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Sample records for suspension array analysis

  1. Suspension array technology: new tools for gene and protein analysis.

    PubMed

    Nolan, J P; Mandy, F F

    2001-11-01

    Flow cytometry has long been a key tool in the analysis of lymphocytes and other cells, owing to its ability to make quantitative, homogeneous, multiparameter measurements of particles. New developments in illumination sources, digital signal processing and microsphere chemistry are driving the development of flow cytometry in new areas of biomedical research. In particular. the maturation of approaches to perform highly parallel analyses using suspension arrays of microspheres with different morphospectral features is making flow cytometry an important tool in protein and genetic analysis. In this paper, we review the development of suspension array technology (SAT), current applications in protein and genomic analysis, and the prospects for this platform in a variety of large scale screening applications. PMID:11838973

  2. Multiplexed Microsphere Suspension Array-Based Immunoassays.

    PubMed

    Lin, Andrew; Salvador, Alexandra; Carter, J Mark

    2015-01-01

    ELISA is an extremely powerful tool to detect analytes because of its sensitivity, selectivity, reproducibility and ease of use. Here we describe sandwich immunoassays performed in suspension on spectrally unique microspheres developed by Luminex. Luminex assays offer the benefit of multiplex analysis of large numbers of analytes in a single reaction. Because the microspheres are spectrally unique, many microspheres, each attached to various antibodies, can be added to a single sample. Luminex instruments can distinguish each microsphere and detect the intensity of a reporter signal for each microsphere. Results are reported in Median Fluorescent Intensities for each analyte. Luminex assays can be used to detect up to 500 analytes in a high-throughput format. Luminex refers to this technology as xMAP(®). Here we describe a routine protocol for a Luminex immunoassay. Other Luminex assays would have to be optimized for specific conditions according to their use. PMID:26160569

  3. Multiplex suspension array for human anti-carbohydrate antibody profiling.

    PubMed

    Pochechueva, Tatiana; Chinarev, Alexander; Spengler, Marianne; Korchagina, Elena; Heinzelmann-Schwarz, Viola; Bovin, Nicolai; Rieben, Robert

    2011-02-01

    Glycan-binding antibodies form a significant subpopulation of both natural and acquired antibodies and play an important role in various immune processes. They are for example involved in innate immune responses, cancer, autoimmune diseases, and neurological disorders. In the present study, a microsphere-based flow-cytometric immunoassay (suspension array) was applied for multiplexed detection of glycan-binding antibodies in human serum. Several approaches for immobilization of glycoconjugates onto commercially available fluorescent microspheres were compared, and as the result, the design based on coupling of end-biotinylated glycopolymers has been selected. This method requires only minute amounts of glycans, similar to a printed glycan microarray. The resulting glyco-microspheres were used for detection of IgM and IgG antibodies directed against ABO blood group antigens. The possibility of multiplexing this assay was demonstrated with mixtures of microspheres modified with six different ABO related glycans. Multiplexed detection of anti-glycan IgM and IgG correlated well with singleplex assays (Pearson's correlation coefficient r = 0.95-0.99 for sera of different blood groups). The suspension array in singleplex format for A/B trisaccharide, H(di) and Le(x) microspheres corresponded well to the standard ELISA (r > 0.94). Therefore, the described method is promising for rapid, sensitive, and reproducible detection of anti-glycan antibodies in a multiplexed format. PMID:21107457

  4. Suspension Array Analysis of 16S rRNA from Fe- and SO42-Reducing Bacteria in Uranium-Contaminated Sediments Undergoing Bioremediation

    PubMed Central

    Chandler, Darrell P.; Jarrell, Ann E.; Roden, Eric R.; Golova, Julia; Chernov, Boris; Schipma, Matthew J.; Peacock, Aaron D.; Long, Philip E.

    2006-01-01

    A 16S rRNA-targeted tunable bead array was developed and used in a retrospective analysis of metal- and sulfate-reducing bacteria in contaminated subsurface sediments undergoing in situ U(VI) bioremediation. Total RNA was extracted from subsurface sediments and interrogated directly, without a PCR step. Bead array validation studies with total RNA derived from 24 isolates indicated that the behavior and response of the 16S rRNA-targeted oligonucleotide probes could not be predicted based on the primary nucleic acid sequence. Likewise, signal intensity (absolute or normalized) could not be used to assess the abundance of one organism (or rRNA) relative to the abundance of another organism (or rRNA). Nevertheless, the microbial community structure and dynamics through time and space and as measured by the rRNA-targeted bead array were consistent with previous data acquired at the site, where indigenous sulfate- and iron-reducing bacteria and near neighbors of Desulfotomaculum were the organisms that were most responsive to a change in injected acetate concentrations. Bead array data were best interpreted by analyzing the relative changes in the probe responses for spatially and temporally related samples and by considering only the response of one probe to itself in relation to a background (reference) environmental sample. By limiting the interpretation of the data in this manner and placing it in the context of supporting geochemical and microbiological analyses, we concluded that ecologically relevant and meaningful information can be derived from direct microarray analysis of rRNA in uncharacterized environmental samples, even with the current analytical uncertainty surrounding the behavior of individual probes on tunable bead arrays. PMID:16820459

  5. Simultaneous and rapid detection of multiple pesticide and veterinary drug residues by suspension array technology.

    PubMed

    Liu, Nan; Gao, Zhixian; Ma, Hongwei; Su, Pu; Ma, Xinhua; Li, Xiaoli; Ou, Guorong

    2013-03-15

    Suspension array technology is proposed for the simultaneous quantitative determination of seven kinds of pesticide and veterinary drug residues, namely, atrazine, chloramphenicol, carbaryl, clenbuterol, 17-β-estradiol, imidacloprid, and tylosin. The assay is simple and can be accomplished within 2h without repeated pumping and washing steps unlike conventional suspension arrays. The hapten-protein conjugate-coated beads bind to their complementary biotinylated antibodies using a competitive immunoassay format. The coefficients of determination R(2) for six targets were greater than 0.992, whereas that for atrazine was 0.961, which indicate good logistic correlations. The dynamic ranges for the seven targets in the 7-plex assay ranged from 2 log units to 4 log units(1.60×10(0)-1.64×10(3), 5.12×10(-2)-1.60×10(2), 1.00×10(0)-3.13×10(3), 4.00×10(-1)-4.10×10(2), 4.00×10(-1)-4.10×10(2), 5.12×10(-2)-1.60×10(2), and 2.00×10(0)-4.00×10(2)ngmL(-1)). The minimum detection concentrations of chloramphenicol, carbaryl, clenbuterol and 17-β-estradiol in the suspension array (0.05, 1.00, 0.40 and 0.40 ng mL(-1)) were lower than the corresponding limits of detection (0.25, 6.60, 24.23 and 13.96 ng mL(-1)) of using an indirect competitive enzyme-linked immunosorbent assay. Environmental scanning electron microscope was employed to characterize the bead surface, which directly confirmed the reactions on the beads. The suspension array is more flexible and feasible than ELISA for the fast quantitative analysis of pesticide and veterinary drug residues. PMID:23084755

  6. Simultaneous Detection of Fenitrothion and Chlorpyrifos-Methyl with a Photonic Suspension Array

    PubMed Central

    Wang, Xuan; Mu, Zhongde; Shangguan, Fengqi; Liu, Ran; Pu, Yuepu; Yin, Lihong

    2013-01-01

    A technique was developed for simultaneous detection of fenitrothion (FNT) and chlorpyrifos-methyl (CLT) using a photonic suspension array based on silica colloidal crystal beads (SCCBs). The SCCBs were encoded with the characteristic reflection peak originating from the stop-band of colloidal crystal. This approach avoids the bleaching, fading or potential interference seen when encoding by fluorescence. SCCBs with a nanopatterned surface had increased biomolecule binding capacity and improved stability. Under optimal conditions, the proposed suspension array allowed simultaneous detection of the selected pesticides in the ranges of 0.25 to 1024 ng/mL and 0.40 to 735.37 ng/mL, with the limits of detection (LODs) of 0.25 and 0.40 ng/mL, respectively. The suspension array was specific and had no significant cross-reactivity with other chemicals. The mean recoveries in tests in which samples were spiked with target standards were 82.35% to 109.90% with a standard deviation within 9.93% for CLT and 81.64% to 108.10% with a standard deviation within 8.82% for FNT. The proposed method shows a potentially powerful capability for fast quantitative analysis of pesticide residues. PMID:23805266

  7. Simultaneous detection of five antibiotics in milk by high-throughput suspension array technology.

    PubMed

    Su, Pu; Liu, Nan; Zhu, Maoxiang; Ning, Baoan; Liu, Ming; Yang, Zhihua; Pan, Xiujie; Gao, Zhixian

    2011-08-15

    A new suspension array technology is proposed for the simultaneous quantitative determination of five antibiotics-tylosin, tetracycline, gentamicin, streptomycin, and chloramphenicol in milk. A novel treatment of milk samples for suspension array with diethyl ether was performed which greatly reduced the interference of the disturbing components in milk on the reaction results with no significant effect on detection sensitivity. Compared with using biotin labeled monoclonal antibody, using of secondary antibody-biotin make the detection sensitivity further improved. The minimum detectable concentration in samples of tylosin, tetracycline, gentamicin, streptomycin, and chloramphenicol were 0.3, 1.5, 4, 20, and 25 ng/ml, respectively, and the working ranges of samples were 6-400, 7-300, 8-200, 90-3000 and 70-8000 ng/ml, respectively. The mean recovery was 89.38-113.73% with a standard deviation within 16.62%. The suspension assay technology is powerful for the fast quantitative analysis of multi-antibiotics residue in milk. PMID:21726753

  8. Rapid and multiplex microRNA detection on graphically encoded silica suspension array.

    PubMed

    Jiang, Li; Shen, Ye; Zheng, Kexiao; Li, Jiong

    2014-11-15

    MicroRNA (miRNA), an 18-24-nucleotide noncoding RNA molecule, has become an ideal class of biomarker candidates for clinical diagnosis of cancers. By now, a number of detection methods for miRNAs have been developed on planar arrays and suspension arrays. In this work, we describe a hybridization-triggered fluorescence strategy for label-free and multiplex miRNA detection on graphically encoded silica suspension array. The total RNA is directly applied for analysis with an 8-mer Universal Tag which can be selectively captured by the capture probe via base-stacking effects. Benefiting from base-stacking effects, this novel method exhibits superb discrimination ability toward the 5' and 3' end single-nucleotide alteration. Mature miRNAs can be distinguished from their corresponding pre-miRNAs easily. Moreover, the estimated detection limit of 5 amol is comparable to some of the most sensitive methods. All these mentioned characteristics offer exciting possibilities for discovery and clinical applications. PMID:24892784

  9. Suspension, Race, and Disability: Analysis of Statewide Practices and Reporting

    ERIC Educational Resources Information Center

    Krezmien, Michael P.; Leone, Peter E.; Achilles, Georgianna M.

    2006-01-01

    This analysis of statewide suspension data from 1995 to 2003 in Maryland investigated disproportionate suspensions of minority students and students with disabilities. We found substantial increases in over-all rates of suspensions from 1995 to 2003, as well as disproportionate rates of suspensions for African American students, American Indian…

  10. A decoupled control approach for magnetic suspension systems using electromagnets mounted in a planar array

    NASA Technical Reports Server (NTRS)

    Groom, Nelson J.

    1993-01-01

    A decoupled control approach for a Large Gap Magnetic Suspension System (LGMSS) is presented. The control approach is developed for an LGMSS which provides five degree-of-freedom control of a cylindrical suspended element that contains a core composed of permanent magnet material. The suspended element is levitated above five electromagnets mounted in a planar array. Numerical results are obtained by using the parameters of the Large Angle Magnetic Suspension Test Fixture (LAMSTF) which is a small scale laboratory model LGMSS.

  11. Highly specific DNA detection employing ligation on suspension bead array readout.

    PubMed

    Mezger, Anja; Kühnemund, Malte; Nilsson, Mats; Herthnek, David

    2015-09-25

    We show for the first time that monomerized rolling circle amplification (RCA) products can be directly detected with the Luminex suspension bead array readout without the need of PCR amplification. Furthermore, using monomerized RCA products to guide ligation of the detection oligonucleotide (DO) to barcode sequences on the magnetic Luminex beads, combined with efficient washing and increased measurement temperature, yields a higher signal to noise ratio. As a proof-of-principle, we demonstrate detection of pathogenic DNA sequences with high reproducibility, sensitivity and a dynamic range over four orders of magnitude. Using padlock probes in combination with bead suspension arrays opens up the possibility for highly multiplexed DNA targeting and readout. PMID:25681158

  12. Development of a bead-based suspension array for the detection of pathogens in acute respiratory tract infections.

    PubMed

    Chen, Yu-Sheng; Li, Hong-Ru; Zhang, Wei; Hua, Zhi-Dan; Lin, Xiao-Hong; Lin, Meng-Qing; Huang, Wen-Sen; Huang, Li-Ping; Yu, Xiao-Li; Xu, Neng-Luan; Lin, Ming; Xie, Bao-Song; Shen, Xiao-Na; Xie, Jian-Feng; Wang, Yi; Huang, Meng; Wu, Yan-An; Hu, Xin-Lan

    2016-08-01

    We developed a high-throughput bead-based suspension array for simultaneous detection of 20 respiratory tract pathogens in clinical specimens. Pathogen-specific genes were amplified and hybridized to probes coupled to carboxyl-encoded microspheres. Fluorescence intensities generated via the binding of phycoerythrin-conjugated streptavidin with biotin-labeled targets were measured by the Luminex 100 bead-based suspension array system. The bead-based suspension array detected bacteria in a significantly higher number of samples compared to the conventional culture. There was no significant difference in the detection rate of atypical pathogensatypical pathogens or viruses between the bead-based suspension array and real-time PCR. This technology can play a significant role in screening patients with pneumonia. PMID:27190247

  13. Bead-based suspension array for simultaneous differential detection of five major swine viruses.

    PubMed

    Chen, Ru; Yu, Xiao-Lu; Gao, Xiao-Bo; Xue, Cun-Yi; Song, Chang-Xu; Li, Yan; Cao, Yong-Chang

    2015-01-01

    A novel multiplex detection array based on Luminex xMAP technology was developed and validated for simultaneous detection of five major viruses causing swine reproductive diseases. By combining one-step asymmetric multiplex reverse transcription polymerase chain reaction (RT-PCR) with xMAP bead-based hybridization and flow cytometry analysis, the resulting multiplex assay was capable of detecting single and mixed infections of PRRSV, PCV-2, PRV, CSFV, and PPV in a single reaction. The assay accurately detected and differentiated 23 viral strains used in this study. The low detection limit was determined as 2.2-22 copies/μL (corresponding to 0.5-6.8 fg/μL DNA template) on plasmid constructs containing viral fragments. The intra-assay and inter-assay variances (CV%) were low that ranged from 2.5 to 5.4 % and 4.1 to 7.6 %, respectively. The assay was applied to test field samples and detected single and mixed viral infections. The detection rate was higher than that of uniplex conventional PCR and RT-PCR methods. The detection of PRRSV by the bead-based multiplex assay was comparable with a commercially available real time RT-PCR kit. The test procedure on purified DNA or RNA samples could be completed within 2 h. In conclusion, the bead-based suspension array presented here proved to be a high-throughput practical tool that provided highly specific and sensitive identification of single and multiple infections of five major viruses in pigs and boar semen. PMID:25557628

  14. Comparison of Two Suspension Arrays for Simultaneous Detection of Five Biothreat Bacterial in Powder Samples

    PubMed Central

    Yang, Yu; Wang, Jing; Wen, Haiyan; Liu, Hengchuan

    2012-01-01

    We have developed novel Bio-Plex assays for simultaneous detection of Bacillus anthracis, Yersinia pestis, Brucella spp., Francisella tularensis, and Burkholderia pseudomallei. Universal primers were used to amplify highly conserved region located within the 16S rRNA amplicon, followed by hybridized to pathogen-specific probes for identification of these five organisms. The other assay is based on multiplex PCR to simultaneously amplify five species-specific pathogen identification-targeted regions unique to individual pathogen. Both of the two arrays are validated to be flexible and sensitive for simultaneous detection of bioterrorism bacteria. However, universal primer PCR-based array could not identify Bacillus anthracis, Yersinia pestis, and Brucella spp. at the species level because of the high conservation of 16S rDNA of the same genus. The two suspension arrays can be utilized to detect Bacillus anthracis sterne spore and Yersinia pestis EV76 from mimic “write powder” samples, they also proved that the suspension array system will be valuable tools for diagnosis of bacterial biothreat agents in environmental samples. PMID:22690123

  15. Comparison of two suspension arrays for simultaneous detection of five biothreat bacterial in powder samples.

    PubMed

    Yang, Yu; Wang, Jing; Wen, Haiyan; Liu, Hengchuan

    2012-01-01

    We have developed novel Bio-Plex assays for simultaneous detection of Bacillus anthracis, Yersinia pestis, Brucella spp., Francisella tularensis, and Burkholderia pseudomallei. Universal primers were used to amplify highly conserved region located within the 16S rRNA amplicon, followed by hybridized to pathogen-specific probes for identification of these five organisms. The other assay is based on multiplex PCR to simultaneously amplify five species-specific pathogen identification-targeted regions unique to individual pathogen. Both of the two arrays are validated to be flexible and sensitive for simultaneous detection of bioterrorism bacteria. However, universal primer PCR-based array could not identify Bacillus anthracis, Yersinia pestis, and Brucella spp. at the species level because of the high conservation of 16S rDNA of the same genus. The two suspension arrays can be utilized to detect Bacillus anthracis sterne spore and Yersinia pestis EV76 from mimic "write powder" samples, they also proved that the suspension array system will be valuable tools for diagnosis of bacterial biothreat agents in environmental samples. PMID:22690123

  16. Nanoelectrode array for electrochemical analysis

    DOEpatents

    Yelton, William G.; Siegal, Michael P.

    2009-12-01

    A nanoelectrode array comprises a plurality of nanoelectrodes wherein the geometric dimensions of the electrode controls the electrochemical response, and the current density is independent of time. By combining a massive array of nanoelectrodes in parallel, the current signal can be amplified while still retaining the beneficial geometric advantages of nanoelectrodes. Such nanoelectrode arrays can be used in a sensor system for rapid, non-contaminating field analysis. For example, an array of suitably functionalized nanoelectrodes can be incorporated into a small, integrated sensor system that can identify many species rapidly and simultaneously under field conditions in high-resistivity water, without the need for chemical addition to increase conductivity.

  17. Suspensions

    NASA Astrophysics Data System (ADS)

    Braccini, Stefano

    2000-06-01

    Special suspension systems are used in gravitational wave detectors to reduce the transmission of seismic vibrations to test masses by many orders of magnitude. In ground-based interferometric antennas, this allows to detect gravitational signals even below a few tens of Hz, where seismic vibrations are very strong. The state of the art on this topic is presented. .

  18. Open-loop characteristics of magnetic suspension systems using electromagnets mounted in a planar array

    NASA Technical Reports Server (NTRS)

    Groom, Nelson J.; Britcher, Colin P.

    1992-01-01

    The open-loop characteristics of a Large-Gap Magnetic Suspension System (LGMSS) were studied and numerical results are presented. The LGMSS considered provides five-degree-of-freedom control. The suspended element is a cylinder that contains a core composed of permanent magnet material. The magnetic actuators are air core electromagnets mounted in a planar array. Configurations utilizing five, six, seven, and eight electromagnets were investigated and all configurations were found to be controllable from coil currents and observable from suspended element positions. Results indicate that increasing the number of coils has an insignificant effect on mode shapes and frequencies.

  19. Optical analysis of red blood cell suspension

    NASA Astrophysics Data System (ADS)

    Szołna, Alicja A.; Grzegorzewski, Bronisław

    2008-12-01

    The optical properties of suspensions of red blood cells (RBCs) were studied. Fresh human venues blood was obtained from adult healthy donors. RBCs were suspended in isotonic salt solution, and in autologous plasma. Suspensions with haematocrit 0.25 - 3% were investigated. Novel technique was proposed to determine the scattering coefficient μs for the suspensions. The intensity of He-Ne laser light transmitted through a wedge-shape container filled with a suspension was recorded. To find the dependence of the intensity on the thickness of the sample the container was moved horizontally. The dependence of μs on the haematocrit was determined for RBCs suspended in the isotonic salt solution. RBCs suspended in plasma tend to form rouleaux. For the RBCs suspended in plasma, the scattering coefficient as a function of time was obtained. It is shown that this technique can be useful in the study of rouleaux formation.

  20. Rapid oligonucleotide suspension array-based multiplex detection of bacterial pathogens.

    PubMed

    Zhao, Jinyin; Kang, Lin; Hu, Rui; Gao, Shan; Xin, Wenwen; Chen, Weijun; Wang, Jinglin

    2013-10-01

    A gene-specific microsphere suspension array coupled with 15-plex polymerase chain reaction (PCR) was developed to screen bacterial samples rapidly for 10 strains of bacteria: Shigella spp. (S. flexneri, S. dysenteriae, and S. sonnei), Staphylococcus aureus, Vibrio cholerae (serology O1 and O139), Legionella pneumophila, and Clostridium botulinum (types A, B, and E). Fifteen sets of highly validated primers were chosen to amplify target genes simultaneously. Corresponding oligonucleotide probes directly conjugated with microsphere sets were used to specifically identify PCR amplicons. Sensitivity tests revealed that the array coupled with single PCR was able to detect purified genomic DNA at concentrations as low as 10 copies/μL, while the multiplex detection limit was 10-10⁴ copies/μL. The assay was validated using water samples artificially spiked with S. aureus and S. dysenteriae, as well as water specimens from swimming pools previously identified to contain S. aureus. PMID:23947819

  1. Application of suspension array for simultaneous detection of four different mycotoxins in corn and peanut.

    PubMed

    Wang, Ying; Ning, Baoan; Peng, Yuan; Bai, Jialei; Liu, Ming; Fan, Xianjun; Sun, Zhiyong; Lv, Zhiqiang; Zhou, Caihong; Gao, Zhixian

    2013-03-15

    Mycotoxins are highly toxic contaminants in foodstuffs and feedstuffs. The study presents a novel suspension array technology for quantifying four mycotoxins, namely, aflatoxin B1, deoxynivalenol, T-2 toxin, and zearalenone, in corn and peanut. Using 1-ethyl-3-(3-dimethylaminopropyl) carbodiimide hydrochloride, the complete antigens of the mycotoxins became attached to the microspheres with viable activity. The optimal concentrations of each antibody and biotin-rabbit anti-goat IgG were obtained through chessboard titration. The four mycotoxins were detected simultaneously and quantitatively in corn and peanut using indirect competitive immunoassay. Multi-channel standard curves with appropriate logistic correlation (R(2)>0.9819) were respectively plotted. The broad working ranges with three to four orders of magnitude were calculated, and limits of detection at the pg level were found to be better than those obtained using high-performance liquid chromatography. The recovery rates in the actual samples generally ranged from 80.16% to 117.65%, with an intra-assay coefficient of variation lower than 15%, which indicated high accuracy and repeatability. A suspension array method for the simultaneous detection of the four mycotoxins within 4h was successfully developed using minimal samples; the method was proven to have high throughput, flexibility, accuracy and reproducibility. The approach could detect multiple contaminants in actual samples. PMID:23017676

  2. Towards a peptide-based suspension array for the detection of pestivirus antibodies in swine.

    PubMed

    van der Wal, Fimme J; Jelsma, Tinka; Fijten, Helmi; Achterberg, René P; Loeffen, Willie L A

    2016-09-01

    Classical swine fever (CSF) is a highly contagious and lethal disease in swine. Serological tests for the diagnosis of CSF need not only to detect antibodies against CSFV, but also need to differentiate these from antibodies against other pestiviruses. To investigate the possibilities of specific peptide-based serology, various synthetic peptides that represent a well-described linear epitope of the CSFV E2 protein (TAVSPTTLR) were used to test the viability of a peptide-based suspension array for the detection of antibodies against pestiviruses in swine. The results show that N-terminally biotinylated peptides can bind to avidin conjugated beads, and function in detection of the corresponding monoclonal antibody WH303. There are indications that the length of the spacer between epitope and biotin affect the efficiency of the peptide-antibody interaction. A protocol was established that enables probing for antibodies in porcine sera, where neutravidin-blocking of serum and the use of empty control beads for normalization was crucial. With a set of porcine sera with antibodies against various pestiviruses, the proof of concept of a peptide-based suspension array for specific detection of antibodies against pestiviruses in porcine sera was demonstrated. PMID:27166561

  3. Species-specific identification of seven vegetable oils based on suspension bead array.

    PubMed

    Li, Yuanyuan; Wu, Yajun; Han, Jianxun; Wang, Bin; Ge, Yiqiang; Chen, Ying

    2012-03-01

    Species adulteration of vegetable oils has become a main form of adulteration in vegetable oils, severely violating consumer rights and causing disorder in the market. A reliable method of species authentication of vegetable oils is desirable. This paper reports a novel method for identification of seven species of vegetable oils based on suspension bead array. One pair of universal primers and seven species-specific probes were designed targeting rbcl gene of the chloroplast. Each probe was coupled to a unique color-coded microsphere. Biotinylated PCR amplicons of seven oils were hybridized to the complementary probes on microsphere sets. Bound amplicons were detected fluorometrically using a reporter dye, streptavidin-R-phycoeryt hrin (SA-PE). A sample could be analyzed less than 1 h after PCR amplification. With the exception of olive probe, all probes showed no cross-reactivity with other species. Absolute detection limit of the seven probes ranged from 0.01 ng/μL to 0.0001 ng/μL. Detection limit in DNA mixture was from 10% to 5%. Detection of vegetable oils validated the effectiveness of the method. The suspension bead array as a rapid, sensitive, and high-throughput technology has potential to identify more species of vegetable oils with increased species of probes. PMID:22324365

  4. A photonic crystal hydrogel suspension array for the capture of blood cells from whole blood

    NASA Astrophysics Data System (ADS)

    Zhang, Bin; Cai, Yunlang; Shang, Luoran; Wang, Huan; Cheng, Yao; Rong, Fei; Gu, Zhongze; Zhao, Yuanjin

    2016-02-01

    Diagnosing hematological disorders based on the separation and detection of cells in the patient's blood is a significant challenge. We have developed a novel barcode particle-based suspension array that can simultaneously capture and detect multiple types of blood cells. The barcode particles are polyacrylamide (PAAm) hydrogel inverse opal microcarriers with characteristic reflection peak codes that remain stable during cell capture on their surfaces. The hydrophilic PAAm hydrogel scaffolds of the barcode particles can entrap various plasma proteins to capture different cells in the blood, with little damage to captured cells.Diagnosing hematological disorders based on the separation and detection of cells in the patient's blood is a significant challenge. We have developed a novel barcode particle-based suspension array that can simultaneously capture and detect multiple types of blood cells. The barcode particles are polyacrylamide (PAAm) hydrogel inverse opal microcarriers with characteristic reflection peak codes that remain stable during cell capture on their surfaces. The hydrophilic PAAm hydrogel scaffolds of the barcode particles can entrap various plasma proteins to capture different cells in the blood, with little damage to captured cells. Electronic supplementary information (ESI) available. See DOI: 10.1039/c5nr06368j

  5. Implementation of a decoupled controller for a magnetic suspension system using electromagnets mounted in a planar array

    NASA Technical Reports Server (NTRS)

    Cox, D. E.; Groom, N. J.

    1994-01-01

    An implementation of a decoupled, single-input/single-output control approach for a large angle magnetic suspension test fixture is described. Numerical and experimental results are presented. The experimental system is a laboratory model large gap magnetic suspension system which provides five degree-of-freedom control of a cylindrical suspended element. The suspended element contains a core composed of permanent magnet material and is levitated above five electromagnets mounted in a planar array.

  6. Comparison of printed glycan array, suspension array and ELISA in the detection of human anti-glycan antibodies.

    PubMed

    Pochechueva, Tatiana; Jacob, Francis; Goldstein, Darlene R; Huflejt, Margaret E; Chinarev, Alexander; Caduff, Rosemarie; Fink, Daniel; Hacker, Neville; Bovin, Nicolai V; Heinzelmann-Schwarz, Viola

    2011-12-01

    Anti-glycan antibodies represent a vast and yet insufficiently investigated subpopulation of naturally occurring and adaptive antibodies in humans. Recently, a variety of glycan-based microarrays emerged, allowing high-throughput profiling of a large repertoire of antibodies. As there are no direct approaches for comparison and evaluation of multi-glycan assays we compared three glycan-based immunoassays, namely printed glycan array (PGA), fluorescent microsphere-based suspension array (SA) and ELISA for their efficacy and selectivity in profiling anti-glycan antibodies in a cohort of 48 patients with and without ovarian cancer. The ABO blood group glycan antigens were selected as well recognized ligands for sensitivity and specificity assessments. As another ligand we selected P(1), a member of the P blood group system recently identified by PGA as a potential ovarian cancer biomarker. All three glyco-immunoassays reflected the known ABO blood groups with high performance. In contrast, anti-P(1) antibody binding profiles displayed much lower concordance. Whilst anti-P(1) antibody levels between benign controls and ovarian cancer patients were significantly discriminated using PGA (p=0.004), we got only similar results using SA (p=0.03) but not for ELISA. Our findings demonstrate that whilst assays were largely positively correlated, each presents unique characteristic features and should be validated by an independent patient cohort rather than another array technique. The variety between methods presumably reflects the differences in glycan presentation and the antigen/antibody ratio, assay conditions and detection technique. This indicates that the glycan-antibody interaction of interest has to guide the assay selection. PMID:21948103

  7. Rapid, Multiplexed Characterization of Shiga Toxin-Producing Escherichia coli (STEC) Isolates Using Suspension Array Technology.

    PubMed

    Carter, John M; Lin, Andrew; Clotilde, Laurie; Lesho, Matthew

    2016-01-01

    Molecular methods have emerged as the most reliable techniques to detect and characterize pathogenic Escherichia coli. These molecular techniques include conventional single analyte and multiplex PCR, PCR followed by microarray detection, pulsed-field gel electrophoresis (PFGE), and whole genome sequencing. The choice of methods used depends upon the specific needs of the particular study. One versatile method involves detecting serogroup-specific markers by hybridization or binding to encoded microbeads in a suspension array. This molecular serotyping method has been developed and adopted for investigating E. coli outbreaks. The major advantages of this technique are the ability to simultaneously serotype E. coli and detect the presence of virulence and pathogenicity markers. Here, we describe the development of a family of multiplex molecular serotyping methods for Shiga toxin-producing E. coli, compare their performance to traditional serotyping methods, and discuss the cost-benefit balance of these methods in the context of various food safety objectives. PMID:27242670

  8. Rapid, Multiplexed Characterization of Shiga Toxin-Producing Escherichia coli (STEC) Isolates Using Suspension Array Technology

    PubMed Central

    Carter, John M.; Lin, Andrew; Clotilde, Laurie; Lesho, Matthew

    2016-01-01

    Molecular methods have emerged as the most reliable techniques to detect and characterize pathogenic Escherichia coli. These molecular techniques include conventional single analyte and multiplex PCR, PCR followed by microarray detection, pulsed-field gel electrophoresis (PFGE), and whole genome sequencing. The choice of methods used depends upon the specific needs of the particular study. One versatile method involves detecting serogroup-specific markers by hybridization or binding to encoded microbeads in a suspension array. This molecular serotyping method has been developed and adopted for investigating E. coli outbreaks. The major advantages of this technique are the ability to simultaneously serotype E. coli and detect the presence of virulence and pathogenicity markers. Here, we describe the development of a family of multiplex molecular serotyping methods for Shiga toxin-producing E. coli, compare their performance to traditional serotyping methods, and discuss the cost-benefit balance of these methods in the context of various food safety objectives. PMID:27242670

  9. Microsphere suspension array assays for detection and differentiation of Hendra and Nipah viruses.

    PubMed

    Foord, Adam J; White, John R; Colling, Axel; Heine, Hans G

    2013-01-01

    Microsphere suspension array systems enable the simultaneous fluorescent identification of multiple separate nucleotide targets in a single reaction. We have utilized commercially available oligo-tagged microspheres (Luminex MagPlex-TAG) to construct and evaluate multiplexed assays for the detection and differentiation of Hendra virus (HeV) and Nipah virus (NiV). Both these agents are bat-borne zoonotic paramyxoviruses of increasing concern for veterinary and human health. Assays were developed targeting multiple sites within the nucleoprotein (N) and phosphoprotein (P) encoding genes. The relative specificities and sensitivities of the assays were determined using reference isolates of each virus type, samples from experimentally infected horses, and archival veterinary diagnostic submissions. Results were assessed in direct comparison with an established qPCR. The microsphere array assays achieved unequivocal differentiation of HeV and NiV and the sensitivity of HeV detection was comparable to qPCR, indicating high analytical and diagnostic specificity and sensitivity. PMID:23509705

  10. Microsphere Suspension Array Assays for Detection and Differentiation of Hendra and Nipah Viruses

    PubMed Central

    Foord, Adam J.; White, John R.; Colling, Axel; Heine, Hans G.

    2013-01-01

    Microsphere suspension array systems enable the simultaneous fluorescent identification of multiple separate nucleotide targets in a single reaction. We have utilized commercially available oligo-tagged microspheres (Luminex MagPlex-TAG) to construct and evaluate multiplexed assays for the detection and differentiation of Hendra virus (HeV) and Nipah virus (NiV). Both these agents are bat-borne zoonotic paramyxoviruses of increasing concern for veterinary and human health. Assays were developed targeting multiple sites within the nucleoprotein (N) and phosphoprotein (P) encoding genes. The relative specificities and sensitivities of the assays were determined using reference isolates of each virus type, samples from experimentally infected horses, and archival veterinary diagnostic submissions. Results were assessed in direct comparison with an established qPCR. The microsphere array assays achieved unequivocal differentiation of HeV and NiV and the sensitivity of HeV detection was comparable to qPCR, indicating high analytical and diagnostic specificity and sensitivity. PMID:23509705

  11. Collision rates for rare cell capture in periodic obstacle arrays strongly depend on density of cell suspension.

    PubMed

    Cimrák, I

    2016-11-01

    Recently, computational modelling has been successfully used for determination of collision rates for rare cell capture in periodic obstacle arrays. The models were based on particle advection simulations where the cells were advected according to velocity field computed from two dimensional Navier-Stokes equations. This approach may be used under the assumption of very dilute cell suspensions where no mutual cell collisions occur. We use the object-in-fluid framework to demonstrate that even with low cell-to-fluid ratio, the optimal geometry of the obstacle array significantly changes. We show computational simulations for ratios of 3.5, 6.9 and 10.4% determining the optimal geometry of the periodic obstacle arrays. It was already previously demonstrated that cells in periodic obstacle arrays follow trajectories in two modes: the colliding mode and the zig-zag mode. The colliding mode maximizes the cell-obstacle collision frequency. Our simulations reveal that for dilute suspensions and for suspensions with cell-to-fluid ratio 3.5%, there is a range of column shifts for which the cells follow colliding trajectories. However we showed, that for 6.9 and 10.4%, the cells never follow colliding trajectories. PMID:27023645

  12. Analysis of phased-array diode lasers

    SciTech Connect

    Hardy, A.; Streifer, W.

    1985-07-01

    An improved, more accurate analysis of phased-array diode lasers is presented, which yields results that differ both qualitatively and quantitatively from those previously employed. A numerical example indicating decreased splitting in array mode gains is included.

  13. High sensitive immunoassay for multiplex mycotoxin detection with photonic crystal microsphere suspension array.

    PubMed

    Deng, Guozhe; Xu, Kun; Sun, Yue; Chen, Yu; Zheng, Tiesong; Li, Jianlin

    2013-03-01

    A novel, sensitive, and high throughput competitive immunoassay for multiplex mycotoxins was established by immobilizing the artificial antigens (Ags) of mycotoxins on the surfaces of three kinds of silica photonic crystal microsphere (SPCM) suspension arrays. The SPCMs were encoded by their reflectance peak positions. Aflatoxin B1 (AFB1), fumonisin B1 (FB1), and citrinin (CIT) spiked in the cereals were extracted, and the fluorescein isothiocyanate (FITC) labeled antibodies (Abs) of these mycotoxins were added into the centrifuge tube which contained the SPCMs of the modified artificial antigens (Ags). The fluorescence signal was collected by an array fluorescent scanner. The limit of detection (LOD) was as low as 0.5, 1, and 0.8 pg/mL for AFB1, FB1, and CIT, respectively. The new method provided a wide linear detection range from 0.001 to 10, 0.001 to 10, and 0.001 to 1 ng/mL for AFB1, FB1, and CIT, respectively. The mean recovery rates are in range of 74.7 ± 4.0% to 127.9 ± 4.4% for the three mycotoxins in corn, peanuts, and wheat. The developed method for mycotoxins was used to assay the AFB1, FB1, and CIT level in 10 naturally contaminated cereal samples, and the results of detection were in agreement with that of a classic enzyme-linked immunosorbent assay (ELISA) method. This method saves a large amount of reagents (10 μL volume) and detection time (<3 h) for multiplex mycotoxin assay. PMID:23350906

  14. CST Suspension Analysis for Slurry Pumps of Tank 40

    SciTech Connect

    LEE, SIY.

