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Sample records for 105-r disassembly basin

  1. GROUT TEMPERATURE MEASUREMENTS IN 105-R DISASSEMBLY BASIN D AND E CANAL

    SciTech Connect

    Fogle, R.; Collins, M.; Guerrero, H.

    2010-06-03

    The 105-R Reactor Disassembly Basin Grout Placement Strategy Report (SRNL-TR-2009-00157) identifies various portions of the facility that will undergo an in-situ decommissioning process. The estimated residual radioactive contamination in the 105-R facility is shown in Figure 1. Cementitious grout formulations developed by SRNL are being used to immobilize and isolate the radioactive contamination in existing below grade portions of the 105-R building as shown by the gray-hatched area in Figure 2. A Zero Bleed flowable fill was formulated for both dry placement and for underwater placement. The first major area in the 105-R Disassembly Basin to undergo the grouting process was the D&E Canal and an underlying void space known as the Chase. Grout temperature data was needed to ensure that the grout mix design was on the correct grout curing trajectory to meet the material compressive strength requirement of 50 pounds per square inch. Initial grout temperature measurements were needed to confirm and optimize grout mix design fresh property characteristics; i.e. material strength, and set time. Grout curing temperature is an integrating fresh property characteristic that is used to estimate cementitious material strength in accordance with the Standard Practice for Estimating Concrete Strength by the Maturity Method, ASTM C 1074. The Maturity Method is used in the construction industry to estimate in-place strength of concrete to allow the start of critical construction activities; e.g. formwork removal, removal of cold weather protection, opening of roadways to traffic, etc. Applying this methodology provides an expeditious means to estimate in-place grout strength based on compressive strength laboratory results. The Maturity Method results define the relationship between strength-time and age-time that may be utilized in the field for estimating strength after a given time of placement. Maturation curves were developed under the 105-R Reactor Disassembly Basin

  2. SAVANNAH RIVER SITE R REACTOR DISASSEMBLY BASIN IN SITU DECOMMISSIONING

    SciTech Connect

    Langton, C.; Blankenship, J.; Griffin, W.; Serrato, M.

    2009-12-03

    The US DOE concept for facility in-situ decommissioning (ISD) is to physically stabilize and isolate in tact, structurally sound facilities that are no longer needed for their original purpose of, i.e., generating (reactor facilities), processing(isotope separation facilities) or storing radioactive materials. The 105-R Disassembly Basin is the first SRS reactor facility to undergo the in-situ decommissioning (ISD) process. This ISD process complies with the105-R Disassembly Basin project strategy as outlined in the Engineering Evaluation/Cost Analysis for the Grouting of the R-Reactor Disassembly Basin at the Savannah River Site and includes: (1) Managing residual water by solidification in-place or evaporation at another facility; (2) Filling the below grade portion of the basin with cementitious materials to physically stabilize the basin and prevent collapse of the final cap - Sludge and debris in the bottom few feet of the basin will be encapsulated between the basin floor and overlying fill material to isolate if from the environment; (3) Demolishing the above grade portion of the structure and relocating the resulting debris to another location or disposing of the debris in-place; and (4) Capping the basin area with a concrete slab which is part of an engineered cap to prevent inadvertent intrusion. The estimated total grout volume to fill the 105-R Reactor Disassembly Basin is 24,424 cubic meters or 31,945 cubic yards. Portland cement-based structural fill materials were design and tested for the reactor ISD project and a placement strategy for stabilizing the basin was developed. Based on structural engineering analyses and work flow considerations, the recommended maximum lift height is 5 feet with 24 hours between lifts. Pertinent data and information related to the SRS 105-R-Reactor Disassembly Basin in-situ decommissioning include: regulatory documentation, residual water management, area preparation activities, technology needs, fill material designs

  3. SAVANNAH RIVER SITE R-REACTOR DISASSEMBLY BASIN IN-SITU DECOMMISSIONING -10499

    SciTech Connect

    Langton, C.; Serrato, M.; Blankenship, J.; Griffin, W.

    2010-01-04

    The US DOE concept for facility in-situ decommissioning (ISD) is to physically stabilize and isolate intact, structurally sound facilities that are no longer needed for their original purpose, i.e., generating (reactor facilities), processing(isotope separation facilities) or storing radioactive materials. The 105-R Disassembly Basin is the first SRS reactor facility to undergo the in-situ decommissioning (ISD) process. This ISD process complies with the 105-R Disassembly Basin project strategy as outlined in the Engineering Evaluation/Cost Analysis for the Grouting of the R-Reactor Disassembly Basin at the Savannah River Site and includes: (1) Managing residual water by solidification in-place or evaporation at another facility; (2) Filling the below grade portion of the basin with cementitious materials to physically stabilize the basin and prevent collapse of the final cap - Sludge and debris in the bottom few feet of the basin will be encapsulated between the basin floor and overlying fill material to isolate it from the environment; (3) Demolishing the above grade portion of the structure and relocating the resulting debris to another location or disposing of the debris in-place; and (4) Capping the basin area with a concrete slab which is part of an engineered cap to prevent inadvertent intrusion. The estimated total grout volume to fill the 105-R Reactor Disassembly Basin is 24,384 cubic meters or 31,894 cubic yards. Portland cement-based structural fill materials were designed and tested for the reactor ISD project, and a placement strategy for stabilizing the basin was developed. Based on structural engineering analyses and material flow considerations, maximum lift heights and differential height requirements were determined. Pertinent data and information related to the SRS 105-R Reactor Disassembly Basin in-situ decommissioning include: regulatory documentation, residual water management, area preparation activities, technology needs, fill material

  4. Deactivation of the P, C, and R Reactor Disassembly Basins at the SRS

    SciTech Connect

    Pickett, J.B.

    2000-12-06

    The Facilities Disposition Division (FDD) at the Savannah River Site is engaged in planning the deactivation/closure of three of the site's five reactor disassembly basins. Activities are currently underway at 105-R Disassembly Basin and will continue with the 105-P and 105-C disassembly basins. The basins still contain the cooling and shielding water that was present when operations ceased. Low concentrations of radionuclides are present, with tritium, Cs-137, and Sr-90 being the major contributors. Although there is no evidence that any of the basins have leaked, the 50-year-old facilities will eventually contaminate the surrounding groundwaters. The FDD is pursuing a pro-active solution to close the basins in-place and prevent a release to the groundwater. In-situ ion-exchange is currently underway at the R-Reactor Disassembly Basin to reduce the Cs and Sr concentrations to levels that would allow release of the treated water to previously used on-site cooling ponds. A NEPA Environmental Assessment (EA) is being prepared to propose the preferred closure alternative for each of the three basins. The EA will be the primary mechanism to inform the public and gain stakeholder and regulatory approval.

