for several years and the DOM quantity and quality was analyzed to determine both seasonal impacts and the affect of Barker Dam halfway up the watershed. Observed trends followed similar patterns to that seen in other alpine ecosystems, with a peak in microbial DOM just before snowmelt, followed by increasing terrestrial input. However, the storage in the reservoir made the signal less clear below the dam. Soil organic matter samples were taken with an aim to observing both spatial and temporal patterns. A large number of both surface and deep samples were taken in one time snapshot, and surface samples were taken from the same plots over several months beginning during snowmelt and reaching the end of the growing season. Surface samples displayed a stronger correlation with DOM in the stream than samples taken at depth, indicating much of the DOM comes from overland flow. However, strong microbial signals from samples at depth indicated the possibility that microbes may be using OM as an electron acceptor during bedrock weathering processes. Little variation was shown temporally in surface samples, although there was some seen in the riparian zone during snowmelt.

  20. Bulk organic matter and nitrogen removal from reclaimed water during groundwater recharge by enhanced direct injection well.

    PubMed

    Xuan, Zhao; Meng, Zhang; Xuzhou, Cheng

    2009-01-01

    Water shortages lead to increasing attention to artificial groundwater recharge by reclaimed water. A new kind of approach, enhanced direct injection-well recharge (EnDir) consisting of short- and long-term soil treatment, is considered to be suitable for large cities in China. In this paper, EnDir was simulated by soil columns in the laboratory with the secondary effluent as raw water that was ozonated before EnDir. Laboratory-scale experiments demonstrate that the short-term part of EnDir can remove 47 to 60% dissolved organic carbon (DOC), convert 5 mg/L of ammonia-nitrogen to equivalent nitrate-nitrogen, and offer preferred removal of non-UV-absorbing organics. Soluble microbial byproducts and fulvic-acid-like materials can be ozonated and then partially biodegraded. The residuals of organic matter as a refractory fraction are biodegraded continuously during the long-term part. The DOC value of 1.8 to 2.5 mg/L can be reached, and 40% of organic matter with molecular weight less than 500 Da can be removed after full-term EnDir. PMID:19280901

  1. Organic matter oxidation and aragonite diagenesis in a coral reef

    SciTech Connect

    Tribble, G.W. Univ. of Hawaii, Honolulu )

    1993-05-01

    A combination of field and theoretical work is used to study controls on the saturation state of aragonite inside a coral-reef framework. A closed-system ion-speciation model is used to evaluate the effect of organic-matter oxidation on the saturation state of aragonite. The aragonite saturation state initially drops below 1 but becomes oversaturated during sulfate reduction. The C:N ratio of the organic matter affects the degree of oversaturation with N-poor organic material resulting in a system more corrosive to aragonite. Precipitation of sulfide as FeS strongly affects the aragonite saturation state, and systems with much FeS formation will have a stronger tendency to become oversaturated with respect to aragonite. Both precipitation and dissolution of aragonite are predicted at different stages of the organic reaction pathway if the model system is maintained at aragonite saturation. Field data from a coral-reef framework indicate that the system maintains itself at aragonite saturation, and model-predicted changes in dissolved calcium follow those observed in the interstitial waters of the reef. Aragonite probably acts as a solid-phase buffer in regulating the pH of interstitial waters. Because interstitial water in the reef has a short residence time, the observed equilibration suggests rapid kinetics.

  2. Photochemical flocculation of terrestrial dissolved organic matter and iron

    NASA Astrophysics Data System (ADS)

    Helms, John R.; Mao, Jingdong; Schmidt-Rohr, Klaus; Abdulla, Hussain; Mopper, Kenneth

    2013-11-01

    Dissolved organic matter (DOM) rich water samples (Great Dismal Swamp, Virginia) were 0.1-μm filtered and UV-irradiated in a solar simulator for 30 days. During the irradiation, pH increased, particulate organic matter (POM) and particulate iron formed. After 30 days, 7% of the dissolved organic carbon (DOC) was converted to POC while 75% was remineralized. Approximately 87% of the iron was removed from the dissolved phase after 30 days, but iron did not flocculate until a major fraction of DOM was removed by photochemical degradation and flocculation (>10 days); thus, during the initial 10 days, there were sufficient organic ligands present or the pH was low enough to keep iron in solution. Nuclear magnetic resonance and Fourier transform infrared spectroscopies indicated that photochemically flocculated POM was more aliphatic than the residual non-flocculated DOM. Photochemically flocculated POM was also enriched in amide functionality, while carbohydrate-like material was resistant to both photochemical degradation and flocculation. Abiotic photochemical flocculation likely removes a significant fraction of terrestrial DOM from the upper water column between headwaters and the ocean, but has previously been ignored. Preliminary evidence suggests that this process may significantly impact the transport of DOM and POM in ocean margin environments including estuaries.

  3. Formation of soil organic matter via biochemical and physical pathways of litter mass loss

    NASA Astrophysics Data System (ADS)

    Cotrufo, M. Francesca; Soong, Jennifer L.; Horton, Andrew J.; Campbell, Eleanor E.; Haddix, Michelle L.; Wall, Diana H.; Parton, William J.

    2015-10-01

    Soil organic matter is the largest terrestrial carbon pool. The pool size depends on the balance between formation of soil organic matter from decomposition of plant litter and its mineralization to inorganic carbon. Knowledge of soil organic matter formation remains limited and current C numerical models assume that stable soil organic matter is formed primarily from recalcitrant plant litter. However, labile components of plant litter could also form mineral-stabilized soil organic matter. Here we followed the decomposition of isotopically labelled above-ground litter and its incorporation into soil organic matter over three years in a grassland in Kansas, USA, and used laboratory incubations to determine the decay rates and pool structure of litter-derived organic matter. Early in decomposition, soil organic matter formed when non-structural compounds were lost from litter. Soil organic matter also formed at the end of decomposition, when both non-structural and structural compounds were lost at similar rates. We conclude that two pathways yield soil organic matter efficiently. A dissolved organic matter-microbial path occurs early in decomposition when litter loses mostly non-structural compounds, which are incorporated into microbial biomass at high rates, resulting in efficient soil organic matter formation. An equally efficient physical-transfer path occurs when litter fragments move into soil.