    2004-04-01

    Tank 40 simulation models with four submersible slurry pumps available for the CST suspension operations have been developed to provide operational guidance of slurry pumps for an efficient sludge removal. A series of the modeling calculations have been performed for key operational parameters such as pump operation mode, number of operating pumps, and to provide a recommendation for CST suspension and mixing operations in Tank 40. Reference design and operating conditions shown in Table 1 were used to perform the modeling analysis of the tank CST mixing. In the analysis, the pump was assumed to be stationary or rotating. Solid obstructions including the pump housing, the 14 inches riser, and 6.75-ft tank support column were included in the simulation models. Free surface motion of the tank liquid was neglected for high tank liquid level using the literature information. Steady-state and transient analyses with a two-equation turbulence model were performed with FLUENTTM. All analyses we re based on three-dimensional results. A suspension capability was evaluated assuming that local fluid velocity can be used as a measure of CST suspension and mixing. For a minimum suspension velocity of 1.1 ft/sec for the largest CST size of 700 microns, the results indicated that at least two existing slurry mixers running at 3800 gpm flowrate per nozzle could keep CST solids suspended from the tank with a 200 in liquid level. In this case, the exception is for the fluid region with less than 20 wt contents of CST material. This is based on the conservative assumption that the largest CST size of 700 micron diameter remains unchanged neglecting a friable effect during the entire period of pump operations. The length of time that the CST material is exposed to the liquid stream lower than minimum suspension velocity is also important in affecting the ability of the liquid stream to suspend CST particle, and this effect is quantified in the present analysis by using the literature

  15. Extraction and Analysis of C60, C70 and PCBM in Aqueous Suspensions

    EPA Science Inventory

    The goal of this work is to develop sampling and analytical methodologies for extracting and quantifying fullerenes in aqueous colloidal suspensions. Sampling and analysis of colloidal suspensions pose some unique challenges not encountered when working with true solutions. For...

  16. Development of a Multiplexed Bead-Based Suspension Array for the Detection and Discrimination of Pospiviroid Plant Pathogens

    PubMed Central

    van Brunschot, Sharon L.; Bergervoet, Jan H. W.; Pagendam, Daniel E.; de Weerdt, Marjanne; Geering, Andrew D. W.; Drenth, André; van der Vlugt, René A. A.

    2014-01-01

    Efficient and reliable diagnostic tools for the routine indexing and certification of clean propagating material are essential for the management of pospiviroid diseases in horticultural crops. This study describes the development of a true multiplexed diagnostic method for the detection and identification of all nine currently recognized pospiviroid species in one assay using Luminex bead-based suspension array technology. In addition, a new data-driven, statistical method is presented for establishing thresholds for positivity for individual assays within multiplexed arrays. When applied to the multiplexed array data generated in this study, the new method was shown to have better control of false positives and false negative results than two other commonly used approaches for setting thresholds. The 11-plex Luminex MagPlex-TAG pospiviroid array described here has a unique hierarchical assay design, incorporating a near-universal assay in addition to nine species-specific assays, and a co-amplified plant internal control assay for quality assurance purposes. All assays of the multiplexed array were shown to be 100% specific, sensitive and reproducible. The multiplexed array described herein is robust, easy to use, displays unambiguous results and has strong potential for use in routine pospiviroid indexing to improve disease management strategies. PMID:24404188

  17. F-Canyon Suspension and Deactivation Safety Analysis Reports

    SciTech Connect

    LOW, JM

    2004-04-30

    This paper describes Savannah River Site's compliance with the Department of Energy (DOE) direction to suspend current operations, transition to accommodate revised facility missions, and initiate operations to deactivate F-Canyon using a suspension and deactivation safety basis. This paper integrates multiple Workshop theme topics - Lessons Learned from the Safety Analysis Process, Improvements in Documenting Hazard and Accident Analysis, and Closure Issues - Decontamination and Decommissioning. The paper describes the process used to develop safety documentation to support suspension and deactivation activities for F-Canyon. Embodied are descriptive efforts that include development of intermediate and final ''end states'' (e.g., transitional operations), preparation of safety bases documents to support transition, performance of suspension and deactivation activities (e.g. solvent washing, tank/sump flushing, and laboratory waste processing), and downgrade of Safety Class and Safety Significant equipment. The reduction and/or removal of hazards in the facility result in significant risk (frequency times consequence) reduction to the public, site workers, and the environment. Risk reduction then allows the downgrade of safety class and safety significant systems (e.g., ventilation system) and elimination of associated surveillances. The downgrade of safety systems results in significant cost savings.

  18. Analysis of cyclic combustion of the coal-water suspension

    NASA Astrophysics Data System (ADS)

    Kijo-Kleczkowska, Agnieszka

    2011-04-01

    Combustion technology of the coal-water suspension creates a number of new possibilities to organize the combustion process fulfilling contemporary requirements, e.g. in the environment protection. Therefore the in-depth analysis is necessary to examine the technical application of coal as a fuel in the form of suspension. The research undertakes the complex investigations of the continuous coal-water suspension as well as cyclic combustion. The cyclic nature of fuel combustion results from the movement of the loose material in the flow contour of the circulating fluidized bed (CFB): combustion chamber, cyclone and downcomer. The experimental results proved that the cyclic change of oxygen concentration around fuel, led to the vital change of both combustion mechanisms and combustion kinetics. The mathematical model of the process of fuel combustion has been presented. Its original concept is based on the allowance for cyclic changes of concentrations of oxygen around the fuel. It enables the prognosis for change of the surface and the centre temperatures as well as mass loss of the fuel during combustion in air, in the fluidized bed and during the cyclic combustion.

  19. CAPweb: a bioinformatics CGH array Analysis Platform.

    PubMed

    Liva, Stéphane; Hupé, Philippe; Neuvial, Pierre; Brito, Isabel; Viara, Eric; La Rosa, Philippe; Barillot, Emmanuel

    2006-07-01

    Assessing variations in DNA copy number is crucial for understanding constitutional or somatic diseases, particularly cancers. The recently developed array-CGH (comparative genomic hybridization) technology allows this to be investigated at the genomic level. We report the availability of a web tool for analysing array-CGH data. CAPweb (CGH array Analysis Platform on the Web) is intended as a user-friendly tool enabling biologists to completely analyse CGH arrays from the raw data to the visualization and biological interpretation. The user typically performs the following bioinformatics steps of a CGH array project within CAPweb: the secure upload of the results of CGH array image analysis and of the array annotation (genomic position of the probes); first level analysis of each array, including automatic normalization of the data (for correcting experimental biases), breakpoint detection and status assignment (gain, loss or normal); validation or deletion of the analysis based on a summary report and quality criteria; visualization and biological analysis of the genomic profiles and results through a user-friendly interface. CAPweb is accessible at http://bioinfo.curie.fr/CAPweb. PMID:16845053

  20. Efficient analysis for infinite microstrip dipole arrays

    NASA Astrophysics Data System (ADS)

    Wright, S. M.; Lo, Y. T.

    1983-11-01

    A moment method analysis of infinite microstrip dipole arrays which uses an efficient technique to evaluate the generalized impedance matrix is described. A particularly simple formulation is obtained through the use of the periodic Green function. Results for the reflection coefficient magnitude against scan angle are given for a typical array.

  1. Stability considerations for magnetic suspension systems using electromagnets mounted in a planar array

    NASA Technical Reports Server (NTRS)

    Groom, Nelson J.; Britcher, Colin P.

    1991-01-01

    Mathematical models of a 5, 6, 7, and 8 coil large gap magnetic suspension system (MSDS) are presented. Some of the topics covered include: force and torque equations, reduction of state-space form, natural modes, origins of modes, effect of rotation in azimuth (yaw), future work, and n-coil ring conclusions.

  2. Viscosity of dilute suspensions of rigid bead arrays at low shear: accounting for the variation in hydrodynamic stress over the bead surfaces.

    PubMed

    Allison, Stuart A; Pei, Hongxia

    2009-06-11

    In this work, we examine the viscosity of a dilute suspension of irregularly shaped particles at low shear. A particle is modeled as a rigid array of nonoverlapping beads of variable size and geometry. Starting from a boundary element formalism, approximate account is taken of the variation in hydrodynamic stress over the surface of the individual beads. For a touching dimer of two identical beads, the predicted viscosity is lower than the exact value by 5.2%. The methodology is then applied to several other model systems including tetramers of variable conformation and linear strings of touching beads. An analysis is also carried out of the viscosity and translational diffusion of several dilute amino acids and diglycine in water. It is concluded that continuum hydrodynamic modeling with stick boundary conditions is unable to account for the experimental viscosity and diffusion data simultaneously. A model intermediate between "stick" and "slip" could possibly reconcile theory and experiment. PMID:19453112

  3. Fault Analysis in Solar Photovoltaic Arrays

    NASA Astrophysics Data System (ADS)

    Zhao, Ye

    Fault analysis in solar photovoltaic (PV) arrays is a fundamental task to increase reliability, efficiency and safety in PV systems. Conventional fault protection methods usually add fuses or circuit breakers in series with PV components. But these protection devices are only able to clear faults and isolate faulty circuits if they carry a large fault current. However, this research shows that faults in PV arrays may not be cleared by fuses under some fault scenarios, due to the current-limiting nature and non-linear output characteristics of PV arrays. First, this thesis introduces new simulation and analytic models that are suitable for fault analysis in PV arrays. Based on the simulation environment, this thesis studies a variety of typical faults in PV arrays, such as ground faults, line-line faults, and mismatch faults. The effect of a maximum power point tracker on fault current is discussed and shown to, at times, prevent the fault current protection devices to trip. A small-scale experimental PV benchmark system has been developed in Northeastern University to further validate the simulation conclusions. Additionally, this thesis examines two types of unique faults found in a PV array that have not been studied in the literature. One is a fault that occurs under low irradiance condition. The other is a fault evolution in a PV array during night-to-day transition. Our simulation and experimental results show that overcurrent protection devices are unable to clear the fault under "low irradiance" and "night-to-day transition". However, the overcurrent protection devices may work properly when the same PV fault occurs in daylight. As a result, a fault under "low irradiance" and "night-to-day transition" might be hidden in the PV array and become a potential hazard for system efficiency and reliability.

  4. An Analysis of the Mt. Meron Seismic Array

    SciTech Connect

    Pasyanos, M E; Ryall, F

    2008-01-10

    We have performed a quick analysis of the Mt. Meron seismic array to monitor regional seismic events in the Middle East. The Meron array is the only current array in the Levant and Arabian Peninsula and, as such, might be useful in contributing to event location, identification, and other analysis. Here, we provide a brief description of the array and a review of the travel time and array analysis done to assess its performance.

  5. Modal Analysis Using Co-Prime Arrays

    NASA Astrophysics Data System (ADS)

    Pakrooh, Pooria; Scharf, Louis L.; Pezeshki, Ali

    2016-05-01

    Let a measurement consist of a linear combination of damped complex exponential modes, plus noise. The problem is to estimate the parameters of these modes, as in line spectrum estimation, vibration analysis, speech processing, system identification, and direction of arrival estimation. Our results differ from standard results of modal analysis to the extent that we consider sparse and co-prime samplings in space, or equivalently sparse and co-prime samplings in time. Our main result is a characterization of the orthogonal subspace. This is the subspace that is orthogonal to the signal subspace spanned by the columns of the generalized Vandermonde matrix of modes in sparse or co-prime arrays. This characterization is derived in a form that allows us to adapt modern methods of linear prediction and approximate least squares, such as iterative quadratic maximum likelihood (IQML), for estimating mode parameters. Several numerical examples are presented to demonstrate the validity of the proposed modal estimation methods, and to compare the fidelity of modal estimation with sparse and co-prime arrays, versus SNR. Our calculations of Cram\\'{e}r-Rao bounds allow us to analyze the loss in performance sustained by sparse and co-prime arrays that are compressions of uniform linear arrays.

  6. Performance Analysis of ICA in Sensor Array.

    PubMed

    Cai, Xin; Wang, Xiang; Huang, Zhitao; Wang, Fenghua

    2016-01-01

    As the best-known scheme in the field of Blind Source Separation (BSS), Independent Component Analysis (ICA) has been intensively used in various domains, including biomedical and acoustics applications, cooperative or non-cooperative communication, etc. While sensor arrays are involved in most of the applications, the influence on the performance of ICA of practical factors therein has not been sufficiently investigated yet. In this manuscript, the issue is researched by taking the typical antenna array as an illustrative example. Factors taken into consideration include the environment noise level, the properties of the array and that of the radiators. We analyze the analytic relationship between the noise variance, the source variance, the condition number of the mixing matrix and the optimal signal to interference-plus-noise ratio, as well as the relationship between the singularity of the mixing matrix and practical factors concerned. The situations where the mixing process turns (nearly) singular have been paid special attention to, since such circumstances are critical in applications. Results and conclusions obtained should be instructive when applying ICA algorithms on mixtures from sensor arrays. Moreover, an effective countermeasure against the cases of singular mixtures has been proposed, on the basis of previous analysis. Experiments validating the theoretical conclusions as well as the effectiveness of the proposed scheme have been included. PMID:27164100

  7. Performance Analysis of ICA in Sensor Array

    PubMed Central

    Cai, Xin; Wang, Xiang; Huang, Zhitao; Wang, Fenghua

    2016-01-01

    As the best-known scheme in the field of Blind Source Separation (BSS), Independent Component Analysis (ICA) has been intensively used in various domains, including biomedical and acoustics applications, cooperative or non-cooperative communication, etc. While sensor arrays are involved in most of the applications, the influence on the performance of ICA of practical factors therein has not been sufficiently investigated yet. In this manuscript, the issue is researched by taking the typical antenna array as an illustrative example. Factors taken into consideration include the environment noise level, the properties of the array and that of the radiators. We analyze the analytic relationship between the noise variance, the source variance, the condition number of the mixing matrix and the optimal signal to interference-plus-noise ratio, as well as the relationship between the singularity of the mixing matrix and practical factors concerned. The situations where the mixing process turns (nearly) singular have been paid special attention to, since such circumstances are critical in applications. Results and conclusions obtained should be instructive when applying ICA algorithms on mixtures from sensor arrays. Moreover, an effective countermeasure against the cases of singular mixtures has been proposed, on the basis of previous analysis. Experiments validating the theoretical conclusions as well as the effectiveness of the proposed scheme have been included. PMID:27164100

  8. Rethinking Suspensions

    ERIC Educational Resources Information Center

    Stetson, Frank H.; Collins, Betty J.

    2010-01-01

    The overrepresentation of the Black and Hispanic subgroups in suspension data is a national problem and a troubling issue for schools and school systems across the United States. In Maryland, an analysis of student suspensions by school districts for the 2006-2007 school year revealed disproportionality issues. In 23 of the 24 jurisdictions,…

  9. Optical position measurement for a large gap magnetic suspension system: Design and performance analysis

    NASA Technical Reports Server (NTRS)

    Welch, Sharon S.; Clemmons, James I., Jr.; Shelton, Kevin J.; Duncan, Walter C.

    1994-01-01

    An optical measurement system (OMS) has been designed and tested for a large gap magnetic suspension system (LGMSS). The LGMSS will be used to study control laws for magnetic suspension systems for vibration isolation and pointing applications. The LGMSS features six degrees of freedom and consists of a planar array of electromagnets that levitate and position a cylindrical element containing a permanent magnet core. The OMS provides information on the location and orientation of the element to the LGMSS control system to stabilize suspension. The hardware design of this optical sensing system and the tracking algorithms are presented. The results of analyses and experiments are presented that define the accuracy limits of the optical sensing system and that quantify the errors in position estimation.

  10. Frequency analysis of a semi-active suspension with magneto-rheological dampers

    NASA Astrophysics Data System (ADS)

    Andronic, Florin; Mihai, Ioan; Suciu, Cornel; Beniuga, Marius

    2015-02-01

    Suspension systems for motor vehicles are constantly evolving in order to ensure vehicle stability and traffic safety under all driving conditions. The present work aims to highlight the influence factors in the case of a quarter car model for semi-active suspensions. The functions that must be met by such suspension systems are first presented. Mathematical models for passive systems are first illustrated and then customized for the semi-active case. A simulation diagram was conceived for Matlab Simulink. The obtained simulation results allow conducting a frequency analysis of the passive and semi-active cases of the quarter car model. Various charts for Passive Suspension Transmissibility and for the Effect of Damping on Vertical Acceleration Response were obtained for both passive and semi-active situations. Analysis of obtained results allowed evaluating of the suspension systems behavior and their frequency dependence. Significant differences were found between the behaviors of passive and semi-active suspensions. It was found that semi-active suspensions ensure damping in accordance to the chosen control method, and are much more efficient than passive ones.

  11. Parametric analysis of ATM solar array.

    NASA Technical Reports Server (NTRS)

    Singh, B. K.; Adkisson, W. B.

    1973-01-01

    The paper discusses the methods used for the calculation of ATM solar array performance characteristics and provides the parametric analysis of solar panels used in SKYLAB. To predict the solar array performance under conditions other than test conditions, a mathematical model has been developed. Four computer programs have been used to convert the solar simulator test data to the parametric curves. The first performs module summations, the second determines average solar cell characteristics which will cause a mathematical model to generate a curve matching the test data, the third is a polynomial fit program which determines the polynomial equations for the solar cell characteristics versus temperature, and the fourth program uses the polynomial coefficients generated by the polynomial curve fit program to generate the parametric data.

  12. Genetic Diversity of O-Antigens in Hafnia alvei and the Development of a Suspension Array for Serotype Detection

    PubMed Central

    Duan, Zhifeng; Niedziela, Tomasz; Lugowski, Czeslaw; Cao, Boyang; Wang, Tianwei; Xu, Lingling; Yang, Baopeng; Liu, Bin; Wang, Lei

    2016-01-01

    Hafnia alvei is a facultative and rod-shaped gram-negative bacterium that belongs to the Enterobacteriaceae family. Although it has been more than 50 years since the genus was identified, very little is known about variations among Hafnia species. Diversity in O-antigens (O-polysaccharide, OPS) is thought to be a major factor in bacterial adaptation to different hosts and situations and variability in the environment. Antigenic variation is also an important factor in pathogenicity that has been used to define clones within a number of species. The genes that are required to synthesize OPS are always clustered within the bacterial chromosome. A serotyping scheme including 39 O-serotypes has been proposed for H. alvei, but it has not been correlated with known OPS structures, and no previous report has described the genetic features of OPS. In this study, we obtained the genome sequences of 21 H. alvei strains (as defined by previous immunochemical studies) with different lipopolysaccharides. This is the first study to show that the O-antigen gene cluster in H. alvei is located between mpo and gnd in the chromosome. All 21 of the OPS gene clusters contain both the wzx gene and the wzy gene and display a large number of polymorphisms. We developed an O serotype-specific wzy-based suspension array to detect all 21 of the distinct OPS forms we identified in H. alvei. To the best of our knowledge, this is the first report to identify the genetic features of H. alvei antigenic variation and to develop a molecular technique to identify and classify different serotypes. PMID:27171009

  13. Genetic Diversity of O-Antigens in Hafnia alvei and the Development of a Suspension Array for Serotype Detection.

    PubMed

    Duan, Zhifeng; Niedziela, Tomasz; Lugowski, Czeslaw; Cao, Boyang; Wang, Tianwei; Xu, Lingling; Yang, Baopeng; Liu, Bin; Wang, Lei

    2016-01-01

    Hafnia alvei is a facultative and rod-shaped gram-negative bacterium that belongs to the Enterobacteriaceae family. Although it has been more than 50 years since the genus was identified, very little is known about variations among Hafnia species. Diversity in O-antigens (O-polysaccharide, OPS) is thought to be a major factor in bacterial adaptation to different hosts and situations and variability in the environment. Antigenic variation is also an important factor in pathogenicity that has been used to define clones within a number of species. The genes that are required to synthesize OPS are always clustered within the bacterial chromosome. A serotyping scheme including 39 O-serotypes has been proposed for H. alvei, but it has not been correlated with known OPS structures, and no previous report has described the genetic features of OPS. In this study, we obtained the genome sequences of 21 H. alvei strains (as defined by previous immunochemical studies) with different lipopolysaccharides. This is the first study to show that the O-antigen gene cluster in H. alvei is located between mpo and gnd in the chromosome. All 21 of the OPS gene clusters contain both the wzx gene and the wzy gene and display a large number of polymorphisms. We developed an O serotype-specific wzy-based suspension array to detect all 21 of the distinct OPS forms we identified in H. alvei. To the best of our knowledge, this is the first report to identify the genetic features of H. alvei antigenic variation and to develop a molecular technique to identify and classify different serotypes. PMID:27171009

  14. Development of a suspension array assay in multiplex for simultaneous measurement of serum levels of four eosinophil granule proteins

    PubMed Central

    Makiya, Michelle A.; Herrick, Jesica A.; Khoury, Paneez; Prussin, Calman P.; Nutman, Thomas B.; Klion, Amy D.

    2014-01-01

    The concentrations of major basic protein (MBP), eosinophil cationic protein (ECP), eosinophil derived neurotoxin (EDN) and eosinophil peroxidase (EPO) have been associated with eosinophilic disease severity. Whereas a variety of techniques have been used to measure individual eosinophil granule protein concentration, none of these methods efficiently measures MBP, ECP, EDN and EPO simultaneously. A multiplex suspension array system was developed to simultaneously measure the concentration of MBP, ECP, EDN and EPO in serum. The assay showed excellent inter- and intra-assay reliability, and serum levels of MBP, ECP and EDN from eosinophilic subjects analyzed by ELISA and multiplex were highly correlated (r = 0.8579; P < 0.0001, r = 0.6356; P = 0.0006 and r = 0.8600; P < 0.0001, respectively, Spearman rank correlation). Moreover, the multiplex assay required 500-fold less serum than a single ELISA to achieve comparable sensitivity. Absolute eosinophil count and eosinophil surface expression of the activation marker, CD69, were significantly correlated with concentrations of MBP, EDN and EPO, but not ECP, in serum from eosinophilic subjects. Furthermore, subjects with eosinophilic gastrointestinal disorder and normal peripheral absolute eosinophil counts (< 0.5 × 109/L) had significantly increased concentrations of MBP (P < 0.0001), ECP (P < 0.0001), EDN (P = 0.0001) and EPO (P < 0.0001) compared to normal donors. In summary, the eosinophil granule protein multiplex assay provides a rapid and reliable way to measure eosinophil granule protein levels and should prove useful in assessing patterns of degranulation in patients with eosinophilic disorders. PMID:24914990

  15. No Evidence for Xenotropic Murine Leukemia-Related Virus Infection in Sweden Using Internally Controlled Multiepitope Suspension Array Serology

    PubMed Central

    Blomberg, Fredrik; Sjösten, Anna; Sheikholvaezin, Ali; Bölin-Wiener, Agnes; Elfaitouri, Amal; Hessel, Sanna; Gottfries, Carl-Gerhard; Zachrisson, Olof; Öhrmalm, Christina; Jobs, Magnus; Pipkorn, Rüdiger

    2012-01-01

    Many syndromes have a large number of differential diagnoses, a situation which calls for multiplex diagnostic systems. Myalgic encephalomyelitis (ME), also named chronic fatigue syndrome (CFS), is a common disease of unknown etiology. A mouse retrovirus, xenotropic murine leukemia-related virus (XMRV), was found in ME/CFS patients and blood donors, but this was not corroborated. However, the paucity of serological investigations on XMRV in humans prompted us to develop a serological assay which cover many aspects of XMRV antigenicity. It is a novel suspension array method, using a multiplex IgG assay with nine recombinant proteins from the env and gag genes of XMRV and 38 peptides based on known epitopes of vertebrate gammaretroviruses. IgG antibodies were sought in 520 blood donors and 85 ME/CFS patients and in positive- and negative-control sera from animals. We found no differences in seroreactivity between blood donors and ME/CFS patients for any of the antigens. This did not support an association between ME/CFS and XMRV infection. The multiplex serological system had several advantages: (i) biotinylated protein G allowed us to run both human and animal sera, which is essential because of a lack of XMRV-positive humans; (ii) a novel quality control was a pan-peptide positive-control rabbit serum; and (iii) synthetic XMRV Gag peptides with degenerate positions covering most of the variation of murine leukemia-like viruses did not give higher background than nondegenerate analogs. The principle may be used for creation of variant tolerant peptide serologies. Thus, our system allows rational large-scale serological assays with built-in quality control. PMID:22787191

  16. Polystyrene Core-Silica Shell Particles with Defined Nanoarchitectures as a Versatile Platform for Suspension Array Technology.

    PubMed

    Sarma, Dominik; Gawlitza, Kornelia; Rurack, Knut

    2016-04-19

    The need for rapid and high-throughput screening in analytical laboratories has led to significant growth in interest in suspension array technologies (SATs), especially with regard to cytometric assays targeting a low to medium number of analytes. Such SAT or bead-based assays rely on spherical objects that constitute the analytical platform. Usually, functionalized polymer or silica (SiO2) microbeads are used which each have distinct advantages and drawbacks. In this paper, we present a straightforward synthetic route to highly monodisperse SiO2-coated polystyrene core-shell (CS) beads for SAT with controllable architectures from smooth to raspberry- and multilayer-like shells by varying the molecular weight of poly(vinylpyrrolidone) (PVP), which was used as the stabilizer of the cores. The combination of both organic polymer core and a structurally controlled inorganic SiO2 shell in one hybrid particle holds great promises for flexible next-generation design of the spherical platform. The particles were characterized by electron microscopy (SEM, T-SEM, and TEM), thermogravimetry, flow cytometry, and nitrogen adsorption/desorption, offering comprehensive information on the composition, size, structure, and surface area. All particles show ideal cytometric detection patterns and facile handling due to the hybrid structure. The beads are endowed with straightforward modification possibilities through the defined SiO2 shells. We successfully implemented the particles in fluorometric SAT model assays, illustrating the benefits of tailored surface area which is readily available for small-molecule anchoring. Very promising assay performance was shown for DNA hybridization assays with quantification limits down to 8 fmol. PMID:27018430

  17. Metabolomics driven analysis of Erythrina lysistemon cell suspension culture in response to methyl jasmonate elicitation.

    PubMed

    Farag, Mohamed A; Mekky, Hattem; El-Masry, Sawsan

    2016-09-01

    An MS-based metabolomic approach was used to profile the secondary metabolite of the ornamental plant Erythrina lysistemon via ultra-performance liquid chromatography coupled to photodiode array detection and high resolution q-TOF mass spectrometry (UPLC-PDA-MS). Cultures maintained the capacity to produce E. lysistemon flavonoid subclasses with pterocarpans amounting for the most abundant ones suggesting that it could provide a resource of such flavonoid subclass. In contrast, alkaloids, major constituents of Erythrina genus, were detected at trace levels in suspension cultures. Methyl jasmonate (MeJA), phytohormone, was further supplied to culture with the aim of increasing secondary metabolites production and with metabolite profiles subjected to multivariate data analysis to evaluate its effect. Results revealed that triterpene i.e. oleanolic acid and fatty acid i.e. hydroxy-octadecadienoic acid were elicited in response to methyl jasmonate, whereas pterocarpans i.e., isoneorautenol showed a decline in response to elicitation suggesting for the induction of terpenoid biosynthetic pathway and concurrent with a down regulation of pterocarpans. In conclusion, a total of 53 secondary metabolites including 3 flavones, 12 isoflavones, 4 isoflavanones, 4 alkaloids, 11 pterocarpans, and 5 phenolic acids were identified. PMID:27504198

  18. Bio-Rad’s Bio-Plex® suspension array system, xMAP technology overview

    PubMed Central

    Houser, Brett

    2012-01-01

    The Bio-Plex® system utilizes xMAP technology to permit the multiplexing of up to 100 different analytes. Multiplex analysis gives researchers the ability to look at analytes simultaneously providing more information from less sample volume in less time than traditional immunoassay methods. Similar to ELISA, xMAP utilizes an antibody sandwich for detection but differs from ELISA in capture substrate and detection method. Rather than a flat surface, Bio-Plex®assays make use of differentially detectable bead sets as a substrate capturing analytes in solution and employs fluorescent methods for detection. These bead sets identify the analytes and detection antibodies are used to measure the quantity of analyte. The use of differentially detectable beads enables the simultaneous identification and quantification of many analytes in the same sample. PMID:22852821

  19. Computational Methods for the Analysis of Array Comparative Genomic Hybridization

    PubMed Central

    Chari, Raj; Lockwood, William W.; Lam, Wan L.

    2006-01-01

    Array comparative genomic hybridization (array CGH) is a technique for assaying the copy number status of cancer genomes. The widespread use of this technology has lead to a rapid accumulation of high throughput data, which in turn has prompted the development of computational strategies for the analysis of array CGH data. Here we explain the principles behind array image processing, data visualization and genomic profile analysis, review currently available software packages, and raise considerations for future software development. PMID:17992253

  20. Proteomic analysis of differentially expressed proteins induced by salicylic acid in suspension-cultured ginseng cells

    PubMed Central

    Sun, Jiaman; Fu, Junfan; Zhou, Rujun

    2013-01-01

    In this study, optimized 2-DE sample preparation methodologies were established for suspension-cultured ginseng cells. Three commonly used protein extraction methods (Trichloroacetic acid-acetone, urea/thiourea and phenol extraction method) were evaluated for proteomic analysis of suspension cultures of ginseng. A comparative analysis of suspension-cultured ginseng cells proteome induced by salicylic acid (SA) was reported. The results demonstrated that phenol extraction method was the best method based on protein extraction efficiency and the good quality of 2-DE patterns for suspension-cultured ginseng cells. Fifteen differentially expressed proteins induced by salicylic acid in suspension-cultured ginseng cells were identified by MALDI-TOF-MS. These identified proteins were involved in defense and stress response, energy metabolism, signal transduction/transcription, protein synthesis and metabolism, and photosynthesis. Chaperonin 60, related to defense responses, was more abundant in suspension-cultured ginseng cells after application of SA. Vacuolar ATPase subunit B was newly induced in SA treatment. PMID:24600313

  1. Wavelet Analysis for Acoustic Phased Array

    NASA Astrophysics Data System (ADS)

    Kozlov, Inna; Zlotnick, Zvi

    2003-03-01

    Wavelet spectrum analysis is known to be one of the most powerful tools for exploring quasistationary signals. In this paper we use wavelet technique to develop a new Direction Finding (DF) Algorithm for the Acoustic Phased Array (APA) systems. Utilising multi-scale analysis of libraries of wavelets allows us to work with frequency bands instead of individual frequency of an acoustic source. These frequency bands could be regarded as features extracted from quasistationary signals emitted by a noisy object. For detection, tracing and identification of a sound source in a noisy environment we develop smart algorithm. The essential part of this algorithm is a special interacting procedure of the above-mentioned DF-algorithm and the wavelet-based Identification (ID) algorithm developed in [4]. Significant improvement of the basic properties of a receiving APA pattern is achieved.

  2. Solar Array Verification Analysis Tool (SAVANT) Developed

    NASA Technical Reports Server (NTRS)

    Bailey, Sheila G.; Long, KIenwyn J.; Curtis, Henry B.; Gardner, Barbara; Davis, Victoria; Messenger, Scott; Walters, Robert

    1999-01-01

    Modeling solar cell performance for a specific radiation environment to obtain the end-of-life photovoltaic array performance has become both increasingly important and, with the rapid advent of new types of cell technology, more difficult. For large constellations of satellites, a few percent difference in the lifetime prediction can have an enormous economic impact. The tool described here automates the assessment of solar array on-orbit end-of-life performance and assists in the development and design of ground test protocols for different solar cell designs. Once established, these protocols can be used to calculate on-orbit end-of-life performance from ground test results. The Solar Array Verification Analysis Tool (SAVANT) utilizes the radiation environment from the Environment Work Bench (EWB) model developed by the NASA Lewis Research Center s Photovoltaic and Space Environmental Effects Branch in conjunction with Maxwell Technologies. It then modifies and combines this information with the displacement damage model proposed by Summers et al. (ref. 1) of the Naval Research Laboratory to determine solar cell performance during the course of a given mission. The resulting predictions can then be compared with flight data. The Environment WorkBench (ref. 2) uses the NASA AE8 (electron) and AP8 (proton) models of the radiation belts to calculate the trapped radiation flux. These fluxes are integrated over the defined spacecraft orbit for the duration of the mission to obtain the total omnidirectional fluence spectra. Components such as the solar cell coverglass, adhesive, and antireflective coatings can slow and attenuate the particle fluence reaching the solar cell. In SAVANT, a continuous slowing down approximation is used to model this effect.

  3. A comparative analysis of passive twin tube and skyhook MRF dampers for motorcycle front suspensions

    NASA Astrophysics Data System (ADS)

    Ahmadian, Mehdi; Gravatt, John

    2004-07-01

    A comparative analysis between conventional passive twin tube dampers and skyhook-controlled magneto-rheological fluid (MRF) dampers for motorcycle front suspensions is provided, based on single axis testing in a damper test rig and suspension performance testing in road trials. Performance motorcycles, while boasting extremely light suspension components and competition-ready performance, have an inherent weakness in comfort, as the suspension systems are designed primarily for racing purposes. Front suspension acceleration and shock loading transmit directly through the front suspension triple clamp into the rider's arms and shoulders, causing rapid fatigue in shoulder muscles. Magneto-rheological fluid dampers and skyhook control systems offer an alternative to conventional sport motorcycle suspensions - both performance and comfort can be combined in the same package. Prototype MRF dampers designed and manufactured specifically for this application require no more space than conventional twin tube designs while adding only 1.7 pounds total weight to the system. The MRF dampers were designed for high controllability and low power consumption, two vital considerations for a motorcycle application. The tests conducted include the dampers' force-velocity curve testing in a damper test rig and suspension performance based on damper position, velocity, and acceleration measurement. Damper test rig results show the MRF dampers have a far greater range of adjustability than the test vehicle's OEM dampers. Combined with a modified sky-hook control system, the MRF dampers can greatly decrease the acceleration and shock loading transmitted to the rider through the handlebars while contributing performance in manners such as anti-dive under braking. Triple clamp acceleration measurements from a variety of staged road conditions, such as sinusoidal wave inputs, will be compared to subjective test-rider field reports to establish a correlation between rider fatigue and the

  4. Approximate Analysis of Semiconductor Laser Arrays

    NASA Technical Reports Server (NTRS)

    Marshall, William K.; Katz, Joseph

    1987-01-01

    Simplified equation yields useful information on gains and output patterns. Theoretical method based on approximate waveguide equation enables prediction of lateral modes of gain-guided planar array of parallel semiconductor lasers. Equation for entire array solved directly using piecewise approximation of index of refraction by simple functions without customary approximation based on coupled waveguid modes of individual lasers. Improved results yield better understanding of laser-array modes and help in development of well-behaved high-power semiconductor laser arrays.

  5. Digital controller design: Analysis of the annular suspension pointing system

    NASA Technical Reports Server (NTRS)

    Kuo, B. C.

    1979-01-01

    The Annular Suspension and Pointing System (ASPS) is a payload auxiliary pointing device of the Space Shuttle. The ASPS is comprised of two major subassemblies, a vernier and a coarse pointing subsystem. The experiment is attached to a mounting plate/rim combination which is suspended on magnetic bearing/actuators (MBA) strategically located about the rim. Fine pointing is achieved by gimballing the plate/rim within the MBA gaps. Control about the experiment line-of-sight is obtained through the use of a non-contacting rim drive and positioning torquer. All sensors used to close the servo loops on the vernier system are noncontacting elements. Therefore, the experiment is a free-flyer constrained only by the magnetic forces generated by the control loops.

  6. Array Analysis of North Atlantic Microseisms

    NASA Astrophysics Data System (ADS)

    Craig, David; Bean, Chris; Möllhoff, Martin; Donne, Sarah; Lokmer, Ivan; Le Pape, Florian

    2016-04-01

    Oceans generate persistent low frequency background seismic signals known as microseisms through a mechanical coupling with the Earth's crust. Microseism energy originates as regions of low barometric pressure (depressions) over the oceans where it is transmitted to the sea-floor and propagates as elastic energy in the Earths crust. Consequently microseisms carry important meteorological information relating to both the atmosphere and the hydrosphere. The significance of microseisms as climate indicators has previously been investigated in several studies (Essen et al., 1999; Aster et al., 2010) and to estimate ocean wave parameters using onshore seismometer data (Bromirski et al., 1999). Also many modern seismological methods make use of microseism signals, for example "noise tomography" (Shapiro et al., 2005); spectral ratio techniques ; and cross-correlation techniques (Wapenaar et al., 2011; Brenguier et al., 2014). The continental shelf near Ireland is a known generation are for microseisms and an important region for European weather forecasting and climate studies. There has also been seismometers in the region since the 1960s. There is a single station in Valentia observatory in south-west Ireland and a small scale seismic array in Scotland which offer potential climate records for the region. To make use of this information it is first necessary to understand how microseisms recorded in Ireland relate to the local ocean wavefield. The WAVEOBS project was set established with three primary goals; to get a better fundamental understanding of microseism sources; to investigate the use of ocean generated microseisms as real time ocean wave height data; and to investigate their use as a climate proxy. Using spectral analysis and array methods the microseism wavefield in the North-East Atlantic near Ireland is described with reference to the ocean wavefield.