  5. Highly Selective Nuclide Removal from the R-Reactor Disassembly Basin at the SRS

    SciTech Connect

    Pickett, J. B.; Austin, W. E.; Dukes, H. H.

    2002-02-26

    This paper describes the results of a deployment of highly selective ion-exchange resin technologies for the in-situ removal of Cs-137 and Sr-90 from the Savannah River Site (SRS) R-Reactor Disassembly Basin. The deployment was supported by the DOE Office of Science and Technology's (OST, EM-50) National Engineering Technology Laboratory (NETL), as a part of an Accelerated Site Technology Deployment (ASTD) project. The Facilities Decontamination and Decommissioning (FDD) Program at the SRS conducted this deployment as a part of an overall program to deactivate three of the site's five reactor disassembly basins.

  6. ASSESSMENT OF THE POTENTIAL FOR HYDROGEN GENERATION DURING GROUTING OPERATIONS IN C-REACTOR DISASSEMBLY BASIN

    SciTech Connect

    Wiersma, B.

    2011-07-12

    C-reactor disassembly basin is being prepared for deactivation and decommissioning (D and D). D and D activities will consist primarily of immobilizing contaminated scrap components and structures in a grout-like formulation. The disassembly basin will be the first area of the C-reactor building that will be immobilized. The scrap components contain aluminum alloy materials. Any aluminum will corrode very rapidly when it comes in contact with the very alkaline grout (pH > 13), and as a result would produce hydrogen gas. To address this potential deflagration/explosion hazard, Savannah River National Laboratory (SRNL) reviewed and evaluated existing experimental and analytical studies of this issue to determine if any process constraints are necessary. The risk of accumulation of a flammable mixture of hydrogen above the surface of the water during the injection of grout into the C-reactor disassembly area is low if the assessment of the aluminum surface area is reliable. Conservative calculations estimate that there is insufficient aluminum present in the basin areas to result in significant hydrogen accumulation in this local region. The minimum safety margin (or factor) on a 60% LFL criterion for a local region of the basin (i.e., Horizontal Tube Storage) was greater than 3. Calculations also demonstrated that a flammable situation in the vapor space above the basin is unlikely. Although these calculations are conservative, there are some measures that may be taken to further minimize the risk of developing a flammable condition during grouting operations.

  7. A Summary Report on the NPH Evaluation of 105-L Disassembly Basin

    SciTech Connect

    Joshi, J.R.

    2002-04-30

    The L Area Disassembly Basin (LDB) is evaluated for the natural phenomena hazards (NPH) effects due to earthquake, wind, and tornado in accordance with DOE Order 420.1 and DOE-STD-1020. The deterministic analysis is performed for a Performance Category 3 (PC3) level of loads. Savannah River Site (SRS) specific NPH loads and design criteria are obtained from Engineering Standard 01060. It is demonstrated that the demand to capacity (D/C) ratios for primary and significant structural elements are acceptable (equal to or less than 1.0). Thus, 105-L Disassembly Basin building structure is qualified for the PC3 NPH effects in accordance with DOE Order 420.1.

  8. Distribution Coefficients (Kd Values) for Waste Resins Generated from the K and L Disassembly Basin Facilities

    SciTech Connect

    Kaplan, D.I.

    2002-12-02

    The objective of this study was to measure 14C, 129I, and 99Tc Kd values of spent resin generated from the K and L Disassembly Basin Facilities. The scope of the work was to conduct Kd measurements of resins combined in the ratio that they are disposed, 42:58 cation:anion. Because it was not known how these spent resins would be buried, it was necessary to measure the Kd values in such a manner as to simulate both trench and vault disposal. This was accomplished by using an acid-rain simulant (a standard U.S. Environmental Protection Agency protocol) and a cement leachate simulant .

  9. Technical review of WSRC-TR-93-614 criticality safety evaluation for disassembly basin sand filter

    SciTech Connect

    Reed, R.L

    1994-04-27

    The study documented in WSRC-TR-93-614 performed an evaluation of the criticality potential associated with the Disassembly Basin Sand Filter for K and L Areas. The document reviewed incorporated results of calculations documented in the engineering calculation N-CLC-K-00151. Analyses of the contents of disassembly basin sludge has indicated that the sludge contains fissile material in excess of subcritical mass limits as specified in ANSI/ANS standards. Previous studies had determined that the fissile material can not collect into a critical configuration in the basin. Since the sand filter is intended to remove suspended particles from the basin water and could serve as a mechanism to collect the fissile material into a critical configuration, the study examined conditions under which criticality could occur in the sand filter. The study shows that criticality is not considered possible in the sand filter. This review emphasized the technical accuracy and presentation of the evaluation. The evaluation was also examined for the elements required for NCSEs. The review was performed in accordance with the NRTSC technical review requirements and procedures and the E7 Manual technical review requirements. The technical review (per the E7 manual) of the engineering calculation (N-CLC-K-0 1 5 1) was previously performed by this reviewer.

  10. Mechanism of ciliary disassembly.

    PubMed

    Liang, Yinwen; Meng, Dan; Zhu, Bing; Pan, Junmin

    2016-05-01

    As motile organelles and sensors, cilia play pivotal roles in cell physiology, development and organ homeostasis. Ciliary defects are associated with a class of cilia-related diseases or developmental disorders, termed ciliopathies. Even though the presence of cilia is required for diverse functions, cilia can be removed through ciliary shortening or resorption that necessitates disassembly of the cilium, which occurs normally during cell cycle progression, cell differentiation and in response to cellular stress. The functional significance of ciliary resorption is highlighted in controlling the G1-S transition during cell cycle progression. Internal or external cues that trigger ciliary resorption initiate signaling cascades that regulate several downstream events including depolymerization of axonemal microtubules, dynamic changes in actin and the ciliary membrane, regulation of intraflagellar transport and posttranslational modifications of ciliary proteins. To ensure ciliary resorption, both the active disassembly of the cilium and the simultaneous inhibition of ciliary assembly must be coordinately regulated. PMID:26869233

  11. Cilium assembly and disassembly.

    PubMed

    Sánchez, Irma; Dynlacht, Brian David

    2016-06-28

    The primary cilium is an antenna-like, immotile organelle present on most types of mammalian cells, which interprets extracellular signals that regulate growth and development. Although once considered a vestigial organelle, the primary cilium is now the focus of considerable interest. We now know that ciliary defects lead to a panoply of human diseases, termed ciliopathies, and the loss of this organelle may be an early signature event during oncogenic transformation. Ciliopathies include numerous seemingly unrelated developmental syndromes, with involvement of the retina, kidney, liver, pancreas, skeletal system and brain. Recent studies have begun to clarify the key mechanisms that link cilium assembly and disassembly to the cell cycle, and suggest new possibilities for therapeutic intervention. PMID:27350441