  4. Competitive Sorption and Desorption of Chlorinated Organic Solvents (DNAPLs) in Engineered Natural Organic Matter

    SciTech Connect

    Tang, Jixin; Weber, Walter J., Jr.

    2004-03-31

    The effects of artificially accelerated geochemical condensation and maturation of natural organic matter on the sorption and desorption of trichloroethylene (TCE) and tetrachloroethylene (PCE) were studied. The sorption and desorption of TCE in the presence and absence of the competing PCE and 1,2-dichlorobenzene (DCB) were also examined. A sphagnum peat comprising geologically young organic matter was artificially ''aged'' using superheated water, thus increasing the aromaticity and the degree of condensation of its associated organic matter. The sorption of all solutes tested were increased remarkably and their respective desorptions reduced, by the aged peat. The sorption capacities and isotherm nonlinearities of the peat for both TCE and PCE were found to increase as treatment temperature increased. In the competitive sorption studies, both PCE and DCB were found to depress TCE sorption, with PCE having greater effects than DCB, presumably because the molecular structure o f the former is more similar to that of TCE.

  5. Remote monitoring of organic matter in the ocean

    NASA Astrophysics Data System (ADS)

    Niccolai, Filippo; Bazzani, Marco; Cecchi, Giovanna; Innamorati, Mario; Massi, Luca; Nuccio, Caterina; Santoleri, Rosalia

    1999-12-01

    The monitoring of organic matter, suspended or dissolved in the water column, is relevant for the study of the aquatic environment. Actually, the Dissolved Organic Matter (DOM) represents a major reservoir of reactive carbon in the global carbon cycle, thus influencing significantly the marine ecosystem. Due to the strong absorption in the near ultraviolet, DOM reduces considerably the extinction path of solar light in the water column, affecting phytoplankton population and its vertical distribution. The measurement of the DOM absorption coefficient has to be regarded as a good parameter for the monitoring of water quality. This paper deals with the measurements carried out during the oceanographic campaign 'Marine Fronts,' which took place in the Western Mediterranean Sea and Atlantic Ocean from July 14 to August 5, 1998. In this measurement campaign, a high spectral resolution fluorescence lidar (FLIDAR) was installed on the rear-deck of the O/V 'Urania,' acquiring remote fluorescence spectra both in ship motion and in stations. A particular attention was devoted to the monitoring of DOM distribution in the different water masses in marine frontal areas. The lidar data were compared and integrated with SST satellite data and biological samplings. The results show that FLIDAR data agree with satellite imagery, particularly for marine front detection. The comparison with water sample data gave indications for retrieving the DOM absorption coefficient directly from fluorescence remote spectra. In addition, a protein like fluorescence band was detected in the measurements carried out on total suspended matter filtered from the water samplings.

  6. Comprehensive assessment of precursors, diagenesis, and reactivity to water treatment of dissolved and colloidal organic matter

    USGS Publications Warehouse

    Leenheer, J.A.

    2004-01-01

    A comprehensive isolation, fractionation, and characterization research approach was developed for dissolved and colloidal organic matter (DOM) in water, and it was applied to various surface- and groundwaters to assess DOM precursors, DOM diagenesis, and DOM reactivity to water treatment processes. Major precursors for natural DOM are amino sugars, condensed tannins, and terpenoids. Amino sugar colloids derived from bacterial cell walls are incompletely removed by drinking water treatment and foul reverse osmosis membranes, but are nearly quantitatively removed by soil/aquifer treatment. When chlorinated, amino sugars produce low yields of regulated disinfection by-products (DBFs) but they produce significant chlorine demand that is likely caused by chlorination of free amino groups. Condensed tannins are major precursors for "blackwater" DOM such as that found in the Suwannee River. This DOM produces high yields of DBPs upon chorination, and is efficiently removed by coagulation/flocculation treatment. Terpenoid-derived DOM appears to be biologically refractory, infiltrates readily into groundwater with little removal by soil/aquifer treatment, gives low DBF-yields upon chlorination and is poorly removed by coagulation/flocculation treatments. Peptides derived from proteins are major components of the base DOM fraction (10% or less of the mass of DOM), and this fraction produces large yields of haloacetonitriles upon chorination.

  7. Photochemical production of singlet oxygen from particulate organic matter.

    PubMed

    Appiani, Elena; McNeill, Kristopher

    2015-03-17

    Dissolved organic matter is established as one of the most relevant photosensitizers in aquatic environments, producing singlet oxygen (1O2) alongside other photochemically produced reactive intermediates. While the production of 1O2 from DOM has been well studied, the relative importance of particulate organic matter (POM) to the overall 1O2 production is less well understood. POM is known to play an important role in pollutant fate through the sorption and transport of hydrophobic pollutants. If POM is directly involved in 1O2 production, sorbed molecules would be expected to undergo enhanced photodegradation. In this work, synthetic POM was prepared by coating silica particles with commercial humic acid. The photochemical behavior of these POM samples was compared to dissolved commercial humic acids (DOM). Suspended natural sediment was also studied to test the environmental relevance of the synthetic POM model. Synthetic POM particles appear to simulate well the 1O2-production of suspended sediment. The 1O2 concentrations experienced by POM-sorbed probe molecules was up to 30% higher than experienced by DOM-sorbed ones, even though the aqueous concentration of 1O2 in irradiated POM suspensions was much lower than the analogous DOM solutions. These results were interpreted with a reaction-diffusion model, which suggested that the production rate of 1O2 by POM is lower than DOM, but the loss of 1O2 from the POM-phase is also lower than DOM. Based on the experimental results of this study, calculations were conducted to estimate the impact of removing POM on 1O2-mediated processes. These calculations indicate that compounds with a log Koc value near 4 will be most affected by removal of POM and that the magnitude of the effect is proportional to the fraction of the total organic matter represented by POM. This study demonstrates that particles can play an important role in the degradation of organic compounds via aquatic photochemistry. PMID:25674663