  7. Theoretical and FEM analysis of suspension and propulsion system with HTS hybrid electromagnets in an EMS Maglev model

    NASA Astrophysics Data System (ADS)

    Chung, Y. D.; Lee, C. Y.; Jang, J. Y.; Yoon, Y. S.; Ko, T. K.

    2011-11-01

    We have been constructed a proto-type electromagnetic suspension (EMS) based maglev vehicle system. The maglev concept utilizes magnetic forces for noncontact suspension, guidance and propulsion. The suspension system with high temperature superconducting (HTS) hybrid electromagnet (EM) is composed of HTS coils and normal coils, which consume little power to keep large suspension gap. The magnetic forces realize to guide the vehicle, propel the vehicle along the guide-way and assist in braking action. The proto-type EMS-based Maglev model is designed to keep the suspension gap of 20 mm. This paper presents the theoretical analysis of the maglev vehicle based on the EMS model to obtain the designing parameters for levitation and propulsion forces. The magnetic field distributions of the electromagnetic forces with hybrid EM and propulsion stator coils are analyzed based on three dimension (3D) finite element method (FEM) analysis. From the simulation results, appropriately design parameters of the suspension, guidance and propulsion were obtained.

  8. Roll and pitch independently tuned interconnected suspension: modelling and dynamic analysis

    NASA Astrophysics Data System (ADS)

    Xu, Guangzhong; Zhang, Nong; Roser, Holger M.

    2015-12-01

    In this paper, a roll and pitch independently tuned hydraulically interconnected passive suspension is presented. Due to decoupling of vibration modes and the improved lateral and longitudinal stability, the stiffness of individual suspension spring can be reduced for improving ride comfort and road grip. A generalised 14 degree-of-freedom nonlinear vehicle model with anti-roll bars is established to investigate the vehicle ride and handling dynamic responses. The nonlinear fluidic model of the hydraulically interconnected suspension is developed and integrated with the full vehicle model to investigate the anti-roll and anti-pitch characteristics. Time domain analysis of the vehicle model with the proposed suspension is conducted under different road excitations and steering/braking manoeuvres. The dynamic responses are compared with conventional suspensions to demonstrate the potential of enhanced ride and handling performance. The results illustrate the model-decoupling property of the hydraulically interconnected system. The anti-roll and anti-pitch performance could be tuned independently by the interconnected systems. With the improved anti-roll and anti-pitch characteristics, the bounce stiffness and ride damping can be optimised for better ride comfort and tyre grip.

  9. Use of a Suspension Array for Rapid Identification of the Varieties and Genotypes of the Cryptococcus neoformans Species Complex

    PubMed Central

    Diaz, Mara R.; Fell, Jack W.

    2005-01-01

    Cryptococcus neoformans is an encapsulated fungal pathogen known to cause severe disease in immunocompromised patients. The disease, cryptococcosis, is mostly acquired by inhalation and can result in a chronic meningoencephalitis, which can be fatal. Here, we describe a molecular method to identify the varieties and genotypic groups within the C. neoformans species complex from culture-based assays. The method employs a novel flow cytometer with a dual laser system that allows the simultaneous detection of different target sequences in a multiplex and high-throughput format. The assay uses a liquid suspension hybridization format with specific oligonucleotide probes that are covalently bound to the surface of fluorescent color-coded microspheres. Biotinylated target amplicons, which hybridized to their complementary probe sequences, are quantified by the addition of the conjugate, streptavidin R-phycoerythrin. In this study we developed and validated eight probes derived from sequence analysis of the intergenic spacer region of the rRNA gene region. The assay proved to be specific and sensitive, allowed discrimination of a 1-bp mismatch with no apparent cross-reactivity, and detected 101 to 103 genome copies. The described protocol, which can be used directly with yeast cells or isolated DNA, can be undertaken in less than 1 h following PCR amplification and permits identification of species in a multiplex format. In addition to a multiplex capability, the assay allows the simultaneous detection of target sequences in a single reaction. The accuracy, speed, flexibility, and sensitivity of this technology are a few of the advantages that will make this assay useful for the diagnosis of human cryptococcal infections and other pathogenic diseases. PMID:16081894

  10. Rapid O serogroup identification of the ten most clinically relevant STECs by Luminex microbead-based suspension array

    Technology Transfer Automated Retrieval System (TEKTRAN)

    Identification and serotyping of Shiga toxin-producing Escherichia coli during foodborne outbreaks can aid in matching clinical, food, and environmental isolates when trying to identify the sources of illness and ultimately food contamination. Herein we describe a Luminex microbead-based suspension ...

  11. Spacecraft Multiple Array Communication System Performance Analysis

    NASA Technical Reports Server (NTRS)

    Hwu, Shian U.; Desilva, Kanishka; Sham, Catherine C.

    2010-01-01

    The Communication Systems Simulation Laboratory (CSSL) at the NASA Johnson Space Center is tasked to perform spacecraft and ground network communication system simulations, design validation, and performance verification. The CSSL has developed simulation tools that model spacecraft communication systems and the space and ground environment in which the tools operate. In this paper, a spacecraft communication system with multiple arrays is simulated. Multiple array combined technique is used to increase the radio frequency coverage and data rate performance. The technique is to achieve phase coherence among the phased arrays to combine the signals at the targeting receiver constructively. There are many technical challenges in spacecraft integration with a high transmit power communication system. The array combining technique can improve the communication system data rate and coverage performances without increasing the system transmit power requirements. Example simulation results indicate significant performance improvement can be achieved with phase coherence implementation.

  12. Rapid Screening of Complex Chemical Samples via Capillary Array Analysis

    SciTech Connect

    D. S. Anex; D. W. Neyer

    1998-11-01

    This report is a summary of the results of a two-year Laboratory-Directed Research and Development (LDRD) project that developed instrumentation and methods for capillary array analysis. During the course of this project, a new capillary array electrochromatography instrument was developed to perform eight simultaneous separations and provide complementary chromatographic information from each column on a single sample.

  13. Enzyme array-amperometric detection in carbohydrate analysis

    SciTech Connect

    Sun, M.; Lee, C.S.

    1998-03-05

    The introduction of an enzyme array-electrochemical detection method for carbohydrate analysis is demonstrated by using two complex and one high mannose N-linked oligosaccharides. Instead of measuring the remaining uncleaved oligosaccharides in enzymatic digestion, released monosaccharides are directly quantified by pulsed amperometric detection at a gold electrode. The measured monosaccharide concentrations in combination with the enzyme array analysis provide structural characterization of oligosaccharides. The enzyme array-electrochemical detection method does not require any separation procedure or any prior labeling of oligosaccharides. However, this method is limited by the use of purified oligosaccharide samples and the nature of the enzyme array. The development of more sophisticated enzyme arrays relies upon the introduction of a bank of highly specific (bond, arm, aglycon) exoglycosidases.

  14. Utility of array comparative genomic hybridization in cytogenetic analysis.

    PubMed

    Singh, Rashmi R; Cheung, K-John J; Horsman, Douglas E

    2011-01-01

    Conventional comparative genomic hybridization (CGH), high-resolution oligonucleotide, and BAC array CGH have modernized the field of cytogenetics to enable access to unbalanced genomic aberrations such as whole or partial chromosomal gains and losses. The basic principle of array CGH involves hybridizing differentially labeled proband/test (e.g., tumor) and normal reference DNA on an array of oligonucleotide or BAC clones instead of normal metaphases as in conventional CGH. The sub-megabase resolution tiling BAC arrays are extremely useful for the analysis of acquired aberrations in cancer genomes. Array CGH can be extremely useful to identify the chromosomal makeup of marker and ring chromosomes, to define/delineate the precise location/bands involved in structural aberrations and the accurate localization of translocation breakpoints in both simple and complex karyotypes either alone or in combination with standard karyotype analysis. PMID:21431645

  15. Analysis of capacitive coupling within microelectrode array.

    PubMed

    Hu, Z; Troyk, P R; Detlefsen, D E

    2006-01-01

    Capacitive coupling within high-density microelectrode arrays can degrade neural recording signal or disperse neural stimulation current. Material deterioration in a chronically implanted neural stimulation/recording system can cause such an undesired effect. We present a simple method with an iterative algorithm to quantify the cross-coupling capacitance, in-situ. PMID:17947024

  16. Simultaneous detection of ochratoxin A and fumonisin B1 in cereal samples using an aptamer-photonic crystal encoded suspension array.

    PubMed

    Yue, Sun; Jie, Xu; Wei, Li; Bin, Cao; Dou Dou, Wang; Yi, Yang; QingXia, Lin; JianLin, Li; TieSong, Zheng

    2014-12-01

    A simple, new aptamer-photonic crystal encoded suspension array was designed to simultaneously quantify and qualify ochratoxin A(OTA) and fumonisin B1(FB1) in cereal samples. The aptamers of OTA and FB1 were immobilized on the surfaces of photonic crystals by chemical bonding. When the target mycotoxins appear in a sample, the fluorescence-labeled complementary DNA of the aptamer dissociates from their double DNA hybrid and results in an obvious decrease in fluorescence intensity of the microsphere. The difference value of fluorescent intensities for each kind of silica photonic crystal microsphere (SPCM) quantitatively conveys the concentration of mycotoxin, and the structure colors or reflectance peak positions of the SPCMs confirm the kind of mycotoxin detected. The reaction conditions including the immobilization method for aptamers, hybridization, and incubation conditions have been optimized. This developed method displayed a wide linear detection range (0.01-1 ng/mL for OTA and 0.001-1 ng/mL for FB1) and a low limit of detection (0.25 pg/mL for OTA and 0.16 pg/mL for FB1). The recovery rates in the spiked cereal samples ranged from 81.80% to 116.38% for OTA and 76.58%-114.79% for FB1. The positive detection results in the naturally contaminated cereal samples were in agreement with those of classic enzyme-linked immunosorbent assay (ELISA). This simple suspension array scheme displays a great application potential for the high throughput screen assay of mycotoxins. PMID:25405701

  17. Non-dimensionalised closed-form parametric analysis of semi-active vehicle suspensions using a quarter-car model

    NASA Astrophysics Data System (ADS)

    Ahmadian, Mehdi; Blanchard, Emmanuel

    2011-02-01

    This article provides a non-dimensionalised closed-form analysis of semi-active vehicle suspensions, using a quarter-car model. The derivation of the closed-form solutions for three indices that can be used for ride comfort, vehicle handling, and stability are presented based on non-dimensionalised suspension parameters. The behaviour of semi-active vehicle suspensions is evaluated using skyhook, groundhook, and hybrid control policies, and compared with passive suspensions. The relationship between vibration isolation, suspension deflection, and road holding is studied, using three performance indices based on the mean square of the sprung mass acceleration, rattle space, and tyre deflection, respectively. The results of the study indicate that the hybrid control policy yields significantly better comfort than a passive suspension, without reducing the road-holding quality or increasing the suspension displacement for typical passenger cars. The results also indicate that for typical passenger cars, the hybrid control policy results in a better compromise between comfort, road holding and suspension travel requirements than both the skyhook and groundhook control methods.

  18. Economic analysis of the unified heliostat array

    NASA Astrophysics Data System (ADS)

    1980-11-01

    The array (UHA) is comprised of conventional two-axis heliostats mounted on a terraced south-facing wall of a single structure. The arrangement of heliostats on the array is chosen to eliminate or control the degree of inter-heliostat shading and blocking. The UHA was investigated as to cost and optical performance. Two heliostats, the Veda Industrial Heliostat (VIH) and the Repowering Helistat were investigated in conjunction with the UHA. The UHA is found to be a viable candidate for solar thermal central receiver applications. The UHA-VIH combination was shown to provide very high flux densities and to be suitable for high temperature applications in the 1000 K to 2000 K range. These temperatures were shown to be achieve even with very small (1 MWt) collector fields.

  19. Qualitative analysis of controlled release ciprofloxacin/carbopol 934 mucoadhesive suspension

    PubMed Central

    Sahoo, Subhashree; Chakraborti, Chandra Kanti; Mishra, Subash Chandra

    2011-01-01

    Mucoadhesive polymeric (carbopol 934) suspension of ciprofloxacin was prepared by ultrasonication and optimized with the aim of developing an oral controlled release gastro-retentive dosage form. The qualitative analysis of the formulation was performed by fourier transform infrared spectroscopy (FTIR), Raman spectroscopy, X-ray powder diffraction (XRD), and scanning electron microscopy (SEM) analyses. FTIR (400 cm-1 to 4000 cm-1 region) and Raman (140 to 2400 cm-1 region) Spectroscopic studies were carried out and the spectra were used for interpretation. XRD data of pure drug, polymer and the formulation were obtained using a powder diffractometer scanned from a Bragg's angle (2θ) of 10° to 70°. The dispersion of the particle was observed using SEM techniques. The particle size distribution and aspect ratio of particles in the polymeric suspension were obtained from SEM image analysis. The results from FTIR and Raman spectroscopic analyses suggested that, in formulation, the carboxylic groups of ciprofloxacin and hydroxyl groups of C934 undergo a chemical interaction leading to esterification and hydrogen bonding. The XRD data suggested that the retention of crystalline nature of ciprofloxacin in the formulation would lead to increase in stability and drug loading; decrease in solubility; and delay in release of the drug from polymeric suspension with better bioavailability and penetration capacity. The SEM image analysis indicated that, in the formulation maximum particles were having aspect ratio from 2 to 4 and standard deviation was very less which provided supporting evidences for homogeneous, uniformly dispersed, stable controlled release ciprofloxacin suspension which would be pharmaceutically acceptable. PMID:22171318

  20. Design and analysis of slotted waveguide antenna arrays

    NASA Astrophysics Data System (ADS)

    Richardson, Phillip N.; Yee, Hung Yuet

    1988-06-01

    The typical design of a waveguide slot array begins with an examination of the requirements connected with the definition of the size of the array, the types of slots, and feed methods; this is followed by analysis to determine the dimensions and positions of each slot, and a prediction of array performance; the final step is fabrication and test of a breadboard model to validate the analytical design. These design and analysis aspects are considered in connection with the types of waveguide slots, slot-array architecture, equivalent circuit models, pattern calculations, and analysis techniques. Attention is also given to the use of available design data, experimental techniques, tests using subarrays, experimental measurements of radiating slots, and near-field and far-field measurements.

  1. Geometric analysis and restitution of digital multispectral scanner data arrays

    NASA Technical Reports Server (NTRS)

    Baker, J. R.; Mikhail, E. M.

    1975-01-01

    An investigation was conducted to define causes of geometric defects within digital multispectral scanner (MSS) data arrays, to analyze the resulting geometric errors, and to investigate restitution methods to correct or reduce these errors. Geometric transformation relationships for scanned data, from which collinearity equations may be derived, served as the basis of parametric methods of analysis and restitution of MSS digital data arrays. The linearization of these collinearity equations is presented. Algorithms considered for use in analysis and restitution included the MSS collinearity equations, piecewise polynomials based on linearized collinearity equations, and nonparametric algorithms. A proposed system for geometric analysis and restitution of MSS digital data arrays was used to evaluate these algorithms, utilizing actual MSS data arrays. It was shown that collinearity equations and nonparametric algorithms both yield acceptable results, but nonparametric algorithms possess definite advantages in computational efficiency. Piecewise polynomials were found to yield inferior results.

  2. Gas sensor arrays for olfactory analysis: Issues and opportunities

    SciTech Connect

    Hoffheins, B.S.; Lauf, R.J.

    1988-01-01

    There have been many approaches to the development of gas sensor arrays for use in gas detection instruments and devices. Various techniques have been proposed to handle the signal processing and pattern recognition required to convert the outputs of these arrays into useful information such as the identities and concentrations of particular chemical species. In general, the pattern recognition techniques have not been developed as fully as have the sensor arrays. Materials issues, like sensor aging and drift, power requirements, and packaging are also problems that must be solved before gas sensor arrays can be incorporated into instruments for industrial and consumer markets. This paper describes significant thrusts in the areas of metal-oxide gas sensor array design and construction, related signature analysis and deconvolution, and materials issues. Recommendations are offered for future developments.

  3. Modeling and analysis of electrorheological suspensions in shear flow

    NASA Astrophysics Data System (ADS)

    Seo, Youngwook P.; Chua, Wei Huan; Seo, Yongsok

    2015-05-01

    A new rheological model was applied to the analysis of the electrorheological behavior of a fluid containing silica nanoparticle-decorated polyaniline nanofibers. A model's predictions were compared with the experimental data, revealing that the proposed model correctly predicted the shear stress behavior both quantitatively and qualitatively. The shear stress data of the electrorheological fluid showing aligned fibers' structural reformation as a function of the shear rate agreed well with the new model which required fewer parameters than the CCJ (Cho-Choi-Jhon) model. The static yield stress was found to be quadratically dependent on the field strength, in agreement with the predictions of the polarization model. A scaling function was used to model the yield stress behavior of the electrorheological fluid over a range of electric fields, and it correctly predicted the static yield stress behavior both quantitatively and qualitatively.

  4. Performance analysis of a semi-active railway vehicle suspension featuring MR dampers

    NASA Astrophysics Data System (ADS)

    Kim, Hwan-Choong; Choi, Seung-Bok; Lee, Gyu-Seop; An, Chae-Hun; You, Won-Hee

    2014-03-01

    This paper presents performance analysis of semi-active railway vehicle suspension system using MR damper. In order to achieve this goal, a mathematical dynamic model of railway vehicle is derived by integrating car body, bogie frame and wheel-set which can be able to represent lateral, yaw and roll motion. Based on this model, the dynamic range of MR damper at the railway secondary suspension system and design parameters of MR damper are calculated. Subsequently, control performances of railway vehicle including car body lateral motion and acceleration of MR damper are evaluated through computer simulations. Then, the MR damper is manufactured to be retrofitted with the real railway vehicle and its characteristics are experimentally measured. Experimental performance of MR damper is assessed using test rig which is composed of a car body and two bogies.

  5. Suspension trapping (STrap) sample preparation method for bottom-up proteomics analysis.

    PubMed

    Zougman, Alexandre; Selby, Peter J; Banks, Rosamonde E

    2014-05-01

    Despite recent developments in bottom-up proteomics, the need still exists in a fast, uncomplicated, and robust method for comprehensive sample processing especially when applied to low protein amounts. The suspension trapping method combines the advantage of efficient SDS-based protein extraction with rapid detergent removal, reactor-type protein digestion, and peptide cleanup. Proteins are solubilized in SDS. The sample is acidified and introduced into the suspension trapping tip incorporating the depth filter and hydrophobic compartments, filled with the neutral pH methanolic solution. The instantly formed fine protein suspension is trapped in the depth filter stack-this crucial step is aimed at separating the particulate matter in space. SDS and other contaminants are removed in the flow-through, and a protease is introduced. Following the digestion, the peptides are cleaned up using the tip's hydrophobic part. The methodology allows processing of protein loads down to the low microgram/submicrogram levels. The detergent removal takes about 5 min, whereas the tryptic proteolysis of a cellular lysate is complete in as little as 30 min. We have successfully utilized the method for analysis of cellular lysates, enriched membrane preparations, and immunoprecipitates. We expect that due to its robustness and simplicity, the method will become an essential proteomics tool. PMID:24678027

  6. Rapid Analysis, Self-Calibrating Array for Air Monitoring

    NASA Technical Reports Server (NTRS)

    Homer, Margie L.; Shevade, Abhijit V.; Lara, Liana; Huerta, Ramon; Vergara, Alexander; Muezzinoglua, Mehmet K.

    2012-01-01

    Human space missions have critical needs for monitoring and control for life support systems. These systems have monitoring needs that include feedback for closed loop processes and quality control for environmental factors. Sensors and monitoring technologies assure that the air environment and water supply for the astronaut crew habitat fall within acceptable limits, and that the life support system is functioning properly and efficiently. The longer the flight duration and the more distant the destination, the more critical it becomes to have carefully monitored and automated control systems for life support. Past experiments with the JPL ENose have demonstrated a lifetime of the sensor array, with the software, of around 18 months. The lifetime of the calibration, for some analytes, was as long as 24 months. We are working on a sensor array and new algorithms that will include sensor response time in the analysis. The preliminary array analysis for two analytes shows that the analysis time, of an event, can be dropped from 45 minutes to less than10 minutes and array training time can be cut substantially. We will describe the lifetime testing of an array and show lifetime data on individual sensors. This progress will lead to more rapid identification of analytes, and faster training time of the array.

  7. Studying Mixing in Non-Newtonian Blue Maize Flour Suspensions Using Color Analysis

    PubMed Central

    Trujillo-de Santiago, Grissel; Rojas-de Gante, Cecilia; García-Lara, Silverio; Ballescá-Estrada, Adriana; Alvarez, Mario Moisés

    2014-01-01

    Background Non-Newtonian fluids occur in many relevant flow and mixing scenarios at the lab and industrial scale. The addition of acid or basic solutions to a non-Newtonian fluid is not an infrequent operation, particularly in Biotechnology applications where the pH of Non-Newtonian culture broths is usually regulated using this strategy. Methodology and Findings We conducted mixing experiments in agitated vessels using Non-Newtonian blue maize flour suspensions. Acid or basic pulses were injected to reveal mixing patterns and flow structures and to follow their time evolution. No foreign pH indicator was used as blue maize flours naturally contain anthocyanins that act as a native, wide spectrum, pH indicator. We describe a novel method to quantitate mixedness and mixing evolution through Dynamic Color Analysis (DCA) in this system. Color readings corresponding to different times and locations within the mixing vessel were taken with a digital camera (or a colorimeter) and translated to the CIELab scale of colors. We use distances in the Lab space, a 3D color space, between a particular mixing state and the final mixing point to characterize segregation/mixing in the system. Conclusion and Relevance Blue maize suspensions represent an adequate and flexible model to study mixing (and fluid mechanics in general) in Non-Newtonian suspensions using acid/base tracer injections. Simple strategies based on the evaluation of color distances in the CIELab space (or other scales such as HSB) can be adapted to characterize mixedness and mixing evolution in experiments using blue maize suspensions. PMID:25401332

  8. Application of Dense Array Analysis to Strong Motion Data Recorded at The SMART-1 Array

    NASA Astrophysics Data System (ADS)

    Francois, C.

    2003-12-01

    This paper is part of a project to design an optimal strong motion dense array in New Zealand. The overall project looks at developing a dense network of strong motion seismometers in order to measure directly the rupture process of major seismogenic sources such as the Alpine Fault and strands of the Marlborough Fault System defining the South Island sector of the Australia-Pacific plate boundary zone. This work shows the application of dense array analysis to a set of seismic data recorded at the SMART-1 array in Taiwan (data kindly provided by the Institute of Earth Sciences, Academia Sinica Data Management Center for Strong Motion Seismology - Taiwan). The data have been processed and analysed applying modified MUSIC algorithm with higher computing capabilities giving higher resolution results. The SMART-1 array is an ideal dense array of 37 strong motion instruments set up in the following configuration: 3 concentric circles of radii 200m, 1 km and 2km, and one central station. The studied event called Event 5 was recorded on January 29th 1981 and had a magnitude 6. Event 5 is an ideal case study as its epicentral distance (about 30 km) is comparable to epicentral distances for expected events on the Alpine Fault or on the Hope Fault in New Zealand. Event 5 has been previously widely analysed using strong motion array studies and aftershocks studies but with disagreeing results; this new study hopes to bring new insights in the debate. Using simple fault and velocity models, this latest analysis of Event 5 has given the following rupture properties. It has confirmed one of the hypotheses that the fault ruptured from southeast to northwest. The higher resolution of the computation has improved the location of the hypocentre depth and the location of the propagating rupture front. This allowed resolving changes of velocities in the rupture process and locating asperities in the fault plane. Contrary to the previous array studies, the inferred size of the fault

  9. Performance Analysis of a NASA Integrated Network Array

    NASA Technical Reports Server (NTRS)

    Nessel, James A.

    2012-01-01

    The Space Communications and Navigation (SCaN) Program is planning to integrate its individual networks into a unified network which will function as a single entity to provide services to user missions. This integrated network architecture is expected to provide SCaN customers with the capabilities to seamlessly use any of the available SCaN assets to support their missions to efficiently meet the collective needs of Agency missions. One potential optimal application of these assets, based on this envisioned architecture, is that of arraying across existing networks to significantly enhance data rates and/or link availabilities. As such, this document provides an analysis of the transmit and receive performance of a proposed SCaN inter-network antenna array. From the study, it is determined that a fully integrated internetwork array does not provide any significant advantage over an intra-network array, one in which the assets of an individual network are arrayed for enhanced performance. Therefore, it is the recommendation of this study that NASA proceed with an arraying concept, with a fundamental focus on a network-centric arraying.

  10. Analysis of TOPEX laser retroreflector array characteristics

    NASA Technical Reports Server (NTRS)

    Varghese, Thomas K.

    1993-01-01

    The joint U.S./French TOPEX/POSEIDON mission was successfully launched on August 10, 1992 for the study of ocean height variation using microwave altimetry. Accurate determination of the satellite orbit is paramount to the determination of the above phenomenon. To accomplish this, using laser ranging, the satellite is equipped with a laser retroreflector array (LRA) around the altimeter antennae. The goal of laser ranging is to obtain precision orbits with a radial accuracy of 13 cm to the center of mass of the satellite. This requires the laser range correction to the LRA reference be known at the sub-cm level and is quite a challenge considering the geometry of the LRA. Detailed studies were initiated by the TOPEX project office (Christensen) under the auspices of the CDP/DOSE project (Degnan) at Goddard Space Flight Center.

  11. Analysis and simulation of a magnetic bearing suspension system for a laboratory model annular momentum control device

    NASA Technical Reports Server (NTRS)

    Groom, N. J.; Woolley, C. T.; Joshi, S. M.

    1981-01-01

    A linear analysis and the results of a nonlinear simulation of a magnetic bearing suspension system which uses permanent magnet flux biasing are presented. The magnetic bearing suspension is part of a 4068 N-m-s (3000 lb-ft-sec) laboratory model annular momentum control device (AMCD). The simulation includes rigid body rim dynamics, linear and nonlinear axial actuators, linear radial actuators, axial and radial rim warp, and power supply and power driver current limits.

  12. International Space Station 2A Array Modal Analysis

    NASA Technical Reports Server (NTRS)

    Laible, Michael; Fitzpatrick, Kristin; Grygier, Michael

    2012-01-01

    On December 9th 2009, the International Space Station (ISS) 2A solar array mast experienced prolonged longeron shadowing during a Soyuz undocking. Analytical reconstruction of induced thermal and dynamic structural loads showed an exceedance of the mast buckling limit. Possible structural damage to the solar array mast could have occurred during this event. A Low fidelity video survey of the 2A mast showed no obvious damage of the mast longerons or battens. The decision was made to conduct an on-orbit dynamic test of the 2A array on December 18th, 2009. The test included thruster pluming on the array while photogrammetry data was recorded. The test was similar to other Dedicated Thruster Firings (DTFs) that were performed to measure structural frequency and damping of a solar array. Results of the DTF indicated lower frequency mast modes than model predictions, thus leading to speculation of mast damage. A detailed nonlinear analysis was performed on the 2A array model to assess possible solutions to modal differences. The setup of the parametric nonlinear trade study included the use of a detailed array model and the reduced mass and stiffness matrices of the entire ISS being applied to the array interface. The study revealed that the array attachment structure is nonlinear and thus was the source of error in the model prediction of mast modes. In addition, a detailed study was performed to determine mast mode sensitivity to mast longeron damage. This sensitivity study was performed to assess if the ISS program has sufficient instrumentation for mast damage detection.

  13. Phased array antenna analysis using hybrid finite element methods

    NASA Astrophysics Data System (ADS)

    McGrath, Daniel T.

    1993-06-01

    This research in computational electromagnetics developed a new method for predicting the near-field mutual coupling effects in phased array antennas, using the finite element method (FEM) in combination with integral equations. Accurate feed modeling is accomplished by enforcing continuity between the FEM solution and an arbitrary number of wave guide models across a ground plane aperture. A periodic integral equation is imposed above the antenna's physical structure in order to enforce the radiation condition and to confine the analysis to an array unit cell. The electric field is expanded in terms of vector finite elements, and Galerkin's method is used to write the problem as a matrix equation. A general-purpose computer code was developed and validated by comparing its results to published data for several array types. Its versatility was demonstrated with predictions of the scanning properties of arrays of printed dipoles and printed flared notches.

  14. Analysis of an off road 4WD vehicle's suspension system modification - Case study of aftermarket suspension lift and modification of wheel track size

    NASA Astrophysics Data System (ADS)

    Ross, J.; Hazrat, M. A.; Rasul, M. G.

    2016-07-01

    In this research, a four wheel drive (4WD) suspension of a vehicle has been modified by increasing the ride height to investigate stability and cornering potential of the vehicle through load transfer and variation of roll angle. Further investigation has been conducted to observe the characteristics which are deemed desirable for off road application but detrimental to the on road application. The Constant Radius Cornering Test (CRCT) was chosen as a base method for experimental investigation to observe the effect of the suspension modifications. The test was carried out by undertaking a known radius and cambered corner at a constant speed. For this test, the acceleration and gyroscopic data were measured to check and compare the accuracy of the analysis performed by OptimumDynamics model. The tests were conducted by means of negotiating the curve at the speed of 80 km/h and it was gradually achieved to allow a good consensus of the amount of body roll the vehicle experienced. Using a surveyor's wheel, the radius of the corner was estimated as 160 m and using the gyroscopic sensor, the corner camber was measured at 4 degrees. While comparing the experimental results with the simulation results, the experimental constraints led to higher values than those of the analytical results. The total load transfer reduced by 2.9% with the increased track size. It has been observed that the dynamic load transfer component is lesser than the standard suspension with the aftermarket suspension lift and the upgraded anti-roll bar (ARB). With the simulation of the fitment of the other modifications aimed to improve the characteristics of the raised vehicle, the vehicle showed a reduced tendency towards roll angle due to the stiffened anti-roll bar and the maximum increased wheel track demonstrated reduced lateral load transfer and body roll. Even with these modifications however, the decrease in load transfer is minimal in comparison to what was expected.

  15. Off-road motorbike performance analysis using a rear semi-active suspension

    NASA Astrophysics Data System (ADS)

    Lozoya-Santos, Jorge de J.; Cervantes-Muñoz, Damián.; Ramírez Mendoza, Ricardo

    2015-04-01

    The topic of this paper is the analysis of a control system for a semi active rear suspension in an off-road 2-wheel vehicle. Several control methods are studied, as well as the recently proposed Frequency Estimation Based (FEB) algorithm. The test motorcycle dynamics, as well as the passive, semi active, and the algorithm controlled shock absorber models are loaded into BikeSim, a professional two-wheeled vehicle simulation software, and tested in several road conditions. The results show a detailed comparison of the theoretical performance of the different control approaches in a novel environment for semi active dampers.

  16. Modelling and characteristic analysis of tri-axle trucks with hydraulically interconnected suspensions

    NASA Astrophysics Data System (ADS)

    Ding, Fei; Han, Xu; Luo, Zhen; Zhang, Nong

    2012-12-01

    In this paper, a new hydraulically interconnected suspension (HIS) system is proposed for the implementation of a resistance control for the pitch and bounce modes of tri-axle heavy trucks. A lumped-mass half-truck model is established using the free-body diagram method. The equations of motion of a mechanical and hydraulic coupled system are developed by incorporating the hydraulic strut forces into the mechanical subsystem as externally applied forces. The transfer matrix method (TMM) is used to evaluate the impedance matrix of the hydraulic subsystem consisting of models of fluid pipes, damper valves, accumulators, and three-way junctions. The TMM is further applied to find the quantitative relationships between the hydraulic strut forces and boundary flow of the mechanical-fluid interactive subsystem. The modal analysis method is employed to perform the vibration analysis between the trucks with the conventional suspension and the proposed HIS. Comparison analysis focuses on free vibration with identified eigenvalues and eigenvectors, isolation vibration capacity, and force vibration in terms of the power spectrum density responses. The obtained results show the effectiveness of the proposed HIS system in reducing the pitch motion of sprung mass and simultaneously maintaining the ride comfort. The pitch stiffness is increased while the bounce stiffness is slightly softened. The peak values of sprung mass and wheel hop motions are greatly reduced, and the vibration decay rate of sprung mass is also significantly increased.

  17. Neural network based analysis for chemical sensor arrays

    SciTech Connect

    Hashem, S.; Keller, P.E.; Kouzes, R.T.; Kangas, L.J.

    1995-04-01

    Compact, portable systems capable of quickly identifying contaminants in the field are of great importance when monitoring the environment. In this paper, we examine the effectiveness of using artificial neural networks for real-time data analysis of a sensor array. Analyzing the sensor data in parallel may allow for rapid identification of contaminants in the field without requiring highly selective individual sensors. We use a prototype sensor array which consists of nine tin-oxide Taguchi-type sensors, a temperature sensor, and a humidity sensor. We illustrate that by using neural network based analysis of the sensor data, the selectivity of the sensor array may be significantly improved, especially when some (or all) the sensors are not highly selective.

  18. Thermoelastic analysis of solar cell arrays and their material properties

    NASA Technical Reports Server (NTRS)

    Salama, M. A.; Rowe, W. M.; Yasui, R. K.

    1973-01-01

    A thermoelastic stress analysis procedure is reported for predicting the thermally induced stresses and failures in silicon solar cell arrays. A prerequisite for the analysis is the characterization of the temperature-dependent thermal and mechanical properties of the solar cell materials. Extensive material property testing was carried out in the temperature range -200 to +200 C for the filter glass, P- and N-type silicon, interconnector metals, solder, and several candidate silicone rubber adhesives. The analysis procedure is applied to several solar cell array design configurations. Results of the analysis indicate the optimum design configuration, with respect to compatible materials, effect of the solder coating, and effect of the interconnector geometry. Good agreement was found between results of the analysis and the test program.

  19. Rapid prenatal diagnosis of cytogenetic abnormalities by array CGH analysis

    Technology Transfer Automated Retrieval System (TEKTRAN)

    Array CGH analysis has been shown to be highly accurate for rapid detection of chromosomal aneuploidies and submicroscopic deletions or duplications on fetal DNA samples in a clinical prenatal diagnostic setting. The objective of this study is to present our "post-validation phase" experience with ...

  20. Analysis of solar collector array systems using thermography

    SciTech Connect

    Eden, A.

    1980-01-01

    The use of thermography to analyze large solar collector array systems under dynamic operating conditions is discussed. The research has focused on thermographic techniques and equipment to determine temperature distributions, flow patterns, and air blockages in solar collectors. The results of this extensive study, covering many sites and types of collectors, illustrate the capabilities of infrared analysis as an analysis tool and operation and maintenance procedure when applied to large arrays. Thermographic analysis of most collector systems showed temperature distributions that indicated balanced flow patterns with both the thermographs and the hand-held unit. In three significant cases, blocked or broken collector arrays, which previously had gone undetected, were discovered. Using this analysis, validation studies of large computer codes could examine collector arrays for flow patterns or blockages that could cause disagreement between actual and predicted performance. Initial operation and balancing of large systems could be accomplished without complicated sensor systems not needed for normal operations. Maintenance personnel could quickly check their systems without climbing onto the roof and without complicated sensor systems.

  1. Digital interactive image analysis by array processing

    NASA Technical Reports Server (NTRS)

    Sabels, B. E.; Jennings, J. D.

    1973-01-01

    An attempt is made to draw a parallel between the existing geophysical data processing service industries and the emerging earth resources data support requirements. The relationship of seismic data analysis to ERTS data analysis is natural because in either case data is digitally recorded in the same format, resulting from remotely sensed energy which has been reflected, attenuated, shifted and degraded on its path from the source to the receiver. In the seismic case the energy is acoustic, ranging in frequencies from 10 to 75 cps, for which the lithosphere appears semi-transparent. In earth survey remote sensing through the atmosphere, visible and infrared frequency bands are being used. Yet the hardware and software required to process the magnetically recorded data from the two realms of inquiry are identical and similar, respectively. The resulting data products are similar.

  2. Glycomic analysis: an array of technologies

    PubMed Central

    Krishnamoorthy, Lakshmi; Mahal, Lara K.

    2009-01-01

    Carbohydrates encode biological information necessary for cellular function. The structural diversity and complexity of these sugar residues have necessitated the creation of novel methodologies for their study. This review highlights recent technological advancements that are starting to unravel the intricate web of carbohydrate biology. New methods for the analysis of both glycoconjugates and glycan structures are discussed. With the use of these innovative tools, the field of glycobiology is poised to take center-stage in the post-genomic era of modern biology and medicine. PMID:19728746

  3. Thermoelastic analysis of solar cell arrays and their material properties

    NASA Technical Reports Server (NTRS)

    Salama, M. A.; Rowe, W. M.; Yasui, R. K.

    1974-01-01

    Description of a thermoelastic stress analysis procedure for predicting the thermally induced stresses and failures in silicon solar cell arrays. A prerequisite for the analysis is the characterization of the temperature-dependent thermal and mechanical properties of the solar cell materials. Extensive material property testing was carried out in the temperature range from -200 to +200 C for the filter glass, P- and N-type silicon, interconnector metals, solder, and several candidate silicone rubber adhesives. The analysis procedure is applied to several solar cell array design configurations, which were tested in the Space Molecular Sink. Results of the analysis indicate the optimum design configuration with respect to materials and geometry, effect of the solder coating, and effect of the interconnector geometry.