  12. AGC-2 Disassembly Report

    SciTech Connect

    William Windes

    2014-05-01

    The Next Generation Nuclear Plant (NGNP) Graphite Research and Development (R&D) Program is currently measuring irradiated material properties for predicting the behavior and operating performance of new nuclear graphite grades available for use within the cores of new very high temperature reactor designs. The Advanced Graphite Creep (AGC) experiment, consisting of six irradiation capsules, will generate irradiated graphite performance data for NGNP reactor operating conditions. The AGC experiment is designed to determine the changes to specific material properties such as thermal diffusivity, thermal expansion, elastic modulus, mechanical strength, irradiation induced dimensional change rate, and irradiation creep for a wide variety of nuclear grade graphite types over a range of high temperature, and moderate doses. A series of six capsules containing graphite test specimens will be used to expose graphite test samples to a dose range from 1 to 7 dpa at three different temperatures (600, 900, and 1200°C) as described in the Graphite Technology Development Plan. Since irradiation induced creep within graphite components is considered critical to determining the operational life of the graphite core, some of the samples will also be exposed to an applied load to determine the creep rate for each graphite type under both temperature and neutron flux. All six AGC capsules in the experiment will be irradiated in the Advanced Test Reactor (ATR). AGC-1 and AGC-2 will be irradiated in the south flux trap and AGC-3–AGC-6 will be irradiated in the east flux trap. The change in flux traps is due to NGNP irradiation priorities requiring the AGC experiment to be moved to accommodate Fuel irradiation experiments. After irradiation, all six AGC capsules will be cooled in the ATR Canal, sized for shipment, and shipped to the Materials and Fuels Complex (MFC) where the capsule will be disassembled in the Hot Fuel Examination Facility (HFEF). During disassembly, the metallic

  13. Static Detection of Disassembly Errors

    SciTech Connect

    Krishnamoorthy, Nithya; Debray, Saumya; Fligg, Alan K

    2009-10-13

    Static disassembly is a crucial first step in reverse engineering executable files, and there is a consider- able body of work in reverse-engineering of binaries, as well as areas such as semantics-based security anal- ysis, that assumes that the input executable has been correctly disassembled. However, disassembly errors, e.g., arising from binary obfuscations, can render this assumption invalid. This work describes a machine- learning-based approach, using decision trees, for stat- ically identifying possible errors in a static disassem- bly; such potential errors may then be examined more closely, e.g., using dynamic analyses. Experimental re- sults using a variety of input executables indicate that our approach performs well, correctly identifying most disassembly errors with relatively few false positives.

  14. First insights into disassembled "evapotranspiration"

    NASA Astrophysics Data System (ADS)

    Chormański, Jarosław; Kleniewska, Małgorzata; Berezowski, Tomasz; Szporak-Wasilewska, Sylwia; Okruszko, Tomasz; Szatyłowicz, Jan; Batelaan, Okke

    2015-04-01

    In this work we present an initial data analysis obtained from a complex tool for measuring water fluxes in wetland ecosystems. The tool was designed to quantify processes related to interception storage on plants leafs. The measurements are conducted by combining readings from various instruments, including: eddy covariance tower (EC), field spectrometer, SapFlow system, rain gauges above and under canopy, soil moisture probes and other. The idea of this set-up is to provide continuous measurement of overall water flux from the ecosystem (EC tower), intercepted water volume and timing (field spectrometers), through-fall (rain gauges above and under canopy), transpiration (SapFlow), evaporation and soil moisture (soil moisture probes). Disassembling the water flux to the above components allows giving more insight to the interception related processes and differentiates them fromthe total evapotranspiration. The measurements are conducted in the Upper Biebrza Basin (NE Poland). The study area is part of the valley and is covered by peat soils (mainly peat moss with the exception of areas near the river) and receives no inundations waters of the Biebrza. The plant community of Agrostietum-Carici caninae has a dominant share here creating an up to 0.6 km wide belt along the river. The area is covered also by Caricion lasiocarpae as well as meadows and pastures Molinio-Arrhenatheretea, Phragmitetum communis. Sedges form a hummock pattern characteristic for the sedge communities in natural river valleys with wetland vegetation. The main result of the measurement set-up will be the analyzed characteristics and dynamics of interception storage for sedge ecosystems and a developed methodology for interception monitoring by use spectral reflectance technique. This will give a new insight to processes of evapotranspiration in wetlands and its component transpiration, evaporation from interception and evaporation from soil. Moreover, other important results of this project

  15. Simulation-based disassembly systems design

    NASA Astrophysics Data System (ADS)

    Ohlendorf, Martin; Herrmann, Christoph; Hesselbach, Juergen

    2004-02-01

    Recycling of Waste of Electrical and Electronic Equipment (WEEE) is a matter of actual concern, driven by economic, ecological and legislative reasons. Here, disassembly as the first step of the treatment process plays a key role. To achieve sustainable progress in WEEE disassembly, the key is not to limit analysis and planning to merely disassembly processes in a narrow sense, but to consider entire disassembly plants including additional aspects such as internal logistics, storage, sorting etc. as well. In this regard, the paper presents ways of designing, dimensioning, structuring and modeling different disassembly systems. Goal is to achieve efficient and economic disassembly systems that allow recycling processes complying with legal requirements. Moreover, advantages of applying simulation software tools that are widespread and successfully utilized in conventional industry sectors are addressed. They support systematic disassembly planning by means of simulation experiments including consecutive efficiency evaluation. Consequently, anticipatory recycling planning considering various scenarios is enabled and decisions about which types of disassembly systems evidence appropriateness for specific circumstances such as product spectrum, throughput, disassembly depth etc. is supported. Furthermore, integration of simulation based disassembly planning in a holistic concept with configuration of interfaces and data utilization including cost aspects is described.

  16. Genetic algorithm for disassembly process planning

    NASA Astrophysics Data System (ADS)

    Kongar, Elif; Gupta, Surendra M.

    2002-02-01

    When a product reaches its end of life, there are several options available for processing it including reuse, remanufacturing, recycling, and disposing (the least desirable option). In almost all cases, a certain level of disassembly may be necessary. Thus, finding an optimal (or near optimal) disassembly sequence is crucial to increasing the efficiency of the process. Disassembly operations are labor intensive, can be costly, have unique characteristics and cannot be considered as reverse of assembly operations. Since the complexity of determining the best disassembly sequence increases with the increase in the number of parts of the product, it is extremely crucial that an efficient methodology for disassembly process planning be developed. In this paper, we present a genetic algorithm for disassembly process planning. A case example is considered to demonstrate the functionality of the algorithm.

