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Sample records for 1-d particle-in-cell simulation

  1. Optimizing physical parameters in 1-D particle-in-cell simulations with Python

    NASA Astrophysics Data System (ADS)

    Ragan-Kelley, Benjamin; Verboncoeur, John P.; Lin, Ming-Chieh

    2014-10-01

    A particle-in-cell (PIC) simulation tool, OOPD1, is wrapped in the Python programming language, enabling automated algorithmic optimization of physical and numerical parameters. The Python-based environment exposes internal variables, enabling modification of simulation parameters, as well as run-time generation of new diagnostics based on calculations with internal data. For problems requiring an iterative optimization approach, this enables a programmable interactive feedback loop style simulation model, where the input to one simulation is a programmable function of the output of the previous one. This approach is applied to field-emission of electrons in a diode, in order to explore space charge effects in bipolar flow. We find an analytical solution for maximizing the space-charge limited current through a diode with an upstream ion current, and confirm the result with simulations, demonstrating the efficacy of the feedback scheme. We also demonstrate and analyze a modeling approach for scaling the ion mass, which can shorten simulation time without changing the ultimate result. The methods presented can be generalized to handle other applications where it is desirable to evolve simulation parameters based on algorithmic results from the simulation, including models in which physical or numerical parameter tuning is used to converge or optimize a system in one or more variables.

  2. Colliding Two Shocks: 1-D full Particle-in-Cell Simulation

    NASA Astrophysics Data System (ADS)

    Nakanotani, Masaru; Hada, T.; Matsukiyo, Shuichi; Mazelle, Christian

    2016-07-01

    Shock-shock interactions occur on various places in space and the interaction can produce high energy particles. A coronal mass ejection driven shock can collide with the Earth's bow shock [Hietala et al., 2011]. This study reported that ions are accelerated by the first Fermi acceleration between the two shocks before the collision. An electron acceleration through an interplanetary shock-Earth's bow shock interaction was also reported [Terasawa et al., 1997]. Shock-shock interactions can occur in astrophysical phenomena as well as in the heliosphere. For example, a young supernova shock can collide with the wind termination shock of a massive star if they are close to each other [Bykov et al., 2013]. Although hybrid simulations (ions and electrons treated as super-particles and mass-less fluid, respectively) were carried out to understand the kinetic nature of a shock-shock interaction [Cargill et al., 1986], hybrid simulations cannot resolve electron dynamics and non-thermal electrons. We, therefore, use one-dimensional full particle-in-cell (PIC) simulations to investigate a shock-shock interaction in which two shocks collide head-on. In a case of quasi-perpendicular shocks, electrons are accelerated by the mirror reflection between the two shocks before the collision (Fermi acceleration). On the other hand, because ions cannot go back upstream, the electron acceleration mechanism does not occur for ions. In a case of quasi-parallel shocks, ions can go back upstream and are accelerated at the shocks. The accelerated ions have great effect on the shock structure.

  3. Speed-limited particle-in-cell (SLPIC) simulation

    NASA Astrophysics Data System (ADS)

    Werner, Gregory; Cary, John; Jenkins, Thomas

    2016-10-01

    Speed-limited particle-in-cell (SLPIC) simulation is a new method for particle-based plasma simulation that allows increased timesteps in cases where the timestep is determined (e.g., in standard PIC) not by the smallest timescale of interest, but rather by an even smaller physical timescale that affects numerical stability. For example, SLPIC need not resolve the plasma frequency if plasma oscillations do not play a significant role in the simulation; in contrast, standard PIC must usually resolve the plasma frequency to avoid instability. Unlike fluid approaches, SLPIC retains a fully-kinetic description of plasma particles and includes all the same physical phenomena as PIC; in fact, if SLPIC is run with a PIC-compatible timestep, it is identical to PIC. However, unlike PIC, SLPIC can run stably with larger timesteps. SLPIC has been shown to be effective for finding steady-state solutions for 1D collisionless sheath problems, greatly speeding up computation despite a large ion/electron mass ratio. SLPIC is a relatively small modification of standard PIC, with no complexities that might degrade parallel efficiency (compared to PIC), and is similarly compatible with PIC field solvers and boundary conditions.

  4. Multigrid Particle-in-cell Simulations of Plasma Microturbulence

    SciTech Connect

    J.L.V. Lewandowski

    2003-06-17

    A new scheme to accurately retain kinetic electron effects in particle-in-cell (PIC) simulations for the case of electrostatic drift waves is presented. The splitting scheme, which is based on exact separation between adiabatic and on adiabatic electron responses, is shown to yield more accurate linear growth rates than the standard df scheme. The linear and nonlinear elliptic problems that arise in the splitting scheme are solved using a multi-grid solver. The multi-grid particle-in-cell approach offers an attractive path, both from the physics and numerical points of view, to simulate kinetic electron dynamics in global toroidal plasmas.

  5. Concurrent Algorithm For Particle-In-Cell Simulations

    NASA Technical Reports Server (NTRS)

    Liewer, Paulett C.; Decyk, Viktor K.

    1990-01-01

    Separate decompositions used for particle-motion and field calculations. General Concurrent Particle-in-Cell (GCPIC) algorithm used to implement motions of individual plasma particles (ions and electrons) under influence of particle-in-cell (PIC) computer codes on concurrent processors. Simulates motions of individual plasma particles under influence of electromagnetic fields generated by particles themselves. Performed to study variety of nonlinear problems in plasma physics, including magnetic and inertial fusion, plasmas in outer space, propagation of electron and ion beams, free-electron lasers, and particle accelerators.

  6. Optimized Loading for Particle-in-cell Gyrokinetic Simulations

    SciTech Connect

    J.L.V. Lewandowski

    2004-05-13

    The problem of particle loading in particle-in-cell gyrokinetic simulations is addressed using a quadratic optimization algorithm. Optimized loading in configuration space dramatically reduces the short wavelength modes in the electrostatic potential that are partly responsible for the non-conservation of total energy; further, the long wavelength modes are resolved with good accuracy. As a result, the conservation of energy for the optimized loading is much better that the conservation of energy for the random loading. The method is valid for any geometry and can be coupled to optimization algorithms in velocity space.

  7. Accelerating particle-in-cell simulations using multilevel Monte Carlo

    NASA Astrophysics Data System (ADS)

    Ricketson, Lee

    2015-11-01

    Particle-in-cell (PIC) simulations have been an important tool in understanding plasmas since the dawn of the digital computer. Much more recently, the multilevel Monte Carlo (MLMC) method has accelerated particle-based simulations of a variety of systems described by stochastic differential equations (SDEs), from financial portfolios to porous media flow. The fundamental idea of MLMC is to perform correlated particle simulations using a hierarchy of different time steps, and to use these correlations for variance reduction on the fine-step result. This framework is directly applicable to the Langevin formulation of Coulomb collisions, as demonstrated in previous work, but in order to apply to PIC simulations of realistic scenarios, MLMC must be generalized to incorporate self-consistent evolution of the electromagnetic fields. We present such a generalization, with rigorous results concerning its accuracy and efficiency. We present examples of the method in the collisionless, electrostatic context, and discuss applications and extensions for the future.

  8. Particle-in-cell simulations of Hall plasma thrusters

    NASA Astrophysics Data System (ADS)

    Miranda, Rodrigo; Ferreira, Jose Leonardo; Martins, Alexandre

    2016-07-01

    Hall plasma thrusters can be modelled using particle-in-cell (PIC) simulations. In these simulations, the plasma is described by a set of equations which represent a coupled system of charged particles and electromagnetic fields. The fields are computed using a spatial grid (i.e., a discretization in space), whereas the particles can move continuously in space. Briefly, the particle and fields dynamics are computed as follows. First, forces due to electric and magnetic fields are employed to calculate the velocities and positions of particles. Next, the velocities and positions of particles are used to compute the charge and current densities at discrete positions in space. Finally, these densities are used to solve the electromagnetic field equations in the grid, which are interpolated at the position of the particles to obtain the acting forces, and restart this cycle. We will present numerical simulations using software for PIC simulations to study turbulence, wave and instabilities that arise in Hall plasma thrusters. We have sucessfully reproduced a numerical simulation of a SPT-100 Hall thruster using a two-dimensional (2D) model. In addition, we are developing a 2D model of a cylindrical Hall thruster. The results of these simulations will contribute to improve the performance of plasma thrusters to be used in Cubesats satellites currenty in development at the Plasma Laboratory at University of Brasília.

  9. Numerical thermalization in particle-in-cell simulations with Monte-Carlo collisions

    NASA Astrophysics Data System (ADS)

    Lai, P. Y.; Lin, T. Y.; Lin-Liu, Y. R.; Chen, S. H.

    2014-12-01

    Numerical thermalization in collisional one-dimensional (1D) electrostatic (ES) particle-in-cell (PIC) simulations was investigated. Two collision models, the pitch-angle scattering of electrons by the stationary ion background and large-angle collisions between the electrons and the neutral background, were included in the PIC simulation using Monte-Carlo methods. The numerical results show that the thermalization times in both models were considerably reduced by the additional Monte-Carlo collisions as demonstrated by comparisons with Turner's previous simulation results based on a head-on collision model [M. M. Turner, Phys. Plasmas 13, 033506 (2006)]. However, the breakdown of Dawson's scaling law in the collisional 1D ES PIC simulation is more complicated than that was observed by Turner, and the revised scaling law of the numerical thermalization time with numerical parameters are derived on the basis of the simulation results obtained in this study.

  10. Numerical thermalization in particle-in-cell simulations with Monte-Carlo collisions

    SciTech Connect

    Lai, P. Y.; Lin, T. Y.; Lin-Liu, Y. R.; Chen, S. H.

    2014-12-15

    Numerical thermalization in collisional one-dimensional (1D) electrostatic (ES) particle-in-cell (PIC) simulations was investigated. Two collision models, the pitch-angle scattering of electrons by the stationary ion background and large-angle collisions between the electrons and the neutral background, were included in the PIC simulation using Monte-Carlo methods. The numerical results show that the thermalization times in both models were considerably reduced by the additional Monte-Carlo collisions as demonstrated by comparisons with Turner's previous simulation results based on a head-on collision model [M. M. Turner, Phys. Plasmas 13, 033506 (2006)]. However, the breakdown of Dawson's scaling law in the collisional 1D ES PIC simulation is more complicated than that was observed by Turner, and the revised scaling law of the numerical thermalization time with numerical parameters are derived on the basis of the simulation results obtained in this study.

  11. Turbulence dissipation challenge: particle-in-cell simulations

    NASA Astrophysics Data System (ADS)

    Roytershteyn, V.; Karimabadi, H.; Omelchenko, Y.; Germaschewski, K.

    2015-12-01

    We discuss application of three particle in cell (PIC) codes to the problems relevant to turbulence dissipation challenge. VPIC is a fully kinetic code extensively used to study a variety of diverse problems ranging from laboratory plasmas to astrophysics. PSC is a flexible fully kinetic code offering a variety of algorithms that can be advantageous to turbulence simulations, including high order particle shapes, dynamic load balancing, and ability to efficiently run on Graphics Processing Units (GPUs). Finally, HYPERS is a novel hybrid (kinetic ions+fluid electrons) code, which utilizes asynchronous time advance and a number of other advanced algorithms. We present examples drawn both from large-scale turbulence simulations and from the test problems outlined by the turbulence dissipation challenge. Special attention is paid to such issues as the small-scale intermittency of inertial range turbulence, mode content of the sub-proton range of scales, the formation of electron-scale current sheets and the role of magnetic reconnection, as well as numerical challenges of applying PIC codes to simulations of astrophysical turbulence.

  12. Particle in cell simulation of a radiofrequency plasma jet expanding in vacuum

    SciTech Connect

    Charles, C. Hawkins, R.; Boswell, R. W.

    2015-03-02

    The effect of a pressure gradient (∼133 Pa–0.133 Pa) on electron and ion energy distributions in a radiofrequency (rf at 13.56 MHz) argon plasma jet is studied using a 1D-3v Particle In Cell (PIC) simulation. The PIC domain is three times that of the 0.018 m long plasma cavity and the total simulation time is 1 ms. Ion heating and acceleration up to a drift velocity about 2000 m s{sup −1} are measured along the jet's main expansion axis. Elastic and charge exchange ion-neutral collisions histograms computed at equilibrium during 0.74 ms show that charge exchange collisions act as the main neutral heating mechanism.

  13. Plasma electron hole kinematics. II. Hole tracking Particle-In-Cell simulation

    NASA Astrophysics Data System (ADS)

    Zhou, C.; Hutchinson, I. H.

    2016-08-01

    The kinematics of a 1-D electron hole is studied using a novel Particle-In-Cell simulation code. A hole tracking technique enables us to follow the trajectory of a fast-moving solitary hole and study quantitatively hole acceleration and coupling to ions. We observe a transient at the initial stage of hole formation when the hole accelerates to several times the cold-ion sound speed. Artificially imposing slow ion speed changes on a fully formed hole causes its velocity to change even when the ion stream speed in the hole frame greatly exceeds the ion thermal speed, so there are no reflected ions. The behavior that we observe in numerical simulations agrees very well with our analytic theory of hole momentum conservation and the effects of "jetting."

  14. Measuring Landau damping in Particle-in-Cell simulations using particles of different charge-weights

    NASA Astrophysics Data System (ADS)

    Ren, C.; Sarkar, A.; Cao, Y.-X.; Huang, M. C.; Li, J.

    2016-10-01

    We study whether putting more particles in ``region of interest (ROI)'' in phase space can efficiently increase Particle-in-Cell (PIC) simulation accuracy. We use Landau damping of a plasma wave as a figure of merit and set the ROI near the phase velocity of the wave. Improvement in Landau damping rate measurement is observed in 1D PIC simulations when employing more particles in the ROI but the effect is not monotonic. This is partly due to energy transfer from particles of large charge weights to those of smaller weights through the electric fields. Possible strategies to mitigate the energy transfer will also be discussed. This work is supported by the National Science Foundation under Grant No. PHY-1314734 and by the Department of Energy under Grant No. DE-SC0012316.

  15. Particle in cell simulation of a radiofrequency plasma jet expanding in vacuum

    NASA Astrophysics Data System (ADS)

    Charles, C.; Hawkins, R.; Boswell, R. W.

    2015-03-01

    The effect of a pressure gradient (˜133 Pa-0.133 Pa) on electron and ion energy distributions in a radiofrequency (rf at 13.56 MHz) argon plasma jet is studied using a 1D-3v Particle In Cell (PIC) simulation. The PIC domain is three times that of the 0.018 m long plasma cavity and the total simulation time is 1 ms. Ion heating and acceleration up to a drift velocity about 2000 m s-1 are measured along the jet's main expansion axis. Elastic and charge exchange ion-neutral collisions histograms computed at equilibrium during 0.74 ms show that charge exchange collisions act as the main neutral heating mechanism.

  16. Low-noise Collision Operators for Particle-in-cell Simulations

    SciTech Connect

    J.L.V. Lewandowski

    2005-03-08

    A new method to implement low-noise collision operators in particle-in-cell simulations is presented. The method is based on the fact that relevant collision operators can be included naturally in the Lagrangian formulation that exemplifies the particle-in-cell simulation method. Numerical simulations show that the momentum and energy conservation properties of the simulated plasma associated with the low-noise collision operator are improved as compared with standard collision algorithms based on random numbers.

  17. Parametric decay of a parallel propagating monochromatic whistler wave: Particle-in-cell simulations

    NASA Astrophysics Data System (ADS)

    Ke, Yangguang; Gao, Xinliang; Lu, Quanming; Wang, Shui

    2017-01-01

    In this paper, by using one-dimensional (1-D) particle-in-cell simulations, we investigate the parametric decay of a parallel propagating monochromatic whistler wave with various wave frequencies and amplitudes. The pump whistler wave can decay into a backscattered daughter whistler wave and an ion acoustic wave, and the decay instability grows more rapidly with the increase of the frequency or amplitude. When the frequency or amplitude is sufficiently large, a multiple decay process may occur, where the daughter whistler wave undergoes a secondary decay into an ion acoustic wave and a forward propagating whistler wave. We also find that during the parametric decay a considerable part of protons can be accelerated along the background magnetic field by the enhanced ion acoustic wave through the Landau resonance. The implication of the parametric decay to the evolution of whistler waves in Earth's magnetosphere is also discussed in the paper.

  18. Multi-dimensional, fully implicit, exactly conserving electromagnetic particle-in-cell simulations in curvilinear geometry

    NASA Astrophysics Data System (ADS)

    Chen, Guangye; Chacon, Luis

    2015-11-01

    We discuss a new, conservative, fully implicit 2D3V Vlasov-Darwin particle-in-cell algorithm in curvilinear geometry for non-radiative, electromagnetic kinetic plasma simulations. Unlike standard explicit PIC schemes, fully implicit PIC algorithms are unconditionally stable and allow exact discrete energy and charge conservation. Here, we extend these algorithms to curvilinear geometry. The algorithm retains its exact conservation properties in curvilinear grids. The nonlinear iteration is effectively accelerated with a fluid preconditioner for weakly to modestly magnetized plasmas, which allows efficient use of large timesteps, O (√{mi/me}c/veT) larger than the explicit CFL. In this presentation, we will introduce the main algorithmic components of the approach, and demonstrate the accuracy and efficiency properties of the algorithm with various numerical experiments in 1D (slow shock) and 2D (island coalescense).

  19. Fully implicit, energy-conserving electromagnetic particle-in-cell simulations in multiple dimensions

    NASA Astrophysics Data System (ADS)

    Chacon, Luis; Chen, Guangye

    2015-11-01

    We discuss a new, implicit 2D-3V particle-in-cell (PIC) algorithm for non-radiative, electromagnetic kinetic plasma simulations, based on the Vlasov-Darwin model. The Vlasov-Darwin model avoids radiative noise issues, but is elliptic and renders explicit time integration unconditionally unstable. Absolutely stable, fully implicit, charge and energy conserving PIC algorithms for both electrostatic and electromagnetic regimes have been recently developed in 1D. In this study, we build on these recent successes to develop a multi-D, fully implicit PIC algorithm for the Vlasov-Darwin model. The algorithm conserves global energy, local charge, and particle canonical-momentum exactly. The nonlinear iteration is effectively accelerated with a fluid preconditioner, allowing the efficient use of large timesteps compared to the explicit CFL. We demonstrate the potential of the approach with various numerical examples in 2D-3V.

  20. An energy- and charge-conserving, nonlinearly implicit, electromagnetic 1D-3V Vlasov-Darwin particle-in-cell algorithm

    NASA Astrophysics Data System (ADS)

    Chen, G.; Chacón, L.

    2014-10-01

    A recent proof-of-principle study proposes a nonlinear electrostatic implicit particle-in-cell (PIC) algorithm in one dimension (Chen et al., 2011). The algorithm employs a kinetically enslaved Jacobian-free Newton-Krylov (JFNK) method, and conserves energy and charge to numerical round-off. In this study, we generalize the method to electromagnetic simulations in 1D using the Darwin approximation to Maxwell's equations, which avoids radiative noise issues by ordering out the light wave. An implicit, orbit-averaged, time-space-centered finite difference scheme is employed in both the 1D Darwin field equations (in potential form) and the 1D-3V particle orbit equations to produce a discrete system that remains exactly charge- and energy-conserving. Furthermore, enabled by the implicit Darwin equations, exact conservation of the canonical momentum per particle in any ignorable direction is enforced via a suitable scattering rule for the magnetic field. We have developed a simple preconditioner that targets electrostatic waves and skin currents, and allows us to employ time steps O(√{mi /me } c /veT) larger than the explicit CFL. Several 1D numerical experiments demonstrate the accuracy, performance, and conservation properties of the algorithm. In particular, the scheme is shown to be second-order accurate, and CPU speedups of more than three orders of magnitude vs. an explicit Vlasov-Maxwell solver are demonstrated in the "cold" plasma regime (where kλD ≪ 1).

  1. Multidimensional, fully implicit, exactly conserving electromagnetic particle-in-cell simulations

    NASA Astrophysics Data System (ADS)

    Chacon, Luis

    2015-09-01

    We discuss a new, conservative, fully implicit 2D-3V particle-in-cell algorithm for non-radiative, electromagnetic kinetic plasma simulations, based on the Vlasov-Darwin model. Unlike earlier linearly implicit PIC schemes and standard explicit PIC schemes, fully implicit PIC algorithms are unconditionally stable and allow exact discrete energy and charge conservation. This has been demonstrated in 1D electrostatic and electromagnetic contexts. In this study, we build on these recent algorithms to develop an implicit, orbit-averaged, time-space-centered finite difference scheme for the Darwin field and particle orbit equations for multiple species in multiple dimensions. The Vlasov-Darwin model is very attractive for PIC simulations because it avoids radiative noise issues in non-radiative electromagnetic regimes. The algorithm conserves global energy, local charge, and particle canonical-momentum exactly, even with grid packing. The nonlinear iteration is effectively accelerated with a fluid preconditioner, which allows efficient use of large timesteps, O(√{mi/me}c/veT) larger than the explicit CFL. In this presentation, we will introduce the main algorithmic components of the approach, and demonstrate the accuracy and efficiency properties of the algorithm with various numerical experiments in 1D and 2D. Support from the LANL LDRD program and the DOE-SC ASCR office.

  2. Particle-in-Cell Simulations of Atmospheric Pressure He/2%H2O Discharges

    NASA Astrophysics Data System (ADS)

    Kawamura, E.; Lieberman, M. A.; Lichtenberg, A. J.; Graves, D. B.; Gopalakrishnan, R.

    2015-09-01

    Atmospheric pressure micro-discharges in contact with liquid surfaces are of increasing interest, especially in the bio-medical field. We conduct 1D3v particle-in-cell (PIC) simulations of a voltage-driven 1 mm width atmospheric pressure He/2% H2O plasma discharge in series with an 0.5 mm width liquid H2O layer and a 1mm width quartz dielectric layer. A previously developed two-temperature hybrid global model of atmospheric pressure He/H2O discharges was used to determine the most important species and collisional reactions to use in the PIC simulations. We found that H13O6+, H5O3-, and electrons were the most prominent charged species, while most of the metastable helium He* was quenched via Penning ionization. The ion-induced secondary emission coefficient γi was assumed to be 0.15 at all surfaces. A series of simulations were conducted at 27.12 MHz with Jrf ~ 800-2200 A/m2. The H2O rotational and vibrational excitation losses were so high that electrons reached the walls at thermal temperatures. We also simulated a much lower frequency case of 50 kHz with Vrf = 10 kV. In this case, the discharge ran in a pure time-varying γ-mode. This work was supported by the Department of Energy Office of Fusion Energy Science Contract DE-SC0001939.

  3. Particle-in-cell simulation of a Hall thruster

    NASA Astrophysics Data System (ADS)

    Liu, Hui; Wu, Boying; Yu, Daren; Cao, Yong; Duan, Ping

    2010-04-01

    Hall thrusters are widely used as space electric propulsion devices. Due to the complex plasma phenomenon and high computation cost, currently it is difficult to fully simulate the real physical process in Hall thrusters. Recently, Szabo and Taccogna have proposed two different methods to simplify and accelerate the simulation, respectively. In this paper, both these methods of acceleration are analysed and compared, and then a modified method of acceleration is proposed. In order to verify the modified method of acceleration, the influence of magnetic field gradient on plasma parameter distribution in the channel is simulated. The numerical results show that the magnetic field gradient can significantly alter the position of the ionization region and thruster performance.

  4. Particle-in-Cell simulation of energetic particles driven instabilities

    NASA Astrophysics Data System (ADS)

    Chen, Yang; Parker, Scott E.; Lang, Jianying; Fu, Guoyong

    2009-11-01

    We present simulations of the evolution of energetic particles driven modes with the gyrokinetic turbulence code GEMfootnotetextY. Chen and S. E. Parker, J. Comp. Phys. 220, 839 (2007), except that kinetic electrons are replaced by a mass-less fluid model. PIC simulations of energetic particles use either the conventional full-f method or the δ method. The latter is adequate for low-amplitude fluctuation amplitudes. The collisional δ -methodfootnotetextY. Chen and R. White, Phys. Plasmas 4, 3591 (1997) is used to systematically account for collisions and particle source and sink. Steady state saturation amplitudes are benchmarked with predictions of analytic theory. We also employ full-f simulationsfootnotetextY. Todo et. al, Phys. Plasmas 10, 2888 (2003) to study bursty events in which the instabilities reach large amplitudes and cause macroscopic redistribution or loss of the particles. With full-f it is easy to retain all the nonlinear effects and treat accurately discontinuities in the distribution function at phase-space boundaries. Whereas the energetic particle current is neglegible in the Ampere's law in δ simulations, it is important in full-f simulations. Thermal ion kinetic effects are observed to be important.

  5. Particle-in-cell Simulations of Stimulated Raman Scattering

    NASA Astrophysics Data System (ADS)

    Winjum, B. J.; Fahlen, J.; Tsung, F. S.; Mori, W. B.; Hinkel, D. E.; Langdon, A. B.

    2006-10-01

    Using the full-PIC code OSIRIS, we have studied stimulated Raman scattering (SRS) over a wide range of parameters relevant to NIF. The role of beat-wave damping as a saturation mechanism is explored, as well as its relationship to other nonlinear effects which have previously been used to explain SRS behavior in NIF-relevant plasmas. Vu et al., have proposed that a nonlinear frequency shift due to the trapped particles detunes the instability, Brunner and Valeo argue that the trapped-particle instability is one of the dominant saturation mechanisms, while L. Yin et al., claim that electron beam acoustic modes are important. We will discuss the role played by each of these effects in OSIRIS simulations, as well as the importance of plasma wave convection on the recurrence of SRS reflectivity. We will also discuss how SRS behavior changes as the electron density and temperature are varied.

  6. Implementations of mesh refinement schemes for particle-in-cell plasma simulations

    SciTech Connect

    Vay, J.-L.; Colella, P.; Friedman, A.; Grote, D.P.; McCorquodale, P.; Serafini, D.B.

    2003-10-20

    Plasma simulations are often rendered challenging by the disparity of scales in time and in space which must be resolved. When these disparities are in distinctive zones of the simulation region, a method which has proven to be effective in other areas (e.g. fluid dynamics simulations) is the mesh refinement technique. We briefly discuss the challenges posed by coupling this technique with plasma Particle-In-Cell simulations and present two implementations in more detail, with examples.

  7. Particle-in-cell simulation of large amplitude ion-acoustic solitons

    SciTech Connect

    Sharma, Sarveshwar Sengupta, Sudip; Sen, Abhijit

    2015-02-15

    The propagation of large amplitude ion-acoustic solitons is studied in the laboratory frame (x, t) using a 1-D particle-in-cell code that evolves the ion dynamics by treating them as particles but assumes the electrons to follow the usual Boltzmann distribution. It is observed that for very low Mach numbers the simulation results closely match the Korteweg-de Vries soliton solutions, obtained in the wave frame, and which propagate without distortion. The collision of two such profiles is observed to exhibit the usual solitonic behaviour. As the Mach number is increased, the given profile initially evolves and then settles down to the exact solution of the full non-linear Poisson equation, which then subsequently propagates without distortion. The fractional change in amplitude is found to increase linearly with Mach number. It is further observed that initial profiles satisfying k{sup 2}λ{sub de}{sup 2}<1 break up into a series of solitons.

  8. Global gyrokinetic particle-in-cell simulations of internal kink instabilities

    SciTech Connect

    Mishchenko, Alexey; Zocco, Alessandro

    2012-12-15

    Internal kink instabilities have been studied in straight tokamak geometry employing an electromagnetic gyrokinetic particle-in-cell (PIC) code. The ideal-MHD internal kink mode and the collisionless m=1 tearing mode have been successfully simulated with the PIC code. Diamagnetic effects on the internal kink modes have also been investigated.

  9. Lagrangian MHD Particle-in-Cell simulations of coronal interplanetary shocks driven by observations

    NASA Astrophysics Data System (ADS)

    Lapenta, Giovanni; Bacchini, Fabio; Bemporad, Alessandro; Susino, Roberto; Olshevskyi, Vyacheslav

    2016-04-01

    In this work, we compare the spatial distribution of the plasma parameters along the June 11, 1999 CME-driven shock front with the results obtained from a CME-like event simulated with the FLIPMHD3D code, based on the FLIP-MHD Particle-in-Cell (PiC) method. The observational data are retrieved from the combination of white-light (WL) coronagraphic data (for the upstream values) and the application of the Rankine-Hugoniot (RH) equations (for the downstream values). The comparison shows a higher compression ratio X and Alfvénic Mach number MA at the shock nose, and a stronger magnetic field deflection d towards the flanks, in agreement with observations. Then, we compare the spatial distribution of MA with the profiles obtained from the solutions of the shock adiabatic equation relating MA, X, and the angle between the upstream magnetic field and the shock front normal for the special cases of parallel and perpendicular shock, and with a semi-empirical expression for a generically oblique shock. The semi-empirical curve approximates the actual values of MA very well, if the effects of a non-negligible shock thickness and plasma-to magnetic pressure ratio are taken into account throughout the computation. Moreover, the simulated shock turns out to be supercritical at the nose and sub-critical at the flanks. Finally, we develop a new 1D Lagrangian ideal MHD method based on the GrAALE code, to simulate the ion-electron temperature decoupling due to the shock transit. Two models are used, a simple solar wind model and a variable-gamma model. Both produce results in agreement with observations, the second one being capable of introducing the physics responsible for the additional electron heating due to secondary effects (collisions, Alfvén waves, etc.). Work supported by the European Commission under the SWIFF project (swiff.eu)

  10. Particle-in-cell simulations of the relaxation of electron beams in inhomogeneous solar wind plasmas

    NASA Astrophysics Data System (ADS)

    Thurgood, Jonathan O.; Tsiklauri, David

    2016-12-01

    Previous theoretical considerations of electron beam relaxation in inhomogeneous plasmas have indicated that the effects of the irregular solar wind may account for the poor agreement of homogeneous modelling with the observations. Quasi-linear theory and Hamiltonian models based on Zakharov's equations have indicated that when the level of density fluctuations is above a given threshold, density irregularities act to de-resonate the beam-plasma interaction, restricting Langmuir wave growth on the expense of beam energy. This work presents the first fully kinetic particle-in-cell (PIC) simulations of beam relaxation under the influence of density irregularities. We aim to independently determine the influence of background inhomogeneity on the beam-plasma system, and to test theoretical predictions and alternative models using a fully kinetic treatment. We carry out one-dimensional (1-D) PIC simulations of a bump-on-tail unstable electron beam in the presence of increasing levels of background inhomogeneity using the fully electromagnetic, relativistic EPOCH PIC code. We find that in the case of homogeneous background plasma density, Langmuir wave packets are generated at the resonant condition and then quasi-linear relaxation leads to a dynamic increase of wavenumbers generated. No electron acceleration is seen - unlike in the inhomogeneous experiments, all of which produce high-energy electrons. For the inhomogeneous experiments we also observe the generation of backwards-propagating Langmuir waves, which is shown directly to be due to the refraction of the packets off the density gradients. In the case of higher-amplitude density fluctuations, similar features to the weaker cases are found, but also packets can also deviate from the expected dispersion curve in -space due to nonlinearity. Our fully kinetic PIC simulations broadly confirm the findings of quasi-linear theory and the Hamiltonian model based on Zakharov's equations. Strong density fluctuations

  11. Particle-in-cell simulations of plasma accelerators and electron-neutral collisions

    SciTech Connect

    Bruhwiler, David L.; Giacone, Rodolfo E.; Cary, John R.; Verboncoeur, John P.; Mardahl, Peter; Esarey, Eric; Leemans, W.P.; Shadwick, B.A.

    2001-10-01

    We present 2-D simulations of both beam-driven and laser-driven plasma wakefield accelerators, using the object-oriented particle-in-cell code XOOPIC, which is time explicit, fully electromagnetic, and capable of running on massively parallel supercomputers. Simulations of laser-driven wakefields with low ({approx}10{sup 16} W/cm{sup 2}) and high ({approx}10{sup 18} W/cm{sup 2}) peak intensity laser pulses are conducted in slab geometry, showing agreement with theory and fluid simulations. Simulations of the E-157 beam wakefield experiment at the Stanford Linear Accelerator Center, in which a 30 GeV electron beam passes through 1 m of preionized lithium plasma, are conducted in cylindrical geometry, obtaining good agreement with previous work. We briefly describe some of the more significant modifications of XOOPIC required by this work, and summarize the issues relevant to modeling relativistic electron-neutral collisions in a particle-in-cell code.

  12. Verification of particle-in-cell simulations against exact solutions of kinetic equations

    NASA Astrophysics Data System (ADS)

    Turner, Miles

    2015-09-01

    Demonstrating correctness of computer simulations (or verification) has become a matter of increasing concern in recent years. The strongest type of verification is a demonstration that the simulation converges to an exact solution of the mathematical model that is supposed to be solved. Of course, this is possible only if such an exact solution is available. In this paper, we are interested in kinetic simulation using the particle-in-cell method, and consequently a relevant exact solution must be a solution of a kinetic equation. While we know of no such solutions that exercise all the features of a typical particle-in-cell simulation, in this paper we show that the mathematical literature contains several such solutions that involve a large fraction of the functionality of such a code, and which collectively exercise essentially all of the code functionality. These solutions include the plane diode, the neutron criticality problem, and the calculation of ion energy distribution functions in oscillating fields. In each of theses cases, we can show the the particle-in-cell simulation converges to the exact solution in the expected way. These demonstrations are strong evidence of correct implementation. Work supported by Science Foundation Ireland under grant 08/SRC/I1411.

  13. Wavelet-based Poisson solver for use in particle-in-cell simulations.

    PubMed

    Terzić, Balsa; Pogorelov, Ilya V

    2005-06-01

    We report on a successful implementation of a wavelet-based Poisson solver for use in three-dimensional particle-in-cell simulations. Our method harnesses advantages afforded by the wavelet formulation, such as sparsity of operators and data sets, existence of effective preconditioners, and the ability simultaneously to remove numerical noise and additional compression of relevant data sets. We present and discuss preliminary results relating to the application of the new solver to test problems in accelerator physics and astrophysics.

  14. Rescaling of microwave breakdown theory for monatomic gases by particle-in-cell/Monte Carlo simulations

    SciTech Connect

    Wang, Huihui; Meng, Lin; Liu, Dagang; Liu, Laqun

    2013-12-15

    A particle-in-cell/Monte Carlo code is developed to rescale the microwave breakdown theory which is put forward by Vyskrebentsev and Raizer. The results of simulations show that there is a distinct error in this theory when the high energy tail of electron energy distribution function increases. A rescaling factor is proposed to modify this theory, and the change rule of the rescaling factor is presented.

  15. Nonequilibrium Gyrokinetic Fluctuation Theory and Sampling Noise in Gyrokinetic Particle-in-cell Simulations

    SciTech Connect

    John A. Krommes

    2007-10-09

    The present state of the theory of fluctuations in gyrokinetic GK plasmas and especially its application to sampling noise in GK particle-in-cell PIC simulations is reviewed. Topics addressed include the Δf method, the fluctuation-dissipation theorem for both classical and GK many-body plasmas, the Klimontovich formalism, sampling noise in PIC simulations, statistical closure for partial differential equations, the theoretical foundations of spectral balance in the presence of arbitrary noise sources, and the derivation of Kadomtsev-type equations from the general formalism.

  16. Enhanced stopping of macro-particles in particle-in-cell simulations

    SciTech Connect

    May, J.; Tonge, J.; Ellis, I.; Mori, W. B.; Fiuza, F.; Fonseca, R. A.; Silva, L. O.

    2014-05-15

    We derive an equation for energy transfer from relativistic charged particles to a cold background plasma appropriate for finite-size particles that are used in particle-in-cell simulation codes. Expressions for one-, two-, and three-dimensional particles are presented, with special attention given to the two-dimensional case. This energy transfer is due to the electric field of the wake set up in the background plasma by the relativistic particle. The enhanced stopping is dependent on the q{sup 2}/m, where q is the charge and m is the mass of the relativistic particle, and therefore simulation macro-particles with large charge but identical q/m will stop more rapidly. The stopping power also depends on the effective particle shape of the macro-particle. These conclusions are verified in particle-in-cell simulations. We present 2D simulations of test particles, relaxation of high-energy tails, and integrated fast ignition simulations showing that the enhanced drag on macro-particles may adversely affect the results of these simulations in a wide range of high-energy density plasma scenarios. We also describe a particle splitting algorithm which can potentially overcome this problem and show its effect in controlling the stopping of macro-particles.

  17. Sheath and presheath in ion-ion plasmas via particle-in-cell simulation

    SciTech Connect

    Meige, A.; Leray, G.; Raimbault, J.-L.; Chabert, P.

    2008-02-11

    A full particle-in-cell simulation is developed to investigate electron-free plasmas constituted of positive and negative ions under the influence of a dc bias voltage. It is shown that high-voltage sheaths following the classical Child-law sheaths form within a few microseconds (which corresponds to the ion transit time) after the dc voltage is applied. It is also shown that there exists the equivalent of a Bohm criterion where a presheath accelerates the ions collected at one of the electrodes up to the sound speed before they enter the sheath. From an applied perspective, this leads to smaller sheaths than one would expect.

  18. Global particle-in-cell simulations of plasma pressure effects on Alfvenic modes

    SciTech Connect

    Mishchenko, Alexey; Koenies, Axel; Hatzky, Roman

    2011-01-15

    Global linear gyrokinetic particle-in-cell simulations of electromagnetic modes in realistic tokamak geometry are reported. The effect of plasma pressure on Alfvenic modes is studied. It is shown that the fast-particle pressure can considerably affect the shear Alfven wave continuum structure and hence the toroidicity-induced gap in the continuum. It is also found that the energetic ions can substantially reduce the growth rate of the ballooning modes (and perhaps completely stabilize them in a certain parameter range). Ballooning modes are found to be the dominant instabilities if the bulk-plasma pressure gradient is large enough.

  19. Particle-in-cell simulations of ambipolar and nonambipolar diffusion in magnetized plasmas

    SciTech Connect

    Lafleur, T.; Boswell, R. W.

    2012-05-15

    Using a two-dimensional particle-in-cell simulation, we investigate cross-field diffusion in low-pressure magnetized plasmas both in the presence and absence of conducting axial boundaries. With no axial boundary, the cross-field diffusion is observed to be ambipolar, as expected. However, when axial boundaries are added, the diffusion becomes distinctly nonambipolar. Electrons are prevented from escaping to the transverse walls and are preferentially removed from the discharge along the magnetic field lines, thus allowing quasi-neutrality to be maintained via a short-circuit effect at the axial boundaries.

  20. AB INITIO PULSAR MAGNETOSPHERE: THREE-DIMENSIONAL PARTICLE-IN-CELL SIMULATIONS OF AXISYMMETRIC PULSARS

    SciTech Connect

    Philippov, Alexander A.; Spitkovsky, Anatoly

    2014-04-20

    We perform ''first-principles'' relativistic particle-in-cell simulations of aligned pulsar magnetosphere. We allow free escape of particles from the surface of a neutron star and continuously populate the magnetosphere with neutral pair plasma to imitate pair production. As pair plasma supply increases, we observe the transition from a charge-separated ''electrosphere'' solution with trapped plasma and no spin-down to a solution close to the ideal force-free magnetosphere with electromagnetically dominated pulsar wind. We calculate the magnetospheric structure, current distribution, and spin-down power of the neutron star. We also discuss particle acceleration in the equatorial current sheet.

  1. Particle-in-cell simulations of the runaway breakdown of nitrogen

    SciTech Connect

    Levko, D.; Krasik, Ya. E.

    2012-12-01

    The runaway breakdown initiated by a mono-energetic beam of runaway electrons propagating through a cathode-anode gap filled with nitrogen at atmospheric pressure is studied using the one-dimensional particle-in-cell numerical model. It is shown that the breakdown is strongly influenced by the amplitude of the beam, its duration, and the electric field in the vicinity of the cathode. In addition, the simulation results showed that, in spite of the formation of rather dense plasma inside the cathode-anode gap by runaway electrons, the electric field is not screened because of frequent electron-neutral collisions.

  2. Acceleration of a Particle-in-Cell Code for Space Plasma Simulations with OpenACC

    NASA Astrophysics Data System (ADS)

    Peng, Ivy Bo; Markidis, Stefano; Vaivads, Andris; Vencels, Juris; Deca, Jan; Lapenta, Giovanni; Hart, Alistair; Laure, Erwin

    2015-04-01

    We simulate space plasmas with the Particle-in-cell (PIC) method that uses computational particles to mimic electrons and protons in solar wind and in Earth magnetosphere. The magnetic and electric fields are computed by solving the Maxwell's equations on a computational grid. In each PIC simulation step, there are four major phases: interpolation of fields to particles, updating the location and velocity of each particle, interpolation of particles to grids and solving the Maxwell's equations on the grid. We use the iPIC3D code, which was implemented in C++, using both MPI and OpenMP, for our case study. By November 2014, heterogeneous systems using hardware accelerators such as Graphics Processing Unit (GPUs) and the Many Integrated Core (MIC) coprocessors for high performance computing continue growth in the top 500 most powerful supercomputers world wide. Scientific applications for numerical simulations need to adapt to using accelerators to achieve portability and scalability in the coming exascale systems. In our work, we conduct a case study of using OpenACC to offload the computation intensive parts: particle mover and interpolation of particles to grids, in a massively parallel Particle-in-Cell simulation code, iPIC3D, to multi-GPU systems. We use MPI for inter-node communication for halo exchange and communicating particles. We identify the most promising parts suitable for GPUs accelerator by profiling using CrayPAT. We implemented manual deep copy to address the challenges of porting C++ classes to GPU. We document the necessary changes in the exiting algorithms to adapt for GPU computation. We present the challenges and findings as well as our methodology for porting a Particle-in-Cell code to multi-GPU systems using OpenACC. In this work, we will present the challenges, findings and our methodology of porting a Particle-in-Cell code for space applications as follows: We profile the iPIC3D code by Cray Performance Analysis Tool (CrayPAT) and identify

  3. Particle-in-cell simulations on spontaneous thermal magnetic field fluctuations

    SciTech Connect

    Simões, F. J. R. Jr.; Pavan, J.; Gaelzer, R.; Ziebell, L. F.; Yoon, P. H.

    2013-10-15

    In this paper an electromagnetic particle code is used to investigate the spontaneous thermal emission. Specifically we perform particle-in-cell simulations employing a non-relativistic isotropic Maxwellian particle distribution to show that thermal fluctuations are related to the origin of spontaneous magnetic field fluctuation. These thermal fluctuations can become seed for further amplification mechanisms and thus be considered at the origin of the cosmological magnetic field, at microgauss levels. Our numerical results are in accordance with theoretical results presented in the literature.

  4. Fluid preconditioning for Newton–Krylov-based, fully implicit, electrostatic particle-in-cell simulations

    SciTech Connect

    Chen, G.; Chacón, L.; Leibs, C.A.; Knoll, D.A.; Taitano, W.

    2014-02-01

    A recent proof-of-principle study proposes an energy- and charge-conserving, nonlinearly implicit electrostatic particle-in-cell (PIC) algorithm in one dimension [9]. The algorithm in the reference employs an unpreconditioned Jacobian-free Newton–Krylov method, which ensures nonlinear convergence at every timestep (resolving the dynamical timescale of interest). Kinetic enslavement, which is one key component of the algorithm, not only enables fully implicit PIC as a practical approach, but also allows preconditioning the kinetic solver with a fluid approximation. This study proposes such a preconditioner, in which the linearized moment equations are closed with moments computed from particles. Effective acceleration of the linear GMRES solve is demonstrated, on both uniform and non-uniform meshes. The algorithm performance is largely insensitive to the electron–ion mass ratio. Numerical experiments are performed on a 1D multi-scale ion acoustic wave test problem.

  5. Particle-In-Cell simulations of high pressure plasmas using graphics processing units

    NASA Astrophysics Data System (ADS)

    Gebhardt, Markus; Atteln, Frank; Brinkmann, Ralf Peter; Mussenbrock, Thomas; Mertmann, Philipp; Awakowicz, Peter

    2009-10-01

    Particle-In-Cell (PIC) simulations are widely used to understand the fundamental phenomena in low-temperature plasmas. Particularly plasmas at very low gas pressures are studied using PIC methods. The inherent drawback of these methods is that they are very time consuming -- certain stability conditions has to be satisfied. This holds even more for the PIC simulation of high pressure plasmas due to the very high collision rates. The simulations take up to very much time to run on standard computers and require the help of computer clusters or super computers. Recent advances in the field of graphics processing units (GPUs) provides every personal computer with a highly parallel multi processor architecture for very little money. This architecture is freely programmable and can be used to implement a wide class of problems. In this paper we present the concepts of a fully parallel PIC simulation of high pressure plasmas using the benefits of GPU programming.

  6. Particle-in-Cell Simulations of Stimulated Brillouin Scattering in Two and Three Spatial Dimensions.

    NASA Astrophysics Data System (ADS)

    Giacone, R. E.; Vu, H. X.

    1996-11-01

    The results arising from numerical simulations of Stimulated Brillouin Scattering (SBS) in two and three spatial dimensions using HERCULES, a particle ion/adiabatic fluid-electron particle-in cell code(H. X. Vu, J. Comput. Phys.) 124, 417 (1996)., are presented. We compare the results of these simulations against the solutions of a linearized fluid model of SBS in homogeneous plasmas(C. J. McKinstrie, R. Betti, R. E. Giacone, T. Kolber and J. S. Li, Phys. Rev. E) 50, 2182 (1994).. Multidimensional effects on the angular dependance of SBS are studied. The results obtained from numerical simulations are in good agreement with the linear model. Comparisons of beam bending (H. A. Rose, Phys. Plasmas) 3, 1709 (1996). and cross laser beams effects in two and three dimensions will be also presented. Work performed under the auspices of the US Department of Energy.

  7. Model and particle-in-cell simulation of ion energy distribution in collisionless sheath

    SciTech Connect

    Zhou, Zhuwen; Kong, Bo; Luo, Yuee; Chen, Deliang; Wang, Yuansheng

    2015-06-15

    In this paper, we propose a self-consistent theoretical model, which is described by the ion energy distributions (IEDs) in collisionless sheaths, and the analytical results for different combined dc/radio frequency (rf) capacitive coupled plasma discharge cases, including sheath voltage errors analysis, are compared with the results of numerical simulations using a one-dimensional plane-parallel particle-in-cell (PIC) simulation. The IEDs in collisionless sheaths are performed on combination of dc/rf voltage sources electrodes discharge using argon as the process gas. The incident ions on the grounded electrode are separated, according to their different radio frequencies, and dc voltages on a separated electrode, the IEDs, and widths of energy in sheath and the plasma sheath thickness are discussed. The IEDs, the IED widths, and sheath voltages by the theoretical model are investigated and show good agreement with PIC simulations.

  8. Relativistic Particle-In-Cell Simulations of Particle Accleration in Relativistic Jets

    NASA Technical Reports Server (NTRS)

    Nishikawa, K.-I.; Hardee, P.; Mizuno, Y.; Medvedev, M.; Hartmann, D. H.; Fishman, J. F.

    2008-01-01

    Highly accelerated particles are observed in astrophysical systems containing relativistic jets and shocks, e.g., active galactic nuclei (AGNs), microquasars, and Gamma-Ray Bursts (GRBs). Particle-In-Cell (PIC) simulations of relativistic electron-ion and electron-positron jets injected into a stationary medium show that efficient acceleration occurs downstream in the jet. In collisionless relativistic shocks particle acceleration is due to plasma waves and their associated instabilities, e.g., the Buneman instability, other two-stream instabilities, and the Weibel (filamentation) instability. Simulations show that the Weibel instability is responsible for generating and amplifying highly non-uniform, small-scale magnetic fields. The instability depends on strength and direction of the magnetic field. Particles in relativistic jets may be accelerated in a complicated dynamics of relativistic jets with magnetic field. We present results of our recent PIC simulations.

  9. Solution of Poisson's equation in electrostatic Particle-In-Cell simulations

    NASA Astrophysics Data System (ADS)

    Kahnfeld, Daniel; Schneider, Ralf; Matyash, Konstantin; Lüskow, Karl; Bandelow, Gunnar; Kalentev, Oleksandr; Duras, Julia; Kemnitz, Stefan

    2016-10-01

    For spacecrafts the concept of ion thrusters presents a very efficient method of propulsion. Optimization of thrusters is imperative, but experimental access is difficult. Plasma simulations offer means to understand the plasma physics within an ion thruster and can aid the design of new thruster concepts. In order to achieve best simulation performances, code optimizations and parallelization strategies need to be investigated. In this work the role of different solution strategies for Poisson's equation in electrostatic Particle-in-Cell simulations of the HEMP-DM3a ion thruster was studied. The direct solution method of LU decomposition is compared to a stationary iterative method, the successive over-relaxation solver. Results and runtime of solvers were compared, and an outlook on further improvements and developments is presented. This work was supported by the German Space Agency DLR through Project 50RS1510..

  10. Particle in cell simulation of laser-accelerated proton beams for radiation therapy.

    PubMed

    Fourkal, E; Shahine, B; Ding, M; Li, J S; Tajima, T; Ma, C M

    2002-12-01

    In this article we present the results of particle in cell (PIC) simulations of laser plasma interaction for proton acceleration for radiation therapy treatments. We show that under optimal interaction conditions protons can be accelerated up to relativistic energies of 300 MeV by a petawatt laser field. The proton acceleration is due to the dragging Coulomb force arising from charge separation induced by the ponderomotive pressure (light pressure) of high-intensity laser. The proton energy and phase space distribution functions obtained from the PIC simulations are used in the calculations of dose distributions using the GEANT Monte Carlo simulation code. Because of the broad energy and angular spectra of the protons, a compact particle selection and beam collimation system will be needed to generate small beams of polyenergetic protons for intensity modulated proton therapy.

  11. Particle-in-Cell simulations of filamentary structures formation in DBD-tissue interaction

    NASA Astrophysics Data System (ADS)

    Likhanskii, Alexandre; Messmer, Peter

    2011-10-01

    Recent studies demonstrated high potential of the dielectric barrier discharge (DBD) plasmas for medical applications, such as sterilization or tissue regeneration. Despite intensive experimental studies have been conducted, the mechanism of plasma-tissue interaction still remains unclear. One of the open questions for the plasma-medical applications is the mechanism of filamentary structures formation in plasma and their interaction with tissues. Since formation of filaments is a purely kinetic effect, this issue needs to be addressed using kinetic, Particle-In-Cell simulation approach. We will present results of such numerical study. We performed 2D simulations of multiple streamers generation in atmospheric air using Tech-X's 2D/3D hybrid simulation tool VORPAL. We will demonstrate the resolution of the filamentary structure and will report the plasma properties. We will also address the plasma-induced effects on the tissue.

  12. Small-angle Coulomb collision model for particle-in-cell simulations

    SciTech Connect

    Lemons, Don S. Winske, Dan; Daughton, William; Albright, Brian

    2009-03-20

    We construct and investigate a set of stochastic differential equations that incorporate the physics of velocity-dependent small-angle Coulomb collisions among the plasma particles in a particle-in-cell simulation. Each particle is scattered stochastically from all the other particles in a simulation cell modeled as one or more Maxwellians. Total energy and momentum are conserved by linear transformation of the velocity increments. In two test simulations the proposed 'particle-moment' collision algorithm performs well with time steps as large as 10% of the relaxation time - far larger than a particle-pairing collision algorithm, in which pairs of particles are scattered from one another, requires to achieve the same accuracy.

  13. Self-consistent particle-in-cell simulations of fundamental and harmonic radio plasma emission mechanisms

    NASA Astrophysics Data System (ADS)

    Tsiklauri, D.; Thurgood, J. O.

    2015-12-01

    first co-author Jonathan O. Thurgood (QMUL) The simulation of three-wave interaction based plasma emission, an underlying mechanism for type III solar radio bursts, is a challenging task requiring fully-kinetic, multi-dimensional models. This paper aims to resolve a contradiction in past attempts, whereby some authors report that no such processes occur and others draw conflicting conclusions, by using 2D, fully kinetic, particle-in-cell simulations of relaxing electron beams. Here we present the results of particle-in-cell simulations which for different physical parameters permit or prohibit the plasma emission. We show that the possibility of plasma emission is contingent upon the frequency of the initial electrostatic waves generated by the bump-in-tail instability, and that these waves may be prohibited from participating in the necessary three-wave interactions due to the frequency beat requirements. We caution against simulating astrophysical radio bursts using unrealistically dense beams (a common approach which reduces run time), as the resulting non-Langmuir characteristics of the initial wave modes significantly suppresses the emission. Comparison of our results indicates that, contrary to the suggestions of previous authors, a plasma emission mechanism based on two counter-propagating beams is unnecessary in astrophysical context. Finally, we also consider the action of the Weibel instability, which generates an electromagnetic beam mode. As this provides a stronger contribution to electromagnetic energy than the emission, we stress that evidence of plasma emission in simulations must disentangle the two contributions and not simply interpret changes in total electromagnetic energy as the evidence of plasma emission. In summary, we present the first self-consistent demonstration of fundamental and harmonic plasma emission from a single-beam system via fully kinetic numerical simulation. Pre-print can be found at http://astro.qmul.ac.uk/~tsiklauri/jtdt1

  14. Load management strategy for Particle-In-Cell simulations in high energy particle acceleration

    NASA Astrophysics Data System (ADS)

    Beck, A.; Frederiksen, J. T.; Dérouillat, J.

    2016-09-01

    In the wake of the intense effort made for the experimental CILEX project, numerical simulation campaigns have been carried out in order to finalize the design of the facility and to identify optimal laser and plasma parameters. These simulations bring, of course, important insight into the fundamental physics at play. As a by-product, they also characterize the quality of our theoretical and numerical models. In this paper, we compare the results given by different codes and point out algorithmic limitations both in terms of physical accuracy and computational performances. These limitations are illustrated in the context of electron laser wakefield acceleration (LWFA). The main limitation we identify in state-of-the-art Particle-In-Cell (PIC) codes is computational load imbalance. We propose an innovative algorithm to deal with this specific issue as well as milestones towards a modern, accurate high-performance PIC code for high energy particle acceleration.

  15. Direct Numerical Simulation of Yukawa Systems by Particle-in-cell Methods

    NASA Astrophysics Data System (ADS)

    Müller, Wolf-Christian; Zeiler, Andreas; Morfill, Gregor E.

    2002-12-01

    Aiming at a fully self-consistent numerical model for the simulation of complex plasmas in rf-driven discharges, a highly efficient parallel particle-in-cell code has been developed, allowing for realizations of up to one billion interacting particles. As a first test case, we consider a Yukawa system which represents the simplest approximation of a complex plasma. The Yukawa approach where the dust particles are dressed with an isotropic Debye potential can be regarded as a low-order description of the dust-plasma interaction in the bulk a rf-driven complex plasma, away from the electrode sheaths. The simulation code is tested by examining a liquid-solid phase transition, i.e., the formation of a face-centered-cubic Yukawa crystal. This is done in a periodic-cube sub-volume, containing 13,824 dust particles, which corresponds to a total system size of ≈ 884,000 particles.

  16. Observation of transient electric fields in particle-in-cell simulation of capacitively coupled discharges

    SciTech Connect

    Sharma, S. Mishra, S. K.; Kaw, Predhiman K.

    2014-07-15

    The analytical prediction of the presence of transient electric field regions between the bulk plasma and sheath edge in radio frequency capacitively coupled plasma (RF-CCP) discharges has been reported by Kaganovich [Phys. Rev. Lett. 89, 265006 (2002)]. In this paper, we have used the semi-infinite particle-in-cell (PIC) simulation technique to verify the theoretical prediction for the existence of transient electric field in the linear regime; it is shown that the PIC simulation results are in good agreement with the results predicted by analytical model in this regime. It is also demonstrated that the linear theory overestimates the transient electric field as one moves from linear to weakly nonlinear regime. The effect of applied RF current density and electron temperature on evolution of transition field and phase mixing regime has been explored.

  17. Fast electron energy deposition in a magnetized plasma: Kinetic theory and particle-in-cell simulation

    SciTech Connect

    Robiche, J.; Rax, J.-M.; Bonnaud, G.; Gremillet, L.

    2010-03-15

    The collisional dynamics of a relativistic electron jet in a magnetized plasma are investigated within the framework of kinetic theory. The relativistic Fokker-Planck equation describing slowing down, pitch angle scattering, and cyclotron rotation is derived and solved. Based on the solution of this Fokker-Planck equation, an analytical formula for the root mean square spot size transverse to the magnetic field is derived and this result predicts a reduction in radial transport. Some comparisons with particle-in-cell simulation are made and confirm striking agreement between the theory and the simulation. For fast electron with 1 MeV typical kinetic energy interacting with a solid density hydrogen plasma, the energy deposition density in the transverse direction increases by a factor 2 for magnetic field of the order of 1 T. Along the magnetic field, the energy deposition profile is unaltered compared with the field-free case.

  18. Verification of particle-in-cell simulations with Monte Carlo collisions

    NASA Astrophysics Data System (ADS)

    Turner, M. M.

    2016-10-01

    Widespread recent interest in techniques for demonstrating that computer simulation programs are correct (‘verification’) has been motivated by evidence that traditional development and testing procedures are disturbingly ineffective. Reproducing an exact solution of the relevant model equations is generally accepted as the strongest available verification procedure, but this technique depends on the availability of suitable exact solutions. In this paper we consider verification of a particle-in-cell simulation with Monte Carlo collisions. We know of no exact solutions that simultaneously exercise all of the functions of this code. However, we show here that there can be found in the literature a number of non-trivial exact solutions, each of which exercises a substantial subset of these functions, and which in combination exercise all of the functions of the code. That the code is able to reproduce these solutions is correctness evidence of a stronger kind than has hitherto been elucidated.

  19. Particle-in-cell simulations of ion-acoustic waves with application to Saturn's magnetosphere

    SciTech Connect

    Koen, Etienne J.; Collier, Andrew B.; Hellberg, Manfred A.; Maharaj, Shimul K.

    2014-07-15

    Using a particle-in-cell simulation, the dispersion and growth rate of the ion-acoustic mode are investigated for a plasma containing two ion and two electron components. The electron velocities are modelled by a combination of two kappa distributions, as found in Saturn's magnetosphere. The ion components consist of adiabatic ions and an ultra-low density ion beam to drive a very weak instability, thereby ensuring observable waves. The ion-acoustic mode is explored for a range of parameter values such as κ, temperature ratio, and density ratio of the two electron components. The phase speed, frequency range, and growth rate of the mode are investigated. Simulations of double-kappa two-temperature plasmas typical of the three regions of Saturn's magnetosphere are also presented and analysed.

  20. Particle-in-cell simulations for virtual cathode oscillator including foil ablation effects

    SciTech Connect

    Singh, Gursharn; Chaturvedi, S.

    2011-06-15

    We have performed two- and three-dimensional, relativistic, electromagnetic, particle-in-cell simulations of an axially extracted virtual cathode oscillator (vircator). The simulations include, for the first time, self-consistent dynamics of the anode foil under the influence of the intense electron beam. This yields the variation of microwave output power as a function of time, including the role of anode ablation and anode-cathode gap closure. These simulations have been done using locally developed particle-in-cell (PIC) codes. The codes have been validated using two vircator designs available from the literature. The simulations reported in the present paper take account of foil ablation due to the intense electron flux, the resulting plasma expansion and shorting of the anode-cathode gap. The variation in anode transparency due to plasma formation is automatically taken into account. We find that damage is generally higher near the axis. Also, at all radial positions, there is little damage in the early stages, followed by a period of rapid erosion, followed in turn by low damage rates. A physical explanation has been given for these trends. As a result of gap closure due to plasma formation from the foil, the output microwave power initially increases, reaches a near-flat-top and then decreases steadily, reaching a minimum around 230 ns. This is consistent with a typical plasma expansion velocity of {approx}2 cm/{mu}s reported in the literature. We also find a significant variation in the dominant output frequency, from 6.3 to 7.6 GHz. This variation is small as long as the plasma density is small, up to {approx}40 ns. As the AK gap starts filling with plasma, there is a steady increase in this frequency.

  1. Particle-in-cell simulations of electron energization in laser-driven magnetic reconnection

    DOE PAGES

    Lu, San; Lu, Quanming; Guo, Fan; ...

    2016-01-25

    Electrons can be energized during laser-driven magnetic reconnection, and the energized electrons form three super-Alfvénic electron jets in the outflow region (Lu et al 2014 New J. Phys. 16 083021). In this paper, by performing two-dimensional particle-in-cell simulations, we find that the electrons can also be significantly energized before magnetic reconnection occurs. When two plasma bubbles with toroidal magnetic fields expand and squeeze each other, the electrons in the magnetic ribbons are energized through betatron acceleration due to the enhancement of the magnetic field, and an electron temperature anisotropymore » $${T}_{{\\rm{e}}\\perp }\\gt {T}_{{\\rm{e}}| | }$$ develops. Meanwhile, some electrons are trapped and bounced repeatedly between the two expanding/approaching bubbles and get energized through a Fermi-like process. Furthermore, the energization before magnetic reconnection is more significant (or important) than that during magnetic reconnection.« less

  2. Wavelet-based Poisson Solver for use in Particle-In-CellSimulations

    SciTech Connect

    Terzic, B.; Mihalcea, D.; Bohn, C.L.; Pogorelov, I.V.

    2005-05-13

    We report on a successful implementation of a wavelet based Poisson solver for use in 3D particle-in-cell (PIC) simulations. One new aspect of our algorithm is its ability to treat the general(inhomogeneous) Dirichlet boundary conditions (BCs). The solver harnesses advantages afforded by the wavelet formulation, such as sparsity of operators and data sets, existence of effective preconditioners, and the ability simultaneously to remove numerical noise and further compress relevant data sets. Having tested our method as a stand-alone solver on two model problems, we merged it into IMPACT-T to obtain a fully functional serial PIC code. We present and discuss preliminary results of application of the new code to the modeling of the Fermilab/NICADD and AES/JLab photoinjectors.

  3. Suprathermal particle energization in dipolarization fronts: Particle-in-cell simulations

    NASA Astrophysics Data System (ADS)

    Lu, San; Angelopoulos, V.; Fu, Huishan

    2016-10-01

    Within dipolarization fronts (DFs) in the Earth's magnetotail, significant magnetic energy is converted to plasma energy, and a significant portion of the electrons and ions therein are accelerated to suprathermal energies. The mechanism that produces these suprathermal particles while simultaneously reducing magnetic field energy is poorly understood, however. We use two-dimensional particle-in-cell simulations to explore this process in conventional flux bundle-type DFs, which are formed by single X line reconnection and connected to the Earth, and in newly proposed flux rope-type DFs, which are formed and bracketed by two X lines. In flux bundle-type DFs, electrons are betatron accelerated near the Bz peak, and ions are energized through reflection at the front. In flux rope-type DFs, most suprathermal electrons and ions are confined to the flux rope's magnetic structure and are accelerated through repeated reflections at the structure's two ends.

  4. New Particle-in-Cell Code for Numerical Simulation of Coherent Synchrotron Radiation

    SciTech Connect

    Balsa Terzic, Rui Li

    2010-05-01

    We present a first look at the new code for self-consistent, 2D simulations of beam dynamics affected by the coherent synchrotron radiation. The code is of the particle-in-cell variety: the beam bunch is sampled by point-charge particles, which are deposited on the grid; the corresponding forces on the grid are then computed using retarded potentials according to causality, and interpolated so as to advance the particles in time. The retarded potentials are evaluated by integrating over the 2D path history of the bunch, with the charge and current density at the retarded time obtained from interpolation of the particle distributions recorded at discrete timesteps. The code is benchmarked against analytical results obtained for a rigid-line bunch. We also outline the features and applications which are currently being developed.

  5. Parallel 3D Finite Element Particle-in-Cell Simulations with Pic3P

    SciTech Connect

    Candel, A.; Kabel, A.; Lee, L.; Li, Z.; Ng, C.; Schussman, G.; Ko, K.; Ben-Zvi, I.; Kewisch, J.; /Brookhaven

    2009-06-19

    SLAC's Advanced Computations Department (ACD) has developed the parallel 3D Finite Element electromagnetic Particle-In-Cell code Pic3P. Designed for simulations of beam-cavity interactions dominated by space charge effects, Pic3P solves the complete set of Maxwell-Lorentz equations self-consistently and includes space-charge, retardation and boundary effects from first principles. Higher-order Finite Element methods with adaptive refinement on conformal unstructured meshes lead to highly efficient use of computational resources. Massively parallel processing with dynamic load balancing enables large-scale modeling of photoinjectors with unprecedented accuracy, aiding the design and operation of next-generation accelerator facilities. Applications include the LCLS RF gun and the BNL polarized SRF gun.

  6. Particle-in-cell simulation of a double stage Hall thruster

    NASA Astrophysics Data System (ADS)

    Yu, Daren; Song, Maojiang; Liu, H.; Ding, Y. J.; Li, Hong

    2012-03-01

    The purpose of inventing a double stage Hall thruster is to control the propellant ionization and ion acceleration independently. In order to better understand the physics involved in such a thruster, an improved particle-in-cell method is used in this paper to simulate the discharge process. It is shown that the numerical features in the ionization stage accord well with the experimental results. It is also indicated that the ionization process and the acceleration process cannot be separated completely, as a relatively important ionization still occurs in the acceleration stage. Furthermore, an optimal threshold of ionization voltage in the ionization stage is existed to obtain the most favorable distributions of plasma parameters in the whole discharge channel.

  7. Half-Cell RF Gun Simulations with the Electromagnetic Particle-in-Cell Code VORPAL

    SciTech Connect

    Paul, K.; Dimitrov, D. A.; Busby, R.; Bruhwiler, D. L.; Smithe, D.; Cary, J. R.; Kewisch, J.; Kayran, D.; Calaga, R.; Ben-Zvi, I.

    2009-01-22

    We have simulated Brookhaven National Laboratory's half-cell superconducting RF gun design for a proposed high-current ERL using the three-dimensional, electromagnetic particle-in-cell code VORPAL. VORPAL computes the fully self-consistent electromagnetic fields produced by the electron bunches, meaning that it accurately models space-charge effects as well as bunch-to-bunch beam loading effects and the effects of higher-order cavity modes, though these are beyond the scope of this paper. We compare results from VORPAL to the well-established space-charge code PARMELA, using RF fields produced by SUPERFISH, as a benchmarking exercise in which the two codes should agree well.

  8. Particle-in-cell simulations of electron energization in laser-driven magnetic reconnection

    SciTech Connect

    Lu, San; Lu, Quanming; Guo, Fan; Sheng, Zhengming; Wang, Huanyu; Wang, Shui

    2016-01-25

    Electrons can be energized during laser-driven magnetic reconnection, and the energized electrons form three super-Alfvénic electron jets in the outflow region (Lu et al 2014 New J. Phys. 16 083021). In this paper, by performing two-dimensional particle-in-cell simulations, we find that the electrons can also be significantly energized before magnetic reconnection occurs. When two plasma bubbles with toroidal magnetic fields expand and squeeze each other, the electrons in the magnetic ribbons are energized through betatron acceleration due to the enhancement of the magnetic field, and an electron temperature anisotropy ${T}_{{\\rm{e}}\\perp }\\gt {T}_{{\\rm{e}}| | }$ develops. Meanwhile, some electrons are trapped and bounced repeatedly between the two expanding/approaching bubbles and get energized through a Fermi-like process. Furthermore, the energization before magnetic reconnection is more significant (or important) than that during magnetic reconnection.

  9. Whistler turbulence forward vs. inverse cascade. Three-dimensional particle-in-cell simulations

    DOE PAGES

    Chang, Ouliang; Gary, S. Peter; Wang, Joseph

    2015-02-12

    In this study, we present the results of the first fully three-dimensional particle-in-cell simulations of decaying whistler turbulence in a magnetized, homogeneous, collisionless plasma in which both forward cascades to shorter wavelengths, and inverse cascades to longer wavelengths are allowed to proceed. For the electron beta βe = 0.10 initial value considered here, the early-time rate of inverse cascade is very much smaller than the rate of forward cascade, so that at late times the fluctuation energy in the regime of the inverse cascade is much weaker than that in the forward cascade regime. Similarly, the wavevector anisotropy in themore » inverse cascade regime is much weaker than that in the forward cascade regime.« less

  10. Particle-in-cell simulations of laser beat-wave magnetization of dense plasmas

    SciTech Connect

    Welch, D. R.; Genoni, T. C.; Thoma, C.; Rose, D. V.; Hsu, S. C.

    2014-03-15

    The interaction of two lasers with a difference frequency near that of the ambient plasma frequency produces beat waves that can resonantly accelerate thermal electrons. These beat waves can be used to drive electron current and thereby embed magnetic fields into the plasma [Welch et al., Phys. Rev. Lett. 109, 225002 (2012)]. In this paper, we present two-dimensional particle-in-cell simulations of the beat-wave current-drive process over a wide range of angles between the injected lasers, laser intensities, and plasma densities. We discuss the application of this technique to the magnetization of dense plasmas, motivated in particular by the problem of forming high-β plasma targets in a standoff manner for magneto-inertial fusion. The feasibility of a near-term experiment embedding magnetic fields using lasers with micron-scale wavelengths into a ∼10{sup 18} cm{sup −3}-density plasma is assessed.

  11. Whistler turbulence forward vs. inverse cascade. Three-dimensional particle-in-cell simulations

    SciTech Connect

    Chang, Ouliang; Gary, S. Peter; Wang, Joseph

    2015-02-12

    In this study, we present the results of the first fully three-dimensional particle-in-cell simulations of decaying whistler turbulence in a magnetized, homogeneous, collisionless plasma in which both forward cascades to shorter wavelengths, and inverse cascades to longer wavelengths are allowed to proceed. For the electron beta βe = 0.10 initial value considered here, the early-time rate of inverse cascade is very much smaller than the rate of forward cascade, so that at late times the fluctuation energy in the regime of the inverse cascade is much weaker than that in the forward cascade regime. Similarly, the wavevector anisotropy in the inverse cascade regime is much weaker than that in the forward cascade regime.

  12. Taking larger timesteps with speed-limited particle-in-cell simulation

    NASA Astrophysics Data System (ADS)

    Werner, Gregory; Cary, John

    2015-11-01

    Particle-in-cell (PIC) simulation is often impractical because it includes too much unnecessary physics. For example, to avoid instability in many simulations the timestep must be small enough to resolve the plasma frequency, even if plasma oscillations do not play a significant role. Other methods (e.g., MHD/fluid and hybrid approaches) allow faster simulation, but often don't include enough physics. A new method, speed-limited PIC (SLPIC) simulation, offers kinetic simulation with an arbitrary-strength approximation tied to the timestep. With a small (standard PIC) timestep, SLPIC is identical to PIC, while a larger timestep (e.g., large compared to the inverse plasma frequency) results in the relaxation of fast particles over slower timescales. SLPIC is therefore useful in situations where the particle distribution functions change slowly compared to the timestep required by PIC. For example, SLPIC can simulate collisionless sheaths with a timestep hundreds of times larger than the inverse plasma frequency. SLPIC involves relatively isolated changes of a standard PIC code and poses no extra difficulties for parallelism; complexities of PIC, such as field solvers, collisions, and boundary conditions, carry over naturally to SLPIC with little change. This work is supported by NASA.

  13. Particle-in-cell simulations of electron acceleration by a simple capacitative antenna in collisionless plasma

    NASA Astrophysics Data System (ADS)

    Dieckmann, M. E.; Rowlands, G.; Eliasson, B.; Shukla, P. K.

    2004-12-01

    We examine the electron acceleration by a localized electrostatic potential oscillating at high frequencies by means of particle-in-cell (PIC) simulations, in which we apply oscillating electric fields to two neighboring simulation cells. We derive an analytic model for the direct electron heating by the externally driven antenna electric field, and we confirm that it approximates well the electron heating obtained in the simulations. In the simulations, transient waves accelerate electrons in a sheath surrounding the antenna. This increases the Larmor radii of the electrons close to the antenna, and more electrons can reach the antenna location to interact with the externally driven fields. The resulting hot electron sheath is dense enough to support strong waves that produce high-energy sounder-accelerated electrons (SAEs) by their nonlinear interaction with the ambient electrons. By increasing the emission amplitudes in our simulations to values that are representative for the ones of the sounder on board the OEDIPUS C (OC) satellites, we obtain electron acceleration into the energy range which is comparable to the 20 keV energies of the SAE observed by the OC mission. The emission also triggers stable electrostatic waves oscillating at frequencies close to the first harmonic of the electron cyclotron frequency. We find this to be an encouraging first step of examining SAE generation with kinetic numerical simulation codes.

  14. Fully implicit Particle-in-cell algorithms for multiscale plasma simulation

    SciTech Connect

    Chacon, Luis

    2015-07-16

    The outline of the paper is as follows: Particle-in-cell (PIC) methods for fully ionized collisionless plasmas, explicit vs. implicit PIC, 1D ES implicit PIC (charge and energy conservation, moment-based acceleration), and generalization to Multi-D EM PIC: Vlasov-Darwin model (review and motivation for Darwin model, conservation properties (energy, charge, and canonical momenta), and numerical benchmarks). The author demonstrates a fully implicit, fully nonlinear, multidimensional PIC formulation that features exact local charge conservation (via a novel particle mover strategy), exact global energy conservation (no particle self-heating or self-cooling), adaptive particle orbit integrator to control errors in momentum conservation, and canonical momenta (EM-PIC only, reduced dimensionality). The approach is free of numerical instabilities: ωpeΔt >> 1, and Δx >> λD. It requires many fewer dofs (vs. explicit PIC) for comparable accuracy in challenging problems. Significant CPU gains (vs explicit PIC) have been demonstrated. The method has much potential for efficiency gains vs. explicit in long-time-scale applications. Moment-based acceleration is effective in minimizing NFE, leading to an optimal algorithm.