  4. Analysis of Enriched Uranyl Nitrate in Nested Annular Tank Array

    SciTech Connect

    John D. Bess; James D. Cleaver

    2009-06-01

    Two series of experiments were performed at the Rocky Flats Critical Mass Laboratory during the 1980s using highly enriched (93%) uranyl nitrate solution in annular tanks. [1, 2] Tanks were of typical sizes found in nuclear production plants. Experiments looked at tanks of varying radii in a co-located set of nested tanks, a 1 by 2 array, and a 1 by 3 array. The co-located set of tanks had been analyzed previously [3] as a benchmark for inclusion within the International Handbook of Evaluated Criticality Safety Benchmark Experiments. [4] The current study represents the benchmark analysis of the 1 by 3 array of a series of nested annular tanks. Of the seventeen configurations performed in this set of experiments, twelve were evaluated and nine were judged as acceptable benchmarks.

  5. Analysis of Camera Arrays Applicable to the Internet of Things

    PubMed Central

    Yang, Jiachen; Xu, Ru; Lv, Zhihan; Song, Houbing

    2016-01-01

    The Internet of Things is built based on various sensors and networks. Sensors for stereo capture are essential for acquiring information and have been applied in different fields. In this paper, we focus on the camera modeling and analysis, which is very important for stereo display and helps with viewing. We model two kinds of cameras, a parallel and a converged one, and analyze the difference between them in vertical and horizontal parallax. Even though different kinds of camera arrays are used in various applications and analyzed in the research work, there are few discussions on the comparison of them. Therefore, we make a detailed analysis about their performance over different shooting distances. From our analysis, we find that the threshold of shooting distance for converged cameras is 7 m. In addition, we design a camera array in our work that can be used as a parallel camera array, as well as a converged camera array and take some images and videos with it to identify the threshold. PMID:27011189

  6. Analysis of Camera Arrays Applicable to the Internet of Things.

    PubMed

    Yang, Jiachen; Xu, Ru; Lv, Zhihan; Song, Houbing

    2016-01-01

    The Internet of Things is built based on various sensors and networks. Sensors for stereo capture are essential for acquiring information and have been applied in different fields. In this paper, we focus on the camera modeling and analysis, which is very important for stereo display and helps with viewing. We model two kinds of cameras, a parallel and a converged one, and analyze the difference between them in vertical and horizontal parallax. Even though different kinds of camera arrays are used in various applications and analyzed in the research work, there are few discussions on the comparison of them. Therefore, we make a detailed analysis about their performance over different shooting distances. From our analysis, we find that the threshold of shooting distance for converged cameras is 7 m. In addition, we design a camera array in our work that can be used as a parallel camera array, as well as a converged camera array and take some images and videos with it to identify the threshold. PMID:27011189

  7. Stray light analysis of the Cryogenic Limb Array Etalon Spectrometer

    NASA Technical Reports Server (NTRS)

    Birge, Thomas A.

    1987-01-01

    The stray light analysis performance of the Cryogenic Limb Array Etalon Spectrometer (CLAES), which is to be flown on NASA's Upper Atmospheric Research Satellite, was evaluated using the APART/PADE code, and the results are reported. The analysis, together with Brassboard measurements, confirm that the data to be collected by CLAES should not be significantly degraded by stray light resulting from scattering within the system. It is also verified that diffraction effects are successfully controlled by the cascaded stop configuration.

  8. [Determination of Azospirillum Brasilense Cells With Bacteriophages via Electrooptical Analysis of Microbial Suspensions].

    PubMed

    Gulii, O I; Karavayeva, O A; Pavlii, S A; Sokolov, O I; Bunin, V D; Ignatov, O V

    2015-01-01

    The dependence-of changes in the electrooptical properties of Azospirillum brasilense cell suspension Sp7 during interaction with bacteriophage ΦAb-Sp7 on the number and time of interactions was studied. Incubation of cells with bacteriophage significantly changed the electrooptical signal within one minute. The selective effect of bacteriophage ΦAb on 18 strains of bacteria of the genus Azospirillum was studied: A. amazonense Ami4, A. brasilense Sp7, Cd, Sp107, Sp245, Jm6B2, Brl4, KR77, S17, S27, SR55, SR75, A. halopraeferans Au4, A. irakense KBC1, K A3, A. lipoferum Sp59b, SR65 and RG20a. We determined the limit of reliable determination of microbial cells infected with bacteriophage: - 10(4) cells/mL. The presence of foreign cell cultures of E. coli B-878 and E. coli XL-1 did not complicate the detection of A brasilense Sp7 cells with the use of bacteriophage ΦAb-Sp7. The results demonstrated that bacteriophage (ΦAb-Sp7 can be used for the detection of Azospirillum microbial cells via t electrooptical analysis of cell suspensions. PMID:26204775

  9. Cryo-FIB-nanotomography for quantitative analysis of particle structures in cement suspensions.

    PubMed

    Holzer, L; Gasser, P H; Kaech, A; Wegmann, M; Zingg, A; Wepf, R; Muench, B

    2007-09-01

    Cryo-FIB-nanotomography is a novel high-resolution 3D-microscopy technique, which opens new possibilities for the quantitative microstructural analysis of complex suspensions. In this paper, we describe the microstructural changes associated with dissolution and precipitation processes occurring in a fresh cement paste, which has high alumina and sulphate contents. During the first 6 min, precipitation of ettringite leads to a general decrease of the particle size distribution. In the unhydrated cement paste almost no particles smaller than 500 nm are present, whereas after 6 min this size class already represents 9 vol%. The precipitation of ettringite also leads to a significant increase of the particle number density from 0.294*10(9)/mm(3) at t(0min) to 20.55*10(9)/mm(3) at t(6min). Correspondingly the surface area increases from 0.75 m(2)/g at t(0min) to 2.13 m(2)/g at t(6min). The small ettringite particles tend to form agglomerates, which strongly influence the rheological properties. The particular strength of cryo-FIB-nt is the potential to quantify particle structures in suspension and thereby also to describe higher-order topological features such as the particle-particle interfaces, which is important for the study of agglomeration processes. PMID:17760616

  10. Analysis of systolic and systolic-type arrays

    SciTech Connect

    Jover, J.M.

    1986-01-01

    Synchronous, multiprocessor systems interconnected by fixed links are studied. These special-purpose systems, called systolic-type arrays, perform specific algorithms at a higher throughput rate than the sequential architecture of van Neumann. The main contributions of this thesis are the analysis of systolic-type arrays, and the design of one such complex system. In the analysis problem the topology of the network, the function performed by each processor (including timing information), and the input data streams are given. I/O algorithm performed by the array, and the iteration interval (i.e., the time between two consecutive input samples) are to be determined. Solution to the analysis problem turns out to be based on the simple, at least in retrospect, observation that analysis is the reverse of synthesis (design). In design, the start is with a mathematical algorithm and a representation of it as a signal flow graph (SFG) in which the computations (function evaluations) are presented by delay-free (instantaneous) blocks and the index shifts in the sequences processed by the algorithm are all lumped into so-called z/sup -1/ blocks. In the analysis problem, start is also with a physical implementation described by its computational blocks, their associated processing times, and their interconnections. Also presented is parallel architecture for the measurement update step of the Kalman filter, which estimates a vector parameter.

  11. Erratum to: Automated Sample Preparation Method for Suspension Arrays using Renewable Surface Separations with Multiplexed Flow Cytometry Fluorescence Detection

    SciTech Connect

    Grate, Jay W.; Bruckner-Lea, Cindy J.; Jarrell, Ann E.; Chandler, Darrell P.

    2003-04-10

    In this paper we describe a new method of automated sample preparation for multiplexed biological analysis systems that use flow cytometry fluorescence detection. In this approach, color-encoded microspheres derivatized to capture particular biomolecules are temporarily trapped in a renewable surface separation column to enable perfusion with sample and reagents prior to delivery to the detector. This method provides for separation of the biomolecules of interest from other sample matrix components as well as from labeling solutions.

  12. Numerical Analysis of Magnetic Field Distribution of Magnetic Micro-barcodes for Suspension Assay Technology

    NASA Astrophysics Data System (ADS)

    Son, Vo Thanh; Anandakumar, S.; Kim, CheolGi; Jeong, Jong-Ruyl

    2011-12-01

    In this study, we have investigated real-time decoding feasibility of magnetic micro-barcodes in a microfluidic channel by using numerical analysis of magnetic field distribution of the micro-barcodes. The vector potential model based on a molecular current has been used to obtain magnetic stray field distribution of ferromagnetic bars which consisting of the micro-barcodes. It reveals that the stray field distribution of the micro-barcodes strongly depends on the geometries of the ferromagnetic bar. Interestingly enough, we have found that one can avoide the miniaturization process of a magnetic sensor device needed to increase the sensitivity by optimizing the geometries of micro-barcodes. We also estimate a magnetic sensor response depending on flying height and lateral misalignment of the micro-barcodes over the sensor position and found that control of the flying height is crucial factor to enhance the detection sensitivity and reproducibility of a magnetic sensor signal in the suspension assay technology.

  13. Digital control analysis and design of a field-sensed magnetic suspension system.

    PubMed

    Li, Jen-Hsing; Chiou, Juing-Shian

    2015-01-01

    Magnetic suspension systems are mechatronic systems and crucial in several engineering applications, such as the levitation of high-speed trains, frictionless bearings, and wind tunnels. Magnetic suspension systems are nonlinear and unstable systems; therefore, they are suitable educational benchmarks for testing various modeling and control methods. This paper presents the digital modeling and control of magnetic suspension systems. First, the magnetic suspension system is stabilized using a digital proportional-derivative controller. Subsequently, the digital model is identified using recursive algorithms. Finally, a digital mixed linear quadratic regulator (LQR)/H∞ control is adopted to stabilize the magnetic suspension system robustly. Simulation examples and a real-world example are provided to demonstrate the practicality of the study results. In this study, a digital magnetic suspension system model was developed and reviewed. In addition, equivalent state and output feedback controls for magnetic suspension systems were developed. Using this method, the controller design for magnetic suspension systems was simplified, which is the novel contribution of this study. In addition, this paper proposes a complete digital controller design procedure for magnetic suspension systems. PMID:25781508

  14. Digital Control Analysis and Design of a Field-Sensed Magnetic Suspension System

    PubMed Central

    Li, Jen-Hsing; Chiou, Juing-Shian

    2015-01-01

    Magnetic suspension systems are mechatronic systems and crucial in several engineering applications, such as the levitation of high-speed trains, frictionless bearings, and wind tunnels. Magnetic suspension systems are nonlinear and unstable systems; therefore, they are suitable educational benchmarks for testing various modeling and control methods. This paper presents the digital modeling and control of magnetic suspension systems. First, the magnetic suspension system is stabilized using a digital proportional-derivative controller. Subsequently, the digital model is identified using recursive algorithms. Finally, a digital mixed linear quadratic regulator (LQR)/H∞ control is adopted to stabilize the magnetic suspension system robustly. Simulation examples and a real-world example are provided to demonstrate the practicality of the study results. In this study, a digital magnetic suspension system model was developed and reviewed. In addition, equivalent state and output feedback controls for magnetic suspension systems were developed. Using this method, the controller design for magnetic suspension systems was simplified, which is the novel contribution of this study. In addition, this paper proposes a complete digital controller design procedure for magnetic suspension systems. PMID:25781508

  15. Applications of nylon membrane arrays to gene expression analysis.

    PubMed

    Cox, J M

    2001-04-01

    Gene expression analyses by hybridization of probes derived from mRNA to cDNA targets arrayed on a nylon membranes have been performed with increasing frequency and success over the last decade. While the initial costs of generating arrays are moderately high, they are now available commercially as complete packages which include the membranes and associated image analysis software for acquisition and processing of the data. Arrays can be used to generate information concerning the expression of mRNA from cells treated with various agents or from different tissues, e.g. comparing diseased with normal controls. To date, many groups, including immunologists, have used this technology to examine gene expression within their area of biological interest. The main characteristic of these systems is the large amount of data generated, since the expression of many thousands of genes are measured in parallel. The main practical issues are sensitivity of detection, reproducibility, comparability with other systems (e.g. Northern blots) and processing of data. Some of the significant applications of nylon array technology to date are reviewed in this chapter, and with these issues in mind, we include a discussion of our own experiences in this area. PMID:11251218

  16. Array-Pattern-Match Compiler for Opportunistic Data Analysis

    NASA Technical Reports Server (NTRS)

    James, Mark

    2006-01-01

    A computer program has been written to facilitate real-time sifting of scientific data as they are acquired to find data patterns deemed to warrant further analysis. The patterns in question are of a type denoted array patterns, which are specified by nested parenthetical expressions. [One example of an array pattern is ((>3) 0 (not=1)): this pattern matches a vector of at least three elements, the first of which exceeds 3, the second of which is 0, and the third of which does not equal 1.] This program accepts a high-level description of a static array pattern and compiles a highly optimal and compact other program to determine whether any given instance of any data array matches that pattern. The compiler implemented by this program is independent of the target language, so that as new languages are used to write code that processes scientific data, they can easily be adapted to this compiler. This program runs on a variety of different computing platforms. It must be run in conjunction with any one of a number of Lisp compilers that are available commercially or as shareware.

  17. Analysis of finite multifrequency slotted waveguide antenna arrays

    NASA Astrophysics Data System (ADS)

    Ponomarev, L. I.; Rud', S. V.; Ryzhikov, A. V.

    1988-02-01

    A model of a finite multifrequency slotted waveguide antenna array based on multimode waveguides is developed on the basis of an integral-equation method. Numerical-analysis results are presented which make it possible to assess the mutual distortions introduced in the radiation characteristics in each of the operating subbands. It is noted that these distortions can be minimized by a proper mutual arrangement of the slots as well as by an appropriate type of waveguide excitation.

  18. Guidelines for Optimisation of a Multiplex Oligonucleotide Ligation-PCR for Characterisation of Microbial Pathogens in a Microsphere Suspension Array

    PubMed Central

    Wuyts, Véronique; Roosens, Nancy H. C.; Marchal, Kathleen; De Keersmaecker, Sigrid C. J.

    2015-01-01

    With multiplex oligonucleotide ligation-PCR (MOL-PCR) different molecular markers can be simultaneously analysed in a single assay and high levels of multiplexing can be achieved in high-throughput format. As such, MOL-PCR is a convenient solution for microbial detection and identification assays where many markers should be analysed, including for routine further characterisation of an identified microbial pathogenic isolate. For an assay aimed at routine use, optimisation in terms of differentiation between positive and negative results and of cost and effort is indispensable. As MOL-PCR includes a multiplex ligation step, followed by a singleplex PCR and analysis with microspheres on a Luminex device, several parameters are accessible for optimisation. Although MOL-PCR performance may be influenced by the markers used in the assay and the targeted bacterial species, evaluation of the method of DNA isolation, the probe concentration, the amount of microspheres, and the concentration of reporter dye is advisable in the development of any MOL-PCR assay. Therefore, we here describe our observations made during the optimisation of a 20-plex MOL-PCR assay for subtyping of Salmonella Typhimurium with the aim to provide a possible workflow as guidance for the development and optimisation of a MOL-PCR assay for the characterisation of other microbial pathogens. PMID:25705689

  19. Analysis of Semi-Active and Passive Suspensions System for Off-Road Vehicles

    NASA Astrophysics Data System (ADS)

    BenLahcene, Zohir; Faris, Waleed F.; Khan, M. D. Raisuddin

    2009-03-01

    The speed of off-road vehicles over rough terrain is generally determined by the ride quality not by the engine power. For this reason, researches are currently being undertaking to improve the ride dynamics of these vehicles using an advanced suspension system. This study intends to provide a preliminary evaluation of whether semi-active suspensions are beneficial to improving ride and handling in off-road vehicles. One of the greatest challenges in designing off-road vehicle suspension system is maintaining a good balance between vehicle ride and handling. Three configurations of these vehicles; 2-axle, 3-xle and 4-axles have been studied and their performances are compared. The application of several control policies of semi-active suspension system, namely skyhook; ground-hook and hybrid controls have been analyzed and compared with passive systems. The results show that the hybrid control policy yields better comfort than a passive suspension, without reducing the road-holding quality or increasing the suspension displacement. The hybrid control policy is also shown to be a better compromise between comfort, road-holding and suspension displacement than the skyhook and ground-hook control policies. Results show an improvement in ride comfort and vehicle handling using 4-axle over 3-axle and 2-axle when emphasis is placed on the response of the vehicle body acceleration, suspension and tyre deflection.

  20. Phase velocity approach for Suspension P-S Logging data analysis

    NASA Astrophysics Data System (ADS)

    Lin, Chun-Hung; Lin, Chih-Ping

    2016-06-01

    Due to the short receiver interval, results of Suspension P-S Logging are sensitive to the picking of first arrivals, which is currently carried out by manual picking in the time domain. However, manual picking can be ambiguous and depends heavily on the data quality and analysts' experiences. Furthermore, no information regarding the effective frequency is obtained from first arrival times. A data reduction method based on phase velocity analysis of borehole acoustic waves is proposed herein. The aim is to provide an automatic procedure for more objective velocity analysis. The procedure utilizes the two-channel dispersion curve analysis, but becomes semi-empirical because an additional assumption is made to simplify the calculation and avoid the phase un-wrapping problem associated with the lack of low-frequency information. Some field data were used to evaluate the empirical parameter for calculating the shear wave velocity. Results show that the velocity difference between the proposed method and the conventional method based on manually-picked first arrivals is mostly within 15%. The proposed method can be automated and provide the effective frequency of the obtained shear wave velocity.

  1. TIME-FREQUENCY Analysis of a Suspension Bridge Based on GPS

    NASA Astrophysics Data System (ADS)

    XU, L.; GUO, J. J.; JIANG, J. J.

    2002-06-01

    This paper describes the results obtained from full-scale measurements of Humen bridge, which is the second longest suspension bridge in China. A real-time kinematic (RTK) global positioning system (GPS) has been developed and installed on the Humen bridge for on-line monitoring of bridge deck movements. The field wind-induced vibration data were measured by this monitoring system. Three system identification techniques are then adopted in the modal analysis of the wind-induced vibration response: the time-frequency Wigner distribution (WD) technique, the frequency-domain fast Fourier transform (FFT) technique and the time-domain auto-regressive moving average vector (ARMAV) technique. The WD technique can recognize close modal coupling and non-stationary response. The FFT technique can on site verify the quality of the measurements, but its frequency resolution is low and damping estimates are unreliable. The ARMAV method allows for gaining high-frequency resolution. However, it is strictly related to the stationary hypothesis. It is a general conclusion that we can improve the quality of the analysis and get more precise characteristics of the signal by these three methods. In addition, the WD combined with ARMAV seems to be the best case in quantitative analysis of fast-changing vibration signals.

  2. Spectral Cytometry Has Unique Properties Allowing Multicolor Analysis of Cell Suspensions Isolated from Solid Tissues

    PubMed Central

    Schmutz, Sandrine; Valente, Mariana

    2016-01-01

    Flow cytometry, initially developed to analyze surface protein expression in hematopoietic cells, has increased in analytical complexity and is now widely used to identify cells from different tissues and organisms. As a consequence, data analysis became increasingly difficult due the need of large multi-parametric compensation matrices and to the eventual auto-fluorescence frequently found in cell suspensions obtained from solid organs. In contrast with conventional flow cytometry that detects the emission peak of fluorochromes, spectral flow cytometry distinguishes the shapes of emission spectra along a large range of continuous wave lengths. The data is analyzed with an algorithm that replaces compensation matrices and treats auto-fluorescence as an independent parameter. Thus, spectral flow cytometry should be capable to discriminate fluorochromes with similar emission peaks and provide multi-parametric analysis without compensation requirements. Here we show that spectral flow cytometry achieves a 21-parametric (19 fluorescent probes) characterization and deals with auto-fluorescent cells, providing high resolution of specifically fluorescence-labeled populations. Our results showed that spectral flow cytometry has advantages in the analysis of cell populations of tissues difficult to characterize in conventional flow cytometry, such as heart and intestine. Spectral flow cytometry thus combines the multi-parametric analytical capacity of the highest performing conventional flow cytometry without the requirement for compensation and enabling auto-fluorescence management. PMID:27500930

  3. Suspension Geometry Measuring

    NASA Astrophysics Data System (ADS)

    Kao, M. J.; Yu, C. C.; Chang, H.; Tsung, T. T.; Lin, H. M.

    2006-10-01

    This paper describes the instrumentation and analysis of the Vehicle suspension's electrical signals. It will measure the Vehicle suspensions' Vertical Displacement, Track Change, Camber Angle, Caster Angle Steer Angle and convert physical quantity into electrical signals in a various vehicle load change. With using electrical signals for computer control, the electrical controlled vehicle has brought great convenience, great safety and thoughtful kindness vehicle system in our daily life. It will measure the Vehicle suspensions' Vertical Displacement, Track Change, Camber Angle, Caster Angle Steer Angle and convert physical quantity into electrical signals in a various vehicle load change. The function of a suspension system in an automobile is to improve ride comfort and stability. Advances in electronic control technology, applied to the automobile, can improve those functions. The results show that the photocell can convert the electrical signals of suspension for peripheral communications link between the vehicle driving and the electronic control unit (ECU) employed for processing.

  4. Analysis of the static magnetic field-dependent optical transmission of Ni nanorod colloidal suspensions

    NASA Astrophysics Data System (ADS)

    Krämer, Florian; Gratz, Micha; Tschöpe, Andreas

    2016-07-01

    The magnetic field-dependent optical transmission of dilute Ni nanorod aqueous suspensions was investigated. A series of four samples of nanorods were synthesized using the AAO template method and processed to stable colloids. The distributions of their length and diameter were characterized by analysis of TEM images and revealed average diameters of ˜25 nm and different lengths in the range of 60 nm-1100 nm. The collinear magnetic and optical anisotropy was studied by static field-dependent transmission measurements of linearly polarized light parallel and perpendicular to the magnetic field direction. The experimental results were modelled assuming the field-dependent orientation distribution function of a superparamagnetic ensemble for the uniaxial ferromagnetic nanorods in liquid dispersion and extinction cross sections for longitudinal and transversal optical polarization derived from different approaches, including the electrostatic approximation and the separation of variables method, both applied to spheroidal particles, as well as finite element method simulations of spheroids and capped cylindrical particles. The extinction cross sections were compared to reveal the differences associated with the approximations of homogeneous polarization and/or particle shape. The consequences of these approximations for the quantitative analysis of magnetic field-dependent optical transmission measurements were investigated and a reliable protocol derived. Furthermore, the changes in optical cross sections induced by electromagnetic interaction between two nanorods in parallel end-to-end and side-by-side configuration as a function of their separation were studied.

  5. Bioimpedance analysis for the characterization of breast cancer cells in suspension.

    PubMed

    Guofeng Qiao; Wei Wang; Wei Duan; Fan Zheng; Sinclair, A J; Chatwin, C R

    2012-08-01

    The bioimpedance spectroscopy (BIS) technique is potentially a useful tool to differentiate malignancy based on the variation of electrical properties presented by different tissues and cells. The different tissues and cells present variant electrical resistance and reactance when excited at different frequencies. The main purpose of this area of research is to use impedance measurements over a low-frequency bandwidth ranging from 1 kHz to 3 MHz to 1) differentiate the pathological stages of cancer cells under laboratory conditions and 2) permit the extraction of electrical parameters related to cellular information for further analysis. This provides evidence to form the basis of bioimpedance measurement at the cellular level and aids the potential future development of rapid diagnostics from biopsy materials. Three cell lines, representing normal breast epithelia and different pathological stages of breast cancer, have been measured using a standard impedance analyzer driving a four-electrode chamber filled with different cell suspensions. We identify the specific BIS profile for each cell type and determine whether these can be differentiated. In addition, the electrical parameters, e.g., the intracellular conductivity, membrane capacitance/capacity, characteristic frequency, are extracted by the use of equivalent circuit models and physical models to provide details of the cell electric signatures for further analysis of cancer cell pathology. PMID:22692870

  6. Genetic heterogeneity in rhabdomyosarcoma revealed by SNP array analysis.

    PubMed

    Walther, Charles; Mayrhofer, Markus; Nilsson, Jenny; Hofvander, Jakob; Jonson, Tord; Mandahl, Nils; Øra, Ingrid; Gisselsson, David; Mertens, Fredrik

    2016-01-01

    Rhabdomyosarcoma (RMS) is the most common soft tissue sarcoma in children and adolescents. Alveolar (ARMS) and embryonal (ERMS) histologies predominate, but rare cases are classified as spindle cell/sclerosing (SRMS). For treatment stratification, RMS is further subclassified as fusion-positive (FP-RMS) or fusion-negative (FN-RMS), depending on whether a gene fusion involving PAX3 or PAX7 is present or not. We investigated 19 cases of pediatric RMS using high resolution single-nucleotide polymorphism (SNP) array. FP-ARMS displayed, on average, more structural rearrangements than ERMS; the single FN-ARMS had a genomic profile similar to ERMS. Apart from previously known amplification (e.g., MYCN, CDK4, and MIR17HG) and deletion (e.g., NF1, CDKN2A, and CDKN2B) targets, amplification of ERBB2 and homozygous loss of ASCC3 or ODZ3 were seen. Combining SNP array with cytogenetic data revealed that most cases were polyploid, with at least one case having started as a near-haploid tumor. Further bioinformatic analysis of the SNP array data disclosed genetic heterogeneity, in the form of subclonal chromosomal imbalances, in five tumors. The outcome was worse for patients with FP-ARMS than ERMS or FN-ARMS (6/8 vs. 1/9 dead of disease), and the only children with ERMS showing intratumor diversity or with MYOD1 mutation-positive SRMS also died of disease. High resolution SNP array can be useful in evaluating genomic imbalances in pediatric RMS. PMID:26482321

  7. DNA array analysis in a Microsoft Windows environment.

    PubMed

    Conway, T; Kraus, B; Tucker, D L; Smalley, D J; Dorman, A F; McKibben, L

    2002-01-01

    Microsoft Windows-based computers have evolved to the point that they provide sufficient computational and visualization power for robust analysis of DNA array data. In fact, smaller laboratories might prefer to carry out some or all of their analyses and visualization in a Windows environment, rather than alternative platforms such as UNIX. We have developed a series of manually executed macros written in Visual Basic for Microsoft Excel spreadsheets, that allows for rapid and comprehensive gene expression data analysis. The first macro assigns gene names to spots on the DNA array and normalizes individual hybridizations by expressing the signal intensity for each gene as a percentage of the sum of all gene intensities. The second macro streamlines statistical consideration of the confidence in individual gene measurements for sets of experimental replicates by calculating probability values with the Student's t test. The third macro introduces a threshold value, calculates expression ratios between experimental conditions, and calculates the standard deviation of the mean of the log ratio values. Selected columns of data are copied by a fourth macro to create a processed data set suitable for entry into a Microsoft Access database. An Access database structure is described that allows simple queries across multiple experiments and export of data into third-party data visualization software packages. These analysis tools can be used in their present form by others working with commercial E. coli membrane arrays, or they may be adapted for use with other systems. The Excel spreadsheets with embedded Visual Basic macros and detailed instructions for their use are available at http://www.ou.edu/microarray. PMID:11808684

  8. Experimental Study of Membrane Fouling during Crossflow Microfiltration of Yeast and Bacteria Suspensions: Towards an Analysis at the Microscopic Level

    PubMed Central

    Ben Hassan, Ines; Ennouri, Monia; Lafforgue, Christine; Schmitz, Philippe; Ayadi, Abdelmoneim

    2013-01-01

    Microfiltration of model cell suspensions combining macroscopic and microscopic approaches was studied in order to better understand microbial membrane fouling mechanisms. The respective impact of Saccharomyces cerevisiae yeast and Escherichia coli bacteria on crossflow microfiltration performances was investigated using a multichannel ceramic 0.2 µm membrane. Pure yeast suspensions (5 µm ovoid cells) and mixtures of yeast and bacteria (1 to 2.5 µm rod shape cells) were considered in order to analyse the effect of interaction between these two microorganisms on fouling reversibility. The resistances varied significantly with the concentration and characteristics of the microorganisms. Membrane fouling with pure yeast suspension was mainly reversible. For yeast and bacteria mixed suspensions (6 g L−1 yeast concentration) the increase in bacteria from 0.15 to 0.30 g L−1 increased the percentage of normalized reversible resistance. At 10 g L−1 yeast concentration, the addition of bacteria tends to increase the percentage of normalized irreversible resistance. For the objective of performing local analysis of fouling, an original filtration chamber allowing direct in situ observation of the cake by confocal laser scanning microscopy (CLSM) was designed, developed and validated. This device will be used in future studies to characterize cake structure at the microscopic scale. PMID:24958619

  9. Thermal Sensor Arrays for The Combinatorial Analysis of Thin Films

    NASA Astrophysics Data System (ADS)

    McCluskey, Patrick James

    2011-12-01

    Membrane-based thermal sensor arrays were developed for the high-throughput analysis of the thermophysical properties of thin films. The continuous growth of integrated circuits and microelectromechanical systems, as well as the development of functional materials and the optimization of materials properties, have produced the need for instruments capable of fast materials screening and analysis at reduced length scales. Two instruments were developed based on a similar architecture, one to measure thermal transport properties and the other to perform calorimetry measurements. Both have the capability to accelerate the pace of materials development and understanding using combinatorial measurement methods. The shared architecture of the instruments consists of a silicon-based micromachined array of thermal sensors. Each sensor consists of a SiN X membrane and a W heating element that also serves as a temperature gauge. The array design allows the simultaneous creation of a library of thin film samples by various deposition techniques while systematically varying a parameter of interest across the device. The membrane-based sensors have little thermal mass making them extremely sensitive to changes in thermal energy. The nano-thermal transport array has an array of sensors optimized for sensitivity to heat loss. The heat loss is determined from the temperature response of the sensor to an applied current. An analytical model is used with a linear regression analysis to fit the thermal properties of the samples to the temperature response. The assumptions of the analytical model are validated with a finite element model. Measured thermal properties include specific heat, thermal effusivity, thermal conductivity, and emissivity. The technique is demonstrated by measuring the thermal transport properties of sputter deposited Cu multilayers with a total film thickness from 15 to 470 nm. The experimental results compare well to a theory based on electronic thermal

  10. Cluster Computing For Real Time Seismic Array Analysis.

    NASA Astrophysics Data System (ADS)

    Martini, M.; Giudicepietro, F.

    A seismic array is an instrument composed by a dense distribution of seismic sen- sors that allow to measure the directional properties of the wavefield (slowness or wavenumber vector) radiated by a seismic source. Over the last years arrays have been widely used in different fields of seismological researches. In particular they are applied in the investigation of seismic sources on volcanoes where they can be suc- cessfully used for studying the volcanic microtremor and long period events which are critical for getting information on the volcanic systems evolution. For this reason arrays could be usefully employed for the volcanoes monitoring, however the huge amount of data produced by this type of instruments and the processing techniques which are quite time consuming limited their potentiality for this application. In order to favor a direct application of arrays techniques to continuous volcano monitoring we designed and built a small PC cluster able to near real time computing the kinematics properties of the wavefield (slowness or wavenumber vector) produced by local seis- mic source. The cluster is composed of 8 Intel Pentium-III bi-processors PC working at 550 MHz, and has 4 Gigabytes of RAM memory. It runs under Linux operating system. The developed analysis software package is based on the Multiple SIgnal Classification (MUSIC) algorithm and is written in Fortran. The message-passing part is based upon the LAM programming environment package, an open-source imple- mentation of the Message Passing Interface (MPI). The developed software system includes modules devote to receiving date by internet and graphical applications for the continuous displaying of the processing results. The system has been tested with a data set collected during a seismic experiment conducted on Etna in 1999 when two dense seismic arrays have been deployed on the northeast and the southeast flanks of this volcano. A real time continuous acquisition system has been simulated by

  11. Analysis of semi-active vehicle suspension system using airspring and MR damper

    NASA Astrophysics Data System (ADS)

    Tesfay, A. H.; Goel, V. K.

    2015-12-01

    With the new advancements in vibration control strategies and controllable actuator manufacturing, semi-active actuators and dampers are finding their way as an essential part of vibration isolators, particularly in vehicle suspension systems. This is attributed to the fact that in a semi-active system, the damping coefficients can be adjusted to improve ride comfort and road handling performances. The currently available semi-active damper technology uses MR fluid to control the damping characteristics of the suspension system. In addition to MR dampers, combining air springs in a semi-active suspension system leads to better handling and ride performance in vehicles. Furthermore, the use of air spring in semi-active suspension system helps to ease design of variable spring stiffness. This easy design opportunity leads to independent control of stiffness and ride height of the vehicle. This paper deals with the design and modelling of variable stiffness air spring for semi-active suspension system, modelling of semi-active suspension systems with variable stiffness and MR damper, and study their

  12. Performance analysis of a semiactive suspension system with particle swarm optimization and fuzzy logic control.

    PubMed

    Qazi, Abroon Jamal; de Silva, Clarence W; Khan, Afzal; Khan, Muhammad Tahir

    2014-01-01

    This paper uses a quarter model of an automobile having passive and semiactive suspension systems to develop a scheme for an optimal suspension controller. Semi-active suspension is preferred over passive and active suspensions with regard to optimum performance within the constraints of weight and operational cost. A fuzzy logic controller is incorporated into the semi-active suspension system. It is able to handle nonlinearities through the use of heuristic rules. Particle swarm optimization (PSO) is applied to determine the optimal gain parameters for the fuzzy logic controller, while maintaining within the normalized ranges of the controller inputs and output. The performance of resulting optimized system is compared with different systems that use various control algorithms, including a conventional passive system, choice options of feedback signals, and damping coefficient limits. Also, the optimized semi-active suspension system is evaluated for its performance in relation to variation in payload. Furthermore, the systems are compared with respect to the attributes of road handling and ride comfort. In all the simulation studies it is found that the optimized fuzzy logic controller surpasses the other types of control. PMID:24574868

  13. Performance Analysis of a Semiactive Suspension System with Particle Swarm Optimization and Fuzzy Logic Control

    PubMed Central

    Qazi, Abroon Jamal; de Silva, Clarence W.

    2014-01-01

    This paper uses a quarter model of an automobile having passive and semiactive suspension systems to develop a scheme for an optimal suspension controller. Semi-active suspension is preferred over passive and active suspensions with regard to optimum performance within the constraints of weight and operational cost. A fuzzy logic controller is incorporated into the semi-active suspension system. It is able to handle nonlinearities through the use of heuristic rules. Particle swarm optimization (PSO) is applied to determine the optimal gain parameters for the fuzzy logic controller, while maintaining within the normalized ranges of the controller inputs and output. The performance of resulting optimized system is compared with different systems that use various control algorithms, including a conventional passive system, choice options of feedback signals, and damping coefficient limits. Also, the optimized semi-active suspension system is evaluated for its performance in relation to variation in payload. Furthermore, the systems are compared with respect to the attributes of road handling and ride comfort. In all the simulation studies it is found that the optimized fuzzy logic controller surpasses the other types of control. PMID:24574868

  14. Time response analysis in suspension system design of a high-speed car

    NASA Astrophysics Data System (ADS)

    Pagwiwoko, Cosmas Pandit

    2009-12-01

    A land speed record vehicle is designed to run on a flat surface like salt lake where the wheels are normally made from solid metal with a special suspension system. The suspension is designed to provide a stable platform to keep the wheel treads on tract, to insulate the car and the driver from the surface irregularities and to take part of good handling properties. The surface condition of the lake beds is basically flat without undulations but with inconsistent surface textures and ridges. Spring with nonlinear rate is used with the reason that the resistance builds up roughly proportional to the aerodynamic download for keeping the height more nearly constant. The objective of the work is to produce an efficient method for assisting the design of suspension system. At the initial step, the stiffness and the damping constants are determined based on RMS optimization by following the optimization strategy i.e. to minimize the absolute acceleration respect to the relative displacement of the suspension. Power bond graph technique is then used to model the nonlinearity of the components i.e. spring and dashpot of the suspension system. This technique also enables to incorporate the interactions of dynamic response of the vehicle's body with aerodynamic flow as a result of the base excitation of the ground to the wheels. The simulation is conducted on the platform of Simulink-MATLAB and the interactions amongst the components within the system are observed in time domain to evaluate the effectiveness of the suspension.