  8. Organic speciation of size-segregated atmospheric particulate matter

    NASA Astrophysics Data System (ADS)

    Tremblay, Raphael

    Particle size and composition are key factors controlling the impacts of particulate matter (PM) on human health and the environment. A comprehensive method to characterize size-segregated PM organic content was developed, and evaluated during two field campaigns. Size-segregated particles were collected using a cascade impactor (Micro-Orifice Uniform Deposit Impactor) and a PM2.5 large volume sampler. A series of alkanes and polycyclic aromatic hydrocarbons (PAHs) were solvent extracted and quantified using a gas chromatograph coupled with a mass spectrometer (GC/MS). Large volume injections were performed using a programmable temperature vaporization (PTV) inlet to lower detection limits. The developed analysis method was evaluated during the 2001 and 2002 Intercomparison Exercise Program on Organic Contaminants in PM2.5 Air Particulate Matter led by the US National Institute of Standards and Technology (NIST). Ambient samples were collected in May 2002 as part of the Tampa Bay Regional Atmospheric Chemistry Experiment (BRACE) in Florida, USA and in July and August 2004 as part of the New England Air Quality Study - Intercontinental Transport and Chemical Transformation (NEAQS - ITCT) in New Hampshire, USA. Morphology of the collected particles was studied using scanning electron microscopy (SEM). Smaller particles (one micrometer or less) appeared to consist of solid cores surrounded by a liquid layer which is consistent with combustion particles and also possibly with particles formed and/or coated by secondary material like sulfate, nitrate and secondary organic aerosols. Source apportionment studies demonstrated the importance of stationary sources on the organic particulate matter observed at these two rural sites. Coal burning and biomass burning were found to be responsible for a large part of the observed PAHs during the field campaigns. Most of the measured PAHs were concentrated in particles smaller than one micrometer and linked to combustion sources

  9. Missing links in the root-soil organic matter continuum.

    SciTech Connect

    O'Brien, S. L.; Iversen, C. M.; Biosciences Division; ORNL

    2009-01-01

    The soil environment remains one of the most complex and poorly understood research frontiers in ecology. Soil organic matter (SOM), which spans a continuum from fresh detritus to highly processed, mineral-associated organic matter, is the foundation of sustainable terrestrial ecosystems. Heterogeneous SOM pools are fueled by inputs from living and dead plants, driven by the activity of micro- and mesofauna, and are shaped by a multitude of abiotic factors (Fig. 1). The specialization required to measure unseen processes that occur on a wide range of spatial and temporal scales has led to the partitioning of soil ecology research across several disciplines. In the organized oral session 'Missing links in the root-soil organic matter continuum' at the annual Ecological Society of America meeting in Albuquerque, NM, USA, we joined the call for greater communication and collaboration among ecologists who work at the root-soil interface (e.g. Coleman, 2008). Our goal was to bridge the gap between scientific disciplines and to synthesize disconnected pieces of knowledge from root-centric and soil-centric studies into an integrated understanding of belowground ecosystem processes. We focused this report around three compelling themes that arose from the session: (1) the influence of the rhizosphere on SOM cycling, (2) the role of soil heterotrophs in driving the transformation of root detritus to SOM, and (3) the controlling influence of the soil environment on SOM dynamics. We conclude with a discussion of new approaches for gathering data to bridge gaps in the root-SOM continuum and to inform the next generation of ecosystem models.

  10. Modelling of organic matter dynamics during the composting process.

    PubMed

    Zhang, Y; Lashermes, G; Houot, S; Doublet, J; Steyer, J P; Zhu, Y G; Barriuso, E; Garnier, P

    2012-01-01

    Composting urban organic wastes enables the recycling of their organic fraction in agriculture. The objective of this new composting model was to gain a clearer understanding of the dynamics of organic fractions during composting and to predict the final quality of composts. Organic matter was split into different compartments according to its degradability. The nature and size of these compartments were studied using a biochemical fractionation method. The evolution of each compartment and the microbial biomass were simulated, as was the total organic carbon loss corresponding to organic carbon mineralisation into CO(2). Twelve composting experiments from different feedstocks were used to calibrate and validate our model. We obtained a unique set of estimated parameters. Good agreement was achieved between the simulated and experimental results that described the evolution of different organic fractions, with the exception of some compost because of a poor simulation of the cellulosic and soluble pools. The degradation rate of the cellulosic fraction appeared to be highly variable and dependent on the origin of the feedstocks. The initial soluble fraction could contain some degradable and recalcitrant elements that are not easily accessible experimentally. PMID:21978424

  11. TRACE ORGANICS VARIATION ACROSS THE WASTEWATER TREATMENT SYSTEM OF A CLASS-B REFINERY AND ESTIMATE OF REMOVAL OF REFRACTORY ORGANICS BY ADD-ON MIXED-MEDIA FILTRATION AND GRANULAR ACTIVATED CARBON AT PILOT SCALE

    EPA Science Inventory

    This report presents the results of research to evaluate the efficiency of pilot-scale granular activated carbon for the removal of organic compounds refractory to the activated-sludge treatment system of a Class B petroleum refinery that met BPT ('best practicable technology') i...