  15. Electron and ion heating by whistler turbulence: Three-dimensional particle-in-cell simulations

    SciTech Connect

    Hughes, R. Scott; Gary, S. Peter; Wang, Joseph

    2014-12-17

    Three-dimensional particle-in-cell simulations of decaying whistler turbulence are carried out on a collisionless, homogeneous, magnetized, electron-ion plasma model. In addition, the simulations use an initial ensemble of relatively long wavelength whistler modes with a broad range of initial propagation directions with an initial electron beta βe = 0.05. The computations follow the temporal evolution of the fluctuations as they cascade into broadband turbulent spectra at shorter wavelengths. Three simulations correspond to successively larger simulation boxes and successively longer wavelengths of the initial fluctuations. The computations confirm previous results showing electron heating is preferentially parallel to the background magnetic field Bo, and ion heating is preferentially perpendicular to Bo. The new results here are that larger simulation boxes and longer initial whistler wavelengths yield weaker overall dissipation, consistent with linear dispersion theory predictions of decreased damping, stronger ion heating, consistent with a stronger ion Landau resonance, and weaker electron heating.

  16. Electron and ion heating by whistler turbulence: Three-dimensional particle-in-cell simulations

    DOE PAGES

    Hughes, R. Scott; Gary, S. Peter; Wang, Joseph

    2014-12-17

    Three-dimensional particle-in-cell simulations of decaying whistler turbulence are carried out on a collisionless, homogeneous, magnetized, electron-ion plasma model. In addition, the simulations use an initial ensemble of relatively long wavelength whistler modes with a broad range of initial propagation directions with an initial electron beta βe = 0.05. The computations follow the temporal evolution of the fluctuations as they cascade into broadband turbulent spectra at shorter wavelengths. Three simulations correspond to successively larger simulation boxes and successively longer wavelengths of the initial fluctuations. The computations confirm previous results showing electron heating is preferentially parallel to the background magnetic field Bo,more » and ion heating is preferentially perpendicular to Bo. The new results here are that larger simulation boxes and longer initial whistler wavelengths yield weaker overall dissipation, consistent with linear dispersion theory predictions of decreased damping, stronger ion heating, consistent with a stronger ion Landau resonance, and weaker electron heating.« less

  17. Accuracy of momentum and gyrodensity transport in global gyrokinetic particle-in-cell simulations

    SciTech Connect

    McMillan, B. F.; Villard, L.

    2014-05-15

    Gyrokinetic Particle-In-Cell (PIC) simulations based on conservative Lagrangian formalisms admit transport equations for conserved quantities such as gyrodensity and toroidal momentum, and these can be derived for arbitrary wavelength, even though previous applications have used the long-wavelength approximation. In control-variate PIC simulations, a consequence of the different treatment of the background (f{sub 0}) and perturbed parts (δf), when a splitting f = f{sub 0} + δf is performed, is that analytical transport relations for the relevant fluxes and moments are only reproduced in the large marker number limit. The transport equations for f can be used to write the inconsistency in the perturbed quantities explicitly in terms of the sampling of the background distribution f{sub 0}. This immediately allows estimates of the error in consistency of momentum transport in control-variate PIC simulations. This inconsistency tends to accumulate secularly and is not directly affected by the sources and noise control in the system. Although physical tokamaks often rotate quite strongly, the standard gyrokinetic formalism assumes weak perpendicular flows, comparable to the drift speed. For systems with such weak flows, maintaining acceptably small relative errors requires that a number of markers scale with the fourth power of the linear system size to consistently resolve long-wavelength evolution. To avoid this unfavourable scaling, an algorithm for exact gyrodensity transport has been developed, and this is shown to allow accurate simulations with an order of magnitude fewer markers.

  18. Particle-in-cell simulations of particle energization from low Mach number fast mode shocks

    NASA Astrophysics Data System (ADS)

    Park, Jaehong; Workman, Jared C.; Blackman, Eric G.; Ren, Chuang; Siller, Robert

    2012-06-01

    Astrophysical shocks are often studied in the high Mach number limit but weakly compressive fast shocks can occur in magnetic reconnection outflows and are considered to be a site of particle energization in solar flares. Here we study the microphysics of such perpendicular, low Mach number collisionless shocks using two-dimensional particle-in-cell simulations with a reduced ion/electron mass ratio and employ a moving wall boundary method for initial generation of the shock. This moving wall method allows for more control of the shock speed, smaller simulation box sizes, and longer simulation times than the commonly used fixed wall, reflection method of shock formation. Our results, which are independent of the shock formation method, reveal the prevalence shock drift acceleration (SDA) of both electron and ions in a purely perpendicular shock with Alfvén Mach number MA=6.8 and ratio of thermal to magnetic pressure β=8. We determine the respective minimum energies required for electrons and ions to incur SDA. We derive a theoretical electron distribution via SDA that compares to the simulation results. We also show that a modified two-stream instability due to the incoming and reflecting ions in the shock transition region acts as the mechanism to generate collisionless plasma turbulence that sustains the shock.

  19. Electron and Ion Heating By Whistler Turbulence: Three-Dimensional Particle-in-Cell Simulations

    NASA Astrophysics Data System (ADS)

    Hughes, R. S.; Gary, S. P.; Wang, J.

    2014-12-01

    Three-dimensional particle-in-cell (PIC) simulations of whistler turbulence in a magnetized, homogeneous, collisionless plasma have been carried out to study the consequent heating of both electrons and ions. An initial relatively isotropic spectrum of long-wavelength whistler mode fluctuations is imposed upon the system. The simulations follow the temporal evolution of the field fluctuations as they decay via a forward cascade into a broadband, turbulent spectrum at shorter wavelengths with an anisotropy in the sense of stronger fluctuation energy at k||, where the subscripts denote directions relative to the background magnetic field. As in previous whistler turbulence PIC simulations, electrons are heated with T||e >> Tperp,e. Consistent with the results of Saito and Nariyuki (2014) the ions are also heated, although more weakly than the electrons and with Tperp,i >> T||i. Larger simulation box sizes enable longer wavelength turbulence and lead to comparatively greater ion heating. Ion heating as a function of βe and initial fluctuation amplitudes is also studied. Saito, S., and Y. Nariyuki (2014), Perpendicular Ion Acceleration in Whistler Turbulence, Phys. Plasmas, 21, 042303.

  20. Particle-in-cell simulations of electron beam control using an inductive current divider

    SciTech Connect

    Swanekamp, S. B.; Angus, J. R.; Cooperstein, G.; Ottinger, P. F.; Richardson, A. S.; Schumer, J. W.; Weber, B. V.

    2015-11-18

    Kinetic, time-dependent, electromagnetic, particle-in-cell simulations of the inductive current divider are presented. The inductive current divider is a passive method for controlling the trajectory of an intense, hollow electron beam using a vacuum structure that inductively splits the beam’s return current. The current divider concept was proposed and studied theoretically in a previous publication [Phys. Plasmas 22, 023107 (2015)] A central post carries a portion of the return current (I1) while the outer conductor carries the remainder (I2) with the injected beam current given by Ib=I1+I2. The simulations are in agreement with the theory which predicts that the total force on the beam trajectory is proportional to (I2-I1) and the force on the beam envelope is proportional to Ib. For a fixed central post, the beam trajectory is controlled by varying the outer conductor radius which changes the inductance in the return-current path. The simulations show that the beam emittance is approximately constant as the beam propagates through the current divider to the target. As a result, independent control over both the current density and the beam angle at the target is possible by choosing the appropriate return-current geometry.

  1. Particle-in-cell simulations of electron beam control using an inductive current divider

    DOE PAGES

    Swanekamp, S. B.; Angus, J. R.; Cooperstein, G.; ...

    2015-11-18

    Kinetic, time-dependent, electromagnetic, particle-in-cell simulations of the inductive current divider are presented. The inductive current divider is a passive method for controlling the trajectory of an intense, hollow electron beam using a vacuum structure that inductively splits the beam’s return current. The current divider concept was proposed and studied theoretically in a previous publication [Phys. Plasmas 22, 023107 (2015)] A central post carries a portion of the return current (I1) while the outer conductor carries the remainder (I2) with the injected beam current given by Ib=I1+I2. The simulations are in agreement with the theory which predicts that the total forcemore » on the beam trajectory is proportional to (I2-I1) and the force on the beam envelope is proportional to Ib. For a fixed central post, the beam trajectory is controlled by varying the outer conductor radius which changes the inductance in the return-current path. The simulations show that the beam emittance is approximately constant as the beam propagates through the current divider to the target. As a result, independent control over both the current density and the beam angle at the target is possible by choosing the appropriate return-current geometry.« less

  2. Particle-in-cell Simulations Of Particle Energization From Low Mach Number Fast Mode Shocks

    NASA Astrophysics Data System (ADS)

    Ren, Chuang; Blackman, E.; Park, J.; Siller, R.; Workman, J.

    2012-05-01

    Collisionless perpendicular mangetosonic shocks relevant for termination shocks during solar flares are studied using two-dimensional particle-in-cell simulations with a reduced ion/electron mass ratio and a moving wall boundary condition. Compared to the reflection boundary condition, the moving wall method can control the shock speed and allows for smaller box sizes and longer simulation times in the study of shocks. In a purely perpendicular shock with the Alfven Mach number of 6.8 and plasma beta of 8. Electron and ion acceleration via shock drift acceleration (SDA) is observed. The modified two-stream instability due to the incoming and reflecting ions in the shock transition region is identified to be a possible turbulent dissipation mechanism. We determine the respective minimum energies required for electrons and ions to incur SDA. We derive a theoretical electron distribution via SDA that compares favorably to the simulation results. This work was supported by DOE under Grant DE-FG02-06ER54879 and Cooperate Agreement No. DE-FC52-08NA28302, by NSF under Grant PHY-0903797, and by NSFC under Grant No. 11129503. The research used resources of NERSC. We also thank the OSIRIS consortium for the use of OSIRIS.

  3. Particle-In-Cell Simulation on the Characteristics of a Receiving Antenna in Space Plasma Environment

    SciTech Connect

    Miyake, Yohei; Usui, Hideyuki; Kojima, Hirotsugu; Omura, Yoshiharu

    2008-12-31

    We applied the electromagnetic Particle-In-Cell simulation to the analysis of receiving antenna characteristics in space plasma environment. In the analysis, we set up external waves in a simulation region and receive them with a numerical antenna model placed in the simulation region. Using this method, we evaluated the effective length of electric field antennas used for plasma wave investigations conducted by scientific spacecraft. We particularly focused on the effective length of an electric field instrument called MEFISTO for a future mission to Mercury: BepiColombo. We first confirmed that the effective length of the MEFISTO-type antenna is basically longer than that of a simple dipole antenna for both electrostatic and electromagnetic plasma waves. By applying the principle of a voltmeter, the effective length of the MEFISTO-type antenna is predicted to become identical to the separation between two sensor-conductor's midpoints. However, the numerical result revealed that the actual effective length becomes shorter than the prediction, which is caused by the shorting-out effect due to the presence of a center boom conductor between the two sensor conductors. Since the above effect is difficult to treat theoretically, the present numerical method is a powerful tool for further quantitative evaluation of the antenna characteristics.

  4. Three-dimensional particle-in-cell simulation on gain saturation effect of microchannel plate.

    PubMed

    Wang, Qiangqiang; Yuan, Zheng; Cao, Zhurong; Deng, Bo; Chen, Tao; Deng, Keli

    2016-07-01

    We present here the results of the simulation work, using the three-dimensional particle-in-cell method, on the performance of the lead glass microchannel plate under saturated state. We calculated the electron cascade process with different DC bias voltages under both self-consistent condition and non-self-consistent condition. The comparative results have demonstrated that the strong self-consistent field can suppress the cascade process and make the microchannel plate saturated. The simulation results were also compared to the experimental data and good agreement was obtained. The simulation results also show that the electron multiplication process in the channel is accompanied by the buildup process of positive charges in the channel wall. Though the interactions among the secondary electron cloud in the channel, the positive charges in the channel wall, and the external acceleration field can make the electron-surface collision more frequent, the collision energy will be inevitably reduced, thus the electron gain will also be reduced.

  5. Three-dimensional particle-in-cell simulations of 300 GHz reflex klystrons

    SciTech Connect

    Jeon, S. G.; Jin, Y. S.; Kim, J. I.; Kim, G. J.; Shon, C. H.

    2007-03-01

    Three-dimensional (3D) particle-in-cell simulations of 300 GHz reflex klystrons are presented. 300 GHz electromagnetic wave generation in a resonant cavity is analyzed by using a 3D simulation model in which all the geometric parameters (such as the grid thickness, repeller shape, beam radius, etc.) are described. When an electron beam of an energy of 1.0 keV and a net current of 8.9 mA is used, the maximum electronic efficiency of energy transfer is observed when the gap transit angle is 0.7{pi} rad, and the efficiency saturates when the beam current is over 10 mA. Space charge forces produce a shift in the optimum repeller voltage. It is also shown that the effect of the beam temperature is not critical, even though the bunching wavelength of the electron beam is several times smaller than that in conventional vacuum electron devices. Our simulation results show that a microfabricated 300 GHz reflex klystron can directly generate electromagnetic waves with output power levels of several tens of milliwatts.

  6. Electrostatic particle-in-cell simulation of heat flux mitigation using magnetic fields

    NASA Astrophysics Data System (ADS)

    Lüskow, Karl Felix; Kemnitz, S.; Bandelow, G.; Duras, J.; Kahnfeld, D.; Matthias, P.; Schneider, R.; Konigorski, D.

    2016-10-01

    The particle-in-cell (PIC) method was used to simulate heat flux mitigation experiments with partially ionised argon. The experiments demonstrate the possibility of reducing heat flux towards a target using magnetic fields. Modelling using the PIC method is able to reproduce the heat flux mitigation qualitatively. This is driven by modified electron transport. Electrons are magnetised and react directly to the external magnetic field. In addition, an increase of radial turbulent transport is also needed to explain the experimental observations in the model. Close to the target an increase of electron density is created. Due to quasi-neutrality, ions follow the electrons. Charge exchange collisions couple the dynamics of the neutrals to the ions and reduce the flow velocity of neutrals by radial momentum transport and subsequent losses. By this, the dominant heat-transport channel by neutrals gets reduced and a reduction of the heat deposition, similar to the experiment, is observed. Using the simulation a diagnostic module for optical emission is developed and its results are compared with spectroscopic measurements and photos from the experiment. The results of this study are in good agreement with the experiment. Experimental observations such as a shrank bright emission region close to the nozzle exit, an additional emission in front of the target and an overall change in colour to red are reproduced by the simulation.

  7. Three-dimensional particle-in-cell simulation on gain saturation effect of microchannel plate

    NASA Astrophysics Data System (ADS)

    Wang, Qiangqiang; Yuan, Zheng; Cao, Zhurong; Deng, Bo; Chen, Tao; Deng, Keli

    2016-07-01

    We present here the results of the simulation work, using the three-dimensional particle-in-cell method, on the performance of the lead glass microchannel plate under saturated state. We calculated the electron cascade process with different DC bias voltages under both self-consistent condition and non-self-consistent condition. The comparative results have demonstrated that the strong self-consistent field can suppress the cascade process and make the microchannel plate saturated. The simulation results were also compared to the experimental data and good agreement was obtained. The simulation results also show that the electron multiplication process in the channel is accompanied by the buildup process of positive charges in the channel wall. Though the interactions among the secondary electron cloud in the channel, the positive charges in the channel wall, and the external acceleration field can make the electron-surface collision more frequent, the collision energy will be inevitably reduced, thus the electron gain will also be reduced.

  8. Particle-in-cell simulation of x-ray wakefield acceleration and betatron radiation in nanotubes

    SciTech Connect

    Zhang, Xiaomei; Tajima, Toshiki; Farinella, Deano; Shin, Youngmin; Mourou, Gerard; Wheeler, Jonathan; Taborek, Peter; Chen, Pisin; Dollar, Franklin; Shen, Baifei

    2016-10-18

    Though wakefield acceleration in crystal channels has been previously proposed, x-ray wakefield acceleration has only recently become a realistic possibility since the invention of the single-cycled optical laser compression technique. We investigate the acceleration due to a wakefield induced by a coherent, ultrashort x-ray pulse guided by a nanoscale channel inside a solid material. By two-dimensional particle-in-cell computer simulations, we show that an acceleration gradient of TeV/cm is attainable. This is about 3 orders of magnitude stronger than that of the conventional plasma-based wakefield accelerations, which implies the possibility of an extremely compact scheme to attain ultrahigh energies. In addition to particle acceleration, this scheme can also induce the emission of high energy photons at ~O(10–100) MeV. Here, our simulations confirm such high energy photon emissions, which is in contrast with that induced by the optical laser driven wakefield scheme. In addition to this, the significantly improved emittance of the energetic electrons has been discussed.

  9. Particle-in-cell simulation of x-ray wakefield acceleration and betatron radiation in nanotubes

    DOE PAGES

    Zhang, Xiaomei; Tajima, Toshiki; Farinella, Deano; ...

    2016-10-18

    Though wakefield acceleration in crystal channels has been previously proposed, x-ray wakefield acceleration has only recently become a realistic possibility since the invention of the single-cycled optical laser compression technique. We investigate the acceleration due to a wakefield induced by a coherent, ultrashort x-ray pulse guided by a nanoscale channel inside a solid material. By two-dimensional particle-in-cell computer simulations, we show that an acceleration gradient of TeV/cm is attainable. This is about 3 orders of magnitude stronger than that of the conventional plasma-based wakefield accelerations, which implies the possibility of an extremely compact scheme to attain ultrahigh energies. In additionmore » to particle acceleration, this scheme can also induce the emission of high energy photons at ~O(10–100) MeV. Here, our simulations confirm such high energy photon emissions, which is in contrast with that induced by the optical laser driven wakefield scheme. In addition to this, the significantly improved emittance of the energetic electrons has been discussed.« less

  10. Particle-in-cell Simulations of Raman Laser Amplification in Ionizing Plasmas

    SciTech Connect

    Daniel S. Clark; Nathaniel J. Fisch

    2003-06-27

    By using the amplifying laser pulse in a plasma-based backward Raman laser amplifier to generate the plasma by photo-ionization of a gas simultaneous with the amplification process, possible instabilities of the pumping laser pulse can be avoided. Particle-in-cell simulations are used to study this amplification mechanism, and earlier results using more elementary models of the Raman interaction are verified [D.S. Clark and N.J. Fisch, Phys. Plasmas, 9 (6): 2772-2780, 2002]. The effects (unique to amplification in ionizing plasmas and not included in previous simulations) of blue-shifting of the pump and seed laser pulses and the generation of a wake are observed not significantly to impact the amplification process. As expected theoretically, the peak output intensity is found to be limited to I {approx} 10{sup 17} W/cm{sup 2} by forward Raman scattering of the amplifying seed. The integrity of the ionization front of the seed pulse against the development of a possible transverse modulation instability is also demonstrated.

  11. Electromagnetic particle-in-cell simulations of the solar wind interaction with lunar magnetic anomalies.

    PubMed

    Deca, J; Divin, A; Lapenta, G; Lembège, B; Markidis, S; Horányi, M

    2014-04-18

    We present the first three-dimensional fully kinetic and electromagnetic simulations of the solar wind interaction with lunar crustal magnetic anomalies (LMAs). Using the implicit particle-in-cell code iPic3D, we confirm that LMAs may indeed be strong enough to stand off the solar wind from directly impacting the lunar surface forming a mini-magnetosphere, as suggested by spacecraft observations and theory. In contrast to earlier magnetohydrodynamics and hybrid simulations, the fully kinetic nature of iPic3D allows us to investigate the space charge effects and in particular the electron dynamics dominating the near-surface lunar plasma environment. We describe for the first time the interaction of a dipole model centered just below the lunar surface under plasma conditions such that only the electron population is magnetized. The fully kinetic treatment identifies electromagnetic modes that alter the magnetic field at scales determined by the electron physics. Driven by strong pressure anisotropies, the mini-magnetosphere is unstable over time, leading to only temporal shielding of the surface underneath. Future human exploration as well as lunar science in general therefore hinges on a better understanding of LMAs.

  12. Kinetic Structures of Quasi-Perpendicular Shocks in Global Particle-in-Cell Simulations

    NASA Astrophysics Data System (ADS)

    Peng, I. B.; Markidis, S.; Laure, E.; Johlander, A.; Vaivads, A.; Khotyaintsev, Y. V.; Pierre, H.; Lapenta, G.

    2015-12-01

    We carried out global Particle-in-Cell simulations of the interaction between the solar wind and a magnetosphere to study the kinetic collisionless physics in super-critical quasi-perpendicular shocks. After an initial simulation transient, a collisionless bow shock forms as a result of the interaction of the solar wind and a planet magnetic dipole. The shock ramp has a thickness of approximately one ion skin depth and is followed by a trailing wave train in the shock downstream. At the downstream edge of the bow shock, whistler waves propagate along the magnetic field lines and the presence of electron cyclotron waves has been identified. A small part of the solar wind ion population is specularly reflected by the shock while a larger part is deflected and heated by the shock. Solar wind ions and electrons are heated in the perpendicular directions. Ions are accelerated in the perpendicular direction in the trailing wave train region. This work is an initial effort to study the electron and ion kinetic effects developed near the bow shock in a realistic magnetic field configuration.

  13. Particle-in-cell simulation of x-ray wakefield acceleration and betatron radiation in nanotubes

    NASA Astrophysics Data System (ADS)

    Zhang, Xiaomei; Tajima, Toshiki; Farinella, Deano; Shin, Youngmin; Mourou, Gerard; Wheeler, Jonathan; Taborek, Peter; Chen, Pisin; Dollar, Franklin; Shen, Baifei

    2016-10-01

    Though wakefield acceleration in crystal channels has been previously proposed, x-ray wakefield acceleration has only recently become a realistic possibility since the invention of the single-cycled optical laser compression technique. We investigate the acceleration due to a wakefield induced by a coherent, ultrashort x-ray pulse guided by a nanoscale channel inside a solid material. By two-dimensional particle-in-cell computer simulations, we show that an acceleration gradient of TeV /cm is attainable. This is about 3 orders of magnitude stronger than that of the conventional plasma-based wakefield accelerations, which implies the possibility of an extremely compact scheme to attain ultrahigh energies. In addition to particle acceleration, this scheme can also induce the emission of high energy photons at ˜O (10 - 100 ) MeV . Our simulations confirm such high energy photon emissions, which is in contrast with that induced by the optical laser driven wakefield scheme. In addition to this, the significantly improved emittance of the energetic electrons has been discussed.

  14. 2D Kinetic Particle in Cell Simulations of a Shear-Flow Stabilized Z-Pinch

    NASA Astrophysics Data System (ADS)

    Tummel, Kurt; Higginson, Drew; Schmidt, Andrea; Link, Anthony; McLean, Harry; Shumlak, Uri; Nelson, Brian; Golingo, Raymond; Claveau, Elliot; Lawrence Livermore National Lab Team; University of Washington Team

    2016-10-01

    The Z-pinch is a relatively simple and attractive potential fusion reactor design, but attempts to develop such a reactor have consistently struggled to overcome Z-pinch instabilities. The ``sausage'' and ``kink'' modes are among the most robust and prevalent Z-pinch instabilities, but theory and simulations suggest that axial flow-shear, dvz / dr ≠ 0 , can suppress these modes. Experiments have confirmed that Z-pinch plasmas with embedded axial flow-shear display a significantly enhanced resilience to the sausage and kink modes at a demonstration current of 50kAmps. A new experiment is under way to test the concept at higher current, and efforts to model these plasmas are being expanded. The performance and stability of these devices will depend on features like the plasma viscosity, anomalous resistivity, and finite Larmor radius effects, which are most accurately characterized in kinetic models. To predict these features, kinetic simulations using the particle in cell code LSP are now in development, and initial benchmarking and 2D stability analyses of the sausage mode are presented here. These results represent the first kinetic modeling of the flow-shear stabilized Z-pinch. This work is funded by the USDOE/ARPAe Alpha Program. Prepared by LLNL under Contract DE-AC52-07NA27344.

  15. Particle-in-cell Simulation of Electron Acceleration in Solar Coronal Jets

    NASA Astrophysics Data System (ADS)

    Baumann, G.; Nordlund, Å.

    2012-11-01

    We investigate electron acceleration resulting from three-dimensional magnetic reconnection between an emerging, twisted magnetic flux rope and a pre-existing weak, open magnetic field. We first follow the rise of an unstable, twisted flux tube with a resistive MHD simulation where the numerical resolution is enhanced by using fixed mesh refinement. As in previous MHD investigations of similar situations, the rise of the flux tube into the pre-existing inclined coronal magnetic field results in the formation of a solar coronal jet. A snapshot of the MHD model is then used as an initial and boundary condition for a particle-in-cell simulation, using up to half a billion cells and over 20 billion charged particles. Particle acceleration occurs mainly in the reconnection current sheet, with accelerated electrons displaying a power law in the energy probability distribution with an index of around -1.5. The main acceleration mechanism is a systematic electric field, striving to maintaining the electric current in the current sheet against losses caused by electrons not being able to stay in the current sheet for more than a few seconds at a time.

  16. Hybrid particle-in-cell simulations of weakly collisional shock formation

    NASA Astrophysics Data System (ADS)

    Spisak, Jacob; Valenzuela, Julio; Kim, Joohwan; Beg, Farhat

    2016-10-01

    Recently, we studied shock formation by the head on collision of supersonic plasma jets using a wire configuration on the compact current driver GenASIS (200 kA in 150 ns). We used two wire materials: aluminum, where radiative cooling is not significant, and copper, where radiation is important to shock dynamics. In both cases, when the jets collide a conical structure develops in time and moves towards the cathode at a speed of 20km/s. Radiation effects are apparent in the copper case, as the shock is thinner than in the Aluminum case and when it starts moving a prominent bow shock develops. Furthermore, the estimated inter jet ion mean free path is larger than the shock width, indicating a magnetic field may help mediate the shock. To investigate the physics of weakly collisional shock formation, we perform two dimensional simulations of two merging, counter-propagating jets using the initial conditions from the experiment. Electrons are treated as a fluid and ions are treated as kinetic particles using the hybrid particle in cell code LSP. We explore how shock formation is affected by radiative cooling and the presence of an external magnetic field. We also carried out simulations where both ions and electrons were treated as fluids. This work was partially financed by Department of Energy Grant Number DE-SC0014493.

  17. Kinetic structures of quasi-perpendicular shocks in global particle-in-cell simulations

    SciTech Connect

    Peng, Ivy Bo Markidis, Stefano; Laure, Erwin; Johlander, Andreas; Vaivads, Andris; Khotyaintsev, Yuri; Henri, Pierre; Lapenta, Giovanni

    2015-09-15

    We carried out global Particle-in-Cell simulations of the interaction between the solar wind and a magnetosphere to study the kinetic collisionless physics in super-critical quasi-perpendicular shocks. After an initial simulation transient, a collisionless bow shock forms as a result of the interaction of the solar wind and a planet magnetic dipole. The shock ramp has a thickness of approximately one ion skin depth and is followed by a trailing wave train in the shock downstream. At the downstream edge of the bow shock, whistler waves propagate along the magnetic field lines and the presence of electron cyclotron waves has been identified. A small part of the solar wind ion population is specularly reflected by the shock while a larger part is deflected and heated by the shock. Solar wind ions and electrons are heated in the perpendicular directions. Ions are accelerated in the perpendicular direction in the trailing wave train region. This work is an initial effort to study the electron and ion kinetic effects developed near the bow shock in a realistic magnetic field configuration.

  18. Particle-in-cell Simulations of Raman Laser Amplification in Preformed Plasmas

    SciTech Connect

    Daniel S. Clark; Nathaniel J. Fisch

    2003-06-27

    Two critical issues in the amplification of laser pulses by backward Raman scattering in plasma slabs are the saturation mechanism of the amplification effect (which determines the maximum attainable output intensity of a Raman amplifier) and the optimal plasma density for amplification. Previous investigations [V.M. Malkin, et al., Phys. Rev. Lett., 82 (22):4448-4451, 1999] identified forward Raman scattering and modulational instabilities of the amplifying seed as the likely saturation mechanisms and lead to an estimated unfocused output intensities of 10{sup 17}W/cm{sup 2}. The optimal density for amplification is determined by the competing constraints of minimizing the plasma density so as to minimize the growth rate of the instabilities leading to saturation but also maintaining the plasma sufficiently dense that the driven Langmuir wave responsible for backscattering does not break prematurely. Here, particle-in-cell code are simulations presented which verify that saturation of backward Raman amplification does occur at intensities of {approx}10{sup 17}W/cm{sup 2} by forward Raman scattering and modulational instabilities. The optimal density for amplification in a plasma with the representative temperature of T(sub)e = 200 eV is also shown in these simulations to be intermediate between the cold plasma wave-breaking density and the density limit found by assuming a water bag electron distribution function.

  19. Magnetohydrodynamics with Embedded Particle-in-Cell Simulation of Mercury's Magnetosphere

    NASA Astrophysics Data System (ADS)

    Chen, Y.; Toth, G.; Jia, X.; Gombosi, T. I.; Markidis, S.

    2015-12-01

    Mercury's magnetosphere is much more dynamic than other planetary magnetospheres because of Mercury's weak intrinsic magnetic field and its proximity to the Sun. Magnetic reconnection and Kelvin-Helmholtz phenomena occur in Mercury's magnetopause and magnetotail at higher frequencies than in other planetary magnetosphere. For instance, chains of flux transfer events (FTEs) on the magnetopause, have been frequentlyobserved by the the MErcury Surface, Space ENvironment, GEochemistry and Ranging (MESSENGER) spacecraft (Slavin et al., 2012). Because ion Larmor radius is comparable to typical spatial scales in Mercury's magnetosphere, finite Larmor radius effects need to be accounted for. In addition, it is important to take in account non-ideal dissipation mechanisms to accurately describe magnetic reconnection. A kinetic approach allows us to model these phenomena accurately. However, kinetic global simulations, even for small-size magnetospheres like Mercury's, are currently unfeasible because of the high computational cost. In this work, we carry out global simulations of Mercury's magnetosphere with the recently developed MHD-EPIC model, which is a two-way coupling of the extended magnetohydrodynamic (XMHD) code BATS-R-US with the implicit Particle-in-Cell (PIC) model iPIC3D. The PIC model can cover the regions where kinetic effects are most important, such as reconnection sites. The BATS-R-US code, on the other hand, can efficiently handle the rest of the computational domain where the MHD or Hall MHD description is sufficient. We will present our preliminary results and comparison with MESSENGER observations.

  20. The Plasma Simulation Code: A modern particle-in-cell code with patch-based load-balancing

    NASA Astrophysics Data System (ADS)

    Germaschewski, Kai; Fox, William; Abbott, Stephen; Ahmadi, Narges; Maynard, Kristofor; Wang, Liang; Ruhl, Hartmut; Bhattacharjee, Amitava

    2016-08-01

    This work describes the Plasma Simulation Code (PSC), an explicit, electromagnetic particle-in-cell code with support for different order particle shape functions. We review the basic components of the particle-in-cell method as well as the computational architecture of the PSC code that allows support for modular algorithms and data structure in the code. We then describe and analyze in detail a distinguishing feature of PSC: patch-based load balancing using space-filling curves which is shown to lead to major efficiency gains over unbalanced methods and a previously used simpler balancing method.

  1. Particle-in-cell simulation of collisionless reconnection with open outflow boundaries

    SciTech Connect

    Klimas, Alex; Hesse, Michael; Zenitani, Seiji

    2008-08-15

    A new method for applying open boundary conditions in particle-in-cell (PIC) simulations is utilized to study magnetic reconnection. Particle distributions are assumed to have zero normal derivatives at the boundaries. Advantages and possible limitations of this method for PIC simulations are discussed. Results from a reconnection simulation study are presented. For the purpose of this investigation, a 2 (1/2)-dimensional electromagnetic PIC simulation using open conditions at the outflow boundaries and simple reflecting boundaries to the inflow regions is discussed. The electron diffusion region is defined as that region where the out-of-plane electron inertial electric field is positive indicating acceleration and flux transfer; the evolution of this region is analyzed. It is found that this region varies in the range 2.5-4 local electron inertial lengths in total width and in the range 10-15 local electron inertial lengths in total length for the mass ratio 25. The reconnection rate is investigated in terms of the aspect ratio of the electron diffusion region plus inflow and outflow measures at its boundaries. It is shown that a properly measured aspect ratio predicts the flux transfer rate, scaled to account for the decline in field strength and electron density at the inflow boundary to the electron diffusion region. It is concluded that this electron diffusion region either adjusts its aspect ratio for compatibility with the flux transfer rate that is set elsewhere, as in the Hall reconnection model, or that it is this region that controls the reconnection flux transfer rate.

  2. Particle-in-cell simulation of coherent and superradiant Smith-Purcell radiation

    NASA Astrophysics Data System (ADS)

    Li, D.; Yang, Z.; Imasaki, K.; Park, Gun-Sik

    2006-04-01

    This paper presents a study of coherent and superradiant Smith-Purcell (SP) radiation with the help of a two-dimensional particle-in-cell (PIC) simulation. The simulation model supposes a rectangular grating with period length of 173μm to be driven by a single electron bunch, a train of periodic bunches and a continuous beam, respectively. We chose 40 keV as the initial energy of electrons and therefore the SP radiation frequency falls in the THz regime. From our single bunch simulation we distinguish the true SP radiation separated in time from the emission of the evanescent wave. The evanescent wave radiates from both ends of the grating and is characterized by an angle independent frequency lower than the minimum allowed SP frequency. In order to avoid the buildup of beam bunching from an initially continuous beam, we use a train of periodic bunches to excite the grating and observe the superradiant phenomenon. The repetition frequency of the spatially periodic bunches is assumed to be 300 GHz. We find that the superradiant radiation is only emitted at higher harmonics of this frequency and at the corresponding SP angles. This result conforms to the viewpoint of Andrews and co-workers. The simulation with a continuous beam shows the dependence of the output power on the beam current. The power curve shows two regimes, one for the incoherent SP radiation and the other for the superradiance, which resembles the Dartmouth experimental result. And furthermore, the frequency spectrum shows an apparent difference for the two regimes, which is in contrast to the observations of Urata and co-workers.

  3. Physics based optimization of Particle-in-Cell simulations on GPUs

    NASA Astrophysics Data System (ADS)

    Abbott, Stephen; D'Azevedo, Ed

    2016-10-01

    We present progress in improving the performance of the gyrokinetic particle-in-cell (PIC) code XGC-1 on NVIDIA GPUs, as well as enhancements made to portability and developer productivity using OpenACC directives. Increasingly simulation codes are required to use heterogeneous accelerator resources on the most powerful supercomputing systems. PIC methods are well suited to these massively parallel accelerator architectures, as particles can largely be advanced independently within a time-step. Their advance must still, however, reference field data on underlying grid structures, which presents a significant performance bottleneck. Even ported to GPUs using CUDA Fortran, the XGC-1 electron push routine accounts for a significant portion of the code execution time. By applying physical insight to the motion of electrons across the device (and therefore field grids) we have developed techniques that increase performance of this kernel by up to 5X, compared to the original CUDA Fortran implementation. Architecture specific optimizations can be isolated in small `leaf' routines, which allows for a portable OpenACC implementation that performs nearly as well as the optimized CUDA.

  4. Parallel mesh support for particle-in-cell methods in magnetic fusion simulations

    NASA Astrophysics Data System (ADS)

    Yoon, Eisung; Shephard, Mark S.; Seol, E. Seegyoung; Kalyanaraman, Kaushik; Ibanez, Daniel

    2016-10-01

    As supercomputing power continues to increase Particle-In-Cell (PIC) methods are being widely adopted for transport simulations of magnetic fusion devices. Current implementations place a copy of the entire continuum mesh and its fields used in the PIC calculations on every node. This is in general not a scalable solution as computational power continues to grow faster than node level memory. To address this scalability issue, while still maintaining sufficient mesh per node to control costly inter-node communication, a new unstructured mesh distribution methods and associated mesh based PIC calculation procedure is being developed building on the parallel unstructured mesh infrastructure (PUMI). Key components to be outlined in the presentation include (i) the mesh distribution strategy, (ii) how the particles are tracked during a push cycle taking advantage of the unstructured mesh adjacency structures and searches based on that structure, and (iii) how the field solve steps and particle migration are controlled. Performance comparisons to the current approach will also be presented.

  5. Particle-In-Cell simulation concerning heat-flux mitigation using electromagnetic fields

    NASA Astrophysics Data System (ADS)

    Lüskow, Karl Felix; Duras, Julia; Kemnitz, Stefan; Kahnfeld, Daniel; Matthias, Paul; Bandelow, Gunnas; Schneider, Ralf; Konigorski, Detlev

    2016-10-01

    In space missions enormous amount of money is spent for the thermal protection system for re-entry. To avoid complex materials and save money one idea is to reduce the heat-flux towards the spacecraft. The partially-ionized gas can be controlled by electromagnetic fields. For first-principle tests partially ionized argon flow from an arc-jet was used to measure the heat-flux mitigation created by an external magnetic field. In the successful experiment a reduction of 85% was measured. In this work the Particle-in-Cell (PIC) method was used to simulate this experiment. PIC is able to reproduce the heat flux mitigation qualitatively. The main mechanism is identified as a changed electron transport and by this, modified electron density due to the reaction to the applied magnetic field. Ions follow due to quasi-neutrality and influence then strongly by charge exchange collisions the neutrals dynamics and heat deposition. This work was supported by the German Space Agency DLR through Project 50RS1508.

  6. Comparison of dust charging between orbital-motion-limited theory and particle-in-cell simulations

    SciTech Connect

    Delzanno, Gian Luca Tang, Xian-Zhu

    2015-11-15

    The Orbital-Motion-Limited (OML) theory has been modified to predict the dust charge and the results were contrasted with the Whipple approximation [X. Z. Tang and G. L. Delzanno, Phys. Plasmas 21, 123708 (2014)]. To further establish its regime of applicability, in this paper, the OML predictions (for a non-electron-emitting, spherical dust grain at rest in a collisionless, unmagnetized plasma) are compared with particle-in-cell simulations that retain the absorption radius effect. It is found that for large dust grain radius r{sub d} relative to the plasma Debye length λ{sub D}, the revised OML theory remains a very good approximation as, for the parameters considered (r{sub d}/λ{sub D} ≤ 10, equal electron and ion temperatures), it yields the dust charge to within 20% accuracy. This is a substantial improvement over the Whipple approximation. The dust collected currents and energy fluxes, which remain the same in the revised and standard OML theories, are accurate to within 15%–30%.

  7. Particle-in-cell simulation of collisionless driven reconnection with open boundaries

    SciTech Connect

    Klimas, Alex; Zenitani, Seiji; Hesse, Michael; Kuznetsova, Maria

    2010-11-15

    First results are discussed from an ongoing study of driven collisionless reconnection using a 2(1/2)-dimensional electromagnetic particle-in-cell simulation model with open inflow and outflow boundaries. An extended electron diffusion region (EEDR) is defined as that region surrounding a reconnecting neutral line in which the out-of-plane nonideal electric field is positive. It is shown that the boundaries of this region in the directions of the outflow jets are at the positions where the electrons make the transition from unfrozen meandering motion in the current sheet to outward drifting with the magnetic field in the outflow jets; a turning length scale is defined to mark these positions. The initial width of the EEDR in the inflow directions is comparable to the electron bounce width. Later, as shoulders develop to form a two-scale structure, the EEDR width expands to the ion bounce width scale. The inner portion of the EEDR or the electron diffusion region proper remains at the electron bounce width. Two methods are introduced for predicting the reconnection electric field using the dimensions of the EEDR. These results are interpreted as further evidence that the EEDR is the region that is relevant to understanding the electron role in the neutral line vicinity.

  8. Open Boundary Particle-in-Cell Simulation of Dipolarization Front Propagation

    NASA Technical Reports Server (NTRS)

    Klimas, Alex; Hwang, Kyoung-Joo; Vinas, Adolfo F.; Goldstein, Melvyn L.

    2014-01-01

    First results are presented from an ongoing open boundary 2-1/2D particle-in-cell simulation study of dipolarization front (DF) propagation in Earth's magnetotail. At this stage, this study is focused on the compression, or pileup, region preceding the DF current sheet. We find that the earthward acceleration of the plasma in this region is in general agreement with a recent DF force balance model. A gyrophase bunched reflected ion population at the leading edge of the pileup region is reflected by a normal electric field in the pileup region itself, rather than through an interaction with the current sheet. We discuss plasma wave activity at the leading edge of the pileup region that may be driven by gradients, or by reflected ions, or both; the mode has not been identified. The waves oscillate near but above the ion cyclotron frequency with wavelength several ion inertial lengths. We show that the waves oscillate primarily in the perpendicular magnetic field components, do not propagate along the background magnetic field, are right handed elliptically (close to circularly) polarized, exist in a region of high electron and ion beta, and are stationary in the plasma frame moving earthward. We discuss the possibility that the waves are present in plasma sheet data, but have not, thus far, been discovered.

  9. Particle-in-Cell Simulation of Collisionless Driven Reconnection with Open Boundaries

    NASA Technical Reports Server (NTRS)

    Kimas, Alex; Hesse, Michael; Zenitani, Seiji; Kuznetsova, Maria

    2010-01-01

    First results are discussed from an ongoing study of driven collisionless reconnection using a 2 1/2-dimensional electromagnetic particle-in-cell simulation model with open inflow and outflow boundaries. An extended electron diffusion region (EEDR) is defined as that region surrounding a reconnecting neutral line in which the out-of-plane nonideal electric field is positive. It is shown that the boundaries of this region in the directions of the outflow jets are at the positions where the electrons make the transition from unfrozen meandering motion in the current sheet to outward drifting with the magnetic field in the outflow jets; a turning length scale is defined to mark these positions, The initial width of the EEDR in the inflow directions is comparable to the electron bounce width. Later. as shoulders develop to form a two-scale structure. thc EEDR width expands to the ion bounce width scale. The inner portion of the EEDR or the electron diffusion region proper remains at the electron bounce width. Two methods are introduced for predicting the reconnection electric field using the dimensions of the EEDR. These results are interpreted as further evidence that the EEDR is the region that is relevant to understanding the electron role in the neutral line vicinity.

  10. Nonlinear kinetic effects in inductively coupled plasmas via particle-in-cell simulations

    NASA Astrophysics Data System (ADS)

    Froese, Aaron; Smolyakov, Andrei; Sydorenko, Dmytro

    2007-11-01

    Kinetic effects in inductively coupled plasmas due to thermal motion of particles modified by self-consistent magnetic fields are studied using a particle-in-cell code. In the low pressure, low frequency regime, electron mean free paths are large relative to device size and the trajectories are strongly curved by the induced rf magnetic field. Analytic linear theories are unable to recover effects accumulated along each nonlinear path. Therefore, the simulated ICP is made progressively more complex to find the source of observed plasma behaviours. With only thermal motion modifying the wave-particle interaction, nonlocal behaviour becomes dominant at low frequencies, causing an anomalous skin effect with increased skin depth and power absorption and decreased ponderomotive force. However, when influenced by magnetic fields, the nonlocal effects are suppressed at large wave amplitudes due to nonlinear trapping. A mechanism is proposed for this low frequency restoration of local behaviour. Finally, a low rate of electron-neutral collisions is found to counteract the nonlinear behaviour, and hence reinforces nonlocal behaviour.

  11. Investigation of Parametric Excitation of Whistler Waves Using 3D Particle-In-Cell Simulations

    NASA Astrophysics Data System (ADS)

    Caplinger, James; Sotnikov, Vladimir; Main, Daniel; Rose, David; Paraschiv, Ioana

    2016-10-01

    Previous theoretical work has shown that a parametric interaction between quasi-electrostatic lower oblique resonance (LOR) and lower frequency (ω < ωLH) ion acoustic or extremely low frequency (ELF) waves can produce electromagnetic whistler waves in a cold magnetized plasma. It was also demonstrated theoretically that this interaction can more efficiently generate electromagnetic whistler waves than by direct excitation by a conventional loop antenna, operating at a single frequency. For the purpose of numerically validating the above result, a series of particle-in-cell simulations were carried out. We first demonstrate the ability to accurately model whistler wave excitation producing the familiar resonant surfaces which comprise the LOR using a modeled loop antenna. Next we demonstrate the ability to generate ion acoustic waves as well as ELF waves, both of which are shown to agree with the expected linear dispersion relations. Finally, we investigate the existence of any nonlinear interaction which indicates the desired parametric excitation and attempt to analyze the efficiency of this method of excitation and radiated power going into the whistler part of the VLF wave spectrum.

  12. Electron Debye scale Kelvin-Helmholtz instability: Electrostatic particle-in-cell simulations

    SciTech Connect

    Lee, Sang-Yun; Lee, Ensang Kim, Khan-Hyuk; Lee, Dong-Hun; Seon, Jongho; Jin, Ho

    2015-12-15

    In this paper, we investigated the electron Debye scale Kelvin-Helmholtz (KH) instability using two-dimensional electrostatic particle-in-cell simulations. We introduced a velocity shear layer with a thickness comparable to the electron Debye length and examined the generation of the KH instability. The KH instability occurs in a similar manner as observed in the KH instabilities in fluid or ion scales producing surface waves and rolled-up vortices. The strength and growth rate of the electron Debye scale KH instability is affected by the structure of the velocity shear layer. The strength depends on the magnitude of the velocity and the growth rate on the velocity gradient of the shear layer. However, the development of the electron Debye scale KH instability is mainly determined by the electric field generated by charge separation. Significant mixing of electrons occurs across the shear layer, and a fraction of electrons can penetrate deeply into the opposite side fairly far from the vortices across the shear layer.

  13. Numerical Uncertainty Estimation for Stochastic Particle-in-Cell Simulations Applied to Verification and Validation

    NASA Astrophysics Data System (ADS)

    Cartwright, Keith

    2015-09-01

    Numerical error estimation is a key component in verification, validation, and uncertainty quantification. For ParticleIn-Cell (PIC) plasma simulations, error estimation is complicated due to the presence of stochastic noise and multiple convergence parameters (grid size, time step, macro particle weight). In this talk, we will discuss recent developments for the Stochastic Richardson Extrapolation Based Error Quantification method (StREEQ). This method at its core is a multi-regression technique, where nine regression models and multiple bootstrap samples propagate uncertainties due to the fit and the stochasticity of the underlying data for an appropriate error model with unknown convergence rates. Recently, automation of the convergence parameter domain selection has been implemented; this enables efficient error estimation for large data sets, including analysis of multiple quantities of interest and time dependent data. This method is demonstrated for verification of both steady and time-periodic electron diodes, as well as validation of radiation generated plasma in an end-radiated cylinder. In collaboration with Gregg Radtke, Sandia National Laboratories. Sandia National Laboratories is a multi-program laboratory managed and operated by Sandia Corporation, a wholly owned subsidiary of Lockheed Martin Corporation, for the U.S. DOE's National Nuclear Security Administration under Contract DE-AC04-94AL85000.

  14. Electron Debye scale Kelvin-Helmholtz instability: Electrostatic particle-in-cell simulations

    NASA Astrophysics Data System (ADS)

    Lee, Sang-Yun; Lee, Ensang; Kim, Khan-Hyuk; Lee, Dong-Hun; Seon, Jongho; Jin, Ho

    2015-12-01

    In this paper, we investigated the electron Debye scale Kelvin-Helmholtz (KH) instability using two-dimensional electrostatic particle-in-cell simulations. We introduced a velocity shear layer with a thickness comparable to the electron Debye length and examined the generation of the KH instability. The KH instability occurs in a similar manner as observed in the KH instabilities in fluid or ion scales producing surface waves and rolled-up vortices. The strength and growth rate of the electron Debye scale KH instability is affected by the structure of the velocity shear layer. The strength depends on the magnitude of the velocity and the growth rate on the velocity gradient of the shear layer. However, the development of the electron Debye scale KH instability is mainly determined by the electric field generated by charge separation. Significant mixing of electrons occurs across the shear layer, and a fraction of electrons can penetrate deeply into the opposite side fairly far from the vortices across the shear layer.

  15. Particle-In-Cell Simulations on Electric Field Antenna Characteristics in the Spacecraft Environment

    NASA Astrophysics Data System (ADS)

    Miyake, Y.; Usui, H.; Kojima, H.; Omura, Y.; Matsumoto, H.

    2006-12-01

    The Solar Terrestrial Physics (STP) group in Japan has organized a new magnetospheric mission named SCOPE whose objective is to investigate the scale-coupling process of plasma dynamics in the Terrestrial magnetosphere. For the sophisticated electric field measurements planned in the SCOPE mission, we have to investigate the antenna characteristics which are essential for the precise calibration of observed data. Particularly, (1) realistic antenna geometries including spacecraft body and (2) inhomogeneous plasma environment created by plasma-spacecraft interactions should be taken into consideration in the antenna analysis for application to the scientific mission. However, the analysis of the antenna impedance is very complex because the plasma is a dispersive and anisotropic medium, and thus it is too difficult to consider the realistic plasma environment near the spacecraft by the theoretical approaches. In the present study, we apply the Particle-In-Cell simulations to the antenna analysis, which enables us to treat the antenna model including a spacecraft body and analyze the effects of photoelectron emission on antenna characteristics. The present antenna model consists of perfect conducting antennas and spacecraft body, and the photoelectron emission from the sunlit surfaces is also modeled. Using these models, we first performed the electrostatic simulations and examined the photoelectron environment around the spacecraft. Next, the antenna impedance under the obtained photoelectron environment was examined by the electromagnetic simulations. Impedance values obtained in photoelectron environment were much different from those in free space, and they were analogous to the impedance characteristics of an equivalent electric circuit consisting of a resistance and capacitance connected in parallel. The validity of the obtained values has been examined by the comparison with the measurements by the scientific spacecraft.

  16. Self-consistent particle-in-cell simulations of fundamental and harmonic plasma radio emission mechanisms

    NASA Astrophysics Data System (ADS)

    Thurgood, J. O.; Tsiklauri, D.

    2015-12-01

    Aims: The simulation of three-wave interaction based plasma emission, thought to be the underlying mechanism for Type III solar radio bursts, is a challenging task requiring fully-kinetic, multi-dimensional models. This paper aims to resolve a contradiction in past attempts, whereby some studies indicate that no such processes occur. Methods: We self-consistently simulate three-wave based plasma emission through all stages by using 2D, fully kinetic, electromagnetic particle-in-cell simulations of relaxing electron beams using the EPOCH2D code. Results: Here we present the results of two simulations; Run 1 (nb/n0 = 0.0057, vb/ Δvb = vb/Ve = 16) and Run 2 (nb/n0 = 0.05, vb/ Δvb = vb/Ve = 8), which we find to permit and prohibit plasma emission respectively. We show that the possibility of plasma emission is contingent upon the frequency of the initial electrostatic waves generated by the bump-in-tail instability, and that these waves may be prohibited from participating in the necessary three-wave interactions due to frequency conservation requirements. In resolving this apparent contradiction through a comprehensive analysis, in this paper we present the first self-consistent demonstration of fundamental and harmonic plasma emission from a single-beam system via fully kinetic numerical simulation. We caution against simulating astrophysical radio bursts using unrealistically dense beams (a common approach which reduces run time), as the resulting non-Langmuir characteristics of the initial wave modes significantly suppresses emission. Comparison of our results also indicates that, contrary to the suggestions of previous authors, an alternative plasma emission mechanism based on two counter-propagating beams is unnecessary in an astrophysical context. Finally, we also consider the action of the Weibel instability which generates an electromagnetic beam mode. As this provides a stronger contribution to electromagnetic energy than the emission, we stress that

  17. Delta-f particle-in-cell simulation of X-B mode conversion

    NASA Astrophysics Data System (ADS)

    Xiang, N.; Cary, J. R.; Barnes, D. C.; Carlsson, J.

    2006-04-01

    Low-noise, delta-f particle-in-cell algorithm has been implemented in VORPAL, a massive parallel, hybrid plasma modeling code (Chet Nieter and John. R. Cary, J. Comp. Physics 196, 448 (2004)). This computation method allows us to simulate the mode conversion between the extraordinary wave (X) and electron Bernstein wave (EBW) in both linear and nonlinear regimes. In the linear regime, it is found that a full X-B mode conversion can be obtained for optimized parameters as φ/φce<2 (φ is the driving frequency and φce is the electron cyclotron frequency). No 100% conversion is found for φ/φce moderately larger than 2. The simulation results agree with the predictions of Ram's theory (Ram & Schultz, Phys. Plasma 4084 (2000)). The agreement indicates that X-B mode conversion can be well described by the quadratic wave equation based on cold plasma approximation, and this is consistent with the phase-space picture of mode conversion. It is also shown that the conversion efficiency is significantly affected by the gradient of magnetic fields. When the amplitude of the incident X wave increases, it is shown that the nonlinear self-interaction of the electron converted EBW gives rise to the second harmonic generation at a pump power as low as three orders smaller than the electron thermal energy. If the fundamental EBW is sufficiently large, the non-propagating third and fourth harmonic modes are also generated. *The work was supported by DOE Contract No.DE-FG02-04ER54735.

  18. Revealing the sub-structures of the magnetic reconnection separatrix via particle-in-cell simulation

    SciTech Connect

    Zhou, M.; Deng, X. H.; Pang, Y.; Xu, X. J.; Yao, M.; Huang, S. Y.; Yuan, Z. G.; Li, H. M.; Wang, D. D.; Wang, Y. H.

    2012-07-15

    Magnetic separatrix is an important boundary layer separating the inflow and outflow regions in magnetic reconnection. In this article, we investigate the sub-structures of the separatrix region by using two-and-half dimensional electromagnetic particle-in-cell simulation. The separatrix region can be divided into two sub-regions in terms of the ion and electron frozen-in conditions. Far from the neutral sheet, ions and electrons are magnetized in magnetic fields. Approaching the neutral sheet, ion frozen-in condition is broken in a narrow region ({approx}c/{omega}{sub pi}) at the edge of a density cavity, while electrons are frozen-in to magnetic fields. In this region, electric field E{sub z} is around zero, and the convective term -(v{sub i} Multiplication-Sign B) is balanced by the Hall term in the generalized Ohm's law because ions carry the perpendicular current. Inside the density cavity, both ion and electron frozen-in conditions are broken. The region consists of two sub-ion or electron-scale layers, which contain intense electric fields. Formation of the two sub-layers is due to the complex electron flow pattern around the separatrix region. In the layer, E{sub z} is balanced by a combination of Hall term and the divergence of electron pressure tensor, with the Hall term being dominant. Our preliminary simulation result shows that the separatrix region in guide field reconnection also contains two sub-regions: the inner region and the outer region. However, the inner region contains only one current layer in contrast with the case without guide field.

  19. Ab Initio Petaflop-scale Particle-in-Cell Simulation of Laser-Plasma Interaction

    NASA Astrophysics Data System (ADS)

    Albright, Brian

    2008-11-01

    Large three-dimensional (3D) particle-in-cell (PIC) simulations have been performed using the VPIC code on some of the world's largest supercomputers, including the Roadrunner supercomputer, the first machine capable of a petaflop/s. These simulations have revealed the complex physical mechanisms underlying laser-plasma interactions and show an emerging universal picture of nonlinear saturation of LPI in the kinetic regime. Moreover, with the advent of peta-scale computing, we are entering an era of ``at-scale'' modeling necessary to understand the essential nonlinearity of LPI in solitary laser speckles, the building-blocks of multi-speckle beams. Under NIF-relevant conditions, stimulated Raman scattering (SRS) vs. speckle intensity shows a sharp onset at a threshold intensity (below linear estimates) and saturation at higher intensity, as validated in Trident experiments. Wavefront bowing of electron plasma waves (EPW) from trapped electron nonlinear frequency shift and amplitude-dependent damping is observed in 3D. This is followed by trapped particle modulational instability, which evolves nonlinearly into self-focusing, rapid transverse EPW phase variation, increased loss of trapped electrons, and EPW damping. In 3D, EPW turbulence may also exhibit loss of coherence through azimuthal filamentation. This reduction of source coherence for backscattered light and increased damping limit how much backscatter can obtain in a speckle. In addition, 3D modeling of novel ultraintense laser-ion acceleration mechanisms will be shown. Collaborators: L. Yin, K. J. Bowers, B. Bergen, D. S. Montgomery, J. L. Kline, H. A. Rose, B. M. Hegelich, K. A. Flippo, J. C. Fern'andez.

  20. Particle in Cell Simulations of the Pulsar Y-Point -- Nature of the Accelerating Electric Field

    NASA Astrophysics Data System (ADS)

    Belyaev, Mikhail

    2016-06-01

    Over the last decade, satellite observations have yielded a wealth of data on pulsed high-energy emission from pulsars. Several different models have been advanced to fit this data, all of which “paint” the emitting region onto a different portion of the magnetosphere.In the last few years, particle in cell simulations of pulsar magnetospheres have reached the point where they are able to self-consistently model particle acceleration and dissipation. One of the key findings of these simulations is that the region of the current sheet in and around the Y-point provides the highest rate of dissipation of Poynting flux (Belyaev 2015a). On the basis of this physical evidence, it is quite plausible that this region should be associated with the pulsed high energy emission from pulsars. We present high resolution PIC simulations of an axisymmetric pulsar magnetosphere, which are run using PICsar (Belyaev 2015b). These simulations focus on the particle dynamics and electric fields in and around the Y-point region. We run two types of simulations -- first, a force-free magnetosphere and second, a magnetosphere with a gap between the return current layer and the outflowing plasma in the polar wind zone. The latter setup is motivated by studies of pair production with general relativity (Philippov et al. 2015, Belyaev & Parfrey (in preparation)). In both cases, we find that the Y-point and the current sheet in its direct vicinity act like an “electric particle filter” outwardly accelerating particles of one sign of charge while returning the other sign of charge back to the pulsar. We argue that this is a natural behavior of the plasma as it tries to adjust to a solution that is as close to force-free as possible. As a consequence, a large E dot J develops in the vicinity of the Y-point leading to dissipation of Poynting flux. Our work is relevant for explaining the plasma physical mechanisms underlying pulsed high energy emission from pulsars.

  1. Magnetospheric Simulations With the Three-Dimensional Magnetohydrodynamics With Embedded Particle-in-Cell Model

    NASA Astrophysics Data System (ADS)

    Toth, G.; Jia, X.; Chen, Y.; Markidis, S.; Peng, B.; Daldorff, L. K. S.; Tenishev, V.; Borovikov, D.; Haiducek, J. D.; Gombosi, T. I.; Glocer, A.; Dorelli, J.; Lapenta, G.

    2015-12-01

    We have recently developed a new modeling capability to embed the implicit Particle-in-Cell (PIC) model iPIC3D into the BATS-R-US magnetohydrodynamic model. The PIC domain can cover the regions where kinetic effects are most important, such as reconnection sites. The BATS-R-US code, on the other hand, can efficiently handle the rest of the computational domain where the MHD or Hall MHD description is sufficient with its block-adaptive grid. The current implementation of the MHD-EPIC model allows two-way coupled simulations in two and three dimensions with multiple embedded PIC regions. The MHD and PIC grids can have different grid resolutions. The MHD variables and the moments of the PIC distribution functions are interpolated and message passed in an efficient manner through the Space Weather Modeling Framework (SWMF). Both BATS-R-US and iPIC3D are massively parallel codes fully integrated into, run by and coupled through the SWMF. We have successfully applied the MHD-EPIC code to model Ganymede's magnetosphere. Using four PIC regions we have in effect performed a fully kinetic simulation of the moon's mini-magnetosphere with a grid resolution that is about 5 times finer than the ion inertial length. The Hall MHD model provides proper boundary conditions for the four PIC regions and connects them with each other and with the inner and outer outer boundary conditions of the much larger MHD domain. We compare our results with Galileo magnetic observations and find good overall agreement with both Hall MHD and MHD-EPIC simulations. The power spectrum for the small scale fluctuations, however, agrees with the data much better for the MHD-EPIC simulation than for Hall MHD. In the MHD-EPIC simulation, unlike in the pure Hall MHD results, we also find signatures of flux transfer events (FTEs) that agree very well with the observed FTE signatures both in terms of shape and amplitudes. We will also highlight our ongoing efforts to model the magnetospheres of Mercury and

  2. Transverse instability and the structure of two-dimensional electron holes: particle-in-cell simulations

    NASA Astrophysics Data System (ADS)

    Lu, Q.; Wu, M.; Huang, C.; Wang, S.

    2011-12-01

    A multi-dimensional electron phase-space hole (electron hole) is considered to be unstable to the transverse instability. We perform two-dimensional (2D) particle-in-cell (PIC) simulations to study the evolution of electron holes at different plasma conditions; we find that the evolution is determined by combined actions between the transverse instability and the stabilization by the ackground magnetic field. In very weakly magnetized plasma, the transverse instability dominates the evolution of the electron holes. The parallel cut of the perpendicular electric field has bipolar structures, accompanied by the kinking of the electron holes. Such structures last for only tens of electron plasma periods. With the increase of the background magnetic field, the evolution of the electron holes becomes slower. The bipolar structures of the parallel cut of the perpendicular electric field in the electron holes can evolve into unipolar structures. In very strongly magnetized plasma, the unipolar structures of the parallel cut of the perpendicular electric field can last for thousands of electron plasma periods. At the same time, the perpendicular electric field in the electron holes can also influence electron trajectories passing through the electron holes, which results in variations of charge density along the direction perpendicular to the background magnetic field outside of the electron holes. When the amplitude of the electron hole is sufficiently strong, streaked structures of the perpendicular electric field can be formed outside of the electron holes, which then emit electrostatic whistler waves because of the interactions between the streaked structures of the perpendicular electric field and vibrations of the kinked electron holes.

  3. AB INITIO PULSAR MAGNETOSPHERE: THREE-DIMENSIONAL PARTICLE-IN-CELL SIMULATIONS OF OBLIQUE PULSARS

    SciTech Connect

    Philippov, Alexander A.; Spitkovsky, Anatoly; Cerutti, Benoit

    2015-03-01

    We present “first-principles” relativistic particle-in-cell simulations of the oblique pulsar magnetosphere with pair formation. The magnetosphere starts to form with particles extracted from the surface of the neutron star. These particles are accelerated by surface electric fields and emit photons capable of producing electron–positron pairs. We inject secondary pairs at the locations of primary energetic particles whose energy exceeds the threshold for pair formation. We find solutions that are close to the ideal force-free magnetosphere with the Y-point and current sheet. Solutions with obliquities ≤40° do not show pair production in the open field line region because the local current density along the magnetic field is below the Goldreich–Julian value. The bulk outflow in these solutions is charge-separated, and pair formation happens in the current sheet and return current layer only. Solutions with higher inclinations show pair production in the open field line region, with high multiplicity of the bulk flow and the size of the pair-producing region increasing with inclination. We observe the spin-down of the star to be comparable to MHD model predictions. The magnetic dissipation in the current sheet ranges between 20% for the aligned rotator and 3% for the orthogonal rotator. Our results suggest that for low obliquity neutron stars with suppressed pair formation at the light cylinder, the presence of phenomena related to pair activity in the bulk of the polar region, e.g., radio emission, may crucially depend on the physics beyond our simplified model, such as the effects of curved spacetime or multipolar surface fields.

  4. Gyrokinetic particle-in-cell simulations of Alfvén eigenmodes in presence of continuum effects

    SciTech Connect

    Mishchenko, Alexey Könies, Axel; Hatzky, Roman

    2014-05-15

    First-principle gyrokinetic particle-in-cell simulations of a global Toroidal Alfvén Eigenmode (TAE) are undertaken in the presence of a strong coupling with the continuum. Effects of the bulk plasma temperature on the interplay between the TAE and Kinetic Alfvén Waves (KAWs) are investigated. A global TAE-KAW structure is identified which appears to be more unstable with respect to the fast ions than a simple (fluid-like) TAE mode.

  5. Lorentz boosted frame simulation technique in Particle-in-cell methods

    NASA Astrophysics Data System (ADS)

    Yu, Peicheng

    In this dissertation, we systematically explore the use of a simulation method for modeling laser wakefield acceleration (LWFA) using the particle-in-cell (PIC) method, called the Lorentz boosted frame technique. In the lab frame the plasma length is typically four orders of magnitude larger than the laser pulse length. Using this technique, simulations are performed in a Lorentz boosted frame in which the plasma length, which is Lorentz contracted, and the laser length, which is Lorentz expanded, are now comparable. This technique has the potential to reduce the computational needs of a LWFA simulation by more than four orders of magnitude, and is useful if there is no or negligible reflection of the laser in the lab frame. To realize the potential of Lorentz boosted frame simulations for LWFA, the first obstacle to overcome is a robust and violent numerical instability, called the Numerical Cerenkov Instability (NCI), that leads to unphysical energy exchange between relativistically drifting particles and their radiation. This leads to unphysical noise that dwarfs the real physical processes. In this dissertation, we first present a theoretical analysis of this instability, and show that the NCI comes from the unphysical coupling of the electromagnetic (EM) modes and Langmuir modes (both main and aliasing) of the relativistically drifting plasma. We then discuss the methods to eliminate them. However, the use of FFTs can lead to parallel scalability issues when there are many more cells along the drifting direction than in the transverse direction(s). We then describe an algorithm that has the potential to address this issue by using a higher order finite difference operator for the derivative in the plasma drifting direction, while using the standard second order operators in the transverse direction(s). The NCI for this algorithm is analyzed, and it is shown that the NCI can be eliminated using the same strategies that were used for the hybrid FFT

  6. Particle-in-cell simulations of the critical ionization velocity effect in finite size clouds

    NASA Technical Reports Server (NTRS)

    Moghaddam-Taaheri, E.; Lu, G.; Goertz, C. K.; Nishikawa, K. - I.

    1994-01-01

    The critical ionization velocity (CIV) mechanism in a finite size cloud is studied with a series of electrostatic particle-in-cell simulations. It is observed that an initial seed ionization, produced by non-CIV mechanisms, generates a cross-field ion beam which excites a modified beam-plasma instability (MBPI) with frequency in the range of the lower hybrid frequency. The excited waves accelerate electrons along the magnetic field up to the ion drift energy that exceeds the ionization energy of the neutral atoms. The heated electrons in turn enhance the ion beam by electron-neutral impact ionization, which establishes a positive feedback loop in maintaining the CIV process. It is also found that the efficiency of the CIV mechanism depends on the finite size of the gas cloud in the following ways: (1) Along the ambient magnetic field the finite size of the cloud, L (sub parallel), restricts the growth of the fastest growing mode, with a wavelength lambda (sub m parallel), of the MBPI. The parallel electron heating at wave saturation scales approximately as (L (sub parallel)/lambda (sub m parallel)) (exp 1/2); (2) Momentum coupling between the cloud and the ambient plasma via the Alfven waves occurs as a result of the finite size of the cloud in the direction perpendicular to both the ambient magnetic field and the neutral drift. This reduces exponentially with time the relative drift between the ambient plasma and the neutrals. The timescale is inversely proportional to the Alfven velocity. (3) The transvers e charge separation field across the cloud was found to result in the modulation of the beam velocity which reduces the parallel heating of electrons and increases the transverse acceleration of electrons. (4) Some energetic electrons are lost from the cloud along the magnetic field at a rate characterized by the acoustic velocity, instead of the electron thermal velocity. The loss of energetic electrons from the cloud seems to be larger in the direction of

  7. The scaling of relativistic double-year widths - Poisson-Vlasov solutions and particle-in-cell simulations

    NASA Technical Reports Server (NTRS)

    Sulkanen, Martin E.; Borovsky, Joseph E.

    1992-01-01

    The study of relativistic plasma double layers is described through the solution of the one-dimensional, unmagnetized, steady-state Poisson-Vlasov equations and by means of one-dimensional, unmagnetized, particle-in-cell simulations. The thickness vs potential-drop scaling law is extended to relativistic potential drops and relativistic plasma temperatures. The transition in the scaling law for 'strong' double layers suggested by analytical two-beam models by Carlqvist (1982) is confirmed, and causality problems of standard double-layer simulation techniques applied to relativistic plasma systems are discussed.

  8. Benchmarking Particle-in-Cell drift wave simulations with Eulerian simulations in a flux-tube

    NASA Astrophysics Data System (ADS)

    Chen, Yang; Parker, Scott; Wan, Weigang; Bravenec, Ronald; Wang, Eric; Candy, Jeff

    2012-10-01

    We present the implementation of a flux-tube option in the global turbulence code GEM.footnotetextY. Chen and S. E. Parker, J. Comp. Phys. 220, 839 (2007) This is necessary for benchmarking purposes because of the immense complexity involved in comparing global simulations. The global GEM assumes the magnetic equilibrium to be completely given. Our initial flux-tube implementation simply selects a radial location as the center of the flux-tube and a radial size of the flux-tube, sets all equilibrium quantities (B, ∇B, T, ∇T, the Jacobian etc.) to be equal to their values at the center of the flux-tube, and retains only a linear radial profile of the safety factor needed for boundary conditions. We found good agreement between GEM and GYRO/GS2 for the mode frequency/growth rate in the case of adiabatic electrons, but a difference of ˜15% in the growth rates when kinetic electrons are included. Our goal is to understand the origin of this moderate disagreement. An alternative local geometry model based on a local solution of the Grad-Shafranov equationfootnotetextJ. Candy, Plasma Phys. Control. Fusion 51, 105009 (2009) has been implemented and new benchmarking results from this model will be presented.

  9. A particle-in-cell method for the simulation of plasmas based on an unconditionally stable field solver

    NASA Astrophysics Data System (ADS)

    Wolf, Eric M.; Causley, Matthew; Christlieb, Andrew; Bettencourt, Matthew

    2016-12-01

    We propose a new particle-in-cell (PIC) method for the simulation of plasmas based on a recently developed, unconditionally stable solver for the wave equation. This method is not subject to a CFL restriction, limiting the ratio of the time step size to the spatial step size, typical of explicit methods, while maintaining computational cost and code complexity comparable to such explicit schemes. We describe the implementation in one and two dimensions for both electrostatic and electromagnetic cases, and present the results of several standard test problems, showing good agreement with theory with time step sizes much larger than allowed by typical CFL restrictions.

  10. Study of strong enhancement of synchrotron radiation via surface plasma waves excitation by particle-in-cell simulations

    SciTech Connect

    Pan, K. Q.; Zheng, C. Y. Cao, L. H.; He, X. T.; Wu, Dong; Liu, Z. J.

    2015-11-02

    Synchrotron radiation is strongly enhanced by the resonant excitation of surface plasma waves (SPWs). Two-dimensional particle-in-cell simulations show that energy conversion efficiency from laser to radiation in the case of SPWs excitation is about 18.7%, which is improved by more than 2 orders of magnitude compared with that of no SPWs excitation. Besides the high energy conversion efficiency, the frequency spectrum and the angular distribution of the radiation are also improved in the case of SPWs excitation because of the quasi-static magnet field induced by surface plasma waves excitation.

  11. A particle-in-cell method for the simulation of plasmas based on an unconditionally stable field solver

    SciTech Connect

    Wolf, Eric M.; Causley, Matthew; Christlieb, Andrew; Bettencourt, Matthew

    2016-08-09

    Here, we propose a new particle-in-cell (PIC) method for the simulation of plasmas based on a recently developed, unconditionally stable solver for the wave equation. This method is not subject to a CFL restriction, limiting the ratio of the time step size to the spatial step size, typical of explicit methods, while maintaining computational cost and code complexity comparable to such explicit schemes. We describe the implementation in one and two dimensions for both electrostatic and electromagnetic cases, and present the results of several standard test problems, showing good agreement with theory with time step sizes much larger than allowed by typical CFL restrictions.

  12. Output power fluctuations due to different weights of macro particles used in particle-in-cell simulations of Cerenkov devices

    NASA Astrophysics Data System (ADS)

    Bao, Rong; Wang, Hongguang; Li, Yongdong; Liu, Chunliang

    2016-07-01

    The output power fluctuations caused by weights of macro particles used in particle-in-cell (PIC) simulations of a backward wave oscillator and a travelling wave tube are statistically analyzed. It is found that the velocities of electrons passed a specific slow-wave structure form a specific electron velocity distribution. The electron velocity distribution obtained in PIC simulation with a relative small weight of macro particles is considered as an initial distribution. By analyzing this initial distribution with a statistical method, the estimations of the output power fluctuations caused by different weights of macro particles are obtained. The statistical method is verified by comparing the estimations with the simulation results. The fluctuations become stronger with increasing weight of macro particles, which can also be determined reversely from estimations of the output power fluctuations. With the weights of macro particles optimized by the statistical method, the output power fluctuations in PIC simulations are relatively small and acceptable.

  13. Influence of the parallel nonlinearity on zonal flows and heat transport in global gyrokinetic particle-in-cell simulations

    NASA Astrophysics Data System (ADS)

    Jolliet, S.; McMillan, B. F.; Vernay, T.; Villard, L.; Hatzky, R.; Bottino, A.; Angelino, P.

    2009-07-01

    In this paper, the influence of the parallel nonlinearity on zonal flows and heat transport in global particle-in-cell ion-temperature-gradient simulations is studied. Although this term is in theory orders of magnitude smaller than the others, several authors [L. Villard, P. Angelino, A. Bottino et al., Plasma Phys. Contr. Fusion 46, B51 (2004); L. Villard, S. J. Allfrey, A. Bottino et al., Nucl. Fusion 44, 172 (2004); J. C. Kniep, J. N. G. Leboeuf, and V. C. Decyck, Comput. Phys. Commun. 164, 98 (2004); J. Candy, R. E. Waltz, S. E. Parker et al., Phys. Plasmas 13, 074501 (2006)] found different results on its role. The study is performed using the global gyrokinetic particle-in-cell codes TORB (theta-pinch) [R. Hatzky, T. M. Tran, A. Könies et al., Phys. Plasmas 9, 898 (2002)] and ORB5 (tokamak geometry) [S. Jolliet, A. Bottino, P. Angelino et al., Comput. Phys. Commun. 177, 409 (2007)]. In particular, it is demonstrated that the parallel nonlinearity, while important for energy conservation, affects the zonal electric field only if the simulation is noise dominated. When a proper convergence is reached, the influence of parallel nonlinearity on the zonal electric field, if any, is shown to be small for both the cases of decaying and driven turbulence.