  15. Time response analysis in suspension system design of a high-speed car

    NASA Astrophysics Data System (ADS)

    Pagwiwoko, Cosmas Pandit

    2010-03-01

    A land speed record vehicle is designed to run on a flat surface like salt lake where the wheels are normally made from solid metal with a special suspension system. The suspension is designed to provide a stable platform to keep the wheel treads on tract, to insulate the car and the driver from the surface irregularities and to take part of good handling properties. The surface condition of the lake beds is basically flat without undulations but with inconsistent surface textures and ridges. Spring with nonlinear rate is used with the reason that the resistance builds up roughly proportional to the aerodynamic download for keeping the height more nearly constant. The objective of the work is to produce an efficient method for assisting the design of suspension system. At the initial step, the stiffness and the damping constants are determined based on RMS optimization by following the optimization strategy i.e. to minimize the absolute acceleration respect to the relative displacement of the suspension. Power bond graph technique is then used to model the nonlinearity of the components i.e. spring and dashpot of the suspension system. This technique also enables to incorporate the interactions of dynamic response of the vehicle's body with aerodynamic flow as a result of the base excitation of the ground to the wheels. The simulation is conducted on the platform of Simulink-MATLAB and the interactions amongst the components within the system are observed in time domain to evaluate the effectiveness of the suspension.

  16. Test plane uniformity analysis for the MSFC solar simulator lamp array

    NASA Technical Reports Server (NTRS)

    Griner, D. B.

    1976-01-01

    A preliminary analysis was made on the solar simulator lamp array. It is an array of 405 tungsten halogen lamps with Fresnel lenses to achieve the required spectral distribution and collimation. A computer program was developed to analyze lamp array performance at the test plane. Measurements were made on individual lamp lens combinations to obtain data for the computer analysis. The analysis indicated that the performance of the lamp array was about as expected, except for a need to position the test plane within 2.7 m of the lamp array to achieve the desired 7 percent uniformity of illumination tolerance.

  17. Dielectric permittivity of suspensions

    SciTech Connect

    Sushko, M. Ya.

    2007-08-15

    A strict macroscopic analysis of the limiting long-wavelength permittivity of a model suspension is presented in which the suspension is considered as a finely dispersed system consisting of isotropic dielectric balls with piecewise-continuous radial permittivity profile. The analysis is performed within the framework of the notion of compact groups of inhomogeneities and the procedure of field averaging over volumes significantly exceeding the scale of these groups. The indicated value is described by the Lorentz-Lorenz formula. The effective polarizability of balls in the suspension is reconstructed from their parameters and the parameters of the medium by means of integration. The result is valid for any concentration of the balls at which the suspension remains macroscopically homogeneous and isotropic with respect to the field and for an arbitrary difference between the ball and medium permittivities.

  18. Design and analysis of annular antenna arrays with different reflectors.

    PubMed

    Shi, G; Joines, W T

    2004-09-01

    The design and performance of annular antenna arrays with reflectors is presented. Arrays with three shapes of reflectors are analysed and simulated. These include the corner reflector, the circular reflector and the elliptical reflector. Power-density distributions within the annular arrays with and without reflectors are obtained by using the FDTD method. Also, the image theory method is used to verify the FDTD results in one case. By comparing the power-density distribution pattern of all four of the array designs (three with different reflectors, one without reflector), it is readily seen in each case that the array with reflectors yields better power-efficiency than the array without reflectors and the elliptical reflector yields the best performance. Comparisons of each array are made using 4, 6 and 8 antennae in the annular array. By using the optimized results of the elliptical reflector, the requirement for the input-power level to each antenna is greatly reduced. PMID:15370818

  19. Assessment of formulation robustness for nano-crystalline suspensions using failure mode analysis or derisking approach.

    PubMed

    Nakach, Mostafa; Authelin, Jean-René; Voignier, Cecile; Tadros, Tharwat; Galet, Laurence; Chamayou, Alain

    2016-06-15

    The small particle size of nano-crystalline suspensions can be responsible for their physical instability during drug product preparation (downstream processing), storage and administration. For that purpose, the commercial formulation needs to be sufficiently robust to various triggering conditions, such as ionic strength, shear rate, wetting/dispersing agent desorption by dilution, temperature and pH variation. In our previous work we described a systematic approach to select the suitable wetting/dispersant agent for the stabilization of nano-crystalline suspension. In this paper, we described the assessment of the formulation robustness (stabilized using a mixture of sodium dodecyl sulfate (SDS) and polyvinylpyrrolidone (PVP) and) by measuring the rate of perikinetic (diffusion-controlled) and orthokinetic (shear-induced) aggregation as a function of ionic strength, temperature, pH and dilution. The results showed that, using the SDS/PVP system, the critical coagulation concentration is about five times higher than that observed in the literature for suspension colloidaly stable at high concentration. The nano-suspension was also found to be very stable at ambient temperature and at different pH conditions. Desorption test confirmed the high affinity between API and wetting/dispersing agent. However, the suspension undergoes aggregation at high temperature due to the desorption of the wetting/dispersing agent and disaggregation of SDS micelles. Furthermore, aggregation occurs at very high shear rate (orhokinetic aggregation) by overcoming the energy barrier responsible for colloidal stability of the system. PMID:27102992

  20. Analysis of Wide-Band Signals Using Wavelet Array Processing

    NASA Astrophysics Data System (ADS)

    Nisii, V.; Saccorotti, G.

    2005-12-01

    Wavelets transforms allow for precise time-frequency localization in the analysis of non-stationary signals. In wavelet analysis the trade-off between frequency bandwidth and time duration, also known as Heisenberg inequality, is by-passed using a fully scalable modulated window which solves the signal-cutting problem of Windowed Fourier Transform. We propose a new seismic array data processing procedure capable of displaying the localized spatial coherence of the signal in both the time- and frequency-domain, in turn deriving the propagation parameters of the most coherent signals crossing the array. The procedure consists in: a) Wavelet coherence analysis for each station pair of the instruments array, aimed at retrieving the frequency- and time-localisation of coherent signals. To this purpose, we use the normalised wavelet cross- power spectrum, smoothed along the time and scale domains. We calculate different coherence spectra adopting smoothing windows of increasing lengths; a final, robust estimate of the time-frequency localisation of spatially-coherent signals is eventually retrieved from the stack of the individual coherence distribution. This step allows for a quick and reliable signal discrimination: wave groups propagating across the network will manifest as high-coherence patches spanning the corresponding time-scale region. b) Once the signals have been localised in the time and frequency domain,their propagation parameters are estimated using a modified MUSIC (MUltiple SIgnal Characterization) algorithm. We select the MUSIC approach as it demonstrated superior performances in the case of low SNR signals, more plane waves contemporaneously impinging at the array and closely separated sources. The narrow-band Coherent Signal Subspace technique is applied to the complex Continuous Wavelet Transform of multichannel data for improving the singularity of the estimated cross-covariance matrix and the accuracy of the estimated signal eigenvectors. Using

  1. Finite element analysis simulations for ultrasonic array NDE inspections

    NASA Astrophysics Data System (ADS)

    Dobson, Jeff; Tweedie, Andrew; Harvey, Gerald; O'Leary, Richard; Mulholland, Anthony; Tant, Katherine; Gachagan, Anthony

    2016-02-01

    Advances in manufacturing techniques and materials have led to an increase in the demand for reliable and robust inspection techniques to maintain safety critical features. The application of modelling methods to develop and evaluate inspections is becoming an essential tool for the NDE community. Current analytical methods are inadequate for simulation of arbitrary components and heterogeneous materials, such as anisotropic welds or composite structures. Finite element analysis software (FEA), such as PZFlex, can provide the ability to simulate the inspection of these arrangements, providing the ability to economically prototype and evaluate improved NDE methods. FEA is often seen as computationally expensive for ultrasound problems however, advances in computing power have made it a more viable tool. This paper aims to illustrate the capability of appropriate FEA to produce accurate simulations of ultrasonic array inspections - minimizing the requirement for expensive test-piece fabrication. Validation is afforded via corroboration of the FE derived and experimentally generated data sets for a test-block comprising 1D and 2D defects. The modelling approach is extended to consider the more troublesome aspects of heterogeneous materials where defect dimensions can be of the same length scale as the grain structure. The model is used to facilitate the implementation of new ultrasonic array inspection methods for such materials. This is exemplified by considering the simulation of ultrasonic NDE in a weld structure in order to assess new approaches to imaging such structures.

  2. Genopal™: A Novel Hollow Fibre Array for Focused Microarray Analysis

    PubMed Central

    Okuzaki, Daisuke; Fukushima, Tatsunobu; Tougan, Takahiro; Ishii, Tomonori; Kobayashi, Shigeto; Yoshizaki, Kazuyuki; Akita, Takashi; Nojima, Hiroshi

    2010-01-01

    Expression profiling of target genes in patient blood is a powerful tool for RNA diagnosis. Here, we describe Genopal™, a novel platform ideal for efficient focused microarray analysis. Genopal™, which consists of gel-filled fibres, is advantageous for high-quality mass production via large-scale slicing of the Genopal™ block. We prepared two arrays, infectant and autoimmunity, that provided highly reliable data in terms of repetitive scanning of the same and/or distinct microarrays. Moreover, we demonstrated that Genopal™ had sensitivity sufficient to yield signals in short hybridization times (0.5 h). Application of the autoimmunity array to blood samples allowed us to identify an expression pattern specific to Takayasu arteritis based on the Spearman rank correlation by comparing the reference profile with those of several autoimmune diseases and healthy volunteers (HVs). The comparison of these data with those obtained by other methods revealed that they exhibited similar expression profiles of many target genes. Taken together, these data demonstrate that Genopal™ is an advantageous platform for focused microarrays with regard to its low cost, rapid results and reliable quality. PMID:21059707

  3. SAVANT: Solar Array Verification and Analysis Tool Demonstrated

    NASA Technical Reports Server (NTRS)

    Chock, Ricaurte

    2000-01-01

    The photovoltaics (PV) industry is now being held to strict specifications, such as end-oflife power requirements, that force them to overengineer their products to avoid contractual penalties. Such overengineering has been the only reliable way to meet such specifications. Unfortunately, it also results in a more costly process than is probably necessary. In our conversations with the PV industry, the issue of cost has been raised again and again. Consequently, the Photovoltaics and Space Environment Effects branch at the NASA Glenn Research Center at Lewis Field has been developing a software tool to address this problem. SAVANT, Glenn's tool for solar array verification and analysis is in the technology demonstration phase. Ongoing work has proven that more efficient and less costly PV designs should be possible by using SAVANT to predict the on-orbit life-cycle performance. The ultimate goal of the SAVANT project is to provide a user-friendly computer tool to predict PV on-orbit life-cycle performance. This should greatly simplify the tasks of scaling and designing the PV power component of any given flight or mission. By being able to predict how a particular PV article will perform, designers will be able to balance mission power requirements (both beginning-of-life and end-of-life) with survivability concerns such as power degradation due to radiation and/or contamination. Recent comparisons with actual flight data from the Photovoltaic Array Space Power Plus Diagnostics (PASP Plus) mission validate this approach.

  4. Joint Analysis of BICEP2/Keck Array and Planck Data

    NASA Astrophysics Data System (ADS)

    BICEP2/Keck and Planck Collaborations; Ade, P. A. R.; Aghanim, N.; Ahmed, Z.; Aikin, R. W.; Alexander, K. D.; Arnaud, M.; Aumont, J.; Baccigalupi, C.; Banday, A. J.; Barkats, D.; Barreiro, R. B.; Bartlett, J. G.; Bartolo, N.; Battaner, E.; Benabed, K.; Benoît, A.; Benoit-Lévy, A.; Benton, S. J.; Bernard, J.-P.; Bersanelli, M.; Bielewicz, P.; Bischoff, C. A.; Bock, J. J.; Bonaldi, A.; Bonavera, L.; Bond, J. R.; Borrill, J.; Bouchet, F. R.; Boulanger, F.; Brevik, J. A.; Bucher, M.; Buder, I.; Bullock, E.; Burigana, C.; Butler, R. C.; Buza, V.; Calabrese, E.; Cardoso, J.-F.; Catalano, A.; Challinor, A.; Chary, R.-R.; Chiang, H. C.; Christensen, P. R.; Colombo, L. P. L.; Combet, C.; Connors, J.; Couchot, F.; Coulais, A.; Crill, B. P.; Curto, A.; Cuttaia, F.; Danese, L.; Davies, R. D.; Davis, R. J.; de Bernardis, P.; De Rosa, A.; de Zotti, G.; Delabrouille, J.; Delouis, J.-M.; Désert, F.-X.; Dickinson, C.; Diego, J. M.; Dole, H.; Donzelli, S.; Doré, O.; Douspis, M.; Dowell, C. D.; Duband, L.; Ducout, A.; Dunkley, J.; Dupac, X.; Dvorkin, C.; Efstathiou, G.; Elsner, F.; Enßlin, T. A.; Eriksen, H. K.; Falgarone, E.; Filippini, J. P.; Finelli, F.; Fliescher, S.; Forni, O.; Frailis, M.; Fraisse, A. A.; Franceschi, E.; Frejsel, A.; Galeotta, S.; Galli, S.; Ganga, K.; Ghosh, T.; Giard, M.; Gjerløw, E.; Golwala, S. R.; González-Nuevo, J.; Górski, K. M.; Gratton, S.; Gregorio, A.; Gruppuso, A.; Gudmundsson, J. E.; Halpern, M.; Hansen, F. K.; Hanson, D.; Harrison, D. L.; Hasselfield, M.; Helou, G.; Henrot-Versillé, S.; Herranz, D.; Hildebrandt, S. R.; Hilton, G. C.; Hivon, E.; Hobson, M.; Holmes, W. A.; Hovest, W.; Hristov, V. V.; Huffenberger, K. M.; Hui, H.; Hurier, G.; Irwin, K. D.; Jaffe, A. H.; Jaffe, T. R.; Jewell, J.; Jones, W. C.; Juvela, M.; Karakci, A.; Karkare, K. S.; Kaufman, J. P.; Keating, B. G.; Kefeli, S.; Keihänen, E.; Kernasovskiy, S. A.; Keskitalo, R.; Kisner, T. S.; Kneissl, R.; Knoche, J.; Knox, L.; Kovac, J. M.; Krachmalnicoff, N.; Kunz, M.; Kuo, C. L.; Kurki-Suonio, H.; Lagache, G.; Lähteenmäki, A.; Lamarre, J.-M.; Lasenby, A.; Lattanzi, M.; Lawrence, C. R.; Leitch, E. M.; Leonardi, R.; Levrier, F.; Lewis, A.; Liguori, M.; Lilje, P. B.; Linden-Vørnle, M.; López-Caniego, M.; Lubin, P. M.; Lueker, M.; Macías-Pérez, J. F.; Maffei, B.; Maino, D.; Mandolesi, N.; Mangilli, A.; Maris, M.; Martin, P. G.; Martínez-González, E.; Masi, S.; Mason, P.; Matarrese, S.; Megerian, K. G.; Meinhold, P. R.; Melchiorri, A.; Mendes, L.; Mennella, A.; Migliaccio, M.; Mitra, S.; Miville-Deschênes, M.-A.; Moneti, A.; Montier, L.; Morgante, G.; Mortlock, D.; Moss, A.; Munshi, D.; Murphy, J. A.; Naselsky, P.; Nati, F.; Natoli, P.; Netterfield, C. B.; Nguyen, H. T.; Nørgaard-Nielsen, H. U.; Noviello, F.; Novikov, D.; Novikov, I.; O'Brient, R.; Ogburn, R. W.; Orlando, A.; Pagano, L.; Pajot, F.; Paladini, R.; Paoletti, D.; Partridge, B.; Pasian, F.; Patanchon, G.; Pearson, T. J.; Perdereau, O.; Perotto, L.; Pettorino, V.; Piacentini, F.; Piat, M.; Pietrobon, D.; Plaszczynski, S.; Pointecouteau, E.; Polenta, G.; Ponthieu, N.; Pratt, G. W.; Prunet, S.; Pryke, C.; Puget, J.-L.; Rachen, J. P.; Reach, W. T.; Rebolo, R.; Reinecke, M.; Remazeilles, M.; Renault, C.; Renzi, A.; Richter, S.; Ristorcelli, I.; Rocha, G.; Rossetti, M.; Roudier, G.; Rowan-Robinson, M.; Rubiño-Martín, J. A.; Rusholme, B.; Sandri, M.; Santos, D.; Savelainen, M.; Savini, G.; Schwarz, R.; Scott, D.; Seiffert, M. D.; Sheehy, C. D.; Spencer, L. D.; Staniszewski, Z. K.; Stolyarov, V.; Sudiwala, R.; Sunyaev, R.; Sutton, D.; Suur-Uski, A.-S.; Sygnet, J.-F.; Tauber, J. A.; Teply, G. P.; Terenzi, L.; Thompson, K. L.; Toffolatti, L.; Tolan, J. E.; Tomasi, M.; Tristram, M.; Tucci, M.; Turner, A. D.; Valenziano, L.; Valiviita, J.; van Tent, B.; Vibert, L.; Vielva, P.; Vieregg, A. G.; Villa, F.; Wade, L. A.; Wandelt, B. D.; Watson, R.; Weber, A. C.; Wehus, I. K.; White, M.; White, S. D. M.; Willmert, J.; Wong, C. L.; Yoon, K. W.; Yvon, D.; Zacchei, A.; Zonca, A.; Bicep2/Keck; Planck Collaborations

    2015-03-01

    We report the results of a joint analysis of data from BICEP2/Keck Array and Planck. BICEP2 and Keck Array have observed the same approximately 400 deg2 patch of sky centered on RA 0 h, Dec. -57.5 ° . The combined maps reach a depth of 57 nK deg in Stokes Q and U in a band centered at 150 GHz. Planck has observed the full sky in polarization at seven frequencies from 30 to 353 GHz, but much less deeply in any given region (1.2 μ K deg in Q and U at 143 GHz). We detect 150 ×353 cross-correlation in B modes at high significance. We fit the single- and cross-frequency power spectra at frequencies ≥150 GHz to a lensed-Λ CDM model that includes dust and a possible contribution from inflationary gravitational waves (as parametrized by the tensor-to-scalar ratio r), using a prior on the frequency spectral behavior of polarized dust emission from previous Planck analysis of other regions of the sky. We find strong evidence for dust and no statistically significant evidence for tensor modes. We probe various model variations and extensions, including adding a synchrotron component in combination with lower frequency data, and find that these make little difference to the r constraint. Finally, we present an alternative analysis which is similar to a map-based cleaning of the dust contribution, and show that this gives similar constraints. The final result is expressed as a likelihood curve for r, and yields an upper limit r0.05<0.12 at 95% confidence. Marginalizing over dust and r, lensing B modes are detected at 7.0 σ significance.

  5. Joint analysis of BICEP2/keck array and Planck Data.

    PubMed

    Ade, P A R; Aghanim, N; Ahmed, Z; Aikin, R W; Alexander, K D; Arnaud, M; Aumont, J; Baccigalupi, C; Banday, A J; Barkats, D; Barreiro, R B; Bartlett, J G; Bartolo, N; Battaner, E; Benabed, K; Benoît, A; Benoit-Lévy, A; Benton, S J; Bernard, J-P; Bersanelli, M; Bielewicz, P; Bischoff, C A; Bock, J J; Bonaldi, A; Bonavera, L; Bond, J R; Borrill, J; Bouchet, F R; Boulanger, F; Brevik, J A; Bucher, M; Buder, I; Bullock, E; Burigana, C; Butler, R C; Buza, V; Calabrese, E; Cardoso, J-F; Catalano, A; Challinor, A; Chary, R-R; Chiang, H C; Christensen, P R; Colombo, L P L; Combet, C; Connors, J; Couchot, F; Coulais, A; Crill, B P; Curto, A; Cuttaia, F; Danese, L; Davies, R D; Davis, R J; de Bernardis, P; de Rosa, A; de Zotti, G; Delabrouille, J; Delouis, J-M; Désert, F-X; Dickinson, C; Diego, J M; Dole, H; Donzelli, S; Doré, O; Douspis, M; Dowell, C D; Duband, L; Ducout, A; Dunkley, J; Dupac, X; Dvorkin, C; Efstathiou, G; Elsner, F; Enßlin, T A; Eriksen, H K; Falgarone, E; Filippini, J P; Finelli, F; Fliescher, S; Forni, O; Frailis, M; Fraisse, A A; Franceschi, E; Frejsel, A; Galeotta, S; Galli, S; Ganga, K; Ghosh, T; Giard, M; Gjerløw, E; Golwala, S R; González-Nuevo, J; Górski, K M; Gratton, S; Gregorio, A; Gruppuso, A; Gudmundsson, J E; Halpern, M; Hansen, F K; Hanson, D; Harrison, D L; Hasselfield, M; Helou, G; Henrot-Versillé, S; Herranz, D; Hildebrandt, S R; Hilton, G C; Hivon, E; Hobson, M; Holmes, W A; Hovest, W; Hristov, V V; Huffenberger, K M; Hui, H; Hurier, G; Irwin, K D; Jaffe, A H; Jaffe, T R; Jewell, J; Jones, W C; Juvela, M; Karakci, A; Karkare, K S; Kaufman, J P; Keating, B G; Kefeli, S; Keihänen, E; Kernasovskiy, S A; Keskitalo, R; Kisner, T S; Kneissl, R; Knoche, J; Knox, L; Kovac, J M; Krachmalnicoff, N; Kunz, M; Kuo, C L; Kurki-Suonio, H; Lagache, G; Lähteenmäki, A; Lamarre, J-M; Lasenby, A; Lattanzi, M; Lawrence, C R; Leitch, E M; Leonardi, R; Levrier, F; Lewis, A; Liguori, M; Lilje, P B; Linden-Vørnle, M; López-Caniego, M; Lubin, P M; Lueker, M; Macías-Pérez, J F; Maffei, B; Maino, D; Mandolesi, N; Mangilli, A; Maris, M; Martin, P G; Martínez-González, E; Masi, S; Mason, P; Matarrese, S; Megerian, K G; Meinhold, P R; Melchiorri, A; Mendes, L; Mennella, A; Migliaccio, M; Mitra, S; Miville-Deschênes, M-A; Moneti, A; Montier, L; Morgante, G; Mortlock, D; Moss, A; Munshi, D; Murphy, J A; Naselsky, P; Nati, F; Natoli, P; Netterfield, C B; Nguyen, H T; Nørgaard-Nielsen, H U; Noviello, F; Novikov, D; Novikov, I; O'Brient, R; Ogburn, R W; Orlando, A; Pagano, L; Pajot, F; Paladini, R; Paoletti, D; Partridge, B; Pasian, F; Patanchon, G; Pearson, T J; Perdereau, O; Perotto, L; Pettorino, V; Piacentini, F; Piat, M; Pietrobon, D; Plaszczynski, S; Pointecouteau, E; Polenta, G; Ponthieu, N; Pratt, G W; Prunet, S; Pryke, C; Puget, J-L; Rachen, J P; Reach, W T; Rebolo, R; Reinecke, M; Remazeilles, M; Renault, C; Renzi, A; Richter, S; Ristorcelli, I; Rocha, G; Rossetti, M; Roudier, G; Rowan-Robinson, M; Rubiño-Martín, J A; Rusholme, B; Sandri, M; Santos, D; Savelainen, M; Savini, G; Schwarz, R; Scott, D; Seiffert, M D; Sheehy, C D; Spencer, L D; Staniszewski, Z K; Stolyarov, V; Sudiwala, R; Sunyaev, R; Sutton, D; Suur-Uski, A-S; Sygnet, J-F; Tauber, J A; Teply, G P; Terenzi, L; Thompson, K L; Toffolatti, L; Tolan, J E; Tomasi, M; Tristram, M; Tucci, M; Turner, A D; Valenziano, L; Valiviita, J; Van Tent, B; Vibert, L; Vielva, P; Vieregg, A G; Villa, F; Wade, L A; Wandelt, B D; Watson, R; Weber, A C; Wehus, I K; White, M; White, S D M; Willmert, J; Wong, C L; Yoon, K W; Yvon, D; Zacchei, A; Zonca, A

    2015-03-13

    We report the results of a joint analysis of data from BICEP2/Keck Array and Planck. BICEP2 and Keck Array have observed the same approximately 400  deg^{2} patch of sky centered on RA 0 h, Dec. -57.5°. The combined maps reach a depth of 57 nK deg in Stokes Q and U in a band centered at 150 GHz. Planck has observed the full sky in polarization at seven frequencies from 30 to 353 GHz, but much less deeply in any given region (1.2  μK deg in Q and U at 143 GHz). We detect 150×353 cross-correlation in B modes at high significance. We fit the single- and cross-frequency power spectra at frequencies ≥150  GHz to a lensed-ΛCDM model that includes dust and a possible contribution from inflationary gravitational waves (as parametrized by the tensor-to-scalar ratio r), using a prior on the frequency spectral behavior of polarized dust emission from previous Planck analysis of other regions of the sky. We find strong evidence for dust and no statistically significant evidence for tensor modes. We probe various model variations and extensions, including adding a synchrotron component in combination with lower frequency data, and find that these make little difference to the r constraint. Finally, we present an alternative analysis which is similar to a map-based cleaning of the dust contribution, and show that this gives similar constraints. The final result is expressed as a likelihood curve for r, and yields an upper limit r_{0.05}<0.12 at 95% confidence. Marginalizing over dust and r, lensing B modes are detected at 7.0σ significance. PMID:25815919

  6. Rate equations analysis of phase-locked semiconductor laser arrays under steady state conditions

    NASA Technical Reports Server (NTRS)

    Katz, J.; Kapon, E.; Margalit, S.; Yariv, A.

    1984-01-01

    Rate equations analysis of phase-locked semiconductor laser arrays has been carried out. It was found that for given (laser) current densities, the photon density distribution in the array elements is that particular one which maximizes the total photon density. The results of this analysis were then combined with the waveguide properties of the laser array waveguide, yielding a basic model of phase-locked diode laser arrays. This model explains the effects of the variation of the current combination through the array elements on its mode structure that were observed recently.

  7. Supermode analysis of phase-locked arrays of semiconductor lasers

    NASA Technical Reports Server (NTRS)

    Kapon, E.; Yariv, A.; Katz, J.

    1984-01-01

    The optical characteristics of phase-locked semiconductor laser arrays are formulated in terms of the array supermodes, which are the eigenmodes of the composite-array waveguide, by using coupled-mode theory. These supermodes are employed to calculate the near fields, the far fields, and the difference in the longitudinal-mode oscillation wavelengths of the array. It is shown that the broadening in the far-field beam divergence, as well as the broadening of each of the longitudinal modes that were observed in phase-locked arrays, may arise from the excitation of an increasing number of supermodes at increasing pumping levels.

  8. The Murchison Widefield Array 21 cm Power Spectrum Analysis Methodology

    NASA Astrophysics Data System (ADS)

    Jacobs, Daniel C.; Hazelton, B. J.; Trott, C. M.; Dillon, Joshua S.; Pindor, B.; Sullivan, I. S.; Pober, J. C.; Barry, N.; Beardsley, A. P.; Bernardi, G.; Bowman, Judd D.; Briggs, F.; Cappallo, R. J.; Carroll, P.; Corey, B. E.; de Oliveira-Costa, A.; Emrich, D.; Ewall-Wice, A.; Feng, L.; Gaensler, B. M.; Goeke, R.; Greenhill, L. J.; Hewitt, J. N.; Hurley-Walker, N.; Johnston-Hollitt, M.; Kaplan, D. L.; Kasper, J. C.; Kim, HS; Kratzenberg, E.; Lenc, E.; Line, J.; Loeb, A.; Lonsdale, C. J.; Lynch, M. J.; McKinley, B.; McWhirter, S. R.; Mitchell, D. A.; Morales, M. F.; Morgan, E.; Neben, A. R.; Thyagarajan, N.; Oberoi, D.; Offringa, A. R.; Ord, S. M.; Paul, S.; Prabu, T.; Procopio, P.; Riding, J.; Rogers, A. E. E.; Roshi, A.; Udaya Shankar, N.; Sethi, Shiv K.; Srivani, K. S.; Subrahmanyan, R.; Tegmark, M.; Tingay, S. J.; Waterson, M.; Wayth, R. B.; Webster, R. L.; Whitney, A. R.; Williams, A.; Williams, C. L.; Wu, C.; Wyithe, J. S. B.

    2016-07-01

    We present the 21 cm power spectrum analysis approach of the Murchison Widefield Array Epoch of Reionization project. In this paper, we compare the outputs of multiple pipelines for the purpose of validating statistical limits cosmological hydrogen at redshifts between 6 and 12. Multiple independent data calibration and reduction pipelines are used to make power spectrum limits on a fiducial night of data. Comparing the outputs of imaging and power spectrum stages highlights differences in calibration, foreground subtraction, and power spectrum calculation. The power spectra found using these different methods span a space defined by the various tradeoffs between speed, accuracy, and systematic control. Lessons learned from comparing the pipelines range from the algorithmic to the prosaically mundane; all demonstrate the many pitfalls of neglecting reproducibility. We briefly discuss the way these different methods attempt to handle the question of evaluating a significant detection in the presence of foregrounds.

  9. Geometric nonlinear analysis of self-anchored cable-stayed suspension bridges.

    PubMed

    Hui-Li, Wang; Yan-Bin, Tan; Si-Feng, Qin; Zhe, Zhang

    2013-01-01

    Geometric nonlinearity of self-anchored cable-stayed suspension bridges is studied in this paper. The repercussion of shrinkage and creep of concrete, rise-to-span ratio, and girder camber on the system is discussed. A self-anchored cable-stayed suspension bridge with a main span of 800 m is analyzed with linear theory, second-order theory, and nonlinear theory, respectively. In the condition of various rise-to-span ratios and girder cambers, the moments and displacements of both the girder and the pylon under live load are acquired. Based on the results it is derived that the second-order theory can be adopted to analyze a self-anchored cable-stayed suspension bridge with a main span of 800 m, and the error is less than 6%. The shrinkage and creep of concrete impose a conspicuous impact on the structure. And it outmatches suspension bridges for system stiffness. As the rise-to-span ratio increases, the axial forces of the main cable and the girder decline. The system stiffness rises with the girder camber being employed. PMID:24282388

  10. Geometric Nonlinear Analysis of Self-Anchored Cable-Stayed Suspension Bridges

    PubMed Central

    Hui-Li, Wang; Yan-Bin, Tan; Si-Feng, Qin; Zhe, Zhang

    2013-01-01

    Geometric nonlinearity of self-anchored cable-stayed suspension bridges is studied in this paper. The repercussion of shrinkage and creep of concrete, rise-to-span ratio, and girder camber on the system is discussed. A self-anchored cable-stayed suspension bridge with a main span of 800 m is analyzed with linear theory, second-order theory, and nonlinear theory, respectively. In the condition of various rise-to-span ratios and girder cambers, the moments and displacements of both the girder and the pylon under live load are acquired. Based on the results it is derived that the second-order theory can be adopted to analyze a self-anchored cable-stayed suspension bridge with a main span of 800 m, and the error is less than 6%. The shrinkage and creep of concrete impose a conspicuous impact on the structure. And it outmatches suspension bridges for system stiffness. As the rise-to-span ratio increases, the axial forces of the main cable and the girder decline. The system stiffness rises with the girder camber being employed. PMID:24282388

  11. High-throughput analysis and protein engineering using microcapillary arrays.

    PubMed

    Chen, Bob; Lim, Sungwon; Kannan, Arvind; Alford, Spencer C; Sunden, Fanny; Herschlag, Daniel; Dimov, Ivan K; Baer, Thomas M; Cochran, Jennifer R

    2016-02-01

    We describe a multipurpose technology platform, termed μSCALE (microcapillary single-cell analysis and laser extraction), that enables massively parallel, quantitative biochemical and biophysical measurements on millions of protein variants expressed from yeast or bacteria. μSCALE spatially segregates single cells within a microcapillary array, enabling repeated imaging, cell growth and protein expression. We performed high-throughput analysis of cells and their protein products using a range of fluorescent assays, including binding-affinity measurements and dynamic enzymatic assays. A precise laser-based extraction method allows rapid recovery of live clones and their genetic material from microcapillaries for further study. With μSCALE, we discovered a new antibody against a clinical cancer target, evolved a fluorescent protein biosensor and engineered an enzyme to reduce its sensitivity to its inhibitor. These protein analysis and engineering applications each have unique assay requirements and different host organisms, highlighting the flexibility and technical capabilities of the μSCALE platform. PMID:26641932

  12. Water desorption of cassava starch granules: A study based on thermogravimetric analysis of aqueous suspensions and humid powders.

    PubMed

    Ayala Valencia, Germán; Djabourov, Madeleine; do Amaral Sobral, Paulo José

    2016-08-20

    This work reports on water desorption from cassava starch in relation with the structure and conditioning of granules in suspensions or after equilibration in desiccators. The experimental work is performed by thermogravimetric analysis with isothermal and non-isothermal protocols and interpreted to derive the activation energies and desorption frequencies according to the humidity range with no adjustable parameter. The analysis points out the different types of water interacting with the starch granules and relates the drying coefficients to their microscopic structure. The work helps clarifying contradictory and partial results from the literature. PMID:27178961

  13. GEO Satellite Solar Array Abnormality's Analysis and Treatment

    NASA Astrophysics Data System (ADS)

    Wang, Junyan; Yang, Yujie; Zhu, Weibo; Liu, Jingyong; Xu, Hui

    Solar array, converting sunlight into electricity, is one of the most important components in satellite energy subsystem. It is significant for in-orbit satellite safety that solar array and its subsidiaries work normally. An abnormal phenomenon that the output current of one solar array suddenly decreased happened in a GEO satellite. Combined with the structure of the solar array system and the trends of relevant parameters during the abnormality, the paper analyzed the possible reasons, and detected the root cause, and finally provided an emergency treatment for this kind of abnormality.

  14. Seismic Background Noise Analysis of BRTR (PS-43) Array

    NASA Astrophysics Data System (ADS)

    Ezgi Bakir, Mahmure; Meral Ozel, Nurcan; Umut Semin, Korhan

    2015-04-01

    The seismic background noise variation of BRTR array, composed of two sub arrays located in Ankara and in Ankara-Keskin, has been investigated by calculating Power Spectral Density and Probability Density Functions for seasonal and diurnal noise variations between 2005 and 2011. PSDs were computed within the frequency range of 100 s - 10 Hz. The results show us a little change in noise conditions in terms of time and location. Especially, noise level changes were observed at 3-5 Hz in diurnal variations at Keskin array and there is a 5-7 dB difference in day and night time in cultural noise band (1-10 Hz). On the other hand, noise levels of medium period array is high in 1-2 Hz frequency rather than short period array. High noise levels were observed in daily working times when we compare it to night-time in cultural noise band. The seasonal background noise variation at both sites also shows very similar properties to each other. Since these stations are borehole instruments and away from the coasts, we saw a small change in noise levels caused by microseism. Comparison between Keskin short period array and Ankara medium period array show us Keskin array is quiter than Ankara array.

  15. Peptide Arrays for Kinome Analysis of Livestock Species

    PubMed Central

    Daigle, Joanna; Van Wyk, Brenden; Trost, Brett; Scruten, Erin; Arsenault, Ryan; Kusalik, Anthony; Griebel, Philip John; Napper, Scott

    2014-01-01

    Reversible protein phosphorylation is a central mechanism for both the transfer of intracellular information and the initiation of cellular responses. Within human medicine, considerable emphasis is placed on understanding and controlling the enzymes (kinases) that are responsible for catalyzing these modifications. This is evident in the prominent use of kinase inhibitors as drugs as well as the trend to understand complex biology and identify biomarkers via characterizations of global kinase (kinome) activity. Despite the demonstrated value of focusing on kinome activity, the application of this perspective to livestock has been restricted by the absence of appropriate research tools. In this review, we discuss the development of software platforms that facilitate the development and application of species-specific peptide arrays for kinome analysis of livestock. Examples of the application of kinomic approaches to a number of priority species (cattle, pigs, and chickens) in a number of biological contexts (infections, biomarker discovery, and food quality) are presented as are emerging trends for kinome analysis of livestock. PMID:26664912

  16. Peptide Arrays for Kinome Analysis of Livestock Species.

    PubMed

    Daigle, Joanna; Van Wyk, Brenden; Trost, Brett; Scruten, Erin; Arsenault, Ryan; Kusalik, Anthony; Griebel, Philip John; Napper, Scott

    2014-01-01

    Reversible protein phosphorylation is a central mechanism for both the transfer of intracellular information and the initiation of cellular responses. Within human medicine, considerable emphasis is placed on understanding and controlling the enzymes (kinases) that are responsible for catalyzing these modifications. This is evident in the prominent use of kinase inhibitors as drugs as well as the trend to understand complex biology and identify biomarkers via characterizations of global kinase (kinome) activity. Despite the demonstrated value of focusing on kinome activity, the application of this perspective to livestock has been restricted by the absence of appropriate research tools. In this review, we discuss the development of software platforms that facilitate the development and application of species-specific peptide arrays for kinome analysis of livestock. Examples of the application of kinomic approaches to a number of priority species (cattle, pigs, and chickens) in a number of biological contexts (infections, biomarker discovery, and food quality) are presented as are emerging trends for kinome analysis of livestock. PMID:26664912

  17. Preparation of Single-cell Suspensions for Cytofluorimetric Analysis from Different Mouse Skin Regions.

    PubMed

    Broggi, Achille; Cigni, Clara; Zanoni, Ivan; Granucci, Francesca

    2016-01-01

    The skin is a barrier organ that interacts with the external environment. Being continuously exposed to potential microbial invasion, the dermis and epidermis home a variety of immune cells in both homeostatic and inflammatory conditions. Tools to obtain skin cell release for cytofluorimetric analyses are, therefore, very useful in order to study the complex network of immune cells residing in the skin and their response to microbial stimuli. Here, we describe an efficient methodology for the digestion of mouse skin to rapidly and efficiently obtain single-cell suspensions. This protocol allows maintenance of maximum cell viability without compromising surface antigen expression. We also describe how to take and digest skin samples from different anatomical locations, such as the ear, trunk, tail, and footpad. The obtained suspensions are then stained and analyzed by flow cytometry to discriminate between different leukocyte populations. PMID:27166881

  18. Terrestrial central station array life-cycle analysis support study

    NASA Technical Reports Server (NTRS)

    1978-01-01

    Plant elements evaluated included designs for module, panel and array structures, as well as balance-of-plant systems. Installation and maintenance procedures and the impact of site environment were also evaluated. In terms of the cost of energy produced, the horizontal array configuration was found to be less expensive than the tandem array at latitudes less than 40 deg. Both of these configurations are less expensive than the rack design. However, the costs of energy for all three configurations are within approximately ?10 percent of each other. For flat plate panels, the seasonally adjusted and tracking array configurations are not economically attractive when compared to the three other designs. Balance-of-plant costs are approximately equal to (goal) module costs. The array structures and foundations are the most expensive items in the balance-of-plant costs.