  17. Disassemblability modeling technology of configurable product based on disassembly constraint relation weighted design structure matrix(DSM)

    NASA Astrophysics Data System (ADS)

    Qiu, Lemiao; Liu, Xiaojian; Zhang, Shuyou; Sun, Liangfeng

    2014-05-01

    The current research of configurable product disassemblability focuses on disassemblability evaluation and disassembly sequence planning. Little work has been done on quantitative analysis of configurable product disassemblability. The disassemblability modeling technology for configurable product based on disassembly constraint relation weighted design structure matrix (DSM) is proposed. Major factors affecting the disassemblability of configurable product are analyzed, and the disassembling degrees between components in configurable product are obtained by calculating disassembly entropies such as joint type, joint quantity, disassembly path, disassembly accessibility and material compatibility. The disassembly constraint relation weighted DSM of configurable product is constructed and configuration modules are formed by matrix decomposition and tearing operations. The disassembly constraint relation in configuration modules is strong coupling, and the disassembly constraint relation between modules is weak coupling, and the disassemblability configuration model is constructed based on configuration module. Finally, taking a hydraulic forging press as an example, the decomposed weak coupling components are used as configuration modules alone, components with a strong coupling are aggregated into configuration modules, and the disassembly sequence of components inside configuration modules is optimized by tearing operation. A disassemblability configuration model of the hydraulic forging press is constructed. By researching the disassemblability modeling technology of product configuration design based on disassembly constraint relation weighted DSM, the disassembly property in maintenance, recycling and reuse of configurable product are optimized.

  18. Modeling operational behavior of a disassembly line

    NASA Astrophysics Data System (ADS)

    Kizilkaya, Elif A.; Gupta, Surendra M.

    2004-12-01

    In this paper we present a dynamic kanban (pull) system specifically developed for disassembly lines. This type of kanban system is much more complex than the traditional kanban system used in assembly lines. For instance, unlike the assembly line where the external demand occurs only at the last station, the demands in the disassembly case also occur at any of the intermittent stations. The reason is that as a product moves on the disassembly line, various parts are disassembled at every station and accumulated at that station. Therefore, there are as many demand sources as there are number of parts. We consider a case example involving the end-of-life products. Based on the precedence relationships and other criteria such as hazardous properties of the parts, we balance the disassembly line. The results of the disassembly line-balancing problem (DLBP) are used as input to the proposed dynamic kanban system for disassembly line (DKSDL). We compare the performance of the DKSDL to the modified kanban system for disassembly line (MKSDL), which was previously introduced by the authors. We show, via simulation, that the DKSDL is far superior to MKSDL considered.

  19. 19 CFR 181.132 - Disassembly.

    Code of Federal Regulations, 2010 CFR

    2010-04-01

    ... 19 Customs Duties 2 2010-04-01 2010-04-01 false Disassembly. 181.132 Section 181.132 Customs Duties U.S. CUSTOMS AND BORDER PROTECTION, DEPARTMENT OF HOMELAND SECURITY; DEPARTMENT OF THE TREASURY (CONTINUED) NORTH AMERICAN FREE TRADE AGREEMENT Rules of Origin § 181.132 Disassembly. (a) Treated...

  20. 19 CFR 181.132 - Disassembly.

    Code of Federal Regulations, 2013 CFR

    2013-04-01

    ... 19 Customs Duties 2 2013-04-01 2013-04-01 false Disassembly. 181.132 Section 181.132 Customs Duties U.S. CUSTOMS AND BORDER PROTECTION, DEPARTMENT OF HOMELAND SECURITY; DEPARTMENT OF THE TREASURY (CONTINUED) NORTH AMERICAN FREE TRADE AGREEMENT Rules of Origin § 181.132 Disassembly. (a) Treated...

  1. 19 CFR 181.132 - Disassembly.

    Code of Federal Regulations, 2012 CFR

    2012-04-01

    ... 19 Customs Duties 2 2012-04-01 2012-04-01 false Disassembly. 181.132 Section 181.132 Customs Duties U.S. CUSTOMS AND BORDER PROTECTION, DEPARTMENT OF HOMELAND SECURITY; DEPARTMENT OF THE TREASURY (CONTINUED) NORTH AMERICAN FREE TRADE AGREEMENT Rules of Origin § 181.132 Disassembly. (a) Treated...

  2. 19 CFR 181.132 - Disassembly.

    Code of Federal Regulations, 2011 CFR

    2011-04-01

    ... 19 Customs Duties 2 2011-04-01 2011-04-01 false Disassembly. 181.132 Section 181.132 Customs Duties U.S. CUSTOMS AND BORDER PROTECTION, DEPARTMENT OF HOMELAND SECURITY; DEPARTMENT OF THE TREASURY (CONTINUED) NORTH AMERICAN FREE TRADE AGREEMENT Rules of Origin § 181.132 Disassembly. (a) Treated...

  3. Biocomputing based on particle disassembly

    NASA Astrophysics Data System (ADS)

    Nikitin, Maxim P.; Shipunova, Victoria O.; Deyev, Sergey M.; Nikitin, Petr I.

    2014-09-01

    Nanoparticles with biocomputing capabilities could potentially be used to create sophisticated robotic devices with a variety of biomedical applications, including intelligent sensors and theranostic agents. DNA/RNA-based computing techniques have already been developed that can offer a complete set of Boolean logic functions and have been used, for example, to analyse cells and deliver molecular payloads. However, the computing potential of particle-based systems remains relatively unexplored. Here, we show that almost any type of nanoparticle or microparticle can be transformed into autonomous biocomputing structures that are capable of implementing a functionally complete set of Boolean logic gates (YES, NOT, AND and OR) and binding to a target as result of a computation. The logic-gating functionality is incorporated into self-assembled particle/biomolecule interfaces (demonstrated here with proteins) and the logic gating is achieved through input-induced disassembly of the structures. To illustrate the capabilities of the approach, we show that the structures can be used for logic-gated cell targeting and advanced immunoassays.

  4. Biocomputing based on particle disassembly.

    PubMed

    Nikitin, Maxim P; Shipunova, Victoria O; Deyev, Sergey M; Nikitin, Petr I

    2014-09-01

    Nanoparticles with biocomputing capabilities could potentially be used to create sophisticated robotic devices with a variety of biomedical applications, including intelligent sensors and theranostic agents. DNA/RNA-based computing techniques have already been developed that can offer a complete set of Boolean logic functions and have been used, for example, to analyse cells and deliver molecular payloads. However, the computing potential of particle-based systems remains relatively unexplored. Here, we show that almost any type of nanoparticle or microparticle can be transformed into autonomous biocomputing structures that are capable of implementing a functionally complete set of Boolean logic gates (YES, NOT, AND and OR) and binding to a target as result of a computation. The logic-gating functionality is incorporated into self-assembled particle/biomolecule interfaces (demonstrated here with proteins) and the logic gating is achieved through input-induced disassembly of the structures. To illustrate the capabilities of the approach, we show that the structures can be used for logic-gated cell targeting and advanced immunoassays. PMID:25129073

  5. Chromatin remodeling by nucleosome disassembly in vitro.

    PubMed

    Lorch, Yahli; Maier-Davis, Barbara; Kornberg, Roger D

    2006-02-28

    The RSC chromatin-remodeling complex completely disassembles a nucleosome in the presence of the histone chaperone Nap1 and ATP. Disassembly occurs in a stepwise manner, with the removal of H2A/H2B dimers, followed by the rest of the histones and the release of naked DNA. RSC and related chromatin-remodeling complexes may be responsible for the removal of promoter nucleosomes during transcriptional activation in vivo. PMID:16492771

  6. Damage-Free Relief-Valve Disassembly

    NASA Technical Reports Server (NTRS)

    Haselmaier, H.