  14. Numerical simulation of quantum systems using the Particle-In-Cell method

    NASA Astrophysics Data System (ADS)

    Dirkmann, Sven; Youssef, Ziad; Hemke, Torben; Mussenbrock, Thomas

    2014-10-01

    The Particle-In-Cell (PIC) method is a very powerful method for studying the dynamics of plasmas. It has been primarily developed for tracking the charged particle trajectories subject to selfconsistent and external electromagnetic fields. Exploiting the power of modern computers, one is able to track the classical paths of tens of millions of particles at the same time. In the late 1980th, it was Dawson (and later Dauger) who had the idea to apply the PIC method to the classical part in the semiclassical approach to quantum systems via path integral methods. One could estimate that if a thousands of classical paths are sufficient to describe the dynamics of one quantum particle, then millions classical paths could describe the dynamics of a quantum particle system. A PIC code in the frame of a semiclassical approach would therefore enable the investigation of a number of quantum phenomena, e.g., optical properties, electrical properties, and, ultimately, chemical reactions. In this contribution we explain the use of the PIC code yapic (developed by the authors) in the frame of the path integral method and discuss the numerical results for simple quantum phenomena, i.e., the quantum harmonic oscillator and quantum tunneling. This work is supported by the German Research Foundation in the frame of FOR 2093.

  15. Particle-in-cell δf gyrokinetic simulations of the microtearing mode

    SciTech Connect

    Chowdhury, J.; Chen, Yang; Wan, Weigang; Parker, Scott E.; Guttenfelder, W.; Canik, J. M.

    2016-01-15

    The linear stability properties of the microtearing mode are investigated in the edge and core regimes of the National Spherical Torus Experiment (NSTX) using the particle-in-cell method based gyrokinetic code GEM. The dependence of the mode on various equilibrium quantities in both regions is compared. While the microtearing mode in the core depends upon the electron-ion collisions, in the edge region, it is found to be weakly dependent on the collisions and exists even when the collision frequency is zero. The electrostatic potential is non-negligible in each of the cases. It plays opposite roles in the core and edge of NSTX. While the microtearing mode is partially stabilized by the electrostatic potential in the core, it has substantial destabilizing effect in the edge. In addition to the spherical tokamak, we also study the microtearing mode for parameters relevant to the core of a standard tokamak. The fundamental characteristics of the mode remain the same; however, the electrostatic potential in this case is destabilizing as opposed to the core of NSTX. The velocity dependence of the collision frequency, which is crucial for the mode to grow in slab calculations, is not required to destabilize the mode in toroidal devices.

  16. Particle-in-cell simulations of discharges with intense electron emission

    NASA Astrophysics Data System (ADS)

    Sydorenko, Dmytro

    2013-09-01

    In many plasma devices, the plasma is bounded by walls which emit electrons due to secondary electron emission or thermionic emission. At low pressures, the electron mean free path exceeds the plasma dimensions, and the emitted electrons accelerated by the intense electric field of the near-wall sheath propagate through the plasma as an electron beam. The beam dynamics in a finite length system is different from theoretical predictions for infinite or periodic plasmas. This presentation gives a summary of numerical studies of beam-plasma interaction in Hall thrusters and dc discharges carried out with a particle-in-cell code. The code resolves one spatial coordinate and three velocity components, it is based on the direct implicit algorithm, the electron-to-ion mass ratio is realistic, numerous collisions between electrons and neutrals and the Coulomb collisions are included, code performance is enhanced with the help of MPI parallelization. The following effects are discussed: vanishing of the two-stream instability due to modification of the bulk electron velocity distribution, sheath instability in Hall thrusters, intermittency and multiple regimes of the two-stream instability in dc discharges. In collaboration with I. D. Kaganovich, Y. Raitses, A. V. Khrabrov (Princeton Plasma Physics Laboratory, Princeton, NJ), P. L. G. Ventzek, L. Chen (Tokyo Electron America, Austin, TX), A. Smolyakov (University of Saskatchewan, Saskatoon, SK, Canada).

  17. Propagation of localized structures in relativistic magnetized electron-positron plasmas using particle-in-cell simulations

    SciTech Connect

    López, Rodrigo A.; Muñoz, Víctor; Viñas, Adolfo F.; Valdivia, Juan A.

    2015-09-15

    We use a particle-in-cell simulation to study the propagation of localized structures in a magnetized electron-positron plasma with relativistic finite temperature. We use as initial condition for the simulation an envelope soliton solution of the nonlinear Schrödinger equation, derived from the relativistic two fluid equations in the strongly magnetized limit. This envelope soliton turns out not to be a stable solution for the simulation and splits in two localized structures propagating in opposite directions. However, these two localized structures exhibit a soliton-like behavior, as they keep their profile after they collide with each other due to the periodic boundary conditions. We also observe the formation of localized structures in the evolution of a spatially uniform circularly polarized Alfvén wave. In both cases, the localized structures propagate with an amplitude independent velocity.

  18. The Convergence of Particle-in-Cell Schemes for Cosmological Dark Matter Simulations

    NASA Astrophysics Data System (ADS)

    Myers, Andrew; Colella, Phillip; Van Straalen, Brian

    2016-01-01

    Particle methods are a ubiquitous tool for solving the Vlasov-Poisson equation in comoving coordinates, which is used to model the gravitational evolution of dark matter (DM) in an expanding universe. However, these methods are known to produce poor results on idealized test problems, particularly at late times, after the particle trajectories have crossed. To investigate this, we have performed a series of one- and two-dimensional “Zel’dovich pancake” calculations using the popular particle-in-cell (PIC) method. We find that PIC can indeed converge on these problems provided that the following modifications are made. The first modification is to regularize the singular initial distribution function by introducing a small but finite artificial velocity dispersion. This process is analogous to artificial viscosity in compressible gas dynamics, and, as with artificial viscosity, the amount of regularization can be tailored so that its effect outside of a well-defined region—in this case, the high-density caustics—is small. The second modification is the introduction of a particle remapping procedure that periodically reexpresses the DM distribution function using a new set of particles. We describe a remapping algorithm that is third-order accurate and adaptive in phase space. This procedure prevents the accumulation of numerical errors in integrating the particle trajectories from growing large enough to significantly degrade the solution. Once both of these changes are made, PIC converges at second order on the Zel’dovich pancake problem, even at late times, after many caustics have formed. Furthermore, the resulting scheme does not suffer from the unphysical, small-scale “clumping” phenomenon known to occur on the pancake problem when the perturbation wavevector is not aligned with one of the Cartesian coordinate axes.

  19. THE CONVERGENCE OF PARTICLE-IN-CELL SCHEMES FOR COSMOLOGICAL DARK MATTER SIMULATIONS

    SciTech Connect

    Myers, Andrew; Colella, Phillip; Van Straalen, Brian

    2016-01-10

    Particle methods are a ubiquitous tool for solving the Vlasov–Poisson equation in comoving coordinates, which is used to model the gravitational evolution of dark matter (DM) in an expanding universe. However, these methods are known to produce poor results on idealized test problems, particularly at late times, after the particle trajectories have crossed. To investigate this, we have performed a series of one- and two-dimensional “Zel’dovich pancake” calculations using the popular particle-in-cell (PIC) method. We find that PIC can indeed converge on these problems provided that the following modifications are made. The first modification is to regularize the singular initial distribution function by introducing a small but finite artificial velocity dispersion. This process is analogous to artificial viscosity in compressible gas dynamics, and, as with artificial viscosity, the amount of regularization can be tailored so that its effect outside of a well-defined region—in this case, the high-density caustics—is small. The second modification is the introduction of a particle remapping procedure that periodically reexpresses the DM distribution function using a new set of particles. We describe a remapping algorithm that is third-order accurate and adaptive in phase space. This procedure prevents the accumulation of numerical errors in integrating the particle trajectories from growing large enough to significantly degrade the solution. Once both of these changes are made, PIC converges at second order on the Zel’dovich pancake problem, even at late times, after many caustics have formed. Furthermore, the resulting scheme does not suffer from the unphysical, small-scale “clumping” phenomenon known to occur on the pancake problem when the perturbation wavevector is not aligned with one of the Cartesian coordinate axes.

  20. Variational symplectic particle-in-cell simulation of nonlinear mode conversion from extraordinary waves to Bernstein waves

    SciTech Connect

    Xiao, Jianyuan; Liu, Jian; Qin, Hong; Yu, Zhi; Xiang, Nong

    2015-09-15

    In this paper, the nonlinear mode conversion of extraordinary waves in nonuniform magnetized plasmas is studied using the variational symplectic particle-in-cell simulation. The accuracy of the nonlinear simulation is guaranteed by the long-term accuracy and conservativeness of the symplectic algorithm. The spectra of the electromagnetic wave, the evolution of the wave reflectivity, the energy deposition profile, and the parameter-dependent properties of radio-frequency waves during the nonlinear mode conversion are investigated. It is illustrated that nonlinear effects significantly modify the physics of the radio-frequency injection in magnetized plasmas. The evolutions of the radio-frequency wave reflectivity and the energy deposition are observed, as well as the self-interaction of the Bernstein waves and mode excitations. Even for waves with small magnitude, nonlinear effects can also become important after continuous wave injections, which are common in the realistic radio-frequency wave heating and current drive experiments.

  1. Dynamics of positive probes in underdense, strongly magnetized, E×B drifting plasma: Particle-in-cell simulations

    SciTech Connect

    Heinrich, Jonathon R.; Cooke, David L.

    2013-09-15

    Electron trapping, electron heating, space-charge wings, wake eddies, and current collection by a positive probe in E×B drifting plasma were studied in three-dimensional electromagnetic particle-in-cell simulations. In these simulations, electrons and ions were magnetized with respect to the probe and the plasma was underdense (ω{sub pe}<ω{sub ce}). A large drift velocity (Mach 4.5 with respect to the ion acoustic speed) between the plasma and probe was created with background electric and magnetic fields. Four distinct regions developed in the presences of the positive probe: a quasi-trapped electron region, an electron-depletion wing, an ion-rich wing, and a wake region. We report on the observations of strong electron heating mechanisms, space-charge wings, ion cyclotron charge-density eddies in the wake, electron acceleration due to a magnetic presheath, and the current-voltage relationship.

  2. TWO-DIMENSIONAL PARTICLE-IN-CELL SIMULATIONS OF THE NONRESONANT, COSMIC-RAY-DRIVEN INSTABILITY IN SUPERNOVA REMNANT SHOCKS

    SciTech Connect

    Ohira, Yutaka; Takahara, Fumio; Reville, Brian; Kirk, John G.

    2009-06-10

    In supernova remnants, the nonlinear amplification of magnetic fields upstream of collisionless shocks is essential for the acceleration of cosmic rays to the energy of the 'knee' at 10{sup 15.5} eV. A nonresonant instability driven by the cosmic ray current is thought to be responsible for this effect. We perform two-dimensional, particle-in-cell simulations of this instability. We observe an initial growth of circularly polarized nonpropagating magnetic waves as predicted in linear theory. It is demonstrated that in some cases the magnetic energy density in the growing waves can grow to at least 10 times its initial value. We find no evidence of competing modes, nor of significant modification by thermal effects. At late times, we observe saturation of the instability in the simulation, but the mechanism responsible is an artifact of the periodic boundary conditions and has no counterpart in the supernova-shock scenario.

  3. Electromagnetic 2D/3D Particle-in-Cell simulations of the solar wind interaction with lunar crustal anomalies.

    NASA Astrophysics Data System (ADS)

    Deca, Jan; Lapenta, Giovanni; Lembège, Bertrand; Divin, Andrey; Markidis, Stefano; Amaya, Jorge

    2013-04-01

    We present the first 2D/3D fully kinetic Particle-in-Cell simulations of the solar wind interaction with lunar crustal magnetic anomalies. The simulations are performed using the implicit electromagnetic Particle-in-Cell code iPIC3D [Markidis, Lapenta & Rizwan-uddin, 2010]. Multiscale physics is resolved for all plasma components (heavy ions, protons and electrons) in the code, recently updated with a set of open boundary conditions designed for solar wind-body interactions. We use a dipole to model the crustal anomaly. The dipole center is located outside the computational domain and the boundary representing the lunar surface is modeled as a particle-absorbing plane. Photo-emission from the lunar surface is at this point not included, but will be in future work. We study the behaviour of the dipole model with variable surface magnetic field strength under changing solar wind conditions and confirm that lunar crustal magnetic fields may indeed be strong enough to stand off the solar wind and form a mini-magnetosphere, as suggested by MHD simulations [Harnett & Winglee, 2000, 2002, 2003] and spacecraft observations [Kurata et al., 2005; Halekas et al., 2008; Wieser et al., 2010]. 3D-PIC simulations reveal to be very helpful to analyze the diversion/braking of the particle flux and the characteristics of the resulting particles accumulation. The particle flux to the surface is significantly reduced at the magnetic anomaly, surrounded by a region of enhanced density due to the magnetic mirror effect. Finally we will present preliminary results on the interaction of the solar wind with weaker magnetic anomalies in which highly non-adiabatic interactions are expected.

  4. Particle-In-Cell (PIC) code simulation results and comparison with theory scaling laws for photoelectron-generated radiation

    SciTech Connect

    Dipp, T.M. |

    1993-12-01

    The generation of radiation via photoelectrons induced off of a conducting surface was explored using Particle-In-Cell (PIC) code computer simulations. Using the MAGIC PIC code, the simulations were performed in one dimension to handle the diverse scale lengths of the particles and fields in the problem. The simulations involved monoenergetic, nonrelativistic photoelectrons emitted normal to the illuminated conducting surface. A sinusoidal, 100% modulated, 6.3263 ns pulse train, as well as unmodulated emission, were used to explore the behavior of the particles, fields, and generated radiation. A special postprocessor was written to convert the PIC code simulated electron sheath into far-field radiation parameters by means of rigorous retarded time calculations. The results of the small-spot PIC simulations were used to generate various graphs showing resonance and nonresonance radiation quantities such as radiated lobe patterns, frequency, and power. A database of PIC simulation results was created and, using a nonlinear curve-fitting program, compared with theoretical scaling laws. Overall, the small-spot behavior predicted by the theoretical scaling laws was generally observed in the PIC simulation data, providing confidence in both the theoretical scaling laws and the PIC simulations.

  5. 2D Particle-In-Cell simulations of the electron-cyclotron instability and associated anomalous transport in Hall-Effect Thrusters

    NASA Astrophysics Data System (ADS)

    Croes, Vivien; Lafleur, Trevor; Bonaventura, Zdenek; Péchereau, François; Bourdon, Anne; Chabert, Pascal

    2016-09-01

    This work studies the electron-cyclotron instability in Hall-Effect Thrusters (HETs) using a 2D Particle-In-Cell (PIC) simulation. The simulation is configured with a Cartesian coordinate system where a magnetic field, B0, is aligned along the X-axis (radial direction, including absorbing walls), a constant electric field, E0, along the Z-axis (axial direction, perpendicular to simulation plane), and the E0xB0 direction along the Y-axis (O direction, with periodic boundaries). Although for low plasma densities classical electron-neutral collisions theory describes well electron transport, at sufficiently high densities (as measured in HETs) a strong instability can be observed that enhances the electron mobility, even in the absence of collisions. The instability generates high frequency ( MHz) and short wavelength ( mm) fluctuations in both the electric field and charged particle densities. We investigate the correlation between these fluctuations and their role with anomalous electron transport; complementing previous 1D simulations. Plasma is self-consistently heated by the instability, but since the latter does not reach saturation in an infinitely long 2D system, saturation is achieved through implementation of a finite axial length that models convection in E0 direction. With support of Safran Aircraft Engines.

  6. Mesh refinement for particle-in-cell plasma simulations: Applications to - and benefits for - heavy ion fusion

    SciTech Connect

    Vay, J.L.; Colella, P.; McCorquodale, P.; Van Straalen, B.; Friedman, A.; Grote, D.P.

    2002-05-24

    The numerical simulation of the driving beams in a heavy ion fusion power plant is a challenging task, and simulation of the power plant as a whole, or even of the driver, is not yet possible. Despite the rapid progress in computer power, past and anticipated, one must consider the use of the most advanced numerical techniques, if they are to reach the goal expeditiously. One of the difficulties of these simulations resides in the disparity of scales, in time and in space, which must be resolved. When these disparities are in distinctive zones of the simulation region, a method which has proven to be effective in other areas (e.g., fluid dynamics simulations) is the mesh refinement technique. They discuss the challenges posed by the implementation of this technique into plasma simulations (due to the presence of particles and electromagnetic waves). They present the prospects for and projected benefits of its application to heavy ion fusion, in particular to the simulation of the ion source and the final beam propagation in the chamber. A Collaboration project is under way at LBNL between the Applied Numerical Algorithms Group (ANAG) and the HIF group to couple the Adaptive Mesh Refinement (AMR) library CHOMBO developed by the ANAG group to the Particle-In-Cell accelerator code (WARP) developed by the HIF-VNL. They describe their progress and present their initial findings.

  7. First principles simulation of laser-induced periodic surface structure using the particle-in-cell method

    NASA Astrophysics Data System (ADS)

    Mitchell, Robert A.; Schumacher, Douglass W.; Chowdhury, Enam A.

    2015-11-01

    We present our results of a fundamental simulation of a periodic grating structure formation on a copper target during the femtosecond-pulse laser damage process, and compare our results to recent experiment. The particle-in-cell (PIC) method is used to model the initial laser heating of the electrons, a two-temperature model (TTM) is used to model the thermalization of the material, and a modified PIC method is employed to model the atomic transport leading to a damage crater morphology consistent with experimental grating structure formation. This laser-induced periodic surface structure (LIPSS) is shown to be directly related to the formation of surface plasmon polaritons (SPP) and their interference with the incident laser pulse.

  8. Elimination of numerical Cherenkov instability in flowing-plasma particle-in-cell simulations by using Galilean coordinates.

    PubMed

    Lehe, Remi; Kirchen, Manuel; Godfrey, Brendan B; Maier, Andreas R; Vay, Jean-Luc

    2016-11-01

    Particle-in-cell (PIC) simulations of relativistic flowing plasmas are of key interest to several fields of physics (including, e.g., laser-wakefield acceleration, when viewed in a Lorentz-boosted frame) but remain sometimes infeasible due to the well-known numerical Cherenkov instability (NCI). In this article, we show that, for a plasma drifting at a uniform relativistic velocity, the NCI can be eliminated by simply integrating the PIC equations in Galilean coordinates that follow the plasma (also sometimes known as comoving coordinates) within a spectral analytical framework. The elimination of the NCI is verified empirically and confirmed by a theoretical analysis of the instability. Moreover, it is shown that this method is applicable both to Cartesian geometry and to cylindrical geometry with azimuthal Fourier decomposition.

  9. Particle-in-cell simulation of two-dimensional electron velocity shear driven instability in relativistic domain

    NASA Astrophysics Data System (ADS)

    Shukla, Chandrasekhar; Das, Amita; Patel, Kartik

    2016-08-01

    We carry out particle-in-cell simulations to study the instabilities associated with a 2-D sheared electron flow configuration against a neutralizing background of ions. Both weak and strong relativistic flow velocities are considered. In the weakly relativistic case, we observe the development of electromagnetic Kelvin-Helmholtz instability with similar characteristics as that predicted by the electron Magnetohydrodynamic (EMHD) model. On the contrary, in a strong relativistic case, the compressibility effects of electron fluid dominate and introduce upper hybrid electrostatic oscillations transverse to the flow which are very distinct from EMHD fluid behavior. In the nonlinear regime, both weak and strong relativistic cases lead to turbulence with broad power law spectrum.

  10. Multirate Particle-in-Cell Time Integration Techniques of Vlasov-Maxwell Equations for Collisionless Kinetic Plasma Simulations

    SciTech Connect

    Chen, Guangye; Chacon, Luis; Knoll, Dana Alan; Barnes, Daniel C

    2015-07-31

    A multi-rate PIC formulation was developed that employs large timesteps for slow field evolution, and small (adaptive) timesteps for particle orbit integrations. Implementation is based on a JFNK solver with nonlinear elimination and moment preconditioning. The approach is free of numerical instabilities (ωpeΔt >>1, and Δx >> λD), and requires many fewer dofs (vs. explicit PIC) for comparable accuracy in challenging problems. Significant gains (vs. conventional explicit PIC) may be possible for large scale simulations. The paper is organized as follows: Vlasov-Maxwell Particle-in-cell (PIC) methods for plasmas; Explicit, semi-implicit, and implicit time integrations; Implicit PIC formulation (Jacobian-Free Newton-Krylov (JFNK) with nonlinear elimination allows different treatments of disparate scales, discrete conservation properties (energy, charge, canonical momentum, etc.)); Some numerical examples; and Summary.

  11. Elimination of numerical Cherenkov instability in flowing-plasma particle-in-cell simulations by using Galilean coordinates

    NASA Astrophysics Data System (ADS)

    Lehe, Remi; Kirchen, Manuel; Godfrey, Brendan B.; Maier, Andreas R.; Vay, Jean-Luc

    2016-11-01

    Particle-in-cell (PIC) simulations of relativistic flowing plasmas are of key interest to several fields of physics (including, e.g., laser-wakefield acceleration, when viewed in a Lorentz-boosted frame) but remain sometimes infeasible due to the well-known numerical Cherenkov instability (NCI). In this article, we show that, for a plasma drifting at a uniform relativistic velocity, the NCI can be eliminated by simply integrating the PIC equations in Galilean coordinates that follow the plasma (also sometimes known as comoving coordinates) within a spectral analytical framework. The elimination of the NCI is verified empirically and confirmed by a theoretical analysis of the instability. Moreover, it is shown that this method is applicable both to Cartesian geometry and to cylindrical geometry with azimuthal Fourier decomposition.

  12. Particle-in-cell simulations of sheath formation around biased interconnectors in a low-earth-orbit plasma

    NASA Technical Reports Server (NTRS)

    Thiemann, H.; Schunk, R. W.

    1990-01-01

    The interaction between satellite solar arrays and the LEO plasma is presently studied with particle-in-cell simulations in which an electrical potential was suddenly applied to the solar cell interconnector. The consequent temporal response was followed for the real O(+)-electron mass ratio in the cases of 100- and 250-V solar cells, various solar cell thicknesses, and solar cells with secondary electron emission. Larger applied potentials and thinner solar cells lead to greater initial polarization surface charges, and therefore longer discharging and shielding times. When secondary electron emission from the cover glass is brought to bear, however, the potential structure is nearly planar, allowing constant interaction between plasma electrons and cover glass; a large fraction of the resulting secondary electrons is collected by the interconnector, constituting an order-of-magnitude increase in collected current.

  13. A particle-in-cell method for the simulation of plasmas based on an unconditionally stable field solver

    DOE PAGES

    Wolf, Eric M.; Causley, Matthew; Christlieb, Andrew; ...

    2016-08-09

    Here, we propose a new particle-in-cell (PIC) method for the simulation of plasmas based on a recently developed, unconditionally stable solver for the wave equation. This method is not subject to a CFL restriction, limiting the ratio of the time step size to the spatial step size, typical of explicit methods, while maintaining computational cost and code complexity comparable to such explicit schemes. We describe the implementation in one and two dimensions for both electrostatic and electromagnetic cases, and present the results of several standard test problems, showing good agreement with theory with time step sizes much larger than allowedmore » by typical CFL restrictions.« less

  14. Particle-in-cell simulations of collisionless shock formation via head-on merging of two laboratory supersonic plasma jets

    SciTech Connect

    Thoma, C.; Welch, D. R.; Hsu, S. C.

    2013-08-15

    We describe numerical simulations, using the particle-in-cell (PIC) and hybrid-PIC code lsp[T. P. Hughes et al., Phys. Rev. ST Accel. Beams 2, 110401 (1999)], of the head-on merging of two laboratory supersonic plasma jets. The goals of these experiments are to form and study astrophysically relevant collisionless shocks in the laboratory. Using the plasma jet initial conditions (density ∼10{sup 14}–10{sup 16} cm{sup −3}, temperature ∼ few eV, and propagation speed ∼20–150 km/s), large-scale simulations of jet propagation demonstrate that interactions between the two jets are essentially collisionless at the merge region. In highly resolved one- and two-dimensional simulations, we show that collisionless shocks are generated by the merging jets when immersed in applied magnetic fields (B∼0.1–1 T). At expected plasma jet speeds of up to 150 km/s, our simulations do not give rise to unmagnetized collisionless shocks, which require much higher velocities. The orientation of the magnetic field and the axial and transverse density gradients of the jets have a strong effect on the nature of the interaction. We compare some of our simulation results with those of previously published PIC simulation studies of collisionless shock formation.

  15. Particle-in-cell simulations of Magnetic Field Generation, Evolution, and Reconnection in Laser-driven Plasmas

    NASA Astrophysics Data System (ADS)

    Matteucci, Jack; Moissard, Clément; Fox, Will; Bhattacharjee, Amitava

    2016-10-01

    The advent of high-energy-density physics facilities has introduced the opportunity to experimentally investigate magnetic field dynamics relevant to both ICF and astrophysical plasmas. Recent experiments have demonstrated magnetic reconnection between colliding plasma plumes, where the reconnecting magnetic fields were self-generated in the plasma by the Biermann battery effect. In this study, we simulate these experiments from first principles using 2-D and 3-D particle-in-cell simulations. Simulations self-consistently demonstrate magnetic field generation by the Biermann battery effect, followed by advection by the Hall effect and ion flow. In 2-D simulations, we find in both the collisionless case and the semi-collisional case, defined by eVi × B >> Rei /ne (where Rei is the electron ion momentum transfer) that quantitative agreement with the generalized Ohm's law is only obtained with the inclusion of the pressure tensor. Finally, we document that significant field is destroyed at the reconnection site by the Biermann term, an inverse, `anti-Biermann' effect, which has not been considered previously in analysis of the experiment. The role of the anti-Biermann effect will be compared to standard reconnection mechanisms in 3-D reconnection simulations. This research used resources of the ORLC Facility at the Oak Ridge National Laboratory, which is supported by the Office of Science of the U.S. DoE under Contract No. DE-AC05-00OR22725.

  16. The Multi Level Multi Domain (MLMD) method: a semi-implicit adaptive algorithm for Particle In Cell plasma simulations

    NASA Astrophysics Data System (ADS)

    Innocenti, Maria Elena; Beck, Arnaud; Markidis, Stefano; Lapenta, Giovanni

    2013-10-01

    Particle in Cell (PIC) simulations of plasmas are not bound anymore by the stability constraints of explicit algorithms. Semi implicit and fully implicit methods allow to use larger grid spacings and time steps. Adaptive Mesh Refinement (AMR) techniques permit to locally change the simulation resolution. The code proposed in Innocenti et al., 2013 and Beck et al., 2013 is however the first to combine the advantages of both. The use of the Implicit Moment Method allows to taylor the resolution used in each level to the physical scales of interest and to use high Refinement Factors (RF) between the levels. The Multi Level Multi Domain (MLMD) structure, where all levels are simulated as complete domains, conjugates algorithmic and practical advantages. The different levels evolve according to the local dynamics and achieve optimal level interlocking. Also, the capabilities of the Object Oriented programming model are fully exploited. The MLMD algorithm is demonstrated with magnetic reconnection and collisionless shocks simulations with very high RFs between the levels. Notable computational gains are achieved with respect to simulations performed on the entire domain with the higher resolution. Beck A. et al. (2013). submitted. Innocenti M. E. et al. (2013). JCP, 238(0):115-140.

  17. Nonlinear evolution of ion acoustic solitary waves in space plasmas: Fluid and particle-in-cell simulations

    NASA Astrophysics Data System (ADS)

    Kakad, Bharati; Kakad, Amar; Omura, Yoshiharu

    2014-07-01

    Spacecraft observations revealed the presence of electrostatic solitary waves (ESWs) in various regions of the Earth's magnetosphere. Over the years, many researchers have attempted to model these observations in terms of electron/ion acoustic solitary waves by using nonlinear fluid theory/simulations. The ESW structures predicted by fluid models can be inadequate due to its inability in handling kinetic effects. To provide clear view on the application of the fluid and kinetic treatments in modeling the ESWs, we perform both fluid and particle-in-cell (PIC) simulations of ion acoustic solitary waves (IASWs) and estimate the quantitative differences in their characteristics like speed, amplitude, and width. We find that the number of trapped electrons in the wave potential is higher for the IASW, which are generated by large-amplitude initial density perturbation (IDP). The present fluid and PIC simulation results are in close agreement for small amplitude IDPs, whereas for large IDPs they show discrepancy in the amplitude, width, and speed of the IASW, which is attributed to negligence of kinetic effects in the former approach. The speed of IASW in the fluid simulations increases with the increase of IASW amplitude, while the reverse tendency is seen in the PIC simulation. The present study suggests that the fluid treatment is appropriate when the magnitude of phase velocity of IASW is less than the ion acoustic (IA) speed obtained from their linear dispersion relation, whereas when it exceeds IA speed, it is necessary to include the kinetic effects in the model.

  18. Delta-f to Full-F Particle-In-Cell Simulation of Microturbulence in Tokamaks

    NASA Astrophysics Data System (ADS)

    Lee, W. W.; Ethier, S.; Ganesh, J.

    2012-10-01

    The use of a generalized weight-based particle simulation scheme suitable for simulating tokamak turbulence is reported. The scheme, which is a generalization of the perturbed distribution schemes developed earlier for PIC simulations, is now capable of handling the full distribution of the particles in the simulation. Specifically, we can simulate both the delta-f and the full-F particles within the same code. Its development [1] is based on the concept of multiscale expansion, which separates the scale lengths of the background inhomogeneity from those associated with the perturbed distributions, and on the fact that the intrinsic particle noise level is troublesome only in the beginning of the simulation, where the signal to noise ratio is low. But, when the signal to noise ratio becomes higher afterwards, we can gradually turn on the the full-F particles without interfering with the ensuing fluctuations. We will report on the simulation studies using GTC [2] for the ion temperature gradient (ITG) driven instabilities in the presence of zonal flows. The physics of steady state transport in tokamaks will be discussed.[4pt] [1] W. W. Lee, T. G. Jenkins and S. Ethier, Comp. Phys. Comm. 182, 564 (2011).[0pt] [2] Z. Lin, T. S. Hahm, W. W. Lee, W. M. Tang, R. White Science 281, 1835 (1998).

  19. Effects of variations in electron thermal velocity on the whistler anisotropy instability: Particle-in-cell simulations

    NASA Astrophysics Data System (ADS)

    Hughes, R. Scott; Wang, Joseph; Decyk, Viktor K.; Gary, S. Peter

    2016-04-01

    This paper investigates how the physics of the whistler anisotropy instability (WAI) is affected by variations in the electron thermal velocity vte, referred to here in terms of the ratio v̂ t e=vt e/c , where c is the speed of light. The WAI is driven by the electron condition RT>1 , where RT=Te ⊥/Te ∥ is the temperature anisotropy ratio and ⊥/∥ signify directions perpendicular/parallel to the background magnetic field B0 . While a typical value of v̂ t e in the solar wind is ˜0.005 , electromagnetic (EM) particle-in-cell (PIC) simulations often use a value near 0.1 in order to maximize the computational time step. In this study, a two-dimensional (2D) Darwin particle-in-cell (DPIC) code, MDPIC2, is used. The time step in the DPIC model is not affected by the choice of v̂ t e , making DPIC suited for this study. A series of simulations are carried out under the condition that the electron βe is held fixed, while v̂ t e is varied over the range 0.1 ≥v̂ t e≥0.025 . The results show that, with βe held fixed, the linear dispersion properties and the nonlinear saturation amplitude and pitch angle scattering rates associated with the WAI are insensitive to the value of v̂ t e . A supplementary investigation is conducted which characterizes how the WAI model is affected at various values of v̂ t e by noise associated with the limited number of particles in a typical PIC simulation. It is found that the evolution of the WAI is more strongly influenced by electrostatic noise as v̂ t e is decreased. The electrostatic noise level is inversely proportional to the number of particles per computational cell ( Nc ); this implies that the number of particles required to remove nonphysical effects from the PIC simulation increases as v̂ t e decreases. It is concluded that PIC simulations of this instability which use an artificially large value of v̂ t e accurately reproduce the response of a cooler plasma as long as a realistic value of βe is used

  20. Comparison of particle-in-cell simulation with experiment for thetransport system of the superconducting electron cyclotron resonance ionsource VENUS

    SciTech Connect

    Todd, DamonS.; Leitner, Daniela; Leitner, Matthaeus; Lyneis,Claude M.; Qiang, Ji; Grote, Dave P.

    2005-09-19

    The three-dimensional, particle-in-cell code WARP has been enhanced to allow end-to-end beam dynamics simulations of the VENUS beam transport system from the extraction region, through a mass-analyzing magnet, and up to a two-axis emittance scanner. This paper presents first results of comparisons between simulation and experimental data. A helium beam (He+, He2+) is chosen as an initial comparison beam due to its simple mass spectrum. Although a number of simplifications are made for the initial extracted beam, aberration characteristics appear in simulations that are also present in experimental phase space current density measurements. Further, measurements of phase space tilt indicate that simulations must have little or no space charge neutralization along the transport system to best agree with experiment. In addition, recent measurements of triangular beam structure immediately after the source are presented. This beam structure is related to the source magnetic confinement fields and will need to be taken into account as the initial beam approximations are lifted.

  1. Particle-in-cell simulation of the head-on collision between two ion acoustic solitary waves in plasmas

    SciTech Connect

    Qi, Xin; Xu, Yan-xia; Duan, Wen-shan E-mail: lyang@impcas.ac.cn; Zhang, Ling-yu; Yang, Lei E-mail: lyang@impcas.ac.cn

    2014-08-15

    The head-on collision of two ion acoustic solitary waves in plasmas composed of hot electrons and cold ions has been studied by using the Poincare-Lighthill-Kuo (PLK) perturbation method and one-dimensional Particle-in-Cell (PIC) simulation. Then the phase lags of ion acoustic solitary waves (IASWs) obtained from the two approaches have been compared and discussed. It has been found that: if the amplitudes of both the colliding IASWs are small enough, the phase lags obtained from PLK method are in good agreement with those obtained from PIC simulation. As the amplitudes of IASWs increase, the phase lags from PIC simulation become smaller than the analytical ones from PLK method. Besides, the PIC simulation shows the phase lag of an IASW involved in collision depends not only on the characteristics of the wave it collides with but also on itself, which disagrees with the prediction of the PLK method. Finally, the application scopes of the PLK method in studying both the single IASW and the head-on collisions of IASWs have been studied and discussed, and the latter turns out to be more strict.

  2. Quasi-One-Dimensional Particle-in-Cell Simulation of Magnetic Nozzles

    NASA Technical Reports Server (NTRS)

    Ebersohn, Frans H.; Sheehan, J. P.; Gallimore, Alec D.; Shebalin, John V.

    2015-01-01

    A method for the quasi-one-dimensional simulation of magnetic nozzles is presented and simulations of a magnetic nozzle are performed. The effects of the density variation due to plasma expansion and the magnetic field forces on ion acceleration are investigated. Magnetic field forces acting on the electrons are found to be responsible for the formation of potential structures which accelerate ions. The effects of the plasma density variation alone are found to only weakly affect ion acceleration. Strongly diverging magnetic fields drive more rapid potential drops.

  3. Discontinuous Galerkin particle-in-cell simulation of longitudinal plasma wave damping and comparison to the Landau approximation and the exact solution of the dispersion relation

    SciTech Connect

    Foust, F. R.; Bell, T. F.; Spasojevic, M.; Inan, U. S.

    2011-06-15

    We present results showing the measured Landau damping rate using a high-order discontinuous Galerkin particle-in-cell (DG-PIC) [G. B. Jacobs and J. S. Hesthaven, J. Comput. Phys. 214, 96 (2006)] method. We show that typical damping rates measured in particle-in-cell (PIC) simulations can differ significantly from the linearized Landau damping coefficient and propose a simple numerical method to solve the plasma dispersion function exactly for moderate to high damping rates. Simulation results show a high degree of agreement between the high-order PIC results and this calculated theoretical damping rate.

  4. Global particle in cell simulation of radio frequency waves in tokamak ∖fs20

    NASA Astrophysics Data System (ADS)

    Kuley, Animesh; Lin, Z.; Bao, J.; Lau, C.; Sun, G. Y.

    2016-10-01

    We are looking into a new nonlinear kinetic simulation model to study the radio frequency heating and current drive of fusion plasmas using toroidal code GTC. In this model ions are considered as fully kinetic (FK) particles using Vlasov equation and the electrons are treated as drift kinetic (DK) particles using drift kinetic equation. We have benchmarked this numerical model to verify the linear physics of normal modes, conversion of slow and fast waves and its propagation in the core region of the tokamak using the Boozer coordinates. In the nonlinear simulation of ion Bernstein wave (IBW) in a tokamak, parametric decay instability (PDI) is observed where a large amplitude pump wave decays into an IBW sideband and an ion cyclotron quasi-mode (ICQM). The ICQM induces an ion perpendicular heating, with a heating rate proportional to the pump wave intensity. Finally, in the electromagnetic LH simulation, nonlinear wave trapping of electrons is verified and plasma current is nonlinearly driven. Presently we are working on the development of new PIC simulation model using cylindrical coordinates to address the RF wave propagation from the edge of the tokamak to the core region and the parametric instabilities associated with this RF waves. We have verified the cyclotron integrator using Boris push method.

  5. One-dimensional particle-in-cell simulations of electrostatic Bernstein waves in plasmas with kappa velocity distributions

    SciTech Connect

    Abdul, R. F. Mace, R. L.

    2015-10-15

    Electrostatic Bernstein waves that propagate exactly perpendicularly to a static magnetic field in an electron-ion plasma are investigated using one-and-two-halves dimensional particle-in-cell simulations. An ion-to-electron mass ratio of m{sub i}/m{sub e} = 100 is used, allowing sufficient separation of the electron and ion time scales while still accounting for the ion dynamics without resorting to exceptionally long simulation run times. As a consequence of the mass ratio used, both the high frequency electron Bernstein wave and the lower frequency ion Bernstein wave are resolved within a single simulation run. The simulations presented here use isotropic three-dimensional kappa velocity distributions as well as the widely used Maxwellian velocity distribution, and the results from using each of these velocity distributions are analysed and compared. The behaviour of the Bernstein waves is found to be significantly dependent on the spectral index, κ, of the kappa distribution in all frequency domains of the Bernstein waves. In both the Maxwellian and kappa cases, spectral analysis of the electric field (wave) intensities, as a function of ω and k, show very good agreement between the simulation results and the linear dispersion relation for Bernstein waves. This agreement serves to validate the simulation techniques used, as well as the theory of Bernstein waves in plasmas with a kappa velocity distribution. The intensity of the field fluctuations in the simulations containing an abundance of superthermal particles, i.e., where the plasma has a kappa velocity distribution with a low kappa index, is slightly higher compared to the simulations of plasmas with higher kappa values. The plasmas with low kappa values also exhibit a broader region in frequency space of high intensity field fluctuations.

  6. Cosmological particle-in-cell simulations with ultralight axion dark matter

    NASA Astrophysics Data System (ADS)

    Veltmaat, Jan; Niemeyer, Jens C.

    2016-12-01

    We study cosmological structure formation with ultralight axion dark matter, or "fuzzy dark matter" (FDM), using a particle-mesh scheme to account for the quantum pressure arising in the Madelung formulation of the Schrödinger-Poisson equations. Subpercent-level energy conservation and correct linear behavior are demonstrated. Whereas the code gives rise to the same core-halo profiles as direct simulations of the Schrödinger equation, it does not reproduce the detailed interference patterns. In cosmological simulations with FDM initial conditions, we find a maximum relative difference of O(10%) in the power spectrum near the quantum Jeans length compared to using a standard N -body code with identical initial conditions. This shows that the effect of quantum pressure during nonlinear structure formation cannot be neglected for precision constraints on a dark matter component consisting of ultralight axions.

  7. Whistler anisotropy instabilities as the source of banded chorus: Van Allen Probes observations and particle-in-cell simulations.

    PubMed

    Fu, Xiangrong; Cowee, Misa M; Friedel, Reinhard H; Funsten, Herbert O; Gary, S Peter; Hospodarsky, George B; Kletzing, Craig; Kurth, William; Larsen, Brian A; Liu, Kaijun; MacDonald, Elizabeth A; Min, Kyungguk; Reeves, Geoffrey D; Skoug, Ruth M; Winske, Dan

    2014-10-01

    Magnetospheric banded chorus is enhanced whistler waves with frequencies ωr <Ω e , where Ω e is the electron cyclotron frequency, and a characteristic spectral gap at ωr ≃Ω e /2. This paper uses spacecraft observations and two-dimensional particle-in-cell simulations in a magnetized, homogeneous, collisionless plasma to test the hypothesis that banded chorus is due to local linear growth of two branches of the whistler anisotropy instability excited by two distinct, anisotropic electron components of significantly different temperatures. The electron densities and temperatures are derived from Helium, Oxygen, Proton, and Electron instrument measurements on the Van Allen Probes A satellite during a banded chorus event on 1 November 2012. The observations are consistent with a three-component electron model consisting of a cold (a few tens of eV) population, a warm (a few hundred eV) anisotropic population, and a hot (a few keV) anisotropic population. The simulations use plasma and field parameters as measured from the satellite during this event except for two numbers: the anisotropies of the warm and the hot electron components are enhanced over the measured values in order to obtain relatively rapid instability growth. The simulations show that the warm component drives the quasi-electrostatic upper band chorus and that the hot component drives the electromagnetic lower band chorus; the gap at ∼Ω e /2 is a natural consequence of the growth of two whistler modes with different properties.

  8. Study of self-consistent particle flows in a plasma blob with particle-in-cell simulations

    SciTech Connect

    Hasegawa, Hiroki Ishiguro, Seiji

    2015-10-15

    The self-consistent particle flows in a filamentary coherent structure along the magnetic field line in scrape-off layer (SOL) plasma (plasma blob) have been investigated by means of a three-dimensional electrostatic particle-in-cell simulation code. The presence of the spiral current system composed of the diamagnetic and parallel currents in a blob is confirmed by the particle simulation without any assumed sheath boundary models. Furthermore, the observation of the electron and ion parallel velocity distributions in a blob shows that those distributions are far from Maxwellian due to modification with the sheath formation and that the electron temperature on the higher potential side in a blob is higher than that on the lower potential side. Also, it is found that the ions on the higher potential side are accelerated more intensively along the magnetic field line than those on the lower potential side near the edge. This study indicates that particle simulations are able to provide an exact current closure to analysis of blob dynamics and will bring more accurate prediction of plasma transport in the SOL without any empirical assumptions.

  9. Efficient particle-in-cell simulation of auroral plasma phenomena using a CUDA enabled graphics processing unit

    NASA Astrophysics Data System (ADS)

    Sewell, Stephen

    This thesis introduces a software framework that effectively utilizes low-cost commercially available Graphic Processing Units (GPUs) to simulate complex scientific plasma phenomena that are modeled using the Particle-In-Cell (PIC) paradigm. The software framework that was developed conforms to the Compute Unified Device Architecture (CUDA), a standard for general purpose graphic processing that was introduced by NVIDIA Corporation. This framework has been verified for correctness and applied to advance the state of understanding of the electromagnetic aspects of the development of the Aurora Borealis and Aurora Australis. For each phase of the PIC methodology, this research has identified one or more methods to exploit the problem's natural parallelism and effectively map it for execution on the graphic processing unit and its host processor. The sources of overhead that can reduce the effectiveness of parallelization for each of these methods have also been identified. One of the novel aspects of this research was the utilization of particle sorting during the grid interpolation phase. The final representation resulted in simulations that executed about 38 times faster than simulations that were run on a single-core general-purpose processing system. The scalability of this framework to larger problem sizes and future generation systems has also been investigated.

  10. A Particle-in-Cell Simulation for the Traveling Wave Direct Energy Converter (TWDEC) for Fusion Propulsion

    NASA Technical Reports Server (NTRS)

    Chap, Andrew; Tarditi, Alfonso G.; Scott, John H.

    2013-01-01

    A Particle-in-cell simulation model has been developed to study the physics of the Traveling Wave Direct Energy Converter (TWDEC) applied to the conversion of charged fusion products into electricity. In this model the availability of a beam of collimated fusion products is assumed; the simulation is focused on the conversion of the beam kinetic energy into alternating current (AC) electric power. The model is electrostatic, as the electro-dynamics of the relatively slow ions can be treated in the quasistatic approximation. A two-dimensional, axisymmetric (radial-axial coordinates) geometry is considered. Ion beam particles are injected on one end and travel along the axis through ring-shaped electrodes with externally applied time-varying voltages, thus modulating the beam by forming a sinusoidal pattern in the beam density. Further downstream, the modulated beam passes through another set of ring electrodes, now electrically oating. The modulated beam induces a time alternating potential di erence between adjacent electrodes. Power can be drawn from the electrodes by connecting a resistive load. As energy is dissipated in the load, a corresponding drop in beam energy is measured. The simulation encapsulates the TWDEC process by reproducing the time-dependent transfer of energy and the particle deceleration due to the electric eld phase time variations.

  11. Two-dimensional particle-in-cell simulations of plasma cavitation and bursty Brillouin backscattering for nonrelativistic laser intensities

    SciTech Connect

    Riconda, C.; Weber, S.; Tikhonchuk, V. T.; Adam, J.-C.; Heron, A.

    2006-08-15

    Two-dimensional particle-in-cell simulations of laser-plasma interaction using a plane-wave geometry show strong bursty stimulated Brillouin backscattering, rapid filamentation, and subsequent plasma cavitation. It is shown that the cavitation is not induced by self-focusing. The electromagnetic fields below the plasma frequency that are excited are related to transient soliton-like structures. At the origin of these solitons is a three-wave decay process exciting new modes in the plasma. The cavitation is responsible for a strong local reduction of the reflectivity and goes along with an efficient but transient heating of the electrons. Once heating ceases, transmission starts to increase. Local as well as global average reflectivities attain a very low value due to strong plasma density variations brought about by the cavitation process. On the one hand, the simulations confirm the existence of a new mechanism of cavity and soliton formation in nonrelativistic laser-plasma interaction in two dimensions, which was shown to exist in one-dimensional simulations [S. Weber, C. Riconda, and V. T. Tikhonchuk, Phys. Rev. Lett. 94, 055005 (2005)]. On the other hand, new aspects are introduced inherently related to the additional degree of freedom.

  12. Whistler anisotropy instabilities as the source of banded chorus: Van Allen Probes observations and particle-in-cell simulations

    NASA Astrophysics Data System (ADS)

    Fu, Xiangrong; Cowee, Misa M.; Friedel, Reinhard H.; Funsten, Herbert O.; Gary, S. Peter; Hospodarsky, George B.; Kletzing, Craig; Kurth, William; Larsen, Brian A.; Liu, Kaijun; MacDonald, Elizabeth A.; Min, Kyungguk; Reeves, Geoffrey D.; Skoug, Ruth M.; Winske, Dan

    2014-10-01

    Magnetospheric banded chorus is enhanced whistler waves with frequencies ωr<Ωe, where Ωe is the electron cyclotron frequency, and a characteristic spectral gap at ωr≃Ωe/2. This paper uses spacecraft observations and two-dimensional particle-in-cell simulations in a magnetized, homogeneous, collisionless plasma to test the hypothesis that banded chorus is due to local linear growth of two branches of the whistler anisotropy instability excited by two distinct, anisotropic electron components of significantly different temperatures. The electron densities and temperatures are derived from Helium, Oxygen, Proton, and Electron instrument measurements on the Van Allen Probes A satellite during a banded chorus event on 1 November 2012. The observations are consistent with a three-component electron model consisting of a cold (a few tens of eV) population, a warm (a few hundred eV) anisotropic population, and a hot (a few keV) anisotropic population. The simulations use plasma and field parameters as measured from the satellite during this event except for two numbers: the anisotropies of the warm and the hot electron components are enhanced over the measured values in order to obtain relatively rapid instability growth. The simulations show that the warm component drives the quasi-electrostatic upper band chorus and that the hot component drives the electromagnetic lower band chorus; the gap at ˜Ωe/2 is a natural consequence of the growth of two whistler modes with different properties.

  13. Nonlinear Evolution of Ion Acoustic Solitary Waves in Earth's Magnetosphere: Fluid and Particle-In-Cell Simulations

    NASA Astrophysics Data System (ADS)

    Kakad, A.; Kakad, B. A.; Omura, Y.

    2014-12-01

    In recent spacecraft observations, coherent electrostatic solitary wave (ESWs) structures are observed in various regions of the Earth's magnetosphere. Over the years, many researchers have attempted to model these observations in terms of electron/ion acoustic solitary waves by using nonlinear fluid theory/simulations. The ESW structures predicted by fluid models can be inadequate due to its inability in handling kinetic effects. To provide clear view on the application of the fluid and kinetic treatments in modeling the ESWs, we perform both fluid and particle-in-cell (PIC) simulations of ion acoustic solitary waves (IASWs) and estimate the quantitative differences in their characteristics like speed, amplitude, and width. It is noted that a long time evolution of Gaussian type perturbations in the equilibrium electron and ion densities generated the nonlinear IASW structures in both fluid and PIC simulations. The IASW structures represent vortices of trapped electrons in PIC simulations. We find that the number of trapped electrons in the wave potential is higher for the large amplitude IASW, which are generated by large-amplitude initial density perturbation (IDP). The present fluid and PIC simulation results are in close agreement for small amplitude IDPs, whereas for large IDPs they show discrepancy in the amplitude, width, and speed of the IASW, which is attributed to negligence of kinetic effects in the former approach. The speed of IASW in the fluid simulations increases with the increase of IASW amplitude, while the reverse tendency is seen in the PIC simulation. The present study suggests that the fluid treatment is appropriate to model the IASW observations when the magnitude of phase velocity of IASW is less than the ion acoustic (IA) speed obtained from their linear dispersion relation, whereas when it exceeds IA speed, it is necessary to include the kinetic effects in the model.

  14. Computational Performance of Intel MIC, Sandy Bridge, and GPU Architectures: Implementation of a 1D c++/OpenMP Electrostatic Particle-In-Cell Code

    DTIC Science & Technology

    2014-05-01

    giovanni.lapenta@wis.kuleuven.be Contents 1 Introduction 1 2 Electrostatic Explicit PIC Algorithm 2 3 Overview of the Test Architectures 3 3.1 Sandy Bridge...Acknowledgments 8 References 8 1. Introduction Simulations of physical plasma systems are quite challenging because they require extensive use of computing...fusion, space and astrophysical plasmas, but still the general picture can be presented quite well with the fluid approach [6, 7]. The microscopic

  15. Relativistic Particle-In-Cell Simulation Studies of Prompt and Early Afterglows from GRBs

    NASA Technical Reports Server (NTRS)

    Nishikawa, Ken-Ichi; Hardee, Philip; Mizuno, Yosuke; Fishman, Gerald

    2008-01-01

    Nonthermal radiation observed from astrophysical systems containing relativistic jets and shocks, e.g., gamma-ray bursts (GRBs), active galactic nuclei (AGNs), and Galactic microquasar systems usually have power-law emission spectra. Recent PIC simulations of relativistic electron-ion (electro-positron) jets injected into a stationary medium show that particle acceleration occurs within the downstream jet. In the collisionless relativistic shock particle acceleration is due to plasma waves and their associated instabilities {e.g., the Weibel (filamentation) instability) created in the shocks are responsible for particle (electron, positron, and ion) acceleration. The simulation results show that the Weibel instability is responsible for generating and amplifying highly nonuniform, small-scale magnetic fields. These magnetic fields contribute to the electron's transverse deflection behind the jet head. The "jitter" radiation from deflected electrons has different properties than synchrotron radiation which is calculated in a uniform magnetic field. This jitter radiation may be important to understanding the complex time evolution and/or spectral structure in gamma-ray bursts, relativistic jets, and supernova remnants.-/

  16. New Relativistic Particle-In-Cell Simulation Studies of Prompt and Early Afterglows from GRBs

    NASA Technical Reports Server (NTRS)

    Nishikawa, Ken-ichi; Hardee, P.; Mizuno, Y.; Zhang, B.; Medvedev, M.; Hartmann, D.; Fishman, J. F.; Preece, R.

    2008-01-01

    Nonthermal radiation observed from astrophysical systems containing relativistic jets and shocks, e.g., gamma-ray bursts (GRBs), active galactic nuclei (AGNs), and Galactic microquasar systems usually have power-law emission spectra. Recent PIC simulations of relativistic electron-ion (electro-positron) jets injected into a stationary medium show that particle acceleration occurs within the downstream jet. In the collisionless relativistic shock particle acceleration is due to plasma waves and their associated instabilities (e.g., the Buneman instability, other two-streaming instability, and the Weibel (filamentation) instability) created in the shocks are responsible for particle (electron, positron, and ion) acceleration. The simulation results show that the Weibel instability is responsible for generating and amplifying highly nonuniform, small-scale magnetic fields. These magnetic fields contribute to the electron's transverse deflection behind the jet head. The 'jitter' radiation from deflected electrons has different properties than synchrotron radiation which is calculated in a uniform magnetic field. This jitter radiation may be important to understanding the complex time evolution and/or spectral structure in gamma-ray bursts, relativistic jets, and supernova remnants.

  17. Relativistic Particle-in-Cell Simulation Studies of Prompt and Early Afterglows Observed by GLAST

    NASA Technical Reports Server (NTRS)

    Mizuno, Y.; Nishikawa, K.-I.; Hardee, P.; Fishman, G. J.; Preece, R.

    2007-01-01

    Nonthermal radiation observed from astrophysical systems containing relativistic jets and shocks, e.g., gamma-ray bursts (GRBs), active galactic nuclei (AGNs), and Galactic microquasar systems usually have power-law emission spectra. Recent PIC simulations using injected relativistic electron-ion (electro-positron) jets show that acceleration occurs within the downstream jet. Shock acceleration is a ubiquitous phenomenon in astrophysical plasmas. Plasma waves and their associated instabilities (e.g., the Buneman instability, other two-streaming instability, and the Weibel instability) created in the shocks are responsible for particle (electron, positron, and ion) acceleration. The simulation results show that the Weibel instability is responsible for generating and amplifying highly nonuniform, small-scale magnetic fields. These magnetic fields contribute to the electron's transverse deflection behind the jet head. The "'jitter" radiation from deflected electrons has different properties than synchrotron radiation which is calculated in a uniform magnetic field. This jitter radiation may be important to understanding the complex time evolution and/or spectral structure in gamma-ray bursts, relativistic jets, and supernova remnants.

  18. Particle-in-Cell Simulations of Collisionless Magnetic Reconnection with a Non-Uniform Guide Field

    NASA Astrophysics Data System (ADS)

    Wilson, Fiona; Neukirch, Thomas; Hesse, Michael

    2016-04-01

    Results are presented of a first study of collisionless magnetic reconnection starting from a recently found exact nonlinear force-free Vlasov-Maxwell equilibrium. The initial state has a Harris sheet magnetic field profile in one direction and a non-uniform guide field in a second direction, resulting in a spatially constant magnetic field strength as well as a constant initial plasma density and plasma pressure. It is found that the reconnection process initially resembles guide field reconnection, but that a gradual transition to anti-parallel reconnection happens as the system evolves. The time evolution of a number of plasma parameters is investigated, and the results are compared with simulations starting from a Harris sheet equilibrium and a Harris sheet plus constant guide field equilibrium.

  19. Particle-in-cell simulations of collisionless magnetic reconnection with a non-uniform guide field

    NASA Astrophysics Data System (ADS)

    Wilson, F.; Neukirch, T.; Hesse, M.; Harrison, M. G.; Stark, C. R.

    2016-03-01

    Results are presented of a first study of collisionless magnetic reconnection starting from a recently found exact nonlinear force-free Vlasov-Maxwell equilibrium. The initial state has a Harris sheet magnetic field profile in one direction and a non-uniform guide field in a second direction, resulting in a spatially constant magnetic field strength as well as a constant initial plasma density and plasma pressure. It is found that the reconnection process initially resembles guide field reconnection, but that a gradual transition to anti-parallel reconnection happens as the system evolves. The time evolution of a number of plasma parameters is investigated, and the results are compared with simulations starting from a Harris sheet equilibrium and a Harris sheet plus constant guide field equilibrium.

  20. Particle-in-cell/accelerator code for space-charge dominated beam simulation

    SciTech Connect

    2012-05-08

    Warp is a multidimensional discrete-particle beam simulation program designed to be applicable where the beam space-charge is non-negligible or dominant. It is being developed in a collaboration among LLNL, LBNL and the University of Maryland. It was originally designed and optimized for heave ion fusion accelerator physics studies, but has received use in a broader range of applications, including for example laser wakefield accelerators, e-cloud studies in high enery accelerators, particle traps and other areas. At present it incorporates 3-D, axisymmetric (r,z) planar (x-z) and transverse slice (x,y) descriptions, with both electrostatic and electro-magnetic fields, and a beam envelope model. The code is guilt atop the Python interpreter language.

  1. Features of electron current layers: Comparison between three-dimensional particle-in-cell simulations and Cluster observations

    NASA Astrophysics Data System (ADS)

    Singh, Nagendra; Yeladandi, Manish; Somarothu, Trinath; Wells, B. E.

    2010-04-01

    Wygant et al. (2005) and more recently Chen et al. (2008) reported Cluster observations on some basic features of electron current layers (ECL) in the magnetotail. These features include (1) a bifurcated ECL consisting of two layers with relatively large currents separated by a region of small current, (2) peaked density at the ECL center bordered by extended low-density regions, (3) bipolar Hall electric fields (EHall), (4) fine-scale, large-amplitude spiky turbulence in the electric fields normal to the plane of the ECL (En), (5) energized electrons that become increasingly isotropized toward the ECL central region, (6) cold electrons bordering the ECL, (7) ions accelerated by the Hall electric field, and (8) ions counterstreaming against the ions accelerated by EHall on both the north and south sides of the neutral sheet at the ECL midplane. We compare all these features with results from fully three-dimensional particle-in-cell simulations of an ECL. Simulations reveal that the fine structures in the electric fields inside the ECL are created by the ECL-driven electrostatic instabilities, which are instrumental in rapid heating and isotropization of the electrons with power law energy distribution, Fe(E) ≈ E-0.7. The heated electrons set up ambipolar electric fields (Ea) in the central part of the ECL, reflecting ions accelerated by EHall. The overall structures in the normal electric fields result from the superposition of EHall, Ea, and the instability-generated electric fields.

  2. Particle-in-cell Simulations of Continuously Driven Mirror and Ion Cyclotron Instabilities in High Beta Astrophysical and Heliospheric Plasmas

    NASA Astrophysics Data System (ADS)

    Riquelme, Mario A.; Quataert, Eliot; Verscharen, Daniel

    2015-02-01

    We use particle-in-cell simulations to study the nonlinear evolution of ion velocity space instabilities in an idealized problem in which a background velocity shear continuously amplifies the magnetic field. We simulate the astrophysically relevant regime where the shear timescale is long compared to the ion cyclotron period, and the plasma beta is β ~ 1-100. The background field amplification in our calculation is meant to mimic processes such as turbulent fluctuations or MHD-scale instabilities. The field amplification continuously drives a pressure anisotropy with p > p ∥ and the plasma becomes unstable to the mirror and ion cyclotron instabilities. In all cases, the nonlinear state is dominated by the mirror instability, not the ion cyclotron instability, and the plasma pressure anisotropy saturates near the threshold for the linear mirror instability. The magnetic field fluctuations initially undergo exponential growth but saturate in a secular phase in which the fluctuations grow on the same timescale as the background magnetic field (with δB ~ 0.3 langBrang in the secular phase). At early times, the ion magnetic moment is well-conserved but once the fluctuation amplitudes exceed δB ~ 0.1 langBrang, the magnetic moment is no longer conserved but instead changes on a timescale comparable to that of the mean magnetic field. We discuss the implications of our results for low-collisionality astrophysical plasmas, including the near-Earth solar wind and low-luminosity accretion disks around black holes.

  3. Cross-Platform Graphical User Interface with fast 3-D Rendering for Particle-in-Cell Simulations

    NASA Astrophysics Data System (ADS)

    Bruhwiler, David; Luetkemeyer, Kelly; Cary, John

    1999-11-01

    The Graphical User Interface (GUI) for XOOPIC (X11-based Object-Oriented Particle-in-Cell) is being ported to Qt, a cross-platform C++ windowing toolkit, thus permitting the code to run on PC's running both Windows 95/98/NT and Linux, as well as all commercial Unix platforms. All 3-D graphics will be handled through OpenGL, the cross-platform standard for fast 3-D rendering. The use of object-oriented design (OOD) techniques keeps the GUI/physics interface clean, and minimizes the impact of GUI development on the physics code. OOD also improves the maintainability and extensibility of large scientific simulation codes, while allowing for cross-platform portability and ready interchange of individual algorithms or entire physics kernels. Planned new GUI features include interactive modifications of the simulation parameters, including generation of a slowly-varying mesh and automatic updating of a corresponding input file. Improved modeling of high-power microwave tubes is one of the primary applications being targeted by this project.

  4. Monte Carlo approach to calculate ionization dynamics of hot solid-density plasmas within particle-in-cell simulations.

    PubMed

    Wu, D; He, X T; Yu, W; Fritzsche, S

    2017-02-01

    A physical model based on a Monte Carlo approach is proposed to calculate the ionization dynamics of hot-solid-density plasmas within particle-in-cell (PIC) simulations, and where the impact (collision) ionization (CI), electron-ion recombination (RE), and ionization potential depression (IPD) by surrounding plasmas are taken into consideration self-consistently. When compared with other models, which are applied in the literature for plasmas near thermal equilibrium, the temporal relaxation of ionization dynamics can also be simulated by the proposed model. Besides, this model is general and can be applied for both single elements and alloys with quite different compositions. The proposed model is implemented into a PIC code, with (final) ionization equilibriums sustained by competitions between CI and its inverse process (i.e., RE). Comparisons between the full model and model without IPD or RE are performed. Our results indicate that for bulk aluminium at temperature of 1 to 1000 eV, (i) the averaged ionization degree increases by including IPD; while (ii) the averaged ionization degree is significantly over estimated when the RE is neglected. A direct comparison from the PIC code is made with the existing models for the dependence of averaged ionization degree on thermal equilibrium temperatures and shows good agreements with that generated from Saha-Boltzmann model and/or FLYCHK code.

  5. Electron Accelerations at High Mach Number Shocks: Two-dimensional Particle-in-cell Simulations in Various Parameter Regimes

    NASA Astrophysics Data System (ADS)

    Matsumoto, Yosuke; Amano, Takanobu; Hoshino, Masahiro

    2012-08-01

    Electron accelerations at high Mach number collisionless shocks are investigated by means of two-dimensional electromagnetic particle-in-cell simulations with various Alfvén Mach numbers, ion-to-electron mass ratios, and the upstream electron β e (the ratio of the thermal pressure to the magnetic pressure). We find electrons are effectively accelerated at a super-high Mach number shock (MA ~ 30) with a mass ratio of M/m = 100 and β e = 0.5. The electron shock surfing acceleration is an effective mechanism for accelerating the particles toward the relativistic regime even in two dimensions with a large mass ratio. Buneman instability excited at the leading edge of the foot in the super-high Mach number shock results in a coherent electrostatic potential structure. While multi-dimensionality allows the electrons to escape from the trapping region, they can interact with the strong electrostatic field several times. Simulation runs in various parameter regimes indicate that the electron shock surfing acceleration is an effective mechanism for producing relativistic particles in extremely high Mach number shocks in supernova remnants, provided that the upstream electron temperature is reasonably low.

  6. Electron Accelerations at High Mach Number Shocks: Two-Dimensional Particle-in-Cell Simulations in Various Parameter Regimes

    NASA Astrophysics Data System (ADS)

    Matsumoto, Y.; Amano, T.; Hoshino, M.

    2012-12-01

    Electron accelerations at high Mach number collision-less shocks are investigated by means of two-dimensional electromagnetic Particle-in-Cell simulations with various Alfven Mach numbers, ion-to-electron mass ratios, and the upstream electron βe (the ratio of the thermal pressure to the magnetic pressure). We found electrons are effectively accelerated at a super-high Mach number shock (MA ~ 30) with a mass ratio of M/m=100 and βe=0.5. The electron shock surfing acceleration is an effective mechanism for accelerating the particles toward the relativistic regime even in two dimensions with the large mass ratio. Buneman instability excited at the leading edge of the foot in the super-high Mach number shock results in a coherent electrostatic potential structure. While multi-dimensionality allows the electrons to escape from the trapping region, they can interact with the strong electrostatic field several times. Simulation runs in various parameter regimes indicate that the electron shock surfing acceleration is an effective mechanism for producing relativistic particles in extremely-high Mach number shocks in supernova remnants, provided that the upstream electron temperature is reasonably low. Matsumoto et al., Astrophys. J., 755, 109, 2012.

  7. Modeling a thermionic energy converter using finite-difference time-domain particle-in-cell simulations

    NASA Astrophysics Data System (ADS)

    Lo, F. S.; Lu, P. S.; Ragan-Kelley, B.; Minnich, A. J.; Lee, T. H.; Lin, M. C.; Verboncoeur, J. P.

    2014-02-01

    A thermionic energy converter (TEC) is a static device that converts heat directly into electricity by boiling electrons off a hot emitter surface across a small inter-electrode gap to a cooler collector surface. The main challenge in TECs is overcoming the space charge limit, which limits the current transmitted across a gap of a given voltage and width. We have verified the feasibility of studying and developing a TEC using a bounded finite-difference time-domain particle-in-cell plasma simulation code, OOPD1, developed by Plasma Theory and Simulation Group, formerly at UC Berkeley and now at Michigan State University. In this preliminary work, a TEC has been modeled kinetically using OOPD1, and the accuracy has been verified by comparing with an analytically solvable case, giving good agreement. With further improvement of the code, one will be able to quickly and cheaply analyze space charge effects, and seek designs that mitigate the space charge effect, allowing TECs to become more efficient and cost-effective.

  8. Monte Carlo particle-in-cell methods for the simulation of the Vlasov-Maxwell gyrokinetic equations

    NASA Astrophysics Data System (ADS)

    Bottino, A.; Sonnendrücker, E.

    2015-10-01

    > The particle-in-cell (PIC) algorithm is the most popular method for the discretisation of the general 6D Vlasov-Maxwell problem and it is widely used also for the simulation of the 5D gyrokinetic equations. The method consists of coupling a particle-based algorithm for the Vlasov equation with a grid-based method for the computation of the self-consistent electromagnetic fields. In this review we derive a Monte Carlo PIC finite-element model starting from a gyrokinetic discrete Lagrangian. The variations of the Lagrangian are used to obtain the time-continuous equations of motion for the particles and the finite-element approximation of the field equations. The Noether theorem for the semi-discretised system implies a certain number of conservation properties for the final set of equations. Moreover, the PIC method can be interpreted as a probabilistic Monte Carlo like method, consisting of calculating integrals of the continuous distribution function using a finite set of discrete markers. The nonlinear interactions along with numerical errors introduce random effects after some time. Therefore, the same tools for error analysis and error reduction used in Monte Carlo numerical methods can be applied to PIC simulations.

  9. PARTICLE-IN-CELL SIMULATIONS OF CONTINUOUSLY DRIVEN MIRROR AND ION CYCLOTRON INSTABILITIES IN HIGH BETA ASTROPHYSICAL AND HELIOSPHERIC PLASMAS

    SciTech Connect

    Riquelme, Mario A.; Quataert, Eliot; Verscharen, Daniel E-mail: eliot@berkeley.edu

    2015-02-10

    We use particle-in-cell simulations to study the nonlinear evolution of ion velocity space instabilities in an idealized problem in which a background velocity shear continuously amplifies the magnetic field. We simulate the astrophysically relevant regime where the shear timescale is long compared to the ion cyclotron period, and the plasma beta is β ∼ 1-100. The background field amplification in our calculation is meant to mimic processes such as turbulent fluctuations or MHD-scale instabilities. The field amplification continuously drives a pressure anisotropy with p > p {sub ∥} and the plasma becomes unstable to the mirror and ion cyclotron instabilities. In all cases, the nonlinear state is dominated by the mirror instability, not the ion cyclotron instability, and the plasma pressure anisotropy saturates near the threshold for the linear mirror instability. The magnetic field fluctuations initially undergo exponential growth but saturate in a secular phase in which the fluctuations grow on the same timescale as the background magnetic field (with δB ∼ 0.3 (B) in the secular phase). At early times, the ion magnetic moment is well-conserved but once the fluctuation amplitudes exceed δB ∼ 0.1 (B), the magnetic moment is no longer conserved but instead changes on a timescale comparable to that of the mean magnetic field. We discuss the implications of our results for low-collisionality astrophysical plasmas, including the near-Earth solar wind and low-luminosity accretion disks around black holes.

  10. ELECTRON ACCELERATIONS AT HIGH MACH NUMBER SHOCKS: TWO-DIMENSIONAL PARTICLE-IN-CELL SIMULATIONS IN VARIOUS PARAMETER REGIMES

    SciTech Connect

    Matsumoto, Yosuke; Amano, Takanobu; Hoshino, Masahiro

    2012-08-20

    Electron accelerations at high Mach number collisionless shocks are investigated by means of two-dimensional electromagnetic particle-in-cell simulations with various Alfven Mach numbers, ion-to-electron mass ratios, and the upstream electron {beta}{sub e} (the ratio of the thermal pressure to the magnetic pressure). We find electrons are effectively accelerated at a super-high Mach number shock (M{sub A} {approx} 30) with a mass ratio of M/m = 100 and {beta}{sub e} = 0.5. The electron shock surfing acceleration is an effective mechanism for accelerating the particles toward the relativistic regime even in two dimensions with a large mass ratio. Buneman instability excited at the leading edge of the foot in the super-high Mach number shock results in a coherent electrostatic potential structure. While multi-dimensionality allows the electrons to escape from the trapping region, they can interact with the strong electrostatic field several times. Simulation runs in various parameter regimes indicate that the electron shock surfing acceleration is an effective mechanism for producing relativistic particles in extremely high Mach number shocks in supernova remnants, provided that the upstream electron temperature is reasonably low.

  11. A comparison of weak-turbulence and particle-in-cell simulations of weak electron-beam plasma interaction

    SciTech Connect

    Ratcliffe, H. Brady, C. S.; Che Rozenan, M. B.; Nakariakov, V. M.

    2014-12-15

    Quasilinear theory has long been used to treat the problem of a weak electron beam interacting with plasma and generating Langmuir waves. Its extension to weak-turbulence theory treats resonant interactions of these Langmuir waves with other plasma wave modes, in particular, ion-sound waves. These are strongly damped in plasma of equal ion and electron temperatures, as sometimes seen in, for example, the solar corona and wind. Weak turbulence theory is derived in the weak damping limit, with a term describing ion-sound wave damping then added. In this paper, we use the EPOCH particle-in-cell code to numerically test weak turbulence theory for a range of electron-ion temperature ratios. We find that in the cold ion limit, the results agree well, but for increasing ion temperature the three-wave resonance becomes broadened in proportion to the ion-sound wave damping rate. Additionally, we establish lower limits on the number of simulation particles needed to accurately reproduce the electron and wave distributions in their saturated states and to reproduce their intermediate states and time evolution. These results should be taken into consideration in, for example, simulations of plasma wave generation in the solar corona of Type III solar radio bursts from the corona to the solar wind and in weak turbulence investigations of ion-acoustic lines in the ionosphere.

  12. Comparison of multi-fluid moment models with particle-in-cell simulations of collisionless magnetic reconnection

    SciTech Connect

    Wang, Liang Germaschewski, K.; Hakim, Ammar H.; Bhattacharjee, A.

    2015-01-15

    We introduce an extensible multi-fluid moment model in the context of collisionless magnetic reconnection. This model evolves full Maxwell equations and simultaneously moments of the Vlasov-Maxwell equation for each species in the plasma. Effects like electron inertia and pressure gradient are self-consistently embedded in the resulting multi-fluid moment equations, without the need to explicitly solving a generalized Ohm's law. Two limits of the multi-fluid moment model are discussed, namely, the five-moment limit that evolves a scalar pressures for each species and the ten-moment limit that evolves the full anisotropic, non-gyrotropic pressure tensor for each species. We first demonstrate analytically and numerically that the five-moment model reduces to the widely used Hall magnetohydrodynamics (Hall MHD) model under the assumptions of vanishing electron inertia, infinite speed of light, and quasi-neutrality. Then, we compare ten-moment and fully kinetic particle-in-cell (PIC) simulations of a large scale Harris sheet reconnection problem, where the ten-moment equations are closed with a local linear collisionless approximation for the heat flux. The ten-moment simulation gives reasonable agreement with the PIC results regarding the structures and magnitudes of the electron flows, the polarities and magnitudes of elements of the electron pressure tensor, and the decomposition of the generalized Ohm's law. Possible ways to improve the simple local closure towards a nonlocal fully three-dimensional closure are also discussed.

  13. Monte Carlo approach to calculate ionization dynamics of hot solid-density plasmas within particle-in-cell simulations

    NASA Astrophysics Data System (ADS)

    Wu, D.; He, X. T.; Yu, W.; Fritzsche, S.

    2017-02-01

    A physical model based on a Monte Carlo approach is proposed to calculate the ionization dynamics of hot-solid-density plasmas within particle-in-cell (PIC) simulations, and where the impact (collision) ionization (CI), electron-ion recombination (RE), and ionization potential depression (IPD) by surrounding plasmas are taken into consideration self-consistently. When compared with other models, which are applied in the literature for plasmas near thermal equilibrium, the temporal relaxation of ionization dynamics can also be simulated by the proposed model. Besides, this model is general and can be applied for both single elements and alloys with quite different compositions. The proposed model is implemented into a PIC code, with (final) ionization equilibriums sustained by competitions between CI and its inverse process (i.e., RE). Comparisons between the full model and model without IPD or RE are performed. Our results indicate that for bulk aluminium at temperature of 1 to 1000 eV, (i) the averaged ionization degree increases by including IPD; while (ii) the averaged ionization degree is significantly over estimated when the RE is neglected. A direct comparison from the PIC code is made with the existing models for the dependence of averaged ionization degree on thermal equilibrium temperatures and shows good agreements with that generated from Saha-Boltzmann model and/or FLYCHK code.