  19. Random vibrations of quadratic damping systems. [optimum damping analysis for automobile suspension system

    NASA Technical Reports Server (NTRS)

    Sireteanu, T.

    1974-01-01

    An oscillating system with quadratic damping subjected to white noise excitation is replaced by a nonlinear, statistically equivalent system for which the associated Fokker-Planck equation can be exactly solved. The mean square responses are calculated and the optimum damping coefficient is determined with respect to the minimum mean square acceleration criteria. An application of these results to the optimization of automobile suspension damping is given.

  20. Design and analysis of a shock absorber with variable moment of inertia for passive vehicle suspensions

    NASA Astrophysics Data System (ADS)

    Xu, Tongyi; Liang, Ming; Li, Chuan; Yang, Shuai

    2015-10-01

    A two-terminal mass (TTM) based vibration absorber with variable moment of inertia (VMI) for passive vehicle suspension is proposed. The VMI of the system is achieved by the motion of sliders embedded in a hydraulic driven flywheel. The moment of inertia increases in reaction to strong vertical vehicle oscillations and decreases for weak vertical oscillations. The hydraulic mechanism of the system converts the relative linear motion between the two terminals of the suspension into rotating motion of the flywheel. In the case of stronger vehicle vertical oscillation, the sliders inside the flywheel move away from the center of the flywheel because of the centrifugal force, hence yielding higher moment of inertia. The opposite is true in the case of weaker vehicle oscillation. As such, the moment of inertia adjusts itself adaptively in response to the road conditions. The performance of the proposed TTM-VMI absorber has been analyzed via dynamics modeling and simulation and further examined by experiments. In comparison to its counterpart with constant moment of inertia, the proposed VMI system offers faster response, better road handling and safety, improved ride comfort, and reduced suspension deflection except in the case of sinusoidal excitations.

  1. Analysis of backwashing efficiency in dead-end hollow-fibre ultrafiltration of anaerobic suspensions.

    PubMed

    Vera, Luisa; González, Enrique; Ruigómez, Ignacio; Gómez, Jenniffer; Delgado, Sebastián

    2015-11-01

    A novel dead-end mode operation for filtering anaerobic suspensions was investigated. In this mode, the filtration system automatically adjusted backwashing frequency to a preselected transmembrane pressure set-point. This paper discusses the effectiveness of the backwashing conditions on membrane fouling. Anaerobic suspensions from a conventional wastewater treatment plant digester were used as model suspensions for the trials carried out at lab-scale. Gas sparging aided backwashing significantly enhanced membrane cleaning efficiency. No effect of gas sparging on internal fouling was detected. Also, the cleaning efficiency linearly decreased with permeate flux. Nevertheless, due to a high increase in the reversible fouling, a reasonable net permeate flux (7.2-6.8 L/h m(2)) can be achieved when intermediate fluxes (12-16 L/h m(2)) were imposed and the higher transmembrane pressure set-point value (50 kPa) was applied. Both backwashing duration and flux exhibited similar influence on cake fouling removal for a given volume of permeate produced. PMID:26081780

  2. Design and Analysis of the Warm-To Suspension Links for Jefferson Lab's 11 Gev/c Super High Momentum Spectrometer

    NASA Astrophysics Data System (ADS)

    Sun, E.; Brindza, P.; Lassiter, S.; Fowler, M.

    2010-04-01

    This paper describes design and analysis performed for the warm-to-cold suspension links of the warm iron yoke superconducting quadrupole magnets, and superconducting dipole magnet. The results of investigation of titanium Ti-6Al-4V and Nitronic 50 stainless steel for the suspension links to support the cold mass, preloads, forces due to cryogenic temperature, and imbalanced magnetic forces from misalignments are presented. Allowable stresses at normal-case scenarios and worst-case scenarios, space constraints, and heat leak considerations are discussed. Principles of the ASME Pressure Vessel Code were used to determine allowable stresses. Optimal angles of the suspension links were obtained by calculation and finite element methods. The stress levels of suspension links at multiple scenarios are presented, discussed, and compared with the allowable stresses.

  3. Reliability analysis of the solar array based on Fault Tree Analysis

    NASA Astrophysics Data System (ADS)

    Jianing, Wu; Shaoze, Yan

    2011-07-01

    The solar array is an important device used in the spacecraft, which influences the quality of in-orbit operation of the spacecraft and even the launches. This paper analyzes the reliability of the mechanical system and certifies the most vital subsystem of the solar array. The fault tree analysis (FTA) model is established according to the operating process of the mechanical system based on DFH-3 satellite; the logical expression of the top event is obtained by Boolean algebra and the reliability of the solar array is calculated. The conclusion shows that the hinges are the most vital links between the solar arrays. By analyzing the structure importance(SI) of the hinge's FTA model, some fatal causes, including faults of the seal, insufficient torque of the locking spring, temperature in space, and friction force, can be identified. Damage is the initial stage of the fault, so limiting damage is significant to prevent faults. Furthermore, recommendations for improving reliability associated with damage limitation are discussed, which can be used for the redesigning of the solar array and the reliability growth planning.

  4. Device, array, and methods for disease detection and analysis

    DOEpatents

    Rao, Rupa S.; Lane, Stephen M.; Matthews, Dennis L.; Coleman, Matthew A.

    2016-06-14

    A device and array coupled to capture molecules are provided. Specifically, the device and array can be used for detecting the presence and concentration of biomarkers in a sample from a subject. The device and array can also allow the use of a method for scoring a sample for, e.g., the purpose of diagnosing a disease. The method can also be advantageous to applications where there is a need to accurately determine the disease stage of a subject for the purpose of making therapeutic decisions.

  5. Surface-induced lamellar orientation of multilayer membrane arrays. Theoretical analysis and a new method with application to purple membrane fragments.

    PubMed Central

    Clark, N A; Rothschild, K J; Luippold, D A; Simon, B A

    1980-01-01

    The orientation of membrane fragments into a lamellar array by a flat surface is analyzed. This analysis includes processes such as centrifugation and drying and physical effects due to membrane fragment steric interactions, finite size, elasticity, and thermal fluctuations. Several model calculations of optimal orientational order in multilayer membrane arrays are presented. The predictions of a smectic A model agree quantitatively with the measured spatial dependence of the fluctuations in layer orientation in a multilamellar arrays. A new technique, based in part on this analysis, for the preparation of well-oriented multilamellar arrays of natural and artificial membranes, isopotential spin-dry centrifugation, is described. The method involves the use of specially designed inserts for the buckets of a standard vacuum ultracentrifuge. The membrane fragments to be oriented are sedimented from solution or suspension onto a substrate of a convenient material which forms a gravitational isopotential surface at high g. Sedimentation is accompanied by removal of the suspending medium at high g to produce oriented films with a selected degree of solvation. In addition, a method is described whereby small solute molecules can be maintained in constant concentration with the membrane fragments during this process. Initial application of the method to the orientation of purple membrane fragments is described. The degree of orientation obtained in this system is evaluated using freeze-fracture and scanning electron microscopy, optical birefringence, linear dichroism, and microscopy. Images FIGURE 9 FIGURE 10 FIGURE 12 FIGURE 15 PMID:7272434

  6. Analysis of variable-thickness, streamlined transducer array windowing concepts for high speed underwater vehicles

    NASA Astrophysics Data System (ADS)

    Koch, Robert M.

    2002-11-01

    Recent research in very high speed underwater vehicles shows they require a much more streamlined vehicle nose than the present rather flat tactical scale vehicle nose. It has been found that the common forward-facing transducer array with a constant thickness array window utilized on current lower speed vehicles is inadequate. Two newer alternate front-end array concepts suitable for lower drag, higher speed vehicles being investigated are (a) a variable thickness, streamlined array window on a flat forward facing array and (b) a streamlined vehicle nose structure consisting of a built-in distributed, conformal array. While these highly streamlined concepts are attractive from the standpoint of reducing vehicle drag at higher speeds, both require reexamination of the effects of high curvature on front-end sonar array performance. In the present paper, both above streamlined array concepts are numerically examined using the sara2d dynamic structural-acoustic Finite Element Analysis (FEA) code. First, the acoustic performance of a hemispherical array window is compared to a common equal aperture flat window in both transmit (outgoing acoustic wave) and receive (incident acoustic wave) modes. Second, a dynamic simulation of acoustic array beam-forming and beam-steering is performed for a conical shaped conformal array to assess the feasibility of the concept.

  7. Faster Array Training and Rapid Analysis for a Sensor Array Intended for an Event Monitor in Air

    NASA Technical Reports Server (NTRS)

    Homer, Margie L.; Shevade, A. V.; Fonollosa, J.; Huerta, R.

    2013-01-01

    Environmental monitoring, in particular, air monitoring, is a critical need for human space flight. Both monitoring and life support systems have needs for closed loop process feedback and quality control for environmental factors. Monitoring protects the air environment and water supply for the astronaut crew and different sensors help ensure that the habitat falls within acceptable limits, and that the life support system is functioning properly and efficiently. The longer the flight duration and the farther the destination, the more critical it becomes to have carefully monitored and automated control systems for life support. There is an acknowledged need for an event monitor which samples the air continuously and provides near real-time information on changes in the air. Past experiments with the JPL ENose have demonstrated a lifetime of the sensor array, with the software, of around 18 months. We are working on a sensor array and new algorithms that will incorporate transient sensor responses in the analysis. Preliminary work has already showed more rapid quantification and identification of analytes and the potential for faster training time of the array. We will look at some of the factors that contribute to demonstrating faster training time for the array. Faster training will decrease the integrated sensor exposure to training analytes, which will also help extend sensor lifetime.

  8. Biomedical analysis of rat body hair after hindlimb suspension for 14 days

    NASA Astrophysics Data System (ADS)

    Terada, Masahiro; Kawano, Fuminori; Ishioka, Noriaki; Higashibata, Akira; Majima, Hideyuki J.; Yamazaki, Takashi; Watanabe-Asaka, Tomomi; Niihori, Maki; Nakao, Reiko; Yamada, Shin; Mukai, Chiaki; Ohira, Yoshinobu

    2012-04-01

    The levels of 26 minerals in rat body hair were analyzed in control and hindlimb-suspended Wistar Hannover rats (n=5 each). We quantified the levels of 22 minerals in this experiment. However, we were unable to measure the levels of 4 minerals (Be, V, Cd, and Hg) quantitatively because they were below the limit of detection. Of the 22 quantified, the levels of 19 minerals were not significantly different between control and hindlimb-suspended groups. The levels of 3 minerals (Pb, Cr, and Al) tended to be higher in the hindlimb-suspended group than in the control group; however, this difference was not significant. The concentrations of 3 other minerals (I, K, and Mg) were significantly different between the 2 groups. The iodine (I) level was 58.2% higher in the hindlimb-suspended group than in the control group (P<0.05). Potassium (K) and magnesium (Mg) levels were 55.2% and 20.4% lower, respectively, in the experimental group (P<0.05 in both cases). These results indicate that a physiological change in mineral metabolism resulting from physical or mental stress, such as hindlimb suspension, is reflected in body hair. The Japan Aerospace Exploration Agency (JAXA) has initiated a human research study to investigate the effects of long-term space flight on gene expression and mineral metabolism by analyzing hair samples of astronauts who stayed in the International Space Station (ISS) for 6 months. We believe that hindlimb suspension for 14 days can simulate the effects of an extremely severe environment, such as space flight, because the hindlimb suspension model elicits a rapid physiological change in skeletal muscle, bone, and fluid shift even in the short term. These results also suggest that we can detect various effects on the body by analyzing the human scalp hair shaft.

  9. Nonlinear analysis and performance evaluation of the Annular Suspension and Pointing System (ASPS)

    NASA Technical Reports Server (NTRS)

    Joshi, S. M.

    1978-01-01

    The Annular Suspension and Pointing System (ASPS) can provide high accurate fine pointing for a variety of solar-, stellar-, and Earth-viewing scientific instruments during space shuttle orbital missions. In this report, a detailed nonlinear mathematical model is developed for the ASPS/Space Shuttle system. The equations are augmented with nonlinear models of components such as magnetic actuators and gimbal torquers. Control systems and payload attitude state estimators are designed in order to obtain satisfactory pointing performance, and statistical pointing performance is predicted in the presence of measurement noise and disturbances.

  10. [Particle Size and Number Density Online Analysis for Particle Suspension with Polarization-Differentiation Elastic Light Scattering Spectroscopy].

    PubMed

    Chen, Wei-kang; Fang, Hui

    2016-03-01

    The basic principle of polarization-differentiation elastic light scattering spectroscopy based techniques is that under the linear polarized light incidence, the singlely scattered light from the superficial biological tissue and diffusively scattered light from the deep tissue can be separated according to the difference of polarization characteristics. The novel point of the paper is to apply this method to the detection of particle suspension and, to realize the simultaneous measurement of its particle size and number density in its natural status. We design and build a coaxial cage optical system, and measure the backscatter signal at a specified angle from a polystyrene microsphere suspension. By controlling the polarization direction of incident light with a linear polarizer and adjusting the polarization direction of collected light with another linear polarizer, we obtain the parallel polarized elastic light scattering spectrum and cross polarized elastic light scattering spectrum. The difference between the two is the differential polarized elastic light scattering spectrum which include only the single scattering information of the particles. We thus compare this spectrum to the Mie scattering calculation and extract the particle size. We then also analyze the cross polarized elastic light scattering spectrum by applying the particle size already extracted. The analysis is based on the approximate expressions taking account of light diffusing, from which we are able to obtain the number density of the particle suspension. We compare our experimental outcomes with the manufacturer-provided values and further analyze the influence of the particle diameter standard deviation on the number density extraction, by which we finally verify the experimental method. The potential applications of the method include the on-line particle quality monitoring for particle manufacture as well as the fat and protein density detection of milk products. PMID:27400522

  11. Array Independent Component Analysis with Application to Remote Sensing

    NASA Astrophysics Data System (ADS)

    Kukuyeva, Irina A.

    2012-11-01

    There are three ways to learn about an object: from samples taken directly from the site, from simulation studies based on its known scientific properties, or from remote sensing images. All three are carried out to study Earth and Mars. Our goal, however, is to learn about the second largest storm on Jupiter, called the White Oval, whose characteristics are unknown to this day. As Jupiter is a gas giant and hundreds of millions of miles away from Earth, we can only make inferences about the planet from retrieval algorithms and remotely sensed images. Our focus is to find latent variables from the remotely sensed data that best explain its underlying atmospheric structure. Principal Component Analysis (PCA) is currently the most commonly employed technique to do so. For a data set with more than two modes, this approach fails to account for all of the variable interactions, especially if the distribution of the variables is not multivariate normal; an assumption that is rarely true of multispectral images. The thesis presents an overview of PCA along with the most commonly employed decompositions in other fields: Independent Component Analysis, Tucker-3 and CANDECOMP/PARAFAC and discusses their limitations in finding unobserved, independent structures in a data cube. We motivate the need for a novel dimension reduction technique that generalizes existing decompositions to find latent, statistically independent variables for one side of a multimodal (number of modes greater than two) data set while accounting for the variable interactions with its other modes. Our method is called Array Independent Component Analysis (AICA). As the main question of any decomposition is how to select a small number of latent variables that best capture the structure in the data, we extend the heuristic developed by Ceulemans and Kiers in [10] to aid in model selection for the AICA framework. The effectiveness of each dimension reduction technique is determined by the degree of

  12. Magnetotelluric array data analysis from north-west Fennoscandia

    NASA Astrophysics Data System (ADS)

    Cherevatova, M.; Smirnov, M. Yu.; Jones, A. G.; Pedersen, L. B.; Becken, M.; Biolik, M.; Cherevatova, M.; Ebbing, J.; Gradmann, S.; Gurk, M.; Hübert, J.; Jones, A. G.; Junge, A.; Kamm, J.; Korja, T.; Lahti, I.; Löwer, A.; Nittinger, C.; Pedersen, L. B.; Savvaidis, A.; Smirnov, M.

    2015-06-01

    New magnetotelluric (MT) data in north-west Fennoscandia were acquired within the framework of the project "Magnetotellurics in the Scandes" (MaSca). The project focuses on the investigation of the crustal and upper mantle lithospheric structure in the transition zone from stable Precambrian cratonic interior to passive continental margin beneath the Caledonian orogen and the Scandinavian Mountains in western Fennoscandia. An array of 59 synchronous long period and 220 broad-band MT sites was occupied in the summers of 2011 to 2013. We estimated MT transfer functions in the period range from 0.003 to 105 s. The Q-function multi-site multi-frequency analysis and the phase tensor were used to estimate strike and dimensionality of MT data. Dimensionality and strike analyses indicate generally 2-D behaviour of the data with 3-D effects at some sites and period bands. In this paper we present 2-D inversion of the data, 3-D inversion models are shown in the parallel paper. We choose to invert the determinant of the impedance tensor to mitigate 3-D effects in the data on our 2-D models. Seven crustal-scale and four lithospheric-scale 2-D models are presented. The resistive regions are images of the Archaean and Proterozoic basement in the east and thin Caledonian nappes in the west. The middle and lower crust of the Svecofennian province is conductive. The southern end of the Kittilä Greenstone Belt is seen in the models as a strong upper to middle crustal conductor. In the Caledonides, the highly conductive alum shales are observed along the Caledonian Thrust Front. The thickest lithosphere is in the Palaeoproterozioc Svecofennian Domain, not in the Archaean. The thickness of the lithosphere is around 200 km in the north and 300 km in the south-west.

  13. Microfluidic bead suspension hopper.

    PubMed

    Price, Alexander K; MacConnell, Andrew B; Paegel, Brian M

    2014-05-20

    Many high-throughput analytical platforms, from next-generation DNA sequencing to drug discovery, rely on beads as carriers of molecular diversity. Microfluidic systems are ideally suited to handle and analyze such bead libraries with high precision and at minute volume scales; however, the challenge of introducing bead suspensions into devices before they sediment usually confounds microfluidic handling and analysis. We developed a bead suspension hopper that exploits sedimentation to load beads into a microfluidic droplet generator. A suspension hopper continuously delivered synthesis resin beads (17 μm diameter, 112,000 over 2.67 h) functionalized with a photolabile linker and pepstatin A into picoliter-scale droplets of an HIV-1 protease activity assay to model ultraminiaturized compound screening. Likewise, trypsinogen template DNA-coated magnetic beads (2.8 μm diameter, 176,000 over 5.5 h) were loaded into droplets of an in vitro transcription/translation system to model a protein evolution experiment. The suspension hopper should effectively remove any barriers to using suspensions as sample inputs, paving the way for microfluidic automation to replace robotic library distribution. PMID:24761972

  14. Thermal correlation analysis of a long-span suspension bridge static responses

    NASA Astrophysics Data System (ADS)

    Zhou, Linren; Chen, Lan; Xia, Yong; Brownjohn, James M. W.

    2016-04-01

    Harsh service environment degenerates the performance of bridges even leads to catastrophic collapse. Structural temperature has been widely recognized as one of the most negative environmental effects on bridges. The structural responses are deeply affected by the variation and distribution of temperatures on bridges. Therefore, identifying the correlations between them is a significant issue for structural safety assessment. In this study, the relationships between the temperature induced static response and the surrounding weather factors are investigated based on the long-term field measurements of a long-span suspension bridge. The correlations of the meteorological parameters between the bridge filed and the nearby weather station, and the relations of structural static responses to the air temperature, are investigated. The results indicate that relationships of meteorological parameters between nearby weather station and the bridge field can be predicted. The correlation between the static responses and the air temperature and is remarkable with high correlation coefficient. The conclusions are expected to provide reference for the design and evaluation of longspan suspension bridges.

  15. Analysis of reconfigurable line pattern of capillary plasma antenna array

    NASA Astrophysics Data System (ADS)

    Ramli, Noor Fadhilah; Dagang, Ahmad Nazri; Ali, Mohd Tarmizi

    2015-04-01

    Simulations by applying Computer Simulation Technology (CST) Microwave Studio have been done towards Hg-Ar (10 Torr and 20 Torr) capillary tubes. These capillary tubes which are 5 mm in diameter are designed as plasma antenna monopole antenna and antenna arrays (four line array, six line array and nine line array). They have been arranged in the two different dimensions, 4mm × 4mm and 8mm × 8mm. Their performance as an antenna have been analyzed and compared. The reconfigurable characteristics of these kinds of plasma antenna such as gain, directivity and return loss are calculated. The results of gain and directivity of 10 Torr of plasma antenna are stronger than 20 Torr in the 4mm × 4mm dimension. Return loss of these kinds of plasma antenna significantly dropped in different operating frequencies of microwave ranges make them suitable to be applied for multiple applications in antennas or telecommunications field. Gas pressure of plasma antenna and array distance between the capillary tubes give a significant effect to the antenna performance in range of 10 GHz and below.

  16. Acoustic analysis by spherical microphone array processing of room impulse responses.

    PubMed

    Khaykin, Dima; Rafaely, Boaz

    2012-07-01

    Spherical microphone arrays have been recently used for room acoustics analysis, to detect the direction-of-arrival of early room reflections, and compute directional room impulse responses and other spatial room acoustics parameters. Previous works presented methods for room acoustics analysis using spherical arrays that are based on beamforming, e.g., delay-and-sum, regular beamforming, and Dolph-Chebyshev beamforming. Although beamforming methods provide useful directional selectivity, optimal array processing methods can provide enhanced performance. However, these algorithms require an array cross-spectrum matrix with a full rank, while array data based on room impulse responses may not satisfy this condition due to the single frame data. This paper presents a smoothing technique for the cross-spectrum matrix in the frequency domain, designed for spherical microphone arrays, that can solve the problem of low rank when using room impulse response data, therefore facilitating the use of optimal array processing methods. Frequency smoothing is shown to be performed effectively using spherical arrays, due to the decoupling of frequency and angular components in the spherical harmonics domain. Experimental study with data measured in a real auditorium illustrates the performance of optimal array processing methods such as MUSIC and MVDR compared to beamforming. PMID:22779475

  17. Computational Analysis of Static and Dynamic Behaviour of Magnetic Suspensions and Magnetic Bearings

    NASA Technical Reports Server (NTRS)

    Britcher, Colin P. (Editor); Groom, Nelson J.

    1996-01-01

    Static modelling of magnetic bearings is often carried out using magnetic circuit theory. This theory cannot easily include nonlinear effects such as magnetic saturation or the fringing of flux in air-gaps. Modern computational tools are able to accurately model complex magnetic bearing geometries, provided some care is exercised. In magnetic suspension applications, the magnetic fields are highly three-dimensional and require computational tools for the solution of most problems of interest. The dynamics of a magnetic bearing or magnetic suspension system can be strongly affected by eddy currents. Eddy currents are present whenever a time-varying magnetic flux penetrates a conducting medium. The direction of flow of the eddy current is such as to reduce the rate-of-change of flux. Analytic solutions for eddy currents are available for some simplified geometries, but complex geometries must be solved by computation. It is only in recent years that such computations have been considered truly practical. At NASA Langley Research Center, state-of-the-art finite-element computer codes, 'OPERA', 'TOSCA' and 'ELEKTRA' have recently been installed and applied to the magnetostatic and eddy current problems. This paper reviews results of theoretical analyses which suggest general forms of mathematical models for eddy currents, together with computational results. A simplified circuit-based eddy current model proposed appears to predict the observed trends in the case of large eddy current circuits in conducting non-magnetic material. A much more difficult case is seen to be that of eddy currents in magnetic material, or in non-magnetic material at higher frequencies, due to the lower skin depths. Even here, the dissipative behavior has been shown to yield at least somewhat to linear modelling. Magnetostatic and eddy current computations have been carried out relating to the Annular Suspension and Pointing System, a prototype for a space payload pointing and vibration

  18. Guidelines for genomic array analysis in acquired haematological neoplastic disorders.

    PubMed

    Schoumans, Jacqueline; Suela, Javier; Hastings, Ros; Muehlematter, Dominique; Rack, Katrina; van den Berg, Eva; Berna Beverloo, H; Stevens-Kroef, Marian

    2016-05-01

    Genetic profiling is important for disease evaluation and prediction of prognosis or responsiveness to therapy in neoplasia. Microarray technologies, including array comparative genomic hybridization and single-nucleotide polymorphism-detecting arrays, have in recent years been introduced into the diagnostic setting for specific types of haematological malignancies and solid tumours. It can be used as a complementary test or depending on the neoplasia investigated, also as a standalone test. However, comprehensive and readable presentation of frequently identified complex genomic profiles remains challenging. To assist diagnostic laboratories, standardization and minimum criteria for clinical interpretation and reporting of acquired genomic abnormalities detected through arrays in neoplastic disorders are presented. © 2016 Wiley Periodicals, Inc. PMID:26774012

  19. High-throughput cell analysis using multiplexed array technologies.

    PubMed

    Beske, Oren E; Goldbard, Simon

    2002-09-15

    The desire for more biologically relevant data from primary screening has resulted in a dramatic increase of cell-based assays in HTS labs. Consequently, new cell-array technologies are being developed to increase the quality and quantity of data emerging from such screens. These technologies take the form of both positional and non-positional formats, each with their own advantages. Notably, screens using these technologies generate databases of high-quality data that can be analyzed in ways currently not possible. The power of cell-based assays combined with new array and analytical technologies will enable the condensation of serial drug discovery processes, thereby decreasing the time and cost of taking a hit compound into clinical trials. Here, we compare array strategies being developed towards the goal of integrating multiplexed cell-based assays into HTS. PMID:12546879

  20. Adaptive Injection-locking Oscillator Array for RF Spectrum Analysis

    SciTech Connect

    Leung, Daniel

    2011-04-19

    A highly parallel radio frequency receiver using an array of injection-locking oscillators for on-chip, rapid estimation of signal amplitudes and frequencies is considered. The oscillators are tuned to different natural frequencies, and variable gain amplifiers are used to provide negative feedback to adapt the locking band-width with the input signal to yield a combined measure of input signal amplitude and frequency detuning. To further this effort, an array of 16 two-stage differential ring oscillators and 16 Gilbert-cell mixers is designed for 40-400 MHz operation. The injection-locking oscillator array is assembled on a custom printed-circuit board. Control and calibration is achieved by on-board microcontroller.

  1. Array2BIO: A Comprehensive Suite of Utilities for the Analysis of Microarray Data

    SciTech Connect

    Loots, G G; Chain, P G; Mabery, S; Rasley, A; Garcia, E; Ovcharenko, I

    2006-02-13

    We have developed an integrative and automated toolkit for the analysis of Affymetrix microarray data, named Array2BIO. It identifies groups of coexpressed genes using two complementary approaches--comparative analysis of signal versus control microarrays and clustering analysis of gene expression across different conditions. The identified genes are assigned to functional categories based on the Gene Ontology classification, and a detection of corresponding KEGG protein interaction pathways. Array2BIO reliably handles low-expressor genes and provides a set of statistical methods to quantify the odds of observations, including the Benjamini-Hochberg and Bonferroni multiple testing corrections. Automated interface with the ECR Browser provides evolutionary conservation analysis of identified gene loci while the interconnection with Creme allows high-throughput analysis of human promoter regions and prediction of gene regulatory elements that underlie the observed expression patterns. Array2BIO is publicly available at http://array2bio.dcode.org.

  2. Cantilever arrays for multiplexed mechanical analysis of biomolecular reactions.

    PubMed

    Yue, Min; Stachowiak, Jeanne C; Majumdar, Arunava

    2004-09-01

    Microchips containing arrays of cantilever beams have been used to mechanically detect and quantitatively analyze multiple reactions of DNA hybridization and antigen-antibody binding simultaneously. The reaction-induced deflection of a cantilever beam reflects the interplay between strain energy increase of the beam and the free energy reduction of a reaction, providing an ideal tool for investigating the connection between mechanics and chemistry of biomolecular reactions. Since free energy reduction is common for all reactions, the cantilever array forms a universal platform for label-free detection of various specific biomolecular reactions. A few such reactions and their implications in biology and biotechnology are discussed. PMID:16783934

  3. Recent Developments in the Analysis of Couple Oscillator Arrays

    NASA Technical Reports Server (NTRS)

    Pogorzelski, Ronald J.

    2000-01-01

    This presentation considers linear arrays of coupled oscillators. Our purpose in coupling oscillators together is to achieve high radiated power through the spatial power combining which results when the oscillators are injection locked to each other. York, et. al. have shown that, left to themselves, the ensemble of injection locked oscillators oscillate at the average of the tuning frequencies of all the oscillators. Coupling these arrays achieves high radiated power through coherent spatial power combining. The coupled oscillators are usually designed to produce constant aperture phase. Oscillators are injection locked to each other or to a master oscillator to produce coherent radiation. Oscillators do not necessarily oscillate at their tuning frequency.

  4. Simple, Precise and Accurate HPLC Method of Analysis for Nevirapine Suspension from Human Plasma

    PubMed Central

    Halde, S.; Mungantiwar, A.; Chintamaneni, M.

    2011-01-01

    A selective and sensitive high performance liquid chromatography with UV detector (HPLC-UV) method was developed and validated from human plasma. Nevirapine and internal standard (IS) zidovudine were extracted from human plasma by liquid-liquid extraction process using methyl tert-butyl ether. The samples were analysed using Inertsil ODS 3, 250×4.6 mm, 5 μ column using a mobile phase consists of 50 mM sodium acetate buffer solution (pH-4.00±0.05): acetonitrile (73:27 v/v). The method was validated over a concentration range of 50.00 ng/ml to 3998.96 ng/ml. The method was successfully applied to bioequivalence study of 10 ml single dose nevirapine oral suspension 50 mg/5 ml in healthy male volunteers. PMID:22707826

  5. Physical analysis of light-scattering changes in bovine photoreceptor membrane suspensions.

    PubMed Central

    Michel-Villaz, M; Brisson, A; Chapron, Y; Saibil, H

    1984-01-01

    We have used electron microscopy and model calculations to analyze the physical basis of light-scattering signals from suspensions of photoreceptor membranes. These signals have previously been used to probe interactions between photoactivated rhodopsin (R*) and the peripheral membrane enzyme, GTP-binding protein (G) (Kühn et al., 1981, Proc. Natl. Acad. Sci. USA., 78:6873-6877). Although there is no unique physical interpretation of these signals, we have shown in this study that they were qualitatively unchanged when the rod outer segment fragments (containing stacked disks) were fragmented by sonication or osmotic shock to produce spherical disk membrane vesicles. An exact treatment of the scattering process for spherical vesicles enabled us to evaluate the effects of changing membrane thickness, refractive index, or vesicle diameter. We present a particular redistribution of mass upon R*-G interaction that fits the experimental data. Images FIGURE 4 PMID:6498278

  6. Panax ginseng Adventitious Root Suspension Culture: Protocol for Biomass Production and Analysis of Ginsenosides by High Pressure Liquid Chromatography.

    PubMed

    Murthy, Hosakatte Niranjana; Paek, Kee Yoeup

    2016-01-01

    Panax ginseng C.A. Meyer (Korean ginseng) is a popular herbal medicine. It has been used in Chinese and Oriental medicines since thousands of years. Ginseng products are generally used as a tonic and an adaptogen to resist the adverse influence of a wide range of physical, chemical and biological factors, and to restore homeostasis. Ginsenosides or ginseng saponins are the principal active ingredients of ginseng. Since ginseng cultivation process is very slow and needs specific environment for field cultivation, cell and tissue cultures are sought as alternatives for the production of ginseng biomass and bioactive compounds. In this chapter, we focus on methods of induction of adventitious roots from ginseng roots, establishment of adventitious root suspension cultures using bioreactors, procedures for processing of adventitious roots, and analysis of ginsenosides by high pressure liquid chromatography. PMID:27108314

  7. In situ structural analysis of Golgi intracisternal protein arrays.

    PubMed

    Engel, Benjamin D; Schaffer, Miroslava; Albert, Sahradha; Asano, Shoh; Plitzko, Jürgen M; Baumeister, Wolfgang

    2015-09-01

    We acquired molecular-resolution structures of the Golgi within its native cellular environment. Vitreous Chlamydomonas cells were thinned by cryo-focused ion beam milling and then visualized by cryo-electron tomography. These tomograms revealed structures within the Golgi cisternae that have not been seen before. Narrow trans-Golgi lumina were spanned by asymmetric membrane-associated protein arrays that had ∼6-nm lateral periodicity. Subtomogram averaging showed that the arrays may determine the narrow central spacing of the trans-Golgi cisternae through zipper-like interactions, thereby forcing cargo to the trans-Golgi periphery. Additionally, we observed dense granular aggregates within cisternae and intracisternal filament bundles associated with trans-Golgi buds. These native in situ structures provide new molecular insights into Golgi architecture and function. PMID:26311849

  8. In situ structural analysis of Golgi intracisternal protein arrays

    PubMed Central

    Engel, Benjamin D.; Schaffer, Miroslava; Albert, Sahradha; Asano, Shoh; Plitzko, Jürgen M.; Baumeister, Wolfgang

    2015-01-01

    We acquired molecular-resolution structures of the Golgi within its native cellular environment. Vitreous Chlamydomonas cells were thinned by cryo-focused ion beam milling and then visualized by cryo-electron tomography. These tomograms revealed structures within the Golgi cisternae that have not been seen before. Narrow trans-Golgi lumina were spanned by asymmetric membrane-associated protein arrays that had ∼6-nm lateral periodicity. Subtomogram averaging showed that the arrays may determine the narrow central spacing of the trans-Golgi cisternae through zipper-like interactions, thereby forcing cargo to the trans-Golgi periphery. Additionally, we observed dense granular aggregates within cisternae and intracisternal filament bundles associated with trans-Golgi buds. These native in situ structures provide new molecular insights into Golgi architecture and function. PMID:26311849

  9. Analysis of modified SMI method for adaptive array weight control

    NASA Technical Reports Server (NTRS)

    Dilsavor, R. L.; Moses, R. L.

    1989-01-01

    An adaptive array is applied to the problem of receiving a desired signal in the presence of weak interference signals which need to be suppressed. A modification, suggested by Gupta, of the sample matrix inversion (SMI) algorithm controls the array weights. In the modified SMI algorithm, interference suppression is increased by subtracting a fraction F of the noise power from the diagonal elements of the estimated covariance matrix. Given the true covariance matrix and the desired signal direction, the modified algorithm is shown to maximize a well-defined, intuitive output power ratio criterion. Expressions are derived for the expected value and variance of the array weights and output powers as a function of the fraction F and the number of snapshots used in the covariance matrix estimate. These expressions are compared with computer simulation and good agreement is found. A trade-off is found to exist between the desired level of interference suppression and the number of snapshots required in order to achieve that level with some certainty. The removal of noise eigenvectors from the covariance matrix inverse is also discussed with respect to this application. Finally, the type and severity of errors which occur in the covariance matrix estimate are characterized through simulation.

  10. Optoelectronic analysis of multijunction wire array solar cells

    NASA Astrophysics Data System (ADS)

    Turner-Evans, Daniel B.; Chen, Christopher T.; Emmer, Hal; McMahon, William E.; Atwater, Harry A.

    2013-07-01

    Wire arrays have demonstrated promising photovoltaic performance as single junction solar cells and are well suited to defect mitigation in heteroepitaxy. These attributes can combine in tandem wire array solar cells, potentially leading to high efficiencies. Here, we demonstrate initial growths of GaAs on Si0.9Ge0.1 structures and investigate III-V on Si1-xGex device design with an analytical model and optoelectronic simulations. We consider Si0.1Ge0.9 wires coated with a GaAs0.9P0.1 shell in three different geometries: conformal, hemispherical, and spherical. The analytical model indicates that efficiencies approaching 34% are achievable with high quality materials. Full field electromagnetic simulations serve to elucidate the optical loss mechanisms and demonstrate light guiding into the wire core. Simulated current-voltage curves under solar illumination reveal the impact of a varying GaAs0.9P0.1 minority carrier lifetime. Finally, defective regions at the hetero-interface are shown to have a negligible effect on device performance if highly doped so as to serve as a back surface field. Overall, the growths and the model demonstrate the feasibility of the proposed geometries and can be used to guide tandem wire array solar cell designs.