    1986-01-01

    Tool safely disassembles relief valves without damage to sensitive parts. Relief-valve disassembly tool used to extract valve nozzle from its housing. Holding device on tool grops nozzle. When user strikes hammer against impact disk, holding device pulls nozzle from press fit. Previously, nozzle dislodged by striking spindle above it, but practice often damaged retaining screw. New tool removes nozzle directly. With minor modifications, tool adapted to valves from different manufacturers.

  7. Disassembling Iron Availability to Phytoplankton

    PubMed Central

    Shaked, Yeala; Lis, Hagar

    2012-01-01

    The bioavailability of iron to microorganisms and its underlying mechanisms have far reaching repercussions to many natural systems and diverse fields of research, including ocean biogeochemistry, carbon cycling and climate, harmful algal blooms, soil and plant research, bioremediation, pathogenesis, and medicine. Within the framework of ocean sciences, short supply and restricted bioavailability of Fe to phytoplankton is thought to limit primary production and curtail atmospheric CO2 drawdown in vast ocean regions. Yet a clear-cut definition of bioavailability remains elusive, with elements of iron speciation and kinetics, phytoplankton physiology, light, temperature, and microbial interactions, to name a few, all intricately intertwined into this concept. Here, in a synthesis of published and new data, we attempt to disassemble the complex concept of iron bioavailability to phytoplankton by individually exploring some of its facets. We distinguish between the fundamentals of bioavailability – the acquisition of Fe-substrate by phytoplankton – and added levels of complexity involving interactions among organisms, iron, and ecosystem processes. We first examine how phytoplankton acquire free and organically bound iron, drawing attention to the pervasiveness of the reductive uptake pathway in both prokaryotic and eukaryotic autotrophs. Turning to acquisition rates, we propose to view the availability of various Fe-substrates to phytoplankton as a spectrum rather than an absolute “all or nothing.” We then demonstrate the use of uptake rate constants to make comparisons across different studies, organisms, Fe-compounds, and environments, and for gaging the contribution of various Fe-substrates to phytoplankton growth in situ. Last, we describe the influence of aquatic microorganisms on iron chemistry and fate by way of organic complexation and bio-mediated redox transformations and examine the bioavailability of these bio-modified Fe species. PMID:22529839

  8. D-amino acids trigger biofilm disassembly.

    PubMed

    Kolodkin-Gal, Ilana; Romero, Diego; Cao, Shugeng; Clardy, Jon; Kolter, Roberto; Losick, Richard

    2010-04-30

    Bacteria form communities known as biofilms, which disassemble over time. In our studies outlined here, we found that, before biofilm disassembly, Bacillus subtilis produced a factor that prevented biofilm formation and could break down existing biofilms. The factor was shown to be a mixture of D-leucine, D-methionine, D-tyrosine, and D-tryptophan that could act at nanomolar concentrations. D-amino acid treatment caused the release of amyloid fibers that linked cells in the biofilm together. Mutants able to form biofilms in the presence of D-amino acids contained alterations in a protein (YqxM) required for the formation and anchoring of the fibers to the cell. D-amino acids also prevented biofilm formation by Staphylococcus aureus and Pseudomonas aeruginosa. D-amino acids are produced by many bacteria and, thus, may be a widespread signal for biofilm disassembly. PMID:20431016

  9. Combinatorial optimization methods for disassembly line balancing

    NASA Astrophysics Data System (ADS)

    McGovern, Seamus M.; Gupta, Surendra M.

    2004-12-01

    Disassembly takes place in remanufacturing, recycling, and disposal with a line being the best choice for automation. The disassembly line balancing problem seeks a sequence which: minimizes workstations, ensures similar idle times, and is feasible. Finding the optimal balance is computationally intensive due to factorial growth. Combinatorial optimization methods hold promise for providing solutions to the disassembly line balancing problem, which is proven to belong to the class of NP-complete problems. Ant colony optimization, genetic algorithm, and H-K metaheuristics are presented and compared along with a greedy/hill-climbing heuristic hybrid. A numerical study is performed to illustrate the implementation and compare performance. Conclusions drawn include the consistent generation of optimal or near-optimal solutions, the ability to preserve precedence, the speed of the techniques, and their practicality due to ease of implementation.

  10. Electronic waste disassembly with industrial waste heat.

    PubMed

    Chen, Mengjun; Wang, Jianbo; Chen, Haiyian; Ogunseitan, Oladele A; Zhang, Mingxin; Zang, Hongbin; Hu, Jiukun

    2013-01-01

    Waste printed circuit boards (WPCBs) are resource-rich but hazardous, demanding innovative strategies for post-consumer collection, recycling, and mining for economically precious constituents. A novel technology for disassembling electronic components from WPCBs is proposed, using hot air to melt solders and to separate the components and base boards. An automatic heated-air disassembling equipment was designed to operate at a heating source temperature at a maximum of 260 °C and an inlet pressure of 0.5 MPa. A total of 13 individual WPCBs were subjected to disassembling tests at different preheat temperatures in increments of 20 °C between 80 and 160 °C, heating source temperatures ranging from 220 to 300 °C in increments of 20 °C, and incubation periods of 1, 2, 4, 6, or 8 min. For each experimental treatment, the disassembly efficiency was calculated as the ratio of electronic components released from the board to the total number of its original components. The optimal preheat temperature, heating source temperature, and incubation period to disassemble intact components were 120 °C, 260 °C, and 2 min, respectively. The disassembly rate of small surface mount components (side length ≤ 3 mm) was 40-50% lower than that of other surface mount components and pin through hole components. On the basis of these results, a reproducible and sustainable industrial ecological protocol using steam produced by industrial exhaust heat coupled to electronic-waste recycling is proposed, providing an efficient, promising, and green method for both electronic component recovery and industrial exhaust heat reutilization. PMID:24073987

  11. Multi-kanban mechanism for appliance disassembly

    NASA Astrophysics Data System (ADS)

    Udomsawat, Gun; Gupta, Surendra M.