  12. Coastal-offshore exchange of organic matter across the Cape Ghir filament (NW Africa) during moderate upwelling

    NASA Astrophysics Data System (ADS)

    Santana-Falcón, Yeray; Benavides, Mar; Sangrà, Pablo; Mason, Evan; Barton, Eric Desmond; Orbi, Abdellatif; Arístegui, Javier

    2016-02-01

    The net coastal-ocean export of particulate organic carbon (POC), dissolved organic carbon (DOC) and chlorophyll a is studied in August 2009 at the Cape Ghir filament, a recurrent feature located within the NW African upwelling system. The estimated flux of excess total organic carbon (the non-refractory pools of DOC and POC) is about 2.1 × 109 kg C y- 1. DOC represents ~ 70% of the excess organic carbon in August 2009, during moderate upwelling. Assuming that this flux is representative of the range within a typical year, the yearly offshore net transport of total organic carbon would represent at least 29% of the primary production in this area. Since the Cape Ghir filament may extend hundreds of kilometers offshore, the associated seaward flux of organic carbon would contribute to the high microbial respiration rates reported from the nearby oligotrophic open ocean region. Our results illustrate that, when considering the regional carbon budgets of eastern boundary regions, it is imperative to take account of the offshore transport of organic matter in the numerous and recurrent upwelling filaments.

  13. Soil dissolved organic matter export to coastal temperate rainforest streams

    NASA Astrophysics Data System (ADS)

    Edwards, R. T.; D'Amore, D. V.; Hood, E.; Johnson, A.

    2006-12-01

    The north coastal temperate rainforest is a dynamic area of biogeochemical exchange between terrestrial and aquatic ecosystems. Wetlands and poorly drained soils dominate the landscape, where wetlands alone comprise 30% of the watersheds. The region is experiencing warming with potentially profound impacts on soil processes, forest structure, stream productivity, and the large and valuable salmon fishery. There are few data on stream chemistry, biological productivity, or discharge among soils and streams in the region. To predict the impact of climate change, management practices or land use on streams we need better baseline data on soil-stream interactions in temperate rainforest watersheds. We measured weekly export of dissolved organic matter from 3 dominant soil vegetation communities (peat bogs, forested wetlands and mineral soil uplands) during spring through fall of 2006. Three replicate sites for each soil type were gauged with weirs and fluxes of major forms of carbon, nitrogen and phosphorus measured. Discharge dominated the seasonal flux dynamics but major differences in export and area-specific export emphasized differences in soil-specific transformations on nutrient export potential. Export per unit soil area varied from 0.01 to 25 kg C/ha/day. Peat bogs exported 2-5 times as much per unit area as the other two soils. Forested wetlands were intermediate between bogs and uplands in export per unit area. Mean daily carbon fluxes from gauged subcatchments ranged from 0.01 to 75 kg C/day. Because they are larger than bogs, forested wetlands exported the greatest amount of DOC at our study locations, with uplands exporting intermediate amounts during spring floods. Uplands and bogs exported far less than forested wetlands during normal flow conditions. Total nitrogen fluxes were dominated by organic forms and seasonal trends closely followed the patterns observed for DOC. Although wetlands of either type export more organic matter per unit area, the

  14. ENVIRONMENTAL RESEARCH BRIEF: CHARACTERIZATION OF ORGANIC MATTER IN SOIL AND AQUIFER SOLIDS

    EPA Science Inventory

    The focus of this work was the evaluation of analytical methods to determine and characterize fractions of subsurface organic matter. Major fractions of total organic carbon (TOC) include: particulate organic carbon (POC) in aquifer material, dissolved organic carbon (DOC) and ...

  15. Processing of atmospheric organic matter by California radiation fogs

    NASA Astrophysics Data System (ADS)

    Collett, Jeffrey L., Jr.; Herckes, Pierre; Youngster, Sarah; Lee, Taehyoung

    2008-03-01

    Considerable effort has been put into characterizing the ionic composition of fogs and clouds over the past twenty-five years. Recently it has become evident that clouds and fogs often contain large concentrations of organic material as well. Here we report findings from a series of studies examining the organic composition of radiation fogs in central California. Organic compounds in these fogs comprise a major fraction of total solute mass, with total organic carbon sometimes reaching levels of several tens of mg/L. This organic matter is comprised of a wide variety of compounds, ranging from low molecular weight organic acids to high molecular weight compounds with molecular masses approaching several hundred to a thousand g/mole. The most abundant individual compounds are typically formic acid, acetic acid, and formaldehyde. High concentrations are also observed of some dicarboxylic acids (e.g., oxalate) and dicarbonyls (e.g., glyoxal and methylglyoxal) and of levoglucosan, an anhydrosugar characteristically emitted by biomass combustion. Many other compounds have been identified in fog water by GC/MS, including long chain n-alkanoic acids, n-alkanes, PAH, and others, although these compounds typically comprise a total of only a few percent of fog TOC. Measurements of fog scavenging of organic and elemental carbon reveal preferential scavenging of organic carbon. Tracking of individual organic compounds utilized as source type markers suggests the fogs differentially scavenge carbonaceous particles from different source types, with more active processing of wood smoke than vehicle exhaust. Observations of high deposition velocities of fog-borne organic carbon, in excess of 1 cm/s, indicate that fogs in the region represent an important mechanism for cleansing the atmosphere of pollution.