  14. Whistler Anisotropy Instabilities as the Source of Banded Chorus: Van Allen Probes Observations and Particle-in-Cell Simulations

    NASA Astrophysics Data System (ADS)

    Gary, S. Peter; Fu, Xiangrong; Cowee, Misa M.; Friedel, Reinhard H.; Funsten, Herbert O.; Hospodarsky, George B.; Kletzing, Craig; Kurth, William; Larsen, Brian A.; Liu, Kaijun; MacDonald, Elizabeth A.; Min, Kyungguk; Reeves, Geoffrey D.; Skoug, Ruth M.; Winske, Dan

    2014-10-01

    Magnetospheric banded chorus events are enhanced whistler waves with frequencies ωr <Ωe where Ωe is the electron cyclotron frequency, and a characteristic spectral gap at ωr ~=Ωe / 2 . Here two-dimensional particle-in-cell simulations in a magnetized, homogeneous, collisionless plasma test the hypothesis that banded chorus is due to two branches of the whistler anisotropy instability excited by two distinct, anisotropic electron components. The electron densities and temperatures are derived from HOPE instrument measurements on the Van Allen Probes A satellite during a banded chorus event on 1 November 2012. Observations show a three-component electron model consisting of a dense, cold (a few tens of eV) population, a less dense, warm (a few hundred eV) anisotropic population, and a still less dense, hot (a few keV) anisotropic population. Simulations show that the warm component drives quasi-electrostatic upper-band chorus, and the hot component drives electromagnetic lower-band chorus; the gap near Ωe / 2 follows from growth of the two distinct instabilities.

  15. Verification of high voltage rf capacitive sheath models with particle-in-cell simulations

    NASA Astrophysics Data System (ADS)

    Wang, Ying; Lieberman, Michael; Verboncoeur, John

    2009-10-01

    Collisionless and collisional high voltage rf capacitive sheath models were developed in the late 1980's [1]. Given the external parameters of a single-frequency capacitively coupled discharge, plasma parameters including sheath width, electron and ion temperature, plasma density, power, and ion bombarding energy can be estimated. One-dimensional electrostatic PIC codes XPDP1 [2] and OOPD1 [3] are used to investigate plasma behaviors within rf sheaths and bulk plasma. Electron-neutral collisions only are considered for collisionless sheaths, while ion-neutral collisions are taken into account for collisional sheaths. The collisionless sheath model is verified very well by PIC simulations for the rf current-driven and voltage-driven cases. Results will be reported for collisional sheaths also. [1] M. A. Lieberman, IEEE Trans. Plasma Sci. 16 (1988) 638; 17 (1989) 338 [2] J. P. Verboncoeur, M. V. Alves, V. Vahedi, and C. K. Birdsall, J. Comp. Phys. 104 (1993) 321 [3] J. P. Verboncoeur, A. B. Langdon and N. T. Gladd, Comp. Phys. Comm. 87 (1995) 199

  16. Three-dimensional particle-in-cell simulations of a plasma jet/cloud streaming across a transverse magnetic field

    NASA Astrophysics Data System (ADS)

    Voitcu, Gabriel; Echim, Marius

    2014-05-01

    The dynamics of collisionless plasma jets/clouds in magnetic field configurations typical for the terrestrial magnetotail and frontside magnetosheath is a topic of interest for understanding the physics of the magnetosphere and its interaction with the solar wind. The presence of high-speed jets in the frontside magnetosheath has been recently proved experimentally by Cluster and THEMIS spacecrafts. There is increasing evidence that the bursty bulk flows in the magnetotail have jet-like features. In the present paper we use fully electromagnetic 3D explicit particle-in-cell (PIC) simulations to investigate the interaction of a localized three-dimensional plasma element/jet/cloud with a transverse magnetic field. We consider a plasma jet/cloud that moves in vacuum and perpendicular to an ambient magnetic field. Ampère and Faraday's laws are used to compute the self-consistent electric and magnetic fields on a three-dimensional spatial grid having a step-size of the order of the Debye length and using a time-step that resolves the plasma frequency. The initial magnetic field inside the simulation domain is uniform and the plasma bulk velocity at the beginning of the simulation is normal to the magnetic field direction. The total time scale of the simulation is of the order of few ion Larmor periods. Space and time variations of the plasma parameters and of the electromagnetic field are analyzed and discussed. We emphasize non-MHD effects like the energy-dispersion signatures at the edges of the plasma element, similar to results previously reported by Voitcu and Echim (2012) using test-kinetic simulations. Acknowledgments: Research supported by the European Community's Seventh Framework Programme (FP7/2007-2013) under grant agreement no. 313038/STORM, and a grant of the Romanian Ministry of National Education, CNCS - UEFISCDI, project number PN-II-ID-PCE-2012-4-0418.

  17. Particle-In-Cell Simulations of the Solar Wind Interaction with Lunar Crustal Magnetic Anomalies: Magnetic Cusp Regions

    NASA Technical Reports Server (NTRS)

    Poppe, A. R.; Halekas, J. S.; Delory, G. T.; Farrell, W. M.

    2012-01-01

    As the solar wind is incident upon the lunar surface, it will occasionally encounter lunar crustal remanent magnetic fields. These magnetic fields are small-scale, highly non-dipolar, have strengths up to hundreds of nanotesla, and typically interact with the solar wind in a kinetic fashion. Simulations, theoretical analyses, and spacecraft observations have shown that crustal fields can reflect solar wind protons via a combination of magnetic and electrostatic reflection; however, analyses of surface properties have suggested that protons may still access the lunar surface in the cusp regions of crustal magnetic fields. In this first report from a planned series of studies, we use a 1 1/2-dimensional, electrostatic particle-in-cell code to model the self-consistent interaction between the solar wind, the cusp regions of lunar crustal remanent magnetic fields, and the lunar surface. We describe the self-consistent electrostatic environment within crustal cusp regions and discuss the implications of this work for the role that crustal fields may play regulating space weathering of the lunar surface via proton bombardment.

  18. Particle-in-cell simulations of magnetic reconnection in laser-plasma experiments on Shenguang-II facility

    SciTech Connect

    Lu, San; Lu, Quanming; Huang, Can; Wang, Shui; Dong, Quanli; Zhu, Jianqiang; Sheng, Zhengming; Zhang, Jie

    2013-11-15

    Recently, magnetic reconnection has been realized in high-energy-density laser-produced plasmas. Plasma bubbles with self-generated magnetic fields are created by focusing laser beams to small-scale spots on a foil. The bubbles expand into each other, which may then drive magnetic reconnection. The reconnection experiment in laser-produced plasmas has also been conducted at Shenguang-II (SG-II) laser facility, and the existence of a plasmoid was identified in the experiment [Dong et al., Phys. Rev. Lett. 108, 215001 (2012)]. In this paper, by performing two-dimensional (2-D) particle-in-cell simulations, we investigate such a process of magnetic reconnection based on the experiment on SG-II facility, and a possible explanation for the formation of the plasmoid is proposed. The results show that before magnetic reconnection occurs, the bubbles squeeze strongly each other and a very thin current sheet is formed. The current sheet is unstable to the tearing mode instability, and we can then observe the formation of plasmoid(s) in such a multiple X-lines reconnection.

  19. A simulation of a capacitively coupled oxygen discharge using the oopd1 particle-in-cell Monte Carlo code

    NASA Astrophysics Data System (ADS)

    Gudmundsson, J. T.; Lieberman, M. A.; Wang, Ying; Verboncoeur, J. P.

    2009-10-01

    The oopd1 particle-in-cell Monte Carlo (PIC-MC) code is used to simulate a capacitively coupled discharge in oxygen. oopd1 is a one-dimensional object-oriented PIC-MC code [1] in which the model system has one spatial dimension and three velocity components. It contains models for planar, cylindrical, and spherical geometries and replaces the XPDx1 series [2], which is not object-oriented. The revised oxygen model includes, in addition to electrons, the oxygen molecule in ground state, the oxygen atom in ground state, the negative ion O^-, and the positive ions O^+ and O2^+. The cross sections for the collisions among the oxygen species have been significantly revised from earlier work using the xpdp1 code [3]. Here we explore the electron energy distribution function (EEDF), the ion energy distribution function (IEDF) and the density profiles for various pressures and driving frequencies. In particular we investigate the influence of the O^+ ion on the IEDF, we explore the influence of multiple driving frequencies, and we do comparisons to the previous xpdx1 codes. [1] J. P. Verboncoeur, A. B. Langdon, and N. T. Gladd, Comp. Phys. Comm. 87 (1995) 199 [2] J. P. Verboncoeur, M. V. Alves, V. Vahedi, and C. K. Birdsall, J. Comp. Physics 104 (1993) 321 [2] V. Vahedi and M. Surendra, Comp. Phys. Comm. 87 (1995) 179

  20. Three-dimensional simple conformal symplectic particle-in-cell methods for simulations of high power microwave devices

    NASA Astrophysics Data System (ADS)

    Wang, Yue; Wang, Jianguo; Chen, Zaigao; Cheng, Guoxin; Wang, Pan

    2016-08-01

    To overcome the staircase error in the traditional particle-in-cell (PIC) method, a three dimensional (3D) simple conformal (SC) symplectic PIC method is presented in this paper. The SC symplectic finite integration technique (FIT) scheme is used to advance the electromagnetic fields without reduction of the time step. Particles are emitted from conformal boundaries with the charge conserving emission scheme and moved by using the relativistic Newton-Lorentz force equation. The symplectic formulas of auxiliary-differential equation, complex frequency shifted perfectly matched layer (ADE-CFS-PML) are given for truncating the open boundaries, numerical results show that the maximum relative error of truncation is less than 90 dB. Based on the surface equivalence theorem, the computing algorithms of conformal signals' injection are given, numerical results show that the algorithms can give the right mode patterns and the errors of cutoff frequencies could be as low as 0.1%. To verify the conformal algorithms, a magnetically insulated line oscillator is simulated, and the results are compared to those provided by using the 2.5D UNIPIC code, which show that they agree well. The results also show that the high order symplectic integration method can suppress the numerical Cherenkov radiation.

  1. Investigation of Rising-Sun Magnetrons Operated at Relativistic Voltages Using Three Dimensional Particle-in-Cell Simulations

    SciTech Connect

    Lemke, R.W.; Genoni, T.C.; Spencer, T.A.

    1999-08-02

    This work is an attempt to elucidate effects that may limit efficiency in magnetrons operated at relativistic voltages (V {approximately} 500 kV). Three-dimensional particle-in-cell simulation is used to investigate the behavior of 14 and 22 cavity, cylindrical, rising-sun magnetrons. Power is extracted radially through a single iris located at the end of every other cavity. Numerical results show that in general output power and efficiency increase approximately linearly with increasing iris width (decreasing vacuum Q) until the total Q becomes too low for stable oscillation in the n-mode to be maintained. Beyond this point mode competition and/or switching occur and efficiency decreases. Results reveal that the minimum value of Q (maximum efficiency) that can be achieved prior to the onset of mode competition is significantly affected by the magnitude of the 0-space-harmonic of the {pi}-mode, a unique characteristic of rising-suns, and by the magnitude of the electron current density (space-charge effects). By minimizing these effects, up to 3.7 GW output power has been produced at an efficiency of 40%.

  2. Low frequency, electrodynamic simulation of kinetic plasmas with the DArwin Direct Implicit Particle-In-Cell (DADIPIC) method

    SciTech Connect

    Gibbons, Matthew Richard

    1995-06-01

    This dissertation describes a new algorithm for simulating low frequency, kinetic phenomena in plasmas. DArwin Direct Implicit Particle-in-Cell (DADIPIC), as its name implies, is a combination of the Darwin and direct implicit methods. One of the difficulties in simulating plasmas lies in the enormous disparity between the fundamental scale lengths of a plasma and the scale lengths of the phenomena of interest. The objective is to create models which can ignore the fundamental constraints without eliminating relevant plasma properties. Over the past twenty years several PIC methods have been investigated for overcoming the constraints on explicit electrodynamic PIC. These models eliminate selected high frequency plasma phenomena while retaining kinetic phenomena at low frequency. This dissertation shows that the combination of Darwin and Direct Implicit allows them to operate better than they have been shown to operate in the past. Through the Darwin method the hyperbolic Maxwell`s equations are reformulated into a set of elliptic equations. Propagating light waves do not exist in the formulation so the Courant constraint on the time step is eliminated. The Direct Implicit method is applied only to the electrostatic field with the result that electrostatic plasma oscillations do not have to be resolved for stability. With the elimination of these constraints spatial and temporal discretization can be much larger than that possible with explicit, electrodynamic PIC. The code functions in a two dimensional Cartesian region and has been implemented with all components of the particle velocities, the E-field, and the B-field. Internal structures, conductors or dielectrics, may be placed in the simulation region, can be set at desired potentials, and driven with specified currents.

  3. Whistler anisotropy instabilities as the source of banded chorus: Van Allen Probes observations and particle-in-cell simulations

    SciTech Connect

    Fu, Xiangrong; Cowee, Misa M.; Friedel, Reinhard H.; Funsten, Herbert O.; Gary, S. Peter; Hospodarsky, George B.; Kletzing, Craig; Kurth, William; Larsen, Brian A.; Liu, Kaijun; MacDonald, Elizabeth A.; Reeves, Geoffrey D.; Skoug, Ruth M.; Winske, Dan

    2014-10-22

    Magnetospheric banded chorus is enhanced whistler waves with frequencies ωr < Ωe, where Ωe is the electron cyclotron frequency, and a characteristic spectral gap at ωr ≃ Ωe/2. This paper uses spacecraft observations and two-dimensional particle-in-cell simulations in a magnetized, homogeneous, collisionless plasma to test the hypothesis that banded chorus is due to local linear growth of two branches of the whistler anisotropy instability excited by two distinct, anisotropic electron components of significantly different temperatures. The electron densities and temperatures are derived from Helium, Oxygen, Proton, and Electron instrument measurements on the Van Allen Probes A satellite during a banded chorus event on 1 November 2012. The observations are consistent with a three-component electron model consisting of a cold (a few tens of eV) population, a warm (a few hundred eV) anisotropic population, and a hot (a few keV) anisotropic population. The simulations use plasma and field parameters as measured from the satellite during this event except for two numbers: the anisotropies of the warm and the hot electron components are enhanced over the measured values in order to obtain relatively rapid instability growth. The simulations show that the warm component drives the quasi-electrostatic upper band chorus and that the hot component drives the electromagnetic lower band chorus; the gap at ~Ωe/2 is a natural consequence of the growth of two whistler modes with different properties.

  4. Gyrokinetic and kinetic particle-in-cell simulations of guide-field reconnection. I. Macroscopic effects of the electron flows

    SciTech Connect

    Muñoz, P. A. Kilian, P.; Büchner, J.; Told, D.; Jenko, F.

    2015-08-15

    In this work, we compare gyrokinetic (GK) with fully kinetic Particle-in-Cell (PIC) simulations of magnetic reconnection in the limit of strong guide field. In particular, we analyze the limits of applicability of the GK plasma model compared to a fully kinetic description of force free current sheets for finite guide fields (b{sub g}). Here, we report the first part of an extended comparison, focusing on the macroscopic effects of the electron flows. For a low beta plasma (β{sub i} = 0.01), it is shown that both plasma models develop magnetic reconnection with similar features in the secondary magnetic islands if a sufficiently high guide field (b{sub g} ≳ 30) is imposed in the kinetic PIC simulations. Outside of these regions, in the separatrices close to the X points, the convergence between both plasma descriptions is less restrictive (b{sub g} ≳ 5). Kinetic PIC simulations using guide fields b{sub g} ≲ 30 reveal secondary magnetic islands with a core magnetic field and less energetic flows inside of them in comparison to the GK or kinetic PIC runs with stronger guide fields. We find that these processes are mostly due to an initial shear flow absent in the GK initialization and negligible in the kinetic PIC high guide field regime, in addition to fast outflows on the order of the ion thermal speed that violate the GK ordering. Since secondary magnetic islands appear after the reconnection peak time, a kinetic PIC/GK comparison is more accurate in the linear phase of magnetic reconnection. For a high beta plasma (β{sub i} = 1.0) where reconnection rates and fluctuations levels are reduced, similar processes happen in the secondary magnetic islands in the fully kinetic description, but requiring much lower guide fields (b{sub g} ≲ 3)

  5. Whistler anisotropy instabilities as the source of banded chorus: Van Allen Probes observations and particle-in-cell simulations

    DOE PAGES

    Fu, Xiangrong; Cowee, Misa M.; Friedel, Reinhard H.; ...

    2014-10-22

    Magnetospheric banded chorus is enhanced whistler waves with frequencies ωr < Ωe, where Ωe is the electron cyclotron frequency, and a characteristic spectral gap at ωr ≃ Ωe/2. This paper uses spacecraft observations and two-dimensional particle-in-cell simulations in a magnetized, homogeneous, collisionless plasma to test the hypothesis that banded chorus is due to local linear growth of two branches of the whistler anisotropy instability excited by two distinct, anisotropic electron components of significantly different temperatures. The electron densities and temperatures are derived from Helium, Oxygen, Proton, and Electron instrument measurements on the Van Allen Probes A satellite during a bandedmore » chorus event on 1 November 2012. The observations are consistent with a three-component electron model consisting of a cold (a few tens of eV) population, a warm (a few hundred eV) anisotropic population, and a hot (a few keV) anisotropic population. The simulations use plasma and field parameters as measured from the satellite during this event except for two numbers: the anisotropies of the warm and the hot electron components are enhanced over the measured values in order to obtain relatively rapid instability growth. The simulations show that the warm component drives the quasi-electrostatic upper band chorus and that the hot component drives the electromagnetic lower band chorus; the gap at ~Ωe/2 is a natural consequence of the growth of two whistler modes with different properties.« less

  6. Particle Acceleration and Wave Excitation in Quasi-parallel High-Mach-number Collisionless Shocks: Particle-in-cell Simulation

    NASA Astrophysics Data System (ADS)

    Kato, Tsunehiko N.

    2015-04-01

    We herein investigate shock formation and particle acceleration processes for both protons and electrons in a quasi-parallel high-Mach-number collisionless shock through a long-term, large-scale, particle-in-cell simulation. We show that both protons and electrons are accelerated in the shock and that these accelerated particles generate large-amplitude Alfvénic waves in the upstream region of the shock. After the upstream waves have grown sufficiently, the local structure of the collisionless shock becomes substantially similar to that of a quasi-perpendicular shock due to the large transverse magnetic field of the waves. A fraction of protons are accelerated in the shock with a power-law-like energy distribution. The rate of proton injection to the acceleration process is approximately constant, and in the injection process, the phase-trapping mechanism for the protons by the upstream waves can play an important role. The dominant acceleration process is a Fermi-like process through repeated shock crossings of the protons. This process is a “fast” process in the sense that the time required for most of the accelerated protons to complete one cycle of the acceleration process is much shorter than the diffusion time. A fraction of the electrons are also accelerated by the same mechanism, and have a power-law-like energy distribution. However, the injection does not enter a steady state during the simulation, which may be related to the intermittent activity of the upstream waves. Upstream of the shock, a fraction of the electrons are pre-accelerated before reaching the shock, which may contribute to steady electron injection at a later time.

  7. PARTICLE ACCELERATION AND WAVE EXCITATION IN QUASI-PARALLEL HIGH-MACH-NUMBER COLLISIONLESS SHOCKS: PARTICLE-IN-CELL SIMULATION

    SciTech Connect

    Kato, Tsunehiko N.

    2015-04-01

    We herein investigate shock formation and particle acceleration processes for both protons and electrons in a quasi-parallel high-Mach-number collisionless shock through a long-term, large-scale, particle-in-cell simulation. We show that both protons and electrons are accelerated in the shock and that these accelerated particles generate large-amplitude Alfvénic waves in the upstream region of the shock. After the upstream waves have grown sufficiently, the local structure of the collisionless shock becomes substantially similar to that of a quasi-perpendicular shock due to the large transverse magnetic field of the waves. A fraction of protons are accelerated in the shock with a power-law-like energy distribution. The rate of proton injection to the acceleration process is approximately constant, and in the injection process, the phase-trapping mechanism for the protons by the upstream waves can play an important role. The dominant acceleration process is a Fermi-like process through repeated shock crossings of the protons. This process is a “fast” process in the sense that the time required for most of the accelerated protons to complete one cycle of the acceleration process is much shorter than the diffusion time. A fraction of the electrons are also accelerated by the same mechanism, and have a power-law-like energy distribution. However, the injection does not enter a steady state during the simulation, which may be related to the intermittent activity of the upstream waves. Upstream of the shock, a fraction of the electrons are pre-accelerated before reaching the shock, which may contribute to steady electron injection at a later time.

  8. Particle-in-cell Simulations of Electron and Ion Dissipation by Whistler Turbulence: Variations with Electron β

    NASA Astrophysics Data System (ADS)

    Hughes, R. Scott; Gary, S. Peter; Wang, Joseph

    2017-01-01

    Two ensembles of three-dimensional particle-in-cell (PIC) simulations of the forward cascade of decaying whistler turbulence have been carried out on a model of collisionless, homogeneous, magnetized plasma with parameters similar to those of the solar wind near Earth. Initial, relatively isotropic, narrowband spectra of relatively long wavelength modes cascade to anisotropic, broadband spectra of magnetic fluctuations at shorter wavelengths. Electron and ion dissipation rates are computed as functions of the initial electron beta, βe, over the range 0.1 ≤ βe ≤ 5.0, where this quantity is varied by changes in the background magnetic field magnitude Bo. Ensemble One holds the value of the dimensionless initial magnetic fluctuation energy density ɛo ≡ Σk | δ {B}{{k}}{| }2/{B}{{o}}2 constant; Ensemble Two follows solar wind observations, imposing the initial condition ɛo = 0.20 βe. In both ensembles, the maximum dissipation rate of the electrons, Qe, and the maximum dissipation rate of the ions, Qi, satisfy Qe ≫ Qi. In Ensemble One, both dissipation rates scale approximately as {β }{{e}}-1, whereas over 0.1 ≤ βe ≤ 1.0 in Ensemble Two, Qe is approximately constant while Qi scales approximately as {β }{{e}}1/2. These results, when combined with conclusions from earlier PIC simulations, suggest that sufficiently long wavelength and sufficiently large-amplitude magnetosonic-whistler turbulence at sufficiently large βe may heat ions more rapidly than electrons.

  9. Measurements And Particle In Cell vs. Fluid Simulations Of A New Time Domain Impedance Probe For Ionospheric Plasma Characterization

    NASA Astrophysics Data System (ADS)

    Spencer, E. A.; Russ, S.; Kerrigan, B.; Leggett, K.; Mullins, J.; Clark, D. C.; Mizell, J.; Gollapalli, R.; Vassiliadis, D.; Lusk, G. D.

    2015-12-01

    A plasma impedance probe is used to obtain plasma parameters in the ionosphere by measuring the magnitude, shape and location of resonances in the frequency spectrum when a probe structure is driven with RF excitation. The measured magnitude and phase response with respect to frequency can be analyzed via analytical and simulational means. We have designed and developed a new Time Domain Impedance Probe capable of making measurements of absolute electron density and electron neutral collision frequency at temporal and spatial resolutions not previously attained. A single measurement can be made in a time as short as 50 microseconds, which yields a spatial resolution of 0.35 meters for a satellite orbital velocity of 7 km/s. The method essentially consists of applying a small amplitude time limited voltage signal into a probe and measuring the resulting current response. The frequency bandwidth of the voltage signal is selected in order that the electron plasma resonances are observable. A prototype of the instrument will be flown in October 2015 on a NASA Undergraduate Student Instrument Progam (USIP) sounding rocket launched out of Wallops Flight Facility. To analyze the measurements, we use a Particle In Cell (PIC) kinetic simulation to calculate the impedance of a dipole antenna immersed in a plasma. The electromagnetic solver utilizes the Finite Difference Time Domain method, while the particle to grid and grid to particle interpolation schemes are standard. The plasma sheath formation electron flux into the dipole surface is not included. The bulk velocity of the plasma around the dipole is assumed to be zero. For completeness, the hot plasma and nonlinear effects of probe plasma interaction are explored, including the appearance of cyclotron harmonics. In this work the electron neutral collisions are simulated via a Poisson process approximation. Our results are compared to sounding rocket data from the NASA Tropical Storms mission in 2007, as well as the

  10. Plasma asymmetry due to the magnetic filter in fusion-type negative ion sources: Comparisons between two and three-dimensional particle-in-cell simulations

    SciTech Connect

    Fubiani, G. Boeuf, J. P.

    2014-07-15

    Previously reported 2D Particle-In-Cell Monte Carlo Collisions (PIC-MCC) simulations of negative ion sources under conditions similar to those of the ITER neutral beam injection system have shown that the presence of the magnetic filter tends to generate asymmetry in the plasma properties in the extraction region. In this paper, we show that these conclusions are confirmed by 3D PIC-MCC simulations and we provide quantitative comparisons between the 2D and 3D model predictions.

  11. Three-dimensional particle-in-cell simulations of rapid start-up in strapped oven magnetrons due to variation in the insulating magnetic field

    NASA Astrophysics Data System (ADS)

    Luginsland, J. W.; Lau, Y. Y.; Neculaes, V. B.; Gilgenbach, R. M.; Jones, M. C.; Frese, M. H.; Watrous, J. J.

    2004-06-01

    A three-dimensional parallel particle-in-cell code, ICEPIC, is used to simulate the geometry and the magnetic field profiles of the recent low-noise, fast startup magnetron experiments at the University of Michigan. The fast startup, the power levels, and the starting currents that have been observed in these experiments are quantitatively reproduced in the simulations. The tendency for low noise operation has also been reproduced with the use of an azimuthally varying magnetic field.

  12. Exact charge-conserving scatter-gather algorithm for particle-in-cell simulations on unstructured grids: A geometric perspective

    NASA Astrophysics Data System (ADS)

    Moon, Haksu; Teixeira, Fernando L.; Omelchenko, Yuri A.

    2015-09-01

    We describe a charge-conserving scatter-gather algorithm for particle-in-cell simulations on unstructured grids. Charge conservation is obtained from first principles, i.e., without the need for any post-processing or correction steps. This algorithm recovers, at a fundamental level, the scatter-gather algorithms presented recently by Campos-Pinto et al. (2014) (to first-order) and by Squire et al. (2012), but it is derived here in a streamlined fashion from a geometric viewpoint. Some ingredients reflecting this viewpoint are (1) the use of (discrete) differential forms of various degrees to represent fields, currents, and charged particles and provide localization rules for the degrees of freedom thereof on the various grid elements (nodes, edges, facets), (2) use of Whitney forms as basic interpolants from discrete differential forms to continuum space, and (3) use of a Galerkin formula for the discrete Hodge star operators (i.e., "mass matrices" incorporating the metric datum of the grid) applicable to generally irregular, unstructured grids. The expressions obtained for the scatter charges and scatter currents are very concise and do not involve numerical quadrature rules. Appropriate fractional areas within each grid element are identified that represent scatter charges and scatter currents within the element, and a simple geometric representation for the (exact) charge conservation mechanism is obtained by such identification. The field update is based on the coupled first-order Maxwell's curl equations to avoid spurious modes with secular growth (otherwise present in formulations that discretize the second-order wave equation). Examples are provided to verify preservation of discrete Gauss' law for all times.

  13. 3D Electromagnetic Particle-in-Cell simulations of the solar wind interaction with lunar magnetic anomalies

    NASA Astrophysics Data System (ADS)

    Deca, J.; Lapenta, G.; Divin, A. V.; Lembege, B.; Markidis, S.

    2013-12-01

    Unlike the Earth and Mercury, our Moon has no global magnetic field and is therefore not shielded from the impinging solar wind by a magnetosphere. However, lunar magnetic field measurements made by the Apollo missions provided direct evidence that the Moon has regions of small-scale crustal magnetic fields, ranging up to a few 100km in scale size with surface magnetic field strengths up to hundreds of nanoTeslas. More recently, the Lunar Prospector spacecraft has provided high-resolution observations allowing to construct magnetic field maps of the entire Moon, confirming the earlier results from Apollo, but also showing that the lunar plasma environment is much richer than earlier believed. Typically the small-scale magnetic fields are non-dipolar and rather tiny compared to the lunar radius and mainly clustered on the far side of the moon. Using iPic3D we present the first 3D fully kinetic and electromagnetic Particle-in-Cell simulations of the solar wind interaction with lunar magnetic anomalies. We study the behaviour of a dipole model with variable surface magnetic field strength under changing solar wind conditions and confirm that lunar crustal magnetic fields may indeed be strong enough to stand off the solar wind and form a mini-magnetosphere, as suggested by MHD and hybrid simulations and spacecraft observations. 3D-PIC simulations reveal to be very helpful to analyze the diversion/braking of the particle flux and the characteristics of the resulting particles accumulation. The particle flux to the surface is significantly reduced at the magnetic anomaly, surrounded by a region of enhanced density due to the magnetic mirror effect. Second, the ability of iPic3D to resolve all plasma components (heavy ions, protons and electrons) allows to discuss in detail the electron physics leading to the highly non-adiabatic interactions expected as well as the implications for solar wind shielding of the lunar surface, depending on the scale size (solar wind protons

  14. Non-linear evolution of the diocotron instability in a pulsar electrosphere: two-dimensional particle-in-cell simulations

    NASA Astrophysics Data System (ADS)

    Pétri, J.

    2009-08-01

    Context: The physics of the pulsar magnetosphere near the neutron star surface remains poorly constrained by observations. Indeed, little is known about its emission mechanism, from radio to high-energy X-ray and gamma-rays. Nevertheless, it is believed that large vacuum gaps exist in this magnetosphere, and a non-neutral plasma partially fills the neutron star surroundings to form an electrosphere in differential rotation. Aims: According to several of our previous works, the equatorial disk in this electrosphere is diocotron and magnetron unstable, at least in the linear regime. To better assess the long term evolution of these instabilities, we study the behavior of the non-neutral plasma using particle simulations. Methods: We designed a two-dimensional electrostatic particle-in-cell (PIC) code in cylindrical coordinates, solving Poisson equation for the electric potential. In the diocotron regime, the equation of motion for particles obeys the electric drift approximation. As in the linear study, the plasma is confined between two conducting walls. Moreover, in order to simulate a pair cascade in the gaps, we add a source term feeding the plasma with charged particles having the same sign as those already present in the electrosphere. Results: First we checked our code by looking for the linear development of the diocotron instability in the same regime as the one used in our previous work, for a plasma annulus and for a typical electrosphere with differential rotation. To very good accuracy, we retrieve the same growth rates, supporting the correctness of our PIC code. Next, we consider the long term non-linear evolution of the diocotron instability. We found that particles tend to cluster together to form a small vortex of high charge density rotating around the axis of the cylinder with only little radial excursion of the particles. This grouping of particles generates new low density or even vacuum gaps in the plasma column. Finally, in more general

  15. Evidence of magnetic field switch-off in Particle In Cell simulations of collisionless magnetic reconnection with guide field

    NASA Astrophysics Data System (ADS)

    Innocenti, M. E.; Goldman, M. V.; Newman, D. L.; Markidis, S.; Lapenta, G.

    2015-12-01

    The long term evolution of large domain Particle In Cell simulations of collisionless magnetic reconnection is investigated following observations that show two possible outcomes for collisionless reconnection: towards a Petschek-like configuration (Gosling 2007) or towards multiple X points (Eriksson et al. 2014). In the simulations presented here and described in [Innocenti2015*], a mixed scenario develops. At earlier time, plasmoids are emitted, disrupting the formation of Petschek-like structures. Later, an almost stationary monster plasmoid forms, preventing the emission of other plasmoids. A situation reminding of Petschek's switch-off then ensues. Switch-off is obtained through a slow shock / rotational discontinuity (SS/RD) compound structure, with the rotation discontinuity downstreamthe slow shock. Two external slow shocks located in correspondence of the separatrices reduce the in plane tangential component of the magnetic field, but not to zero. Two transitions reminding of rotational discontinuities in the internal part of the exhausts then perform the final switch-off. Both the slow shocks and the rotational discontinuities are characterized as such through the analysis of their Rankine-Hugoniot jump conditions. A moderate guide field is used to suppress the development of the firehose instability in the exhaust that prevented switch off in [Liu2012]. Compound SS/RD structures, with the RD located downstream the SS, have been observed in both the solar wind and the magnetosphere in Wind and Geotail data respectively [Whang1998, Whang2004]. Ion trajectiories across the SS/RD structure are followed and the kinetic origin of the SS/RD structure is investigated. * Innocenti, Goldman, Newman, Markidis, Lapenta, Evidence of magnetic field switch-off in collisionless magnetic reconnection, accepted in Astrophysical Journal Letters, 2015 Acknowledgements: NERSC, a DOE Office of Science User Facility supported by the Office of Science of the U.S. Department of

  16. Proton velocity ring-driven instabilities in the inner magnetosphere: Linear theory and particle-in-cell simulations

    NASA Astrophysics Data System (ADS)

    Min, Kyungguk; Liu, Kaijun

    2016-01-01

    Linear dispersion theory and electromagnetic particle-in-cell (PIC) simulations are used to investigate linear growth and nonlinear saturation of the proton velocity ring-driven instabilities, namely, ion Bernstein instability and Alfvén-cyclotron instability, which lead to fast magnetosonic waves and electromagnetic ion cyclotron waves in the inner magnetosphere, respectively. The proton velocity distribution is assumed to consist of 10% of a ring distribution and 90% of a low-temperature Maxwellian background. Here two cases with ring speeds vr/vA=1 and 2 (vA is the Alfvén speed) are examined in detail. For the two cases, linear theory predicts that the maximum growth rate γm of the Bernstein instability is 0.16Ωp and 0.19Ωp, respectively, and γm of the Alfvén-cyclotron instability is 0.045Ωp and 0.15Ωp, respectively, where Ωp is the proton cyclotron frequency. Two-dimensional PIC simulations are carried out for the two cases to examine the instability development and the corresponding evolution of the particle distributions. Initially, Bernstein waves develop and saturate with strong electrostatic fluctuations. Subsequently, electromagnetic Alfvén-cyclotron waves grow and saturate. Despite their smaller growth rate, the saturation levels of the Alfvén-cyclotron waves for both cases are larger than those of the Bernstein waves. Resonant interactions with the Bernstein waves lead to scattering of ring protons predominantly along the perpendicular velocity component (toward both decreasing and, at a lesser extent, increasing speeds) without substantial change of either the parallel temperature or the temperature anisotropy. Consequently, the Alfvén-cyclotron instability can still grow. Furthermore, the free energy resulting from the pitch angle scattering by the Alfvén-cyclotron waves is larger than the free energy resulting from the perpendicular energy scattering, thereby leading to the larger saturation level of the Alfvén-cyclotron waves.

  17. PARTICLE DYNAMICS IN THE RECONNECTING HELIOSPHERIC CURRENT SHEET: SOLAR WIND DATA VERSUS THREE-DIMENSIONAL PARTICLE-IN-CELL SIMULATIONS

    SciTech Connect

    Zharkova, Valentina V.; Khabarova, Olga V. E-mail: habarova@izmiran.ru

    2012-06-10

    In this paper, we apply an assumption of the reconnecting heliospheric current sheet (HCS) for explanation of some contradictory results in the experimental detection of the sector boundaries (SBs) from the interplanetary magnetic field and electron pitch-angle measurements. Trajectories, densities, velocity, and pitch-angle distributions of particles accelerated by a super-Dreicer electric field are investigated with 2.5D full kinetic particle-in-cell approach in the HCS assumed to undergo a slow magnetic reconnection process with magnetic field configurations deduced from the solar wind observations. This approach reveals that during motion in a current sheet both kinds of particles, electrons and protons, are to be separated, either fully or partially, with respect to its midplane that can lead to their ejection to the opposite semiplanes that was also observed during the HCS crossings. This separation is found to form Hall's currents and polarization electric field across the current sheet, which distribution over the current sheets allows us to reproduce the magnitudes and temporal profiles of proton and ion velocities measured across the SB (current sheet midplane). This separation process, in turn, divides both kinds of particles on 'transit' and 'bounced' ones depending on a side of the current sheet where they enter it and where they are supposed to be ejected. The transit and bounced protons reproduce rather closely the measured distributions of proton/ion densities about the current sheet midplane with a larger maximum occurring at the heliospheric SB to be formed by the bounced protons and the other two smaller maximums on both sides from the central one to be formed by 'transit' protons. The observed electron distributions of density and energy before and after sector boundary crossings are found to fit the simulated ones for electrons accelerated in a current sheet revealing a sharp increase of density from one side from the HCS boundary and a

  18. Three-dimensional gyrokinetic particle-in-cell simulation of plasmas on a massively parallel computer: Final report on LDRD Core Competency Project, FY 1991--FY 1993

    SciTech Connect

    Byers, J.A.; Williams, T.J.; Cohen, B.I.; Dimits, A.M.

    1994-04-27

    One of the programs of the Magnetic fusion Energy (MFE) Theory and computations Program is studying the anomalous transport of thermal energy across the field lines in the core of a tokamak. We use the method of gyrokinetic particle-in-cell simulation in this study. For this LDRD project we employed massively parallel processing, new algorithms, and new algorithms, and new formal techniques to improve this research. Specifically, we sought to take steps toward: researching experimentally-relevant parameters in our simulations, learning parallel computing to have as a resource for our group, and achieving a 100 {times} speedup over our starting-point Cray2 simulation code`s performance.

  19. Particle-in-cell simulation study of the interaction between a relativistically moving leptonic micro-cloud and ambient electrons

    NASA Astrophysics Data System (ADS)

    Dieckmann, M. E.; Sarri, G.; Markoff, S.; Borghesi, M.; Zepf, M.

    2015-05-01

    Context. The jets of compact accreting objects are composed of electrons and a mixture of positrons and ions. These outflows impinge on the interstellar or intergalactic medium and both plasmas interact via collisionless processes. Filamentation (beam-Weibel) instabilities give rise to the growth of strong electromagnetic fields. These fields thermalize the interpenetrating plasmas. Aims: Hitherto, the effects imposed by a spatial non-uniformity on filamentation instabilities have remained unexplored. We examine the interaction between spatially uniform background electrons and a minuscule cloud of electrons and positrons. The cloud size is comparable to that created in recent laboratory experiments and such clouds may exist close to internal and external shocks of leptonic jets. The purpose of our study is to determine the prevalent instabilities, their ability to generate electromagnetic fields and the mechanism, by which the lepton micro-cloud transfers energy to the background plasma. Methods: A square micro-cloud of equally dense electrons and positrons impinges in our particle-in-cell (PIC) simulation on a spatially uniform plasma at rest. The latter consists of electrons with a temperature of 1 keV and immobile ions. The initially charge- and current neutral micro-cloud has a temperature of 100 keV and a side length of 2.5 plasma skin depths of the micro-cloud. The side length is given in the reference frame of the background plasma. The mean speed of the micro-cloud corresponds to a relativistic factor of 15, which is relevant for laboratory experiments and for relativistic astrophysical outflows. The spatial distributions of the leptons and of the electromagnetic fields are examined at several times. Results: A filamentation instability develops between the magnetic field carried by the micro-cloud and the background electrons. The electromagnetic fields, which grow from noise levels, redistribute the electrons and positrons within the cloud, which boosts

  20. The hierarchical spatial decomposition of three-dimensional particle- in-cell plasma simulations on MIMD distributed memory multiprocessors

    SciTech Connect

    Walker, D.W.

    1992-07-01

    The hierarchical spatial decomposition method is a promising approach to decomposing the particles and computational grid in parallel particle-in-cell application codes, since it is able to maintain approximate dynamic load balance while keeping communication costs low. In this paper we investigate issues in implementing a hierarchical spatial decomposition on a hypercube multiprocessor. Particular attention is focused on the communication needed to update guard ring data, and on the load balancing method. The hierarchical approach is compared with other dynamic load balancing schemes.

  1. Verification of high performance two-dimensional particle-in-cell simulations of low-temperature plasmas

    NASA Astrophysics Data System (ADS)

    Leggate, Huw; Turner, Miles

    2016-09-01

    We discuss a two-dimensional implementation of the particle-in-cell algorithm with Monte Carlo collisions. This implementation is designed for multiprocessor environments in which each processor is assumed to offer vector capabilities and multiple execution threads. An appropriate implementation therefore combines OpenMP to exploit multithreading with MPI to coupled computing nodes. This approach promises to achieve accelerations of a least a factor of several hundred, relative to to a simple serial implementation. However, the complexity involved also offers many opportunities for error, and makes correctness demonstrations especially desirable. In this presentation we discuss the characteristics of this parallel implementation, and we describe a suite of verification tests that collectively create a strong presumption that the code is correct. Work supported by the EUROfusion consortium.

  2. Development of the 3D Parallel Particle-In-Cell Code IMPACT to Simulate the Ion Beam Transport System of VENUS (Abstract)

    SciTech Connect

    Qiang, J.; Leitner, D.; Todd, D.S.; Ryne, R.D.

    2005-03-15

    The superconducting ECR ion source VENUS serves as the prototype injector ion source for the Rare Isotope Accelerator (RIA) driver linac. The RIA driver linac requires a great variety of high charge state ion beams with up to an order of magnitude higher intensity than currently achievable with conventional ECR ion sources. In order to design the beam line optics of the low energy beam line for the RIA front end for the wide parameter range required for the RIA driver accelerator, reliable simulations of the ion beam extraction from the ECR ion source through the ion mass analyzing system are essential. The RIA low energy beam transport line must be able to transport intense beams (up to 10 mA) of light and heavy ions at 30 keV.For this purpose, LBNL is developing the parallel 3D particle-in-cell code IMPACT to simulate the ion beam transport from the ECR extraction aperture through the analyzing section of the low energy transport system. IMPACT, a parallel, particle-in-cell code, is currently used to model the superconducting RF linac section of RIA and is being modified in order to simulate DC beams from the ECR ion source extraction. By using the high performance of parallel supercomputing we will be able to account consistently for the changing space charge in the extraction region and the analyzing section. A progress report and early results in the modeling of the VENUS source will be presented.

  3. Development of the 3D Parallel Particle-In-Cell Code IMPACT to Simulate the Ion Beam Transport System of VENUS (Abstract)

    NASA Astrophysics Data System (ADS)

    Qiang, J.; Leitner, D.; Todd, D. S.; Ryne, R. D.

    2005-03-01

    The superconducting ECR ion source VENUS serves as the prototype injector ion source for the Rare Isotope Accelerator (RIA) driver linac. The RIA driver linac requires a great variety of high charge state ion beams with up to an order of magnitude higher intensity than currently achievable with conventional ECR ion sources. In order to design the beam line optics of the low energy beam line for the RIA front end for the wide parameter range required for the RIA driver accelerator, reliable simulations of the ion beam extraction from the ECR ion source through the ion mass analyzing system are essential. The RIA low energy beam transport line must be able to transport intense beams (up to 10 mA) of light and heavy ions at 30 keV. For this purpose, LBNL is developing the parallel 3D particle-in-cell code IMPACT to simulate the ion beam transport from the ECR extraction aperture through the analyzing section of the low energy transport system. IMPACT, a parallel, particle-in-cell code, is currently used to model the superconducting RF linac section of RIA and is being modified in order to simulate DC beams from the ECR ion source extraction. By using the high performance of parallel supercomputing we will be able to account consistently for the changing space charge in the extraction region and the analyzing section. A progress report and early results in the modeling of the VENUS source will be presented.

  4. Monte Carlo approach to calculate proton stopping in warm dense matter within particle-in-cell simulations

    NASA Astrophysics Data System (ADS)

    Wu, D.; He, X. T.; Yu, W.; Fritzsche, S.

    2017-02-01

    A Monte Carlo approach to proton stopping in warm dense matter is implemented into an existing particle-in-cell code. This approach is based on multiple electron-electron, electron-ion, and ion-ion binary collision and accounts for both the free and the bound electrons in the plasmas. This approach enables one to calculate the stopping of particles in a more natural manner than existing theoretical treatment. In the low-temperature limit, when "all" electrons are bound to the nucleus, the stopping power coincides with the predictions from the Bethe-Bloch formula and is consistent with the data from the National Institute of Standard and Technology database. At higher temperatures, some of the bound electrons are ionized, and this increases the stopping power in the plasmas, as demonstrated by A. B. Zylstra et al. [Phys. Rev. Lett. 114, 215002 (2015)], 10.1103/PhysRevLett.114.215002. At even higher temperatures, the degree of ionization reaches a maximum and thus decreases the stopping power due to the suppression of collision frequency between projected proton beam and hot plasmas in the target.

  5. Particle-in-cell simulation for frequency up-conversion of microwave pulse in a rapidly created plasma

    NASA Astrophysics Data System (ADS)

    Chen, Kun; Liu, Chunliang; Gao, Mingzhu; Chang, Chao

    2017-03-01

    Microwave pulse propagation through a rapidly created plasma and frequency up-conversion has been demonstrated by the particle-in-cell (PIC) method. Compared with the finite-difference time-domain method in which the time-varying plasma is simplified as a dielectric medium, the PIC method considering the interaction and motion of charged particles would be much closer to the experimental values. It is found that the source wave amplitude has a stable range to obtain the stable output. If the source wave amplitude is below 103 V/m with the plasma density of 4 ×1019m-3 , the output is mainly the plasma noise. Moreover, the higher amplitude source wave beyond 108 V/m would break the spatial distribution of the plasma so as to have an influence on the conversion efficiency. The stable range of source wave amplitude is affected by the plasma density. The power loss will increase with the increase in the plasma density in the PIC method, and it is more convenient and accurate to discuss the effects of the collision frequency.

  6. Particle-in-cell simulation of electron trajectories and irradiation uniformity in an annular cathode high current pulsed electron beam source

    NASA Astrophysics Data System (ADS)

    Jiang, Wei; Wang, Langping; Zhou, Guangxue; Wang, Xiaofeng

    2017-02-01

    In order to study electron trajectories in an annular cathode high current pulsed electron beam (HCPEB) source based on carbon fiber bunches, the transmission process of electrons emitted from the annular cathode was simulated using a particle-in-cell model with Monte Carlo collisions (PIC-MCC). The simulation results show that the intense flow of the electrons emitted from the annular cathode are expanded during the transmission process, and the uniformity of the electron distribution is improved in the transportation process. The irradiation current decreases with the irradiation distance and the pressure, and increases with the negative voltage. In addition, when the irradiation distance and the cathode voltage are larger than 40 mm and -15 kV, respectively, a uniform irradiation current distribution along the circumference of the anode can be obtained. The simulation results show that good irradiation uniformity of circular components can be achieved by this annular cathode HCPEB source.

  7. A Fokker-Planck-Landau collision equation solver on two-dimensional velocity grid and its application to particle-in-cell simulation

    SciTech Connect

    Yoon, E. S.; Chang, C. S.

    2014-03-15

    An approximate two-dimensional solver of the nonlinear Fokker-Planck-Landau collision operator has been developed using the assumption that the particle probability distribution function is independent of gyroangle in the limit of strong magnetic field. The isotropic one-dimensional scheme developed for nonlinear Fokker-Planck-Landau equation by Buet and Cordier [J. Comput. Phys. 179, 43 (2002)] and for linear Fokker-Planck-Landau equation by Chang and Cooper [J. Comput. Phys. 6, 1 (1970)] have been modified and extended to two-dimensional nonlinear equation. In addition, a method is suggested to apply the new velocity-grid based collision solver to Lagrangian particle-in-cell simulation by adjusting the weights of marker particles and is applied to a five dimensional particle-in-cell code to calculate the neoclassical ion thermal conductivity in a tokamak plasma. Error verifications show practical aspects of the present scheme for both grid-based and particle-based kinetic codes.

  8. Particle-in-Cell Simulations of Nonlinear Laser-Plasma Interactions and Hot-Electron Generations in the Shock-Ignition Regime

    NASA Astrophysics Data System (ADS)

    Yan, R.; Borwick, E.; Betti, R.; Li, J.; Theobald, W.; Ren, C.; Krauland, C.; Wei, M. S.; Zhang, S.; Beg, F. N.

    2016-10-01

    We performed particle-in-cell (PIC) simulations with parameters relevant to laser-plasma interaction (LPI) experiments on OMEGA EP using high laser intensities (1016 to 1017 W /cm2). Rich physics were observed in this new LPI regime, including laser filamentation and plasma cavitation, plasma waves beyond the Landau cutoff, and significant pump depletion. We will also compare hot-electron generation from the simulations with the experimental measurements. This material is based upon work supported by the Department of Energy under Grant No. DE-SC0012316; by NSF under Grant No. PHY-1314734; and by Laboratory for Laser Energetics. The research used resources of the National Energy Research Scientific Computing Center.

  9. Canonical symplectic particle-in-cell method for long-term large-scale simulations of the Vlasov–Maxwell equations

    SciTech Connect

    Qin, Hong; Liu, Jian; Xiao, Jianyuan; Zhang, Ruili; He, Yang; Wang, Yulei; Sun, Yajuan; Burby, Joshua W.; Ellison, Leland; Zhou, Yao

    2015-12-14

    Particle-in-cell (PIC) simulation is the most important numerical tool in plasma physics. However, its long-term accuracy has not been established. To overcome this difficulty, we developed a canonical symplectic PIC method for the Vlasov-Maxwell system by discretising its canonical Poisson bracket. A fast local algorithm to solve the symplectic implicit time advance is discovered without root searching or global matrix inversion, enabling applications of the proposed method to very large-scale plasma simulations with many, e.g. 10(9), degrees of freedom. The long-term accuracy and fidelity of the algorithm enables us to numerically confirm Mouhot and Villani's theory and conjecture on nonlinear Landau damping over several orders of magnitude using the PIC method, and to calculate the nonlinear evolution of the reflectivity during the mode conversion process from extraordinary waves to Bernstein waves.

  10. Particle-in-cell simulation for parametric decays of a circularly polarized Alfvén wave in relativistic thermal electron-positron plasma

    SciTech Connect

    López, Rodrigo A. Muñoz, Víctor; Viñas, Adolfo F.; Alejandro Valdivia, J.

    2014-03-15

    Parametric decays of a left-handed circularly polarized Alfvén wave propagating along a constant background magnetic field in a relativistic thermal electron-positron plasma are studied by means of a one dimensional relativistic particle-in-cell simulation. Relativistic effects are included in the Lorentz equation for the momentum of the particles and in their thermal motion, by considering a Maxwell-Jüttner velocity distribution function for the initial condition. In the linear stage of the simulation, we find many instabilities that match the predictions of relativistic fluid theory. In general, the growth rates of the instabilities increase as the pump wave amplitude is increased, and decrease with a raise in the plasma temperatures. We have confirmed that for very high temperatures the Alfvén branch is suppressed, consistent with analytical calculations.

  11. Wave-particle interactions with parallel whistler waves: Nonlinear and time-dependent effects revealed by particle-in-cell simulations

    SciTech Connect

    Camporeale, Enrico; Zimbardo, Gaetano

    2015-09-15

    We present a self-consistent Particle-in-Cell simulation of the resonant interactions between anisotropic energetic electrons and a population of whistler waves, with parameters relevant to the Earth's radiation belt. By tracking PIC particles and comparing with test-particle simulations, we emphasize the importance of including nonlinear effects and time evolution in the modeling of wave-particle interactions, which are excluded in the resonant limit of quasi-linear theory routinely used in radiation belt studies. In particular, we show that pitch angle diffusion is enhanced during the linear growth phase, and it rapidly saturates well before a single bounce period. This calls into question the widely used bounce average performed in most radiation belt diffusion calculations. Furthermore, we discuss how the saturation is related to the fact that the domain in which the particles pitch angle diffuses is bounded, and to the well-known problem of 90° diffusion barrier.

  12. Particle-In-Cell/Monte Carlo Simulation of Ion Back BomBardment in a High Average Current RF Photo-Gun

    SciTech Connect

    Qiang, J.

    2009-10-17

    In this paper, we report on study of ion back bombardment in a high average current radio-frequency (RF) photo-gun using a particle-in-cell/Monte Carlo simulation method. Using this method, we systematically studied effects of gas pressure, RF frequency, RF initial phase, electric field profile, magnetic field, laser repetition rate, different ion species on ion particle line density distribution, kinetic energy spectrum, and ion power line density distribution back bombardment onto the photocathode. Those simulation results suggested that effects of ion back bombardment could increase linearly with the background gas pressure and laser repetition rate. The RF frequency has significantly affected the ion motion inside the gun so that the ion power deposition on the photocathode in an RF gun can be several orders of magnitude lower than that in a DC gun. The ion back bombardment can be minimized by appropriately choosing the electric field profile and the initial phase.

  13. Canonical symplectic particle-in-cell method for long-term large-scale simulations of the Vlasov-Maxwell equations

    NASA Astrophysics Data System (ADS)

    Qin, Hong; Liu, Jian; Xiao, Jianyuan; Zhang, Ruili; He, Yang; Wang, Yulei; Sun, Yajuan; Burby, Joshua W.; Ellison, Leland; Zhou, Yao

    2016-01-01

    Particle-in-cell (PIC) simulation is the most important numerical tool in plasma physics. However, its long-term accuracy has not been established. To overcome this difficulty, we developed a canonical symplectic PIC method for the Vlasov-Maxwell system by discretising its canonical Poisson bracket. A fast local algorithm to solve the symplectic implicit time advance is discovered without root searching or global matrix inversion, enabling applications of the proposed method to very large-scale plasma simulations with many, e.g. 109, degrees of freedom. The long-term accuracy and fidelity of the algorithm enables us to numerically confirm Mouhot and Villani’s theory and conjecture on nonlinear Landau damping over several orders of magnitude using the PIC method, and to calculate the nonlinear evolution of the reflectivity during the mode conversion process from extraordinary waves to Bernstein waves.

  14. Generation of Multiband Chorus in the Earth's Magnetosphere: 1-D PIC Simulation

    NASA Astrophysics Data System (ADS)

    Gao, Xinliang; Ke, Yangguang; Lu, Quanming; Chen, Lunjin; Wang, Shui

    2017-01-01

    Multiband chorus waves, where the frequency of upper band chorus is about twice that of lower band chorus, have recently been reported based on THEMIS observations. The generation of multiband chorus waves is attributed to the mechanism of lower band cascade, where upper band chorus is excited via the nonlinear coupling process between lower band chorus and the associated density mode with the frequency equal to that of lower band chorus. In this letter, with a one-dimensional (1-D) particle-in-cell (PIC) simulation model, we have successfully reproduced multiband chorus waves. During the simulation, the significant density fluctuation is driven by the fluctuating electric field along the wave vector of the pump wave (lower band chorus), which can be directly observed in this self-consistent plasma system. Then, the second harmonic of the pump whistler-mode wave (upper band chorus) is generated. After quantitatively analyzing resonant conditions among wave numbers, we can confirm that the generation is caused due to the coupling between the pump wave and the density fluctuation along its wave vector. The third harmonic can also be excited through lower band cascade if the pump whistler-mode wave has a sufficiently large amplitude. Our simulation results not only provide a theoretical support to the mechanism of lower band cascade to generate multiband chorus but also propose a new pattern of evolution for whistler-mode waves in the Earth's magnetosphere.

  15. Simulations of atmospheric pressure discharge in a high-voltage nanosecond pulse using the particle-in-cell Monte Carlo collision model in noble gases

    NASA Astrophysics Data System (ADS)

    Shi, Feng; Wang, Dezhen; Ren, Chunsheng

    2008-06-01

    Atmospheric pressure discharge nonequilibrium plasmas have been applied to plasma processing with modern technology. Simulations of discharge in pure Ar and pure He gases at one atmospheric pressure by a high voltage trapezoidal nanosecond pulse have been performed using a one-dimensional particle-in-cell Monte Carlo collision (PIC-MCC) model coupled with a renormalization and weighting procedure (mapping algorithm). Numerical results show that the characteristics of discharge in both inert gases are very similar. There exist the effects of local reverse field and double-peak distributions of charged particles' density. The electron and ion energy distribution functions are also observed, and the discharge is concluded in the view of ionization avalanche in number. Furthermore, the independence of total current density is a function of time, but not of position.

  16. The study of the Poincare-Lighthill-Kuo method by using the particle-in-cell simulation method in a dusty plasma

    SciTech Connect

    Zhang, Jie; Yang, Yang; Xu, Yan-Xia; Qi, Xin E-mail: duanws@nwnu.edu.cn; Duan, Wen-shan E-mail: duanws@nwnu.edu.cn; Yang, Lei

    2014-10-15

    The application scope of the Poincare-Lighthill-Kuo (PLK) method is suggested by using the Particle-in-cell (PIC) numerical method to study head-on collision of two solitary waves. Comparisons between the numerical results from PIC simulations and the analytical ones from the PLK method indicate that the both are in good agreement with each other. The dependence of the phase shifts after the head-on collision on both amplitudes of two solitary waves is given from our PIC method. It is found that the phase shifts depended on the amplitude of both waves. The maximum amplitude during the colliding process is approximately equal to the sum of both amplitudes for the small amplitude solitary waves.

  17. Comparison of particle-in-cell simulation with experiment for the transport system of the superconducting electron cyclotron resonance ion source VENUS

    SciTech Connect

    Todd, D.S.; Leitner, D.; Leitner, M.; Lyneis, C.M.; Qiang, J.; Grote, D.P.

    2006-03-15

    The three-dimensional, particle-in-cell code WARP has been enhanced to allow end-to-end beam dynamics simulations of the VENUS beam transport system from the extraction region, through a mass-analyzing magnet, and up to a two-axis emittance scanner. This article presents the first results of comparisons between the simulation and experimental data. A helium beam (He{sup +} and He{sup 2+}) is chosen as an initial comparison beam due to its simple mass spectrum. Although a number of simplifications are made for the initial extracted beam, aberration characteristics appear in simulations that are also present in experimental phase-space current-density measurements. Further, measurements of phase-space tilt indicate that simulations must have little or no space-charge neutralization along the transport system to best agree with experiment. In addition, recent measurements of triangular beam structure immediately after the source are presented. This beam structure is related to the source magnetic confinement fields and will need to be taken into account as the initial beam approximations are lifted.

  18. Particle-in-cell Simulations of Particle Energization via Shock Drift Acceleration from Low Mach Number Quasi-perpendicular Shocks in Solar Flares

    NASA Astrophysics Data System (ADS)

    Park, Jaehong; Ren, Chuang; Workman, Jared C.; Blackman, Eric G.

    2013-03-01

    Low Mach number, high beta fast mode shocks can occur in the magnetic reconnection outflows of solar flares. These shocks, which occur above flare loop tops, may provide the electron energization responsible for some of the observed hard X-rays and contemporaneous radio emission. Here we present new two-dimensional particle-in-cell simulations of low Mach number/high beta quasi-perpendicular shocks. The simulations show that electrons above a certain energy threshold experience shock-drift-acceleration. The transition energy between the thermal and non-thermal spectrum and the spectral index from the simulations are consistent with some of the X-ray spectra from RHESSI in the energy regime of E <~ 40 ~ 100 keV. Plasma instabilities associated with the shock structure such as the modified-two-stream and the electron whistler instabilities are identified using numerical solutions of the kinetic dispersion relations. We also show that the results from PIC simulations with reduced ion/electron mass ratio can be scaled to those with the realistic mass ratio.

  19. Particle-In-Cell Simulations of Particle Energization from Low Mach Number Fast Mode Shocks Using the Moving Wall Boundary Condition

    NASA Astrophysics Data System (ADS)

    Workman, Jared C.; Park, J.; Blackman, E.; Ren, C.; Siller, R.

    2012-05-01

    Astrophysical shocks are often studied in the high Mach number limit but weakly compressive fast shocks can occur in magnetic reconnection outflows and are considered to be a site of particle energization in solar flares. Here we study the microphysics of such perpendicular, low Mach number collisionless shocks using two-dimensional particle-in-cell (PIC) simulations with a reduced ion/electron mass ratio and employ a moving wall boundary method for initial generation the shock. This moving wall method allows for more control of the shock speed, smaller simulation box sizes, and longer simulation times than the commonly used fixed wall, reflection method of shock formation. Our results, which are independent of the shock formation method, reveal the prevalence shock drift acceleration (SDA) of both electron and ions in a purely perpendicular shock with Alfven Mach number MA = 6.8 and ratio of thermal to magnetic pressure β = 8. We determine the respective minimum energies required for electrons and ions to incur SDA. We derive an theoretical electron distribution via SDA that compares favorably to the simulation results. We also show that a modified two-stream instability due to the incoming and reflecting ions in the shock transition region acts as the mechanism to generate collisionless plasma turbulence that sustains the shock.

  20. An explicit large time step particle-in-cell scheme for nonlinear gyrokinetic simulations in the electromagnetic regime

    NASA Astrophysics Data System (ADS)

    Kleiber, R.; Hatzky, R.; Könies, A.; Mishchenko, A.; Sonnendrücker, E.

    2016-03-01

    A new algorithm for electromagnetic gyrokinetic simulations, the so called "pullback transformation scheme" proposed by Mishchenko et al. [Phys. Plasmas 21, 092110 (2014)] is motivated as an explicit time integrator reset after each full timestep and investigated in detail. Using a numerical dispersion relation valid in slab geometry, it is shown that the linear properties of the scheme are comparable to those of an implicit v∥ -scheme. A nonlinear extension of the mixed variable formulation, derived consistently from a field Lagrangian, is proposed. The scheme shows excellent numerical properties with a low statistical noise level and a large time step especially for MHD modes. The example of a nonlinear slab tearing mode simulation is used to illustrate the properties of different formulations of the physical model equations.

  1. Development of a fully implicit particle-in-cell scheme for gyrokinetic electromagnetic turbulence simulation in XGC1

    NASA Astrophysics Data System (ADS)

    Ku, Seung-Hoe; Hager, R.; Chang, C. S.; Chacon, L.; Chen, G.; EPSI Team

    2016-10-01

    The cancelation problem has been a long-standing issue for long wavelengths modes in electromagnetic gyrokinetic PIC simulations in toroidal geometry. As an attempt of resolving this issue, we implemented a fully implicit time integration scheme in the full-f, gyrokinetic PIC code XGC1. The new scheme - based on the implicit Vlasov-Darwin PIC algorithm by G. Chen and L. Chacon - can potentially resolve cancelation problem. The time advance for the field and the particle equations is space-time-centered, with particle sub-cycling. The resulting system of equations is solved by a Picard iteration solver with fixed-point accelerator. The algorithm is implemented in the parallel velocity formalism instead of the canonical parallel momentum formalism. XGC1 specializes in simulating the tokamak edge plasma with magnetic separatrix geometry. A fully implicit scheme could be a way to accurate and efficient gyrokinetic simulations. We will test if this numerical scheme overcomes the cancelation problem, and reproduces the dispersion relation of Alfven waves and tearing modes in cylindrical geometry. Funded by US DOE FES and ASCR, and computing resources provided by OLCF through ALCC.

  2. A 3D immersed finite element method with non-homogeneous interface flux jump for applications in particle-in-cell simulations of plasma-lunar surface interactions

    NASA Astrophysics Data System (ADS)

    Han, Daoru; Wang, Pu; He, Xiaoming; Lin, Tao; Wang, Joseph

    2016-09-01

    Motivated by the need to handle complex boundary conditions efficiently and accurately in particle-in-cell (PIC) simulations, this paper presents a three-dimensional (3D) linear immersed finite element (IFE) method with non-homogeneous flux jump conditions for solving electrostatic field involving complex boundary conditions using structured meshes independent of the interface. This method treats an object boundary as part of the simulation domain and solves the electric field at the boundary as an interface problem. In order to resolve charging on a dielectric surface, a new 3D linear IFE basis function is designed for each interface element to capture the electric field jump on the interface. Numerical experiments are provided to demonstrate the optimal convergence rates in L2 and H1 norms of the IFE solution. This new IFE method is integrated into a PIC method for simulations involving charging of a complex dielectric surface in a plasma. A numerical study of plasma-surface interactions at the lunar terminator is presented to demonstrate the applicability of the new method.

  3. 2D particle-in-cell simulations of the electron drift instability and associated anomalous electron transport in Hall-effect thrusters

    NASA Astrophysics Data System (ADS)

    Croes, Vivien; Lafleur, Trevor; Bonaventura, Zdeněk; Bourdon, Anne; Chabert, Pascal

    2017-03-01

    In this work we study the electron drift instability in Hall-effect thrusters (HETs) using a 2D electrostatic particle-in-cell (PIC) simulation. The simulation is configured with a Cartesian coordinate system modeling the radial-azimuthal (r{--}θ ) plane for large radius thrusters. A magnetic field, {{B}}0, is aligned along the Oy axis (r direction), a constant applied electric field, {{E}}0, along the Oz axis (perpendicular to the simulation plane), and the {{E}}0× {{B}}0 direction is along the Ox axis (θ direction). Although electron transport can be well described by electron–neutral collisions for low plasma densities, at high densities (similar to those in typical HETs), a strong instability is observed that enhances the electron cross-field mobility; even in the absence of electron–neutral collisions. The instability generates high frequency (of the order of MHz) and short wavelength (of the order of mm) fluctuations in both the azimuthal electric field and charged particle densities, and propagates in the {{E}}0× {{B}}0 direction with a velocity close to the ion sound speed. The correlation between the electric field and density fluctuations (which leads to an enhanced electron–ion friction force) is investigated and shown to be directly responsible for the increased electron transport. Results are compared with a recent kinetic theory, showing good agreement with the instability properties and electron transport.

  4. Appropriate use of the particle-in-cell method in low temperature plasmas: Application to the simulation of negative ion extraction

    NASA Astrophysics Data System (ADS)

    Garrigues, L.; Fubiani, G.; Boeuf, J. P.

    2016-12-01

    The Particle-In-Cell Monte Carlo Collision (PIC MCC) method has been used by different authors in the last ten years to describe negative ion extraction in the context of neutral beam injection for fusion. Questionable results on the intensity and profile of the extracted negative ion beamlets have been presented in several recently published papers. Using a standard explicit PIC MCC method, we show that these results are due to a non-compliance with the constraints of the numerical method (grid spacing, number of particles per cell) and to a non-physical generation of the simulated plasma. We discuss in detail the conditions of mesh convergence and plasma generation and show that the results can significantly deviate from the correct solution and lead to unphysical features when the constraints inherent to the method are not strictly fulfilled. This paper illustrates the importance of verification in any plasma simulation. Since the results presented in this paper have been obtained with careful verification of the method, we propose them as benchmarks for future comparisons between different simulation codes for negative ion extraction.

  5. Full particle-in-cell simulations of kinetic equilibria and the role of the initial current sheet on steady asymmetric magnetic reconnection

    NASA Astrophysics Data System (ADS)

    Dargent, J.; Aunai, N.; Belmont, G.; Dorville, N.; Lavraud, B.; Hesse, M.

    2016-06-01

    > Tangential current sheets are ubiquitous in space plasmas and yet hard to describe with a kinetic equilibrium. In this paper, we use a semi-analytical model, the BAS model, which provides a steady ion distribution function for a tangential asymmetric current sheet and we prove that an ion kinetic equilibrium produced by this model remains steady in a fully kinetic particle-in-cell simulation even if the electron distribution function does not satisfy the time independent Vlasov equation. We then apply this equilibrium to look at the dependence of magnetic reconnection simulations on their initial conditions. We show that, as the current sheet evolves from a symmetric to an asymmetric upstream plasma, the reconnection rate is impacted and the X line and the electron flow stagnation point separate from one another and start to drift. For the simulated systems, we investigate the overall evolution of the reconnection process via the classical signatures discussed in the literature and searched in the Magnetospheric MultiScale data. We show that they seem robust and do not depend on the specific details of the internal structure of the initial current sheet.

  6. Particle-in-cell Simulations of Electromagnetic Wave Scattering From Numerically Generated Flute-type Density Irregularities

    NASA Astrophysics Data System (ADS)

    Main, D. S.; Caplinger, J.; Kim, T. C.; Sotnikov, V. I.

    2014-12-01

    The propagation of electromagnetic (EM) waves can be influenced by the presence of plasma turbulence. It is known that Flute-type density irregularities can develop during the nonlinear stage of an interchange instability in Earth's ionosphere and can affect radio communication channels. These density structures play an important role in the refraction and scattering of EM waves in Earth's ionosphere and also in laser diagnostic scattering experiments. To generate Flute-type density irregularities, we will use previously obtained numerical solution of nonlinear fluid equations involving the electrostatic potential and density. The solutions to these fluid equations govern the development of an interchange instability and results in the spatial dependence of density irregularities which can be used to analyze scattering of high frequency EM waves. This solution contains both large scale vortex density structures coexisting with short scale density perturbations. Next we will initialize a PIC simulation with the density structure from the fluid simulation to calculate the scattering cross-section and compare the results with an analytic solution obtained using numerically calculated density spectra. Because the linear and non-linear stages are well separated in time, we will compare the effect of scattering from density irregularities which form in both the linear and non-linear stages.

  7. First Observation of Switch-Off Slow Shocks in Fully Kinetic Particle in Cell Simulation of Magnetic Reconnection

    NASA Astrophysics Data System (ADS)

    Lapenta, G.; Sanna, L.; Goldman, M. V.; Newman, D. L.; Markidis, S.

    2014-12-01

    A perduring challenge in the study of reconnection it has long been the failing attempts to reconcile the large scale MHD view based on the Petschek model with the small scale view based on kinetic theory. The first is based on the existence of standing switch off slow shocks (SSS) that eliminate the horizontal (the x component in the usual GSM coordinates) reconnecting magnetic field component forming vertical magnetic field lines. The second is based on nested diffusion regions where the magnetic field lines become decoupled first from ions and then from electrons. The kinetic picture when observed superficially does seem to have seem resemblance to the Petschek topology, despite the nested boxes being more of a Sweet-Parker concept. Nevertheless, the question has always been: if expanded to sufficiently large scales, does the kinetic description eventually lead tot the formation os SSS? The question remains answered. Recently a first negative answer has been proposed in Ref. [1]. The proposed answer is in essence that SSS are made impossible by the presence of a firehose instability in the reconnection exhaust and by the formation of a plateau in the firehose parameter at a value of 0.25 corresponding to the condition where nonlinear slow and intermediate wave become degenerate. We report a new series of simulations where we demonstrate that this is not the case in general. While for the specific case used in Ref [1], we indeed re-obtain the same conclusions reached by the authors. But our study demonstrates that case to be very peculiar and not representative of the more general kinetic answer. We will report direct evidence of the presence of extended SSS (over regions of hundreds of ion inertial lengths) in fully kinetic simulations for parameters typical of the magntotail and of the solar wind. Our results indicate that SSS are the natural extension of kinetic reconnection to large scales. The simulations required for the study are heroic and were conducted

  8. Young gamma-ray pulsar: from modeling the gamma-ray emission to the particle-in-cell simulations of the global magnetosphere

    NASA Astrophysics Data System (ADS)

    Brambilla, Gabriele; Kalapotharakos, Constantions; Timokhin, Andrey; Kust Harding, Alice; Kazanas, Demosthenes

    2016-04-01

    Accelerated charged particles flowing in the magnetosphere produce pulsar gamma-ray emission. Pair creation processes produce an electron-positron plasma that populates the magnetosphere, in which the plasma is very close to force-free. However, it is unknown how and where the plasma departs from the ideal force-free condition, which consequently inhibits the understanding of the emission generation. We found that a dissipative magnetosphere outside the light cylinder effectively reproduces many aspects of the young gamma-ray pulsar emission as seen by the Fermi Gamma-ray Space Telescope, and through particle-in-cell simulations (PIC), we started explaining this configuration self-consistently. These findings show that, together, a magnetic field structure close to force-free and the assumption of gamma-ray curvature radiation as the emission mechanism are strongly compatible with the observations. Two main issues from the previously used models that our work addresses are the inability to explain luminosity, spectra, and light curve features at the same time and the inconsistency of the electrodynamics. Moreover, using the PIC simulations, we explore the effects of different pair multiplicities on the magnetosphere configurations and the locations of the accelerating regions. Our work aims for a self-consistent modeling of the magnetosphere, connecting the microphysics of the pair-plasma to the global magnetosphere macroscopic quantities. This direction will lead to a greater understanding of pulsar emission at all wavelengths, as well as to concrete insights into the physics of the magnetosphere.

  9. Investigation of the operating characteristics of a 12 stepped-cavity relativistic magnetron with axial extraction driven by an "F" transparent cathode using particle-in-cell simulations

    NASA Astrophysics Data System (ADS)

    Liu, M.; Schamiloglu, E.; Jiang, W.; Fuks, M.; Liu, C.

    2016-11-01

    We explore the performance of a 12 stepped-cavity relativistic magnetron with axial extraction (12 stepped-cavity RMDO) driven by an "F" transparent cathode (the "F" transparent cathode is a coaxial transparent cathode with two azimuthal periods of increased thickness and which looks like the letter "F," so we call it "F" transparent cathode) through particle-in-cell (PIC) simulations. It is shown that using the "F" transparent cathode, an electronic efficiency of 70% with gigawatt output power is obtained while reducing the axial leakage current by about 50% compared to using the usual transparent cathode. Further PIC simulations demonstrate that frequency bifurcation occurs and mode switching can be achieved using several hundred kilowatts input RF power in the 12 stepped-cavity RMDO driven by an "F" transparent cathode. For example, it was found that using an applied driver power of 180 kW for 10 ns, the operating TE31 mode can be switched to the TE41 mode. It is also found that the secondary electron and backscattered electron emission and axial leakage current were two disturbing factors for the 12 stepped-cavity RMDO when it works at a stable operation mode but when the 12 stepped-cavity RMDO works near the critical magnetic field at the boundary between two modes, these two factors would lead to the operation modes changing.

  10. A parametric study for the generation of ion Bernstein modes from a discrete spectrum to a continuous one in the inner magnetosphere. II. Particle-in-cell simulations

    NASA Astrophysics Data System (ADS)

    Sun, Jicheng; Gao, Xinliang; Lu, Quanming; Chen, Lunjin; Tao, Xin; Wang, Shui

    2016-02-01

    In this paper, we perform one-dimensional particle-in-cell simulations to investigate the properties of perpendicular magnetosonic waves in a plasma system consisting of three components: cool electrons, cool protons, and tenuous ring distribution protons, where the waves are excited by the tenuous proton ring distribution. Consistent with the linear theory, the spectra of excited magnetosonic waves can change from discrete to continuous due to the overlapping of adjacent unstable wave modes. The increase of the proton to electron mass ratio, the ratio of the light speed to the Alfven speed, or the concentration of protons with a ring distribution tends to result in a continuous spectrum of magnetosonic waves, while the increase of the ring velocity of the tenuous proton ring distribution leads to a broader one, but with a discrete structure. Moreover, the energization of both cool electrons and protons and the scattering of ring distribution protons due to the excited magnetosonic waves are also observed in our simulations, which cannot be predicted by the linear theory. Besides, a thermalized proton ring distribution may lead to the further excitation of several lower discrete harmonics with their frequencies about several proton gyrofrequencies.