    2005-11-01

    The use of household appliances continues to rise every year. A significant number of End-Of-Life (EOL) appliances are generated because of the introduction of newer models that are more attractive, efficient and affordable. Others are, of course, generated when they become non-functional. Many regulations encourage recycling of EOL appliances to reduce the amount of waste sent to landfills. In addition, EOL appliances offer the appliance manufacturing and remanufacturing industries a source of less expensive raw materials and components. For this reason product recovery has become a subject of interest during the past decade. In this paper, we study the disassembly line for appliance disassembly. We discuss and incorporate some of the complications that are inherent in disassembly line including product arrival, demand arrival, inventory fluctuation and production control mechanisms. We show how to overcome such complications by implementing a multi-kanban system in the appliance disassembly line setting. The multi-kanban system (MKS) relies on dynamic routing of kanbans according to the state of the system. We investigate the multi-kanban mechanism using simulation and explore the effect of product mix on performance of the traditional push system (TPS) and MKS in terms of controlling the system's inventory while attempting to achieve a decent customer service level.

  12. Automatized disassembly of electrical industrial motors

    NASA Astrophysics Data System (ADS)

    Karlsson, Bjoern; Fugger, Erwin

    1998-10-01

    Since February 1996 a large-scale European project called REMPRODUSE-Cu has been in progress. Its main objective is to provide a comprehensive approach to overcome the problems found when electromechanical systems reach the end of their useful life. How these problems could be overcome by a smarter recycling system and a smarter product design is in this project exemplified for electric motors. Today small electric motors when worn out are put in a shredder, due to problems with the disassembly. To be able to perform the disassembly in a proper way measurement and sensing as well as industrial robots will play an important part. In this paper a robotized work station for end-of-life treatment of industrial motors is presented. There are two main steps in the work. The first step is an inspection where the functionality of the motor is checked and the second step is robotized automatic disassembly for motors that can not be reused. This paper deals mainly with the second step. The robotized disassembly station consists of two industrial robots with appliances.

  13. Myelination: actin disassembly leads the way

    PubMed Central

    Samanta, Jayshree; Salzer, James L.

    2016-01-01

    The mechanisms that drive the spiral wrapping of the myelin sheath around axons are poorly understood. Two papers in this issue of Developmental Cell demonstrate that actin disassembly, rather than actin assembly, predominates during oligodendrocyte maturation and is critical for the genesis of the central myelin sheath. PMID:26218317

  14. Multikanban model for disassembly line with demand fluctuation

    NASA Astrophysics Data System (ADS)

    Udomsawat, Gun; Gupta, Surendra M.; Al-Turki, Yousef A. Y.

    2004-02-01

    In recent years, the continuous growth in consumer waste and dwindling natural resources has seriously threatened the environment. Realizing this, several countries have passed regulations that force manufacturers not only to manufacture environmentally conscious products, but also to take back their used products from consumers so that the components and materials recovered from the products may be reused and/or recycled. Disassembly plays an important role in product recovery. A disassembly line is perhaps the most suitable setting for disassembly of products in large quantities. Because a disassembly line has a tendency to generate excessive inventory, employing a kanban system can reduce the inventory level and let the system run more efficiently. A disassembly line is quite different from an assembly line. For example, not only can the demand arrive at the last station, it can also arrive at any of the other stations in the system. The demand for a component on the disassembly line could fluctuate widely. In fact, there are many other complicating matters that need to be considered to implement the concept of kanbans in such an environment. In this paper, we discuss the complications that are unique to a disassembly line. We discuss the complications in utilizing the conventional production control mechanisms in a disassembly line setting. We then show how to overcome them by implementing kanbans in a disassembly line setting with demand fluctuation and introduce the concept of multi-kanban mechanism. We demonstrate its effectiveness using a simulation model. An example is presented to illustrate the concept.

  15. A Heuristic for Disassembly Planning in Remanufacturing System

    PubMed Central

    2014-01-01

    This study aims to improve the efficiency of disassembly planning in remanufacturing environment. Even though disassembly processes are considered as the reverse of the corresponding assembly processes, under some technological and management constraints the feasible and efficient disassembly planning can be achieved by only well-designed algorithms. In this paper, we propose a heuristic for disassembly planning with the existence of disassembled part/subassembly demands. A mathematical model is formulated for solving this problem to determine the sequence and quantity of disassembly operations to minimize the disassembly costs under sequence-dependent setup and capacity constraints. The disassembly costs consist of the setup cost, part inventory holding cost, disassembly processing cost, and purchasing cost that resulted from unsatisfied demand. A simple but efficient heuristic algorithm is proposed to improve the quality of solution and computational efficiency. The main idea of heuristic is to divide the planning horizon into the smaller planning windows and improve the computational efficiency without much loss of solution quality. Performances of the heuristic are investigated through the computational experiments. PMID:24895679

  16. A heuristic for disassembly planning in remanufacturing system.

    PubMed

    Sung, Jinmo; Jeong, Bongju

    2014-01-01

    This study aims to improve the efficiency of disassembly planning in remanufacturing environment. Even though disassembly processes are considered as the reverse of the corresponding assembly processes, under some technological and management constraints the feasible and efficient disassembly planning can be achieved by only well-designed algorithms. In this paper, we propose a heuristic for disassembly planning with the existence of disassembled part/subassembly demands. A mathematical model is formulated for solving this problem to determine the sequence and quantity of disassembly operations to minimize the disassembly costs under sequence-dependent setup and capacity constraints. The disassembly costs consist of the setup cost, part inventory holding cost, disassembly processing cost, and purchasing cost that resulted from unsatisfied demand. A simple but efficient heuristic algorithm is proposed to improve the quality of solution and computational efficiency. The main idea of heuristic is to divide the planning horizon into the smaller planning windows and improve the computational efficiency without much loss of solution quality. Performances of the heuristic are investigated through the computational experiments. PMID:24895679

  17. Disassembly sequencing problem: a case study of a cell phone

    NASA Astrophysics Data System (ADS)

    Gupta, Surendra M.; Erbis, Evren; McGovern, Seamus M.

    2004-12-01

    Selection of an optimal disassembly sequence is essential for the efficient processing of a product at the end of its life. Disassembly sequences are listings of disassembly actions (such as the separation of an assembly into two or more subassemblies, or removing one or more connections between components). Disassembly takes place in remanufacturing, recycling, and disposal with a disassembly line being the best choice for automation. In this paper, the disassembly sequencing problem is solved for a cell phone case on a disassembly line, seeking a sequence which is feasible, minimizes the number of workstations (and hence idle times), provides for early removal of high demand/value parts, provides the removal of parts that lead to the access of greatest number of still-installed parts, and early removal of hazardous parts as well as for the grouping of parts for removal having identical part removal directions. Since finding the optimal sequence is computationally intensive due to factorial growth, a heuristic method is used taking into account various disassembly-specific matters. Using the experimentally determined precedence relationships and task times of a real-world cell phone, a MATLAB program is designed and a sequencing solution is generated. Finally, Design for Disassembly (DFD) improvements are recommended with respect to environmentally conscious manufacturing.