  16. Soft X-Ray Photoionizing Organic Matter from Comet Wild 2: Evidence for the Production of Organic Matter by Impact Processes

    NASA Technical Reports Server (NTRS)

    Zolensky, Michael E.; Wirick, S.; Flynn, G. J.; Jacobsen, C.; Na

    2011-01-01

    The Stardust mission collected both mineral and organic matter from Comet Wild 2 [1,2,3,4]. The organic matter discovered in Comet Wild 2 ranges from aromatic hydrocarbons to simple aliphatic chains and is as diverse and complex as organic matter found in carbonaceous chondrites and interplanetary dust particles.[3,5,6,7,8,9]. Compared to insoluble organic matter from carbonaceous chondrites the organic matter in Comet Wild 2 more closely resembles organic matter found in the IDPS both hydrous and anhydrous. Common processes for the formation of organic matter in space include: Fischer-Tropsch, included with this aqueous large body and moderate heating alterations; UV irradiation of ices; and; plasma formation and collisions. The Fischer-Tropsch could only occur on large bodies processes, and the production of organic matter by UV radiation is limited by the penetration depth of UV photons, on the order of a few microns or less for most organic matter, so once organic matter coats the ices it is formed from, the organic production process would stop. Also, the organic matter formed by UV irradiation would, by the nature of the process, be in-sensitive to photodissocation from UV light. The energy of soft X-rays, 280-300 eV occur within the range of extreme ultraviolet photons. During the preliminary examination period we found a particle that nearly completely photoionized when exposed to photons in the energy range 280-310eV. This particle experienced a long exposure time to the soft x-ray beam which caused almost complete mass loss so little chemical information was obtain. During the analysis of our second allocation we have discovered another particle that photoionized at these energies but the exposure time was limited and more chemical information was obtained.

  17. Mercury dilution by autochthonous organic matter in a fertilized mangrove wetland.

    PubMed

    Machado, Wilson; Sanders, Christian J; Santos, Isaac R; Sanders, Luciana M; Silva-Filho, Emmanoel V; Luiz-Silva, Wanilson

    2016-06-01

    A dated sediment core from a highly-fertilized mangrove wetland located in Cubatão (SE Brazil) presented a negative correlation between mercury (Hg) and organic carbon contents. This is an unusual result for a metal with well-known affinity to organic matter. A dilution of Hg concentrations by autochthonous organic matter explained this observation, as revealed by carbon stable isotopes signatures (δ(13)C). Mercury dilution by the predominant mangrove-derived organic matter counterbalanced the positive influences of algal-derived organic matter and clay contents on Hg levels, suggesting that deleterious effects of Hg may be attenuated. Considering the current paradigm on the positive effect of organic matter on Hg concentrations in coastal sediments and the expected increase in mangrove organic matter burial due to natural and anthropogenic stimulations of primary production, predictions on the influences of organic matter on Hg accumulation in mangrove wetlands deserve caution. PMID:26874872

  18. Unraveling the chemical space of terrestrial and meteoritic organic matter

    NASA Astrophysics Data System (ADS)

    Schmitt-Kopplin, Philippe; Harir, Mourad; Hertkorn, Norbert; Kanawati, Basem; Ruf, Alexander; Quirico, Eric; Bonal, Lydie; Beck, Pierre; Gabelica, Zelimir

    2015-04-01

    In terrestrial environments natural organic matter (NOM) occurs in soils, freshwater and marine environments, in the atmosphere and represents an exceedingly complex mixture of organic compounds that collectively exhibits a nearly continuous range of properties (size-reactivity continuum). In these materials, the "classical" biogeosignatures of the (biogenic and geogenic) precursor molecules, like lipids, lignins, proteins and natural products have been attenuated, often beyond recognition, during a succession of biotic and abiotic (e.g. photo- and redox chemistry) reactions. Because of this loss of biochemical signature, these materials can be designated non-repetitive complex systems. The access to extra-terrestrial organic matter is given i.e. in the analysis of meteoritic materials. Numerous descriptions of organic molecules present in organic chondrites have improved our understanding of the early interstellar chemistry that operated at or just before the birth of our solar system. However, many molecular analyses are so far targeted toward selected classes of compounds with a particular emphasis on biologically active components in the context of prebiotic chemistry. Here we demonstrate that a non-targeted ultrahigh-resolution molecular analysis of the solvent-accessible organic fraction of meteorite extracted under mild conditions allows one to extend its indigenous chemical diversity to tens of thousands of different molecular compositions and likely millions of diverse structures. The description of the molecular complexity provides hints on heteroatoms chronological assembly, shock and thermal events and revealed recently new classes of thousands of novel organic, organometallic compounds uniquely found in extra-terrestrial materials and never described in terrestrial systems. This high polymolecularity suggests that the extraterrestrial chemodiversity is high compared to terrestrial relevant biological and biogeochemical-driven chemical space. (ultra

  19. Organic Matter as an Indicator of Soil Degradation

    NASA Astrophysics Data System (ADS)

    Romero Diaz, Asuncion; Damian Ruiz Sinoga, Jose

    2010-05-01

    Numerous and expensive physical-chemical tests are often carried out to determine the level of soil degration. This study was to find one property, as Organic Matter, which is usually analyzed for determine the soil degradation status. To do this 19 areas in the south and southeast of the Iberian Peninsula (provinces of Málaga, Granada, Almería y Murcia) were selected and a wide sampling process was carried out. Sampling points were spread over a wide pluviometric gradient (from 1100 mm/yr to 232 mm/yr) covering the range from Mediterranean wet to dry. 554 soil surface samples were taken from soil (0-10 cm) and the following properties were analyzed: Texture, Organic Matter (OM), Electric Conductivity (EC), Aggregate Stability (AE) y Cation Exchange Capacity (CEC). These properties were intercorrelated and also with rainfall and the K factor of soil erosion, calculated for each sampling point. Los results obtained by applying the Pearson correlation coefficient to the database shows how as rainfall increases so does OM content (0,97) and la CEC (0,89), but K factor (-0,80) reacts inversely. The content of OM in the soil is related to its biological activity and this in turn is the result of available wáter within the system and, consequently, rainfall. This is specially important in fragile and complex ecogeomorphological systems as is the case of the Mediterranean, where greater or lesser rainfall is similarly reflected in the levels of increase or decrease of soil organic matter. This affirmation is reinforced by linking the organic matter of the soil with other indicative properties such as CEC and erosion, as has been shown by various authors (Imeson y Vis, 1984; De Ploey & Poesen, 1985; Le Bissonnais, 1996; Boix-Fayos et al., 2001; Cammeraat y Imeson, 1998; Cerdá, 1998). As has been stated, there is a direct relationship between rainfall, organic matter content, cation exchange capacity, structural stability, and the resistence to soil erosion factor

  20. Lead sequestration and species redistribution during soil organic matter decomposition

    USGS Publications Warehouse

    Schroth, A.W.; Bostick, B.C.; Kaste, J.M.; Friedland, A.J.