  11. Development of the Plasma Thruster Particle-in-Cell Simulator to Complement Empirical Studies of a Low-Power Cusped-Field Thruster

    NASA Astrophysics Data System (ADS)

    Gildea, Stephen Robert

    Cusped-field plasma thrusters are an electric propulsion concept being investigated by several laboratories in the United States and Europe. This technology was implemented as a low-power prototype in 2007 to ascertain if durability and performance improvements over comparable Hall thruster designs could be provided by the distinct magnetic topologies inherent to these devices. The first device tested at low-powers was eventually designated the "diverging cusped-field thruster" (DCFT) and demonstrated performance capabilities similar to state-of-the-art Hall thrusters. The research presented herein is a continuation of these initial studies, geared toward identifying significant operational characteristics of the thruster using experiments and numerical simulations. After a review of hybrid, fluid, and particle-in-cell Hall thruster models, experimental contributions from this work are presented. Anode current waveform measurements provide the first evidence of the distinct time-dependent characteristics of the two main modes of DCFT operation. The previously named "high-current" mode exhibits oscillation amplitudes several factors larger than mean current values, while magnitudes in "low-current" mode are at least a full order smaller. Results from a long-duration test, exceeding 200 hours of high-current mode operation, demonstrate lifetime-limiting erosion rates about 50% lower than those observed in comparable Hall thrusters. Concurrently, the plasma thruster particle-in-cell (PTpic) simulator was developed by upgrading numerous aspects of a preexisting Hall thruster model. Improvements in performance and accuracy have been achieved through modifications of the particle moving and electrostatic potential solving algorithms. Data from simulations representing both modes of operation are presented. In both cases, despite being unable to predict the correct location of the main potential drop in the thruster chamber, the model successfully reproduces the hollow

  12. Evolution of metastable state molecules N2(A3 Σu+) in a nanosecond pulsed discharge: A particle-in-cell/Monte Carlo collisions simulation

    NASA Astrophysics Data System (ADS)

    Gao, Liang; Sun, Jizhong; Feng, Chunlei; Bai, Jing; Ding, Hongbin

    2012-01-01

    A particle-in-cell plus Monte Carlo collisions method has been employed to investigate the nitrogen discharge driven by a nanosecond pulse power source. To assess whether the production of the metastable state N2(A3 Σu+) can be efficiently enhanced in a nanosecond pulsed discharge, the evolutions of metastable state N2(A3 Σu+) density and electron energy distribution function have been examined in detail. The simulation results indicate that the ultra short pulse can modulate the electron energy effectively: during the early pulse-on time, high energy electrons give rise to quick electron avalanche and rapid growth of the metastable state N2(A3 Σu+) density. It is estimated that for a single pulse with amplitude of -9 kV and pulse width 30 ns, the metastable state N2(A3 Σu+) density can achieve a value in the order of 109 cm-3. The N2(A3 Σu+) density at such a value could be easily detected by laser-based experimental methods.

  13. A study of the early-stage evolution of relativistic electron-ion shock using three-dimensional particle-in-cell simulations

    SciTech Connect

    Choi, E. J.; Min, K.; Choi, C. R.; Nishikawa, K.-I.

    2014-07-15

    We report the results of a 3D particle-in-cell simulation carried out to study the early-stage evolution of the shock formed when an unmagnetized relativistic jet interacts with an ambient electron-ion plasma. Full-shock structures associated with the interaction are observed in the ambient frame. When open boundaries are employed in the direction of the jet, the forward shock is seen as a hybrid structure consisting of an electrostatic shock combined with a double layer, while the reverse shock is seen as a double layer. The ambient ions show two distinct features across the forward shock: a population penetrating into the shocked region from the precursor region and an accelerated population escaping from the shocked region into the precursor region. This behavior is a signature of a combination of an electrostatic shock and a double layer. Jet electrons are seen to be electrostatically trapped between the forward and reverse shock structures showing a ring-like distribution in a phase-space plot, while ambient electrons are thermalized and become essentially isotropic in the shocked region. The magnetic energy density grows to a few percent of the jet kinetic energy density at both the forward and the reverse shock transition layers in a rather short time scale. We see little disturbance of the jet ions over this time scale.

  14. Three dimensional particle-in-cell simulation of particle acceleration by circularly polarised inertial Alfven waves in a transversely inhomogeneous plasma

    SciTech Connect

    Tsiklauri, D.

    2012-08-15

    The process of particle acceleration by left-hand, circularly polarised inertial Alfven waves (IAW) in a transversely inhomogeneous plasma is studied using 3D particle-in-cell simulation. A cylindrical tube with, transverse to the background magnetic field, inhomogeneity scale of the order of ion inertial length is considered on which IAWs with frequency 0.3{omega}{sub ci} are launched that are allowed to develop three wavelength. As a result time-varying parallel electric fields are generated in the density gradient regions which accelerate electrons in the parallel to magnetic field direction. Driven perpendicular electric field of IAWs also heats ions in the transverse direction. Such numerical setup is relevant for solar flaring loops and earth auroral zone. This first, 3D, fully kinetic simulation demonstrates electron acceleration efficiency in the density inhomogeneity regions, along the magnetic field, of the order of 45% and ion heating, in the transverse to the magnetic field direction, of 75%. The latter is a factor of two times higher than the previous 2.5D analogous study and is in accordance with solar flare particle acceleration observations. We find that the generated parallel electric field is localised in the density inhomogeneity region and rotates in the same direction and with the same angular frequency as the initially launched IAW. Our numerical simulations seem also to suggest that the 'knee' often found in the solar flare electron spectra can alternatively be interpreted as the Landau damping (Cerenkov resonance effect) of IAWs due to the wave-particle interactions.

  15. Ion Pre-acceleration in Fully Self-consistent Particle-in-cell Simulations of Supercritical Perpendicular Reforming Shocks in Multiple Ion Species Plasmas

    NASA Astrophysics Data System (ADS)

    Rekaa, V. L.; Chapman, S. C.; Dendy, R. O.

    2014-08-01

    Supernova remnant and heliopause termination shock plasmas may contain significant populations of minority heavy ions, with relative number densities n α/ni up to 50%. Preliminary kinetic simulations of collisionless shocks in these environments showed that the reformation cycle and acceleration mechanisms at quasi-perpendicular shocks can depend on the value of n α/ni . Shock reformation unfolds on ion spatio-temporal scales, requiring fully kinetic simulations of particle dynamics, together with the self-consistent electric and magnetic fields. This paper presents the first set of particle-in-cell simulations for two ion species, protons (np ) and α-particles (n α), with differing mass and charge-to-mass ratios, that spans the entire range of n α/ni from 0% to 100%. The interplay between the differing gyro length scales and timescales of the ion species is crucial to the time-evolving phenomenology of the shocks, the downstream turbulence, and the particle acceleration at different n α/ni . We show how the overall energization changes with n α/ni , and relate this to the processes individual ions undergo in the shock region and in the downstream turbulence, and to the power spectra of magnetic field fluctuations. The crossover between shocks dominated by the respective ion species happens when n α/ni = 25%, and minority ion energization is strongest in this regime. Energization of the majority ion species scales with injection energy. The power spectrum of the downstream turbulence includes peaks at sequential ion cyclotron harmonics, suggestive of ion ring-beam collective instability.

  16. Conformal Electromagnetic Particle in Cell: A Review

    SciTech Connect

    Meierbachtol, Collin S.; Greenwood, Andrew D.; Verboncoeur, John P.; Shanker, Balasubramaniam

    2015-10-26

    We review conformal (or body-fitted) electromagnetic particle-in-cell (EM-PIC) numerical solution schemes. Included is a chronological history of relevant particle physics algorithms often employed in these conformal simulations. We also provide brief mathematical descriptions of particle-tracking algorithms and current weighting schemes, along with a brief summary of major time-dependent electromagnetic solution methods. Several research areas are also highlighted for recommended future development of new conformal EM-PIC methods.

  17. Electromagnetic Particle-in-Cell Simulations of the Solar Wind Interaction with Lunar Magnetic Anomalies: Interaction Mechanisms Under Varying Solar Wind Conditions.

    NASA Astrophysics Data System (ADS)

    Deca, Jan; Divin, Andrey; Lapenta, Giovanni; Lembège, Bertrand; Markidis, Stefano; Horányi, Mihály

    2015-04-01

    We present three-dimensional fully kinetic and electromagnetic simulations of the solar wind interaction with lunar crustal magnetic anomalies (LMAs). Using the implicit particle-in-cell code iPic3D, we confirm that LMAs may indeed be strong enough to stand off the solar wind from directly impacting the lunar surface forming a mini-magnetosphere, as suggested by spacecraft observations and theory. In contrast to earlier MHD and hybrid simulations, the fully kinetic nature of iPic3D allows to investigate the space charge effects and in particular the electron dynamics dominating the near-surface lunar plasma environment. We describe the general picture of the interaction of a dipole model centered just below the lunar surface under various solar wind and plasma conditions, and focus afterwards on the ion and electron kinetic behavior of the system. It is shown that the configuration is dominated by electron motion, because the LMA scale size is small with respect to the gyroradius of the solar wind ions. We identify a population of backstreaming ions, the deflection of magnetized electrons via the ExB-drift motion and the subsequent formation of a halo region of elevated density around the dipole source. Finally, it is shown that the presence and efficiency of the latter mechanisms are heavily impacted by the upstream plasma conditions and, on their turn, influence the overall structure and evolution of the LMA system. Our work opens new frontiers of research toward a deeper understanding of LMAs and is ideally suited to be compared with field or particle observations from spacecraft such as Kaguya (SELENE), Lunar Prospector or ARTEMIS. The ability to evaluate the implications for future lunar exploration as well as lunar science in general hinges on a better understanding of LMAs. This research has received funding from the European Commission's FP7 Program with the grant agreement SWIFF (project 2633430, swiff.eu) and EHEROES (project 284461, www.eheroes.eu). The

  18. Partical Simulation of Bounded 1D Plasma Systems

    NASA Astrophysics Data System (ADS)

    Lawson, William S.

    1989-02-01

    The physical and numerical problems of kinetic simulation of a bounded electrostatic plasma system in one planar dimension are examined, and solutions to them are presented. These problems include particle absorption, reflection and emission at boundaries, the solution of Poisson's equation under non-periodic boundary conditions, and the treatment of an external circuit connecting the boundaries. The methods which are described here are immlemented in a code named PDW1, which is available from Professor C. K. Birdsall, Plasma Theory and Simulation Group, Cory Hall, University of California, Berkeley, CA 94720.

  19. 1D quantum simulation using a solid state platform

    NASA Astrophysics Data System (ADS)

    Kirkendall, Megan; Irvin, Patrick; Huang, Mengchen; Levy, Jeremy; Lee, Hyungwoo; Eom, Chang-Beom

    Understanding the properties of large quantum systems can be challenging both theoretically and numerically. One experimental approach-quantum simulation-involves mapping a quantum system of interest onto a physical system that is programmable and experimentally accessible. A tremendous amount of work has been performed with quantum simulators formed from optical lattices; by contrast, solid-state platforms have had only limited success. Our experimental approach to quantum simulation takes advantage of nanoscale control of a metal-insulator transition at the interface between two insulating complex oxide materials. This system naturally exhibits a wide variety of ground states (e.g., ferromagnetic, superconducting) and can be configured into a variety of complex geometries. We will describe initial experiments that explore the magnetotransport properties of one-dimensional superlattices with spatial periods as small as 4 nm, comparable to the Fermi wavelength. The results demonstrate the potential of this solid-state quantum simulation approach, and also provide empirical constraints for physical models that describe the underlying oxide material properties. We gratefully acknowledge financial support from AFOSR (FA9550-12-1- 0057 (JL), FA9550-10-1-0524 (JL) and FA9550-12-1-0342 (CBE)), ONR N00014-15-1-2847 (JL), and NSF DMR-1234096 (CBE).

  20. Parametric Simulations of Slanted 1D Photonic Crystal Sensors.

    PubMed

    Breuer-Weil, Aaron; Almasoud, Naif Nasser; Abbasi, Badaruddin; Yetisen, Ali K; Yun, Seok-Hyun; Butt, Haider

    2016-12-01

    Photonic crystals and band gap materials act as manipulators of light and have a plethora of applications. They are made up of stacks of alternating dielectric constants. This article shows the simulations of an inclined, one dimensional and tuneble photonic crystal, using numerical finite element methods. The photonic crystal was made up of silver nanoparticles embedded in a hydrogel matrix and it has the ability to change and recover its periodicity. A series of factors concerning the geometry of the lattice were tested in order to analyze the efficiency, performance and optimize the properties of the optical sensor. These factors range from the size of the nanoparticles and their density within the stacks, to observing the effect of diffraction angle in readouts.

  1. Particle-in-cell and Monte Carlo collision simulations of the cathode sheath in an atmospheric direct-current arc discharge

    NASA Astrophysics Data System (ADS)

    Zhou, Wen; Guo, Heng; Jiang, Wei; Li, He-Ping; Li, Zeng-Yao; Lapenta, Giovanni

    2016-10-01

    A sheath is the transition region from plasma to a solid surface, which also plays a critical role in determining the behaviors of many lab and industrial plasmas. However, the cathode sheath properties in arc discharges are not well understood yet due to its multi-scale and kinetic features. In this letter, we have adopted an implicit particle-in-cell Monte Carlo collision (PIC-MCC) method to study the cathode sheath in an atmospheric arc discharge plasma. The cathode sheath thickness, number densities and averaged energies of electrons and ions, the electric field distribution, as well as the spatially averaged electron energy probability function (EEPF), are predicted self-consistently by using this newly developed kinetic model. It is also shown that the thermionic emission at the hot cathode surface is the dominant electron emission process to sustain the arc discharges, while the effects from secondary and field electron emissions are negligible. The present results verify the previous conjectures and experimental observations.

  2. Kinetic (particle-in-cell) simulation of nonlinear laser absorption in a finite-size plasma with a background inhomogeneous magnetic field

    SciTech Connect

    Mehdian, H. Kargarian, A.; Hajisharifi, K.

    2015-06-15

    In this paper, the effect of an external inhomogeneous magnetic field on the high intensity laser absorption rate in a sub-critical plasma has been investigated by employing a relativistic electromagnetic 1.5 dimensional particle-in-cell code. Relying on the effective nonlinear phenomena such as phase-mixing and scattering, this study shows that in a finite-size plasma the laser absorption increases with inhomogeneity of the magnetic field (i.e., reduction of characteristic length of inhomogeneous magnetic field, λ{sub p}) before exiting a considerable amount of laser energy from the plasma due to scattering process. On the other hand, the presence of the external inhomogeneous magnetic field causes the maximum absorption of laser to occur at a shorter time. Moreover, study of the kinetic results associated with the distribution function of plasma particles shows that, in a special range of the plasma density and the characteristic length of inhomogeneous magnetic field, a considerable amount of laser energy is transferred to the particles producing a population of electrons with kinetic energy along the laser direction.

  3. A study of the discharge characteristics and energy balance of a Ne/Xe pulsed planar dielectric barrier: simulation via the one-dimensional particle-in-cell with Monte Carlo collision method

    NASA Astrophysics Data System (ADS)

    Benstâali, W.; Harrache, Z.; Belasri, A.

    2012-06-01

    Plasma display panels (PDPs) are one of the leading technologies in the flat panels market. However, they are facing intense competition. Different fluid models, both one-dimensional (1D) and 2D, have been used to analyze the energy balance in PDP cells in order to find out how the xenon excitation part can be improved to optimize the luminous efficiency. The aim of this work is to present a 1D particle-in-cell with Monte Carlo collision (PIC-MCC) model for PDPs. The discharge takes place in a Xe10-Ne gas mixture at 560 Torr. The applied voltage is 381 V. We show at first that this model reproduces the electric characteristics of a single PDP discharge pulse. Then, we calculate the energy deposited by charged particles in each collision. The total energy is about 19 μJ cm-2, and the energy used in xenon excitation is of the order of 12.5% compared to the total energy deposited in the discharge. The effect of xenon content in a Xe-Ne mixture is also analyzed. The energies deposited in xenon excitation and ionization are more important when the xenon percentage has been increased from 1 to 30%. The applied voltage increases the energy deposited in xenon excitation.

  4. Ion velocity distribution at the termination shock: 1-D PIC simulation

    SciTech Connect

    Lu Quanming; Yang Zhongwei; Lembege, Bertrand

    2012-11-20

    The Voyager 2 (V2) plasma observations of the proton temperature downstream of the quasi-perpendicular heliospheric termination shock (TS) showed that upstream thermal solar wind ions played little role in the shock dissipation mechanism and their downstream temperature is an order of magnitude smaller than predicted by MHD Rankine-Hugoniot conditions. While pickup ions (PUI) are generally expected to play an important role in energy dissipation at the shock, the details remain unclear. Here, one-dimensional (1-D) Particle-in-cell (PIC) code is used to examine kinetic properties and downstream velocity distribution functions of pickup ions (the hot supra-thermal component) and solar wind protons (SWs, the cold component) at the perpendicular heliospheric termination shock. The code treats the pickup ions self-consistently as a third component. Present results show that: (1) both of the incident SWs and PUIs can be separated into two parts: reflected (R) ions and directly transmitted (DT) ions, the energy gain of the R ions at the shock front is much larger than that of the DT ions; (2) the fraction of reflected SWs and their downstream temperature decrease with the relative percentage PUI%; (3) no matter how large the PUI% is, the downstream ion velocity distribution function always can be separated into three parts: 1. a high energy tail (i.e. the wings) dominated by the reflected PUIs, 2. a low energy core mainly contributed by the directly transmitted SWs, and 3. a middle energy part which is a complicated superposition of reflected SWs and directly transmitted PUIs. The significance of the presence of pickup ions on shock front micro-structure and nonstationarity is also discussed.

  5. Analysis of plasma and neutral gas flow inside of a PET bottle under PIII condition by particle-in-cell/Monte Carlo simulation

    NASA Astrophysics Data System (ADS)

    Miyagawa, Y.; Tanaka, M.; Ikeyama, M.; Nakao, S.; Choi, J.; Miyagawa, S.

    2006-01-01

    The plasma behavior inside of a PET bottle has been simulated under the condition of plasma immersed ion implantation and deposition (PIII&D) using the simulation software "PEGASUS". The software uses the "PIC-MCCM" module for the plasma analysis and the "DSMCM" module for the gas flow field analysis. DSMCM gives densities, velocities, fluxes, temperatures and pressures of each neutral species such as the fed gas species and radicals. By coupling PIC-MCCM with DSMCM simulation, the plasma behavior in the flowing Ar gas and N2 gas has been simulated. The gas was injected from the tip of the gas inlet which was inserted into the center of the bottle. The base gas pressure was 1-50 Pa and a positive pulse voltage (maximum voltage = 0.1-1 kV) was applied to the center rod. A two-dimensional cylindrical coordinate system was used. Time evolution of the spacial distribution was obtained for densities of electrons, N2+ ions, N2∗ radicals and N atoms in N2 gas, and Ar+ ions, Ar∗ and Ar∗(4s) radicals in Ar gas. Time evolution of the particle flux and the energy flux of electrons and ions on the target surface was also obtained.

  6. Toward Extrapolating Two-Dimensional High-intensity Laser-Plasma Ion Acceleration Particle-in-Cell Simulations to Three Dimensions

    NASA Astrophysics Data System (ADS)

    Stark, D. J.; Yin, L.; Albright, B. J.; Guo, F.

    2016-10-01

    A PIC study of laser-ion acceleration via relativistic induced transparency points to how 2D-S (laser polarization in the simulation plane) and -P (out-of-plane) simulations may capture different physics characterizing these systems, visible in their entirety in (often cost-prohibitive) 3D simulations. The electron momentum anisotropy induced in the target by the laser pulse is dramatically different in the two 2D cases, manifesting in differences in polarization shift, electric field strength, density threshold for onset of relativistic induced transparency, and target expansion timescales. In particular, a trajectory analysis of individual electrons and ions may allow one to delineate the role of the fields and modes responsible for ion acceleration. With this information, we consider how 2D simulations might be used to develop, in some respects, a fully 3D understanding of the system. Work performed under the auspices of the U.S. DOE by the LANS, LLC, Los Alamos National Laboratory under Contract No. DE-AC52-06NA25396. Funding provided by the Los Alamos National Laboratory Directed Research and Development Program.

  7. Two Dimensional Particle-in-cell/Monte Carlo (PIC/MC) Simulation of Radio Frequency Capacitively Coupled Plasmas with a Dielectric Side Wall Boundary

    NASA Astrophysics Data System (ADS)

    Liu, Yue; Booth, Jean-Paul; Chabert, Pascal; cold plasma Team, LPP Team

    2016-09-01

    The majority of previous two dimensional (usually fluid) simulations of radio frequency capacitively coupled plasmas have focused on geometrically-asymmetric reactors (with a much larger grounded electrode than power electrode), which produces a strong dc self-bias. However, a commonly-used geometry comprises electrodes of equal area surrounded by a dielectric side wall, but this has not been widely simulated. We have developed a two dimensional (Cartesian) PIC/MC code based on the work of Hongyu Wang, Wei Jiang and Younian Wang, to simulate argon plasmas in this kind of chamber. Even using a thick dielectric, a peak in plasma density and electron power deposition is adjacent to the dielectric. The profiles of the electron and ion fluxes show that the period-averaged currents to the powered electrode are not locally balanced; the electron flux peaks closer to the dielectric edge, before dropping sharply. Finally, the effect of the dielectric thickness on the surface charge distribution and the angular distributions of ions arriving at boundaries is examined. This work is supported by China Scholarship Council.

  8. Build up An Operational Flood Simulation from Existing 1D Channel Flow Works

    NASA Astrophysics Data System (ADS)

    Chang, Che-Hao; Hsu, Chih-Tsung; Wu, Shiang-Jen; Lien, Ho-Cheng; Shen, Jhih-Cyuan; Chung, Ming-Ko

    2016-04-01

    Several 2D flood simulations will be developed for urban area in recent years in Taiwan. Original ideas focus on the static flood maps produced by the 2D flood simulation with respect to design events, which could be useful no matter for planning or disaster awareness. However, an extra bonus is expected to see if we can reuse the 2D flood simulation framework for operational use or not. Such a project goal inspire us to setup a standard operation procedure before any progress from existing 1D channel flow works. 3 key issues are taken into account in the SOP: 1. High Resolution Terrain: A 1m resolution digital terrain model (DTM) is considered as a reference. The Channels and structures should be setup in 1D channel flow works if we can identify under such high resolution. One should examine the existing 1D channel flow works consistent with the DTM or not. 2. Meteo Stations Referenced: Real time precipitation would be send to referenced location in RR models during an operational forecast. Existing 1D channels flow works are usually specifically for design events which are not necessarily equipped with such references. 3. Time Consuming: A full scale 2D flood simulation needs a lot of computation resources. A solution should be derived within practical time limits. Under the above consideration, some impacts and procedures will be analyzed and developed to setup the SOP for further model modification.

  9. 1D PIC-DSMC simulations of breakdown in microscale gaps

    NASA Astrophysics Data System (ADS)

    Moore, Chris H.; Hopkins, Matthew M.; Crozier, Paul S.; Boerner, Jeremiah J.; Musson, Lawrence C.; Hooper, Russell W.; Bettencourt, Matthew T.

    2012-11-01

    An explicit electrostatic particle-in-cell (PIC) code with complex boundary conditions and direct simulation Monte Carlo (DSMC) particle collisions is utilized to investigate one dimensional direct current breakdown between two electrodes separated by air at STP. The simulation model includes Auger neutralization and cold field electron emission from the cathode as well as electron-neutral elastic, ionization, and excitation interactions. The simulated breakdown voltages at various electrode gap sizes are compared to experimental data and the Paschen curve. It is found that cold field electron emission can explain the breakdown voltage deviation from the Paschen curve measured for small gaps. Breakdown in large gaps proceeds over multiple ion transit timescales as electrons created via Auger neutralization of ions at the cathode quickly stream across the gap, creating new ions which accelerate towards the cathode and release another "pulse" of electrons. If the resultant pulse of electrons is larger than the initial pulse, then this process can build up a significant quasi-neutral plasma in the gap and the voltage drop across the gap will occur primarily across the (thin) sheath. Breakdown is accelerated if the electric field at the cathode surface is large enough for significant cold field emission flux, which increases the plasma density and decreases the Debye length and thus the sheath size, further increasing the electric field and cold field emission flux from the cathode surface. Breakdown in air pressure gaps was found to be sensitive to the differential scattering cross section for electron-neutral interactions. Isotropic scattering of elastic collisions results in lower breakdown voltages at moderate gaps (several mean free paths) and higher breakdown voltages for large gap sizes compared to when more accurate forward-biased scattering distributions are used. The dependence of breakdown voltage on the scattering distribution is due to a competition

  10. General mechanism and dynamics of the solar wind interaction with lunar magnetic anomalies from 3-D particle-in-cell simulations

    NASA Astrophysics Data System (ADS)

    Deca, Jan; Divin, Andrey; Lembège, Bertrand; Horányi, Mihály; Markidis, Stefano; Lapenta, Giovanni

    2015-08-01

    We present a general model of the solar wind interaction with a dipolar lunar crustal magnetic anomaly (LMA) using three-dimensional full-kinetic and electromagnetic simulations. We confirm that LMAs may indeed be strong enough to stand off the solar wind from directly impacting the lunar surface, forming a so-called "minimagnetosphere," as suggested by spacecraft observations and theory. We show that the LMA configuration is driven by electron motion because its scale size is small with respect to the gyroradius of the solar wind ions. We identify a population of back-streaming ions, the deflection of magnetized electrons via the E × B drift motion, and the subsequent formation of a halo region of elevated density around the dipole source. Finally, it is shown that the presence and efficiency of the processes are heavily impacted by the upstream plasma conditions and, on their turn, influence the overall structure and evolution of the LMA system. Understanding the detailed physics of the solar wind interaction with LMAs, including magnetic shielding, particle dynamics and surface charging is vital to evaluate its implications for lunar exploration.

  11. Efficient GPU implementation for Particle in Cell algorithm

    SciTech Connect

    Joseph, Rejith George; Ravunnikutty, Girish; Ranka, Sanjay; Klasky, Scott A

    2011-01-01

    Particle in cell method is widely used method in the plasma physics to study the trajectories of charged particles under electromagnetic fields. The PIC algorithm is computationally intensive and its time requirements are proportional to the number of charged particles involved in the simulation. The focus of the paper is to parallelize the PIC algorithm on Graphics Processing Unit (GPU). We present several performance tradeoffs related to the small shared memory and atomic operations on the GPU to achieve high performance.

  12. 1D and 2D simulations of seismic wave propagation in fractured media

    NASA Astrophysics Data System (ADS)

    Möller, Thomas; Friederich, Wolfgang

    2016-04-01

    Fractures and cracks have a significant influence on the propagation of seismic waves. Their presence causes reflections and scattering and makes the medium effectively anisotropic. We present a numerical approach to simulation of seismic waves in fractured media that does not require direct modelling of the fracture itself, but uses the concept of linear slip interfaces developed by Schoenberg (1980). This condition states that at an interface between two imperfectly bonded elastic media, stress is continuous across the interface while displacement is discontinuous. It is assumed that the jump of displacement is proportional to stress which implies a jump in particle velocity at the interface. We use this condition as a boundary condition to the elastic wave equation and solve this equation in the framework of a Nodal Discontinuous Galerkin scheme using a velocity-stress formulation. We use meshes with tetrahedral elements to discretise the medium. Each individual element face may be declared as a slip interface. Numerical fluxes have been derived by solving the 1D Riemann problem for slip interfaces with elastic and viscoelastic rheology. Viscoelasticity is realised either by a Kelvin-Voigt body or a Standard Linear Solid. These fluxes are not limited to 1D and can - with little modification - be used for simulations in higher dimensions as well. The Nodal Discontinuous Galerkin code "neXd" developed by Lambrecht (2013) is used as a basis for the numerical implementation of this concept. We present examples of simulations in 1D and 2D that illustrate the influence of fractures on the seismic wavefield. We demonstrate the accuracy of the simulation through comparison to an analytical solution in 1D.

  13. A particle-in-cell approach to obliquely propagating electrostatic waves

    SciTech Connect

    Koen, Etienne J.; Collier, Andrew B.; Maharaj, Shimul K.

    2014-09-15

    The electron-acoustic and beam-driven modes associated with electron beams have previously been identified and studied numerically. These modes are associated with Broadband Electrostatic Noise found in the Earth's auroral and polar cusp regions. Using a 1-D spatial Particle-in-Cell simulation, the electron-acoustic instability is studied for a magnetized plasma, which includes cool ions, cool electrons and a hot, drifting electron beam. Both the weakly and strongly magnetized regimes with varying wave propagation angle, θ, with respect to the magnetic field are studied. The amplitude and frequency of the electron-acoustic mode are found to decrease with increasing θ. The amplitude of the electron-acoustic mode is found to significantly grow at intermediate wavenumber ranges. It reaches a saturation level at the point, where a plateau forms in the hot electron velocity distribution after which the amplitude of the electron-acoustic mode decays.

  14. Finite grid instability and spectral fidelity of the electrostatic Particle-In-Cell algorithm

    SciTech Connect

    Huang, C. -K.; Zeng, Y.; Wang, Y.; Meyers, M. D.; Yi, S.; Albright, B. J.

    2016-10-01

    The origin of the Finite Grid Instability (FGI) is studied by resolving the dynamics in the 1D electrostatic Particle-In-Cell (PIC) model in the spectral domain at the single particle level and at the collective motion level. The spectral fidelity of the PIC model is contrasted with the underlying physical system or the gridless model. The systematic spectral phase and amplitude errors from the charge deposition and field interpolation are quantified for common particle shapes used in the PIC models. Lastly, it is shown through such analysis and in simulations that the lack of spectral fidelity relative to the physical system due to the existence of aliased spatial modes is the major cause of the FGI in the PIC model.

  15. Finite grid instability and spectral fidelity of the electrostatic Particle-In-Cell algorithm

    NASA Astrophysics Data System (ADS)

    Huang, C.-K.; Zeng, Y.; Wang, Y.; Meyers, M. D.; Yi, S.; Albright, B. J.

    2016-10-01

    The origin of the Finite Grid Instability (FGI) is studied by resolving the dynamics in the 1D electrostatic Particle-In-Cell (PIC) model in the spectral domain at the single particle level and at the collective motion level. The spectral fidelity of the PIC model is contrasted with the underlying physical system or the gridless model. The systematic spectral phase and amplitude errors from the charge deposition and field interpolation are quantified for common particle shapes used in the PIC models. It is shown through such analysis and in simulations that the lack of spectral fidelity relative to the physical system due to the existence of aliased spatial modes is the major cause of the FGI in the PIC model.

  16. Finite grid instability and spectral fidelity of the electrostatic Particle-In-Cell algorithm

    DOE PAGES

    Huang, C. -K.; Zeng, Y.; Wang, Y.; ...

    2016-10-01

    The origin of the Finite Grid Instability (FGI) is studied by resolving the dynamics in the 1D electrostatic Particle-In-Cell (PIC) model in the spectral domain at the single particle level and at the collective motion level. The spectral fidelity of the PIC model is contrasted with the underlying physical system or the gridless model. The systematic spectral phase and amplitude errors from the charge deposition and field interpolation are quantified for common particle shapes used in the PIC models. Lastly, it is shown through such analysis and in simulations that the lack of spectral fidelity relative to the physical systemmore » due to the existence of aliased spatial modes is the major cause of the FGI in the PIC model.« less

  17. A new approach to theoretical investigations of high harmonics generation by means of fs laser interaction with overdense plasma layers. Combining particle-in-cell simulations with machine learning.

    NASA Astrophysics Data System (ADS)

    Mihailescu, A.

    2016-12-01

    Within the past decade, various experimental and theoretical investigations have been performed in the field of high-order harmonics generation (HHG) by means of femtosecond (fs) laser pulses interacting with laser produced plasmas. Numerous potential future applications thus arise. Beyond achieving higher conversion efficiency for higher harmonic orders and hence harmonic power and brilliance, there are more ambitious scientific goals such as attaining shorter harmonic wavelengths or reducing harmonic pulse durations towards the attosecond and even the zeptosecond range. High order harmonics are also an attractive diagnostic tool for the laser-plasma interaction process itself. Particle-in-Cell (PIC) simulations are known to be one of the most important numerical instruments employed in plasma physics and in laser-plasma interaction investigations. The novelty brought by this paper consists in combining the PIC method with several machine learning approaches. For predictive modelling purposes, a universal functional approximator is used, namely a multi-layer perceptron (MLP), in conjunction with a self-organizing map (SOM). The training sets have been retrieved from the PIC simulations and also from the available literature in the field. The results demonstrate the potential utility of machine learning in predicting optimal interaction scenarios for gaining higher order harmonics or harmonics with particular features such as a particular wavelength range, a particular harmonic pulse duration or a certain intensity. Furthermore, the author will show how machine learning can be used for estimations of electronic temperatures, proving that it can be a reliable tool for obtaining better insights into the fs laser interaction physics.

  18. Quantum simulation of 2D topological physics in a 1D array of optical cavities.

    PubMed

    Luo, Xi-Wang; Zhou, Xingxiang; Li, Chuan-Feng; Xu, Jin-Shi; Guo, Guang-Can; Zhou, Zheng-Wei

    2015-07-06

    Orbital angular momentum of light is a fundamental optical degree of freedom characterized by unlimited number of available angular momentum states. Although this unique property has proved invaluable in diverse recent studies ranging from optical communication to quantum information, it has not been considered useful or even relevant for simulating nontrivial physics problems such as topological phenomena. Contrary to this misconception, we demonstrate the incredible value of orbital angular momentum of light for quantum simulation by showing theoretically how it allows to study a variety of important 2D topological physics in a 1D array of optical cavities. This application for orbital angular momentum of light not only reduces required physical resources but also increases feasible scale of simulation, and thus makes it possible to investigate important topics such as edge-state transport and topological phase transition in a small simulator ready for immediate experimental exploration.

  19. Nanoelectronic Modeling (NEMO): Moving from commercial grade 1-D simulation to prototype 3-D simulation

    NASA Astrophysics Data System (ADS)

    Klimeck, Gerhard

    2001-03-01

    The quantum mechanical functionality of commercially pursued heterostructure devices such as resonant tunneling diodes (RTDs), quantum well infrared photodetectors, and quantum well lasers are enabled by material variations on an atomic scale. The creation of these heterostructure devices is realized in a vast design space of material compositions, layer thicknesses and doping profiles. The full experimental exploration of this design space is unfeasible and a reliable design tool is needed. The Nanoelectronic Modeling tool (NEMO) is one of the first commercial grade attempts for such a modeling tool. NEMO was developed as a general-purpose quantum mechanics-based 1-D device design and analysis tool from 1993-97 by the Central Research Laboratory of Texas Instruments (later Raytheon Systems). NEMO enables(R. Lake, G. Klimeck, R. C. Bowen, and D. Jovanovic, J. Appl. Phys. 81), 7845 (1997). the fundamentally sound inclusion of the required(G. Klimeck et al.), in the 1997 55th Annual Device Research Conference Digest, (IEEE, NJ, 1997), p. 92^,(R. C. Bowen et al.), J. Appl. Phys 81, 3207 (1997). physics: bandstructure, scattering, and charge self-consistency based on the non-equilibrium Green function approach. A new class of devices which require full 3-D quantum mechanics based models is starting to emerge: quantum dots, or in general semiconductor based deca-nano devices. We are currently building a 3-D modeling tool based on NEMO to include the important physics to understand electronic stated in such superscaled structures. This presentation will overview various facets of the NEMO 1-D tool such electron transport physics in RTDs, numerical technology, software engineering and graphical user interface. The lessons learned from that work are now entering the NEMO 3-D development and first results using the NEMO 3-D prototype will be shown. More information about

  20. 1D GAS-DYNAMIC SIMULATION OF SHOCK-WAVE PROCESSES VIA INTERNET

    SciTech Connect

    Khishchenko, K. V.; Levashov, P. R.; Povarnitsyn, M. E.; Zakharenkov, A. S.

    2009-12-28

    We present a Web-interface for 1D simulation of different shock-wave experiments. The choosing of initial parameters, the modeling itself and output data treatment can be made directly via the Internet. The interface is based upon the expert system on shock-wave data and equations of state and contains both the Eulerian and Lagrangian Godunov hydrocodes. The availability of equations of state for a broad set of substances makes this system a useful tool for planning and interpretation of shock-wave experiments. As an example of simulation with the system, results of modeling of multistep shock loading of potassium between polytetrafluoroethylene and stainless steel plates are presented in comparison with experimental data from Shakhray et al.(2005).

  1. On the Numerical Dispersion of Electromagnetic Particle-In-Cell Code : Finite Grid Instability

    SciTech Connect

    Meyers, Michael David; Huang, Chengkun; Zeng, Yong; Yi, Sunghwan; Albright, Brian James

    2014-07-15

    The Particle-In-Cell (PIC) method is widely used in relativistic particle beam and laser plasma modeling. However, the PIC method exhibits numerical instabilities that can render unphysical simulation results or even destroy the simulation. For electromagnetic relativistic beam and plasma modeling, the most relevant numerical instabilities are the finite grid instability and the numerical Cherenkov instability. We review the numerical dispersion relation of the electromagnetic PIC algorithm to analyze the origin of these instabilities. We rigorously derive the faithful 3D numerical dispersion of the PIC algorithm, and then specialize to the Yee FDTD scheme. In particular, we account for the manner in which the PIC algorithm updates and samples the fields and distribution function. Temporal and spatial phase factors from solving Maxwell's equations on the Yee grid with the leapfrog scheme are also explicitly accounted for. Numerical solutions to the electrostatic-like modes in the 1D dispersion relation for a cold drifting plasma are obtained for parameters of interest. In the succeeding analysis, we investigate how the finite grid instability arises from the interaction of the numerical 1D modes admitted in the system and their aliases. The most significant interaction is due critically to the correct representation of the operators in the dispersion relation. We obtain a simple analytic expression for the peak growth rate due to this interaction.

  2. Sparse grid techniques for particle-in-cell schemes

    NASA Astrophysics Data System (ADS)

    Ricketson, L. F.; Cerfon, A. J.

    2017-02-01

    We propose the use of sparse grids to accelerate particle-in-cell (PIC) schemes. By using the so-called ‘combination technique’ from the sparse grids literature, we are able to dramatically increase the size of the spatial cells in multi-dimensional PIC schemes while paying only a slight penalty in grid-based error. The resulting increase in cell size allows us to reduce the statistical noise in the simulation without increasing total particle number. We present initial proof-of-principle results from test cases in two and three dimensions that demonstrate the new scheme’s efficiency, both in terms of computation time and memory usage.

  3. 1d Numerical Simulation of A Swiss Debris Flow: Comparison of Flow Laws

    NASA Astrophysics Data System (ADS)

    McArdell, B. W.; Graf, Ch.; Naef, D.; Rickenmann, D.

    Efforts to numerically model debris flows have been limited by a lack of appropriate numerical tools. Here we report on our efforts to systematically evaluate different flow laws using a numerical tool under development at our institute. The model, DFEM, is a finite element solution of the shallow water equations in one or two dimensions and is based on the FEMTOOL libraries from Rutschmann (1993). Debris flow constitu- tive relations or flow laws include turbulent (e.g. Manning, Chézy, Voellmy), laminar (Bingham, Newtonian laminar), and inertial formulations (dilatant/grain shearing) as well as combinations of flow laws when appropriate. The model is applied to a recent debris flow event from the Schipfenbach torrent, Switzerland (Hürlimann, submitted), where we maintain an automated debris flow observation station. Observations include flow depth measurements from ultrasonic depth measurement devices, reach-averaged velocities estimated from the travel time between ultrasonic gages and geophones, velocity and flow behavior from video cam- eras situated near the flow retention basin on the fan, and post-event field surveys. Preliminary results suggest that the flow of debris in the steep reaches of the torrent channel can be reasonably described by a simple turbulent flow law (e.g. Manning- Strickler or Chézy) with a large overall flow resistance, and that both the flow in the channel and the deposition on the fan can be satisfactorily simulated using the Voellmy fluid approach. The results using the Voellmy fluid approach are in agree- ment with results calculated from the AVAL-1D snow avalanche simulation code and input parameters for debris instead of snow, corroborating the implementation in the DFEM model. The AVAL-1D code is commercially available, providing another tool that may be used by workers in the natural hazards field for debris flow routing in torrent channels and on alluvial fans. References: Hürlimann, M., Rickenmann, D. and Graf, Ch., Field

  4. Specifications of ZnO growth for heterostructure solar cell and PC1D based simulations

    PubMed Central

    Hussain, Babar; Ebong, Abasifreke

    2015-01-01

    This data article is related to our recently published article (Hussain et al., in press [1]) where we have proposed a new solar cell model based on n-ZnO as front layer and p-Si as rear region. The ZnO layer will act as an active n-layer as well as antireflection (AR) coating saving considerable processing cost. There are several reports presenting use of ZnO as window/antireflection coating in solar cells (Mansoor et al., 2015; Haq et al., 2014; Hussain et al., 2014; Matsui et al., 2014; Ding et al., 2014 [2], [3], [4], [5], [6]) but, here, we provide data specifically related to simultaneous use of ZnO as n-layer and AR coating. Apart from the information we already published, we provide additional data related to growth of ZnO (with and without Ga incorporation) layers using MOCVD. The data related to PC1D based simulation of internal and external quantum efficiencies with and without antireflection effects of ZnO as well as the effects of doping level in p-Si on current–voltage characteristics have been provided. PMID:26587557

  5. Specifications of ZnO growth for heterostructure solar cell and PC1D based simulations.

    PubMed

    Hussain, Babar; Ebong, Abasifreke

    2015-12-01

    This data article is related to our recently published article (Hussain et al., in press [1]) where we have proposed a new solar cell model based on n-ZnO as front layer and p-Si as rear region. The ZnO layer will act as an active n-layer as well as antireflection (AR) coating saving considerable processing cost. There are several reports presenting use of ZnO as window/antireflection coating in solar cells (Mansoor et al., 2015; Haq et al., 2014; Hussain et al., 2014; Matsui et al., 2014; Ding et al., 2014 [2], [3], [4], [5], [6]) but, here, we provide data specifically related to simultaneous use of ZnO as n-layer and AR coating. Apart from the information we already published, we provide additional data related to growth of ZnO (with and without Ga incorporation) layers using MOCVD. The data related to PC1D based simulation of internal and external quantum efficiencies with and without antireflection effects of ZnO as well as the effects of doping level in p-Si on current-voltage characteristics have been provided.

  6. A 1D plug flow reactor as validation tool for reactive transport simulations

    NASA Astrophysics Data System (ADS)

    Battaïa, G.; Garcia, D.

    2012-04-01

    Predictions in CO2 geological sequestration involve a broad range of earth sciences linked in complex models. Amongst the processes commonly described, fluid-rock interactions are both a central issue and a source of discomfort for modelers since it has to deal with 1) kinetics data obtained through experimental procedures that dramatically differ from natural systems and 2) reactive surface model that are very diverse and often empirical. This study presents a new type of plug flow reactor developed to provide an experimental validation of reactive transport simulations. This is a 1D pressurized packed-bed plug-flow reactor containing a granular mixture as a porous medium. This mixture is composed of a reactive solids and unreactive quartz used to set an adequate ratio between fluid and reactive mineral to control the front velocity. A seven sampling valve unit allows concentration profiles of the reacting fluid to be captured at any time. One the one side, a low reaction rate (diopside, HNO3, pH 2) produces linear profile resulting from a constant dissolution rate along the reactor length. But on the other side, when performing the reaction of CO2 saturated solutions (5 bar) at 40°C with dolomite it gives rise to dissolution fronts migrating downstream. A proper projection of experimental data reveals a dynamic steady state of front shape is reached. Texture of the mineral recovered at the end of the experiment is quantified by Hg-porosimetry and these results are linked to SEM observations. Altogether, this provides a robust way for the parameterization of a reactive surface area model.

  7. Stability and accuracy of 3D neutron transport simulations using the 2D/1D method in MPACT

    NASA Astrophysics Data System (ADS)

    Collins, Benjamin; Stimpson, Shane; Kelley, Blake W.; Young, Mitchell T. H.; Kochunas, Brendan; Graham, Aaron; Larsen, Edward W.; Downar, Thomas; Godfrey, Andrew

    2016-12-01

    A consistent "2D/1D" neutron transport method is derived from the 3D Boltzmann transport equation, to calculate fuel-pin-resolved neutron fluxes for realistic full-core Pressurized Water Reactor (PWR) problems. The 2D/1D method employs the Method of Characteristics to discretize the radial variables and a lower order transport solution to discretize the axial variable. This paper describes the theory of the 2D/1D method and its implementation in the MPACT code, which has become the whole-core deterministic neutron transport solver for the Consortium for Advanced Simulations of Light Water Reactors (CASL) core simulator VERA-CS. Several applications have been performed on both leadership-class and industry-class computing clusters. Results are presented for whole-core solutions of the Watts Bar Nuclear Power Station Unit 1 and compared to both continuous-energy Monte Carlo results and plant data.

  8. GIS-based channel flow and sediment transport simulation using CCHE1D coupled with AnnAGNPS

    Technology Transfer Automated Retrieval System (TEKTRAN)

    CCHE1D (Center for Computational Hydroscience and Engineering 1-Dimensional model) simulates unsteady free-surface flows with nonequilibrium, nonuniform sediment transport in dendritic channel networks. Since early 1990’s, the model and its software packages have been developed and continuously main...

  9. One-dimensional particle-in-cell simulation on the influence of electron and ion temperature on the sheath expansion process in the post-arc stage of vacuum circuit breaker

    SciTech Connect

    Mo, Yongpeng; Shi, Zongqian; Jia, Shenli; Wang, Lijun

    2015-02-15

    The inter-contact region of vacuum circuit breakers is filled with residual plasma at the moment when the current is zero after the burning of metal vapor arc. The residual plasma forms an ion sheath in front of the post-arc cathode. The sheath then expands towards the post-arc anode under the influence of a transient recovery voltage. In this study, a one-dimensional particle-in-cell model is developed to investigate the post-arc sheath expansion. The influence of ion and electron temperatures on the decrease in local plasma density at the post-arc cathode side and post-arc anode side is discussed. When the decay in the local plasma density develops from the cathode and anode sides into the high-density region and merges, the overall plasma density in the inter-contact region begins to decrease. Meanwhile, the ion sheath begins to expand faster. Furthermore, the theory of ion rarefaction wave only explains quantitatively the decrease in the overall plasma density at relatively low ion temperatures. With the increase of ion temperature to certain extent, another possible reason for the decrease in the overall plasma density is proposed and results from the more active thermal diffusion of plasma.

  10. Stability and accuracy of 3D neutron transport simulations using the 2D/1D method in MPACT

    DOE PAGES

    Collins, Benjamin; Stimpson, Shane; Kelley, Blake W.; ...

    2016-08-25

    We derived a consistent “2D/1D” neutron transport method from the 3D Boltzmann transport equation, to calculate fuel-pin-resolved neutron fluxes for realistic full-core Pressurized Water Reactor (PWR) problems. The 2D/1D method employs the Method of Characteristics to discretize the radial variables and a lower order transport solution to discretize the axial variable. Our paper describes the theory of the 2D/1D method and its implementation in the MPACT code, which has become the whole-core deterministic neutron transport solver for the Consortium for Advanced Simulations of Light Water Reactors (CASL) core simulator VERA-CS. We also performed several applications on both leadership-class and industry-classmore » computing clusters. Results are presented for whole-core solutions of the Watts Bar Nuclear Power Station Unit 1 and compared to both continuous-energy Monte Carlo results and plant data.« less

  11. Stability and accuracy of 3D neutron transport simulations using the 2D/1D method in MPACT

    SciTech Connect

    Collins, Benjamin; Stimpson, Shane; Kelley, Blake W.; Young, Mitchell T. H.; Kochunas, Brendan; Graham, Aaron; Larsen, Edward W.; Downar, Thomas; Godfrey, Andrew

    2016-08-25

    We derived a consistent “2D/1D” neutron transport method from the 3D Boltzmann transport equation, to calculate fuel-pin-resolved neutron fluxes for realistic full-core Pressurized Water Reactor (PWR) problems. The 2D/1D method employs the Method of Characteristics to discretize the radial variables and a lower order transport solution to discretize the axial variable. Our paper describes the theory of the 2D/1D method and its implementation in the MPACT code, which has become the whole-core deterministic neutron transport solver for the Consortium for Advanced Simulations of Light Water Reactors (CASL) core simulator VERA-CS. We also performed several applications on both leadership-class and industry-class computing clusters. Results are presented for whole-core solutions of the Watts Bar Nuclear Power Station Unit 1 and compared to both continuous-energy Monte Carlo results and plant data.

  12. Simulations of Edge Effect in 1D Spin Crossover Compounds by Atom-Phonon Coupling Model

    NASA Astrophysics Data System (ADS)

    Linares, J.; Chiruta, D.; Jureschi, C. M.; Alayli, Y.; Turcu, C. O.; Dahoo, P. R.

    2016-08-01

    We used the atom-phonon coupling model to explain and illustrate the behaviour of a linear nano-chain of molecules. The analysis of the system's behaviour was performed using Free Energy method, and by applying Monte Carlo Metropolis (MCM) method which take into account the phonon contribution. In particular we tested both the MCM algorithm and the dynamic-matrix method and we expose how the thermal behaviour of a 1D spin crossover system varies as a function of different factors. Furthermore we blocked the edge atoms of the chain in its high spin state to study the effect on the system's behaviour.

  13. Simulation and optimization of 1-D periodic dielectric nanostructures for light-trapping.

    PubMed

    Wang, Peng; Menon, Rajesh

    2012-01-16

    Light-trapping is essential to improve the performance of thin-film solar cells. In this paper, we perform a parametric optimization of 1-D square and sinusoidal grating structures that act as nanophotonic scatterers to increase light absorption in ultra-thin (10nm) solar cells. Our optimization reveals that the short-circuit current density in a device of active-layer thickness 10nm can be improved by a factor of ~5 in the presence of the scattering structure. More complex geometries allow for increased degrees of design freedom and potentially high enhancement of light absorption.

  14. NASA One-Dimensional Combustor Simulation--User Manual for S1D_ML

    NASA Technical Reports Server (NTRS)

    Stueber, Thomas J.; Paxson, Daniel E.

    2014-01-01

    The work presented in this paper is to promote research leading to a closed-loop control system to actively suppress thermo-acoustic instabilities. To serve as a model for such a closed-loop control system, a one-dimensional combustor simulation composed using MATLAB software tools has been written. This MATLAB based process is similar to a precursor one-dimensional combustor simulation that was formatted as FORTRAN 77 source code. The previous simulation process requires modification to the FORTRAN 77 source code, compiling, and linking when creating a new combustor simulation executable file. The MATLAB based simulation does not require making changes to the source code, recompiling, or linking. Furthermore, the MATLAB based simulation can be run from script files within the MATLAB environment or with a compiled copy of the executable file running in the Command Prompt window without requiring a licensed copy of MATLAB. This report presents a general simulation overview. Details regarding how to setup and initiate a simulation are also presented. Finally, the post-processing section describes the two types of files created while running the simulation and it also includes simulation results for a default simulation included with the source code.

  15. On the numerical dispersion of electromagnetic particle-in-cell code: Finite grid instability

    SciTech Connect

    Meyers, M.D.; Huang, C.-K.; Zeng, Y.; Yi, S.A.; Albright, B.J.

    2015-09-15

    The Particle-In-Cell (PIC) method is widely used in relativistic particle beam and laser plasma modeling. However, the PIC method exhibits numerical instabilities that can render unphysical simulation results or even destroy the simulation. For electromagnetic relativistic beam and plasma modeling, the most relevant numerical instabilities are the finite grid instability and the numerical Cherenkov instability. We review the numerical dispersion relation of the Electromagnetic PIC model. We rigorously derive the faithful 3-D numerical dispersion relation of the PIC model, for a simple, direct current deposition scheme, which does not conserve electric charge exactly. We then specialize to the Yee FDTD scheme. In particular, we clarify the presence of alias modes in an eigenmode analysis of the PIC model, which combines both discrete and continuous variables. The manner in which the PIC model updates and samples the fields and distribution function, together with the temporal and spatial phase factors from solving Maxwell's equations on the Yee grid with the leapfrog scheme, is explicitly accounted for. Numerical solutions to the electrostatic-like modes in the 1-D dispersion relation for a cold drifting plasma are obtained for parameters of interest. In the succeeding analysis, we investigate how the finite grid instability arises from the interaction of the numerical modes admitted in the system and their aliases. The most significant interaction is due critically to the correct representation of the operators in the dispersion relation. We obtain a simple analytic expression for the peak growth rate due to this interaction, which is then verified by simulation. We demonstrate that our analysis is readily extendable to charge conserving models.

  16. On the numerical dispersion of electromagnetic particle-in-cell code: Finite grid instability

    NASA Astrophysics Data System (ADS)

    Meyers, M. D.; Huang, C.-K.; Zeng, Y.; Yi, S. A.; Albright, B. J.

    2015-09-01

    The Particle-In-Cell (PIC) method is widely used in relativistic particle beam and laser plasma modeling. However, the PIC method exhibits numerical instabilities that can render unphysical simulation results or even destroy the simulation. For electromagnetic relativistic beam and plasma modeling, the most relevant numerical instabilities are the finite grid instability and the numerical Cherenkov instability. We review the numerical dispersion relation of the Electromagnetic PIC model. We rigorously derive the faithful 3-D numerical dispersion relation of the PIC model, for a simple, direct current deposition scheme, which does not conserve electric charge exactly. We then specialize to the Yee FDTD scheme. In particular, we clarify the presence of alias modes in an eigenmode analysis of the PIC model, which combines both discrete and continuous variables. The manner in which the PIC model updates and samples the fields and distribution function, together with the temporal and spatial phase factors from solving Maxwell's equations on the Yee grid with the leapfrog scheme, is explicitly accounted for. Numerical solutions to the electrostatic-like modes in the 1-D dispersion relation for a cold drifting plasma are obtained for parameters of interest. In the succeeding analysis, we investigate how the finite grid instability arises from the interaction of the numerical modes admitted in the system and their aliases. The most significant interaction is due critically to the correct representation of the operators in the dispersion relation. We obtain a simple analytic expression for the peak growth rate due to this interaction, which is then verified by simulation. We demonstrate that our analysis is readily extendable to charge conserving models.

  17. Reducing the number of parameters in 1D arterial blood flow modeling: less is more for patient-specific simulations.

    PubMed

    Epstein, Sally; Willemet, Marie; Chowienczyk, Phil J; Alastruey, Jordi

    2015-07-01

    Patient-specific one-dimensional (1D) blood flow modeling requires estimating model parameters from available clinical data, ideally acquired noninvasively. The larger the number of arterial segments in a distributed 1D model, the greater the number of input parameters that need to be estimated. We investigated the effect of a reduction in the number of arterial segments in a given distributed 1D model on the shape of the simulated pressure and flow waveforms. This is achieved by systematically lumping peripheral 1D model branches into windkessel models that preserve the net resistance and total compliance of the original model. We applied our methodology to a model of the 55 larger systemic arteries in the human and to an extended 67-artery model that contains the digital arteries that perfuse the fingers. Results show good agreement in the shape of the aortic and digital waveforms between the original 55-artery (67-artery) and reduced 21-artery (37-artery) models. Reducing the number of segments also enables us to investigate the effect of arterial network topology (and hence reflection sites) on the shape of waveforms. Results show that wave reflections in the thoracic aorta and renal arteries play an important role in shaping the aortic pressure and flow waves and in generating the second peak of the digital pressure and flow waves. Our novel methodology is important to simplify the computational domain while maintaining the precision of the numerical predictions and to assess the effect of wave reflections.

  18. Comparison of 1D stagnation solutions to 3D wire-array Z pinch simulations in absence of radiation

    NASA Astrophysics Data System (ADS)

    Yu, Edmund; Velikovich, Alexander; Maron, Yitzhak

    2013-10-01

    In the idealized picture of a Z pinch, a cylindrically symmetric plasma shell implodes towards axis. In this 1D (radial) picture, the resulting stagnation is very efficient: all the kinetic energy of the shell converts to internal energy, as for instance in the Noh shock solution or the homogeneous stagnation flow. If we generalize the problem to 2D by deforming the shell from perfectly circular to oblate, the resulting stagnation will not be as efficient. As in the Hiemenz flow, in which a jet of fluid strikes a rigid flat boundary and squirts out to the sides, the more complicated flows allowed in 2D allow flow kinetic energy to redirect rather than stagnate. With this picture in mind, we might expect the stagnation of a wire-array Z pinch, which in actuality forms a highly distorted 3D imploding plasma, to dissipate its kinetic energy inefficiently due to the lack of symmetry, and be indescribable by means of the idealized 1D stagnation solutions. On the other hand, one might expect that if the imploding plasma is sufficiently messy, the non-uniformities might ``wash out,'' allowing a quasi-1D description of the averaged quantities of plasma. In this work we explore this idea, comparing predictions of 1D stagnation solutions with 3D simulation. Sandia is a multiprogram laboratory operated by Sandia Corporation, a Lockheed Martin Company, for the United States Department of Energy under contract DE-AC0 4-94AL85000.

  19. Reducing the number of parameters in 1D arterial blood flow modeling: less is more for patient-specific simulations

    PubMed Central

    Epstein, Sally; Willemet, Marie; Chowienczyk, Phil J.

    2015-01-01

    Patient-specific one-dimensional (1D) blood flow modeling requires estimating model parameters from available clinical data, ideally acquired noninvasively. The larger the number of arterial segments in a distributed 1D model, the greater the number of input parameters that need to be estimated. We investigated the effect of a reduction in the number of arterial segments in a given distributed 1D model on the shape of the simulated pressure and flow waveforms. This is achieved by systematically lumping peripheral 1D model branches into windkessel models that preserve the net resistance and total compliance of the original model. We applied our methodology to a model of the 55 larger systemic arteries in the human and to an extended 67-artery model that contains the digital arteries that perfuse the fingers. Results show good agreement in the shape of the aortic and digital waveforms between the original 55-artery (67-artery) and reduced 21-artery (37-artery) models. Reducing the number of segments also enables us to investigate the effect of arterial network topology (and hence reflection sites) on the shape of waveforms. Results show that wave reflections in the thoracic aorta and renal arteries play an important role in shaping the aortic pressure and flow waves and in generating the second peak of the digital pressure and flow waves. Our novel methodology is important to simplify the computational domain while maintaining the precision of the numerical predictions and to assess the effect of wave reflections. PMID:25888513

  20. Understanding the Rayleigh-Taylor instability through 1D and 3D simulations

    NASA Astrophysics Data System (ADS)

    Mikhaeil, Mark; Denissen, Nicholas; Ranjan, Devesh

    2015-11-01

    A series of Rayleigh-Taylor instability numerical simulations were completed using the Arbitrary Lagrangian-Eulerian hydrocode FLAG developed at Los Alamos National Laboratory. One-dimensional simulations employed a Reynolds-averaged Navier-Stokes approach with turbulence closure models selected from the Besnard-Harlow-Rauenzahn family of models. Growth rate parameters and turbulence statistics are derived from these simulations and compared between closure models. Variations from experimental results are explored and used to validate the models. The effect of density ratio on the bubble-spike growth rate asymmetry is also investigated. High resolution three-dimensional large eddy simulations (LES) are also completed and presented. LES were initialized using a multi-modal perturbation prescribed from experimental data collected at the Georgia Institute of Technology multi-layer Gas Tunnel facility. Turbulence statistics are gathered by averaging many simulations started with different initial conditions. Late time development is compared to Gas Tunnel experimental results and previous LES.

  1. Slurm: An innovative Particle-in-Cell Method for Magnetohydrodynamics

    NASA Astrophysics Data System (ADS)

    Bacchini, Fabio; Olshevsky, Vyacheslav; Lapenta, Giovanni

    2016-10-01

    We present a new Particle-in-Cell method for plasma simulations. This is based on the original algorithm of FLIP-MHD, which uses a Lagrangian formulation of the macroscopic equations. A finite-difference approximation of the equations of motion is solved on a fixed (non-moving) grid, while convection of the quantities is modelled with the support of Lagrangian particles. Interpolation with first-order b-splines is used to project the conserved quantities from particles to the grid and back. In this work, we introduce two modifications of the original scheme. A particle volume evolution procedure is adopted to reduce the computational error, based on the Material Point Method for solid mechanics. The additional step introduces little to none computational diffusion and efficiently suppresses the so-called ringing instability, allowing the use of explicit time differencing. Furthermore, we eliminate the need for a Poisson solver in the magnetic field computation with the use of a vector potential. The vector potential evolution is modelled with a moving grid and interpolated to the fixed grid points to obtain a solenoidal magnetic field. The results of a number of HD and MHD tests show good agreement with the reference solutions and rather fast time and space convergence. Air Force Office of Scientific Research, Air Force Materiel Command, USAF under Award No. FA9550-14-1-0375. European Community's Seventh Framework Programme (FP7/2007-2013) via the DEEP-ER project under Grant Agreement No. 610476.

  2. GPU Acceleration of Particle-In-Cell Methods

    NASA Astrophysics Data System (ADS)

    Cowan, Benjamin; Cary, John; Sides, Scott

    2016-10-01

    Graphics processing units (GPUs) have become key components in many supercomputing systems, as they can provide more computations relative to their cost and power consumption than conventional processors. However, to take full advantage of this capability, they require a strict programming model which involves single-instruction multiple-data execution as well as significant constraints on memory accesses. To bring the full power of GPUs to bear on plasma physics problems, we must adapt the computational methods to this new programming model. We have developed a GPU implementation of the particle-in-cell (PIC) method, one of the mainstays of plasma physics simulation. This framework is highly general and enables advanced PIC features such as high order particles and absorbing boundary conditions. The main elements of the PIC loop, including field interpolation and particle deposition, are designed to optimize memory access. We describe the performance of these algorithms and discuss some of the methods used. Work supported by DARPA Contract No. W31P4Q-16-C-0009.

  3. GPU acceleration of particle-in-cell methods

    NASA Astrophysics Data System (ADS)

    Cowan, Benjamin; Cary, John; Meiser, Dominic

    2015-11-01

    Graphics processing units (GPUs) have become key components in many supercomputing systems, as they can provide more computations relative to their cost and power consumption than conventional processors. However, to take full advantage of this capability, they require a strict programming model which involves single-instruction multiple-data execution as well as significant constraints on memory accesses. To bring the full power of GPUs to bear on plasma physics problems, we must adapt the computational methods to this new programming model. We have developed a GPU implementation of the particle-in-cell (PIC) method, one of the mainstays of plasma physics simulation. This framework is highly general and enables advanced PIC features such as high order particles and absorbing boundary conditions. The main elements of the PIC loop, including field interpolation and particle deposition, are designed to optimize memory access. We describe the performance of these algorithms and discuss some of the methods used. Work supported by DARPA contract W31P4Q-15-C-0061 (SBIR).

  4. Dynamic Simulation of 1D Cellular Automata in the Active aTAM.

    PubMed

    Jonoska, Nataša; Karpenko, Daria; Seki, Shinnosuke

    2015-07-01

    The Active aTAM is a tile based model for self-assembly where tiles are able to transfer signals and change identities according to the signals received. We extend Active aTAM to include deactivation signals and thereby allow detachment of tiles. We show that the model allows a dynamic simulation of cellular automata with assemblies that do not record the entire computational history but only the current updates of the states, and thus provide a way for (a) algorithmic dynamical structural changes in the assembly and (b) reusable space in self-assembly. The simulation is such that at a given location the sequence of tiles that attach and detach corresponds precisely to the sequence of states the synchronous cellular automaton generates at that location.

  5. Dynamic Simulation of 1D Cellular Automata in the Active aTAM

    PubMed Central

    Jonoska, Nataša; Karpenko, Daria; Seki, Shinnosuke

    2016-01-01

    The Active aTAM is a tile based model for self-assembly where tiles are able to transfer signals and change identities according to the signals received. We extend Active aTAM to include deactivation signals and thereby allow detachment of tiles. We show that the model allows a dynamic simulation of cellular automata with assemblies that do not record the entire computational history but only the current updates of the states, and thus provide a way for (a) algorithmic dynamical structural changes in the assembly and (b) reusable space in self-assembly. The simulation is such that at a given location the sequence of tiles that attach and detach corresponds precisely to the sequence of states the synchronous cellular automaton generates at that location. PMID:27789918

  6. Impact of sea spray on upper ocean temperature during typhoon passage: simulation with a 1-D turbulent model

    NASA Astrophysics Data System (ADS)

    Zhang, Lianxin; Zhang, Xuefeng; Han, Guijun; Wu, Xinrong; Cui, Xiaojian; Shao, Caixia; Sun, Chunjian; Zhang, Xiaoshuang; Wang, Xidong; Fu, Hongli

    2015-09-01

    At the interface between the lower atmosphere and sea surface, sea spray might significantly influence air-sea heat fluxes and subsequently, modulate upper ocean temperature during a typhoon passage. The effects of sea spray were introduced into the parameterization of sea surface roughness in a 1-D turbulent model, to investigate the effects of sea spray on upper ocean temperature in the Kuroshio Extension area, for the cases of two real typhoons from 2006, Yagi and Soulik. Model output was compared with data from the Kuroshio Extension Observatory (KEO), and Reynolds and AMSRE satellite remote sensing sea surface temperatures. The results indicate drag coefficients that include the spray effect are closer to observations than those without, and that sea spray can enhance the heat fluxes (especially latent heat flux) considerably during a typhoon passage. Consequently, the model results with heat fluxes enhanced by sea spray simulate better the cooling process of the SST and upper-layer temperature profiles. Additionally, results from the simulation of the passage of typhoon Soulik (that passed KEO quickly), which included the sea spray effect, were better than for the simulated passage of typhoon Yagi (that crossed KEO slowly). These promising 1-D results could provide insight into the application of sea spray in general circulation models for typhoon studies.

  7. Electrophysiological and Structural Remodeling in Heart Failure Modulate Arrhythmogenesis. 1D Simulation Study

    PubMed Central

    Gomez, Juan F.; Cardona, Karen; Romero, Lucia; Ferrero, Jose M.; Trenor, Beatriz

    2014-01-01

    Background Heart failure is a final common pathway or descriptor for various cardiac pathologies. It is associated with sudden cardiac death, which is frequently caused by ventricular arrhythmias. Electrophysiological remodeling, intercellular uncoupling, fibrosis and autonomic imbalance have been identified as major arrhythmogenic factors in heart failure etiology and progression. Objective In this study we investigate in silico the role of electrophysiological and structural heart failure remodeling on the modulation of key elements of the arrhythmogenic substrate, i.e., electrophysiological gradients and abnormal impulse propagation. Methods Two different mathematical models of the human ventricular action potential were used to formulate models of the failing ventricular myocyte. This provided the basis for simulations of the electrical activity within a transmural ventricular strand. Our main goal was to elucidate the roles of electrophysiological and structural remodeling in setting the stage for malignant life-threatening arrhythmias. Results Simulation results illustrate how the presence of M cells and heterogeneous electrophysiological remodeling in the human failing ventricle modulate the dispersion of action potential duration and repolarization time. Specifically, selective heterogeneous remodeling of expression levels for the Na+/Ca2+ exchanger and SERCA pump decrease these heterogeneities. In contrast, fibroblast proliferation and cellular uncoupling both strongly increase repolarization heterogeneities. Conduction velocity and the safety factor for conduction are also reduced by the progressive structural remodeling during heart failure. Conclusion An extensive literature now establishes that in human ventricle, as heart failure progresses, gradients for repolarization are changed significantly by protein specific electrophysiological remodeling (either homogeneous or heterogeneous). Our simulations illustrate and provide new insights into this

  8. H/V ratio: a tool for site effects evaluation. Results from 1-D noise simulations

    NASA Astrophysics Data System (ADS)

    Bonnefoy-Claudet, Sylvette; Cornou, Cécile; Bard, Pierre-Yves; Cotton, Fabrice; Moczo, Peter; Kristek, Jozef; Fäh, Donat

    2006-11-01

    Ambient vibration techniques such as the H/V method may have the potential to significantly contribute to site effect evaluation, particularly in urban areas. Previous studies interpret the so-called Nakamura's technique in relation to the ellipticity ratio of Rayleigh waves, which, for a high enough impedance contrast, exhibits a pronounced peak close to the fundamental S-wave resonance frequency. Within the European SESAME project (Site EffectS assessment using AMbient Excitations) this interpretation has been tested through noise numerical simulation under well-controlled conditions in terms of source type and distribution and propagation structure. We will present simulations for a simple realistic site (one sedimentary layer over bedrock) characterized by a rather high impedance contrast and low quality factor. Careful H/V and array analysis on these noise synthetics allow an in-depth investigation of the link between H/V ratio peaks and the noise wavefield composition for the soil model considered here: (1) when sources are near (4 to 50 times the layer thickness) and surficial, H/V curves exhibit one single peak, while the array analysis shows that the wavefield is dominated by Rayleigh waves; (2) when sources are distant (more than 50 times the layer thickness) and located inside the sedimentary layer, two peaks show up on the H/V curve, while the array analysis indicates both Rayleigh waves and strong S head waves; the first peak is due to both fundamental Rayleigh waves and resonance of head S waves, the second is only due to the resonance of head S waves; (3) when sources are deep (located inside the bedrock), whatever their distance, H/V ratio exhibit peaks at the fundamental and harmonic resonance frequencies, while array analyses indicate only non-dispersive body waves; the H/V is thus simply due to multiple reflections of S waves within the layer. Therefore, considering that experimental H/V ratio (i.e. derived from actual noise measured in the field

  9. Impact of Variations on 1-D Flow in Gas Turbine Engines via Monte Carlo Simulations

    NASA Technical Reports Server (NTRS)

    Ngo, Khiem Viet; Tumer, Irem

    2004-01-01

    The unsteady compressible inviscid flow is characterized by the conservations of mass, momentum, and energy; or simply the Euler equations. In this paper, a study of the subsonic one-dimensional Euler equations with local preconditioning is presented using a modal analysis approach. Specifically, this study investigates the behavior of airflow in a gas turbine engine using the specified conditions at the inflow and outflow boundaries of the compressor, combustion chamber, and turbine, to determine the impact of variations in pressure, velocity, temperature, and density at low Mach numbers. Two main questions motivate this research: 1) Is there any aerodynamic problem with the existing gas turbine engines that could impact aircraft performance? 2) If yes, what aspect of a gas turbine engine could be improved via design to alleviate that impact and to optimize aircraft performance? This paper presents an initial attempt to model the flow behavior in terms of their eigenfrequencies subject to the assumption of the uncertainty or variation (perturbation). The flow behavior is explored using simulation outputs from a customer-deck model obtained from Pratt & Whitney. Variations of the main variables (i.e., pressure, temperature, velocity, density) about their mean states at the inflow and outflow boundaries of the compressor, combustion chamber, and turbine are modeled. Flow behavior is analyzed for the high-pressure compressor and combustion chamber utilizing the conditions on their left and right boundaries. In the same fashion, similar analyses are carried out for the high-pressure and low-pressure turbines. In each case, the eigenfrequencies that are obtained for different boundary conditions are examined closely based on their probabilistic distributions, a result of a Monte Carlo 10,000 sample simulation. Furthermore, the characteristic waves and wave response are analyzed and contrasted among different cases, with and without preconditioners. The results reveal

  10. Linking 1D evolutionary to 3D hydrodynamical simulations of massive stars

    NASA Astrophysics Data System (ADS)

    Cristini, A.; Meakin, C.; Hirschi, R.; Arnett, D.; Georgy, C.; Viallet, M.

    2016-03-01

    Stellar evolution models of massive stars are important for many areas of astrophysics, for example nucleosynthesis yields, supernova progenitor models and understanding physics under extreme conditions. Turbulence occurs in stars primarily due to nuclear burning at different mass coordinates within the star. The understanding and correct treatment of turbulence and turbulent mixing at convective boundaries in stellar models has been studied for decades but still lacks a definitive solution. This paper presents initial results of a study on convective boundary mixing (CBM) in massive stars. The ‘stiffness’ of a convective boundary can be quantified using the bulk Richardson number ({{Ri}}{{B}}), the ratio of the potential energy for restoration of the boundary to the kinetic energy of turbulent eddies. A ‘stiff’ boundary ({{Ri}}{{B}}˜ {10}4) will suppress CBM, whereas in the opposite case a ‘soft’ boundary ({{Ri}}{{B}}˜ 10) will be more susceptible to CBM. One of the key results obtained so far is that lower convective boundaries (closer to the centre) of nuclear burning shells are ‘stiffer’ than the corresponding upper boundaries, implying limited CBM at lower shell boundaries. This is in agreement with 3D hydrodynamic simulations carried out by Meakin and Arnett (2007 Astrophys. J. 667 448-75). This result also has implications for new CBM prescriptions in massive stars as well as for nuclear burning flame front propagation in super-asymptotic giant branch stars and also the onset of novae.

  11. 1D simulation of runaway electrons generation in pulsed high-pressure gas discharge

    NASA Astrophysics Data System (ADS)

    Kozhevnikov, V. Yu.; Kozyrev, A. V.; Semeniuk, N. S.

    2015-10-01

    The results of theoretical modelling of runaway electron generation in the high-pressure nanosecond pulsed gas discharge are presented. A novel hybrid model of gas discharge has been successfully built. Hydrodynamic and kinetic approaches are used simultaneously to describe the dynamics of different components of low-temperature discharge plasma. To consider motion of ions and low-energy (plasma) electrons the corresponding equations of continuity with drift-diffusion approximation are used. To describe high-energy (runaway) electrons the Boltzmann kinetic equation is included. As a result of the simulation we obtained spatial and temporal distributions of charged particles and electric field in a pulsed discharge. Furthermore, the energy spectra calculated runaway electrons in different cross-sections, particularly, the discharge gap in the anode plane. It is shown that the average energy of fast electrons (in eV) in the anode plane is usually slightly higher than the instantaneous value of the applied voltage to the gap (in V).