  11. Exon array data analysis using Affymetrix power tools and R statistical software

    PubMed Central

    2011-01-01

    The use of microarray technology to measure gene expression on a genome-wide scale has been well established for more than a decade. Methods to process and analyse the vast quantity of expression data generated by a typical microarray experiment are similarly well-established. The Affymetrix Exon 1.0 ST array is a relatively new type of array, which has the capability to assess expression at the individual exon level. This allows a more comprehensive analysis of the transcriptome, and in particular enables the study of alternative splicing, a gene regulation mechanism important in both normal conditions and in diseases. Some aspects of exon array data analysis are shared with those for standard gene expression data but others present new challenges that have required development of novel tools. Here, I will introduce the exon array and present a detailed example tutorial for analysis of data generated using this platform. PMID:21498550

  12. Effect analysis and design on array geometry for coincidence imaging radar based on effective rank theory

    NASA Astrophysics Data System (ADS)

    Zha, Guofeng; Wang, Hongqiang; Yang, Zhaocheng; Cheng, Yongqiang; Qin, Yuliang

    2016-03-01

    As a complementary imaging technology, coincidence imaging radar (CIR) achieves super-resolution in real aperture staring radar imagery via employing the temporal-spatial independent array detecting (TSIAD) signals. The characters of TSIAD signals are impacted by the array geometry and the imaging performance are influenced by the relative imaging position with respect to antennas array. In this paper, the effect of array geometry on CIR system is investigated in detail based on the judgment criteria of the effective rank theory. In course of analyzing of these influences, useful system design guidance about the array geometry is remarked for the CIR system. With the design guidance, the target images are reconstructed based on the Tikhonov regularization algorithm. Simulation results are presented to validate the whole analysis and the efficiency of the design guidance.

  13. Modeling and analysis of a negative stiffness magnetic suspension vibration isolator with experimental investigations.

    PubMed

    Zhu, Yu; Li, Qiang; Xu, Dengfeng; Hu, Chuxiong; Zhang, Ming

    2012-09-01

    This paper presents a negative stiffness magnetic suspension vibration isolator (NSMSVI) using magnetic spring and rubber ligaments. The positive stiffness is obtained by repulsive magnetic spring while the negative stiffness is gained by rubber ligaments. In order to study the vibration isolation performance of the NSMSVI, an analytical expression of the vertical stretch force of the rubber ligament is constructed. Experiments are carried out, which demonstrates that the analytical expression is effective. Then an analytical expression of the vertical stiffness of the rubber ligament is deduced by the derivative of the stretch force of the rubber ligament with respect to the displacement of the inner magnetic ring. Furthermore, the parametric study of the magnetic spring and rubber ligament are carried out. As a case study, the size dimensions of the magnetic spring and rubber ligament are determined. Finally, an NSMSVI table was built to verify the vibration isolation performance of the NSMSVI. The transmissibility curves of the NSMSVI are subsequently calculated and tested by instruments. The experimental results reveal that there is a good consistency between the measured transmissibility and the calculated ones, which proves that the proposed NSMSVI is effective and can realize low-frequency vibration isolation. PMID:23020420

  14. Modeling and analysis of a negative stiffness magnetic suspension vibration isolator with experimental investigations

    NASA Astrophysics Data System (ADS)

    Zhu, Yu; Li, Qiang; Xu, Dengfeng; Hu, Chuxiong; Zhang, Ming

    2012-09-01

    This paper presents a negative stiffness magnetic suspension vibration isolator (NSMSVI) using magnetic spring and rubber ligaments. The positive stiffness is obtained by repulsive magnetic spring while the negative stiffness is gained by rubber ligaments. In order to study the vibration isolation performance of the NSMSVI, an analytical expression of the vertical stretch force of the rubber ligament is constructed. Experiments are carried out, which demonstrates that the analytical expression is effective. Then an analytical expression of the vertical stiffness of the rubber ligament is deduced by the derivative of the stretch force of the rubber ligament with respect to the displacement of the inner magnetic ring. Furthermore, the parametric study of the magnetic spring and rubber ligament are carried out. As a case study, the size dimensions of the magnetic spring and rubber ligament are determined. Finally, an NSMSVI table was built to verify the vibration isolation performance of the NSMSVI. The transmissibility curves of the NSMSVI are subsequently calculated and tested by instruments. The experimental results reveal that there is a good consistency between the measured transmissibility and the calculated ones, which proves that the proposed NSMSVI is effective and can realize low-frequency vibration isolation.

  15. Inverse problem analysis of pluripotent stem cell aggregation dynamics in stirred-suspension cultures.

    PubMed

    Rostami, Mahboubeh Rahmati; Wu, Jincheng; Tzanakakis, Emmanuel S

    2015-08-20

    The cultivation of stem cells as aggregates in scalable bioreactor cultures is an appealing modality for the large-scale manufacturing of stem cell products. Aggregation phenomena are central to such bioprocesses affecting the viability, proliferation and differentiation trajectory of stem cells but a quantitative framework is currently lacking. A population balance equation (PBE) model was used to describe the temporal evolution of the embryonic stem cell (ESC) cluster size distribution by considering collision-induced aggregation and cell proliferation in a stirred-suspension vessel. For ESC cultures at different agitation rates, the aggregation kernel representing the aggregation dynamics was successfully recovered as a solution of the inverse problem. The rate of change of the average aggregate size was greater at the intermediate rate tested suggesting a trade-off between increased collisions and agitation-induced shear. Results from forward simulation with obtained aggregation kernels were in agreement with transient aggregate size data from experiments. We conclude that the framework presented here can complement mechanistic studies offering insights into relevant stem cell clustering processes. More importantly from a process development standpoint, this strategy can be employed in the design and control of bioreactors for the generation of stem cell derivatives for drug screening, tissue engineering and regenerative medicine. PMID:26036699

  16. Experimental and numerical analysis of clamped joints in front motorbike suspensions

    NASA Astrophysics Data System (ADS)

    Croccolo, D.; de Agostinis, M.; Vincenzi, N.

    2010-06-01

    Clamped joints are shaft-hub connections used, as an instance, in front motorbike suspensions to lock the steering plates with the legs and the legs with the wheel pin, by means of one or two bolts. The preloading force, produced during the tightening process, should be evaluated accurately, since it must lock safely the shaft, without overcoming the yielding point of the hub. Firstly, friction coefficients have been evaluated on “ad-hoc designed” specimens, by applying the Design of Experiment approach: the applied tightening torque has been precisely related to the imposed preloading force. Then, the tensile state of clamps have been evaluated both via FEM and by leveraging some design formulae proposed by the Authors as function of the preloading force and of the clamp geometry. Finally, the results have been compared to those given by some strain gauges applied on the tested clamps: the discrepancies between numerical analyses, the design formulae and the experimental results remains under a threshold of 10%.

  17. Balanced into array: genome-wide array analysis in 54 patients with an apparently balanced de novo chromosome rearrangement and a meta-analysis

    PubMed Central

    Feenstra, Ilse; Hanemaaijer, Nicolien; Sikkema-Raddatz, Birgit; Yntema, Helger; Dijkhuizen, Trijnie; Lugtenberg, Dorien; Verheij, Joke; Green, Andrew; Hordijk, Roel; Reardon, William; Vries, Bert de; Brunner, Han; Bongers, Ernie; Leeuw, Nicole de; van Ravenswaaij-Arts, Conny

    2011-01-01

    High-resolution genome-wide array analysis enables detailed screening for cryptic and submicroscopic imbalances of microscopically balanced de novo rearrangements in patients with developmental delay and/or congenital abnormalities. In this report, we added the results of genome-wide array analysis in 54 patients to data on 117 patients from seven other studies. A chromosome imbalance was detected in 37% of all patients with two-breakpoint rearrangements. In 49% of these patients, the imbalances were located in one or both breakpoint regions. Imbalances were more frequently (90%) found in complex rearrangements, with the majority (81%) having deletions in the breakpoint regions. The size of our own cohort enabled us to relate the presence of an imbalance to the clinical features of the patients by using a scoring system, the De Vries criteria, that indicates the complexity of the phenotype. The median De Vries score was significantly higher (P=0.002) in those patients with an imbalance (5, range 1–9) than in patients with a normal array result (3, range 0–7). This study provides accurate percentages of cryptic imbalances that can be detected by genome-wide array analysis in simple and complex de novo microscopically balanced chromosome rearrangements and confirms that these imbalances are more likely to occur in patients with a complex phenotype. PMID:21712853

  18. Oligonucleotide arrays vs. metaphase-comparative genomic hybridisation and BAC arrays for single-cell analysis: first applications to preimplantation genetic diagnosis for Robertsonian translocation carriers.

    PubMed

    Ramos, Laia; del Rey, Javier; Daina, Gemma; García-Aragonés, Manel; Armengol, Lluís; Fernandez-Encinas, Alba; Parriego, Mònica; Boada, Montserrat; Martinez-Passarell, Olga; Martorell, Maria Rosa; Casagran, Oriol; Benet, Jordi; Navarro, Joaquima

    2014-01-01

    Comprehensive chromosome analysis techniques such as metaphase-Comparative Genomic Hybridisation (CGH) and array-CGH are available for single-cell analysis. However, while metaphase-CGH and BAC array-CGH have been widely used for Preimplantation Genetic Diagnosis, oligonucleotide array-CGH has not been used in an extensive way. A comparison between oligonucleotide array-CGH and metaphase-CGH has been performed analysing 15 single fibroblasts from aneuploid cell-lines and 18 single blastomeres from human cleavage-stage embryos. Afterwards, oligonucleotide array-CGH and BAC array-CGH were also compared analysing 16 single blastomeres from human cleavage-stage embryos. All three comprehensive analysis techniques provided broadly similar cytogenetic profiles; however, non-identical profiles appeared when extensive aneuploidies were present in a cell. Both array techniques provided an optimised analysis procedure and a higher resolution than metaphase-CGH. Moreover, oligonucleotide array-CGH was able to define extra segmental imbalances in 14.7% of the blastomeres and it better determined the specific unbalanced chromosome regions due to a higher resolution of the technique (≈ 20 kb). Applicability of oligonucleotide array-CGH for Preimplantation Genetic Diagnosis has been demonstrated in two cases of Robertsonian translocation carriers 45,XY,der(13;14)(q10;q10). Transfer of euploid embryos was performed in both cases and pregnancy was achieved by one of the couples. This is the first time that an oligonucleotide array-CGH approach has been successfully applied to Preimplantation Genetic Diagnosis for balanced chromosome rearrangement carriers. PMID:25415307

  19. Oligonucleotide Arrays vs. Metaphase-Comparative Genomic Hybridisation and BAC Arrays for Single-Cell Analysis: First Applications to Preimplantation Genetic Diagnosis for Robertsonian Translocation Carriers

    PubMed Central

    Ramos, Laia; del Rey, Javier; Daina, Gemma; García-Aragonés, Manel; Armengol, Lluís; Fernandez-Encinas, Alba; Parriego, Mònica; Boada, Montserrat; Martinez-Passarell, Olga; Martorell, Maria Rosa; Casagran, Oriol; Benet, Jordi; Navarro, Joaquima

    2014-01-01

    Comprehensive chromosome analysis techniques such as metaphase-Comparative Genomic Hybridisation (CGH) and array-CGH are available for single-cell analysis. However, while metaphase-CGH and BAC array-CGH have been widely used for Preimplantation Genetic Diagnosis, oligonucleotide array-CGH has not been used in an extensive way. A comparison between oligonucleotide array-CGH and metaphase-CGH has been performed analysing 15 single fibroblasts from aneuploid cell-lines and 18 single blastomeres from human cleavage-stage embryos. Afterwards, oligonucleotide array-CGH and BAC array-CGH were also compared analysing 16 single blastomeres from human cleavage-stage embryos. All three comprehensive analysis techniques provided broadly similar cytogenetic profiles; however, non-identical profiles appeared when extensive aneuploidies were present in a cell. Both array techniques provided an optimised analysis procedure and a higher resolution than metaphase-CGH. Moreover, oligonucleotide array-CGH was able to define extra segmental imbalances in 14.7% of the blastomeres and it better determined the specific unbalanced chromosome regions due to a higher resolution of the technique (≈20 kb). Applicability of oligonucleotide array-CGH for Preimplantation Genetic Diagnosis has been demonstrated in two cases of Robertsonian translocation carriers 45,XY,der(13;14)(q10;q10). Transfer of euploid embryos was performed in both cases and pregnancy was achieved by one of the couples. This is the first time that an oligonucleotide array-CGH approach has been successfully applied to Preimplantation Genetic Diagnosis for balanced chromosome rearrangement carriers. PMID:25415307

  20. A nongray analysis of radiating-convecting rectangular plate-fin arrays

    NASA Astrophysics Data System (ADS)

    Elazhary, A. M.; Soliman, H. M.

    2008-02-01

    A complete analysis of heat transfer in rectangular fin arrays has been conducted taking into consideration convection and radiation at all surfaces, as well as radiative exchange between the fins and all neighboring surfaces. The analysis assumes diffuse nongray surfaces and uses the spectral optical properties of stainless steel AISI 430. Three different gray models were proposed in order to assess the effect of the gray assumption on the heat-transfer characteristics. Results are presented for the temperature and radiative-flux distributions along the fin, the radiative flux along the base, the contribution of the radiative component to the overall heat transfer, and the effectiveness of the fin array. Significant deviations in some of these results were found between the nongray model and the gray models. In general, convection was found to be the more effective mode of heat transfer in fin arrays and the effectiveness of the array decreases as the contribution of the radiative component increases.

  1. Tremor patches in Cascadia revealed by seismic array analysis

    NASA Astrophysics Data System (ADS)

    Ghosh, Abhijit; Vidale, John E.; Sweet, Justin R.; Creager, Kenneth C.; Wech, Aaron G.

    2009-09-01

    Episodic tremor and slip (ETS) events in Cascadia have recently been observed, illuminating the general area that radiates seismic energy in the form of non-volcanic tremor (NVT). However, the picture of the ETS zone remains fuzzy because of difficulties in tremor detection and location. To observe the intimate details of tremor, we deployed a dense 84-element small-aperture seismic array on the Olympic Peninsula, Washington, above the tremor migration path. It recorded the main ETS event in May 2008, as well as a weaker tremor episode two months earlier. Using a beamforming technique, we are able to capture and track tremor activity with an unprecedented resolution from southern Puget Sound to the Strait of Juan de Fuca. The array technique reveals up to four times more duration of tremor compared to the conventional envelope cross-correlation method. Our findings suggest that NVT is not uniformly distributed on the subduction interface, and unveils several distinct patches that release much of the tremor moment. The patches appear to be devoid of ordinary earthquakes, and may indicate the heterogeneity in fault strength that affects the modes of stress release within the ETS zone.

  2. Quartz crystal microbalance (QCM) arrays for solution analysis

    SciTech Connect

    Schneider, T.W.; Frye, G.C.; Martin, S.J.; Kottenstette, R.J.; Osbourn, G.C.; Bartholomew, J.W.; Weisenbach, L.; Bohuszewicz, T.V.; Doughty, D.H.

    1997-01-01

    Quartz crystal microbalances (QCMs) are piezoelectric thickness-shear-mode resonators where the resonant frequency has long been known to vary linearly with the mass of rigid layers on the surface when the device is in contact with air. This reports summarizes the results from a Laboratory Directed Research and Development effort to use an array of QCMs to measure and identify volatile organic compounds (VOCs) in water solutions. A total of nine polymer-coated QCMs were tested with varying concentrations of twelve VOCs while frequency and damping voltage were measured. Results from these experiments were analyzed using a Sandia-developed pattern recognition technique called visually empirical region of influence (VERI) developed at Sandia. The VERI analyses of data with up to 16% and 50% sensitivity drifts were carried out on an array with six signals obtained from five sensors. The results indicate that better than 98% and 88% correct chemical recognition is maintained for the 16% and 50% drifts, respectively. These results indicate a good degree of robustness for these sensor films.

  3. Correlator data analysis for the array feed compensation system

    NASA Technical Reports Server (NTRS)

    Iijima, B.; Fort, D.; Vilnrotter, V.

    1994-01-01

    The real-time array feed compensation system is currently being evaluated at DSS 13. This system recovers signal-to-noise ratio (SNR) loss due to mechanical antenna deformations by using an array of seven Ka-band (33.7-GHz) horns to collect the defocused signal fields. The received signals are downconverted and digitized, in-phase and quadrature samples are generated, and combining weights are applied before the samples are recombined. It is shown that when optimum combining weights are employed, the SNR of the combined signal approaches the sum of the channel SNR's. The optimum combining weights are estimated directly from the signals in each channel by the Real-Time Block 2 (RTB2) correlator; since it was designed for very-long-baseline interferometer (VLBI) applications, it can process broadband signals as well as tones to extract the required weight estimates. The estimation algorithms for the optimum combining weights are described for tones and broadband sources. Data recorded in correlator output files can also be used off-line to estimate combiner performance by estimating the SNR in each channel, which was done for data taken during a Jupiter track at DSS 13.

  4. Array analysis of regional Pn and Pg wavefields from the Nevada Test Site

    SciTech Connect

    Leonard, M.A. . Dept. of Geology and Geophysics Lawrence Berkeley Lab., CA )

    1991-06-01

    Small-aperture high-frequency seismic arrays with dimensions of a few kilometers or less, can improve our ability to seismically monitor compliance with a low-yield Threshold Test Ban Treaty. This work studies the characteristics and effectiveness of array processing of the regional Pn and Pg wavefields generated by underground nuclear explosions at the Nevada Test Site. Waveform data from the explosion HARDIN (m{sub b} = 5.5) is recorded at a temporary 12-element, 3-component, 1.5 km-aperture array sited in an area of northern Nevada. The explosions VILLE (m{sub b} = 4.4) and SALUT (m{sub b} = 5.5) are recorded at two arrays sited in the Mojave desert, one a 96-element vertical-component 7 km-aperture array and the other a 155-element vertical-component 4 km-aperture array. Among the mean spectra for the m{sub b} = 5.5 events there are significant differences in low-frequency spectral amplitudes between array sites. The spectra become nearly identical beyond about 6 Hz. Spectral ratios are used to examine seismic source properties and the partitioning of energy between Pn and Pg. Frequency-wavenumber analysis at the 12-element array is used to obtain estimates of signal gain, phase velocity, and source azimuth. This analysis reveals frequency-dependent biases in velocity and azimuth of the coherent Pn and Pg arrivals. Signal correlation, the principal factor governing array performance, is examined in terms of spatial coherence estimates. The coherence is found to vary between the three sites. In all cases the coherence of Pn is greater than that for Pg. 81 refs., 92 figs., 5 tabs.

  5. Performance Analysis of a Cost-Effective Electret Condenser Microphone Directional Array

    NASA Technical Reports Server (NTRS)

    Humphreys, William M., Jr.; Gerhold, Carl H.; Zuckerwar, Allan J.; Herring, Gregory C.; Bartram, Scott M.

    2003-01-01

    Microphone directional array technology continues to be a critical part of the overall instrumentation suite for experimental aeroacoustics. Unfortunately, high sensor cost remains one of the limiting factors in the construction of very high-density arrays (i.e., arrays containing several hundred channels or more) which could be used to implement advanced beamforming algorithms. In an effort to reduce the implementation cost of such arrays, the authors have undertaken a systematic performance analysis of a prototype 35-microphone array populated with commercial electret condenser microphones. An ensemble of microphones coupling commercially available electret cartridges with passive signal conditioning circuitry was fabricated for use with the Langley Large Aperture Directional Array (LADA). A performance analysis consisting of three phases was then performed: (1) characterize the acoustic response of the microphones via laboratory testing and calibration, (2) evaluate the beamforming capability of the electret-based LADA using a series of independently controlled point sources in an anechoic environment, and (3) demonstrate the utility of an electret-based directional array in a real-world application, in this case a cold flow jet operating at high subsonic velocities. The results of the investigation revealed a microphone frequency response suitable for directional array use over a range of 250 Hz - 40 kHz, a successful beamforming evaluation using the electret-populated LADA to measure simple point sources at frequencies up to 20 kHz, and a successful demonstration using the array to measure noise generated by the cold flow jet. This paper presents an overview of the tests conducted along with sample data obtained from those tests.

  6. Tissue matrix arrays for high throughput screening and systems analysis of cell function

    PubMed Central

    Beachley, Vince Z.; Wolf, Matthew T.; Sadtler, Kaitlyn; Manda, Srikanth S.; Jacobs, Heather; Blatchley, Michael; Bader, Joel S.; Pandey, Akhilesh; Pardoll, Drew; Elisseeff, Jennifer H.

    2015-01-01

    Cell and protein arrays have demonstrated remarkable utility in the high-throughput evaluation of biological responses; however, they lack the complexity of native tissue and organs. Here, we describe tissue extracellular matrix (ECM) arrays for screening biological outputs and systems analysis. We spotted processed tissue ECM particles as two-dimensional arrays or incorporated them with cells to generate three-dimensional cell-matrix microtissue arrays. We then investigated the response of human stem, cancer, and immune cells to tissue ECM arrays originating from 11 different tissues, and validated the 2D and 3D arrays as representative of the in vivo microenvironment through quantitative analysis of tissue-specific cellular responses, including matrix production, adhesion and proliferation, and morphological changes following culture. The biological outputs correlated with tissue proteomics, and network analysis identified several proteins linked to cell function. Our methodology enables broad screening of ECMs to connect tissue-specific composition with biological activity, providing a new resource for biomaterials research and translation. PMID:26480475

  7. Equivalent circuit-based analysis of CMUT cell dynamics in arrays.

    PubMed

    Oguz, H K; Atalar, Abdullah; Köymen, Hayrettin

    2013-05-01

    Capacitive micromachined ultrasonic transducers (CMUTs) are usually composed of large arrays of closely packed cells. In this work, we use an equivalent circuit model to analyze CMUT arrays with multiple cells. We study the effects of mutual acoustic interactions through the immersion medium caused by the pressure field generated by each cell acting upon the others. To do this, all the cells in the array are coupled through a radiation impedance matrix at their acoustic terminals. An accurate approximation for the mutual radiation impedance is defined between two circular cells, which can be used in large arrays to reduce computational complexity. Hence, a performance analysis of CMUT arrays can be accurately done with a circuit simulator. By using the proposed model, one can very rapidly obtain the linear frequency and nonlinear transient responses of arrays with an arbitrary number of CMUT cells. We performed several finite element method (FEM) simulations for arrays with small numbers of cells and showed that the results are very similar to those obtained by the equivalent circuit model. PMID:23661137

  8. Design, optimization, and analysis of a self-deploying PV tent array

    NASA Technical Reports Server (NTRS)

    Collozza, Anthony J.

    1991-01-01

    A tent shaped PV array was designed and the design was optimized for maximum specific power. In order to minimize output power variation a tent angle of 60 deg was chosen. Based on the chosen tent angle an array structure was designed. The design considerations were minimal deployment time, high reliability, and small stowage volume. To meet these considerations the array was chosen to be self-deployable, form a compact storage configuration, using a passive pressurized gas deployment mechanism. Each structural component of the design was analyzed to determine the size necessary to withstand the various forces to which it would be subjected. Through this analysis the component weights were determined. An optimization was performed to determine the array dimensions and blanket geometry which produce the maximum specific power for a given PV blanket. This optimization was performed for both lunar and Martian environmental conditions. Other factors such as PV blanket types, structural material, and wind velocity (for Mars array), were varied to determine what influence they had on the design point. The performance specifications for the array at both locations and with each type of PV blanket were determined. These specifications were calculated using the Arimid fiber composite as the structural material. The four PV blanket types considered were silicon, GaAs/Ge, GaAsCLEFT, and amorphous silicon. The specifications used for each blanket represented either present day or near term technology. For both the Moon and Mars the amorphous silicon arrays produced the highest specific power.

  9. Design, optimization, and analysis of a self-deploying PV tent array

    NASA Astrophysics Data System (ADS)

    Collozza, Anthony J.

    1991-06-01

    A tent shaped PV array was designed and the design was optimized for maximum specific power. In order to minimize output power variation a tent angle of 60 deg was chosen. Based on the chosen tent angle an array structure was designed. The design considerations were minimal deployment time, high reliability, and small stowage volume. To meet these considerations the array was chosen to be self-deployable, form a compact storage configuration, using a passive pressurized gas deployment mechanism. Each structural component of the design was analyzed to determine the size necessary to withstand the various forces to which it would be subjected. Through this analysis the component weights were determined. An optimization was performed to determine the array dimensions and blanket geometry which produce the maximum specific power for a given PV blanket. This optimization was performed for both lunar and Martian environmental conditions. Other factors such as PV blanket types, structural material, and wind velocity (for Mars array), were varied to determine what influence they had on the design point. The performance specifications for the array at both locations and with each type of PV blanket were determined. These specifications were calculated using the Arimid fiber composite as the structural material. The four PV blanket types considered were silicon, GaAs/Ge, GaAsCLEFT, and amorphous silicon. The specifications used for each blanket represented either present day or near term technology. For both the Moon and Mars the amorphous silicon arrays produced the highest specific power.

  10. Array-CGH Analysis Suggests Genetic Heterogeneity in Rhombencephalosynapsis

    PubMed Central

    Démurger, F.; Pasquier, L.; Dubourg, C.; Dupé, V.; Gicquel, I.; Evain, C.; Ratié, L.; Jaillard, S.; Beri, M.; Leheup, B.; Lespinasse, J.; Martin-Coignard, D.; Mercier, S.; Quelin, C.; Loget, P.; Marcorelles, P.; Laquerrière, A.; Bendavid, C.; Odent, S.; David, V.

    2013-01-01

    Rhombencephalosynapsis is an uncommon, but increasingly recognized, cerebellar malformation defined as vermian agenesis with fusion of the hemispheres. The embryologic and genetic mechanisms involved are still unknown, and to date, no animal models are available. In the present study, we used Agilent oligonucleotide arrays in a large series of 57 affected patients to detect candidate genes. Four different unbalanced rearrangements were detected: a 16p11.2 deletion, a 14q12q21.2 deletion, an unbalanced translocation t(2p;10q), and a 16p13.11 microdeletion containing 2 candidate genes. These genes were further investigated by sequencing and in situ hybridization. This first microarray screening of a rhombencephalosynapsis series suggests that there may be heterogeneous genetic causes. PMID:24167461

  11. Nanomolar Trace Metal Analysis of Copper at Gold Microband Arrays

    NASA Astrophysics Data System (ADS)

    Wahl, A.; Dawson, K.; Sassiat, N.; Quinn, A. J.; O'Riordan, A.

    2011-08-01

    This paper describes the fabrication and electrochemical characterization of gold microband electrode arrays designated as a highly sensitive sensor for trace metal detection of copper in drinking water samples. Gold microband electrodes have been routinely fabricated by standard photolithographic methods. Electrochemical characterization were conducted in 0.1 M H2SO4 and found to display characteristic gold oxide formation and reduction peaks. The advantages of gold microband electrodes as trace metal sensors over currently used methods have been investigated by employing under potential deposition anodic stripping voltammetry (UPD-ASV) in Cu2+ nanomolar concentrations. Linear correlations were observed for increasing Cu2+ concentrations from which the concentration of an unknown sample of drinking water was estimated. The results obtained for the estimation of the unknown trace copper concentration in drinking was in good agreement with expected values.

  12. Mir Cooperative Solar Array flight performance data and computational analysis

    SciTech Connect

    Kerslake, T.W.; Hoffman, D.J.

    1997-12-31

    The Mir Cooperative Solar Array (MCSA) was developed jointly by the United States (US) and Russia to provide approximately 6 kW of photovoltaic power to the Russian space station Mir. The MCSA was launched to Mir in November 1995 and installed on the Kvant-1 module in May 1996. Since the MCSA photovoltaic panel modules (PPMs) are nearly identical to those of the International Space Station (ISS) photovoltaic arrays, MCSA operation offered an opportunity to gather multi-year performance data on this technology prior to its implementation on ISS. Two specially designed test sequences were executed in June and December 1996 to measure MCSA performance. Each test period encompassed 3 orbital revolutions whereby the current produced by the MCSA channels was measured. The temperature of MCSA PPMs was also measured. To better interpret the MCSA flight data, a dedicated FORTRAN computer code was developed to predict the detailed thermal-electrical performance of the MCSA. Flight data compared very favorably with computational performance predictions. This indicated that the MCSA electrical performance was fully meeting pre-flight expectations. There were no measurable indications of unexpected or precipitous MCSA performance degradation due to contamination or other causes after 7 months of operation on orbit. Power delivered to the Mir bus was lower than desired as a consequence of the retrofitted power distribution cabling. The strong correlation of experimental and computational results further bolsters the confidence level of performance codes used in critical ISS electric power forecasting. In this paper, MCSA flight performance tests are described as well as the computational modeling behind the performance predictions.

  13. Mir Cooperative Solar Array Flight Performance Data and Computational Analysis

    NASA Technical Reports Server (NTRS)

    Kerslake, Thomas W.; Hoffman, David J.

    1997-01-01

    The Mir Cooperative Solar Array (MCSA) was developed jointly by the United States (US) and Russia to provide approximately 6 kW of photovoltaic power to the Russian space station Mir. The MCSA was launched to Mir in November 1995 and installed on the Kvant-1 module in May 1996. Since the MCSA photovoltaic panel modules (PPMs) are nearly identical to those of the International Space Station (ISS) photovoltaic arrays, MCSA operation offered an opportunity to gather multi-year performance data on this technology prior to its implementation on ISS. Two specially designed test sequences were executed in June and December 1996 to measure MCSA performance. Each test period encompassed 3 orbital revolutions whereby the current produced by the MCSA channels was measured. The temperature of MCSA PPMs was also measured. To better interpret the MCSA flight data, a dedicated FORTRAN computer code was developed to predict the detailed thermal-electrical performance of the MCSA. Flight data compared very favorably with computational performance predictions. This indicated that the MCSA electrical performance was fully meeting pre-flight expectations. There were no measurable indications of unexpected or precipitous MCSA performance degradation due to contamination or other causes after 7 months of operation on orbit. Power delivered to the Mir bus was lower than desired as a consequence of the retrofitted power distribution cabling. The strong correlation of experimental and computational results further bolsters the confidence level of performance codes used in critical ISS electric power forecasting. In this paper, MCSA flight performance tests are described as well as the computational modeling behind the performance predictions.

  14. A multifunctional microfluidic droplet-array chip for analysis by electrospray ionization mass spectrometry.

    PubMed

    Su, Yuan; Zhu, Ying; Fang, Qun

    2013-05-21

    This paper describes a multifunctional semi-closed droplet-array chip coupled with electrospray ionization mass spectrometry (ESI-MS) detection for multiple sample pretreatment and analysis. A novel interfacing method for coupling droplet system with ESI-MS was proposed using a sampling probe-two-dimensional (2D) droplet-array strategy. The 2D droplet-array system was composed of an 8 × 8 microwell array chip for droplet storage and a layer of oil covering the droplets served as a "virtual wall" to avoid droplet evaporation or cross-contamination. An L-shaped capillary was adopted as the interface of the droplet array and ESI-MS, using its inlet end as a sampling probe for droplets and its outlet with a tip size of ~20 μm as an electrospray emitter, without the need for any droplet extraction device. The droplet analysis was performed by moving the droplet-array chip to allow the capillary sampling probe to sequentially enter into the droplets through the oil and introduce the sample solution into the capillary emitter for MS detection. The MS analysis time for each droplet sample was 40 s with a sample consumption of ca. 13 nL. A good repeatability of 5.7% (RSD, n = 9) was obtained for 10(-6) M reserpine droplet analysis. The uses of the semi-closed 2D droplet array and off-line interfacing mode provide the system with the substantial flexibility and controllability in droplet indexing, multi-step manipulating, and on-demand sampling for MS analysis. We applied the present system in multi-step pretreatment and identification of small amounts of proteomic samples of myoglobin and cytochrome C, including in-droplet protein reduction, alkylation, digestion, and purification based on solid-phase extraction, matrix modification, sample droplet introduction under flow injection mode, and ESI-MS detection. PMID:23525283

  15. Theory and design of compact hybrid microphone arrays on two-dimensional planes for three-dimensional soundfield analysis.

    PubMed

    Chen, Hanchi; Abhayapala, Thushara D; Zhang, Wen

    2015-11-01

    Soundfield analysis based on spherical harmonic decomposition has been widely used in various applications; however, a drawback is the three-dimensional geometry of the microphone arrays. In this paper, a method to design two-dimensional planar microphone arrays that are capable of capturing three-dimensional (3D) spatial soundfields is proposed. Through the utilization of both omni-directional and first order microphones, the proposed microphone array is capable of measuring soundfield components that are undetectable to conventional planar omni-directional microphone arrays, thus providing the same functionality as 3D arrays designed for the same purpose. Simulations show that the accuracy of the planar microphone array is comparable to traditional spherical microphone arrays. Due to its compact shape, the proposed microphone array greatly increases the feasibility of 3D soundfield analysis techniques in real-world applications. PMID:26627782

  16. Teleseismic array analysis of upper mantle compressional velocity structure. Ph.D. Thesis

    NASA Technical Reports Server (NTRS)

    Walck, M. C.

    1984-01-01

    Relative array analysis of upper mantle lateral velocity variations in southern California, analysis techniques for dense data profiles, the P-wave upper mantle structure beneath an active spreading center: the Gulf of California, and the upper mantle under the Cascade ranges: a comparison with the Gulf of California are presented.

  17. Glycerol-treated nuclear suspensions--an efficient preservation method for flow cytometric analysis of plant samples.

    PubMed

    Kolář, Filip; Lučanová, Magdalena; Těšitel, Jakub; Loureiro, João; Suda, Jan

    2012-02-01

    Flow cytometry (FCM) has been widely used in plant science to determine the amount of nuclear DNA, either in absolute units or in relative terms, as an indicator of ploidy. The requirement for fresh material in some applications, however, limits the value of FCM in field research, including plant biosystematics, ecology and population biology. Dried plant samples have proven to be a suitable alternative in some cases (large-scale ploidy screening) although tissue dehydration is often associated with a decrease in the quality of FCM analysis. The present study tested, using time-scale laboratory and in situ field experiments, the applicability of glycerol-treated nuclear suspension for DNA flow cytometry. We demonstrate that plant nuclei preserved in ice-cold buffer + glycerol solution remain intact for at least a few weeks and provide estimates of nuclear DNA content that are highly comparable and of similar quality to those obtained from fresh tissue. The protocol is compatible with both DAPI and propidium iodide staining, and allows not only the determination of ploidy level but also genome size in absolute units. Despite its higher laboriousness, glycerol-preserved nuclei apparently represent the most reliable way of sample preservation for genome size research. We assume that the protocol will provide a vital alternative to other preservation methods, especially when stringent criteria on the quality of FCM analysis are required. PMID:22362177

  18. Analysis of costs of gallium arsenide and silicon solar arrays for space power applications

    NASA Technical Reports Server (NTRS)

    Jefferies, K. S.

    1981-01-01

    A parametric analysis was performed to compare the costs of silicon and gallium arsenide arrays for Earth orbital missions. The missions included electric power in low Earth orbit (LEO), electric power in geosynchronous Earth orbit (GEO), and power for electric propulsion of a LEO to GEO orbit transfer mission. Inputs to the analysis for all missions included launch and purchase costs of the array. For the orbit transfer mission, the launch and purchase costs of the electric propulsion system were added. Radiation flux as a function of altitude and rediation tolerance as a function of cell type were used to determine power degradation for each mission. Curves were generated that show the sensitivity of launch-array cost and total mission cost to a variety of input parameters for each mission. These parameters included mission duration, cover glass thickness, array specific cost, array specific mass, and solar cell efficiency. Solar concentration was considered and the sensitivities of cost to concentration ratio, concentrator costs, and concentrator mass were also evaluated. Results indicate that solar cell development should give a high priority to reducing array costs and that the development of low cost, lightweight, solar concentrators should be pursued.

  19. Ion Trap Array-Based Systems And Methods For Chemical Analysis

    DOEpatents

    Whitten, William B [Oak Ridge, TN; Ramsey, J Michael [Knoxville, TN

    2005-08-23

    An ion trap-based system for chemical analysis includes an ion trap array. The ion trap array includes a plurality of ion traps arranged in a 2-dimensional array for initially confining ions. Each of the ion traps comprise a central electrode having an aperture, a first and second insulator each having an aperture sandwiching the central electrode, and first and second end cap electrodes each having an aperture sandwiching the first and second insulator. A structure for simultaneously directing a plurality of different species of ions out from the ion traps is provided. A spectrometer including a detector receives and identifies the ions. The trap array can be used with spectrometers including time-of-flight mass spectrometers and ion mobility spectrometers.