    2008-01-01

    The turnover of soil organic matter (SOM) maintains a dynamic chemical environment in the forest floor that can impact metal speciation on relatively short timescales. Here we measure the speciation of Pb in controlled and natural organic (O) soil horizons to quantify changes in metal partitioning during SOM decomposition in different forest litters. We provide a link between the sequestration of pollutant Pb in O-horizons, estimated by forest floor Pb inventories, and speciation using synchrotron-based X-ray fluorescence and X-ray absorption spectroscopy. When Pb was introduced to fresh forest Oi samples, it adsorbed primarily to SOM surfaces, but as decomposition progressed over two years in controlled experiments, up to 60% of the Pb was redistributed to pedogenic birnessite and ferrihydrite surfaces. In addition, a significant fraction of pollutant Pb in natural soil profiles was associated with similar mineral phases (???20-35%) and SOM (???65-80%). Conifer forests have at least 2-fold higher Pb burdens in the forest floor relative to deciduous forests due to more efficient atmospheric scavenging and slower organic matter turnover. We demonstrate that pedogenic minerals play an important role in surface soil Pb sequestration, particularly in deciduous forests, and should be considered in any assessment of pollutant Pb mobility. ?? 2008 American Chemical Society.

  1. Lead Sequestration and Species Redistribution During Soil Organic Matter Decomposition

    SciTech Connect

    Schroth,A.; Bostick, B.; Kaste, J.; Friedland, A.

    2008-01-01

    The turnover of soil organic matter (SOM) maintains a dynamic chemical environment in the forest floor that can impact metal speciation on relatively short timescales. Here we measure the speciation of Pb in controlled and natural organic (O) soil horizons to quantify changes in metal partitioning during SOM decomposition in different forest litters. We provide a link between the sequestration of pollutant Pb in O-horizons, estimated by forest floor Pb inventories, and speciation using synchrotron-based X-ray fluorescence and X-ray absorption spectroscopy. When Pb was introduced to fresh forest Oi samples, it adsorbed primarily to SOM surfaces, but as decomposition progressed over two years in controlled experiments, up to 60% of the Pb was redistributed to pedogenic birnessite and ferrihydrite surfaces. In addition, a significant fraction of pollutant Pb in natural soil profiles was associated with similar mineral phases ({approx}20-35%) and SOM ({approx}65-80%). Conifer forests have at least 2-fold higher Pb burdens in the forest floor relative to deciduous forests due to more efficient atmospheric scavenging and slower organic matter turnover. We demonstrate that pedogenic minerals play an important role in surface soil Pb sequestration, particularly in deciduous forests, and should be considered in any assessment of pollutant Pb mobility.

  2. Lead Sequestration And Species Redistribution During Soil Organic Matter Decomposition

    SciTech Connect

    Schroth, A.W.; Bostick, B.C.; Kaste, J.M.; Friedland, A.J.

    2009-05-27

    The turnover of soil organic matter (SOM) maintains a dynamic chemical environment in the forest floor that can impact metal speciation on relatively short timescales. Here we measure the speciation of Pb in controlled and natural organic (O) soil horizons to quantify changes in metal partitioning during SOM decomposition in different forest litters. We provide a link between the sequestration of pollutant Pb in O-horizons, estimated by forest floor Pb inventories, and speciation using synchrotron-based X-rayfluorescence and X-ray absorption spectroscopy. When Pb was introduced to fresh forest O{sub i} samples, it adsorbed primarily to SOM surfaces, but as decomposition progressed over two years in controlled experiments, up to 60% of the Pb was redistributed to pedogenic birnessite and ferrihydrite surfaces. In addition, a significant fraction of pollutant Pb in natural soil profiles was associated with similar mineral phases ({approx}20--35%) and SOM ({approx}65--80%). Conifer forests have at least 2-fold higher Pb burdens in the forest floor relative to deciduous forests due to more efficient atmospheric scavenging and slower organic matter turnover. We demonstrate that pedogenic minerals play an important role in surface soil Pb sequestration, particularly in deciduous forests, and should be considered in any assessment of pollutant Pb mobility.

  3. Complexation of lead by organic matter in Luanda Bay, Angola.

    PubMed

    Leitão, Anabela; Santos, Ana Maria; Boaventura, Rui A R

    2015-10-01

    Speciation is defined as the distribution of an element among different chemical species. Although the relation between speciation and bioavailability is complex, the metal present as free hydrated ion, or as weak complexes able to dissociate, is usually more bioavailable than the metal incorporated in strong complexes or adsorbed on colloidal or particulate matter. Among the analytical techniques currently available, anodic stripping voltammetry (ASV) has been one of the most used in the identification and quantification of several heavy metal species in aquatic systems. This work concerns the speciation study of lead, in original (natural, non-filtered) and filtered water samples and in suspensions of particulate matter and sediments from Luanda Bay (Angola). Complexes of lead with organics were identified and quantified by differential pulse anodic stripping voltammetry technique. Each sample was progressively titrated with a Pb(II) standard solution until complete saturation of the organic ligands. After each addition of Pb(II), the intensity, potential and peak width of the voltammetric signal were measured. The results obtained in this work show that more than 95 % of the lead in the aquatic environment is bound in inert organic complexes, considering all samples from different sampling sites. In sediment samples, the lead is totally (100 %) complexed with ligands adsorbed on the particles surface. Two kinds of dominant lead complexes, very strong (logK >11) and strong to moderately strong (8< logK <11), were found, revealing the lead affinity for the stronger ligands. PMID:27624745

  4. Effects of Dissolved Organic Matter Source on Wetland Bacterial Metabolism

    NASA Astrophysics Data System (ADS)

    Ward, A. K.