  18. Postulated accident scenarios in weapons disassembly

    SciTech Connect

    Payne, S.S.

    1997-06-01

    A very brief summary of three postulated accident scenarios for weapons disassembly is provided in the paper. The first deals with a tetrahedral configuration of four generic pits; the second, an infinite planar array of generic pits with varying interstitial water density; and the third, a spherical shell with internal mass suspension in water varying the size and mass of the shell. Calculations were performed using the Monte Carlo Neutron Photon transport code MCNP4A. Preliminary calculations pointed to a need for higher resolution of small pit separation regimes and snapshots of hydrodynamic processes of water/plutonium mixtures.

  19. Impact of different disassembly line balancing algorithms on the performance of dynamic kanban system for disassembly line

    NASA Astrophysics Data System (ADS)

    Kizilkaya, Elif A.; Gupta, Surendra M.

    2005-11-01

    In this paper, we compare the impact of different disassembly line balancing (DLB) algorithms on the performance of our recently introduced Dynamic Kanban System for Disassembly Line (DKSDL) to accommodate the vagaries of uncertainties associated with disassembly and remanufacturing processing. We consider a case study to illustrate the impact of various DLB algorithms on the DKSDL. The approach to the solution, scenario settings, results and the discussions of the results are included.

  20. Probabilistic Risk Assessment of disassembly procedures

    SciTech Connect

    O`Brien, D.A.; Bement, T.R.; Letellier, B.C.

    1993-10-01

    Probabilistic Risk (Safety) Assessment (PRA or PSA) is an analytic methodology for identifying the combination of events that, if they occur, lead to accidents. Accidents are defined as those events causing loss or injury to people, property, or the environment. PRA also provides a method for estimating the frequency of occurrence of each combination of events and the consequences of each accident. The Los Alamos effort for this study is summarized as follows: The focus of the Los Alamos study was on evaluating the risks specifically associated with disassembling a Los Alamos-designed device. The PRA for the disassembly operation included a detailed evaluation only for those potential accident sequences which could lead to significant off-site consequences and affect public health. The overall purpose of this study was to investigate the feasibility of a risk consequence goal for DOE operations. Often called a Level 3 PRA (or PSA), the methods are general and can with a little modification be applied to other procedures or processes.

  1. Disassembly and Sanitization of Classified Matter

    SciTech Connect

    Stockham, Dwight J.; Saad, Max P.

    2008-01-15

    The Disassembly Sanitization Operation (DSO) process was implemented to support weapon disassembly and disposition by using recycling and waste minimization measures. This process was initiated by treaty agreements and reconfigurations within both the DOD and DOE Complexes. The DOE is faced with disassembling and disposing of a huge inventory of retired weapons, components, training equipment, spare parts, weapon maintenance equipment, and associated material. In addition, regulations have caused a dramatic increase in the need for information required to support the handling and disposition of these parts and materials. In the past, huge inventories of classified weapon components were required to have long-term storage at Sandia and at many other locations throughout the DoE Complex. These materials are placed in onsite storage unit due to classification issues and they may also contain radiological and/or hazardous components. Since no disposal options exist for this material, the only choice was long-term storage. Long-term storage is costly and somewhat problematic, requiring a secured storage area, monitoring, auditing, and presenting the potential for loss or theft of the material. Overall recycling rates for materials sent through the DSO process have enabled 70 to 80% of these components to be recycled. These components are made of high quality materials and once this material has been sanitized, the demand for the component metals for recycling efforts is very high. The DSO process for NGPF, classified components established the credibility of this technique for addressing the long-term storage requirements of the classified weapons component inventory. The success of this application has generated interest from other Sandia organizations and other locations throughout the complex. Other organizations are requesting the help of the DSO team and the DSO is responding to these requests by expanding its scope to include Work-for- Other projects. For example

  2. Alignment Pins for Assembling and Disassembling Structures

    NASA Technical Reports Server (NTRS)

    Campbell, Oliver C.

    2008-01-01

    Simple, easy-to-use, highly effective tooling has been devised for maintaining alignment of bolt holes in mating structures during assembly and disassembly of the structures. The tooling was originally used during removal of a body flap from the space shuttle Atlantis, in which misalignments during removal of the last few bolts could cause the bolts to bind in their holes. By suitably modifying the dimensions of the tooling components, the basic design of the tooling can readily be adapted to other structures that must be maintained in alignment. The tooling includes tapered, internally threaded alignment pins designed to fit in the bolt holes in one of the mating structures, plus a draw bolt and a cup that are used to install or remove each alignment pin. In preparation for disassembly of two mating structures, external supports are provided to prevent unintended movement of the structures. During disassembly of the structures, as each bolt that joins the structures is removed, an alignment pin is installed in its place. Once all the bolts have been removed and replaced with pins, the pins maintain alignment as the structures are gently pushed or pulled apart on the supports. In assembling the two structures, one reverses the procedure described above: pins are installed in the bolt holes, the structures are pulled or pushed together on the supports, then the pins are removed and replaced with bolts. The figure depicts the tooling and its use. To install an alignment pin in a bolt hole in a structural panel, the tapered end of the pin is inserted from one side of the panel, the cup is placed over the pin on the opposite side of the panel, the draw bolt is inserted through the cup and threaded into the pin, the draw bolt is tightened to pull the pin until the pin is seated firmly in the hole, then the draw bolt and cup are removed, leaving the pin in place. To remove an alignment pin, the cup is placed over the pin on the first-mentioned side of the panel, the draw

  3. CNS myelin wrapping is driven by actin disassembly.

    PubMed

    Zuchero, J Bradley; Fu, Meng-Meng; Sloan, Steven A; Ibrahim, Adiljan; Olson, Andrew; Zaremba, Anita; Dugas, Jason C; Wienbar, Sophia; Caprariello, Andrew V; Kantor, Christopher; Leonoudakis, Dmitri; Leonoudakus, Dmitri; Lariosa-Willingham, Karen; Kronenberg, Golo; Gertz, Karen; Soderling, Scott H; Miller, Robert H; Barres, Ben A

    2015-07-27

    Myelin is essential in vertebrates for the rapid propagation of action potentials, but the molecular mechanisms driving its formation remain largely unknown. Here we show that the initial stage of process extension and axon ensheathment by oligodendrocytes requires dynamic actin filament assembly by the Arp2/3 complex. Unexpectedly, subsequent myelin wrapping coincides with the upregulation of actin disassembly proteins and rapid disassembly of the oligodendrocyte actin cytoskeleton and does not require Arp2/3. Inducing loss of actin filaments drives oligodendrocyte membrane spreading and myelin wrapping in vivo, and the actin disassembly factor gelsolin is required for normal wrapping. We show that myelin basic protein, a protein essential for CNS myelin wrapping whose role has been unclear, is required for actin disassembly, and its loss phenocopies loss of actin disassembly proteins. Together, these findings provide insight into the molecular mechanism of myelin wrapping and identify it as an actin-independent form of mammalian cell motility. PMID:26166300

  4. Montmorillonite-induced Bacteriophage φ6 Disassembly

    NASA Astrophysics Data System (ADS)

    Trusiak, A.; Gottlieb, P.; Katz, A.; Alimova, A.; Steiner, J. C.; Block, K. A.