  12. Understanding the colloidal dispersion stability of 1D and 2D materials: Perspectives from molecular simulations and theoretical modeling.

    PubMed

    Lin, Shangchao; Shih, Chih-Jen; Sresht, Vishnu; Govind Rajan, Ananth; Strano, Michael S; Blankschtein, Daniel

    2016-08-03

    The colloidal dispersion stability of 1D and 2D materials in the liquid phase is critical for scalable nano-manufacturing, chemical modification, composites production, and deployment as conductive inks or nanofluids. Here, we review recent computational and theoretical studies carried out by our group to model the dispersion stability of 1D and 2D materials, including single-walled carbon nanotubes, graphene, and graphene oxide in aqueous surfactant solutions or organic solvents. All-atomistic (AA) molecular dynamics (MD) simulations can probe the molecular level details of the adsorption morphology of surfactants and solvents around these materials, as well as quantify the interaction energy between the nanomaterials mediated by surfactants or solvents. Utilizing concepts from reaction kinetics and diffusion, one can directly predict the rate constants for the aggregation kinetics and dispersion life times using MD outputs. Furthermore, the use of coarse-grained (CG) MD simulations allows quantitative prediction of surfactant adsorption isotherms. Combined with the Poisson-Boltzmann equation, the Langmuir isotherm, and the DLVO theory, one can directly use CGMD outputs to: (i) predict electrostatic potentials around the nanomaterial, (ii) correlate surfactant surface coverages with surfactant concentrations in the bulk dispersion medium, and (iii) determine energy barriers against coagulation. Finally, we discuss challenges associated with studying emerging 2D materials, such as, hexagonal boron nitride (h-BN), phosphorene, and transition metal dichalcogenides (TMDCs), including molybdenum disulfide (MoS2). An outlook is provided to address these challenges with plans to develop force-field parameters for MD simulations to enable predictive modeling of emerging 2D materials in the liquid phase.

  13. Comparison of particle-in-cell simulations with experimentally observed frequency shifts between ions of the same mass-to-charge in Fourier transform ion cyclotron resonance mass spectrometry.

    PubMed

    Leach, Franklin E; Kharchenko, Andriy; Heeren, Ron M A; Nikolaev, Eugene; Amster, I Jonathan

    2010-02-01

    It has been previously observed that the measured frequency of ions in a Fourier transform mass spectrometry experiment depend upon the number of trapped ions, even for populations consisting exclusively of a single mass-to-charge. Since ions of the same mass-to-charge are thought not to exert a space-charge effect among themselves, the experimental observation of such frequency shifts raises questions about their origin. To determine the source of such experimentally observed frequency shifts, multiparticle ion trajectory simulations have been conducted on monoisotopic populations of Cs(+) ranging from 10(2) ions to 10(6) ions. A close match to experimental behavior is observed. By probing the effect of ion number and orbital radius on the shift in the cyclotron frequency, it is shown that for a monoisotopic population of ions, the frequency shift is caused by the interaction of ions with their image-charge. The addition of ions of a second mass-to-charge to the simulation allows the comparison of the magnitude of the frequency shift resulting from space-charge (ion-ion) effects versus ion interactions with their image charge.

  14. Electromagnetic particle in cell modeling of the plasma focus: Current sheath formation and lift off

    SciTech Connect

    Seng, Y. S.; Lee, P.; Rawat, R. S.

    2014-02-15

    The shaping and formation of the current sheath takes place in the breakdown phase of a plasma focus device and critically controls the device performance. Electrostatic particle in cell codes, with magnetic effects ignored, have been used to model the breakdown phase. This Letter reports the successful development and implementation of an electromagnetic particle in cell (EMPIC) code, including magnetic effects self-consistently, to simulate the breakdown phase; from the ionization, localization and gliding discharge along the insulator to the time instant of current sheath lift off. The magnetic field was found to be appreciable from the time the current sheath came into contact with the anode with increased local current, initiating the voltage breakdown of the device as a result.

  15. Satellite-derived light extinction coefficient and its impact on thermal structure simulations in a 1-D lake model

    NASA Astrophysics Data System (ADS)

    Zolfaghari, Kiana; Duguay, Claude R.; Kheyrollah Pour, Homa

    2017-01-01

    A global constant value of the extinction coefficient (Kd) is usually specified in lake models to parameterize water clarity. This study aimed to improve the performance of the 1-D freshwater lake (FLake) model using satellite-derived Kd for Lake Erie. The CoastColour algorithm was applied to MERIS satellite imagery to estimate Kd. The constant (0.2 m-1) and satellite-derived Kd values as well as radiation fluxes and meteorological station observations were then used to run FLake for a meteorological station on Lake Erie. Results improved compared to using the constant Kd value (0.2 m-1). No significant improvement was found in FLake-simulated lake surface water temperature (LSWT) when Kd variations in time were considered using a monthly average. Therefore, results suggest that a time-independent, lake-specific, and constant satellite-derived Kd value can reproduce LSWT with sufficient accuracy for the Lake Erie station. A sensitivity analysis was also performed to assess the impact of various Kd values on the simulation outputs. Results show that FLake is sensitive to variations in Kd to estimate the thermal structure of Lake Erie. Dark waters result in warmer spring and colder fall temperatures compared to clear waters. Dark waters always produce colder mean water column temperature (MWCT) and lake bottom water temperature (LBWT), shallower mixed layer depth (MLD), longer ice cover duration, and thicker ice. The sensitivity of FLake to Kd variations was more pronounced in the simulation of MWCT, LBWT, and MLD. The model was particularly sensitive to Kd values below 0.5 m-1. This is the first study to assess the value of integrating Kd from the satellite-based CoastColour algorithm into the FLake model. Satellite-derived Kd is found to be a useful input parameter for simulations with FLake and possibly other lake models, and it has potential for applicability to other lakes where Kd is not commonly measured.

  16. Particle-In-Cell modeling of Fast Ignition experiments on the Titan Laser

    NASA Astrophysics Data System (ADS)

    Link, Anthony; Akli, K. U.; Beg, F.; Chen, C. D.; Davies, J. R.; Freeman, R. R.; Kemp, G. E.; Li, K.; McLean, H. S.; Morace, A.; Patel, P. K.; Schumacher, D. W.; Sorokovikova, A. V.; Stephens, R.; Streeter, M. J. V.; Wertepny, D.; Westhover, B.

    2012-10-01

    We report on particle-in-cell-modeling (PIC) of fast ignition experiments conducted on the Titan laser. The Titan laser was used to irradiate multilayer planar targets at intensities greater than 10^20 Wcm-2 to diagnose the laser to electron coupling, electron beam divergence, and energy spectrum of the hot electrons at relativistic intensities. Hot electron beam properties were inferred through buried fluors, escaping electrons and bremsstrahlung measurements. The PIC simulations of the experiment were conducted in two stages: a high resolution laser plasma interaction (LPI) simulation using measured on shot laser parameters but with a subscale target; and a lower resolution transport simulation containing the full scale multilayer target. The transport simulation utilized the electron source based on the output of the LPI simulation and included necessary models to simulate the experimental diagnostics. Comparison of the predicted electron source properties and the experimental data will be presented.

  17. A numerical method of reduced complexity for simulating vascular hemodynamics using coupled 0D lumped and 1D wave propagation models.

    PubMed

    Kroon, Wilco; Huberts, Wouter; Bosboom, Marielle; van de Vosse, Frans

    2012-01-01

    A computational method of reduced complexity is developed for simulating vascular hemodynamics by combination of one-dimensional (1D) wave propagation models for the blood vessels with zero-dimensional (0D) lumped models for the microcirculation. Despite the reduced dimension, current algorithms used to solve the model equations and simulate pressure and flow are rather complex, thereby limiting acceptance in the medical field. This complexity mainly arises from the methods used to combine the 1D and the 0D model equations. In this paper a numerical method is presented that no longer requires additional coupling methods and enables random combinations of 1D and 0D models using pressure as only state variable. The method is applied to a vascular tree consisting of 60 major arteries in the body and the head. Simulated results are realistic. The numerical method is stable and shows good convergence.

  18. A 1D-ecosystem model for pelagic waters in the southern Baltic Sea. Numerical simulations (future decades)

    NASA Astrophysics Data System (ADS)

    Dzierzbicka-Glowacka, L.; Maciejewska, A.; Osiński, R.; Jakacki, J.; Jędrasik, J.

    2009-04-01

    This paper presents a one-dimensional Ecosystem Model. Mathematically, the pelagic variables in the model are described by a second-order partial differential equation of the diffusion type with biogeochemical sources and sinks. The temporal changes in the phytoplankton biomass are caused by primary production, respiration, mortality, grazing by zooplankton and sinking. The zooplankton biomass is affected by ingestion, excretion, respiration, fecal production, mortality, and carnivorous grazing. The changes in the pelagic detritus concentration are determined by input of: dead phytoplankton and zooplankton, natural mortality of predators, fecal pellets, and sinks: sedimentation, zooplankton grazing and decomposition. The nutrient concentration is caused by nutrient release, zooplankton excretion, predator excretion, detritus decomposition and benthic regeneration as sources and by nutrient uptake by phytoplankton as sinks. However, the benthic detritus is described by phytoplankton sedimentation, detritus sedimentation and remineralisation. The particulate organic carbon concentration is determined as the sum of phytoplankton, zooplankton and dead organic matter (detritus) concentrations. The 1D ecosystem model was used to simulate the seasonal dynamics of pelagic variables (phytoplankton, zooplankton, pelagic detritus and POC) in the southern Baltic Sea (Gdańsk Deep, Bornholm Deep and Gotland Deep). The calculations were made assuming: 1) increase in the water temperature in the upper layer - 0.008oC per year, 2) increase in the available light - 0.2% per year. Based on this trend, daily, monthly and seasonal and annual variability of phytoplankton, zooplankton, pelagic detritus and particulate organic carbon in different areas of the southern Baltic Sea (Gdańsk Deep, Borrnholm Deep and Gotland Deep) in the euphotic layer was calculated for the years: 2000, 2010, 2020, 2030, 2040 and 2050.

  19. A 2-D Implicit, Energy and Charge Conserving Particle In Cell Method

    SciTech Connect

    McPherson, Allen L.; Knoll, Dana A.; Cieren, Emmanuel B.; Feltman, Nicolas; Leibs, Christopher A.; McCarthy, Colleen; Murthy, Karthik S.; Wang, Yijie

    2012-09-10

    Recently, a fully implicit electrostatic 1D charge- and energy-conserving particle-in-cell algorithm was proposed and implemented by Chen et al ([2],[3]). Central to the algorithm is an advanced particle pusher. Particles are moved using an energy conserving scheme and are forced to stop at cell faces to conserve charge. Moreover, a time estimator is used to control errors in momentum. Here we implement and extend this advanced particle pusher to include 2D and electromagnetic fields. Derivations of all modifications made are presented in full. Special consideration is taken to ensure easy coupling into the implicit moment based method proposed by Taitano et al [19]. Focus is then given to optimizing the presented particle pusher on emerging architectures. Two multicore implementations, and one GPU (Graphics Processing Unit) implementation are discussed and analyzed.

  20. Load-balancing techniques for a parallel electromagnetic particle-in-cell code

    SciTech Connect

    PLIMPTON,STEVEN J.; SEIDEL,DAVID B.; PASIK,MICHAEL F.; COATS,REBECCA S.

    2000-01-01

    QUICKSILVER is a 3-d electromagnetic particle-in-cell simulation code developed and used at Sandia to model relativistic charged particle transport. It models the time-response of electromagnetic fields and low-density-plasmas in a self-consistent manner: the fields push the plasma particles and the plasma current modifies the fields. Through an LDRD project a new parallel version of QUICKSILVER was created to enable large-scale plasma simulations to be run on massively-parallel distributed-memory supercomputers with thousands of processors, such as the Intel Tflops and DEC CPlant machines at Sandia. The new parallel code implements nearly all the features of the original serial QUICKSILVER and can be run on any platform which supports the message-passing interface (MPI) standard as well as on single-processor workstations. This report describes basic strategies useful for parallelizing and load-balancing particle-in-cell codes, outlines the parallel algorithms used in this implementation, and provides a summary of the modifications made to QUICKSILVER. It also highlights a series of benchmark simulations which have been run with the new code that illustrate its performance and parallel efficiency. These calculations have up to a billion grid cells and particles and were run on thousands of processors. This report also serves as a user manual for people wishing to run parallel QUICKSILVER.

  1. photon-plasma: A modern high-order particle-in-cell code

    SciTech Connect

    Haugbølle, Troels; Frederiksen, Jacob Trier; Nordlund, Åke

    2013-06-15

    We present the photon-plasma code, a modern high order charge conserving particle-in-cell code for simulating relativistic plasmas. The code is using a high order implicit field solver and a novel high order charge conserving interpolation scheme for particle-to-cell interpolation and charge deposition. It includes powerful diagnostics tools with on-the-fly particle tracking, synthetic spectra integration, 2D volume slicing, and a new method to correctly account for radiative cooling in the simulations. A robust technique for imposing (time-dependent) particle and field fluxes on the boundaries is also presented. Using a hybrid OpenMP and MPI approach, the code scales efficiently from 8 to more than 250.000 cores with almost linear weak scaling on a range of architectures. The code is tested with the classical benchmarks particle heating, cold beam instability, and two-stream instability. We also present particle-in-cell simulations of the Kelvin-Helmholtz instability, and new results on radiative collisionless shocks.

  2. Relationships between Th1 or Th2 iNKT Cell Activity and Structures of CD1d-Antigen Complexes: Meta-analysis of CD1d-Glycolipids Dynamics Simulations

    PubMed Central

    Laurent, Xavier; Renault, Nicolas; Farce, Amaury; Chavatte, Philippe; Hénon, Eric

    2014-01-01

    A number of potentially bioactive molecules can be found in nature. In particular, marine organisms are a valuable source of bioactive compounds. The activity of an α-galactosylceramide was first discovered in 1993 via screening of a Japanese marine sponge (Agelas mauritanius). Very rapidly, a synthetic glycololipid analogue of this natural molecule was discovered, called KRN7000. Associated with the CD1d protein, this α-galactosylceramide 1 (KRN7000) interacts with the T-cell antigen receptor to form a ternary complex that yields T helper (Th) 1 and Th2 responses with opposing effects. In our work, we carried out molecular dynamics simulations (11.5 µs in total) involving eight different ligands (conducted in triplicate) in an effort to find out correlation at the molecular level, if any, between chemical modulation of 1 and the orientation of the known biological response, Th1 or Th2. Comparative investigations of human versus mouse and Th1 versus Th2 data have been carried out. A large set of analysis tools was employed including free energy landscapes. One major result is the identification of a specific conformational state of the sugar polar head, which could be correlated, in the present study, to the biological Th2 biased response. These theoretical tools provide a structural basis for predicting the very different dynamical behaviors of α-glycosphingolipids in CD1d and might aid in the future design of new analogues of 1. PMID:25376021

  3. A three-dimensional electrostatic particle-in-cell methodology on unstructured Delaunay-Voronoi grids

    SciTech Connect

    Gatsonis, Nikolaos A. Spirkin, Anton

    2009-06-01

    The mathematical formulation and computational implementation of a three-dimensional particle-in-cell methodology on unstructured Delaunay-Voronoi tetrahedral grids is presented. The method allows simulation of plasmas in complex domains and incorporates the duality of the Delaunay-Voronoi in all aspects of the particle-in-cell cycle. Charge assignment and field interpolation weighting schemes of zero- and first-order are formulated based on the theory of long-range constraints. Electric potential and fields are derived from a finite-volume formulation of Gauss' law using the Voronoi-Delaunay dual. Boundary conditions and the algorithms for injection, particle loading, particle motion, and particle tracking are implemented for unstructured Delaunay grids. Error and sensitivity analysis examines the effects of particles/cell, grid scaling, and timestep on the numerical heating, the slowing-down time, and the deflection times. The problem of current collection by cylindrical Langmuir probes in collisionless plasmas is used for validation. Numerical results compare favorably with previous numerical and analytical solutions for a wide range of probe radius to Debye length ratios, probe potentials, and electron to ion temperature ratios. The versatility of the methodology is demonstrated with the simulation of a complex plasma microsensor, a directional micro-retarding potential analyzer that includes a low transparency micro-grid.

  4. A reduced-order model based on the coupled 1D-3D finite element simulations for an efficient analysis of hemodynamics problems

    NASA Astrophysics Data System (ADS)

    Soudah, Eduardo; Rossi, Riccardo; Idelsohn, Sergio; Oñate, Eugenio

    2014-10-01

    A reduced-order model for an efficient analysis of cardiovascular hemodynamics problems using multiscale approach is presented in this work. Starting from a patient-specific computational mesh obtained by medical imaging techniques, an analysis methodology based on a two-step automatic procedure is proposed. First a coupled 1D-3D Finite Element Simulation is performed and the results are used to adjust a reduced-order model of the 3D patient-specific area of interest. Then, this reduced-order model is coupled with the 1D model. In this way, three-dimensional effects are accounted for in the 1D model in a cost effective manner, allowing fast computation under different scenarios. The methodology proposed is validated using a patient-specific aortic coarctation model under rest and non-rest conditions.

  5. Development of a relativistic Particle In Cell code PARTDYN for linear accelerator beam transport

    NASA Astrophysics Data System (ADS)

    Phadte, D.; Patidar, C. B.; Pal, M. K.

    2017-04-01

    A relativistic Particle In Cell (PIC) code PARTDYN is developed for the beam dynamics simulation of z-continuous and bunched beams. The code is implemented in MATLAB using its MEX functionality which allows both ease of development as well higher performance similar to a compiled language like C. The beam dynamics calculations carried out by the code are compared with analytical results and with other well developed codes like PARMELA and BEAMPATH. The effect of finite number of simulation particles on the emittance growth of intense beams has been studied. Corrections to the RF cavity field expressions were incorporated in the code so that the fields could be calculated correctly. The deviations of the beam dynamics results between PARTDYN and BEAMPATH for a cavity driven in zero-mode have been discussed. The beam dynamics studies of the Low Energy Beam Transport (LEBT) using PARTDYN have been presented.

  6. Balancing Particle and Mesh Computation in a Particle-In-Cell Code

    SciTech Connect

    Worley, Patrick H; D'Azevedo, Eduardo; Hager, Robert; Ku, Seung-Hoe; Yoon, Eisung; Chang, C. S.

    2016-01-01

    The XGC1 plasma microturbulence particle-in-cell simulation code has both particle-based and mesh-based computational kernels that dominate performance. Both of these are subject to load imbalances that can degrade performance and that evolve during a simulation. Each separately can be addressed adequately, but optimizing just for one can introduce significant load imbalances in the other, degrading overall performance. A technique has been developed based on Golden Section Search that minimizes wallclock time given prior information on wallclock time, and on current particle distribution and mesh cost per cell, and also adapts to evolution in load imbalance in both particle and mesh work. In problems of interest this doubled the performance on full system runs on the XK7 at the Oak Ridge Leadership Computing Facility compared to load balancing only one of the kernels.

  7. Ice Concentration Retrieval in Stratiform Mixed-phase Clouds Using Cloud Radar Reflectivity Measurements and 1D Ice Growth Model Simulations

    SciTech Connect

    Zhang, Damao; Wang, Zhien; Heymsfield, Andrew J.; Fan, Jiwen; Luo, Tao

    2014-10-01

    Measurement of ice number concentration in clouds is important but still challenging. Stratiform mixed-phase clouds (SMCs) provide a simple scenario for retrieving ice number concentration from remote sensing measurements. The simple ice generation and growth pattern in SMCs offers opportunities to use cloud radar reflectivity (Ze) measurements and other cloud properties to infer ice number concentration quantitatively. To understand the strong temperature dependency of ice habit and growth rate quantitatively, we develop a 1-D ice growth model to calculate the ice diffusional growth along its falling trajectory in SMCs. The radar reflectivity and fall velocity profiles of ice crystals calculated from the 1-D ice growth model are evaluated with the Atmospheric Radiation Measurements (ARM) Climate Research Facility (ACRF) ground-based high vertical resolution radar measurements. Combining Ze measurements and 1-D ice growth model simulations, we develop a method to retrieve the ice number concentrations in SMCs at given cloud top temperature (CTT) and liquid water path (LWP). The retrieved ice concentrations in SMCs are evaluated with in situ measurements and with a three-dimensional cloud-resolving model simulation with a bin microphysical scheme. These comparisons show that the retrieved ice number concentrations are within an uncertainty of a factor of 2, statistically.

  8. Exactly energy conserving semi-implicit particle in cell formulation

    NASA Astrophysics Data System (ADS)

    Lapenta, Giovanni

    2017-04-01

    We report a new particle in cell (PIC) method based on the semi-implicit approach. The novelty of the new method is that unlike any of its semi-implicit predecessors at the same time it retains the explicit computational cycle and conserves energy exactly. Recent research has presented fully implicit methods where energy conservation is obtained as part of a non-linear iteration procedure. The new method (referred to as Energy Conserving Semi-Implicit Method, ECSIM), instead, does not require any non-linear iteration and its computational cycle is similar to that of explicit PIC. The properties of the new method are: i) it conserves energy exactly to round-off for any time step or grid spacing; ii) it is unconditionally stable in time, freeing the user from the need to resolve the electron plasma frequency and allowing the user to select any desired time step; iii) it eliminates the constraint of the finite grid instability, allowing the user to select any desired resolution without being forced to resolve the Debye length; iv) the particle mover has a computational complexity identical to that of the explicit PIC, only the field solver has an increased computational cost. The new ECSIM is tested in a number of benchmarks where accuracy and computational performance are tested.

  9. Second order gyrokinetic theory for particle-in-cell codes

    NASA Astrophysics Data System (ADS)

    Tronko, Natalia; Bottino, Alberto; Sonnendrücker, Eric

    2016-08-01

    The main idea of the gyrokinetic dynamical reduction consists in a systematical removal of the fast scale motion (the gyromotion) from the dynamics of the plasma, resulting in a considerable simplification and a significant gain of computational time. The gyrokinetic Maxwell-Vlasov equations are nowadays implemented in for modeling (both laboratory and astrophysical) strongly magnetized plasmas. Different versions of the reduced set of equations exist, depending on the construction of the gyrokinetic reduction procedure and the approximations performed in the derivation. The purpose of this article is to explicitly show the connection between the general second order gyrokinetic Maxwell-Vlasov system issued from the modern gyrokinetic theory and the model currently implemented in the global electromagnetic Particle-in-Cell code ORB5. Necessary information about the modern gyrokinetic formalism is given together with the consistent derivation of the gyrokinetic Maxwell-Vlasov equations from first principles. The variational formulation of the dynamics is used to obtain the corresponding energy conservation law, which in turn is used for the verification of energy conservation diagnostics currently implemented in ORB5. This work fits within the context of the code verification project VeriGyro currently run at IPP Max-Planck Institut in collaboration with others European institutions.

  10. Laser-plasma interactions with a Fourier-Bessel particle-in-cell method

    NASA Astrophysics Data System (ADS)

    Andriyash, Igor A.; Lehe, Remi; Lifschitz, Agustin

    2016-03-01

    A new spectral particle-in-cell (PIC) method for plasma modeling is presented and discussed. In the proposed scheme, the Fourier-Bessel transform is used to translate the Maxwell equations to the quasi-cylindrical spectral domain. In this domain, the equations are solved analytically in time, and the spatial derivatives are approximated with high accuracy. In contrast to the finite-difference time domain (FDTD) methods, that are used commonly in PIC, the developed method does not produce numerical dispersion and does not involve grid staggering for the electric and magnetic fields. These features are especially valuable in modeling the wakefield acceleration of particles in plasmas. The proposed algorithm is implemented in the code PLARES-PIC, and the test simulations of laser plasma interactions are compared to the ones done with the quasi-cylindrical FDTD PIC code CALDER-CIRC.

  11. CPIC: A Parallel Particle-In-Cell Code for Studying Spacecraft Charging

    NASA Astrophysics Data System (ADS)

    Meierbachtol, Collin; Delzanno, Gian Luca; Moulton, David; Vernon, Louis

    2015-11-01

    CPIC is a three-dimensional electrostatic particle-in-cell code designed for use with curvilinear meshes. One of its primary objectives is to aid in studying spacecraft charging in the magnetosphere. CPIC maintains near-optimal computational performance and scaling thanks to a mapped logical mesh field solver, and a hybrid physical-logical space particle mover (avoiding the need to track particles). CPIC is written for parallel execution, utilizing a combination of both OpenMP threading and MPI distributed memory. New capabilities are being actively developed and added to CPIC, including the ability to handle multi-block curvilinear mesh structures. Verification results comparing CPIC to analytic test problems will be provided. Particular emphasis will be placed on the charging and shielding of a sphere-in-plasma system. Simulated charging results of representative spacecraft geometries will also be presented. Finally, its performance capabilities will be demonstrated through parallel scaling data.

  12. Extended particle-in-cell schemes for physics in ultrastrong laser fields: Review and developments.

    PubMed

    Gonoskov, A; Bastrakov, S; Efimenko, E; Ilderton, A; Marklund, M; Meyerov, I; Muraviev, A; Sergeev, A; Surmin, I; Wallin, E

    2015-08-01

    We review common extensions of particle-in-cell (PIC) schemes which account for strong field phenomena in laser-plasma interactions. After describing the physical processes of interest and their numerical implementation, we provide solutions for several associated methodological and algorithmic problems. We propose a modified event generator that precisely models the entire spectrum of incoherent particle emission without any low-energy cutoff, and which imposes close to the weakest possible demands on the numerical time step. Based on this, we also develop an adaptive event generator that subdivides the time step for locally resolving QED events, allowing for efficient simulation of cascades. Further, we present a unified technical interface for including the processes of interest in different PIC implementations. Two PIC codes which support this interface, PICADOR and ELMIS, are also briefly reviewed.

  13. Extended particle-in-cell schemes for physics in ultrastrong laser fields: Review and developments

    NASA Astrophysics Data System (ADS)

    Gonoskov, A.; Bastrakov, S.; Efimenko, E.; Ilderton, A.; Marklund, M.; Meyerov, I.; Muraviev, A.; Sergeev, A.; Surmin, I.; Wallin, E.

    2015-08-01

    We review common extensions of particle-in-cell (PIC) schemes which account for strong field phenomena in laser-plasma interactions. After describing the physical processes of interest and their numerical implementation, we provide solutions for several associated methodological and algorithmic problems. We propose a modified event generator that precisely models the entire spectrum of incoherent particle emission without any low-energy cutoff, and which imposes close to the weakest possible demands on the numerical time step. Based on this, we also develop an adaptive event generator that subdivides the time step for locally resolving QED events, allowing for efficient simulation of cascades. Further, we present a unified technical interface for including the processes of interest in different PIC implementations. Two PIC codes which support this interface, picador and elmis, are also briefly reviewed.

  14. Hamiltonian particle-in-cell methods for Vlasov-Maxwell equations

    NASA Astrophysics Data System (ADS)

    He, Yang; Sun, Yajuan; Qin, Hong; Liu, Jian

    2016-09-01

    In this paper, we study the Vlasov-Maxwell equations based on the Morrison-Marsden-Weinstein bracket. We develop Hamiltonian particle-in-cell methods for this system by employing finite element methods in space and splitting methods in time. In order to derive the semi-discrete system that possesses a discrete non-canonical Poisson structure, we present a criterion for choosing the appropriate finite element spaces. It is confirmed that some conforming elements, e.g., Nédélec's mixed elements, satisfy this requirement. When the Hamiltonian splitting method is used to discretize this semi-discrete system in time, the resulting algorithm is explicit and preserves the discrete Poisson structure. The structure-preserving nature of the algorithm ensures accuracy and fidelity of the numerical simulations over long time.

  15. Comparing Particle-in-Cell QED Models for High-Intensity Laser-Plasma Interactions

    NASA Astrophysics Data System (ADS)

    Luedtke, Scott V.; Labun, Lance A.; Hegelich, Björn Manuel

    2016-10-01

    High-intensity lasers, such as the Texas Petawatt, are pushing into new regimes of laser-matter interaction, requiring continuing improvement and inclusion of new physics effects in computer simulations. Experiments at the Texas Petawatt are reaching intensity regimes where new physics-quantum electrodynamics (QED) corrections to otherwise classical plasma dynamics-becomes important. We have two particle-in-cell (PIC) codes with different QED implementations. We review the theory of photon emission in QED-strong fields, and cover the differing PIC implementations. We show predictions from the two codes and compare with ongoing experiments. This work was supported by NNSA cooperative agreement DE-NA0002008, the Defense Advanced Research Projects Agency's PULSE program (12-63-PULSE-FP014) and the Air Force Office of Scientific Research (FA9550-14-1-0045). HPC resources provided by TACC.

  16. Data of the recombination loss mechanisms analysis on Al2O3 PERC cell using PC1D and PC2D simulations.

    PubMed

    Huang, Haibing; Lv, Jun; Bao, Yameng; Xuan, Rongwei; Sun, Shenghua; Sneck, Sami; Li, Shuo; Modanese, Chiara; Savin, Hele; Wang, Aihua; Zhao, Jianhua

    2017-04-01

    This data article is related to our recently published article ('20.8% industrial PERC solar cell: ALD Al2O3 rear surface passivation, efficiency loss mechanisms analysis and roadmap to 24%', Huang et al., 2017 [1]) where we have presented a systematic evaluation of the overall cell processing and a cost-efficient industrial roadmap for PERC cells. Aside from the information already presented in Huang et al., 2017 [1], here we provide data related to Sectin 3 in Huang et al., 2017 [1] concerning the analysis of the recombination losses׳ mechanisms by PC1D V5.9 and PC2D simulations (Clugston and Basore, 1997, Basore and Cabanas-Holmen, 2011, Cabanas-Holmen and Basore, 2012 and Cabanas-Holmen and Basore, 2012.) [2], [3], [4], [5] on our current industrial Al2O3 PERC cell. The data include: i) PC2D simulations on J02, ii) the calculation of series resistance and back surface recombination velocity (BSRV) on the rear side metallization of PERC cell for the case of a point contact, and iii) the PC1D simulation on the cumulative photo-generation and recombination along the distance from the front surface. Finally, the roadmap of the solar cell efficiency for an industrial PERC technology up to 24% is presented, with the aim of providing a potential guideline for industrial researchers.

  17. Particle in cell/Monte Carlo collision analysis of the problem of identification of impurities in the gas by the plasma electron spectroscopy method

    NASA Astrophysics Data System (ADS)

    Kusoglu Sarikaya, C.; Rafatov, I.; Kudryavtsev, A. A.

    2016-06-01

    The work deals with the Particle in Cell/Monte Carlo Collision (PIC/MCC) analysis of the problem of detection and identification of impurities in the nonlocal plasma of gas discharge using the Plasma Electron Spectroscopy (PLES) method. For this purpose, 1d3v PIC/MCC code for numerical simulation of glow discharge with nonlocal electron energy distribution function is developed. The elastic, excitation, and ionization collisions between electron-neutral pairs and isotropic scattering and charge exchange collisions between ion-neutral pairs and Penning ionizations are taken into account. Applicability of the numerical code is verified under the Radio-Frequency capacitively coupled discharge conditions. The efficiency of the code is increased by its parallelization using Open Message Passing Interface. As a demonstration of the PLES method, parallel PIC/MCC code is applied to the direct current glow discharge in helium doped with a small amount of argon. Numerical results are consistent with the theoretical analysis of formation of nonlocal EEDF and existing experimental data.

  18. Effects of various types of molecular dynamics on 1D and 2D (2)H NMR studied by random walk simulations

    PubMed

    Vogel; Rossler

    2000-11-01

    By carrying out random walk simulations we systematically study the effects of various types of complex molecular dynamics on (2)H NMR experiments in solids. More precisely, we calculate one-dimensional (1D) (2)H NMR spectra and the results of two dimensional (2D) (2)H NMR experiments in time domain, taking into account isotropic as well as highly restricted motions which involve rotational jumps about different finite angles. Although the dynamical models are chosen to mimic the primary and secondary relaxation in supercooled liquids and glasses, we do not intend to describe experimental results quantitatively but rather to show general effects appearing for complex reorientations. We carefully investigate whether 2D (2)H NMR in time domain, which was originally designed to measure correlation times of ultraslow motions (tau >/= 1 ms), can be used to obtain shorter tau, too. It is demonstrated that an extension of the time window to tau >/= 10 &mgr;s is possible when dealing with exponential relaxation, but that it will fail if there is a distribution of correlation times G(lgtau). Vice versa, we show that 1D (2)H NMR spectra, usually recorded to look at dynamics with tau in the microsecond regime, are also applicable for studying ultraslow motions provided that the loss of correlation is achieved step by step. Therefore, it is useful to carry out 1D and 2D NMR experiments simultaneously in order to reveal the mechanism of complex molecular motions. In addition, we demonstrate that highly restricted dynamics can be clearly observed in 1D spectra and in 2D NMR in time domain if long solid-echo delays and large evolution times are applied, respectively. Finally, unexpected observations are described which appear in the latter experiment when considering very broad distributions G(lgtau). Because of these effects, time scale and geometry of a considered motion cannot be extracted from a straightforward analysis of experimental results. Copyright 2000 Academic Press.

  19. Pulse wave propagation in a model human arterial network: Assessment of 1-D visco-elastic simulations against in vitro measurements

    PubMed Central

    Alastruey, Jordi; Khir, Ashraf W.; Matthys, Koen S.; Segers, Patrick; Sherwin, Spencer J.; Verdonck, Pascal R.; Parker, Kim H.; Peiró, Joaquim

    2011-01-01

    The accuracy of the nonlinear one-dimensional (1-D) equations of pressure and flow wave propagation in Voigt-type visco-elastic arteries was tested against measurements in a well-defined experimental 1:1 replica of the 37 largest conduit arteries in the human systemic circulation. The parameters required by the numerical algorithm were directly measured in the in vitro setup and no data fitting was involved. The inclusion of wall visco-elasticity in the numerical model reduced the underdamped high-frequency oscillations obtained using a purely elastic tube law, especially in peripheral vessels, which was previously reported in this paper [Matthys et al., 2007. Pulse wave propagation in a model human arterial network: Assessment of 1-D numerical simulations against in vitro measurements. J. Biomech. 40, 3476–3486]. In comparison to the purely elastic model, visco-elasticity significantly reduced the average relative root-mean-square errors between numerical and experimental waveforms over the 70 locations measured in the in vitro model: from 3.0% to 2.5% (p<0.012) for pressure and from 15.7% to 10.8% (p<0.002) for the flow rate. In the frequency domain, average relative errors between numerical and experimental amplitudes from the 5th to the 20th harmonic decreased from 0.7% to 0.5% (p<0.107) for pressure and from 7.0% to 3.3% (p<10−6) for the flow rate. These results provide additional support for the use of 1-D reduced modelling to accurately simulate clinically relevant problems at a reasonable computational cost. PMID:21724188

  20. Simulation of decay heat removal by natural convection in a pool type fast reactor model-ramona-with coupled 1D/2D thermal hydraulic code system

    SciTech Connect

    Kasinathan, N.; Rajakumar, A.; Vaidyanathan, G.; Chetal, S.C.

    1995-09-01

    Post shutdown decay heat removal is an important safety requirement in any nuclear system. In order to improve the reliability of this function, Liquid metal (sodium) cooled fast breeder reactors (LMFBR) are equipped with redundant hot pool dipped immersion coolers connected to natural draught air cooled heat exchangers through intermediate sodium circuits. During decay heat removal, flow through the core, immersion cooler primary side and in the intermediate sodium circuits are also through natural convection. In order to establish the viability and validate computer codes used in making predictions, a 1:20 scale experimental model called RAMONA with water as coolant has been built and experimental simulation of decay heat removal situation has been performed at KfK Karlsruhe. Results of two such experiments have been compiled and published as benchmarks. This paper brings out the results of the numerical simulation of one of the benchmark case through a 1D/2D coupled code system, DHDYN-1D/THYC-2D and the salient features of the comparisons. Brief description of the formulations of the codes are also included.

  1. Field ionization model implemented in Particle In Cell code and applied to laser-accelerated carbon ions

    SciTech Connect

    Nuter, R.; Gremillet, L.; Lefebvre, E.; Levy, A.; Ceccotti, T.; Martin, P.

    2011-03-15

    A novel numerical modeling of field ionization in PIC (Particle In Cell) codes is presented. Based on the quasistatic approximation of the ADK (Ammosov Delone Krainov) theory and implemented through a Monte Carlo scheme, this model allows for multiple ionization processes. Two-dimensional PIC simulations are performed to analyze the cut-off energies of the laser-accelerated carbon ions measured on the UHI 10 Saclay facility. The influence of the target and the hydrocarbon pollutant composition on laser-accelerated carbon ion energies is demonstrated.

  2. A Particle-In-Cell Gun Code for Surface-Converter H- Ion Source Modeling

    NASA Astrophysics Data System (ADS)

    Chacon-Golcher, Edwin; Bowers, Kevin J.

    2007-08-01

    We present the current status of a particle-in-cell with Monte Carlo collisions (PIC-MCC) gun code under development at Los Alamos for the study of surface-converter H- ion sources. The program preserves a first-principles approach to a significant extent and simulates the production processes without ad hoc models within the plasma region. Some of its features include: solution of arbitrary electrostatic and magnetostatic fields in an axisymmetric (r,z) geometry to describe the self-consistent time evolution of a plasma; simulation of a multi-species (e-,H+,H2+,H3+,H-) plasma discharge from a neutral hydrogen gas and filament-originated seed electrons; full 2-dimensional (r,z) 3-velocity (vr,vz,vφ) dynamics for all species with exact conservation of the canonical angular momentum pφ; detailed collision physics between charged particles and neutrals and the ability to represent multiple smooth (not stair-stepped) electrodes of arbitrary shape and voltage whose surfaces may be secondary-particle emitters (H- and e-). The status of this development is discussed in terms of its physics content and current implementation details.

  3. Semiclassical modeling of quantum-mechanical multiparticle systems using parallel particle-in-cell methods

    NASA Astrophysics Data System (ADS)

    Dauger, Dean Edward

    2001-08-01

    We are successful in building a code that models many particle dynamic quantum systems by combining a semiclassical approximation of Feynman path integrals with parallel computing techniques (particle-in-cell) and numerical methods developed for simulating plasmas, establishing this approach as a viable technique for multiparticle time-dependent quantum mechanics. Run on high-performance parallel computers, this code applies semiclassical methods to simulate the time evolution of wavefunctions of many particles. We describe the analytical derivation and computational implementation of these techniques in detail. We present a study to thoroughly demonstrate the code's fidelity to quantum mechanics, resulting in innovative visualization and analysis techniques. We introduce and exhibit a method to address fermion particle statistics. We present studies of two quantum-mechanical problems: a two-electron, one- dimensional atom, resulting in high-quality extractions of one- and two-electron eigenstates, and electrostatic quasi-modes due to quantum effects in a hot electron plasma, relevant for predictions about stellar evolution. We supply discussions of alternative derivations, alternative implementations of the derivations, and an exploration of their consequences. Source code is shown throughout this dissertation. Finally, we present an extensive discussion of applications and extrapolations of this work, with suggestions for future direction.

  4. Development of a Numerical Method for Patient-Specific Cerebral Circulation Using 1D-0D Simulation of the Entire Cardiovascular System with SPECT Data.

    PubMed

    Zhang, Hao; Fujiwara, Naoya; Kobayashi, Masaharu; Yamada, Shigeki; Liang, Fuyou; Takagi, Shu; Oshima, Marie

    2016-08-01

    The detailed flow information in the circle of Willis (CoW) can facilitate a better understanding of disease progression, and provide useful references for disease treatment. We have been developing a one-dimensional-zero-dimensional (1D-0D) simulation method for the entire cardiovascular system to obtain hemodynamics information in the CoW. This paper presents a new method for applying 1D-0D simulation to an individual patient using patient-specific data. The key issue is how to adjust the deviation of physiological parameters, such as peripheral resistance, from literature data when patient-specific geometry is used. In order to overcome this problem, we utilized flow information from single photon emission computed tomography (SPECT) data. A numerical method was developed to optimize physiological parameters by adjusting peripheral cerebral resistance to minimize the difference between the resulting flow rate and the SPECT data in the efferent arteries of the CoW. The method was applied to three cases using different sets of patient-specific data in order to investigate the hemodynamics of the CoW. The resulting flow rates in the afferent arteries were compared to those of the phase-contrast magnetic resonance angiography (PC-MRA) data. Utilization of the SPECT data combined with the PC-MRA data showed a good agreement in flow rates in the afferent arteries of the CoW with those of PC-MRA data for all three cases. The results also demonstrated that application of SPECT data alone could provide the information on the ratios of flow distributions among arteries in the CoW.

  5. Particle-in-cell modeling for MJ scale dense plasma focus with varied anode shape

    SciTech Connect

    Link, A. Halvorson, C. Schmidt, A.; Hagen, E. C.; Rose, D. V.; Welch, D. R.

    2014-12-15

    Megajoule scale dense plasma focus (DPF) Z-pinches with deuterium gas fill are compact devices capable of producing 10{sup 12} neutrons per shot but past predictive models of large-scale DPF have not included kinetic effects such as ion beam formation or anomalous resistivity. We report on progress of developing a predictive DPF model by extending our 2D axisymmetric collisional kinetic particle-in-cell (PIC) simulations from the 4 kJ, 200 kA LLNL DPF to 1 MJ, 2 MA Gemini DPF using the PIC code LSP. These new simulations incorporate electrodes, an external pulsed-power driver circuit, and model the plasma from insulator lift-off through the pinch phase. To accommodate the vast range of relevant spatial and temporal scales involved in the Gemini DPF within the available computational resources, the simulations were performed using a new hybrid fluid-to-kinetic model. This new approach allows single simulations to begin in an electron/ion fluid mode from insulator lift-off through the 5-6 μs run-down of the 50+ cm anode, then transition to a fully kinetic PIC description during the run-in phase, when the current sheath is 2-3 mm from the central axis of the anode. Simulations are advanced through the final pinch phase using an adaptive variable time-step to capture the fs and sub-mm scales of the kinetic instabilities involved in the ion beam formation and neutron production. Validation assessments are being performed using a variety of different anode shapes, comparing against experimental measurements of neutron yield, neutron anisotropy and ion beam production.

  6. Whistler turbulence heating of electrons and ions: Three-dimensional particle-in-cell simuations

    DOE PAGES

    Gary, S. Peter; Hughes, R. Scott; Wang, Joseph

    2016-01-14

    In this study, the decay of whistler turbulence in a collisionless, homogeneous, magnetized plasma is studied using three-dimensional particle-in-cell simulations. The simulations are initialized with a narrowband, relatively isotropic distribution of long wavelength whistler modes. A first ensemble of simulations at electron betamore » $${\\beta }_{{\\rm{e}}}$$ = 0.25 and ion-to-electron mass ratio $${m}_{{\\rm{i}}}$$/$${m}_{{\\rm{e}}}$$ = 400 is carried out on a domain cube of dimension $$L{\\omega }_{\\mathrm{pi}}$$/c = 5.12 where $${\\omega }_{\\mathrm{pi}}$$ is the ion plasma frequency. The simulations begin with a range of dimensionless fluctuating field energy densities, $${\\epsilon }_{{\\rm{o}}}$$, and follow the fluctuations as they cascade to broadband, anisotropic turbulence which dissipates at shorter wavelengths, heating both electrons and ions. The electron heating is stronger and preferentially parallel/antiparallel to the background magnetic field $${{\\boldsymbol{B}}}_{{\\rm{o}}};$$ the ion energy gain is weaker and is preferentially in directions perpendicular to $${{\\boldsymbol{B}}}_{{\\rm{o}}}$$. The important new results here are that, over 0.01 < $${\\epsilon }_{{\\rm{o}}}$$ < 0.25, the maximum rate of electron heating scales approximately as $${\\epsilon }_{{\\rm{o}}}$$, and the maximum rate of ion heating scales approximately as $${\\epsilon }_{{\\rm{o}}}^{1.5}$$. A second ensemble of simulations at $${\\epsilon }_{{\\rm{o}}}$$ = 0.10 and $${\\beta }_{{\\rm{e}}}$$ = 0.25 shows that, over 25 < $${m}_{{\\rm{i}}}$$/$${m}_{{\\rm{e}}}\\;$$< 1836, the ratio of the maximum ion heating rate to the maximum electron heating rate scales approximately as $${m}_{{\\rm{e}}}$$/$${m}_{{\\rm{i}}}$$.« less

  7. Whistler turbulence heating of electrons and ions: Three-dimensional particle-in-cell simuations

    SciTech Connect

    Gary, S. Peter; Hughes, R. Scott; Wang, Joseph

    2016-01-14

    In this study, the decay of whistler turbulence in a collisionless, homogeneous, magnetized plasma is studied using three-dimensional particle-in-cell simulations. The simulations are initialized with a narrowband, relatively isotropic distribution of long wavelength whistler modes. A first ensemble of simulations at electron beta ${\\beta }_{{\\rm{e}}}$ = 0.25 and ion-to-electron mass ratio ${m}_{{\\rm{i}}}$/${m}_{{\\rm{e}}}$ = 400 is carried out on a domain cube of dimension $L{\\omega }_{\\mathrm{pi}}$/c = 5.12 where ${\\omega }_{\\mathrm{pi}}$ is the ion plasma frequency. The simulations begin with a range of dimensionless fluctuating field energy densities, ${\\epsilon }_{{\\rm{o}}}$, and follow the fluctuations as they cascade to broadband, anisotropic turbulence which dissipates at shorter wavelengths, heating both electrons and ions. The electron heating is stronger and preferentially parallel/antiparallel to the background magnetic field ${{\\boldsymbol{B}}}_{{\\rm{o}}};$ the ion energy gain is weaker and is preferentially in directions perpendicular to ${{\\boldsymbol{B}}}_{{\\rm{o}}}$. The important new results here are that, over 0.01 < ${\\epsilon }_{{\\rm{o}}}$ < 0.25, the maximum rate of electron heating scales approximately as ${\\epsilon }_{{\\rm{o}}}$, and the maximum rate of ion heating scales approximately as ${\\epsilon }_{{\\rm{o}}}^{1.5}$. A second ensemble of simulations at ${\\epsilon }_{{\\rm{o}}}$ = 0.10 and ${\\beta }_{{\\rm{e}}}$ = 0.25 shows that, over 25 < ${m}_{{\\rm{i}}}$/${m}_{{\\rm{e}}}\\;$< 1836, the ratio of the maximum ion heating rate to the maximum electron heating rate scales approximately as ${m}_{{\\rm{e}}}$/${m}_{{\\rm{i}}}$.

  8. Final Report for "Gyrotron Design and Evaluation using New Particle-in-Cell Capability"

    SciTech Connect

    David N Smithe

    2008-05-28

    ITER will depend on high power CW gyrotrons to deliver power to the plasma at ECR frequencies. However, gyrotrons can suffer from undesirable low frequency oscillations (LFO’s) which are known to interfere with the gun-region diagnostics and data collection, and are also expected to produce undesirable energy and velocity spread in the beam. The origins and processes leading to these oscillations are poorly understood, and existing gyrotron R&D tools, such as static gun solvers and interaction region models, are not designed to look at time-dependant oscillatory behavior. We have applied a time-domain particle-in-cell method to investigate the LFO phenomenon. Our company is at the forefront of smooth-curved-boundary treatment of the electromagnetic fields and particle emission surfaces, and such methods are necessary to simulate the adiabatically trapped and reflected electrons thought to be driving the oscillations. This approach provides the means for understanding, in microscopic detail, the underlying physical processes driving the low-frequency oscillations. In the Phase I project, an electron gun region from an existing gyrotron, known to observe LFO’s, was selected as a proof-of-principle geometry, and was modeled with the curved-geometry time-domain simulation tool, in order to establish the feasibility of simulating LFO physics with this tool on office-scale, and larger, parallel cluster computers. Generally, it was found to be feasible to model the simulation geometry, emission, and magnetic features of the electron gun. Ultimately, the tool will be used to investigate the origins and life cycle within the trapped particle population. This tool also provides the foundations and validation for potential application of the software to numerous other time-dependant beam and rf source problems in the commercial arena.

  9. A 1-D simulation analysis of the development and maintenance of the 2001 red tide of the ichthyotoxic dinoflagellate Karenia brevis on the West Florida shelf

    NASA Astrophysics Data System (ADS)

    Lenes, J. M.; Darrow, B. P.; Walsh, J. J.; Jolliff, J. K.; Chen, F. R.; Weisberg, R. H.; Zheng, L.

    2012-06-01

    A one-dimensional (1-D) ecological model, HABSIM, examined the initiation and maintenance of the 2001 red tide on the West Florida shelf (WFS). Phytoplankton competition among toxic dinoflagellates (Karenia brevis), nitrogen fixing cyanophytes (Trichodesmium erythraeum), large siliceous phytoplankton (diatoms), and small non-siliceous phytoplankton (microflagellates) explored the sequence of events required to support the observed red tide from August to December 2001. The ecological model contained 24 state variables within five submodels: circulation, atmospheric (iron deposition), bio-optics, pelagic (phytoplankton, nutrients, bacteria, zooplankton, and fish), and benthic (nutrient regeneration). The 2001 model results reaffirmed that diazotrophs are the basis for initiation of red tides of K. brevis on the WFS. A combination of selective grazing pressure, iron fertilization, low molar nitrogen to phosphorus ratios, and eventual silica limitation of fast-growing diatoms set the stage for dominance of nitrogen fixers. "New" nitrogen was made available for subsequent blooms of K. brevis through the release of ammonium and urea during nitrogen fixation, as well as during cell lysis, by the Trichodesmium population. Once K. brevis biomass reached ichthyotoxic levels, rapid decay of subsequent fish kills supplied additional organic nutrients for utilization by these opportunistic toxic algae. Both nutrient vectors represented organic non-siliceous sources of nitrogen and phosphorus, further exacerbating silica limitation of the diatom population. The model reproduced this spring transition from a simple estuarine-driven, diatom-based food chain to a complex summer-fall system of Trichodesmium and toxic dinoflagellates. While the model was able to replicate the initiation and maintenance of the 2001 red tide, bloom termination was not captured by this 1-D form on the WFS. Here, horizontal advection and perhaps cell lysis loss terms might play a significant role, to be

  10. Spacecraft charging analysis with the implicit particle-in-cell code iPic3D

    SciTech Connect

    Deca, J.; Lapenta, G.; Marchand, R.; Markidis, S.

    2013-10-15

    We present the first results on the analysis of spacecraft charging with the implicit particle-in-cell code iPic3D, designed for running on massively parallel supercomputers. The numerical algorithm is presented, highlighting the implementation of the electrostatic solver and the immersed boundary algorithm; the latter which creates the possibility to handle complex spacecraft geometries. As a first step in the verification process, a comparison is made between the floating potential obtained with iPic3D and with Orbital Motion Limited theory for a spherical particle in a uniform stationary plasma. Second, the numerical model is verified for a CubeSat benchmark by comparing simulation results with those of PTetra for space environment conditions with increasing levels of complexity. In particular, we consider spacecraft charging from plasma particle collection, photoelectron and secondary electron emission. The influence of a background magnetic field on the floating potential profile near the spacecraft is also considered. Although the numerical approaches in iPic3D and PTetra are rather different, good agreement is found between the two models, raising the level of confidence in both codes to predict and evaluate the complex plasma environment around spacecraft.

  11. Particle-in-Cell Modeling of Magnetized Argon Plasma Flow Through Small Mechanical Apertures

    SciTech Connect

    Adam B. Sefkow and Samuel A. Cohen

    2009-04-09

    Motivated by observations of supersonic argon-ion flow generated by linear helicon-heated plasma devices, a three-dimensional particle-in-cell (PIC) code is used to study whether stationary electrostatic layers form near mechanical apertures intersecting the flow of magnetized plasma. By self-consistently evaluating the temporal evolution of the plasma in the vicinity of the aperture, the PIC simulations characterize the roles of the imposed aperture and applied magnetic field on ion acceleration. The PIC model includes ionization of a background neutral-argon population by thermal and superthermal electrons, the latter found upstream of the aperture. Near the aperture, a transition from a collisional to a collisionless regime occurs. Perturbations of density and potential, with mm wavelengths and consistent with ion acoustic waves, propagate axially. An ion acceleration region of length ~ 200-300 λD,e forms at the location of the aperture and is found to be an electrostatic double layer, with axially-separated regions of net positive and negative charge. Reducing the aperture diameter or increasing its length increases the double layer strength.

  12. Recent advances in the modeling of plasmas with the Particle-In-Cell methods

    NASA Astrophysics Data System (ADS)

    Vay, Jean-Luc; Lehe, Remi; Vincenti, Henri; Godfrey, Brendan; Lee, Patrick; Haber, Irv

    2015-11-01

    The Particle-In-Cell (PIC) approach is the method of choice for self-consistent simulations of plasmas from first principles. The fundamentals of the PIC method were established decades ago but improvements or variations are continuously being proposed. We report on several recent advances in PIC related algorithms, including: (a) detailed analysis of the numerical Cherenkov instability and its remediation, (b) analytic pseudo-spectral electromagnetic solvers in Cartesian and cylindrical (with azimuthal modes decomposition) geometries, (c) arbitrary-order finite-difference and generalized pseudo-spectral Maxwell solvers, (d) novel analysis of Maxwell's solvers' stencil variation and truncation, in application to domain decomposition strategies and implementation of Perfectly Matched Layers in high-order and pseudo-spectral solvers. Work supported by US-DOE Contracts DE-AC02-05CH11231 and the US-DOE SciDAC program ComPASS. Used resources of NERSC, supported by US-DOE Contract DE-AC02-05CH11231.

  13. Particle-in-cell study of the ion-to-electron sheath transition

    SciTech Connect

    Scheiner, Brett; Baalrud, Scott D.; Hopkins, Matthew M.; Yee, Benjamin T.; Barnat, Edward V.

    2016-08-09

    The form of a sheath near a small electrode, with bias changing from below to above the plasma potential, is studied using 2D particle-in-cell simulations. When the electrode is biased within Te/2e below the plasma potential, the electron velocity distribution functions (EVDFs) exhibit a loss-cone type truncation due to fast electrons overcoming the small potential difference between the electrode and plasma. No sheath is present in this regime, and the plasma remains quasineutral up to the electrode. The EVDF truncation leads to a presheath-like density and flow velocity gradients. Once the bias exceeds the plasma potential, an electron sheath is present. In this case, the truncation driven behavior persists, but is accompanied by a shift in the maximum value of the EVDF that is not present in the negative bias cases. In conclusion, the flow moment has significant contributions from both the flow shift of the EVDF maximum, and the loss-cone truncation.

  14. An incompressible two-dimensional multiphase particle-in-cell model for dense particle flows

    SciTech Connect

    Snider, D.M.; O`Rourke, P.J.; Andrews, M.J.

    1997-06-01

    A two-dimensional, incompressible, multiphase particle-in-cell (MP-PIC) method is presented for dense particle flows. The numerical technique solves the governing equations of the fluid phase using a continuum model and those of the particle phase using a Lagrangian model. Difficulties associated with calculating interparticle interactions for dense particle flows with volume fractions above 5% have been eliminated by mapping particle properties to a Eulerian grid and then mapping back computed stress tensors to particle positions. This approach utilizes the best of Eulerian/Eulerian continuum models and Eulerian/Lagrangian discrete models. The solution scheme allows for distributions of types, sizes, and density of particles, with no numerical diffusion from the Lagrangian particle calculations. The computational method is implicit with respect to pressure, velocity, and volume fraction in the continuum solution thus avoiding courant limits on computational time advancement. MP-PIC simulations are compared with one-dimensional problems that have analytical solutions and with two-dimensional problems for which there are experimental data.

  15. Novel methods in the Particle-In-Cell accelerator Code-Framework Warp

    SciTech Connect

    Vay, J-L; Grote, D. P.; Cohen, R. H.; Friedman, A.

    2012-12-26

    The Particle-In-Cell (PIC) Code-Framework Warp is being developed by the Heavy Ion Fusion Science Virtual National Laboratory (HIFS-VNL) to guide the development of accelerators that can deliver beams suitable for high-energy density experiments and implosion of inertial fusion capsules. It is also applied in various areas outside the Heavy Ion Fusion program to the study and design of existing and next-generation high-energy accelerators, including the study of electron cloud effects and laser wakefield acceleration for example. This study presents an overview of Warp's capabilities, summarizing recent original numerical methods that were developed by the HIFS-VNL (including PIC with adaptive mesh refinement, a large-timestep 'drift-Lorentz' mover for arbitrarily magnetized species, a relativistic Lorentz invariant leapfrog particle pusher, simulations in Lorentz-boosted frames, an electromagnetic solver with tunable numerical dispersion and efficient stride-based digital filtering), with special emphasis on the description of the mesh refinement capability. In addition, selected examples of the applications of the methods to the abovementioned fields are given.

  16. Particle-in-cell study of the ion-to-electron sheath transition

    DOE PAGES

    Scheiner, Brett; Baalrud, Scott D.; Hopkins, Matthew M.; ...

    2016-08-09

    The form of a sheath near a small electrode, with bias changing from below to above the plasma potential, is studied using 2D particle-in-cell simulations. When the electrode is biased within Te/2e below the plasma potential, the electron velocity distribution functions (EVDFs) exhibit a loss-cone type truncation due to fast electrons overcoming the small potential difference between the electrode and plasma. No sheath is present in this regime, and the plasma remains quasineutral up to the electrode. The EVDF truncation leads to a presheath-like density and flow velocity gradients. Once the bias exceeds the plasma potential, an electron sheath ismore » present. In this case, the truncation driven behavior persists, but is accompanied by a shift in the maximum value of the EVDF that is not present in the negative bias cases. In conclusion, the flow moment has significant contributions from both the flow shift of the EVDF maximum, and the loss-cone truncation.« less

  17. Performance of particle in cell methods on highly concurrent computational architectures

    NASA Astrophysics Data System (ADS)

    Adams, M. F.; Ethier, S.; Wichmann, N.

    2007-07-01

    Particle in cell (PIC) methods are effective in computing Vlasov-Poisson system of equations used in simulations of magnetic fusion plasmas. PIC methods use grid based computations, for solving Poisson's equation or more generally Maxwell's equations, as well as Monte-Carlo type methods to sample the Vlasov equation. The presence of two types of discretizations, deterministic field solves and Monte-Carlo methods for the Vlasov equation, pose challenges in understanding and optimizing performance on today large scale computers which require high levels of concurrency. These challenges arises from the need to optimize two very different types of processes and the interactions between them. Modern cache based high-end computers have very deep memory hierarchies and high degrees of concurrency which must be utilized effectively to achieve good performance. The effective use of these machines requires maximizing concurrency by eliminating serial or redundant work and minimizing global communication. A related issue is minimizing the memory traffic between levels of the memory hierarchy because performance is often limited by the bandwidths and latencies of the memory system. This paper discusses some of the performance issues, particularly in regard to parallelism, of PIC methods. The gyrokinetic toroidal code (GTC) is used for these studies and a new radial grid decomposition is presented and evaluated. Scaling of the code is demonstrated on ITER sized plasmas with up to 16K Cray XT3/4 cores.

  18. External circuit integration with electromagnetic particle in cell modeling of plasma focus devices

    SciTech Connect

    Seng, Y. S.; Lee, P.; Rawat, R. S.

    2015-03-15

    The pinch performance of a plasma focus (PF) device is sensitive to the physical conditions of the breakdown phase. It is therefore essential to model and study the initial phase in order to optimize device performance. An external circuit is self consistently coupled to the electromagnetic particle in cell code to model the breakdown and initial lift phase of the United Nations University/International Centre for Theoretical Physics (UNU-ICTP) plasma focus device. Gas breakdown during the breakdown phase is simulated successfully, following a drop in the applied voltage across the device and a concurrent substantial rise in the circuit current. As a result, the plasma becomes magnetized, with the growing value of the magnetic field over time leading to the gradual lift off of the well formed current sheath into the axial acceleration phase. This lifting off, with simultaneous outward sheath motion along the anode and vertical cathode, and the strong magnetic fields in the current sheath region, was demonstrated in this work, and hence validates our method of coupling the external circuit to PF devices. Our method produces voltage waveforms that are qualitatively similar to the observed experimental voltage profiles of the UNU-ICTP device. Values of the mean electron energy before and after voltage breakdown turned out to be different, with the values after breakdown being much lower. In both cases, the electron energy density function turned out to be non-Maxwellian.

  19. Particle-In-Cell Analysis of an Electric Antenna for the BepiColombo/MMO spacecraft

    NASA Astrophysics Data System (ADS)

    Miyake, Yohei; Usui, Hideyuki; Kojima, Hirotsugu

    The BepiColombo/MMO spacecraft is planned to provide a first electric field measurement in Mercury's magnetosphere by mounting two types of the electric antennas: WPT and MEFISTO. The sophisticated calibration of such measurements should be performed based on precise knowledge of the antenna characteristics in space plasma. However, it is difficult to know prac-tical antenna characteristics considering the plasma kinetics and spacecraft-plasma interactions by means of theoretical approaches. Furthermore, some modern antenna designing techniques such as a "hockey puck" principle is applied to MEFISTO, which introduces much complexity in its overall configuration. Thus a strong demand arises regarding the establishment of a nu-merical method that can solve the complex configuration and plasma dynamics for evaluating the electric properties of the modern instrument. For the self-consistent antenna analysis, we have developed a particle simulation code named EMSES based on the particle-in-cell technique including a treatment antenna conductive sur-faces. In this paper, we mainly focus on electrostatic (ES) features and photoelectron distri-bution in the vicinity of MEFISTO. Our simulation model includes (1) a photoelectron guard electrode, (2) a bias current provided from the spacecraft body to the sensing element, (3) a floating potential treatment for the spacecraft body, and (4) photoelectron emission from sunlit surfaces of the conductive bodies. Of these, the photoelectron guard electrode is a key technol-ogy for producing an optimal condition of plasma environment around MEFISTO. Specifically, we introduced a pre-amplifier housing called puck located between the conductive boom and the sensor wire. The photoelectron guard is then simulated by forcibly fixing the potential difference between the puck surface and the spacecraft body. For the modeling, we use the Capacity Matrix technique in order to assure the conservation condition of total charge owned by the

  20. On the potential for CO2 mineral storage in continental flood basalts - PHREEQC batch- and 1D diffusion-reaction simulations.

    PubMed

    Van Pham, Thi Hai; Aagaard, Per; Hellevang, Helge

    2012-06-14

    Continental flood basalts (CFB) are considered as potential CO2 storage sites because of their high reactivity and abundant divalent metal ions that can potentially trap carbon for geological timescales. Moreover, laterally extensive CFB are found in many place in the world within reasonable distances from major CO2 point emission sources.Based on the mineral and glass composition of the Columbia River Basalt (CRB) we estimated the potential of CFB to store CO2 in secondary carbonates. We simulated the system using kinetic dependent dissolution of primary basalt-minerals (pyroxene, feldspar and glass) and the local equilibrium assumption for secondary phases (weathering products). The simulations were divided into closed-system batch simulations at a constant CO2 pressure of 100 bar with sensitivity studies of temperature and reactive surface area, an evaluation of the reactivity of H2O in scCO2, and finally 1D reactive diffusion simulations giving reactivity at CO2 pressures varying from 0 to 100 bar.Although the uncertainty in reactive surface area and corresponding reaction rates are large, we have estimated the potential for CO2 mineral storage and identified factors that control the maximum extent of carbonation. The simulations showed that formation of carbonates from basalt at 40 C may be limited to the formation of siderite and possibly FeMg carbonates. Calcium was largely consumed by zeolite and oxide instead of forming carbonates. At higher temperatures (60 - 100 C), magnesite is suggested to form together with siderite and ankerite. The maximum potential of CO2 stored as solid carbonates, if CO2 is supplied to the reactions unlimited, is shown to depend on the availability of pore space as the hydration and carbonation reactions increase the solid volume and clog the pore space. For systems such as in the scCO2 phase with limited amount of water, the total carbonation potential is limited by the amount of water present for hydration of basalt.

  1. On the potential for CO2 mineral storage in continental flood basalts – PHREEQC batch- and 1D diffusion–reaction simulations

    PubMed Central

    2012-01-01

    Continental flood basalts (CFB) are considered as potential CO2 storage sites because of their high reactivity and abundant divalent metal ions that can potentially trap carbon for geological timescales. Moreover, laterally extensive CFB are found in many place in the world within reasonable distances from major CO2 point emission sources. Based on the mineral and glass composition of the Columbia River Basalt (CRB) we estimated the potential of CFB to store CO2 in secondary carbonates. We simulated the system using kinetic dependent dissolution of primary basalt-minerals (pyroxene, feldspar and glass) and the local equilibrium assumption for secondary phases (weathering products). The simulations were divided into closed-system batch simulations at a constant CO2 pressure of 100 bar with sensitivity studies of temperature and reactive surface area, an evaluation of the reactivity of H2O in scCO2, and finally 1D reactive diffusion simulations giving reactivity at CO2 pressures varying from 0 to 100 bar. Although the uncertainty in reactive surface area and corresponding reaction rates are large, we have estimated the potential for CO2 mineral storage and identified factors that control the maximum extent of carbonation. The simulations showed that formation of carbonates from basalt at 40 C may be limited to the formation of siderite and possibly FeMg carbonates. Calcium was largely consumed by zeolite and oxide instead of forming carbonates. At higher temperatures (60 – 100 C), magnesite is suggested to form together with siderite and ankerite. The maximum potential of CO2 stored as solid carbonates, if CO2 is supplied to the reactions unlimited, is shown to depend on the availability of pore space as the hydration and carbonation reactions increase the solid volume and clog the pore space. For systems such as in the scCO2 phase with limited amount of water, the total carbonation potential is limited by the amount of water present for hydration of basalt

  2. The 5-HT1D/1B receptor agonist sumatriptan enhances fear of simulated speaking and reduces plasma levels of prolactin.

    PubMed

    de Rezende, Marcos Gonçalves; Garcia-Leal, Cybele; Graeff, Frederico Guilherme; Del-Ben, Cristina Marta

    2013-12-01

    This study measured the effects of the preferential 5-HT1D/1B receptor agonist sumatriptan in healthy volunteers who performed the Simulated Public Speaking Test (SPST), which recruits the neural network involved in panic disorder and social anxiety disorder. In a double-blind, randomised experiment, 36 males received placebo (12), 50 mg (12) or 100 mg (12) of sumatriptan 2 h before the SPST. Subjective, physiological and hormonal measures were taken before, during and after the test. The dose of 100 mg of sumatriptan increased speech-induced fear more than either a 50mg dose of the drug or placebo. The largest dose of sumatriptan also enhanced vigilance more than placebo, without any change in blood pressure, heart rate or electrical skin conductance. Sumatriptan decreased plasma levels of prolactin. A significant but moderate increase in plasma cortisol after SPST occurred, independent of treatment. Because sumatriptan decreases 5-HT release into the extracellular space, the potentiation of SPST-induced fear caused by the drug supports the hypothesis that 5-HT attenuates this emotional state. As acute administration of antidepressants has also been shown to enhance speaking fear and increase plasma prolactin, in contrast to sumatriptan, the 5-HT regulation of stress-hormone release is likely to be different from that of emotion.

  3. An energy- and charge-conserving, implicit, electrostatic particle-in-cell algorithm

    NASA Astrophysics Data System (ADS)

    Chen, G.; Chacón, L.; Barnes, D. C.

    2011-08-01

    This paper discusses a novel fully implicit formulation for a one-dimensional electrostatic particle-in-cell (PIC) plasma simulation approach. Unlike earlier implicit electrostatic PIC approaches (which are based on a linearized Vlasov-Poisson formulation), ours is based on a nonlinearly converged Vlasov-Ampére (VA) model. By iterating particles and fields to a tight nonlinear convergence tolerance, the approach features superior stability and accuracy properties, avoiding most of the accuracy pitfalls in earlier implicit PIC implementations. In particular, the formulation is stable against temporal (Courant-Friedrichs-Lewy) and spatial (aliasing) instabilities. It is charge- and energy-conserving to numerical round-off for arbitrary implicit time steps (unlike the earlier "energy-conserving" explicit PIC formulation, which only conserves energy in the limit of arbitrarily small time steps). While momentum is not exactly conserved, errors are kept small by an adaptive particle sub-stepping orbit integrator, which is instrumental to prevent particle tunneling (a deleterious effect for long-term accuracy). The VA model is orbit-averaged along particle orbits to enforce an energy conservation theorem with particle sub-stepping. As a result, very large time steps, constrained only by the dynamical time scale of interest, are possible without accuracy loss. Algorithmically, the approach features a Jacobian-free Newton-Krylov solver. A main development in this study is the nonlinear elimination of the new-time particle variables (positions and velocities). Such nonlinear elimination, which we term particle enslavement, results in a nonlinear formulation with memory requirements comparable to those of a fluid computation, and affords us substantial freedom in regards to the particle orbit integrator. Numerical examples are presented that demonstrate the advertised properties of the scheme. In particular, long-time ion acoustic wave simulations show that numerical

  4. Toroidal Electromagnetic Particle-in-Cell Code with Gyro-kinetic Electron and Fully-kinetic ion

    NASA Astrophysics Data System (ADS)

    Lin, Jingbo; Zhang, Wenlu; Liu, Pengfei; Li, Ding

    2016-10-01

    A kinetic simulation model has been developed using gyro-kinetic electron and fully-kinetic ion by removing fast gyro motion of electrons using the Lie-transform perturbation theory. A particle-in-cell kinetic code is developed based on this model in general magnetic flux coordinate systems, which is particularly suitable for simulations of toroidally confined plasma. Single particle motion and field solver are successfully verified respectively. Integrated electrostatic benchmark, for example the lower-hybrid wave (LHW) and ion Bernstein wave (IBW), shows a good agreement with theoretical results. Preliminary electromagnetic benchmark of fast wave at lower hybrid frequency range is also presented. This code can be a first-principal tool to investigate high frequency nonlinear phenomenon, such as parametric decay instability, during lower-hybrid current drive (LHCD) and ion cyclotron radio frequency heating (ICRF) with complex geometry effect included. Supported by National Special Research Program of China For ITER and National Natural Science Foundation of China.

  5. Self-consistent particle-in-cell modelling of short pulse absorption and transport for high energy density physics experiments

    NASA Astrophysics Data System (ADS)

    Ramsay, M. G.; Arber, T. D.; Sircombe, N. J.

    2016-03-01

    In order for detailed, solid density particle-in-cell (PIC) simulations to run within a reasonable time frame, novel approaches to modelling high density material must be employed. For the purposes of modelling high intensity, short pulse laser-plasma interactions, however, these approaches must be consistent with retaining a full PIC model in the low-density laser interaction region. By replacing the standard Maxwell field solver with an electric field update based on a simplified Ohm's law in regions of high electron density, it is possible to access densities at and above solid without being subject to the standard grid and time step constraints. Such a model has recently been implemented in the PIC code EPOCH. We present the initial results of a detailed two-dimensional simulation performed to compare the adapted version of the code with recent experimental results from the Orion laser facility.

  6. A variational multi-symplectic particle-in-cell algorithm with smoothing functions for the Vlasov-Maxwell system

    SciTech Connect

    Xiao, Jianyuan; Liu, Jian; Qin, Hong; Yu, Zhi

    2013-10-15

    Smoothing functions are commonly used to reduce numerical noise arising from coarse sampling of particles in particle-in-cell (PIC) plasma simulations. When applying smoothing functions to symplectic algorithms, the conservation of symplectic structure should be guaranteed to preserve good conservation properties. In this paper, we show how to construct a variational multi-symplectic PIC algorithm with smoothing functions for the Vlasov-Maxwell system. The conservation of the multi-symplectic structure and the reduction of numerical noise make this algorithm specifically suitable for simulating long-term dynamics of plasmas, such as those in the steady-state operation or long-pulse discharge of a super-conducting tokamak. The algorithm has been implemented in a 6D large scale PIC code. Numerical examples are given to demonstrate the good conservation properties of the multi-symplectic algorithm and the reduction of the noise due to the application of smoothing function.

  7. BOA, Beam Optics Analyzer A Particle-In-Cell Code

    SciTech Connect

    Thuc Bui

    2007-12-06

    The program was tasked with implementing time dependent analysis of charges particles into an existing finite element code with adaptive meshing, called Beam Optics Analyzer (BOA). BOA was initially funded by a DOE Phase II program to use the finite element method with adaptive meshing to track particles in unstructured meshes. It uses modern programming techniques, state-of-the-art data structures, so that new methods, features and capabilities are easily added and maintained. This Phase II program was funded to implement plasma simulations in BOA and extend its capabilities to model thermal electrons, secondary emissions, self magnetic field and implement a more comprehensive post-processing and feature-rich GUI. The program was successful in implementing thermal electrons, secondary emissions, and self magnetic field calculations. The BOA GUI was also upgraded significantly, and CCR is receiving interest from the microwave tube and semiconductor equipment industry for the code. Implementation of PIC analysis was partially successful. Computational resource requirements for modeling more than 2000 particles begin to exceed the capability of most readily available computers. Modern plasma analysis typically requires modeling of approximately 2 million particles or more. The problem is that tracking many particles in an unstructured mesh that is adapting becomes inefficient. In particular memory requirements become excessive. This probably makes particle tracking in unstructured meshes currently unfeasible with commonly available computer resources. Consequently, Calabazas Creek Research, Inc. is exploring hybrid codes where the electromagnetic fields are solved on the unstructured, adaptive mesh while particles are tracked on a fixed mesh. Efficient interpolation routines should be able to transfer information between nodes of the two meshes. If successfully developed, this could provide high accuracy and reasonable computational efficiency.

  8. Comparison between 1D and 1 1/2D Eulerian Vlasov codes for the numerical simulation of stimulated Raman scattering

    NASA Astrophysics Data System (ADS)

    Ghizzo, A.; Bertrand, P.; Lebas, J.; Shoucri, M.; Johnston, T.; Fijalkow, E.; Feix, M. R.