    2005-05-01

    Wetlands are rich environments for organic matter production from a variety of wetland plant types. Investigations of the Talladega Wetland Ecosystem (TWE) in the southeastern U.S. show that bacterioplankton productivity is driven by dissolved organic carbon derived from wetland plants. The TWE is formed from a small coastal plain stream that has been dammed by beaver activity and resides in a forested catchment. In this study, bacterioplankton communities sampled from the wetland were amended with leachate from two different plants common in the TWE, the soft rush, Juncus effusus, and hazel alder, Alnus serrulata, and compared to unamended controls. The bacterioplankton response was examined by measuring bacterial carbon productivity and by an array of fluorescent microscope techniques used to distinguish metabolically active and non-active cells. Both plant leachates elicited rapid and significant increases in productivity and numbers of metabolically active bacterial cells. However, the timeframe of response, the magnitude of response, and the bacterial morphotypes varied depending on the leachate source. This study suggests that wetland bacterial communities contain different sub-component populations that may generally occur in low numbers, but that can adapt and respond rapidly to different sources of organic matter native to the wetland.

  5. Missing links in the root-soil organic matter continuum

    SciTech Connect

    O'Brien, Sarah L.; Iversen, Colleen M

    2009-01-01

    The soil environment remains one of the most complex and poorly understood research frontiers in ecology. Soil organic matter (SOM), which spans a continuum from fresh detritus to highly processed, mineral-associated organic matter, is the foundation of sustainable terrestrial ecosystems. Heterogeneous SOM pools are fueled by inputs from living and dead plants, driven by the activity of micro- and mesofauna, and are shaped by a multitude of abiotic factors. The specialization required to measure unseen processes that occur on a wide range of spatial and temporal scales has led to the partitioning of soil ecology research across several disciplines. In the organized oral session 'Missing links in the root-soil organic matter continuum' at the annual Ecological Society of America meeting in Albuquerque, NM, USA, we joined the call for greater communication and collaboration among ecologists who work at the root-soil interface (e.g. Coleman, 2008). Our goal was to bridge the gap between scientific disciplines and to synthesize disconnected pieces of knowledge from root-centric and soil-centric studies into an integrated understanding of belowground ecosystem processes. We focused this report around three compelling themes that arose from the session: (1) the influence of the rhizosphere on SOM cycling, (2) the role of soil heterotrophs in driving the transformation of root detritus to SOM, and (3) the controlling influence of the soil environment on SOM dynamics. We conclude with a discussion of new approaches for gathering data to bridge gaps in the root-SOM continuum and to inform the next generation of ecosystem models. Although leaf litter has often been considered to be the main source of organic inputs to soil, Ann Russell synthesized a convincing body of work demonstrating that roots, rather than surface residues, control the accumulation of SOM in a variety of ecosystems. Living roots, which are chemically diverse and highly dynamic, also influence a wide

  6. Priming of soil organic matter decomposition in cryoturbated Arctic soils

    NASA Astrophysics Data System (ADS)

    Richter, A.; Wild, B.; Schnecker, J.; Rusalimova, O.

    2012-12-01

    The Arctic is subjected to particularly high rates of warming, with profound consequences for the carbon cycle: on the one hand plant productivity and C storage in plant biomass have been shown to increase strongly in many parts of the Arctic, on the other hand, increasing rates of soil organic matter (SOM) decomposition have been reported. One of the possibilities that could reconcile these observations is, that increased plant growth may lead to increased root exudation rates, which are known to stimulate microbial turnover of organic matter under certain circumstances, in a process termed "priming" of SOM. Two mechanisms have been brought forward that may be responsible for priming: first, easily assimilable material exuded by plant roots may help microbes to overcome their energy limitation and second, this input of labile carbon could lead to a nitrogen limitation of the microbial community and lead to nitrogen mining, i.e. decomposition of N-rich SOM. We here report on an incubation study with arctic soil investigating potential priming of SOM decomposition in organic topsoil horizons, cryoturbated organic matter and subsoil mineral horizons of tundra soil from the Taymyr peninsula in Siberia. We used arctic soils, that are characterized by cryoturbation (mixing of soil layers due to freezing and thawing), for this study. Turbated cryosols store more than 580 Gt C globally, a significant proportion of which is stored in the cryoturbated organic matter. We hypothesized that an increased availability of labile compounds would increase SOM decomposition rates, and that this effect would be strongest in horizons with a low natural availability of labile C, i.e. in the mineral subsoil. We amended soils with 13C labelled glucose, cellulose, amino acids or proteins, and measured the mineralization of SOM C as well as microbial community composition and potential activities of extracellular enzymes. Our results demonstrate that topsoil organic, cryoturbated and

  7. Molecular formulae of marine and terrigenous dissolved organic matter detected by electrospray ionization Fourier transform ion cyclotron resonance mass spectrometry

    NASA Astrophysics Data System (ADS)

    Koch, Boris P.; Witt, Matthias; Engbrodt, Ralph; Dittmar, Thorsten; Kattner, Gerhard