  20. A cross-reactive sensor array for the fluorescence qualitative analysis of heavy metal ions.

    PubMed

    Kang, Huaizhi; Lin, Liping; Rong, Mingcong; Chen, Xi

    2014-11-01

    A cross-reactive sensor array using mercaptopropionic acid modified cadmium telluride (CdTe), glutathione modified CdTe, poly(methacrylic acid) modified silver nanoclusters, bovine serum albumin modified gold nanoclusters, rhodamine derivative and calcein blue as fluorescent indicators has been designed for the detection of seven heavy metal ions (Ag(+), Hg(2+), Pb(2+), Cu(2+), Cr(3+), Mn(2+) and Cd(2+)). The discriminatory capacity of the sensor array to different heavy metal ions in different pH solutions has been tested and the results have been analyzed with linear discriminant analysis. Results showed that the sensor array could be used to qualitatively analyze the selected heavy metal ions. The array performance was also evaluated in the identification of known and unknown samples and the preliminary results suggested the promising practicability of the designed sensor assay. PMID:25127598

  1. Dielectric Constant of Suspensions

    NASA Astrophysics Data System (ADS)

    Mendelson, Kenneth S.; Ackmann, James J.

    1997-03-01

    We have used a finite element method to calculate the dielectric constant of a cubic array of spheres. Extensive calculations support preliminary conclusions reported previously (K. Mendelson and J. Ackmann, Bull. Am. Phys. Soc. 41), 657 (1996).. At frequencies below 100 kHz the real part of the dielectric constant (ɛ') shows oscillations as a function of the volume fraction of suspension. These oscillations disappear at low conductivities of the suspending fluid. Measurements of the dielectric constant (J. Ackmann, et al., Ann. Biomed. Eng. 24), 58 (1996). (H. Fricke and H. Curtis, J. Phys. Chem. 41), 729 (1937). are not sufficiently sensitive to show oscillations but appear to be consistent with the theoretical results.

  2. Young's modulus and SEM analysis of leg bones exposed to simulated microgravity by hind limb suspension (HLS)

    SciTech Connect

    Patel, Niravkumar D.; Mehta, Rahul; Ali, Nawab; Soulsby, Michael; Chowdhury, Parimal

    2013-04-19

    The aim of this study was to determine composition of the leg bone tissue of rats that were exposed to simulated microgravity by Hind-Limb Suspension (HLS) by tail for one week. The leg bones were cross sectioned, cleaned of soft tissues, dried and sputter coated, and then placed horizontally on the stage of a Scanning Electron Microscope (SEM) for analysis. Interaction of a 17.5 keV electron beam, incident from the vertical direction on the sample, generated images using two detectors. X-rays emitted from the sample during electron bombardment were measured with an Energy Dispersive Spectroscopy (EDS) feature of SEM using a liquid-nitrogen cooled Si(Li) detector with a resolution of 144 eV at 5.9 keV ({sub 25}Mn K{sub {alpha}} x-ray). K{sub {alpha}}- x-rays from carbon, oxygen, phosphorus and calcium formed the major peaks in the spectrum. Relative percentages of these elements were determined using a software that could also correct for ZAF factors namely Z(atomic number), A(X-ray absorption) and F(characteristic fluorescence). The x-rays from the control groups and from the experimental (HLS) groups were analyzed on well-defined parts (femur, tibia and knee) of the leg bone. The SEM analysis shows that there are definite changes in the hydroxyl or phosphate group of the main component of the bone structure, hydroxyapatite [Ca{sub 10}(PO{sub 4}){sub 6}(OH){sub 2}], due to hind limb suspension. In a separate experiment, entire leg bones (both from HLS and control rats) were subjected to mechanical stress by mean of a variable force. The stress vs. strain graph was fitted with linear and polynomial function, and the parameters reflecting the mechanical strength of the bone, under increasing stress, were calculated. From the slope of the linear part of the graph the Young's modulus for HLS bones were calculated and found to be 2.49 times smaller than those for control bones.

  3. Young's modulus and SEM analysis of leg bones exposed to simulated microgravity by hind limb suspension (HLS)

    NASA Astrophysics Data System (ADS)

    Patel, Niravkumar D.; Mehta, Rahul; Ali, Nawab; Soulsby, Michael; Chowdhury, Parimal

    2013-04-01

    The aim of this study was to determine composition of the leg bone tissue of rats that were exposed to simulated microgravity by Hind-Limb Suspension (HLS) by tail for one week. The leg bones were cross sectioned, cleaned of soft tissues, dried and sputter coated, and then placed horizontally on the stage of a Scanning Electron Microscope (SEM) for analysis. Interaction of a 17.5 keV electron beam, incident from the vertical direction on the sample, generated images using two detectors. X-rays emitted from the sample during electron bombardment were measured with an Energy Dispersive Spectroscopy (EDS) feature of SEM using a liquid-nitrogen cooled Si(Li) detector with a resolution of 144 eV at 5.9 keV (25Mn Kα x-ray). Kα- x-rays from carbon, oxygen, phosphorus and calcium formed the major peaks in the spectrum. Relative percentages of these elements were determined using a software that could also correct for ZAF factors namely Z(atomic number), A(X-ray absorption) and F(characteristic fluorescence). The x-rays from the control groups and from the experimental (HLS) groups were analyzed on well-defined parts (femur, tibia and knee) of the leg bone. The SEM analysis shows that there are definite changes in the hydroxyl or phosphate group of the main component of the bone structure, hydroxyapatite [Ca10(PO4)6(OH)2], due to hind limb suspension. In a separate experiment, entire leg bones (both from HLS and control rats) were subjected to mechanical stress by mean of a variable force. The stress vs. strain graph was fitted with linear and polynomial function, and the parameters reflecting the mechanical strength of the bone, under increasing stress, were calculated. From the slope of the linear part of the graph the Young's modulus for HLS bones were calculated and found to be 2.49 times smaller than those for control bones.

  4. Two dimensional barcode-inspired automatic analysis for arrayed microfluidic immunoassays

    PubMed Central

    Zhang, Yi; Qiao, Lingbo; Ren, Yunke; Wang, Xuwei; Gao, Ming; Tang, Yunfang; Jeff Xi, Jianzhong; Fu, Tzung-May; Jiang, Xingyu

    2013-01-01

    The usability of many high-throughput lab-on-a-chip devices in point-of-care applications is currently limited by the manual data acquisition and analysis process, which are labor intensive and time consuming. Based on our original design in the biochemical reactions, we proposed here a universal approach to perform automatic, fast, and robust analysis for high-throughput array-based microfluidic immunoassays. Inspired by two-dimensional (2D) barcodes, we incorporated asymmetric function patterns into a microfluidic array. These function patterns provide quantitative information on the characteristic dimensions of the microfluidic array, as well as mark its orientation and origin of coordinates. We used a computer program to perform automatic analysis for a high-throughput antigen/antibody interaction experiment in 10 s, which was more than 500 times faster than conventional manual processing. Our method is broadly applicable to many other microchannel-based immunoassays. PMID:24404030

  5. Computational analysis of vertical axis wind turbine arrays

    NASA Astrophysics Data System (ADS)

    Bremseth, J.; Duraisamy, K.

    2016-03-01

    Canonical problems involving single, pairs, and arrays of vertical axis wind turbines (VAWTs) are investigated numerically with the objective of understanding the underlying flow structures and their implications on energy production. Experimental studies by Dabiri (J Renew Sustain Energy 3, 2011) suggest that VAWTs demand less stringent spacing requirements than their horizontal axis counterparts and additional benefits may be obtained by optimizing the placement and rotational direction of VAWTs. The flowfield of pairs of co-/counter-rotating VAWTs shows some similarities with pairs of cylinders in terms of wake structure and vortex shedding. When multiple VAWTs are placed in a column, the extent of the wake is seen to spread further downstream, irrespective of the direction of rotation of individual turbines. However, the aerodynamic interference between turbines gives rise to regions of excess momentum between the turbines which lead to significant power augmentations. Studies of VAWTs arranged in multiple columns show that the downstream columns can actually be more efficient than the leading column, a proposition that could lead to radical improvements in wind farm productivity.

  6. Virus inactivation on hard surfaces or in suspension by chemical disinfectants: systematic review and meta-analysis of norovirus surrogates.

    PubMed

    Hoelzer, K; Fanaselle, W; Pouillot, R; Van Doren, J M; Dennis, S

    2013-06-01

    Norovirus (NoV) infections are the leading cause of foodborne illness in the United States. Effective disinfection is important for controlling outbreaks caused by this highly infectious virus but can be difficult to achieve because NoV is very resistant to many common disinfection protocols. The inability of human NoV to replicate in tissue culture complicates NoV research, generally necessitating genome copy quantification, the use of surrogate viruses, or the use of other substitutes such as virus-like particles. To date, comprehensive comparisons among NoV surrogates and between surrogates and human NoV are missing, and it is not clear how best to extrapolate information from surrogate data. We conducted a systematic review and meta-analysis of comparisons of NoV surrogates with regard to their susceptibility to disinfection on hard surfaces or in suspension. Restricting our analysis to those studies in which two or more virus surrogates were compared allowed us to improve the signal-to-noise ratio in our analysis, similar to the epidemiological concept of matching. Using meta-analysis methods, our results indicate that hepatitis A virus, murine norovirus 1, and phage MS2 are significantly more resistant to disinfection than is feline calicivirus, but average differences in viral titer reduction appeared to be modest, 1.5 log PFU or less in all cases. None of the studies that compared surrogates and human NoV met our inclusion criteria, precluding a direct comparison between human NoV and NoV surrogates in this study. For all surrogates with sufficient data available to permit subgroup analyses, we detected strong evidence that the type of disinfectant impacted the relative susceptibility of the surrogates. Therefore, extrapolation of results between surrogates or from surrogates to human NoV must consider the type of disinfectant studied. PMID:23726196

  7. AVES: A high performance computer cluster array for the INTEGRAL satellite scientific data analysis

    NASA Astrophysics Data System (ADS)

    Federici, Memmo; Martino, Bruno Luigi; Ubertini, Pietro

    2012-07-01

    In this paper we describe a new computing system array, designed, built and now used at the Space Astrophysics and Planetary Institute (IAPS) in Rome, Italy, for the INTEGRAL Space Observatory scientific data analysis. This new system has become necessary in order to reduce the processing time of the INTEGRAL data accumulated during the more than 9 years of in-orbit operation. In order to fulfill the scientific data analysis requirements with a moderately limited investment the starting approach has been to use a `cluster' array of commercial quad-CPU computers, featuring the extremely large scientific and calibration data archive on line.

  8. Simplified seawater alkalinity analysis: Use of linear array spectrometers

    NASA Astrophysics Data System (ADS)

    Yao, Wensheng; Byrne, Robert H.

    1998-08-01

    Modified spectrophotometric procedures are presented for the determination of seawater total alkalinity using rapid scan linear array spectrometers. Continuous monitoring of solution pH allows titrations to be terminated at relatively high pH, whereby excess acid terms are very small. Excess acid concentrations are quantified using the sulfonephthalein indicators, bromocresol green and bromocresol purple. The outlined spectrophotometric procedures require no thermal equilibration of samples. Using bromocresol green, solution pH T ([H +] T in moles per kg of solution) is given as: pHT=4.2699+0.002578(35- S)+ log((R(25)-0.00131)/(2.3148-0.1299 R(25))) - log(1-0.001005S) and R(25)= R( t){1+0.00909(25- t)}, where 29⩽S⩽37, 13° C⩽t⩽32° C, and R( t) is the absorbance ratio ( A616/ A444) at temperature t and salinity S. Using bromocresol purple, the solution pH T is given as pH T=5.8182+0.00129(35- S)+log(( R(25)-0.00381)/(2.8729-0.05104 R(25))) and R(25)= R( t){1+0.01869(25- t)}, where 29⩽S⩽37, 13° C⩽t⩽32° C, and R( t)= A589/ A432. Alkalinity measurements using bromocresol purple had a precision on the order of 0.3 μmol kg -1 and were within 0.3-0.9 μmol kg -1 of the alkalinities of certified seawater reference materials.

  9. Multiplexed gold nanorod array biochip for multi-sample analysis.

    PubMed

    Wang, Yanyan; Tang, Liang

    2015-05-15

    Optical transduction of biological bindings based on localized surface plasmon resonance (LSPR) of gold nanorods (GNRs) is attractive for label-free biosensing. The aspect ratio (AR) dependence of LSPR band maxima inherently provides an ideal multiplex mechanism. GNRs of selected sizes can be combined to ensure distinct plasmon peaks in absorption spectrum. Monitoring the spectral shift at the dedicated peaks allows for simultaneous detection of the specific analyte. Here, we first transformed the GNR's multiplexed biosensing capability to a robust chip-based format. Specifically, nanorods of AR 2.6 and 4.5 were assembled onto thiol-terminated substrates, followed by functionalization of respective antibodies to construct a GNR multiplex biochip. As a model system, concentrations of human IgG and rabbit IgG were simultaneously measured by correlating red-shifts at distinct resonance peaks caused by specific target binding. The calibration curves exhibited linear relationship between the spectral shift and analyte amount. The sensing performance in multi-analyte mode correlated nicely with those for single analyte detection with minimal cross-reactivity. Moreover, mixed GNRs can be deposited in controllable array pattern on the glass chip to analyze numerous samples at the same time. Each GNRs dot functioned independently as a multiplexed plamonic sensor. Coupled with microplate reader, this GNR nanoarray chip can potentially result in large scale assay of samples concurrently while for each sample, a multi-analyte detection simultaneously if desired. The concept shown in this work is simple and versatile that will definitely be a new paradigm in high-throughput protein biochip development in the era of nano-biosensing. PMID:25127486

  10. Tandem gene arrays in Trypanosoma brucei: Comparative phylogenomic analysis of duplicate sequence variation

    PubMed Central

    Jackson, Andrew P

    2007-01-01

    Background The genome sequence of the protistan parasite Trypanosoma brucei contains many tandem gene arrays. Gene duplicates are created through tandem duplication and are expressed through polycistronic transcription, suggesting that the primary purpose of long, tandem arrays is to increase gene dosage in an environment where individual gene promoters are absent. This report presents the first account of the tandem gene arrays in the T. brucei genome, employing several related genome sequences to establish how variation is created and removed. Results A systematic survey of tandem gene arrays showed that substantial sequence variation existed across the genome; variation from different regions of an array often produced inconsistent phylogenetic affinities. Phylogenetic relationships of gene duplicates were consistent with concerted evolution being a widespread homogenising force. However, tandem duplicates were not usually identical; therefore, any homogenising effect was coincident with divergence among duplicates. Allelic gene conversion was detected using various criteria and was apparently able to both remove and introduce sequence variation. Tandem arrays containing structural heterogeneity demonstrated how sequence homogenisation and differentiation can occur within a single locus. Conclusion The use of multiple genome sequences in a comparative analysis of tandem gene arrays identified substantial sequence variation among gene duplicates. The distribution of sequence variation is determined by a dynamic balance of conservative and innovative evolutionary forces. Gene trees from various species showed that intraspecific duplicates evolve in concert, perhaps through frequent gene conversion, although this does not prevent sequence divergence, especially where structural heterogeneity physically separates a duplicate from its neighbours. In describing dynamics of sequence variation that have consequences beyond gene dosage, this survey provides a basis for

  11. Analysis and design of a leaky-wave EMC dipole array

    NASA Astrophysics Data System (ADS)

    Potharazu, Pavan K.; Jackson, David R.

    1992-08-01

    An analysis of an electromagnetically coupled (EMC) dipole array is presented, in which a microstrip line is coupled to an infinite periodic linear array of microstrip dipoles, arranged perpendicular to the line. The spectral-domain immitance method is used to obtain the periodic Green's function for the two-layered structure, and the method of moments with a Galerkin testing procedure is then used to enforce the electric field integral equation (EFIE) on the line and the dipole within a unit cell of the structure to obtain the determinantal equation for the unknown leaky-wave propagation constant. One of the interesting features of this analysis is the path of integration in the complex plane used to compute the moment method reactions, which must be partly on the improper sheet for the m = -1 space harmonic when it radiates in the forward direction. Measured radiation patterns for a 10-element EMC dipole array are presented and compared with the corresponding theoretical ones.

  12. A new soft x-ray pulse height analysis array in the HL-2A tokamak

    SciTech Connect

    Zhang, Y. P.; Liu Yi; Yang, J. W.; Song, X. Y.; Liao, M.; Li, X.; Yuan, G. L.; Yang, Q. W.; Duan, X. R.; Pan, C. H.

    2009-12-15

    A new soft x-ray pulse height analysis (PHA) array including nine independent subsystems, on basis of a nonconventional software multichannel analysis system and a silicon drift detector (SDD) linear array consisting of nine high performance SDD detectors, has been developed in the HL-2A tokamak. The use of SDD has greatly improved the measurement accuracy and the spatiotemporal resolutions of the soft x-ray PHA system. Since the ratio of peak to background counts obtained from the SDD PHA system is very high, p/b{>=}3000, the soft x-ray spectra measured by the SDD PHA system can approximatively be regarded as electron velocity distribution. The electron velocity distribution can be well derived in the pure ohmic and auxiliary heating discharges. The performance of the new soft x-ray PHA array and the first experimental results with some discussions are presented.

  13. Direct fluorescence analysis of genetic polymorphisms by hybridization with oligonucleotide arrays on glass supports.

    PubMed Central

    Guo, Z; Guilfoyle, R A; Thiel, A J; Wang, R; Smith, L M

    1994-01-01

    A simple and rapid method for the analysis of genetic polymorphisms has been developed using allele-specific oligonucleotide arrays bound to glass supports. Allele-specific oligonucleotides are covalently immobilized on glass slides in arrays of 3 mm spots. Genomic DNA is amplified by PCR using one fluorescently tagged primer oligonucleotide and one biotinylated primer oligonucleotide. The two complementary DNA strands are separated, the fluorescently tagged strand is hybridized to the support-bound oligonucleotide array, and the hybridization pattern is detected by fluorescence scanning. Multiple polymorphisms present in the PCR product may be detected in parallel. The effect of spacer length, surface density and hybridization conditions were evaluated, as was the relative efficacy of hybridization with single or double-stranded PCR products. The utility of the method was demonstrated in the parallel analysis of 5 point mutations from exon 4 of the human tyrosinase gene. Images PMID:7816638

  14. Analysis of radiometric signal in sedimentating suspension flow in open channel

    NASA Astrophysics Data System (ADS)

    Zych, Marcin; Hanus, Robert; Petryka, Leszek; Świsulski, Dariusz; Doktor, Marek; Mastej, Wojciech

    2015-05-01

    The article discusses issues related to the estimation of the sedimentating solid particles average flow velocity in an open channel using radiometric methods. Due to the composition of the compound, which formed water and diatomite, received data have a very weak signal to noise ratio. In the process analysis the known determining of the solid phase transportation time delay the classical cross-correlation function is the most reliable method. The use of advanced frequency analysis based on mutual spectral density function and wavelet transform of recorded signals allows a reduction of the noise contribution.

  15. Vertical nanowire arrays as a versatile platform for protein detection and analysis

    NASA Astrophysics Data System (ADS)

    Rostgaard, Katrine R.; Frederiksen, Rune S.; Liu, Yi-Chi C.; Berthing, Trine; Madsen, Morten H.; Holm, Johannes; Nygård, Jesper; Martinez, Karen L.

    2013-10-01

    Protein microarrays are valuable tools for protein assays. Reducing spot sizes from micro- to nano-scale facilitates miniaturization of platforms and consequently decreased material consumption, but faces inherent challenges in the reduction of fluorescent signals and compatibility with complex solutions. Here we show that vertical arrays of nanowires (NWs) can overcome several bottlenecks of using nanoarrays for extraction and analysis of proteins. The high aspect ratio of the NWs results in a large surface area available for protein immobilization and renders passivation of the surface between the NWs unnecessary. Fluorescence detection of proteins allows quantitative measurements and spatial resolution, enabling us to track individual NWs through several analytical steps, thereby allowing multiplexed detection of different proteins immobilized on different regions of the NW array. We use NW arrays for on-chip extraction, detection and functional analysis of proteins on a nano-scale platform that holds great promise for performing protein analysis on minute amounts of material. The demonstration made here on highly ordered arrays of indium arsenide (InAs) NWs is generic and can be extended to many high aspect ratio nanostructures.Protein microarrays are valuable tools for protein assays. Reducing spot sizes from micro- to nano-scale facilitates miniaturization of platforms and consequently decreased material consumption, but faces inherent challenges in the reduction of fluorescent signals and compatibility with complex solutions. Here we show that vertical arrays of nanowires (NWs) can overcome several bottlenecks of using nanoarrays for extraction and analysis of proteins. The high aspect ratio of the NWs results in a large surface area available for protein immobilization and renders passivation of the surface between the NWs unnecessary. Fluorescence detection of proteins allows quantitative measurements and spatial resolution, enabling us to track individual

  16. Tissue matrix arrays for high-throughput screening and systems analysis of cell function.

    PubMed

    Beachley, Vince Z; Wolf, Matthew T; Sadtler, Kaitlyn; Manda, Srikanth S; Jacobs, Heather; Blatchley, Michael R; Bader, Joel S; Pandey, Akhilesh; Pardoll, Drew; Elisseeff, Jennifer H

    2015-12-01

    Cell and protein arrays have demonstrated remarkable utility in the high-throughput evaluation of biological responses; however, they lack the complexity of native tissue and organs. Here we spotted tissue extracellular matrix (ECM) particles as two-dimensional (2D) arrays or incorporated them with cells to generate three-dimensional (3D) cell-matrix microtissue arrays. We then investigated the responses of human stem, cancer and immune cells to tissue ECM arrays originating from 11 different tissues. We validated the 2D and 3D arrays as representative of the in vivo microenvironment by means of quantitative analysis of tissue-specific cellular responses, including matrix production, adhesion and proliferation, and morphological changes after culture. The biological outputs correlated with tissue proteomics, and network analysis identified several proteins linked to cell function. Our methodology enables broad screening of ECMs to connect tissue-specific composition with biological activity, providing a new resource for biomaterials research and further understanding of regeneration and disease mechanisms. PMID:26480475

  17. Analysis of a parallel-arrayed power regulating system

    NASA Technical Reports Server (NTRS)

    Colburn, B. K.; Horton, H. M.; Honnell, M. A.

    1979-01-01

    A power regulation system incorporating n-parallel power supplies employing PWM switching regulators is studied. Analysis of individual unit operation and coupled-system parameter sensitivity is considered from an operations viewpoint. A detailed example is included to illustrate parallel system operation for 18 such units powered by solar-cell banks.

  18. Comprehensive exon array data processing method for quantitative analysis of alternative spliced variants

    PubMed Central

    Chen, Ping; Lepikhova, Tatiana; Hu, Yizhou; Monni, Outi; Hautaniemi, Sampsa

    2011-01-01

    Alternative splicing of pre-mRNA generates protein diversity. Dysfunction of splicing machinery and expression of specific transcripts has been linked to cancer progression and drug response. Exon microarray technology enables genome-wide quantification of expression levels of the majority of exons and facilitates the discovery of alternative splicing events. Analysis of exon array data is more challenging than the analysis of gene expression data and there is a need for reliable quantification of exons and alternatively spliced variants. We introduce a novel, computationally efficient methodology, Multiple Exon Array Preprocessing (MEAP), for exon array data pre-processing, analysis and visualization. We compared MEAP with existing pre-processing methods, and validation of six exons and two alternatively spliced variants with qPCR corroborated MEAP expression estimates. Analysis of exon array data from head and neck squamous cell carcinoma (HNSCC) cell lines revealed several transcripts associated with 11q13 amplification, which is related with decreased survival and metastasis in HNSCC patients. Our results demonstrate that MEAP produces reliable expression values at exon, alternatively spliced variant and gene levels, which allows generating novel experimentally testable predictions. PMID:21745820

  19. GENE ARRAY ANALYSIS OF THE VENTRAL PROSTATE IN RATS EXPOSED TO EITHER VINCLOZOLIN OR PROCYMIDONE

    EPA Science Inventory

    GENE ARRAY ANALYSIS OF THE VENTRAL PROSTATE IN RATS EXPOSED TO EITHER VINCLOZOLIN OR PROCYMIDONE. MB Rosen, VS Wilson, JE Schmid, and LE Gray Jr. US EPA, ORD, NHEERL, RTP, NC.

    Vinclozolin (Vi) and procymidone (Pr) are antiandrogenic fungicides. While changes in gene expr...

  20. Finite-difference time-domain analysis of light propagation in cholesteric liquid crystalline droplet array

    NASA Astrophysics Data System (ADS)

    Yamamoto, Kaho; Iwai, Yosuke; Uchida, Yoshiaki; Nishiyama, Norikazu

    2016-08-01

    We numerically analyzed the light propagation in cholesteric liquid crystalline (CLC) droplet array by the finite-difference time-domain (FDTD) method. The FDTD method successfully reproduced the experimental light path observed in the complicated photonic structure of the CLC droplet array more accurately than the analysis of CLC droplets by geometric optics with Bragg condition, and this method help us understand the polarization of the propagating light waves. The FDTD method holds great promise for the design of various photonic devices composed of curved photonic materials like CLC droplets and microcapsules.

  1. Discrimination of honeys using colorimetric sensor arrays, sensory analysis and gas chromatography techniques.

    PubMed

    Tahir, Haroon Elrasheid; Xiaobo, Zou; Xiaowei, Huang; Jiyong, Shi; Mariod, Abdalbasit Adam

    2016-09-01

    Aroma profiles of six honey varieties of different botanical origins were investigated using colorimetric sensor array, gas chromatography-mass spectrometry (GC-MS) and descriptive sensory analysis. Fifty-eight aroma compounds were identified, including 2 norisoprenoids, 5 hydrocarbons, 4 terpenes, 6 phenols, 7 ketones, 9 acids, 12 aldehydes and 13 alcohols. Twenty abundant or active compounds were chosen as key compounds to characterize honey aroma. Discrimination of the honeys was subsequently implemented using multivariate analysis, including hierarchical clustering analysis (HCA) and principal component analysis (PCA). Honeys of the same botanical origin were grouped together in the PCA score plot and HCA dendrogram. SPME-GC/MS and colorimetric sensor array were able to discriminate the honeys effectively with the advantages of being rapid, simple and low-cost. Moreover, partial least squares regression (PLSR) was applied to indicate the relationship between sensory descriptors and aroma compounds. PMID:27041295

  2. Removing unwanted variation in a differential methylation analysis of Illumina HumanMethylation450 array data

    PubMed Central

    Maksimovic, Jovana; Gagnon-Bartsch, Johann A.; Speed, Terence P.; Oshlack, Alicia

    2015-01-01

    Due to their relatively low-cost per sample and broad, gene-centric coverage of CpGs across the human genome, Illumina's 450k arrays are widely used in large scale differential methylation studies. However, by their very nature, large studies are particularly susceptible to the effects of unwanted variation. The effects of unwanted variation have been extensively documented in gene expression array studies and numerous methods have been developed to mitigate these effects. However, there has been much less research focused on the appropriate methodology to use for accounting for unwanted variation in methylation array studies. Here we present a novel 2-stage approach using RUV-inverse in a differential methylation analysis of 450k data and show that it outperforms existing methods. PMID:25990733

  3. An analysis of three new infrasound arrays around Kīlauea Volcano

    USGS Publications Warehouse

    Thelen, Weston A.; Cooper, Jennifer

    2015-01-01

    A network of three new infrasound station arrays was installed around Kīlauea Volcano between July 2012 and September 2012, and a preliminary analysis of open-vent monitoring has been completed by Hawaiian Volcano Observatory (HVO). Infrasound is an emerging monitoring method in volcanology that detects perturbations in atmospheric pressure at frequencies below 20 Hz, which can result from volcanic events that are not always observed optically or thermally. Each array has the capability to detect various infrasound events as small as 0.05 Pa as measured at the array site. The infrasound monitoring network capabilities are demonstrated through case studies of rockfalls, pit collapses, and rise-fall cycles at Halema'uma'u Crater and Pu'u 'Ōʻō.

  4. An integrated analysis-synthesis array system for spatial sound fields.

    PubMed

    Bai, Mingsian R; Hua, Yi-Hsin; Kuo, Chia-Hao; Hsieh, Yu-Hao

    2015-03-01

    An integrated recording and reproduction array system for spatial audio is presented within a generic framework akin to the analysis-synthesis filterbanks in discrete time signal processing. In the analysis stage, a microphone array "encodes" the sound field by using the plane-wave decomposition. Direction of arrival of plane-wave components that comprise the sound field of interest are estimated by multiple signal classification. Next, the source signals are extracted by using a deconvolution procedure. In the synthesis stage, a loudspeaker array "decodes" the sound field by reconstructing the plane-wave components obtained in the analysis stage. This synthesis stage is carried out by pressure matching in the interior domain of the loudspeaker array. The deconvolution problem is solved by truncated singular value decomposition or convex optimization algorithms. For high-frequency reproduction that suffers from the spatial aliasing problem, vector panning is utilized. Listening tests are undertaken to evaluate the deconvolution method, vector panning, and a hybrid approach that combines both methods to cover frequency ranges below and above the spatial aliasing frequency. Localization and timbral attributes are considered in the subjective evaluation. The results show that the hybrid approach performs the best in overall preference. In addition, there is a trade-off between reproduction performance and the external radiation. PMID:25786949

  5. Clearance Analysis of Node 3 Aft CBM to the Stowed FGB Solar Array

    NASA Technical Reports Server (NTRS)

    Liddle, Donn

    2014-01-01

    In early 2011, the ISS Vehicle Configuration Office began considering the relocation of the Permanent Multipurpose Module (PMM) to the aft facing Common Berthing Mechanism (CBM) on Node 3 to open a berthing location for visiting vehicles on the Node 1 nadir CBM. In this position, computer-aided design (CAD) models indicated that the aft end of the PMM would be only a few inches from the stowed Functional Cargo Block (FGB) port solar array. To validate the CAD model clearance analysis, in the late summer of 2011 the Image Science and Analysis Group (ISAG) was asked to determine the true geometric relationship between the on-orbit aft facing Node 3 CBM and the FGB port solar array. The desired measurements could be computed easily by photogrammetric analysis if current imagery of the ISS hardware were obtained. Beginning in the fall of 2011, ISAG used the Dynamic Onboard Ubiquitous Graphics (DOUG) program to design a way to acquire imagery of the aft face of Node 3, the aft end-cone of Node 1, the port side of pressurized mating adapter 1 (PMA1), and the port side of the FGB out to the tip of the port solar array using cameras on the Space Station Remote Manipulator System (SSRMS). This was complicated by the need to thread the SSRMS under the truss, past Node 3 and the Cupola, and into the space between the aft side of Node 3 and the FGB solar array to acquire more than 100 images from multiple positions. To minimize the number of SSRMS movements, the Special Purpose Dexterous Manipulator (SPDM) would be attached to the SSRMS. This would make it possible to park the SPDM in one position and acquire multiple images by changing the viewing orientation of the SPDM body cameras using the pan/tilt units on which the cameras are mounted. Using this implementation concept, ISAG identified four SSRMS/SPDM positions from which all of the needed imagery could be acquired. Based on a photogrammetric simulation, it was estimated that the location of the FGB solar array could be

  6. Efficient Analysis of Systems Biology Markup Language Models of Cellular Populations Using Arrays.

    PubMed

    Watanabe, Leandro; Myers, Chris J

    2016-08-19

    The Systems Biology Markup Language (SBML) has been widely used for modeling biological systems. Although SBML has been successful in representing a wide variety of biochemical models, the core standard lacks the structure for representing large complex regular systems in a standard way, such as whole-cell and cellular population models. These models require a large number of variables to represent certain aspects of these types of models, such as the chromosome in the whole-cell model and the many identical cell models in a cellular population. While SBML core is not designed to handle these types of models efficiently, the proposed SBML arrays package can represent such regular structures more easily. However, in order to take full advantage of the package, analysis needs to be aware of the arrays structure. When expanding the array constructs within a model, some of the advantages of using arrays are lost. This paper describes a more efficient way to simulate arrayed models. To illustrate the proposed method, this paper uses a population of repressilator and genetic toggle switch circuits as examples. Results show that there are memory benefits using this approach with a modest cost in runtime. PMID:26912276

  7. Arrayed lipid bilayer chambers allow single-molecule analysis of membrane transporter activity

    PubMed Central

    Watanabe, Rikiya; Soga, Naoki; Fujita, Daishi; Tabata, Kazuhito V.; Yamauchi, Lisa; Hyeon Kim, Soo; Asanuma, Daisuke; Kamiya, Mako; Urano, Yasuteru; Suga, Hiroaki; Noji, Hiroyuki

    2014-01-01

    Nano- to micron-size reaction chamber arrays (femtolitre chamber arrays) have facilitated the development of sensitive and quantitative biological assays, such as single-molecule enzymatic assays, digital PCR and digital ELISA. However, the versatility of femtolitre chamber arrays is limited to reactions that occur in aqueous solutions. Here we report an arrayed lipid bilayer chamber system (ALBiC) that contains sub-million femtolitre chambers, each sealed with a stable 4-μm-diameter lipid bilayer membrane. When reconstituted with a limiting amount of the membrane transporter proteins α-hemolysin or F0F1-ATP synthase, the chambers within the ALBiC exhibit stochastic and quantized transporting activities. This demonstrates that the single-molecule analysis of passive and active membrane transport is achievable with the ALBiC system. This new platform broadens the versatility of femtolitre chamber arrays and paves the way for novel applications aimed at furthering our mechanistic understanding of membrane proteins’ function. PMID:25058452

  8. Potential of minicomputer/array-processor system for nonlinear finite-element analysis

    NASA Technical Reports Server (NTRS)

    Strohkorb, G. A.; Noor, A. K.

    1983-01-01

    The potential of using a minicomputer/array-processor system for the efficient solution of large-scale, nonlinear, finite-element problems is studied. A Prime 750 is used as the host computer, and a software simulator residing on the Prime is employed to assess the performance of the Floating Point Systems AP-120B array processor. Major hardware characteristics of the system such as virtual memory and parallel and pipeline processing are reviewed, and the interplay between various hardware components is examined. Effective use of the minicomputer/array-processor system for nonlinear analysis requires the following: (1) proper selection of the computational procedure and the capability to vectorize the numerical algorithms; (2) reduction of input-output operations; and (3) overlapping host and array-processor operations. A detailed discussion is given of techniques to accomplish each of these tasks. Two benchmark problems with 1715 and 3230 degrees of freedom, respectively, are selected to measure the anticipated gain in speed obtained by using the proposed algorithms on the array processor.

  9. Numeric-modeling sensitivity analysis of the performance of wind turbine arrays

    SciTech Connect

    Lissaman, P.B.S.; Gyatt, G.W.; Zalay, A.D.

    1982-06-01

    An evaluation of the numerical model created by Lissaman for predicting the performance of wind turbine arrays has been made. Model predictions of the wake parameters have been compared with both full-scale and wind tunnel measurements. Only limited, full-scale data were available, while wind tunnel studies showed difficulties in representing real meteorological conditions. Nevertheless, several modifications and additions have been made to the model using both theoretical and empirical techniques and the new model shows good correlation with experiment. The larger wake growth rate and shorter near wake length predicted by the new model lead to reduced interference effects on downstream turbines and hence greater array efficiencies. The array model has also been re-examined and now incorporates the ability to show the effects of real meteorological conditions such as variations in wind speed and unsteady winds. The resulting computer code has been run to show the sensitivity of array performance to meteorological, machine, and array parameters. Ambient turbulence and windwise spacing are shown to dominate, while hub height ratio is seen to be relatively unimportant. Finally, a detailed analysis of the Goodnoe Hills wind farm in Washington has been made to show how power output can be expected to vary with ambient turbulence, wind speed, and wind direction.

  10. EDITORIAL: Colloidal suspensions Colloidal suspensions

    NASA Astrophysics Data System (ADS)

    Petukhov, Andrei; Kegel, Willem; van Duijneveldt, Jeroen

    2011-05-01

    Special issue in honour of Henk Lekkerkerker's 65th birthday Professor Henk N W Lekkerkerker is a world-leading authority in the field of experimental and theoretical soft condensed matter. On the occasion of his 65th birthday in the summer of 2011, this special issue celebrates his many contributions to science. Henk Lekkerkerker obtained his undergraduate degree in chemistry at the University of Utrecht (1968) and moved to Calgary where he received his PhD in 1971. He moved to Brussels as a NATO fellow at the Université Libre de Bruxelles and was appointed to an assistant professorship (1974), an associate professorship (1977) and a full professorship (1980) in physical chemistry at the Vrije Universiteit Brussel. In 1985 he returned to The Netherlands to take up a professorship at the Van 't Hoff Laboratory, where he has been ever since. He has received a series of awards during his career, including the Onsager Medal (1999) of the University of Trondheim, the Bakhuys Roozeboom Gold Medal (2003) of the Royal Dutch Academy of Arts and Sciences (KNAW), the ECIS-Rhodia European Colloid and Interface Prize (2003), and the Liquid Matter Prize of the European Physical Society (2008). He was elected a member of KNAW in 1996, was awarded an Academy Chair position in 2005, and has held several visiting lectureships. Henk's work focuses on phase transitions in soft condensed matter, and he has made seminal contributions to both the theoretical and experimental aspects of this field. Here we highlight three major themes running through his work, and a few selected publications. So-called depletion interactions may lead to phase separation in colloid-polymer mixtures, and Henk realised that the partitioning of polymer needs to be taken into account to describe the phase behaviour correctly [1]. Colloidal suspensions can be used as model fluids, with the time- and length-scales involved leading to novel opportunities, notably the direct observation of capillary waves at a