    1992-10-01

    The present 1 1/2D relativistic Euler-Vlasov code has been used to check the validity of a hydrodynamic description used in a 1D version of the Vlasov code. By these means, detailed numerical results can be compared; good agreement furnishes full support for the 1D electromagnetic Vlasov code, which runs faster than the 1 1/2D code. The results obtained assume a nonrelativistic v(y) velocity.

  9. Particle-in-cell based parameter study of 12-cavity, 12-cathode rising-sun relativistic magnetrons for improved performance

    SciTech Connect

    Majzoobi, A.; Joshi, R. P. Neuber, A. A.; Dickens, J. C.

    2015-10-15

    Particle-in-cell simulations are performed to analyze the efficiency, output power and leakage currents in a 12-Cavity, 12-Cathode rising-sun magnetron with diffraction output (MDO). The central goal is to conduct a parameter study of a rising-sun magnetron that comprehensively incorporates performance enhancing features such as transparent cathodes, axial extraction, the use of endcaps, and cathode extensions. Our optimum results demonstrate peak output power of about 2.1 GW, with efficiencies of ∼70% and low leakage currents at a magnetic field of 0.45 Tesla, a 400 kV bias with a single endcap, for a range of cathode extensions between 3 and 6 centimeters.

  10. Design and development of a multi-architecture, fully implicit, charge and energy conserving particle-in-cell framework

    NASA Astrophysics Data System (ADS)

    Payne, Joshua; Knoll, Dana; McPherson, Allen; Taitano, William; Chacon, Luis; Chen, Guangye; Pakin, Scott

    2013-10-01

    As computer architectures become increasingly heterogeneous the need for algorithms and applications that can utilize these new architectures grows more pressing. CoCoPIC is a fully implicit charge and energy conserving particle-in-cell framework developed as part of the Computational Co-Design for Multi-Scale Applications in the Natural Sciences (CoCoMANS) project at Los Alamos National Laboratory. CoCoMANS is a multi-disciplinary computational co-design effort with the goal of developing new algorithms for emerging architectures using multi-scale applications. This poster will present the co-design process evolved within CoCoMANS, and details regarding the design and development of multi-architecture framework for a plasma application. This framework utilizes multiple abstraction layers in order to maximize code reuse between architectures, while providing low level abstractions to incorporate architecture specific operation optimizations such as vectorizations or hardware fused multiply-add. CoCoPIC's target problems include 1D3V slow shocks, and 2D3V magnetic island coalescence. Results of the multi-core development and optimization process will be presented.

  11. Adaptive Vlasov Simulations of Intense Beams

    SciTech Connect

    Sonnendruecker, Eric; Gutnic, Michael; Haefele, Matthieu; Lemaire, Jean-Louis

    2005-06-08

    Most simulations of intense particle beams are performed nowadays using Particle In Cell (PIC) techniques. Direct grid based Vlasov methods have also been used but mostly for 1D simulations as they become very costly in higher dimensions when using uniform phase space grids. We have recently introduced adaptive mesh refinement techniques that allow us to automatically concentrate the grid points at places where the distribution function is varying most. In this paper we shall introduce this technique and show how it can be used to improve the efficiency of grid based Vlasov solvers.

  12. Integrating models to simulate emergent behaviour: effects of organic matter on soil hydraulics in the ICZ-1D soil-vegetation model

    NASA Astrophysics Data System (ADS)

    Valstar, Johan; Rowe, Ed; Konstantina, Moirogiorgou; Giannakis, Giorgos; Nikolaidis, Nikolaos

    2014-05-01

    explore the complex interactions involved in soil development and change. We were unable to identify appropriately-detailed existing models for plant productivity and for the dynamics of soil aggregation and porosity, and so developed the PROSUM and CAST models, respectively, to simulate these subsystems. Moreover, we applied the BRNS generator to obtain a chemical equilibrium model. These were combined with HYDRUS-1D (water and solute transport), a weathering model (derived from the SAFE model) and a simple bioturbation model. The model includes several feedbacks, such as the effect of soil organic matter on water retention and hydraulic conductivity. We encountered several important challenges when building the integrated model. First, a mechanism was developed that initiates the execution of a single time step for an individual sub-model and accounts for the relevant mass transfers between sub-models. This allows for different and sometimes variable time step duration in the submodels. Secondly, we removed duplicated processes and identified and included relevant solute production terms that had been neglected. The model is being tested against datasets obtained from several Soil Critical Zone Observatories in Europe. This contribution focuses on the design strategy for the model.

  13. Leap frog integrator modifications in highly collisional particle-in-cell codes

    NASA Astrophysics Data System (ADS)

    Hanzlikova, N.; Turner, M. M.

    2014-07-01

    Leap frog integration method is a standard, simple, fast, and accurate way to implement velocity and position integration in particle-in-cell codes. Due to the direct solution of kinetics of particles in phase space central to the particle-in-cell procedure, important information can be obtained on particle velocity distributions, and consequently on transport and heating processes. This approach is commonly associated with physical situations where collisional effects are weak, but can also be profitably applied in some highly collisional cases, such as occur in semiconductor devices and gaseous discharges at atmospheric pressure. In this paper, we show that the implementation of the leap frog integration method in these circumstances can violate some of the assumptions central to the accuracy of this scheme. Indeed, without adaptation, the method gives incorrect results. We show here how the method must be modified to deal correctly with highly collisional cases.

  14. First experience with particle-in-cell plasma physics code on ARM-based HPC systems

    NASA Astrophysics Data System (ADS)

    Sáez, Xavier; Soba, Alejandro; Sánchez, Edilberto; Mantsinen, Mervi; Mateo, Sergi; Cela, José M.; Castejón, Francisco

    2015-09-01

    In this work, we will explore the feasibility of porting a Particle-in-cell code (EUTERPE) to an ARM multi-core platform from the Mont-Blanc project. The used prototype is based on a system-on-chip Samsung Exynos 5 with an integrated GPU. It is the first prototype that could be used for High-Performance Computing (HPC), since it supports double precision and parallel programming languages.

  15. Geometric Integration Of The Vlasov-Maxwell System With A Variational Particle-in-cell Scheme

    SciTech Connect

    J. Squire, H. Qin and W.M. Tang

    2012-03-27

    A fully variational, unstructured, electromagnetic particle-in-cell integrator is developed for integration of the Vlasov-Maxwell equations. Using the formalism of Discrete Exterior Calculus [1], the field solver, interpolation scheme and particle advance algorithm are derived through minimization of a single discrete field theory action. As a consequence of ensuring that the action is invariant under discrete electromagnetic gauge transformations, the integrator exactly conserves Gauss's law.

  16. Geometric integration of the Vlasov-Maxwell system with a variational particle-in-cell scheme

    SciTech Connect

    Squire, J.; Tang, W. M.; Qin, H.

    2012-08-15

    A fully variational, unstructured, electromagnetic particle-in-cell integrator is developed for integration of the Vlasov-Maxwell equations. Using the formalism of discrete exterior calculus [Desbrun et al., e-print arXiv:math/0508341 (2005)], the field solver, interpolation scheme, and particle advance algorithm are derived through minimization of a single discrete field theory action. As a consequence of ensuring that the action is invariant under discrete electromagnetic gauge transformations, the integrator exactly conserves Gauss's law.

  17. Modeling of relativistic plasmas with the Particle-In-Cell method

    NASA Astrophysics Data System (ADS)

    Vay, Jean-Luc; Godfrey, Brendan B.

    2014-10-01

    Standard methods employed in relativistic electromagnetic Particle-In-Cell codes are reviewed, as well as novel techniques that were introduced recently. Advances in the analysis and mitigation of the numerical Cherenkov instability are also presented with comparison between analytical theory and numerical experiments. The algorithmic and numerical analytic advances are expanding the range of applicability of the method in the ultra-relativistic regime in particular, where the numerical Cherenkov instability is the strongest without corrective measures.

  18. FLIP: A method for adaptively zoned, particle-in-cell calculations of fluid in two dimensions

    SciTech Connect

    Brackbill, J.U.; Ruppel, H.M.

    1986-08-01

    A method is presented for calculating fluid flow in two dimensions using a full particle-in-cell representation on an adaptively zoned grid. The method has many interesting properties, among them an almost total absence of numerical dissipation and the ability to represent large variations in the data. The method is described using a standard formalism and its properties are illustrated by supersonic flow over a step and the interaction of a shock with a thin foil.

  19. Calibration of a 1D/1D urban flood model using 1D/2D model results in the absence of field data.

    PubMed

    Leandro, J; Djordjević, S; Chen, A S; Savić, D A; Stanić, M

    2011-01-01

    Recently increased flood events have been prompting researchers to improve existing coupled flood-models such as one-dimensional (1D)/1D and 1D/two-dimensional (2D) models. While 1D/1D models simulate sewer and surface networks using a one-dimensional approach, 1D/2D models represent the surface network by a two-dimensional surface grid. However their application raises two issues to urban flood modellers: (1) stormwater systems planning/emergency or risk analysis demands for fast models, and the 1D/2D computational time is prohibitive, (2) and the recognized lack of field data (e.g. Hunter et al. (2008)) causes difficulties for the calibration/validation of 1D/1D models. In this paper we propose to overcome these issues by calibrating a 1D/1D model with the results of a 1D/2D model. The flood-inundation results show that: (1) 1D/2D results can be used to calibrate faster 1D/1D models, (2) the 1D/1D model is able to map the 1D/2D flood maximum extent well, and the flooding limits satisfactorily in each time-step, (3) the 1D/1D model major differences are the instantaneous flow propagation and overestimation of the flood-depths within surface-ponds, (4) the agreement in the volume surcharged by both models is a necessary condition for the 1D surface-network validation and (5) the agreement of the manholes discharge shapes measures the fitness of the calibrated 1D surface-network.

  20. Particle-In-Cell Modeling of Hall-Driven Magnetic Penetration and Species Separation in Two-Species Plasmas

    NASA Astrophysics Data System (ADS)

    Richardson, Andrew; Swanekamp, Stephen; Ottinger, Paul; Angus, Justin; Rittersdorf, Ian; Schumer, Joseph

    2014-10-01

    Understanding the interaction of a strong magnetic field with a plasma is a key problem in plasma physics. In this poster we report on a new systematic study using two-dimensional particle-in-cell simulations designed to explore the interplay between magnetic pushing and Hall-driven magnetic field penetration. In plasma where the ions are infinitely massive and ∇n × B > 0 , the magnetic field penetrates into the plasma at a specific fraction of the Hall speed, vb. When the ions have finite mass, the penetrating magnetic field gives an impulse to the ions, accelerating them to speed vi. In a two-species plasma, simulations show simultaneous pushing of the light-ion species and magnetic field penetration through the heavy-ion species when vheavy simulations. This work was supported by the NRL Basic and Applied Research Program.

  1. Particle-in-cell modeling of spacecraft-plasma interaction effects on double-probe electric field measurements

    NASA Astrophysics Data System (ADS)

    Miyake, Y.; Usui, H.

    2016-12-01

    The double-probe technique, commonly used for electric field measurements in magnetospheric plasmas, is susceptible to environmental perturbations caused by spacecraft-plasma interactions. To better model the interactions, we have extended the existing particle-in-cell simulation technique so that it accepts very small spacecraft structures, such as thin wire booms, by incorporating an accurate potential field solution calculated based on the boundary element method. This immersed boundary element approach is effective for quantifying the impact of geometrically small but electrically large spacecraft elements on the formation of sheaths or wakes. The developed model is applied to the wake environment near a Cluster satellite for three distinctive plasma conditions: the solar wind, the tail lobe, and just outside the plasmapause. The simulations predict the magnitudes and waveforms of wake-derived spurious electric fields, and these are in good agreement with in situ observations. The results also reveal the detailed structure of potential around the double probes. It shows that any probes hardly experience a negative wake potential in their orbit, and instead, they experience an unbalanced drop rate of a large potential hill that is created by the spacecraft and boom bodies. As a by-product of the simulations, we also found a photoelectron short-circuiting effect that is analogous to the well-known short-circuiting effect due to the booms of a double-probe instrument. The effect is sustained by asymmetric photoelectron distributions that cancel out the external electric field.

  2. Near-infrared spectro-interferometry of Mira variables and comparisons to 1D dynamic model atmospheres and 3D convection simulations

    NASA Astrophysics Data System (ADS)

    Wittkowski, M.; Chiavassa, A.; Freytag, B.; Scholz, M.; Höfner, S.; Karovicova, I.; Whitelock, P. A.

    2016-03-01

    Aims: We aim at comparing spectro-interferometric observations of Mira variable asymptotic giant branch (AGB) stars with the latest 1D dynamic model atmospheres based on self-excited pulsation models (CODEX models) and with 3D dynamic model atmospheres including pulsation and convection (CO5BOLD models) to better understand the processes that extend the molecular atmosphere to radii where dust can form. Methods: We obtained a total of 20 near-infrared K-band spectro-interferometric snapshot observations of the Mira variables o Cet, R Leo, R Aqr, X Hya, W Vel, and R Cnc with a spectral resolution of about 1500. We compared observed flux and visibility spectra with predictions by CODEX 1D dynamic model atmospheres and with azimuthally averaged intensities based on CO5BOLD 3D dynamic model atmospheres. Results: Our visibility data confirm the presence of spatially extended molecular atmospheres located above the continuum radii with large-scale inhomogeneities or clumps that contribute a few percent of the total flux. The detailed structure of the inhomogeneities or clumps show a variability on time scales of 3 months and above. Both modeling attempts provided satisfactory fits to our data. In particular, they are both consistent with the observed decrease in the visibility function at molecular bands of water vapor and CO, indicating a spatially extended molecular atmosphere. Observational variability phases are mostly consistent with those of the best-fit CODEX models, except for near-maximum phases, where data are better described by near-minimum models. Rosseland angular diameters derived from the model fits are broadly consistent between those based on the 1D and the 3D models and with earlier observations. We derived fundamental parameters including absolute radii, effective temperatures, and luminosities for our sources. Conclusions: Our results provide a first observational support for theoretical results that shocks induced by convection and pulsation in the

  3. Numerical Approach of Interactions of Proton Beams and Dense Plasmas with Quantum-Hydrodynamic/Particle-in-Cell Model

    NASA Astrophysics Data System (ADS)

    Zhang, Ya; Li, Lian; Jiang, Wei; Yi, Lin

    2016-07-01

    A one dimensional quantum-hydrodynamic/particle-in-cell (QHD/PIC) model is used to study the interaction process of an intense proton beam (injection density of 1017 cm-3) with a dense plasma (initial density of ~ 1021 cm-3), with the PIC method for simulating the beam particle dynamics and the QHD model for considering the quantum effects including the quantum statistical and quantum diffraction effects. By means of the QHD theory, the wake electron density and wakefields are calculated, while the proton beam density is calculated by the PIC method and compared to hydrodynamic results to justify that the PIC method is a more suitable way to simulate the beam particle dynamics. The calculation results show that the incident continuous proton beam when propagating in the plasma generates electron perturbations as well as wakefields oscillations with negative valleys and positive peaks where the proton beams are repelled by the positive wakefields and accelerated by the negative wakefields. Moreover, the quantum correction obviously hinders the electron perturbations as well as the wakefields. Therefore, it is necessary to consider the quantum effects in the interaction of a proton beam with cold dense plasmas, such as in the metal films. supported by National Natural Science Foundation of China (Nos. 11405067, 11105057, 11275007)

  4. Performance Evaluation of the Electrostatic Particle-in-Cell Code hPIC on the Blue Waters Supercomputer

    NASA Astrophysics Data System (ADS)

    Khaziev, Rinat; Mokos, Ryan; Curreli, Davide

    2016-10-01

    The newly-developed hPIC code is a kinetic-kinetic electrostatic Particle-in-Cell application, targeted at large-scale simulations of Plasma-Material Interactions. The code can simulate multi-component strongly-magnetized plasmas in a region close to the wall, including the magnetic sheath/presheath and the first surface layers, which release material impurities. The Poisson solver is based on PETSc conjugate gradient with BoomerAMG algebraic multigrid preconditioners. Scaling tests on the Blue Waters supercomputer have demonstrated good strong-scaling up to 262,144 cores and excellent weak-scaling (tested up to 64,000 cores). In this presentation, we will make an overview of the on-node optimization activities and the main code features, as well as provide a detailed analysis of the results of the verification tests performed. Work supported by the NCSA Faculty Fellowship Program at the National Center for Supercomputing Applications; supercomputing resources provided by Exploratory Blue Waters Allocation.

  5. Towards robust algorithms for current deposition and dynamic load-balancing in a GPU particle in cell code

    NASA Astrophysics Data System (ADS)

    Rossi, Francesco; Londrillo, Pasquale; Sgattoni, Andrea; Sinigardi, Stefano; Turchetti, Giorgio

    2012-12-01

    We present `jasmine', an implementation of a fully relativistic, 3D, electromagnetic Particle-In-Cell (PIC) code, capable of running simulations in various laser plasma acceleration regimes on Graphics-Processing-Units (GPUs) HPC clusters. Standard energy/charge preserving FDTD-based algorithms have been implemented using double precision and quadratic (or arbitrary sized) shape functions for the particle weighting. When porting a PIC scheme to the GPU architecture (or, in general, a shared memory environment), the particle-to-grid operations (e.g. the evaluation of the current density) require special care to avoid memory inconsistencies and conflicts. Here we present a robust implementation of this operation that is efficient for any number of particles per cell and particle shape function order. Our algorithm exploits the exposed GPU memory hierarchy and avoids the use of atomic operations, which can hurt performance especially when many particles lay on the same cell. We show the code multi-GPU scalability results and present a dynamic load-balancing algorithm. The code is written using a python-based C++ meta-programming technique which translates in a high level of modularity and allows for easy performance tuning and simple extension of the core algorithms to various simulation schemes.

  6. A Comparison of ARTEMIS Observations and Particle-in-cell Modeling of the Lunar Photoelectron Sheath in the Terrestrial Magnetotail

    NASA Technical Reports Server (NTRS)

    Poppe, A. R.; Halekas, J. S.; Delory, G. T.; Farrell, W. M.; Angelopoulos, V.; McFadden, J. P.; Bonnell, J. W.; Ergun, R. E.

    2012-01-01

    As an airless body in space with no global magnetic field, the Moon is exposed to both solar ultraviolet radiation and ambient plasmas. Photoemission from solar UV radiation and collection of ambient plasma are typically opposing charging currents and simple charging current balance predicts that the lunar dayside surface should charge positively; however, the two ARTEMIS probes have observed energydependent loss cones and high-energy, surface-originating electron beams above the dayside lunar surface for extended periods in the magnetosphere, which are indicative of negative surface potentials. In this paper, we compare observations by the ARTEMIS P1 spacecraft with a one dimensional particle-in-cell simulation and show that the energy-dependent loss cones and electron beams are due to the presence of stable, non-monotonic, negative potentials above the lunar surface. The simulations also show that while the magnitude of the non-monotonic potential is mainly driven by the incoming electron temperature, the incoming ion temperature can alter this magnitude, especially for periods in the plasma sheet when the ion temperature is more than twenty times the electron temperature. Finally, we note several other plasma phenomena associated with these non-monotonic potentials, such as broadband electrostatic noise and electron cyclotron harmonic emissions, and offer possible generation mechanisms for these phenomena.

  7. Implementation of a 3D version of ponderomotive guiding center solver in particle-in-cell code OSIRIS

    NASA Astrophysics Data System (ADS)

    Helm, Anton; Vieira, Jorge; Silva, Luis; Fonseca, Ricardo

    2016-10-01

    Laser-driven accelerators gained an increased attention over the past decades. Typical modeling techniques for laser wakefield acceleration (LWFA) are based on particle-in-cell (PIC) simulations. PIC simulations, however, are very computationally expensive due to the disparity of the relevant scales ranging from the laser wavelength, in the micrometer range, to the acceleration length, currently beyond the ten centimeter range. To minimize the gap between these despair scales the ponderomotive guiding center (PGC) algorithm is a promising approach. By describing the evolution of the laser pulse envelope separately, only the scales larger than the plasma wavelength are required to be resolved in the PGC algorithm, leading to speedups in several orders of magnitude. Previous work was limited to two dimensions. Here we present the implementation of the 3D version of a PGC solver into the massively parallel, fully relativistic PIC code OSIRIS. We extended the solver to include periodic boundary conditions and parallelization in all spatial dimensions. We present benchmarks for distributed and shared memory parallelization. We also discuss the stability of the PGC solver.

  8. A multi-dimensional, energy- and charge-conserving, nonlinearly implicit, electromagnetic Vlasov–Darwin particle-in-cell algorithm

    SciTech Connect

    Chen, G.; Chacón, L.

    2015-08-11

    For decades, the Vlasov–Darwin model has been recognized to be attractive for particle-in-cell (PIC) kinetic plasma simulations in non-radiative electromagnetic regimes, to avoid radiative noise issues and gain computational efficiency. However, the Darwin model results in an elliptic set of field equations that renders conventional explicit time integration unconditionally unstable. We explore a fully implicit PIC algorithm for the Vlasov–Darwin model in multiple dimensions, which overcomes many difficulties of traditional semi-implicit Darwin PIC algorithms. The finite-difference scheme for Darwin field equations and particle equations of motion is space–time-centered, employing particle sub-cycling and orbit-averaging. This algorithm conserves total energy, local charge, canonical-momentum in the ignorable direction, and preserves the Coulomb gauge exactly. An asymptotically well-posed fluid preconditioner allows efficient use of large cell sizes, which are determined by accuracy considerations, not stability, and can be orders of magnitude larger than required in a standard explicit electromagnetic PIC simulation. Finally, we demonstrate the accuracy and efficiency properties of the algorithm with various numerical experiments in 2D–3V.

  9. A multi-dimensional, energy- and charge-conserving, nonlinearly implicit, electromagnetic Vlasov–Darwin particle-in-cell algorithm

    DOE PAGES

    Chen, G.; Chacón, L.

    2015-08-11

    For decades, the Vlasov–Darwin model has been recognized to be attractive for particle-in-cell (PIC) kinetic plasma simulations in non-radiative electromagnetic regimes, to avoid radiative noise issues and gain computational efficiency. However, the Darwin model results in an elliptic set of field equations that renders conventional explicit time integration unconditionally unstable. We explore a fully implicit PIC algorithm for the Vlasov–Darwin model in multiple dimensions, which overcomes many difficulties of traditional semi-implicit Darwin PIC algorithms. The finite-difference scheme for Darwin field equations and particle equations of motion is space–time-centered, employing particle sub-cycling and orbit-averaging. This algorithm conserves total energy, local charge,more » canonical-momentum in the ignorable direction, and preserves the Coulomb gauge exactly. An asymptotically well-posed fluid preconditioner allows efficient use of large cell sizes, which are determined by accuracy considerations, not stability, and can be orders of magnitude larger than required in a standard explicit electromagnetic PIC simulation. Finally, we demonstrate the accuracy and efficiency properties of the algorithm with various numerical experiments in 2D–3V.« less

  10. A multi-dimensional, energy- and charge-conserving, nonlinearly implicit, electromagnetic Vlasov-Darwin particle-in-cell algorithm

    NASA Astrophysics Data System (ADS)

    Chen, G.; Chacón, L.

    2015-12-01

    For decades, the Vlasov-Darwin model has been recognized to be attractive for particle-in-cell (PIC) kinetic plasma simulations in non-radiative electromagnetic regimes, to avoid radiative noise issues and gain computational efficiency. However, the Darwin model results in an elliptic set of field equations that renders conventional explicit time integration unconditionally unstable. Here, we explore a fully implicit PIC algorithm for the Vlasov-Darwin model in multiple dimensions, which overcomes many difficulties of traditional semi-implicit Darwin PIC algorithms. The finite-difference scheme for Darwin field equations and particle equations of motion is space-time-centered, employing particle sub-cycling and orbit-averaging. The algorithm conserves total energy, local charge, canonical-momentum in the ignorable direction, and preserves the Coulomb gauge exactly. An asymptotically well-posed fluid preconditioner allows efficient use of large cell sizes, which are determined by accuracy considerations, not stability, and can be orders of magnitude larger than required in a standard explicit electromagnetic PIC simulation. We demonstrate the accuracy and efficiency properties of the algorithm with various numerical experiments in 2D-3V.

  11. Physical Fidelity in Particle-In-Cell Modeling of Small Debye-Length Plasmas

    SciTech Connect

    Shadwick, B.A.; Schroeder, C.B.

    2008-08-01

    The connection between macro-particle shape functions and non-physical phase-space"heating" in the particle-in-cell (PIC) algorithm is examined. The development of fine-scale phasespace structures starting from a cold initial condition is shown to be related to spatial correlations in the interpolated fields used in the Lorentz force. It is shown that the plasma evolution via the PIC algorithm from a cold initial condition leads to a state that is not consistent with that of a thermal plasma.

  12. Physical Fidelity in Particle-In-Cell Modeling of Small Debye-Length Plasmas

    SciTech Connect

    Shadwick, B. A.; Schroeder, C. B.

    2009-01-22

    The connection between macro-particle shape functions and non-physical phase-space 'heating' in the particle-in-cell (PIC) algorithm is examined. The development of fine-scale phase-space structures starting from a cold initial condition is shown to be related to spatial correlations in the interpolated fields used in the Lorentz force. It is shown that the plasma evolution via the PIC algorithm from a cold initial condition leads to a state that is not consistent with that of a thermal plasma.

  13. Particle-in-cell modeling of gas-confined barrier discharge

    NASA Astrophysics Data System (ADS)

    Levko, Dmitry; Raja, Laxminarayan L.

    2016-04-01

    Gas-confined barrier discharge is studied using the one-dimensional Particle-in-Cell Monte Carlo Collisions model for the conditions reported by Guerra-Garcia and Martinez-Sanchez [Appl. Phys. Lett. 106, 041601 (2015)]. Depending on the applied voltage, two modes of discharge are observed. In the first mode, the discharge develops in the entire interelectrode gap. In the second mode, the discharge is ignited and develops only in the gas layer having smaller breakdown voltage. The one-dimensional model shows that for the conditions considered, there is no streamer stage of breakdown as is typical for a traditional dielectric barrier discharge.

  14. Geometric integration of the Vlasov-Maxwell system with a variational particle-in-cell scheme

    NASA Astrophysics Data System (ADS)

    Squire, Jonathan; Qin, Hong; Tang, William

    2012-10-01

    A fully variational, unstructured, electromagnetic particle-in-cell integrator is developed for integration of the Vlasov-Maxwell equations. Using the formalism of Discrete Exterior Calculus [1], the field solver, interpolation scheme and particle advance algorithm are derived through minimization of a single discrete field theory action. As a consequence of ensuring that the action is invariant under discrete electromagnetic gauge transformations, the integrator exactly conserves Gauss's law. This work was supported by USDOE Contract DE-AC02-09CH11466.[4pt] [1] M. Desbrun, A. N. Hirani, M. Leok, and J. E. Marsden, (2005), arXiv:math/0508341

  15. A multi-dimensional nonlinearly implicit, electromagnetic Vlasov-Darwin particle-in-cell (PIC) algorithm

    NASA Astrophysics Data System (ADS)

    Chen, Guangye; Chacón, Luis; CoCoMans Team

    2014-10-01

    For decades, the Vlasov-Darwin model has been recognized to be attractive for PIC simulations (to avoid radiative noise issues) in non-radiative electromagnetic regimes. However, the Darwin model results in elliptic field equations that renders explicit time integration unconditionally unstable. Improving on linearly implicit schemes, fully implicit PIC algorithms for both electrostatic and electromagnetic regimes, with exact discrete energy and charge conservation properties, have been recently developed in 1D. This study builds on these recent algorithms to develop an implicit, orbit-averaged, time-space-centered finite difference scheme for the particle-field equations in multiple dimensions. The algorithm conserves energy, charge, and canonical-momentum exactly, even with grid packing. A simple fluid preconditioner allows efficient use of large timesteps, O (√{mi/me}c/veT) larger than the explicit CFL. We demonstrate the accuracy and efficiency properties of the of the algorithm with various numerical experiments in 2D3V.

  16. Validation and Verification of Two Particle-In-Cells Codes for a Glow Discharge

    NASA Astrophysics Data System (ADS)

    Carlsson, Johan; Khrabrov, Alexander V.; Kaganovich, Igor D.; Sommerer, Timothy

    2016-10-01

    The two particle-in-cell codes EDIPIC and LSP were benchmarked and validated for a parallel-plate glow discharge in helium, in which the axial electric field had been carefully measured. Both particle-in-cell codes reproduce very well cathode fall and negative glow regions of the discharge, including formation of high density plasma with very low-energy electrons in negative glow. A detailed code comparison was performed for several synthetic cases of electron-beam injection into helium gas and showed that the codes are in excellent agreement for ionization rate, as well as for elastic and excitation collisions with isotropic scattering pattern. However, electron velocity distribution is anisotropic in the cathode fall, and therefore, a more accurate model of anisotropic scattering in elastic and ionization cross sections needs to be taken into account. In the process of validation several issues with both codes were fixed, including necessity to use modern random generators in both codes, and choose efficient numerical model from EDIPIC for secondary electron emission and circuit model in LSP. This Research was supported by US Department of Energy.

  17. Explicit high-order non-canonical symplectic particle-in-cell algorithms for Vlasov-Maxwell systems

    SciTech Connect

    Xiao, Jianyuan; Liu, Jian; He, Yang; Zhang, Ruili; Qin, Hong; Sun, Yajuan

    2015-11-15

    Explicit high-order non-canonical symplectic particle-in-cell algorithms for classical particle-field systems governed by the Vlasov-Maxwell equations are developed. The algorithms conserve a discrete non-canonical symplectic structure derived from the Lagrangian of the particle-field system, which is naturally discrete in particles. The electromagnetic field is spatially discretized using the method of discrete exterior calculus with high-order interpolating differential forms for a cubic grid. The resulting time-domain Lagrangian assumes a non-canonical symplectic structure. It is also gauge invariant and conserves charge. The system is then solved using a structure-preserving splitting method discovered by He et al. [preprint http://arxiv.org/abs/arXiv:1505.06076 (2015)], which produces five exactly soluble sub-systems, and high-order structure-preserving algorithms follow by combinations. The explicit, high-order, and conservative nature of the algorithms is especially suitable for long-term simulations of particle-field systems with extremely large number of degrees of freedom on massively parallel supercomputers. The algorithms have been tested and verified by the two physics problems, i.e., the nonlinear Landau damping and the electron Bernstein wave.

  18. Explicit high-order non-canonical symplectic particle-in-cell algorithms for Vlasov-Maxwell systems

    SciTech Connect

    Xiao, Jianyuan; Qin, Hong; Liu, Jian; He, Yang; Zhang, Ruili; Sun, Yajuan

    2015-11-01

    Explicit high-order non-canonical symplectic particle-in-cell algorithms for classical particle-field systems governed by the Vlasov-Maxwell equations are developed. The algorithms conserve a discrete non-canonical symplectic structure derived from the Lagrangian of the particle-field system, which is naturally discrete in particles. The electromagnetic field is spatially discretized using the method of discrete exterior calculus with high-order interpolating differential forms for a cubic grid. The resulting time-domain Lagrangian assumes a non-canonical symplectic structure. It is also gauge invariant and conserves charge. The system is then solved using a structure-preserving splitting method discovered by He et al. [preprint arXiv: 1505.06076 (2015)], which produces five exactly soluble sub-systems, and high-order structure-preserving algorithms follow by combinations. The explicit, high-order, and conservative nature of the algorithms is especially suitable for long-term simulations of particle-field systems with extremely large number of degrees of freedom on massively parallel supercomputers. The algorithms have been tested and verified by the two physics problems, i.e., the nonlinear Landau damping and the electron Bernstein wave. (C) 2015 AIP Publishing LLC.

  19. Asymptotic-Preserving Particle-In-Cell methods for the Vlasov-Maxwell system in the quasi-neutral limit

    NASA Astrophysics Data System (ADS)

    Degond, P.; Deluzet, F.; Doyen, D.

    2017-02-01

    In this article, we design Asymptotic-Preserving Particle-In-Cell methods for the Vlasov-Maxwell system in the quasi-neutral limit, this limit being characterized by a Debye length negligible compared to the space scale of the problem. These methods are consistent discretizations of the Vlasov-Maxwell system which, in the quasi-neutral limit, remain stable and are consistent with a quasi-neutral model (in this quasi-neutral model, the electric field is computed by means of a generalized Ohm law). The derivation of Asymptotic-Preserving methods is not straightforward since the quasi-neutral model is a singular limit of the Vlasov-Maxwell model. The key step is a reformulation of the Vlasov-Maxwell system which unifies the two models in a single set of equations with a smooth transition from one to another. As demonstrated in various and demanding numerical simulations, the Asymptotic-Preserving methods are able to treat efficiently both quasi-neutral plasmas and non-neutral plasmas, making them particularly well suited for complex problems involving dense plasmas with localized non-neutral regions.

  20. Explicit high-order non-canonical symplectic particle-in-cell algorithms for Vlasov-Maxwell systems

    NASA Astrophysics Data System (ADS)

    Xiao, Jianyuan; Qin, Hong; Liu, Jian; He, Yang; Zhang, Ruili; Sun, Yajuan

    2015-11-01

    Explicit high-order non-canonical symplectic particle-in-cell algorithms for classical particle-field systems governed by the Vlasov-Maxwell equations are developed. The algorithms conserve a discrete non-canonical symplectic structure derived from the Lagrangian of the particle-field system, which is naturally discrete in particles. The electromagnetic field is spatially discretized using the method of discrete exterior calculus with high-order interpolating differential forms for a cubic grid. The resulting time-domain Lagrangian assumes a non-canonical symplectic structure. It is also gauge invariant and conserves charge. The system is then solved using a structure-preserving splitting method discovered by He et al. [preprint arXiv:1505.06076 (2015)], which produces five exactly soluble sub-systems, and high-order structure-preserving algorithms follow by combinations. The explicit, high-order, and conservative nature of the algorithms is especially suitable for long-term simulations of particle-field systems with extremely large number of degrees of freedom on massively parallel supercomputers. The algorithms have been tested and verified by the two physics problems, i.e., the nonlinear Landau damping and the electron Bernstein wave.

  1. Dynamics of ozone and nitrogen oxides at Summit, Greenland. II. Simulating snowpack chemistry during a spring high ozone event with a 1-D process-scale model

    NASA Astrophysics Data System (ADS)

    Murray, Keenan A.; Kramer, Louisa J.; Doskey, Paul V.; Ganzeveld, Laurens; Seok, Brian; Van Dam, Brie; Helmig, Detlev

    2015-09-01

    Observed depth profiles of nitric oxide (NO), nitrogen dioxide (NO2), and ozone (O3) in snowpack interstitial air at Summit, Greenland were best replicated by a 1-D process-scale model, which included (1) geometrical representation of snow grains as spheres, (2) aqueous-phase chemistry confined to a quasi-liquid layer (QLL) on the surface of snow grains, and (3) initialization of the species concentrations in the QLL through equilibrium partitioning with mixing ratios in snowpack interstitial air. A comprehensive suite of measurements in and above snowpack during a high O3 event facilitated analysis of the relationship between the chemistry of snowpack and the overlying atmosphere. The model successfully reproduced 2 maxima (i.e., a peak near the surface of the snowpack at solar noon and a larger peak occurring in the evening that extended down from 0.5 to 2 m) in the diurnal profile of NO2 within snowpack interstitial air. The maximum production rate of NO2 by photolysis of nitrate (NO3-) was approximately 108 molec cm-3 s-1, which explained daily observations of maxima in NO2 mixing ratios near solar noon. Mixing ratios of NO2 in snowpack interstitial air were greatest in the deepest layers of the snowpack at night and were attributed to thermal decomposition of peroxynitric acid, which produced up to 106 molec NO2 cm-3 s-1. Highest levels of NO in snowpack interstitial air were confined to upper layers of the snowpack and observed profiles were consistent with photolysis of NO2. Production of nitrogen oxides (NOx) from NO3- photolysis was estimated to be two orders of magnitude larger than NO production and supports the hypothesis that NO3- photolysis is the primary source of NOx within sunlit snowpack in the Arctic. Aqueous-phase oxidation of formic acid by O3 resulted in a maximum consumption rate of ∼106-107 molec cm-3 s-1 and was the primary removal mechanism for O3.

  2. Beam Dynamics in an Electron Lens with the Warp Particle-in-cell Code

    SciTech Connect

    Stancari, Giulio; Moens, Vince; Redaelli, Stefano

    2014-07-01

    Electron lenses are a mature technique for beam manipulation in colliders and storage rings. In an electron lens, a pulsed, magnetically confined electron beam with a given current-density profile interacts with the circulating beam to obtain the desired effect. Electron lenses were used in the Fermilab Tevatron collider for beam-beam compensation, for abort-gap clearing, and for halo scraping. They will be used in RHIC at BNL for head-on beam-beam compensation, and their application to the Large Hadron Collider for halo control is under development. At Fermilab, electron lenses will be implemented as lattice elements for nonlinear integrable optics. The design of electron lenses requires tools to calculate the kicks and wakefields experienced by the circulating beam. We use the Warp particle-in-cell code to study generation, transport, and evolution of the electron beam. For the first time, a fully 3-dimensional code is used for this purpose.

  3. A 2D Particle in Cell model for ion extraction and focusing in electrostatic accelerators.

    PubMed

    Veltri, P; Cavenago, M; Serianni, G

    2014-02-01

    Negative ions are fundamental to produce intense and high energy neutral beams used to heat the plasma in fusion devices. The processes regulating the ion extraction involve the formation of a sheath on a scale comparable to the Debye length of the plasma. On the other hand, the ion acceleration as a beam is obtained on distances greater than λD. The paper presents a model for both the phases of ion extraction and acceleration of the ions and its implementation in a numerical code. The space charge of particles is deposited following usual Particle in Cell codes technique, while the field is solved with finite element methods. Some hypotheses on the beam plasma transition are described, allowing to model both regions at the same time. The code was tested with the geometry of the NIO1 negative ions source, and the results are compared with existing ray tracing codes and discussed.

  4. Particle-in-Cell Calculationsof the Electron Cloud in the ILCPositron Damping Ring Wigglers

    SciTech Connect

    Celata, C.M.; Furman, M.A.; Vay, J.-L.; Grote, D.P.

    2007-07-01

    The self-consistent code suite WARP-POSINST is being used to study electron cloud effects in the ILC positron damping ring wiggler. WARP is a parallelized, 3D particle-in-cell code which is fully self-consistent for all species. The POSINST models for the production of photoelectrons and secondary electrons are used to calculate electron creation. Mesh refinement and a moving reference frame for the calculation will be used to reduce the computer time needed by several orders of magnitude. We present preliminary results for cloud buildup showing 3D electron effects at the nulls of the vertical wiggler field. First results from a benchmark of WARP-POSINST vs. POSINST are also discussed.

  5. Vortex particle-in-cell method for three-dimensional viscous unbounded flow computations

    NASA Astrophysics Data System (ADS)

    Liu, Chung Ho; Doorly, Denis J.

    2000-01-01

    A new vortex particle-in-cell (PIC) method is developed for the computation of three-dimensional unsteady, incompressible viscous flow in an unbounded domain. The method combines the advantages of the Lagrangian particle methods for convection and the use of an Eulerian grid to compute the diffusion and vortex stretching. The velocity boundary conditions used in the method are of Dirichlet-type, and can be calculated using the vorticity field on the grid by the Biot-Savart equation. The present results for the propagation speed of the single vortex ring are in good agreement with the Saffman's model. The applications of the method to the head-on and head-off collisions of the two vortex rings show good agreement with the experimental and numerical literature. Copyright

  6. Air-snowpack exchange of bromine, ozone and mercury in the springtime Arctic simulated by the 1-D model PHANTAS - Part 2: Mercury and its speciation

    NASA Astrophysics Data System (ADS)

    Toyota, K.; Dastoor, A. P.; Ryzhkov, A.

    2013-08-01

    Atmospheric mercury depletion events (AMDEs) refer to a recurring depletion of mercury in the springtime Arctic (and Antarctic) boundary layer, occurring, in general, concurrently with ozone depletion events (ODEs). To close some of the knowledge gaps in the physical and chemical mechanisms of AMDEs and ODEs, we have developed a one-dimensional model that simulates multiphase chemistry and transport of trace constituents throughout porous snowpack and in the overlying atmospheric boundary layer (ABL). Building on the model reported in a companion paper (Part 1: In-snow bromine activation and its impact on ozone), we have expanded the chemical mechanism to include the reactions of mercury in the gas- and aqueous-phases with temperature dependence of rate and equilibrium constants accounted for wherever possible. Thus the model allows us to study the chemical and physical processes taking place during ODEs and AMDEs within a single framework where two-way interactions between the snowpack and the atmosphere are simulated in a detailed, process-oriented manner. Model runs are conducted for meteorological and chemical conditions representing the springtime Arctic ABL loaded with "haze" sulfate aerosols and the underlying saline snowpack laid on sea ice. Using recent updates for the Hg + Br \\rightleftarrows HgBr reaction kinetics, we show that the rate and magnitude of photochemical loss of gaseous elemental mercury (GEM) during AMDEs exhibit a strong dependence on the choice of reaction(s) of HgBr subsequent to its formation. At 253 K, the temperature that is presumably low enough for bromine radical chemistry to cause prominent AMDEs as indicated from field observations, the parallel occurrence of AMDEs and ODEs is simulated if the reaction HgBr + BrO is assumed to produce a thermally stable intermediate, Hg(OBr)Br, at the same rate constant as the reaction HgBr + Br. On the contrary, the simulated depletion of atmospheric mercury is notably diminished by not

  7. Air-snowpack exchange of bromine, ozone and mercury in the springtime Arctic simulated by the 1-D model PHANTAS - Part 2: Mercury and its speciation

    NASA Astrophysics Data System (ADS)

    Toyota, K.; Dastoor, A. P.; Ryzhkov, A.

    2014-04-01

    Atmospheric mercury depletion events (AMDEs) refer to a recurring depletion of mercury occurring in the springtime Arctic (and Antarctic) boundary layer, in general, concurrently with ozone depletion events (ODEs). To close some of the knowledge gaps in the physical and chemical mechanisms of AMDEs and ODEs, we have developed a one-dimensional model that simulates multiphase chemistry and transport of trace constituents throughout porous snowpack and in the overlying atmospheric boundary layer (ABL). This paper constitutes Part 2 of the study, describing the mercury component of the model and its application to the simulation of AMDEs. Building on model components reported in Part 1 ("In-snow bromine activation and its impact on ozone"), we have developed a chemical mechanism for the redox reactions of mercury in the gas and aqueous phases with temperature dependent reaction rates and equilibrium constants accounted for wherever possible. Thus the model allows us to study the chemical and physical processes taking place during ODEs and AMDEs within a single framework where two-way interactions between the snowpack and the atmosphere are simulated in a detailed, process-oriented manner. Model runs are conducted for meteorological and chemical conditions that represent the springtime Arctic ABL characterized by the presence of "haze" (sulfate aerosols) and the saline snowpack on sea ice. The oxidation of gaseous elemental mercury (GEM) is initiated via reaction with Br-atom to form HgBr, followed by competitions between its thermal decomposition and further reactions to give thermally stable Hg(II) products. To shed light on uncertain kinetics and mechanisms of this multi-step oxidation process, we have tested different combinations of their rate constants based on published laboratory and quantum mechanical studies. For some combinations of the rate constants, the model simulates roughly linear relationships between the gaseous mercury and ozone concentrations as

  8. Non-native side chain IR probe in peptides: ab initio computation and 1D and 2D IR spectral simulation.

    PubMed

    Zheng, Michael L; Zheng, David C; Wang, Jianping

    2010-02-18

    Infrared frequency region of 2000-2600 cm(-1) (i.e., ca. 4-5 microm in wavelength) is a well-known open spectral window for peptides and proteins. In this work, six unnatural amino acids (unAAs) were designed to have characteristic absorption bands located in this region. Key chemical groups that served as side chains in these unAAs are C[triple bond]C, Phe-C[triple bond]C, N=C=O, N=C=S, P-H, and Si-H, respectively. Cysteine (a natural AA having S-H in side chain) was also studied for comparison. The anharmonic vibrational properties, including frequencies, anharmonicities, and intermode couplings, were examined using the density functional theory. Broadband linear infrared (IR) and two-dimensional (2D) IR spectra were simulated for each molecule. It is found that all of the side chain modes have significant overtone diagonal anharmonicities. All have moderate transition dipole strengths except the C[triple bond]C and S-H stretching modes, in comparison with the C=O stretching mode. In each case, a collection of 2D IR cross peaks were predicted to appear due to the presence of the side chain groups, whose strengths are closely related to the intramolecular anharmonic interactions, and to the transition dipole strengths of the coupled vibrators. Further, potential energy distribution analysis and high-order anharmonic constant computation showed that these IR probes possess a varying degree of mode localization. The results suggest that these IR probes are potentially useful in complementing the well-studied amide-I mode, to investigate structures and dynamics of peptides and proteins.

  9. A particle-in-cell plus Monte Carlo study of plasma-induced damage of normal incidence collector optics used in extreme ultraviolet lithography

    SciTech Connect

    Wieggers, R. C.; Goedheer, W. J.; Akdim, M. R.; Bijkerk, F.; Zegeling, P. A.

    2008-01-01

    We present a kinetic simulation of the plasma formed by photoionization in the intense flux of an extreme ultraviolet lithography (EUVL) light source. The model is based on the particle-in-cell plus Monte Carlo approach. The photoelectric effect and ionization by electron collisions are included. The time evolution of the low density argon plasma is simulated during and after the EUV pulse and the ion-induced sputtering of the coating material of a normal incidence collector mirror is computed. The relation between the time and position at which the ions are created and their final energy is studied, revealing how the evolution and the properties of the sheath influence the amount of sputtered material. The influence of the gas pressure and the source intensity is studied, evaluating the behavior of Ar{sup +} and Ar{sup 2+} ions. A way to reduce the damage to the collector mirror is presented.

  10. Particle-In-Cell Modeling and Analysis of an Electric Antenna for the BepiColombo/MMO spacecraft

    NASA Astrophysics Data System (ADS)

    Miyake, Yohei; Usui, Hideyuki; Kojima, Hirotsugu

    2010-05-01

    The sophisticated calibration of a space-based electric antenna should be performed based on precise knowledge of electric antenna characteristics in space plasma environment. However, it is often difficult to know practical antenna characteristics considering the effects of plasma kinetics and spacecraft-plasma interactions by means of only theoretical approaches. Furthermore, some modern electric field instruments, such as the Cluster EFW instrument and MEFISTO for the BepiColombo/MMO spacecraft, are designed based on a ``hockey puck'' principle, which introduces much complexity in their overall configurations. Thus a strong demand arises regarding the establishment of a numerical method that can solve the complex configuration and plasma dynamics for evaluating the electric properties of such modern instruments. For the self-consistent antenna analysis, we have newly developed an electromagnetic (EM) particle simulation code named EMSES. The code is based on the particle-in-cell technique and also supports a treatment of inner boundaries describing spacecraft conductive surfaces. This enables us to naturally include the effects of the inhomogeneous plasma environment such as a plasma and photoelectron sheaths created around the antenna. The support of the full EM treatment is also important to apply our tool to antenna properties for not only electrostatic (ES) but also EM plasma waves. In the current study, we mainly focus on ES features and photoelectron distribution in the vicinity of the electric field instrument MEFISTO. Our simulation model includes (1) a photoelectron guard electrode, (2) a bias current provided from the spacecraft body to the sensing element, (3) a floating potential treatment for the spacecraft body, and (4) photoelectron emission from sunlit surfaces of the conductive bodies. Of these, the photoelectron guard electrode is a key technology for producing an optimal condition of plasma environment around MEFISTO. Specifically, we

  11. Unphysical kinetic effects in particle-in-cell modeling of laser wakefield accelerators.

    PubMed

    Cormier-Michel, Estelle; Shadwick, B A; Geddes, C G R; Esarey, E; Schroeder, C B; Leemans, W P

    2008-07-01

    Unphysical heating and macroparticle trapping that arise in the numerical modeling of laser wakefield accelerators using particle-in-cell codes are investigated. A dark current free laser wakefield accelerator stage, in which no trapping of background plasma electrons into the plasma wave should occur, and a highly nonlinear cavitated wake with self-trapping, are modeled. Numerical errors can lead to errors in the macroparticle orbits in both phase and momentum. These errors grow as a function of distance behind the drive laser and can be large enough to result in unphysical trapping in the plasma wake. The resulting numerical heating in intense short-pulse laser-plasma interactions grows much faster and to a higher level than the known numerical grid heating of an initially warm plasma in an undriven system. The amount of heating, at least in the region immediately behind the laser pulse, can, in general, be decreased by decreasing the grid size, increasing the number of particles per cell, or using smoother interpolation methods. The effect of numerical heating on macroparticle trapping is less severe in a highly nonlinear cavitated wake, since trapping occurs in the first plasma wave period immediately behind the laser pulse.

  12. Advanced 3D electromagnetic and particle-in-cell modeling on structured/unstructured hybrid grids

    SciTech Connect

    Seidel, D.B.; Pasik, M.F.; Kiefer, M.L.; Riley, D.J.; Turner, C.D.

    1998-01-01

    New techniques have been recently developed that allow unstructured, free meshes to be embedded into standard 3-dimensional, rectilinear, finite-difference time-domain grids. The resulting hybrid-grid modeling capability allows the higher resolution and fidelity of modeling afforded by free meshes to be combined with the simplicity and efficiency of rectilinear techniques. Integration of these new methods into the full-featured, general-purpose QUICKSILVER electromagnetic, Particle-In-Cell (PIC) code provides new modeling capability for a wide variety of electromagnetic and plasma physics problems. To completely exploit the integration of this technology into QUICKSILVER for applications requiring the self-consistent treatment of charged particles, this project has extended existing PIC methods for operation on these hybrid unstructured/rectilinear meshes. Several technical issues had to be addressed in order to accomplish this goal, including the location of particles on the unstructured mesh, adequate conservation of charge, and the proper handling of particles in the transition region between structured and unstructured portions of the hybrid grid.

  13. Validation and benchmarking of two particle-in-cell codes for a glow discharge

    NASA Astrophysics Data System (ADS)

    Carlsson, Johan; Khrabrov, Alexander; Kaganovich, Igor; Sommerer, Timothy; Keating, David

    2017-01-01

    The two particle-in-cell codes EDIPIC and LSP are benchmarked and validated for a parallel-plate glow discharge in helium, in which the axial electric field had been carefully measured, primarily to investigate and improve the fidelity of their collision models. The scattering anisotropy of electron-impact ionization, as well as the value of the secondary-electron emission yield, are not well known in this case. The experimental uncertainty for the emission yield corresponds to a factor of two variation in the cathode current. If the emission yield is tuned to make the cathode current computed by each code match the experiment, the computed electric fields are in excellent agreement with each other, and within about 10% of the experimental value. The non-monotonic variation of the width of the cathode fall with the applied voltage seen in the experiment is reproduced by both codes. The electron temperature in the negative glow is within experimental error bars for both codes, but the density of slow trapped electrons is underestimated. A more detailed code comparison done for several synthetic cases of electron-beam injection into helium gas shows that the codes are in excellent agreement for ionization rate, as well as for elastic and excitation collisions with isotropic scattering pattern. The remaining significant discrepancies between the two codes are due to differences in their electron binary-collision models, and for anisotropic scattering due to elastic and excitation collisions.

  14. GEMPIC: Geometric ElectroMagnetic Particle-In-Cell Methods for the Vlasov-Maxwell System and Gyrokinetics

    NASA Astrophysics Data System (ADS)

    Kraus, Michael; Kormann, Katharina; Sonnendrücker, Eric; Morrison, Philip

    2016-10-01

    In this talk we will describe recent work on the development of geometric particle-in-cell methods for the Vlasov-Maxwell system and gyrokinetics. We present a novel framework for particle-in-cell methods based on the discretization of the underlying Hamiltonian structure of the Vlasov-Maxwell system. We derive semi-discrete Poisson brackets which satisfy the Jacobi identity and apply Hamiltonian splitting schemes for time integration. Techniques from Finite Element Exterior Calculus and spline differential forms ensure conservation of the divergence of the magnetic field and Gauss' law as well as stability of the field solver. The resulting methods are gauge-invariant, feature exact charge conservation show excellent long-time energy behaviour. The talk will be concluded with an outline of how to extend these techniques towards gyrokinetics.

  15. High energy gain in three-dimensional simulations of light sail acceleration

    SciTech Connect

    Sgattoni, A.; Sinigardi, S.; Macchi, A.

    2014-08-25

    The dynamics of radiation pressure acceleration in the relativistic light sail regime are analysed by means of large scale, three-dimensional (3D) particle-in-cell simulations. Differently to other mechanisms, the 3D dynamics leads to faster and higher energy gain than in 1D or 2D geometry. This effect is caused by the local decrease of the target density due to transverse expansion leading to a “lighter sail.” However, the rarefaction of the target leads to an earlier transition to transparency limiting the energy gain. A transverse instability leads to a structured and inhomogeneous ion distribution.

  16. Solution of the field equations for 2-D electromagnetic direct implicit plasma simulation

    NASA Astrophysics Data System (ADS)

    Hewett, D. W.; Langdon, A. B.

    1985-01-01

    A direct implicit particle-in-cell (PIC) simulation model with full electromagnetic (EM) effects has been implemented in 2-D Cartesian geometry. The model, implemented with the D1 time differencing scheme, was first implemented in a 1-D electrostatic (ES) version to gain some experience with spatial differencing in forms suitable for extension to the full EM field in two dimensions. The implicit EM field solve is considerably different from the implicit ES code. The EM field calculation requires an inductive part as well as the electrostatic and the B field must be self-consistently advanced.

  17. TWANG-PIC, a novel gyro-averaged one-dimensional particle-in-cell code for interpretation of gyrotron experiments

    SciTech Connect

    Braunmueller, F. Tran, T. M.; Alberti, S.; Genoud, J.; Hogge, J.-Ph.; Tran, M. Q.; Vuillemin, Q.

    2015-06-15

    A new gyrotron simulation code for simulating the beam-wave interaction using a monomode time-dependent self-consistent model is presented. The new code TWANG-PIC is derived from the trajectory-based code TWANG by describing the electron motion in a gyro-averaged one-dimensional Particle-In-Cell (PIC) approach. In comparison to common PIC-codes, it is distinguished by its computation speed, which makes its use in parameter scans and in experiment interpretation possible. A benchmark of the new code is presented as well as a comparative study between the two codes. This study shows that the inclusion of a time-dependence in the electron equations, as it is the case in the PIC-approach, is mandatory for simulating any kind of non-stationary oscillations in gyrotrons. Finally, the new code is compared with experimental results and some implications of the violated model assumptions in the TWANG code are disclosed for a gyrotron experiment in which non-stationary regimes have been observed and for a critical case that is of interest in high power gyrotron development.

  18. Towards a fully kinetic 3D electromagnetic particle-in-cell model of streamer formation and dynamics in high-pressure electronegative gases

    NASA Astrophysics Data System (ADS)

    Rose, D. V.; Welch, D. R.; Clark, R. E.; Thoma, C.; Zimmerman, W. R.; Bruner, N.; Rambo, P. K.; Atherton, B. W.

    2011-09-01

    Streamer and leader formation in high pressure devices is dynamic process involving a broad range of physical phenomena. These include elastic and inelastic particle collisions in the gas, radiation generation, transport and absorption, and electrode interactions. Accurate modeling of these physical processes is essential for a number of applications, including high-current, laser-triggered gas switches. Towards this end, we present a new 3D implicit particle-in-cell simulation model of gas breakdown leading to streamer formation in electronegative gases. The model uses a Monte Carlo treatment for all particle interactions and includes discrete photon generation, transport, and absorption for ultra-violet and soft x-ray radiation. Central to the realization of this fully kinetic particle treatment is an algorithm that manages the total particle count by species while preserving the local momentum distribution functions and conserving charge [D. R. Welch, T. C. Genoni, R. E. Clark, and D. V. Rose, J. Comput. Phys. 227, 143 (2007)]. The simulation model is fully electromagnetic, making it capable of following, for example, the evolution of a gas switch from the point of laser-induced localized breakdown of the gas between electrodes through the successive stages of streamer propagation, initial electrode current connection, and high-current conduction channel evolution, where self-magnetic field effects are likely to be important. We describe the model details and underlying assumptions used and present sample results from 3D simulations of streamer formation and propagation in SF6.

  19. Implementation of a flexible and scalable particle-in-cell method for massively parallel computations in the mantle convection code ASPECT

    NASA Astrophysics Data System (ADS)

    Gassmöller, Rene; Bangerth, Wolfgang

    2016-04-01

    Particle-in-cell methods have a long history and many applications in geodynamic modelling of mantle convection, lithospheric deformation and crustal dynamics. They are primarily used to track material information, the strain a material has undergone, the pressure-temperature history a certain material region has experienced, or the amount of volatiles or partial melt present in a region. However, their efficient parallel implementation - in particular combined with adaptive finite-element meshes - is complicated due to the complex communication patterns and frequent reassignment of particles to cells. Consequently, many current scientific software packages accomplish this efficient implementation by specifically designing particle methods for a single purpose, like the advection of scalar material properties that do not evolve over time (e.g., for chemical heterogeneities). Design choices for particle integration, data storage, and parallel communication are then optimized for this single purpose, making the code relatively rigid to changing requirements. Here, we present the implementation of a flexible, scalable and efficient particle-in-cell method for massively parallel finite-element codes with adaptively changing meshes. Using a modular plugin structure, we allow maximum flexibility of the generation of particles, the carried tracer properties, the advection and output algorithms, and the projection of properties to the finite-element mesh. We present scaling tests ranging up to tens of thousands of cores and tens of billions of particles. Additionally, we discuss efficient load-balancing strategies for particles in adaptive meshes with their strengths and weaknesses, local particle-transfer between parallel subdomains utilizing existing communication patterns from the finite element mesh, and the use of established parallel output algorithms like the HDF5 library. Finally, we show some relevant particle application cases, compare our implementation to a

  20. Multiscale Coupling of Monte Carlo Binary-Collision-Approximation Codes with Particle-in-Cells for Plasma-Material Interaction

    NASA Astrophysics Data System (ADS)

    Curreli, Davide; Lindquist, Kyle; Ruzic, David N.

    2013-10-01

    Techniques based on Monte Carlo Binary Collision Approximation (BCA) are widely used for the evaluation of particle interactions with matter, but rarely coupled with a consistent kinetic plasma solver like a Particle-in-Cell. The TRIM code [Eckstein; Biersack and Haggmark, 1980] and its version including dynamic-composition TRIDYN [Moller and Eckstein, 1984] are two popular implementations of BCA, where single-particle projectiles interact with a target of amorphous material according to the classical Carbon-Krypton interaction potential. The effect of surface roughness can be included as well, thanks to the Fractal-TRIM method [Ruzic and Chiu, 1989]. In the present study we couple BCA codes with Particles-in-Cells. The Lagrangian treatment of particle motion usually implemented in PiC codes suggests a natural coupling of PiC's with BCA's, even if a number of caveats has to be taken into account, related to the discrete nature of computational particles, to the difference between the two approaches and most important to the multiple spatial and temporal scales involved. The break down of BCA at low energies (unless the projectiles are channeling through an oriented crystal layer [Hobler and Betz, 2001]) has been supplemented by Yamamura's semi-empirical relations.

  1. The IBEX Ribbon and the Pickup Ion Ring Stability in the Outer Heliosheath II. Monte-Carlo and Particle-in-cell Model Results

    NASA Astrophysics Data System (ADS)

    Niemiec, J.; Florinski, V.; Heerikhuisen, J.; Nishikawa, K.-I.

    2016-08-01

    The nearly circular ribbon of energetic neutral atom (ENA) emission discovered by NASA’s Interplanetary Boundary EXplorer satellite (IBEX), is most commonly attributed to the effect of charge exchange of secondary pickup ions (PUIs) gyrating about the magnetic field in the outer heliosheath (OHS) and the interstellar space beyond. The first paper in the series (Paper I) presented a theoretical analysis of the pickup process in the OHS and hybrid-kinetic simulations, revealing that the kinetic properties of freshly injected proton rings depend sensitively on the details of their velocity distribution. It was demonstrated that only rings that are not too narrow (parallel thermal spread above a few km s-1) and not too wide (parallel temperature smaller than the core plasma temperature) could remain stable for a period of time long enough to generate ribbon ENAs. This paper investigates the role of electron dynamics and the extra spatial degree of freedom in the ring ion scattering process with the help of two-dimensional full particle-in-cell (PIC) kinetic simulations. A good agreement is observed between ring evolution under unstable conditions in hybrid and PIC models, and the dominant modes are found to propagate parallel to the magnetic field. We also present more realistic ribbon PUI distributions generated using Monte Carlo simulations of atomic hydrogen in the global heliosphere and examine the effect of both the cold ring-like and the hot “halo” PUIs produced from heliosheath ENAs on the ring stability. It is shown that the second PUI population enhances the fluctuation growth rate, leading to faster isotropization of the solar-wind-derived ring ions.

  2. GIS-BASED 1-D DIFFUSIVE WAVE OVERLAND FLOW MODEL

    SciTech Connect

    KALYANAPU, ALFRED; MCPHERSON, TIMOTHY N.; BURIAN, STEVEN J.

    2007-01-17

    This paper presents a GIS-based 1-d distributed overland flow model and summarizes an application to simulate a flood event. The model estimates infiltration using the Green-Ampt approach and routes excess rainfall using the 1-d diffusive wave approximation. The model was designed to use readily available topographic, soils, and land use/land cover data and rainfall predictions from a meteorological model. An assessment of model performance was performed for a small catchment and a large watershed, both in urban environments. Simulated runoff hydrographs were compared to observations for a selected set of validation events. Results confirmed the model provides reasonable predictions in a short period of time.

  3. Three-Dimensional Particle-in-Cell Simulations of Wave Excitation by Conventional and Parametric Antennas in the Ionospheric Plasma

    NASA Astrophysics Data System (ADS)

    Main, Daniel; Kim, Tony; Caplinger, James; Sotnokiv, Vladimir; Paraschiv, I.; Rose, David

    2015-11-01

    Conventional antennas immersed in a cold, magnetized plasma (CMP) and operating in the very low frequency (VLF) range (e.g. loop and dipole antennas) excite predominately the electrostatic part of the wave spectrum. For example, loop antennas excited in the frequency range ωLH < ω <ωce produce electrostatic lower oblique resonance (LOR) waves. The goal of our research is to increase power radiated into the electromagnetic part of the VLF wave spectrum. Electromagnetic whistler waves are generated due to a nonlinear coupling of LOR and ion acoustic (IA) waves inside a plasma volume around two conventional antennas. Ion acoustic type density perturbations can be excited by a conventional dipole antenna with frequencies in the range ωci < ω <ωLH . In this poster we show three-dimensional electric field patterns from the loop and dipole antennas and the EM spectrum excited due to the parametric interaction. (NOTE: LH = lower hybrid, ce = electron cyclotron,ci=ion cyclotron).

  4. Particle-In-Cell Multi-Algorithm Numerical Test-Bed

    NASA Astrophysics Data System (ADS)

    Meyers, M. D.; Yu, P.; Tableman, A.; Decyk, V. K.; Mori, W. B.

    2015-11-01

    We describe a numerical test-bed that allows for the direct comparison of different numerical simulation schemes using only a single code. It is built from the UPIC Framework, which is a set of codes and modules for constructing parallel PIC codes. In this test-bed code, Maxwell's equations are solved in Fourier space in two dimensions. One can readily examine the numerical properties of a real space finite difference scheme by including its operators' Fourier space representations in the Maxwell solver. The fields can be defined at the same location in a simulation cell or can be offset appropriately by half-cells, as in the Yee finite difference time domain scheme. This allows for the accurate comparison of numerical properties (dispersion relations, numerical stability, etc.) across finite difference schemes, or against the original spectral scheme. We have also included different options for the charge and current deposits, including a strict charge conserving current deposit. The test-bed also includes options for studying the analytic time domain scheme, which eliminates numerical dispersion errors in vacuum. We will show examples from the test-bed that illustrate how the properties of some numerical instabilities vary between different PIC algorithms. Work supported by the NSF grant ACI 1339893 and DOE grant DE-SC0008491.

  5. Electron hole tracking PIC simulation

    NASA Astrophysics Data System (ADS)

    Zhou, Chuteng; Hutchinson, Ian

    2016-10-01

    An electron hole is a coherent BGK mode solitary wave. Electron holes are observed to travel at high velocities relative to bulk plasmas. The kinematics of a 1-D electron hole is studied using a novel Particle-In-Cell simulation code with fully kinetic ions. A hole tracking technique enables us to follow the trajectory of a fast-moving solitary hole and study quantitatively hole acceleration and coupling to ions. The electron hole signal is detected and the simulation domain moves by a carefully designed feedback control law to follow its propagation. This approach has the advantage that the length of the simulation domain can be significantly reduced to several times the hole width, which makes high resolution simulations tractable. We observe a transient at the initial stage of hole formation when the hole accelerates to several times the cold-ion sound speed. Artificially imposing slow ion speed changes on a fully formed hole causes its velocity to change even when the ion stream speed in the hole frame greatly exceeds the ion thermal speed, so there are no reflected ions. The behavior that we observe in numerical simulations agrees very well with our analytic theory of hole momentum conservation and energization effects we call ``jetting''. The work was partially supported by the NSF/DOE Basic Plasma Science Partnership under Grant DE-SC0010491. Computer simulations were carried out on the MIT PSFC parallel AMD Opteron/Infiniband cluster Loki.

  6. Numerical analysis of direct-current microdischarge for space propulsion applications using the particle-in-cell/Monte Carlo collision (PIC/MCC) method

    NASA Astrophysics Data System (ADS)

    Kong, Linghan; Wang, Weizong; Murphy, Anthony B.; Xia, Guangqing

    2017-04-01

    Microdischarges are an important type of plasma discharge that possess several unique characteristics, such as the presence of a stable glow discharge, high plasma density and intense excimer radiation, leading to several potential applications. The intense and controllable gas heating within the extremely small dimensions of microdischarges has been exploited in micro-thruster technologies by incorporating a micro-nozzle to generate the thrust. This kind of micro-thruster has a significantly improved specific impulse performance compared to conventional cold gas thrusters, and can meet the requirements arising from the emerging development and application of micro-spacecraft. In this paper, we performed a self-consistent 2D particle-in-cell simulation, with a Monte Carlo collision model, of a microdischarge operating in a prototype micro-plasma thruster with a hollow cylinder geometry and a divergent micro-nozzle. The model takes into account the thermionic electron emission including the Schottky effect, the secondary electron emission due to cathode bombardment by the plasma ions, several different collision processes, and a non-uniform argon background gas density in the cathode–anode gap. Results in the high-pressure (several hundreds of Torr), high-current (mA) operating regime showing the behavior of the plasma density, potential distribution, and energy flux towards the hollow cathode and anode are presented and discussed. In addition, the results of simulations showing the effect of different argon gas pressures, cathode material work function and discharge voltage on the operation of the microdischarge thruster are presented. Our calculated properties are compared with experimental data under similar conditions and qualitative and quantitative agreements are reached.

  7. Simulating An Acceleration Schedule For NDCX-II

    SciTech Connect

    Sharp, W M; Friedman, A; Grote, D P; Henestroza, E; Leitner, M A; Waldron, W L

    2009-05-18

    The Virtual National Laboratory for Heavy-Ion Fusion Science is developing a physics design for NDCX-II, an experiment to study warm dense matter heated by ions. Present plans call for using 34 induction cells to accelerate 45 nC of Li{sup +} ions to more than 3 MeV, followed by neutralized drift-compression. To heat targets to the desired temperatures, the beam must be compressed to a millimeter-scale radius and a duration of about 1 ns. A novel NDCX-II acceleration schedule has been developed using an interactive one-dimensional particle-in-cell simulation ASP to model the longitudinal physics and axisymmetric WARP simulations to validate the 1-D model and add transverse focusing. Three-dimensional Warp runs have been used recently to study the sensitivity to misalignments in the focusing solenoids.

  8. SIMULATING AN ACCELERATION SCHEDULE FOR NDCX-II

    SciTech Connect

    Sharp, W.M.; Friedman, A.; Grote, D.P.; Henestroza, E.; Leitner, M.A.; Waldron, W.L.

    2009-05-01

    The Virtual National Laboratory for Heavy-Ion Fusion Science is developing a physics design for NDCX-II, an experiment to study warm dense matter heated by ions. Present plans call for using 34 induction cells to accelerate 45 nC of Li+ ions to more than 3 MeV, followed by neutralized drift-compression. To heat targets to the desired temperatures, the beam must be compressed to a millimeter-scale radius and a duration of about 1 ns. A novel NDCX-II acceleration schedule has been developed using an interactive one-dimensional particle-in-cell simulation ASP to model the longitudinal physics and axisymmetric WARP simulations to validate the 1-D model and add transverse focusing. Three-dimensional Warp runs have been used recently to study the sensitivity to misalignments in the focusing solenoids.

  9. A non-stochastic Coulomb collision algorithm for particle-in-cell methods

    NASA Astrophysics Data System (ADS)

    Chen, Guangye; Chacon, Luis

    2016-10-01

    Coulomb collision modules in PIC simulations are typically Monte-Carlo-based. Monte Carlo is attractive for its simplicity, efficiency in high dimensions, and conservation properties. However, it is noisy, of low temporal order (typically O(√{ Δt }), and has to resolve the collision frequency for accuracy. In this study, we explore a non-stochastic, multiscale alternative to Monte Carlo for PIC. The approach is based on a Green-function-based reformulation of the Vlasov-Fokker-Planck equation, which can be readily incorporated in modern multiscale collisionless PIC algorithms. An asymptotic-preserving operator splitting approach allows the collisional step to be treated independently from the particles while preserving the multiscale character of the method. A significant element of novelty in our algorithm is the use of a machine learning algorithm that avoid a velocity space mesh for the collision step. The resulting algorithm is non-stochastic and first-order-accurate in time. We will demonstrate the method with several relaxation examples.

  10. Numerical studies of petawatt laser-driven proton generation from two-species targets using a two-dimensional particle-in-cell code

    NASA Astrophysics Data System (ADS)

    Domański, J.; Badziak, J.; Jabloński, S.

    2016-04-01

    Laser-driven generation of high-energy ion beams has recently attracted considerable interest due to a variety of potential applications including proton radiography, ICF fast ignition, nuclear physics or hadron therapy. The ion beam parameters depend on both laser pulse and target parameters, and in order to produce the ion beam of properties required for a particular application the laser and target parameters must be carefully selected, and the mechanism of the ion beam generation should be well understood and controlled. Convenient and commonly used tools for studies of the ion acceleration process are particle-in-cell (PIC) codes. Using two-dimensional PIC simulations, the properties of a proton beam generated from a thin erbium hydride (ErH3) target irradiated by a 25fs laser pulse of linear or circular polarization and of intensity ranging from 1020 to 1021 W/cm2 are investigated and compared with the features of a proton beam produced from a hydrocarbon (CH) target. It has been found that using erbium hydride targets instead of hydrocarbon ones creates an opportunity to generate more compact proton beams of higher mean energy, intensity and of better collimation. This is especially true for the linear polarization of the laser beam, for which the mean proton energy, the amount of high energy protons and the intensity of the proton beam generated from the hydride target is by an order of magnitude higher than for the hydrocarbon target. For the circular polarization, the proton beam parameters are lower than those for the linear one, and the effect of target composition on the acceleration process is weaker.

  11. Modeling of the Plasma Electrode Bias in the Negative Ion Sources with 1D PIC Method

    SciTech Connect

    Matsushita, D.; Kuppel, S.; Hatayama, A.; Fukano, A.; Bacal, M.

    2009-03-12

    The effect of the plasma electrode bias voltage in the negative ion sources is modeled and investigated with one-dimensional plasma simulation. A particle-in-cell (PIC) method is applied to simulate the motion of charged particles in their self-consistent electric field. In the simulation, the electron current density is fixed to produce the bias voltage. The tendency of current-voltage characteristics obtained in the simulation show agreement with the one obtained from a simple probe theory. In addition, the H{sup -} ion density peak appears at the bias voltage close to the plasma potential as observed in the experiment. The physical mechanism of this peak H{sup -} ion density is discussed.

  12. Electromagnetic direct implicit PIC simulation

    SciTech Connect

    Langdon, A.B.

    1983-03-29

    Interesting modelling of intense electron flow has been done with implicit particle-in-cell simulation codes. In this report, the direct implicit PIC simulation approach is applied to simulations that include full electromagnetic fields. The resulting algorithm offers advantages relative to moment implicit electromagnetic algorithms and may help in our quest for robust and simpler implicit codes.

  13. EMODEL_1D v. 1.0

    SciTech Connect

    Aldridge, David F.

    2016-07-06

    Program EMODEL_1D is an electromagnetic earth model construction utility designed to generate a three-dimensional (3D) uniformly-gridded representation of one-dimensional (1D) layered earth model. Each layer is characterized by the isotropic EM properties electric permittivity ?, magnetic permeability ?, and current conductivity ?. Moreover, individual layers of the model may possess a linear increase/decrease of any or all of these properties with depth.

  14. An improved iteration loop for the three dimensional quasi-static particle-in-cell algorithm: QuickPIC

    SciTech Connect

    An, Weiming; Decyk, Viktor K.; Mori, Warren B.; Antonsen, Thomas M.

    2013-10-01

    We present improvements to the three-dimensional (3D) quasi-static particle-in-cell (PIC) algorithm, which is used to efficiently model short-pulse laser and particle beam–plasma interactions. In this algorithm the fields including the index of refraction created by a static particle/laser beam are calculated. These fields are then used to advance the particle/laser beam forward in time (distance). For a 3D quasi-static code, calculating the wake fields is done using a two-dimensional (2D) PIC code where the time variable is ξ=ct-z and z is the propagation direction of the particle/laser beam. When calculating the wake, the fields, particle positions and momenta are not naturally time centered so an iterative predictor corrector loop is required. In the previous iterative loop in QuickPIC (currently the only 3D quasi-static PIC code), the field equations are derived using the Lorentz gauge. Here we describe a new algorithm which uses gauge independent field equations. It is found that with this new algorithm, the results converge to the results from fully explicitly PIC codes with far fewer iterations (typically 1 iteration as compared to 2–8) for a wide range of problems. In addition, we describe a new deposition scheme for directly depositing the time derivative of the current that is needed in one of the field equations. The new deposition scheme does not require message passing for the particles inside the iteration loop, which greatly improves the speed for parallelized calculations. Comparisons of results from the new and old algorithms and to fully explicit PIC codes are also presented.