    2005-07-01

    The chemical structure of refractory marine dissolved organic matter (DOM) is still largely unknown. Electrospray ionization Fourier transform ion cyclotron resonance mass spectrometry (ESI FT-ICR-MS) was used to resolve the complex mixtures of DOM and provide valuable information on elemental compositions on a molecular scale. We characterized and compared DOM from two sharply contrasting aquatic environments, algal-derived DOM from the Weddell Sea (Antarctica) and terrigenous DOM from pore water of a tropical mangrove area in northern Brazil. Several thousand molecular formulas in the mass range of 300-600 Da were identified and reproduced in element ratio plots. On the basis of molecular elemental composition and double-bond equivalents (DBE) we calculated an average composition for marine DOM. O/C ratios in the marine samples were lower (0.36 ± 0.01) than in the mangrove pore-water sample (0.42). A small proportion of chemical formulas with higher molecular mass in the marine samples were characterized by very low O/C and H/C ratios probably reflecting amphiphilic properties. The average number of unsaturations in the marine samples was surprisingly high (DBE = 9.9; mangrove pore water: DBE = 9.4) most likely due to a significant contribution of carbonyl carbon. There was no significant difference in elemental composition between surface and deep-water DOM in the Weddell Sea. Although there were some molecules with unique marine elemental composition, there was a conspicuous degree of similarity between the terrigenous and algal-derived end members. Approximately one third of the molecular formulas were present in all marine as well as in the mangrove samples. We infer that different forms of microbial degradation ultimately lead to similar structural features that are intrinsically refractory, independent of the source of the organic matter and the environmental conditions where degradation took place.

  8. Advanced treatment of refractory organic pollutants in petrochemical industrial wastewater by bioactive enhanced ponds and wetland system.

    PubMed

    Liu, Shuo; Ma, Qiusha; Wang, Baozhen; Wang, Jifu; Zhang, Ying

    2014-05-01

    A large-scale combined ponds-wetland system was applied for advanced treatment of refractory pollutants in petrochemical industrial wastewater. The system was designed to enhance bioactivity and biological diversity, which consisted of anaerobic ponds (APs), facultative ponds (FPs), aerobic pond and wetland. The refractory pollutants in the petrochemical wastewater to be treated were identified as alkanes, chloroalkanes, aromatic hydrocarbons, and olefins, which were significantly degraded and transformed along with the influent flowing through the enhanced bioactive ponds-wetland system. 8 years of recent operational data revealed that the average removal rate of stable chemical oxygen demand (COD) was 42.7 % and that influent COD varied from 92.3 to 195.6 mg/L. Final effluent COD could reach 65.8 mg/L (average). COD removal rates were high in the APs and FPs and accounted for 75 % of the total amount removed. This result indicated that the APs and FPs degraded refractory pollutants through the facilitation of bacteria growth. The changes in the community structures of major microbes were assessed by 16SrDNA-denaturing gradient gel electrophoresis. The same analysis was used to identify the main bacterial function for the removal of refractory pollutants in the APs and FPs. The APs and FPs displayed similar microbial diversities, and some of the identified bacteria degraded and removed refractory pollutants. The overall results proved the applicability, stability, and high efficiency of the ponds-wetland system with enhanced bioactivity in the advanced removal of refractory pollutants from petrochemical industrial wastewater. PMID:24578265

  9. Persistence of soil organic matter as an ecosystem property

    SciTech Connect

    Schmidt, M.W.; Torn, M. S.; Abiven, S.; Dittmar, T.; Guggenberger, G.; Janssens, I.A.; Kleber, M.; Kögel-Knabner, I.; Lehmann, J.; Manning, D.A.C.; Nannipieri, P.; Rasse, D.P.; Weiner, S.; Trumbore, S.E.

    2011-08-15

    Globally, soil organic matter (SOM) contains more than three times as much carbon as either the atmosphere or terrestrial vegetation. Yet it remains largely unknown why some SOM persists for millennia whereas other SOM decomposes readily—and this limits our ability to predict how soils will respond to climate change. Recent analytical and experimental advances have demonstrated that molecular structure alone does not control SOM stability: in fact, environmental and biological controls predominate. Here we propose ways to include this understanding in a new generation of experiments and soil carbon models, thereby improving predictions of the SOM response to global warming.

  10. Aquatic Organic Matter Fluorescence - from phenomenon to application

    NASA Astrophysics Data System (ADS)

    Reynolds, Darren

    2014-05-01

    The use of fluorescence to quantify and characterise aquatic organic matter in river, ocean, ground water and drinking and waste waters has come along way since its discovery as a phenomenon in the early 20th century. For example, there are over 100 papers published each year in international peer reviewed journals, an order of magnitude increase since a decade ago (see Figure taken from ISI database from 1989 to 2007 for publications in the fields of river water and waste water). Since then it has been extensively used as a research tool since the 1990's by scientists and is currently used for a wide variety of applications within a number of sectors. Universities, organisations and companies that research into aquatic organic matter have either recently readily use appropriate fluorescence based techniques and instrumentation. In industry and government, the technology is being taken up by environmental regulators and water and wastewater companies. This keynote presentation will give an overview of aquatic organic matter fluorescence from its conception as a phenomenon through to its current use in a variety of emerging applications within the sectors concerned with understanding, managing and monitoring the aquatic environment. About the Speaker Darren Reynolds pioneered the use of fluorescence spectroscopy for the analysis of wastewaters in the 1990's. He currently leads a research group within the Centre for Research in Biosciences and sits on the Scientific Advisory Board for the Institute of Bio-Sensing Technology at the University of the West of England, Bristol. He is a multidisciplinary scientist concerned with the development of technology platforms for applications in the fields of environment/agri-food and health. His current research interests include the development of optical technologies and techniques for environmental and biological sensing and bio-prospecting applications. He is currently involved in the development and use of synthetic biology