  15. Air-snowpack exchange of bromine, ozone and mercury in the springtime Arctic simulated by the 1-D model PHANTAS - Part 1: In-snow bromine activation and its impact on ozone

    NASA Astrophysics Data System (ADS)

    Toyota, K.; McConnell, J. C.; Staebler, R. M.; Dastoor, A. P.

    2013-08-01

    To provide a theoretical framework towards better understanding of ozone depletion events (ODEs) and atmospheric mercury depletion events (AMDEs) in the polar boundary layer, we have developed a one-dimensional model that simulates multiphase chemistry and transport of trace constituents from porous snowpack and through the atmospheric boundary layer (ABL) as a unified system. In this paper, we describe a general configuration of the model and the results of simulations related to reactive bromine release from the snowpack and ODEs during the Arctic spring. The model employs a chemical mechanism adapted from the one previously used for the simulation of multiphase halogen chemistry involving deliquesced sea-salt aerosols in the marine boundary layer. A common set of aqueous-phase reactions describe chemistry both in the liquid-like (or brine) layer on the grain surface of the snowpack and in "haze" aerosols mainly composed of sulfate in the atmosphere. The process of highly soluble/reactive trace gases, whether entering the snowpack from the atmosphere or formed via gas-phase chemistry in the snowpack interstitial air (SIA), is simulated by the uptake on brine-covered snow grains and subsequent reactions in the aqueous phase while being traveled vertically within the SIA. A "bromine explosion", by which, in a conventional definition, HOBr formed in the ambient air is deposited and then converted heterogeneously to Br2, is a dominant process of reactive bromine formation in the top 1 mm (or less) layer of the snowpack. Deeper in the snowpack, HOBr formed within the SIA leads to an in-snow bromine explosion, but a significant fraction of Br2 is also produced via aqueous radical chemistry in the brine on the surface of the snow grains. These top- and deeper-layer productions of Br2 both contribute to the Br2 release into the atmosphere, but the deeper-layer production is found to be more important for the net outflux of reactive bromine. Although ozone is removed via

  16. 1-D blood flow modelling in a running human body.

    PubMed

    Szabó, Viktor; Halász, Gábor

    2017-04-10

    In this paper an attempt was made to simulate blood flow in a mobile human arterial network, specifically, in a running human subject. In order to simulate the effect of motion, a previously published immobile 1-D model was modified by including an inertial force term into the momentum equation. To calculate inertial force, gait analysis was performed at different levels of speed. Our results show that motion has a significant effect on the amplitudes of the blood pressure and flow rate but the average values are not effected significantly.

  17. Heat Capacity of 1D Molecular Chains

    NASA Astrophysics Data System (ADS)

    Bagatskii, M. I.; Barabashko, M. S.; Sumarokov, V. V.; Jeżowski, A.; Stachowiak, P.

    2017-04-01

    The heat capacity of 1D chains of nitrogen and methane molecules (adsorbed in the outer grooves of bundles of closed-cap single-walled carbon nanotubes) has been studied in the temperature ranges 2-40 and 2-60 K, respectively. The temperature dependence of the heat capacity of 1D chains of nitrogen molecules below 3 K is close to a linear. It was found that the rotational heat capacity of methane molecules is a significant part of the total heat capacity of the chains throughout the whole investigated temperature range, whereas in the case of nitrogen, the librations are significant only above 15 K. The dependence of the heat capacity for methane below 10 K indicates the presence of a Schottky anomaly caused by the tunneling between the lowest energy levels of the CH4 molecule rotational spectra. Characteristic features observed in the temperature dependence of the heat capacity of 1D methane crystals are also discussed.

  18. Upstream Design and 1D-CAE

    NASA Astrophysics Data System (ADS)

    Sawada, Hiroyuki

    Recently, engineering design environment of Japan is changing variously. Manufacturing companies are being challenged to design and bring out products that meet the diverse demands of customers and are competitive against those produced by rising countries(1). In order to keep and strengthen the competitiveness of Japanese companies, it is necessary to create new added values as well as conventional ones. It is well known that design at the early stages has a great influence on the final design solution. Therefore, design support tools for the upstream design is necessary for creating new added values. We have established a research society for 1D-CAE (1 Dimensional Computer Aided Engineering)(2), which is a general term for idea, methodology and tools applicable for the upstream design support, and discuss the concept and definition of 1D-CAE. This paper reports our discussion about 1D-CAE.

  19. Helical Floquet Channels in 1D Lattices

    NASA Astrophysics Data System (ADS)

    Budich, Jan Carl; Hu, Ying; Zoller, Peter

    2017-03-01

    We show how dispersionless channels exhibiting perfect spin-momentum locking can arise in a 1D lattice model. While such spectra are forbidden by fermion doubling in static 1D systems, here we demonstrate their appearance in the stroboscopic dynamics of a periodically driven system. Remarkably, this phenomenon does not rely on any adiabatic assumptions, in contrast to the well known Thouless pump and related models of adiabatic spin pumps. The proposed setup is shown to be experimentally feasible with state-of-the-art techniques used to control ultracold alkaline earth atoms in optical lattices.

  20. Simulating LGM retreat of the Uummannaq Ice Stream and Rinks Isbrae, Western Greenland using a 1-D ice-stream model constrained by a suite of marine and terrestrial data

    NASA Astrophysics Data System (ADS)

    Jamieson, Stewart; Roberts, Dave; Rea, Brice; Lane, Timothy; Vieli, Andreas; Cofaigh, Colm Ó.

    2014-05-01

    We aim to understand what controlled the retreat pattern of the Uummannaq Ice Stream (UIS) during the last deglaciation. Evidence for the pattern of retreat is found in both the marine and terrestrial realms, but because the evidence is temporally and spatially discontinuous, it is challenging to coherently reconstruct both grounding-line retreat and ice-surface thinning such that they are in agreement. Marine stratigraphic and geophysical evidence indicates that the ice stream was grounded close to the continental shelf edge at the Last Glacial Maximum, and retreated rapidly and nonlinearly after 14.8 ka. Cosmogenic nuclide exposure dating on Ubekendt Island at the convergence zone of multiple feeder ice streams show that the ice surface thinned progressively and that the island became ice-free by ca. 12.4 ka. The ice stream then collapsed over the next 1-1.6 kyrs and the ice stream separated into a series of distinct inland arms. In the northernmost Rinks system, there is a 'staircase' of evidence showing ice surface thinning over time, but it is unclear where the grounding line was located during this phase of thinning. Furthermore, it is currently unclear what controlled the nonlinear retreat pattern identified in the Uummannaq system. We develop a numerical model of ice-stream retreat using the marine geophysical data and measurements of sediment strength on the continental shelf to control the boundary conditions. The model has the capability to dynamically and robustly simulate grounding line-retreat behaviour over millennial timescales. We simulate the retreat of the UIS grounding line into the northernmost Rinks system in response to enhanced ocean warming, rising sea level and warming climate. We compare the simulated dynamic behaviour of the UIS against the geomorphological and cosmogenic exposure evidence for ice surface thinning onshore and against dated marine grounding line positions. Our model results enable us to match grounding-line positions in

  1. The stability of 1-D soliton in transverse direction

    NASA Astrophysics Data System (ADS)

    Verma, Deepa; Bera, Ratan Kumar; Das, Amita; Kaw, Predhiman

    2016-12-01

    The complete characterization of the exact 1-D solitary wave solutions (both stationary and propagating) for light plasma coupled system have been studied extensively in the parameter space of light frequency and the group speed [Poornakala et al., Phys. Plasmas 9(5), 1820 (2002)]. It has been shown in 1-D that solutions with single light wave peak and paired structures are stable and hence long lived. However, solutions having multiple peaks of light wave are unstable due to Raman scattering instability [Saxena et al., Phys. Plasmas 14, 072307 (2007)]. Here, we have shown with the help of 2-D fluid simulation that single peak and paired solutions too get destabilized by the transverse filamentation instability. The numerical growth rates obtained from simulations is seen to compare well with the analytical values. It is also shown that multiple peaks solitons first undergo the regular 1-D forward Raman scattering instability. Subsequently, they undergo a distinct second phase of destabilization through transverse filamentation instability. This is evident from the structure as well as the plot of the perturbed energy which shows a second phase of growth after saturating initially. The growth rate of the filamentation instability being comparatively slower than the forward Raman instability this phase comes quite late and is clearly distinguishable.

  2. Response of plasma facing components in Tokamaks due to intense energy deposition using Particle-In-Cell (PIC) methods

    NASA Astrophysics Data System (ADS)

    Genco, Filippo

    Damage to plasma-facing components (PFC) due to various plasma instabilities is still a major concern for the successful development of fusion energy and represents a significant research obstacle in the community. It is of great importance to fully understand the behavior and lifetime expectancy of PFC under both low energy cycles during normal events and highly energetic events as disruptions, Edge-Localized Modes (ELM), Vertical Displacement Events (VDE), and Run-away electron (RE). The consequences of these high energetic dumps with energy fluxes ranging from 10 MJ/m2 up to 200 MJ/m 2 applied in very short periods (0.1 to 5 ms) can be catastrophic both for safety and economic reasons. Those phenomena can cause a) large temperature increase in the target material b) consequent melting, evaporation and erosion losses due to the extremely high heat fluxes c) possible structural damage and permanent degradation of the entire bulk material with probable burnout of the coolant tubes; d) plasma contamination, transport of target material into the chamber far from where it was originally picked. The modeling of off-normal events such as Disruptions and ELMs requires the simultaneous solution of three main problems along time: a) the heat transfer in the plasma facing component b) the interaction of the produced vapor from the surface with the incoming plasma particles c) the transport of the radiation produced in the vapor-plasma cloud. In addition the moving boundaries problem has to be considered and solved at the material surface. Considering the carbon divertor as target, the moving boundaries are two since for the given conditions, carbon doesn't melt: the plasma front and the moving eroded material surface. The current solution methods for this problem use finite differences and moving coordinates system based on the Crank-Nicholson method and Alternating Directions Implicit Method (ADI). Currently Particle-In-Cell (PIC) methods are widely used for solving

  3. Quantum and semi-classical transport in RTDs using NEMO 1-D

    NASA Technical Reports Server (NTRS)

    Klimeck, G.; Stout, P.; Bowen, R. C.

    2003-01-01

    NEMO 1-D has been developed primarily for the simulation of resonant tunneling diodes, and quantitative and predictive agreements with experimental high performance, high current density devices have been achieved in the past.

  4. Glass-based 1-D dielectric microcavities

    NASA Astrophysics Data System (ADS)

    Chiasera, Alessandro; Scotognella, Francesco; Valligatla, Sreeramulu; Varas, Stefano; Jasieniak, Jacek; Criante, Luigino; Lukowiak, Anna; Ristic, Davor; Gonçalves, Rogeria Rocha; Taccheo, Stefano; Ivanda, Mile; Righini, Giancarlo C.; Ramponi, Roberta; Martucci, Alessandro; Ferrari, Maurizio

    2016-11-01

    We have developed a reliable RF sputtering techniques allowing to fabricate glass-based one dimensional microcavities, with high quality factor. This property is strongly related to the modification of the density of states due to the confinement of the gain medium in a photonic band gap structure. In this short review we present some of the more recent results obtained by our team exploiting these 1D microcavities. In particular we present: (1) Er3+ luminescence enhancement of the 4I13/2 → 4I15/2 transition; (2) broad band filters based on disordered 1-D photonic structures; (3) threshold defect-mode lasing action in a hybrid structure.

  5. Centrosome Positioning in 1D Cell Migration

    NASA Astrophysics Data System (ADS)

    Adlerz, Katrina; Aranda-Espinoza, Helim

    During cell migration, the positioning of the centrosome and nucleus define a cell's polarity. For a cell migrating on a two-dimensional substrate the centrosome is positioned in front of the nucleus. Under one-dimensional confinement, however, the centrosome is positioned behind the nucleus in 60% of cells. It is known that the centrosome is positioned by CDC42 and dynein for cells moving on a 2D substrate in a wound-healing assay. It is currently unknown, however, if this is also true for cells moving under 1D confinement, where the centrosome position is often reversed. Therefore, centrosome positioning was studied in cells migrating under 1D confinement, which mimics cells migrating through 3D matrices. 3 to 5 μm fibronectin lines were stamped onto a glass substrate and cells with fluorescently labeled nuclei and centrosomes migrated on the lines. Our results show that when a cell changes directions the centrosome position is maintained. That is, when the centrosome is between the nucleus and the cell's trailing edge and the cell changes direction, the centrosome will be translocated across the nucleus to the back of the cell again. A dynein inhibitor did have an influence on centrosome positioning in 1D migration and change of directions.

  6. Whistler choruswaves: Linear theory and nonlinear simulations in dipole geometry

    NASA Astrophysics Data System (ADS)

    Wu, Shuo

    2015-12-01

    Whistler-mode chorus waves have recently drawn tremendous attention as an important mechanism for controlling the energetic electron flux in Earth's radiation belt. This dissertation aims to answer questions about whistler-mode chorus waves, such as "What is the effect of cold plasma density on the linear whistler instability? How do whistler mode chorus waves evolve in a meridional plane? How would chorus waves occur if the magnetosphere is compressed?" First, we derive the real dispersion relation and linear growth rate of whistler mode in mixed hot and cold plasma. We find that there is a peak in the temporal and convective growth rates with respect to cold plasma density. We model the relation between the linear growth rate and various plasma parameters and use this model to explain the observed modulation of chorus intensity by cold plasma density. Second, we simulate the nonlinear growth of whistler-mode chorus waves in a dipole field using a hybrid code. The hybrid code uses the particle-in-cell technique in generalized orthogonal coordinates. A small fraction of electrons is treated as particles with anisotropic temperature that leads to the whistler instability. Other electrons are treated as a cold fluid without mass. The rough validity of our model is confirmed by comparing results from our hybrid code and a full dynamics particle in cell code. Our 1-D simulations along the dipole field line reproduce chorus generation in agreement with observations and past studies. We find that it is easier to simulate temporal frequency variation in a scaled down system with greater magnetic field inhomogeneity. Our 2-D simulations reveal features of chorus propagation in a meridional plane and the effects of background plasma density on that propagation. These are the first 2-D first principles simulations of whistler-mode chorus waves in Earth's dipole field. Our preliminary simulation in a 1-D compressed dipole field is the first attempt to self

  7. A 1-D dusty plasma photonic crystal

    SciTech Connect

    Mitu, M. L.; Ticoş, C. M.; Toader, D.; Banu, N.; Scurtu, A.

    2013-09-21

    It is demonstrated numerically that a 1-D plasma crystal made of micron size cylindrical dust particles can, in principle, work as a photonic crystal for terahertz waves. The dust rods are parallel to each other and arranged in a linear string forming a periodic structure of dielectric-plasma regions. The dispersion equation is found by solving the waves equation with the boundary conditions at the dust-plasma interface and taking into account the dielectric permittivity of the dust material and plasma. The wavelength of the electromagnetic waves is in the range of a few hundred microns, close to the interparticle separation distance. The band gaps of the 1-D plasma crystal are numerically found for different types of dust materials, separation distances between the dust rods and rod diameters. The distance between levitated dust rods forming a string in rf plasma is shown experimentally to vary over a relatively wide range, from 650 μm to about 1350 μm, depending on the rf power fed into the discharge.

  8. Kinetic electron and ion instability of the lunar wake simulated at physical mass ratio

    SciTech Connect

    Haakonsen, Christian Bernt Hutchinson, Ian H. Zhou, Chuteng

    2015-03-15

    The solar wind wake behind the moon is studied with 1D electrostatic particle-in-cell (PIC) simulations using a physical ion to electron mass ratio (unlike prior investigations); the simulations also apply more generally to supersonic flow of dense magnetized plasma past non-magnetic objects. A hybrid electrostatic Boltzmann electron treatment is first used to investigate the ion stability in the absence of kinetic electron effects, showing that the ions are two-stream unstable for downstream wake distances (in lunar radii) greater than about three times the solar wind Mach number. Simulations with PIC electrons are then used to show that kinetic electron effects can lead to disruption of the ion beams at least three times closer to the moon than in the hybrid simulations. This disruption occurs as the result of a novel wake phenomenon: the non-linear growth of electron holes spawned from a narrow dimple in the electron velocity distribution. Most of the holes arising from the dimple are small and quickly leave the wake, approximately following the unperturbed electron phase-space trajectories, but some holes originating near the center of the wake remain and grow large enough to trigger disruption of the ion beams. Non-linear kinetic-electron effects are therefore essential to a comprehensive understanding of the 1D electrostatic stability of such wakes, and possible observational signatures in ARTEMIS data from the lunar wake are discussed.

  9. 1D-VAR Retrieval Using Superchannels

    NASA Technical Reports Server (NTRS)

    Liu, Xu; Zhou, Daniel; Larar, Allen; Smith, William L.; Schluessel, Peter; Mango, Stephen; SaintGermain, Karen

    2008-01-01

    Since modern ultra-spectral remote sensors have thousands of channels, it is difficult to include all of them in a 1D-var retrieval system. We will describe a physical inversion algorithm, which includes all available channels for the atmospheric temperature, moisture, cloud, and surface parameter retrievals. Both the forward model and the inversion algorithm compress the channel radiances into super channels. These super channels are obtained by projecting the radiance spectra onto a set of pre-calculated eigenvectors. The forward model provides both super channel properties and jacobian in EOF space directly. For ultra-spectral sensors such as Infrared Atmospheric Sounding Interferometer (IASI) and the NPOESS Airborne Sounder Testbed Interferometer (NAST), a compression ratio of more than 80 can be achieved, leading to a significant reduction in computations involved in an inversion process. Results will be shown applying the algorithm to real IASI and NAST data.

  10. 75 FR 27411 - Airworthiness Directives; Turbomeca Arriel 1B, 1D, 1D1, and 1S1 Turboshaft Engines

    Federal Register 2010, 2011, 2012, 2013, 2014

    2010-05-17

    ... (that incorporate Turbomeca Modification (mod) TU 148), Arriel 1D, 1D1, and 1S1 turboshaft engines that do not incorporate mod TU 347. That AD also requires initial and repetitive replacements of 2nd stage... incorporate mod TU 148), 1D, 1D1, and 1S1 turboshaft engines that do not incorporate mod TU 347. We...

  11. Morphodynamics and sediment tracers in 1-D (MAST-1D): 1-D sediment transport that includes exchange with an off-channel sediment reservoir

    NASA Astrophysics Data System (ADS)

    Lauer, J. Wesley; Viparelli, Enrica; Piégay, Hervé

    2016-07-01

    Bed material transported in geomorphically active gravel bed rivers often has a local source at nearby eroding banks and ends up sequestered in bars not far downstream. However, most 1-D numerical models for gravel transport assume that gravel originates from and deposits on the channel bed. In this paper, we present a 1-D framework for simulating morphodynamic evolution of bed elevation and size distribution in a gravel-bed river that actively exchanges sediment with its floodplain, which is represented as an off-channel sediment reservoir. The model is based on the idea that sediment enters the channel at eroding banks whose elevation depends on total floodplain sediment storage and on the average elevation of the floodplain relative to the channel bed. Lateral erosion of these banks occurs at a specified rate that can represent either net channel migration or channel widening. Transfer of material out of the channel depends on a typical bar thickness and a specified lateral exchange rate due either to net channel migration or narrowing. The model is implemented using an object oriented framework that allows users to explore relationships between bank supply, bed structure, and lateral change rates. It is applied to a ∼50-km reach of the Ain River, France, that experienced significant reduction in sediment supply due to dam construction during the 20th century. Results are strongly sensitive to lateral exchange rates, showing that in this reach, the supply of sand and gravel at eroding banks and the sequestration of gravel in point bars can have strong influence on overall reach-scale sediment budgets.

  12. Kinetic simulations of magnetized capacitively coupled discharges

    NASA Astrophysics Data System (ADS)

    Trieschmann, Jan; Shihab, Mohammed; Eremin, Denis; Brinkmann, Ralf Peter; Schulze, Julian; Mussenbrock, Thomas

    2012-10-01

    Capacitive high frequency discharges are of crucial importance in the context of plasma etching, deposition and surface modification. As these single or multiple frequency discharges are oftentimes operated at low pressures of less than a few pascal, a high plasma density is commonly achieved with the use of external magnetic fields. In this work kinetic simulations are used to investigate the effect of inhomogeneous external magnetic fields on the discharge dynamics in a strongly nonlocal pressure regime. We found that capacitively coupled discharges can be largely asymmetrized by applying strong magnetic fields in front of a given target electrode. This not only has an effect on the plasma density, but also on the ion energy distribution functions (IEDF) at the electrodes and on the acceleration of fast electrons in the plasma sheath regions. In consequence in the discharge currents a generation of higher harmonics of the driving frequency can be observed. We investigate these scenarios in terms of 1D-3V Particle in Cell simulations.

  13. An implicit δf particle-in-cell method with sub-cycling and orbit averaging for Lorentz ions

    NASA Astrophysics Data System (ADS)

    Sturdevant, Benjamin J.; Parker, Scott E.; Chen, Yang; Hause, Benjamin B.

    2016-07-01

    A second order implicit δf Lorentz ion hybrid model with sub-cycling and orbit averaging has been developed to study low-frequency, quasi-neutral plasmas. Models using the full Lorentz force equations of motion for ions may be useful for verifying gyrokinetic ion simulation models in applications where higher order terms may be important. In the presence of a strong external magnetic field, previous Lorentz ion models are limited to simulating very short time scales due to the small time step required for resolving the ion gyromotion. Here, we use a simplified model for ion Landau damped ion acoustic waves in a uniform magnetic field as a test bed for developing efficient time stepping methods to be used with the Lorentz ion hybrid model. A detailed linear analysis of the model is derived to validate simulations and to examine the significance of ion Bernstein waves in the Lorentz ion model. Linear analysis of a gyrokinetic ion model is also performed, and excellent agreement with the dispersion results from the Lorentz ion model is demonstrated for the ion acoustic wave. The sub-cycling/orbit averaging algorithm is shown to produce accurate finite-Larmor-radius effects using large macro-time steps sizes, and numerical damping of high frequency fluctuations can be achieved by formulating the field model in terms of the perturbed flux density. Furthermore, a CPU-GPU implementation of the sub-cycling/orbit averaging is presented and is shown to achieve a significant speedup over an equivalent serial code.

  14. Blood flow quantification using 1D CFD parameter identification

    NASA Astrophysics Data System (ADS)

    Brosig, Richard; Kowarschik, Markus; Maday, Peter; Katouzian, Amin; Demirci, Stefanie; Navab, Nassir

    2014-03-01

    Patient-specific measurements of cerebral blood flow provide valuable diagnostic information concerning cerebrovascular diseases rather than visually driven qualitative evaluation. In this paper, we present a quantitative method to estimate blood flow parameters with high temporal resolution from digital subtraction angiography (DSA) image sequences. Using a 3D DSA dataset and a 2D+t DSA sequence, the proposed algorithm employs a 1D Computational Fluid Dynamics (CFD) model for estimation of time-dependent flow values along a cerebral vessel, combined with an additional Advection Diffusion Equation (ADE) for contrast agent propagation. The CFD system, followed by the ADE, is solved with a finite volume approximation, which ensures the conservation of mass. Instead of defining a new imaging protocol to obtain relevant data, our cost function optimizes the bolus arrival time (BAT) of the contrast agent in 2D+t DSA sequences. The visual determination of BAT is common clinical practice and can be easily derived from and be compared to values, generated by a 1D-CFD simulation. Using this strategy, we ensure that our proposed method fits best to clinical practice and does not require any changes to the medical work flow. Synthetic experiments show that the recovered flow estimates match the ground truth values with less than 12% error in the mean flow rates.

  15. Study of plasma meniscus and beam halo in negative ion sources using three dimension in real space and three dimension in velocity space particle in cell model

    SciTech Connect

    Nishioka, S. Goto, I.; Hatayama, A.; Miyamoto, K.; Okuda, S.; Fukano, A.

    2014-02-15

    Our previous study by two dimension in real space and three dimension in velocity space-particle in cell model shows that the curvature of the plasma meniscus causes the beam halo in the negative ion sources. The negative ions extracted from the periphery of the meniscus are over-focused in the extractor due to the electrostatic lens effect, and consequently become the beam halo. The purpose of this study is to verify this mechanism with the full 3D model. It is shown that the above mechanism is essentially unchanged even in the 3D model, while the fraction of the beam halo is significantly reduced to 6%. This value reasonably agrees with the experimental result.

  16. Towards the optimization of a gyrokinetic Particle-In-Cell (PIC) code on large-scale hybrid architectures

    NASA Astrophysics Data System (ADS)

    Ohana, N.; Jocksch, A.; Lanti, E.; Tran, T. M.; Brunner, S.; Gheller, C.; Hariri, F.; Villard, L.

    2016-11-01

    With the aim of enabling state-of-the-art gyrokinetic PIC codes to benefit from the performance of recent multithreaded devices, we developed an application from a platform called the “PIC-engine” [1, 2, 3] embedding simplified basic features of the PIC method. The application solves the gyrokinetic equations in a sheared plasma slab using B-spline finite elements up to fourth order to represent the self-consistent electrostatic field. Preliminary studies of the so-called Particle-In-Fourier (PIF) approach, which uses Fourier modes as basis functions in the periodic dimensions of the system instead of the real-space grid, show that this method can be faster than PIC for simulations with a small number of Fourier modes. Similarly to the PIC-engine, multiple levels of parallelism have been implemented using MPI+OpenMP [2] and MPI+OpenACC [1], the latter exploiting the computational power of GPUs without requiring complete code rewriting. It is shown that sorting particles [3] can lead to performance improvement by increasing data locality and vectorizing grid memory access. Weak scalability tests have been successfully run on the GPU-equipped Cray XC30 Piz Daint (at CSCS) up to 4,096 nodes. The reduced time-to-solution will enable more realistic and thus more computationally intensive simulations of turbulent transport in magnetic fusion devices.

  17. Axion string dynamics I: 2+1D

    NASA Astrophysics Data System (ADS)

    Fleury, Leesa M.; Moore, Guy D.

    2016-05-01

    If the axion exists and if the initial axion field value is uncorrelated at causally disconnected points, then it should be possible to predict the efficiency of cosmological axion production, relating the axionic dark matter density to the axion mass. The main obstacle to making this prediction is correctly treating the axion string cores. We develop a new algorithm for treating the axionic string cores correctly in 2+1 dimensions. When the axionic string cores are given their full physical string tension, axion production is about twice as efficient as in previous simulations. We argue that the string network in 2+1 dimensions should behave very differently than in 3+1 dimensions, so this result cannot be simply carried over to the physical case. We outline how to extend our method to 3+1D axion string dynamics.

  18. Axion string dynamics I: 2+1D

    SciTech Connect

    Fleury, Leesa M.; Moore, Guy D.

    2016-05-03

    If the axion exists and if the initial axion field value is uncorrelated at causally disconnected points, then it should be possible to predict the efficiency of cosmological axion production, relating the axionic dark matter density to the axion mass. The main obstacle to making this prediction is correctly treating the axion string cores. We develop a new algorithm for treating the axionic string cores correctly in 2+1 dimensions. When the axionic string cores are given their full physical string tension, axion production is about twice as efficient as in previous simulations. We argue that the string network in 2+1 dimensions should behave very differently than in 3+1 dimensions, so this result cannot be simply carried over to the physical case. We outline how to extend our method to 3+1D axion string dynamics.

  19. FLIP (fluid-implicit-particle): A low-dissipation, particle-in-cell method for fluid flow

    SciTech Connect

    Brackbill, J.U.; Kothe, D.B.; Ruppel, H.M.

    1987-01-01

    Since convective transport is the largest source of computational diffusion, FLIP (fluid-implicit-particle) eliminates convection, and uses instead a Lagrangian formulation. In FLIP, as in PIC, particles represent the fluid: a grid is used only to calculate interactions among particles. FLIP is an adaptation to fluid flows of the implicit moment method for plasma simulation. The particles carry coordinates, momentum, mass and energy; everything necessary to describe the fluid. Using the particle data, Lagrangian moment equations solved on a grid advance the particle variables from time step to time step. An adaptive grid and implicit time differencing extend the method to singular and low-speed flows. Aspects of FLIP's properties are illustrated by calculations of the Rayleigh-Taylor instability, an unstable, subsonic stream, and a supersonic jet. The results demonstrate FLIP's applicability to the many problems where low dissipation is crucial to correct modeling. 21 refs.

  20. 1D-1D Coulomb drag in a 6 Million Mobility Bi-layer Heterostructure

    NASA Astrophysics Data System (ADS)

    Bilodeau, Simon; Laroche, Dominique; Xia, Jian-Sheng; Lilly, Mike; Reno, John; Pfeiffer, Loren; West, Ken; Gervais, Guillaume

    We report Coulomb drag measurements in vertically-coupled quantum wires. The wires are fabricated in GaAs/AlGaAs bilayer heterostructures grown from two different MBE chambers: one at Sandia National Laboratories (1.2M mobility), and the other at Princeton University (6M mobility). The previously observed positive and negative drag signals are seen in both types of devices, demonstrating the robustness of the result. However, attempts to determine the temperature dependence of the drag signal in the 1D regime proved challenging in the higher mobility heterostructure (Princeton), in part because of difficulties in aligning the wires within the same transverse subband configuration. Nevertheless, this work, performed at the Microkelvin laboratory of the University of Florida, is an important proof-of-concept for future investigations of the temperature dependence of the 1D-1D drag signal down to a few mK. Such an experiment could confirm the Luttinger charge density wave interlocking predicted to occur in the wires. Sandia National Laboratories is a multi-program laboratory managed and operated by Sandia Corporation, a wholly owned subsidiary of Lockheed Martin Corporation, for the U.S. Department of Energy's National Nuclear Security Administration under Contract DE-AC04-94AL8500.

  1. Computer simulation of plasma and N-body problems

    NASA Technical Reports Server (NTRS)

    Harries, W. L.; Miller, J. B.

    1975-01-01

    The following FORTRAN language computer codes are presented: (1) efficient two- and three-dimensional central force potential solvers; (2) a three-dimensional simulator of an isolated galaxy which incorporates the potential solver; (3) a two-dimensional particle-in-cell simulator of the Jeans instability in an infinite self-gravitating compressible gas; and (4) a two-dimensional particle-in-cell simulator of a rotating self-gravitating compressible gaseous system of which rectangular coordinate and superior polar coordinate versions were written.

  2. A new general 1-D vadose zone flow solution method

    NASA Astrophysics Data System (ADS)

    Ogden, Fred L.; Lai, Wencong; Steinke, Robert C.; Zhu, Jianting; Talbot, Cary A.; Wilson, John L.

    2015-06-01

    We have developed an alternative to the one-dimensional partial differential equation (PDE) attributed to Richards (1931) that describes unsaturated porous media flow in homogeneous soil layers. Our solution is a set of three ordinary differential equations (ODEs) derived from unsaturated flux and mass conservation principles. We used a hodograph transformation, the Method of Lines, and a finite water-content discretization to produce ODEs that accurately simulate infiltration, falling slugs, and groundwater table dynamic effects on vadose zone fluxes. This formulation, which we refer to as "finite water-content", simulates sharp fronts and is guaranteed to conserve mass using a finite-volume solution. Our ODE solution method is explicitly integrable, does not require iterations and therefore has no convergence limits and is computationally efficient. The method accepts boundary fluxes including arbitrary precipitation, bare soil evaporation, and evapotranspiration. The method can simulate heterogeneous soils using layers. Results are presented in terms of fluxes and water content profiles. Comparing our method against analytical solutions, laboratory data, and the Hydrus-1D solver, we find that predictive performance of our finite water-content ODE method is comparable to or in some cases exceeds that of the solution of Richards' equation, with or without a shallow water table. The presented ODE method is transformative in that it offers accuracy comparable to the Richards (1931) PDE numerical solution, without the numerical complexity, in a form that is robust, continuous, and suitable for use in large watershed and land-atmosphere simulation models, including regional-scale models of coupled climate and hydrology.

  3. Self-Consistent Simulation of Multipactor Discharge at HPM Dielectric Windows

    NASA Astrophysics Data System (ADS)

    Fichtl, Chris; Cartwright, Keith; Verboncoeur, John

    2004-11-01

    Modeling multipactor discharges is important for understanding for understanding window breakdown and parasitic plasma discharges in high power microwave tubes. We are using ICEPIC (Improved Concurrent Electromagnetic Particle-In-Cell) code to study window breakdown by including a Vaughn model for secondary emission, and a Monte-Carlo collision package for studying the formation of plasma from ionization of background gas. We will verify that the secondary model produces the expected behavior by comparing our results with theory and with the OOPIC 2d code. This paper will compare and contrast 1d fully electromagnetic simulations (with full space-charge effects) with 1d theory without space-charge effects. Then we will expand this model to be periodic transverse to the dielectric. Finally we will show a multipactor discharge forming at a waveguide-dielectric window interface. This suite of simulations will explore the effect of the finite electron hopping distance on the discharge. We will analyze the transmitted and reflected power from the discharge and the distribuition of electrons that impact the dielectric surface.

  4. Investigation of Wave Excitation by Conventional and Parametric Antennas in the Ionospheric Plasma Using Three-Dimensional Particle-in-Cell Simulations

    NASA Astrophysics Data System (ADS)

    Main, D. S.

    2015-12-01

    Conventional antennas immersed in a cold, magnetized plasma (CMP) and operating in the very low frequency (VLF) range (e.g. loop and dipole antennas) excite plasma waves that are predominantly electrostatic. For example, loop antennas excited in the frequency range ωLH < ω < ωce (where ωLH and ωce are the lower hybrid and electron cyclotron frequencies) produce electrostatic lower oblique resonance (LOR) waves. Likewise a dipole antenna excited in the frequency range ωci < Ω < ωLH (where ωci is the ion cyclotron frequency) produce electrostatic ion acoustic (IA) type density perturbations. The goal of our research is to increase power radiated into the electromagnetic part of the VLF wave spectrum, specifically into electromagnetic Whistler waves. These waves are generated in a CMP due to a nonlinear parametric coupling of the strong quasi-electrostatic electric fields from the loop antenna and the density perturbations from the dipole antenna. Therefore, a parametric antenna is made by parametrically coupling these two waves. Because EM Whistler waves are effective sources of pitch angle diffusion, one application of a parametric antenna includes radiation belt remediation in Earth's space environment. In this poster we show electric field patterns from the loop and dipole antennas and the EM spectrum excited due to the parametric interaction.

  5. EFDC1D - A ONE DIMENSIONAL HYDRODYNAMIC AND SEDIMENT TRANSPORT MODEL FOR RIVER AND STREAM NETWORKS: MODEL THEORY AND USERS GUIDE

    EPA Science Inventory

    This technical report describes the new one-dimensional (1D) hydrodynamic and sediment transport model EFDC1D. This model that can be applied to stream networks. The model code and two sample data sets are included on the distribution CD. EFDC1D can simulate bi-directional unstea...

  6. 1-D Modeling of Massive Particle Injection (MPI) in Tokamaks

    NASA Astrophysics Data System (ADS)

    Wu, W.; Parks, P. B.; Izzo, V. A.

    2008-11-01

    A 1-D Fast Current Quench (FCQ) model is developed to study current evolution and runaway electron suppression under massive density increase. The model consists of coupled toroidal electric field and energy equations, and it is solved numerically for DIII-D and ITER operating conditions. Simulation results suggest that fast shutdown by D2 liquid jet/pellet injection is in principle achievable for the desired plasma cooling time (˜15 ms for DIII-D and ˜50 ms for ITER) under ˜150x or higher densification. The current density and pressure profile are practically unaltered during the initial phase of jet propagation when dilution cooling dominates. With subsequent radiation cooling, the densified discharge enters the strongly collisional regime where Pfirsch-Schluter thermal diffusion can inhibit current contraction on the magnetic axis. Often the 1/1 kink instability, addressed by Kadomtsev's magnetic reconnection model, can be prevented. Our results are compared with NIMROD simulations in which the plasma is suddenly densified by ˜100x and experiences instantaneous dilution cooling, allowing for use of actual (lower) Lundquist numbers.

  7. Simulation of Magnetic Field Guided Plasma Expansion

    NASA Astrophysics Data System (ADS)

    Ebersohn, Frans; Sheehan, J. P.; Gallimore, Alec; Shebalin, John

    2015-09-01

    Magnetic field guided expansion of a radio-frequency plasma was simulated with a quasi-one-dimensional particle-in-cell code. Two-dimensional effects were included in a one-dimensional particle-in-cell code by varying the cross-sectional area of the one dimensional domain and including forces due to the magnetic field. Acceleration of electrons by the magnetic field forces leads to the formation of potential structures which then accelerate the ions into a beam. Density changes due to the plasma expansion only weakly affect the ion acceleration. Rapidly diverging magnetic fields lead to more rapid acceleration and the electrons cool as they expand.

  8. Performance of the UCAN2 Gyrokinetic Particle In Cell (PIC) Code on Two Massively Parallel Mainframes with Intel ``Sandy Bridge'' Processors

    NASA Astrophysics Data System (ADS)

    Leboeuf, Jean-Noel; Decyk, Viktor; Newman, David; Sanchez, Raul

    2013-10-01

    The massively parallel, 2D domain-decomposed, nonlinear, 3D, toroidal, electrostatic, gyrokinetic, Particle in Cell (PIC), Cartesian geometry UCAN2 code, with particle ions and adiabatic electrons, has been ported to two emerging mainframes. These two computers, one at NERSC in the US built by Cray named Edison and the other at the Barcelona Supercomputer Center (BSC) in Spain built by IBM named MareNostrum III (MNIII) just happen to share the same Intel ``Sandy Bridge'' processors. The successful port of UCAN2 to MNIII which came online first has enabled us to be up and running efficiently in record time on Edison. Overall, the performance of UCAN2 on Edison is superior to that on MNIII, particularly at large numbers of processors (>1024) for the same Intel IFORT compiler. This appears to be due to different MPI modules (OpenMPI on MNIII and MPICH2 on Edison) and different interconnection networks (Infiniband on MNIII and Cray's Aries on Edison) on the two mainframes. Details of these ports and comparative benchmarks are presented. Work supported by OFES, USDOE, under contract no. DE-FG02-04ER54741 with the University of Alaska at Fairbanks.

  9. The structure of nanocomposite 1D cationic conductor crystal@SWNT.

    PubMed

    Kiselev, N A; Kumskov, A S; Zakalyukin, R M; Vasiliev, A L; Chernisheva, M V; Eliseev, A A; Krestinin, A V; Freitag, B; Hutchison, J L

    2012-06-01

    Nanocomposites consisting of one-dimensional (1D) crystals of the cationic conductors CuI, CuBr and AgBr inside single-walled carbon nanotubes, mainly (n, 0), were obtained using the capillary technique. 1D crystal structure models were proposed based on the high resolution transmission electron microscopy performed on a FEI Titan 80-300 at 80 kV with aberration correction. According to the models and image simulations there are two modifications of 1D crystal: hexagonal close-packed bromine (iodine) anion sublattice (growth direction <001>) and 1D crystal cubic structure (growth direction <112>) compressed transversely to the nanotube (D(m) ∼1.33 nm) axis. Tentatively this kind of 1D crystal can be considered as monoclinic. One modification of the anion sublattice reversibly transforms into the other inside the nanotube, probably initiated by electron beam heating. As demonstrated by micrographs, copper or silver cations can occupy octahedral positions or are statistically distributed across two tetrahedral positions. A 1DAgBr@SWNT (18, 0; 19, 0) pseudoperiodic 'lattice distortion' is revealed resulting from convolution of the nanotube wall function image with 1D cubic crystal function image.

  10. 1D-Var assimilation of TMI and SSM/I observations in rainy areas

    NASA Astrophysics Data System (ADS)

    Moreau, E.; Lopez, P.; Bauer, P.

    2003-04-01

    The assimilation of observations related to cloud and precipitation has become a very important issue for most operational weather services including ECMWF. A 1D-Var method was developed by Marécal and Mahfouf (2000) for correcting individual profiles of the model's control variables in order to decrease the discrepancies that often exist between the simulated surface rainfall rates and corresponding retrievals obtained from TMI or SSM/I microwave measurements. Instead of performing the 1D-Var on surface rainfall rates that are derived from multi-channel microwave brightness temperatures (BTs) thanks to various algorithms, the 1D-Var calculations have been applied to the BTs directly. The multiple sensitivities of the BTs to the vertically integrated amounts of rain water and cloud water should provide a stronger constraint on the 1D-Var minimization. Another advantage of this method could result from the better knowledge of the errors on observed BTs than on derived rainfall rates. The potential of applying 1D-Var directly to TMI and SSM/I microwave brightness temperatures has been investigated in this study and its results have been compared with the 1D-Var with derived rainfall rates. Results are presented for a pacific super-typhoon and for a north-atlantic extratropical front. A comparison of the retrieved rain profiles using both methods with rain information deduced from the TRMM precipitation radar (PR) is also presented. Additional direct comparisons with the PR reflectivities will be shown by A. Benedetti (2003). Following the work by Marécal and Mahfouf (2002), indirect "1D-Var + 4D-Var" assimilation experiments will be performed. In this approach, the temperature and humidity increments provided by the 1D-Var are first converted into total column water vapour pseudo-observations that are in turn assimilated in ECMWF's 4D-Var system.

  11. 3-D Simulations of NSTAR Ion Thruster Plasma Interactions

    NASA Technical Reports Server (NTRS)

    Wang, J.; Brophy, J.; Polk, J.; Brinza, D.

    1996-01-01

    Described is a Particle-in-Cell with Monte Carlo Collision code developed to perform detailed three-dimensional ion thruster simulations. To capture the full kinetic behavior of ion thruster plumes, both the electrons and ions are treated as test particles. Simulation results are given of the NSTAR ion thruster under ground test and in space conditions. Numerical results are compared.

  12. Cavitation Influence in 1D Part-load Vortex Models

    NASA Astrophysics Data System (ADS)

    Dörfler, P. K.

    2016-11-01

    Residual swirl in the draft tube of Francis turbines may cause annoying low- frequency pulsation of pressure and power output, in particular during part-load operation. A 1D analytical model for these dynamic phenomena would enable simulation by some conventional method for computing hydraulic transients. The proper structure of such a model has implications for the prediction of prototype behaviour based on laboratory tests. The source of excitation as well as the dynamic transmission behaviour of the draft tube flow may both be described either by lumped or distributed parameters. The distributed version contains more information and, due to limited possibilities of identification, some data must be estimated. The distributed cavitation compliance is an example for this dilemma. In recent publications, the customary assumption of a constant wave speed has produced dubious results. The paper presents a more realistic model for distributed compressibility. The measured influence of the Thoma number is applied with the local cavitation factor. This concept is less sensitive to modelling errors and explains both the Thoma and Froude number influence. The possible effect of the normally unknown non-condensable gas content in the vortex cavity is shortly commented. Its measurement in future tests is recommended. It is also recommended to check the available analytical vortex models for possible dispersion effects.

  13. Brady 1D seismic velocity model ambient noise prelim

    SciTech Connect

    Mellors, Robert J.

    2013-10-25

    Preliminary 1D seismic velocity model derived from ambient noise correlation. 28 Green's functions filtered between 4-10 Hz for Vp, Vs, and Qs were calculated. 1D model estimated for each path. The final model is a median of the individual models. Resolution is best for the top 1 km. Poorly constrained with increasing depth.

  14. Simulation of stimulated Brillouin scattering and stimulated Raman scattering in shock ignition

    NASA Astrophysics Data System (ADS)

    Hao, L.; Li, J.; Liu, W. D.; Yan, R.; Ren, C.

    2016-04-01

    We study stimulated Brillouin scattering (SBS) and stimulated Raman scattering (SRS) in shock ignition by comparing fluid and particle-in-cell (PIC) simulations. Under typical parameters for the OMEGA experiments [Theobald et al., Phys. Plasmas 19, 102706 (2012)], a series of 1D fluid simulations with laser intensities ranging between 2 × 1015 and 2 × 1016 W/cm2 finds that SBS is the dominant instability, which increases significantly with the incident intensity. Strong pump depletion caused by SBS and SRS limits the transmitted intensity at the 0.17nc to be less than 3.5 × 1015 W/cm2. The PIC simulations show similar physics but with higher saturation levels for SBS and SRS convective modes and stronger pump depletion due to higher seed levels for the electromagnetic fields in PIC codes. Plasma flow profiles are found to be important in proper modeling of SBS and limiting its reflectivity in both the fluid and PIC simulations.

  15. Interaction of environmental contaminants with zebrafish organic anion transporting polypeptide, Oatp1d1 (Slco1d1)

    SciTech Connect

    Popovic, Marta; Zaja, Roko; Fent, Karl; Smital, Tvrtko

    2014-10-01

    Polyspecific transporters from the organic anion transporting polypeptide (OATP/Oatp) superfamily mediate the uptake of a wide range of compounds. In zebrafish, Oatp1d1 transports conjugated steroid hormones and cortisol. It is predominantly expressed in the liver, brain and testes. In this study we have characterized the transport of xenobiotics by the zebrafish Oatp1d1 transporter. We developed a novel assay for assessing Oatp1d1 interactors using the fluorescent probe Lucifer yellow and transient transfection in HEK293 cells. Our data showed that numerous environmental contaminants interact with zebrafish Oatp1d1. Oatp1d1 mediated the transport of diclofenac with very high affinity, followed by high affinity towards perfluorooctanesulfonic acid (PFOS), nonylphenol, gemfibrozil and 17α-ethinylestradiol; moderate affinity towards carbaryl, diazinon and caffeine; and low affinity towards metolachlor. Importantly, many environmental chemicals acted as strong inhibitors of Oatp1d1. A strong inhibition of Oatp1d1 transport activity was found by perfluorooctanoic acid (PFOA), chlorpyrifos-methyl, estrone (E1) and 17β-estradiol (E2), followed by moderate to low inhibition by diethyl phthalate, bisphenol A, 7-acetyl-1,1,3,4,4,6-hexamethyl-1,2,3,4 tetrahydronapthalene and clofibrate. In this study we identified Oatp1d1 as a first Solute Carrier (SLC) transporter involved in the transport of a wide range of xenobiotics in fish. Considering that Oatps in zebrafish have not been characterized before, our work on zebrafish Oatp1d1 offers important new insights on the understanding of uptake processes of environmental contaminants, and contributes to the better characterization of zebrafish as a model species. - Highlights: • We optimized a novel assay for determination of Oatp1d1 interactors • Oatp1d1 is the first SLC characterized fish xenobiotic transporter • PFOS, nonylphenol, diclofenac, EE2, caffeine are high affinity Oatp1d1substrates • PFOA, chlorpyrifos

  16. D1/D5 dopamine receptors modulate spatial memory formation.

    PubMed

    da Silva, Weber C N; Köhler, Cristiano C; Radiske, Andressa; Cammarota, Martín

    2012-02-01

    We investigated the effect of the intra-CA1 administration of the D1/D5 receptor antagonist SCH23390 and the D1/D5 receptor agonist SKF38393 on spatial memory in the water maze. When given immediately, but not 3h after training, SCH23390 hindered long-term spatial memory formation without affecting non-spatial memory or the normal functionality of the hippocampus. On the contrary, post-training infusion of SKF38393 enhanced retention and facilitated the spontaneous recovery of the original spatial preference after reversal learning. Our findings demonstrate that hippocampal D1/D5 receptors play an essential role in spatial memory processing.

  17. Accuracy of 1D microvascular flow models in the limit of low Reynolds numbers.

    PubMed

    Pindera, Maciej Z; Ding, Hui; Athavale, Mahesh M; Chen, Zhijian

    2009-05-01

    We describe results of numerical simulations of steady flows in tubes with branch bifurcations using fully 3D and reduced 1D geometries. The intent is to delineate the range of validity of reduced models used for simulations of flows in microcapillary networks, as a function of the flow Reynolds number Re. Results from model problems indicate that for Re less than 1 and possibly as high as 10, vasculatures may be represented by strictly 1D Poiseuille flow geometries with flow variation in the axial dimensions only. In that range flow rate predictions in the different branches generated by 1D and 3D models differ by a constant factor, independent of Re. When the cross-sectional areas of the branches are constant these differences are generally small and appear to stem from an uncertainty of how the individual branch lengths are defined. This uncertainty can be accounted for by a simple geometrical correction. For non-constant cross-sections the differences can be much more significant. If additional corrections for the presence of branch junctions and flow area variations are not taken into account in 1D models of complex vasculatures, the resultant flow predictions should be interpreted with caution.

  18. Severe Hypertriglyceridemia in Glut1D on Ketogenic Diet.

    PubMed

    Klepper, Joerg; Leiendecker, Baerbel; Heussinger, Nicole; Lausch, Ekkehart; Bosch, Friedrich

    2016-04-01

    High-fat ketogenic diets are the only treatment available for Glut1 deficiency (Glut1D). Here, we describe an 8-year-old girl with classical Glut1D responsive to a 3:1 ketogenic diet and ethosuximide. After 3 years on the diet a gradual increase of blood lipids was followed by rapid, severe asymptomatic hypertriglyceridemia (1,910 mg/dL). Serum lipid apheresis was required to determine liver, renal, and pancreatic function. A combination of medium chain triglyceride-oil and a reduction of the ketogenic diet to 1:1 ratio normalized triglyceride levels within days but triggered severe myoclonic seizures requiring comedication with sultiam. Severe hypertriglyceridemia in children with Glut1D on ketogenic diets may be underdiagnosed and harmful. In contrast to congenital hypertriglyceridemias, children with Glut1D may be treated effectively by dietary adjustments alone.

  19. TBC1D24 genotype–phenotype correlation

    PubMed Central

    Balestrini, Simona; Milh, Mathieu; Castiglioni, Claudia; Lüthy, Kevin; Finelli, Mattea J.; Verstreken, Patrik; Cardon, Aaron; Stražišar, Barbara Gnidovec; Holder, J. Lloyd; Lesca, Gaetan; Mancardi, Maria M.; Poulat, Anne L.; Repetto, Gabriela M.; Banka, Siddharth; Bilo, Leonilda; Birkeland, Laura E.; Bosch, Friedrich; Brockmann, Knut; Cross, J. Helen; Doummar, Diane; Félix, Temis M.; Giuliano, Fabienne; Hori, Mutsuki; Hüning, Irina; Kayserili, Hulia; Kini, Usha; Lees, Melissa M.; Meenakshi, Girish; Mewasingh, Leena; Pagnamenta, Alistair T.; Peluso, Silvio; Mey, Antje; Rice, Gregory M.; Rosenfeld, Jill A.; Taylor, Jenny C.; Troester, Matthew M.; Stanley, Christine M.; Ville, Dorothee; Walkiewicz, Magdalena; Falace, Antonio; Fassio, Anna; Lemke, Johannes R.; Biskup, Saskia; Tardif, Jessica; Ajeawung, Norbert F.; Tolun, Aslihan; Corbett, Mark; Gecz, Jozef; Afawi, Zaid; Howell, Katherine B.; Oliver, Karen L.; Berkovic, Samuel F.; Scheffer, Ingrid E.; de Falco, Fabrizio A.; Oliver, Peter L.; Striano, Pasquale; Zara, Federico

    2016-01-01

    Objective: To evaluate the phenotypic spectrum associated with mutations in TBC1D24. Methods: We acquired new clinical, EEG, and neuroimaging data of 11 previously unreported and 37 published patients. TBC1D24 mutations, identified through various sequencing methods, can be found online (http://lovd.nl/TBC1D24). Results: Forty-eight patients were included (28 men, 20 women, average age 21 years) from 30 independent families. Eighteen patients (38%) had myoclonic epilepsies. The other patients carried diagnoses of focal (25%), multifocal (2%), generalized (4%), and unclassified epilepsy (6%), and early-onset epileptic encephalopathy (25%). Most patients had drug-resistant epilepsy. We detail EEG, neuroimaging, developmental, and cognitive features, treatment responsiveness, and physical examination. In silico evaluation revealed 7 different highly conserved motifs, with the most common pathogenic mutation located in the first. Neuronal outgrowth assays showed that some TBC1D24 mutations, associated with the most severe TBC1D24-associated disorders, are not necessarily the most disruptive to this gene function. Conclusions: TBC1D24-related epilepsy syndromes show marked phenotypic pleiotropy, with multisystem involvement and severity spectrum ranging from isolated deafness (not studied here), benign myoclonic epilepsy restricted to childhood with complete seizure control and normal intellect, to early-onset epileptic encephalopathy with severe developmental delay and early death. There is no distinct correlation with mutation type or location yet, but patterns are emerging. Given the phenotypic breadth observed, TBC1D24 mutation screening is indicated in a wide variety of epilepsies. A TBC1D24 consortium was formed to develop further research on this gene and its associated phenotypes. PMID:27281533

  20. One, Two, and Three Dimensional Simulations of Laboratory Beam-Injection Experiments

    NASA Astrophysics Data System (ADS)

    Goldman, M. V.; Newman, D. L.; Oppenheim, M. M.; Wong, A. Y.; Cheung, P. Y.

    2000-10-01

    We present the results of three-dimensional fully kinetic simulations of UCLA laboratory experiments,(A. Y. Wong and P. Y. Cheung, Phys. Rev. Lett.), 52, 1222 (1984) which were the first experiments to show Langmuir-wave collapse in a beam-driven plasma. Our massively-parallel particle-in-cell (PIC) simulations model the continuous injection of a fast (v_b=20v_e), cold (Δ vb = Δ v_e), and weak (n_b/n_0=0.005) beam, which is comparable to that used in the laboratory experiments. By comparing the results of 1-D, 2-D, and 3-D simulations with one another and with laboratory measurements, we address the role of dimensionality on key phases of the evolution of beam-driven Langmuir turbulence. Of particular interest are the localization of intense Langmuir wave packets and the subsequent deepening of quasineutral density depressions due to the hydrodynamic response of ions to the ponderomotive force of the localized Langmuir waves. A variety of visualization tools will be employed in the analysis of the three-dimensional turbulence.

  1. Computer simulation of astrophysical plasmas

    NASA Technical Reports Server (NTRS)

    Max, Claire E.

    1991-01-01

    The role of sophisticated numerical models and simulations in the field of plasma astrophysics is discussed. The need for an iteration between microphysics and macrophysics in order for astrophysical plasma physics to produce quantitative results that can be related to astronomical data is stressed. A discussion on computational requirements for simulations of astrophysical plasmas contrasts microscopic plasma simulations with macroscopic system models. An overview of particle-in-cell simulations (PICS) is given and two examples of PICS of astrophysical plasma are discussed including particle acceleration by collisionless shocks in relativistic plasmas and magnetic field reconnection in astrophysical plasmas.

  2. 1D Scaling with Ablation for K-Shell Radiation from Stainless Steel Wire Arrays

    SciTech Connect

    Giuliani, J. L.; Thornhill, J. W.; Dasgupta, A.; Davis, J.; Clark, R. W.; Jones, B.; Cuneo, M.; Coverdale, C. A.; Deeney, C.

    2009-01-21

    A 1D Lagrangian magnetohydrodynamic z-pinch simulation code is extended to include wire ablation. The plasma transport coefficients are calibrated to reproduce the K-shell yields measured on the Z generator for three stainless steel arrays of diameter 55 mm and masses ranging from 1.8 to 2.7 mg. The resulting 1D scaling model is applied to a larger SS array (65 mm and 2.5 mg) on the refurbished Z machine. Simulation results predict a maximum K-shell yield of 77 kJ for an 82 kV charging voltage. This maximum drops to 42 kJ at 75 kV charging. Neglecting the ablation precursor leads to a {approx}10% change in the calculated yield.

  3. Rab28 is a TBC1D1/TBC1D4 substrate involved in GLUT4 trafficking.

    PubMed

    Zhou, Zhou; Menzel, Franziska; Benninghoff, Tim; Chadt, Alexandra; Du, Chen; Holman, Geoffrey D; Al-Hasani, Hadi

    2017-01-01

    The Rab-GTPase-activating proteins (GAPs) TBC1D1 and TBC1D4 play important roles in the insulin-stimulated translocation of the glucose transporter GLUT4 from intracellular vesicles to the plasma membrane in muscle cells and adipocytes. We identified Rab28 as a substrate for the GAP domains of both TBC1D1 and TBC1D4 in vitro. Rab28 is expressed in adipose cells and skeletal muscle, and its GTP-binding state is acutely regulated by insulin. We found that in intact isolated mouse skeletal muscle, siRNA-mediated knockdown of Rab28 decreases basal glucose uptake. Conversely, in primary rat adipose cells, overexpression of Rab28-Q72L, a constitutively active mutant, increases basal cell surface levels of an epitope-tagged HA-GLUT4. Our results indicate that Rab28 is a novel GTPase involved in the intracellular retention of GLUT4 in insulin target cells.

  4. A versatile compact model for ballistic 1D transistor: GNRFET and CNTFET comparison

    NASA Astrophysics Data System (ADS)

    Frégonèse, Sébastien; Maneux, Cristell; Zimmer, Thomas

    2010-11-01

    This paper presents a versatile compact model dedicated to 1D transistors in order to predict the ultimate performances of nano-device-based circuits. We have developed a thermionic charge model based on the non-parabolic-energy-dispersion-relation NPEDR. The model is valid for both CNTFET and GNRFET. Model results are compared with GNRFET NEGF simulations. Then, GNRFET and CNTFET performances are analysed through two circuit demonstrators such as a ring oscillator circuit and 6T RAM.

  5. Line shape of the non-thermal 6300 A O/1D/ emission

    NASA Technical Reports Server (NTRS)

    Schmitt, G. A.; Abreu, V. J.; Hays, P. B.

    1982-01-01

    The two-population model of Schmitt, Abreu and Hays (1981) is used to calculate the line shape of the atomic oxygen metastable state, nonthermal O(1D) 6300 A emission, in order to simulate observations made from a space platform at different zenith angles and altitudes. The Addition theorem, for spherical harmonics of a Legendre polynomial expansion of the nonthermal population distribution function, is used to obtain nonthermal line shapes observed at zenith angles other than the local vertical one.

  6. Emergent 1d Ising Behavior in AN Elementary Cellular Automaton Model

    NASA Astrophysics Data System (ADS)

    Kassebaum, Paul G.; Iannacchione, Germano S.

    The fundamental nature of an evolving one-dimensional (1D) Ising model is investigated with an elementary cellular automaton (CA) simulation. The emergent CA simulation employs an ensemble of cells in one spatial dimension, each cell capable of two microstates interacting with simple nearest-neighbor rules and incorporating an external field. The behavior of the CA model provides insight into the dynamics of coupled two-state systems not expressible by exact analytical solutions. For instance, state progression graphs show the causal dynamics of a system through time in relation to the system's entropy. Unique graphical analysis techniques are introduced through difference patterns, diffusion patterns, and state progression graphs of the 1D ensemble visualizing the evolution. All analyses are consistent with the known behavior of the 1D Ising system. The CA simulation and new pattern recognition techniques are scalable (in both dimension, complexity, and size) and have many potential applications such as complex design of materials, control of agent systems, and evolutionary mechanism design.

  7. Polar discontinuities and 1D interfaces in monolayered materials

    NASA Astrophysics Data System (ADS)

    Martinez-Gordillo, Rafael; Pruneda, Miguel

    2015-12-01

    Interfaces are the birthplace of a multitude of fascinating discoveries in fundamental science, and have enabled modern electronic devices, from transistors, to lasers, capacitors or solar cells. These interfaces between bulk materials are always bi-dimensional (2D) 'surfaces'. However the advent of graphene and other 2D crystals opened up a world of possibilities, as in this case the interfaces become one-dimensional (1D) lines. Although the properties of 1D nanoribbons have been extensively discussed in the last few years, 1D interfaces within infinite 2D systems had remained mostly unexplored until very recently. These include grain boundaries in polycrystalline samples, or interfaces in hybrid 2D sheets composed by segregated domains of different materials (as for example graphene/BN hybrids, or chemically different transition metal dichalcogenides). As for their 2D counterparts, some of these 1D interfaces exhibit polar characteristics, and can give rise to fascinating new physical properties. Here, recent experimental discoveries and theoretical predictions on the polar discontinuities that arise at these 1D interfaces will be reviewed, and the perspectives of this new research topic, discussed.

  8. Ion-sensing properties of 1D vanadium pentoxide nanostructures

    PubMed Central

    2012-01-01

    The application of one-dimensional (1D) V2O5·nH2O nanostructures as pH sensing material was evaluated. 1D V2O5·nH2O nanostructures were obtained by a hydrothermal method with systematic control of morphology forming different nanostructures: nanoribbons, nanowires and nanorods. Deposited onto Au-covered substrates, 1D V2O5·nH2O nanostructures were employed as gate material in pH sensors based on separative extended gate FET as an alternative to provide FET isolation from the chemical environment. 1D V2O5·nH2O nanostructures showed pH sensitivity around the expected theoretical value. Due to high pH sensing properties, flexibility and low cost, further applications of 1D V2O5·nH2O nanostructures comprise enzyme FET-based biosensors using immobilized enzymes. PMID:22709724

  9. Pitch-based pattern splitting for 1D layout

    NASA Astrophysics Data System (ADS)

    Nakayama, Ryo; Ishii, Hiroyuki; Mikami, Koji; Tsujita, Koichiro; Yaegashi, Hidetami; Oyama, Kenichi; Smayling, Michael C.; Axelrad, Valery

    2015-07-01

    The pattern splitting algorithm for 1D Gridded-Design-Rules layout (1D layout) for sub-10 nm node logic devices is shown. It is performed with integer linear programming (ILP) based on the conflict graph created from a grid map for each designated pitch. The relation between the number of times for patterning and the minimum pitch is shown systematically with a sample pattern of contact layer for each node. From the result, the number of times for patterning for 1D layout is fewer than that for conventional 2D layout. Moreover, an experimental result including SMO and total integrated process with hole repair technique is presented with the sample pattern of contact layer whose pattern density is relatively high among critical layers (fin, gate, local interconnect, contact, and metal).

  10. Flexible Photodetectors Based on 1D Inorganic Nanostructures

    PubMed Central

    Lou, Zheng

    2015-01-01

    Flexible photodetectors with excellent flexibility, high mechanical stability and good detectivity, have attracted great research interest in recent years. 1D inorganic nanostructures provide a number of opportunities and capabilities for use in flexible photodetectors as they have unique geometry, good transparency, outstanding mechanical flexibility, and excellent electronic/optoelectronic properties. This article offers a comprehensive review of several types of flexible photodetectors based on 1D nanostructures from the past ten years, including flexible ultraviolet, visible, and infrared photodetectors. High‐performance organic‐inorganic hybrid photodetectors, as well as devices with 1D nanowire (NW) arrays, are also reviewed. Finally, new concepts of flexible photodetectors including piezophototronic, stretchable and self‐powered photodetectors are examined to showcase the future research in this exciting field. PMID:27774404

  11. PC-1D installation manual and user's guide

    SciTech Connect

    Basore, P.A.

    1991-05-01

    PC-1D is a software package for personal computers that uses finite-element analysis to solve the fully-coupled two-carrier semiconductor transport equations in one dimension. This program is particularly useful for analyzing the performance of optoelectronic devices such as solar cells, but can be applied to any bipolar device whose carrier flows are primarily one-dimensional. This User's Guide provides the information necessary to install PC-1D, define a problem for solution, solve the problem, and examine the results. Example problems are presented which illustrate these steps. The physical models and numerical methods utilized are presented in detail. This document supports version 3.1 of PC-1D, which incorporates faster numerical algorithms with better convergence properties than previous versions of the program. 51 refs., 17 figs., 5 tabs.

  12. Multiscale Modeling Techniques for Plasma: 1D Scaling Results and Application to Magnetic Reconnection

    NASA Astrophysics Data System (ADS)

    Shay, Michael; Drake, J.

    2005-10-01

    We examine a novel simulation scheme called ``equation free projective integration'' which has the potential to allow global simulations which still include microscale physics, a necessary ingredient in order to model multiscale problems. Such codes could be used to examine the global effects of reconnection and turbulence in tokamaks, the Earth's magnetosphere, and the solar corona. Using this method to simulate the propagation and steepening of a 1D ion acoustic wave, we have already achieved excellent agreement between full particle codes and equation free with a factor of 20 speed-up. In this method of simulation, the global plasma variables stepped forward in time are not time-integrated directly using dynamical differential equations, hence the name ``equation free.'' Instead, these variables are represented on a microgrid using a kinetic simulation. This microsimulation is integrated forward long enough to determine the time derivatives of the global plasma variables, which are then used to integrate forward the global variables with much larger timesteps. Results will be presented of the successful application of equation free to 1-D ion acoustic wave steepening with a PIC code serving as the underlying kinetic model. Initial results of this technique applied to magnetic reconnection will also be discussed.

  13. Numerical simulation of cathode plasma dynamics in magnetically insulated vacuum transmission lines

    SciTech Connect

    Thoma, C.; Genoni, T. C.; Welch, D. R.; Rose, D. V.; Clark, R. E.; Miller, C. L.; Stygar, W. A.; Kiefer, M. L.

    2015-03-15

    A novel algorithm for the simulation of cathode plasmas in particle-in-cell codes is described and applied to investigate cathode plasma evolution in magnetically insulated transmission lines (MITLs). The MITL electron sheath is modeled by a fully kinetic electron species. Electron and ion macroparticles, both modeled as fluid species, form a dense plasma which is initially localized at the cathode surface. Energetic plasma electron particles can be converted to kinetic electrons to resupply the electron flux at the plasma edge (the “effective” cathode). Using this model, we compare results for the time evolution of the cathode plasma and MITL electron flow with a simplified (isothermal) diffusion model. Simulations in 1D show a slow diffusive expansion of the plasma from the cathode surface. But in multiple dimensions, the plasma can expand much more rapidly due to anomalous diffusion caused by an instability due to the strong coupling of a transverse magnetic mode in the electron sheath with the expanding resistive plasma layer.

  14. Toward a consistent use of overshooting parametrizations in 1D stellar evolution codes

    NASA Astrophysics Data System (ADS)

    Viallet, M.; Meakin, C.; Prat, V.; Arnett, D.

    2015-08-01

    Several parametrizations for overshooting in 1D stellar evolution calculations coexist in the literature. These parametrizations are used somewhat arbitrarily in stellar evolution codes, based on what works best for a given problem or even for the historical reasons related to the development of each code. We point out that these different parametrizations correspond to different physical regimes of overshooting, depending on whether the effects of radiation are dominant, marginal, or negligible. Our analysis is based on previously published theoretical results, as well as on multidimensional hydrodynamical simulations of stellar convection where the interaction between the convective region and a stably stratified region is observed. Although the underlying hydrodynamical processes are the same, the outcome of the overshooting process is profoundly affected by radiative effects. Using a simple picture of the scales involved in the overshooting process, we show how three regimes are obtained, depending on the importance of radiative effects. These three regimes correspond to the different behaviors observed in hydrodynamical simulations so far and to the three types of parametrizations used in 1D codes. We suggest that the existing parametrizations for overshooting should coexist in 1D stellar evolution codes and should be applied consistently at convective boundaries depending on the local physical conditions.

  15. Non-cooperative Brownian donkeys: A solvable 1D model

    NASA Astrophysics Data System (ADS)

    Jiménez de Cisneros, B.; Reimann, P.; Parrondo, J. M. R.

    2003-12-01

    A paradigmatic 1D model for Brownian motion in a spatially symmetric, periodic system is tackled analytically. Upon application of an external static force F the system's response is an average current which is positive for F < 0 and negative for F > 0 (absolute negative mobility). Under suitable conditions, the system approaches 100% efficiency when working against the external force F.

  16. Crystal orbital studies on the 1D silic-diyne nanoribbons and nanotubes

    NASA Astrophysics Data System (ADS)

    Zhu, Ying; Bai, Hongcun; Huang, Yuanhe

    2016-02-01

    This work presents crystal orbital studies on novel one-dimensional (1D) nanoscale materials derived from a Si-diyne sheet, based on the density functional theory. The two-dimensional (2D) Si-diyne layer is observed to be carbo-merized silicene, with a similar structure to graphdiyne. The 2D Si-diyne and its 1D ribbons and tubes, of different size and chirality, have been addressed systematically. The low dimensional Si-diyne materials studied exhibit relatively high stability, according to phonon-frequency calculations and molecular dynamics simulations. With comparable diameters, the Si-diyne tubes have lower strain energies than silicene and silicon carbide nanotubes. The Si-diyne layer and its 1D derivatives are all semiconductors, regardless of the size and chirality of the strips and tubes. In addition, the band gaps of the 1D Si-diyne nanoribbons and nanotubes with different chirality, always monotonically decrease as their sizes increases. A quantitative relationship between the band gap and the size of the ribbons and tubes was obtained. The mobility of charge carriers for the 1D Si-diyne structures was also investigated. It was found that both hole and electron mobility of the ribbons and tubes exhibit linear increase with increasing size. The electrons have greater mobility than the holes for each strip and tube. In addition, the mechanical properties of the Si-diyne nanostructures were also investigated by calculation of the Young’s modulus and the Poisson’s ratio.

  17. Verification and comparison of four numerical schemes for a 1D viscoelastic blood flow model.

    PubMed

    Wang, Xiaofei; Fullana, Jose-Maria; Lagrée, Pierre-Yves

    2015-01-01

    A reliable and fast numerical scheme is crucial for the 1D simulation of blood flow in compliant vessels. In this paper, a 1D blood flow model is incorporated with a Kelvin-Voigt viscoelastic arterial wall. This leads to a nonlinear hyperbolic-parabolic system, which is then solved with four numerical schemes, namely: MacCormack, Taylor-Galerkin, monotonic upwind scheme for conservation law and local discontinuous Galerkin. The numerical schemes are tested on a single vessel, a simple bifurcation and a network with 55 arteries. The numerical solutions are checked favorably against analytical, semi-analytical solutions or clinical observations. Among the numerical schemes, comparisons are made in four important aspects: accuracy, ability to capture shock-like phenomena, computational speed and implementation complexity. The suitable conditions for the application of each scheme are discussed.

  18. A 1D (radial) Plasma Jet Propagation Study for the Plasma Liner Experiment (PLX)

    NASA Astrophysics Data System (ADS)

    Thompson, J. R.; Bogatu, I. N.; Galkin, S. A.; Kim, J. S.; Welch, D. R.; Thoma, C.; Golovkin, I.; Macfarlane, J. J.; Case, A.; Messer, S. J.; Witherspoon, F. D.; Cassibry, J. T.; Awe, T. J.; Hsu, S. C.

    2011-10-01

    The Plasma Liner Experiment will explore the formation of imploding spherical ``plasma liners'' that reach peak pressures of 0.1 Mbar upon stagnation. The liners will be formed through the merging of dense, high velocity plasma jets (n ~1017 cm-3, T ~3 eV, v ~50 km/s) in a spherically convergent geometry. The focus of this 1D (radial) study is argon plasma jet evolution during propagation from the rail gun source to the jet merging radius. The study utilizes the Large Scale Plasma (LSP) PIC code with atomic physics included through the use of a non-Local Thermal Equilibrium (NLTE) Equation of State (EOS) table. We will present scenarios for expected 1D (radial) plasma jet evolution, from upon exiting the PLX rail gun to reaching the jet merging radius. The importance of radiation cooling early in the simulation is highlighted. Work supported by US DOE grant DE-FG02-05ER54835.

  19. Rogue-wave bullets in a composite (2+1)D nonlinear medium.

    PubMed

    Chen, Shihua; Soto-Crespo, Jose M; Baronio, Fabio; Grelu, Philippe; Mihalache, Dumitru

    2016-07-11

    We show that nonlinear wave packets localized in two dimensions with characteristic rogue wave profiles can propagate in a third dimension with significant stability. This unique behavior makes these waves analogous to light bullets, with the additional feature that they propagate on a finite background. Bulletlike rogue-wave singlet and triplet are derived analytically from a composite (2+1)D nonlinear wave equation. The latter can be interpreted as the combination of two integrable (1+1)D models expressed in different dimensions, namely, the Hirota equation and the complex modified Korteweg-de Vries equation. Numerical simulations confirm that the generation of rogue-wave bullets can be observed in the presence of spontaneous modulation instability activated by quantum noise.

  20. Lacunarity analysis of raster datasets and 1D, 2D, and 3D point patterns

    NASA Astrophysics Data System (ADS)

    Dong, Pinliang

    2009-10-01

    Spatial scale plays an important role in many fields. As a scale-dependent measure for spatial heterogeneity, lacunarity describes the distribution of gaps within a set at multiple scales. In Earth science, environmental science, and ecology, lacunarity has been increasingly used for multiscale modeling of spatial patterns. This paper presents the development and implementation of a geographic information system (GIS) software extension for lacunarity analysis of raster datasets and 1D, 2D, and 3D point patterns. Depending on the application requirement, lacunarity analysis can be performed in two modes: global mode or local mode. The extension works for: (1) binary (1-bit) and grey-scale datasets in any raster format supported by ArcGIS and (2) 1D, 2D, and 3D point datasets as shapefiles or geodatabase feature classes. For more effective measurement of lacunarity for different patterns or processes in raster datasets, the extension allows users to define an area of interest (AOI) in four different ways, including using a polygon in an existing feature layer. Additionally, directionality can be taken into account when grey-scale datasets are used for local lacunarity analysis. The methodology and graphical user interface (GUI) are described. The application of the extension is demonstrated using both simulated and real datasets, including Brodatz texture images, a Spaceborne Imaging Radar (SIR-C) image, simulated 1D points on a drainage network, and 3D random and clustered point patterns. The options of lacunarity analysis and the effects of polyline arrangement on lacunarity of 1D points are also discussed. Results from sample data suggest that the lacunarity analysis extension can be used for efficient modeling of spatial patterns at multiple scales.