    2012-12-01

    It is estimated that there are 1031 virus particles on Earth making viruses an order of magnitude more prevalent in number than prokaryotes with the vast majority of viruses being bacteriophages. Clays are a major component of soils and aquatic sediments and can react with RNA, proteins and bacterial biofilms. The clays in soils serve as an important moderator between phage and their host bacteria, helping to preserve the evolutionary balance. Studies on the effects of clays on viral infectivity have given somewhat contradictory results; possibly a consequence of clay-virus interactions being dependent on the unique structure of particular viruses. In this work, the interaction between montmorillonite and the bacteriophage φ6 is investigated. φ6 is a member of the cystovirus family that infects Pseudomonas syringe, a common plant pathogen. As a member of the cystovirus family with an enveloped structure, φ6 serves as a model for reoviruses, a human pathogen. Experiments were conducted with φ6 suspended in dilute, purified homoionic commercial-grade montmorillonite over a range of virus:clay ratios. At a 1:100000 virus:clay ratio, the clay reduced viral infectivity by 99%. The minimum clay to virus ratio which results in a measurable reduction of P. syringae infection is 1:1. Electron microscopy demonstrates that mixed suspensions of smectite and virus co-aggregate to form flocs encompassing virions within the smectite. Both free viral particles as well as those imbedded in the flocs are seen in the micrographs to be missing the envelope- leaving only the nucleocapsid (NC) intact; indicating that smectite inactivates the virus by envelope disassembly. These results have strong implications in the evolution of both the φ6 virus and its P. syringae host cells. TEM of aggregate showing several disassembled NCs.

  5. 13. View of disassembled steam engine showing cylinder, piston rod, ...

    Library of Congress Historic Buildings Survey, Historic Engineering Record, Historic Landscapes Survey

    13. View of disassembled steam engine showing cylinder, piston rod, parallel motion links and steam chest. - Hacienda Azucarera La Esperanza, Steam Engine & Mill, 2.65 Mi. N of PR Rt. 2 Bridge over Manati River, Manati, Manati Municipio, PR

  6. 12. View of disassembled steam engine sitting in open shed ...

    Library of Congress Historic Buildings Survey, Historic Engineering Record, Historic Landscapes Survey

    12. View of disassembled steam engine sitting in open shed showing base, columns and entablature. - Hacienda Azucarera La Esperanza, Steam Engine & Mill, 2.65 Mi. N of PR Rt. 2 Bridge over Manati River, Manati, Manati Municipio, PR

  7. New package for Belleville spring permits rate change, easy disassembly

    NASA Technical Reports Server (NTRS)

    Mac Glashan, W. F.

    1964-01-01

    A spring package, with grooves to hold the spring washers at the inner and outer edges, reduces hysteresis to a minimum. Three-segment retainers permit easy disassembly so that the spring rate can be changed.

  8. Actin network disassembly powers dissemination of Listeria monocytogenes.

    PubMed

    Talman, Arthur M; Chong, Ryan; Chia, Jonathan; Svitkina, Tatyana; Agaisse, Hervé

    2014-01-01

    Several bacterial pathogens hijack the actin assembly machinery and display intracellular motility in the cytosol of infected cells. At the cell cortex, intracellular motility leads to bacterial dissemination through formation of plasma membrane protrusions that resolve into vacuoles in adjacent cells. Here, we uncover a crucial role for actin network disassembly in dissemination of Listeria monocytogenes. We found that defects in the disassembly machinery decreased the rate of actin tail turnover but did not affect the velocity of the bacteria in the cytosol. By contrast, defects in the disassembly machinery had a dramatic impact on bacterial dissemination. Our results suggest a model of L. monocytogenes dissemination in which the disassembly machinery, through local recycling of the actin network in protrusions, fuels continuous actin assembly at the bacterial pole and concurrently exhausts cytoskeleton components from the network distal to the bacterium, which enables membrane apposition and resolution of protrusions into vacuoles. PMID:24155331

  9. Systems impacts of spent fuel disassembly alternatives

    SciTech Connect

    Not Available

    1984-07-01

    Three studies were completed to evaluate four alternatives to the disposal of intact spent fuel assemblies in a geologic repository. A preferred spent fuel waste form for disposal was recommended on consideration of (1) package design and fuel/package interaction, (2) long-term, in-repository performance of the waste form, and (3) overall process performance and costs for packaging, handling, and emplacement. The four basic alternative waste forms considered were (1) end fitting removal, (2) fission gas venting, (3) disassembly and close packing, and (4) shearing/immobilization. None of the findings ruled out any alternative on the basis of waste package considerations or long-term performance of the waste form. The third alternative offers flexibility in loading that may prove attractive in the various geologic media under consideration, greatly reduces the number of packages, and has the lowest unit cost. These studies were completed in October, 1981. Since then Westinghouse Electric Corporation and the Office of Nuclear Waste Isolation have completed studies in related fields. This report is now being published to provide publicly the background material that is contained within. 47 references, 28 figures, 31 tables.

  10. Disassembly and characterization of liquid crystal screens.

    PubMed

    Juchneski, Nichele C F; Scherer, Janine; Grochau, Inês H; Veit, Hugo M

    2013-06-01

    The technology used in the manufacturing of televisions and monitors has been changing in recent years. Monitors with liquid crystal displays (LCD) emerged in the market with the aim of replacing cathode ray tube monitors. As a result, the disposal of this type of product, which is already very high, will increase. Thus, without accurate knowledge of the components and materials present in an LCD monitor, the recycling of materials, such as mercury, thermoplastic polymers, glasses, metals and precious metals amongst others, is not only performed, but allows contamination of soil, water and air with the liberation of toxic compounds present in this type of waste when disposed of improperly. Therefore, the objective of this study was to disassemble and characterize the materials in this type of waste, identify the composition, amount and form to enable, in further work, the development of recycling routes. After various tests and analyses, it was observed that an LCD display can be recycled, provided that precautions are taken. Levels of lead, fluoride and copper are above those permitted by the Brazilian law, characterizing this residue as having a high pollution potential. The materials present in printed circuit boards (base and precious metals)-thermoplastics, such as polyethylene terephthalate, acrylic, acrylonitrile butadiene styrene and polycarbonate and metals, such as steel and aluminum, and a layer of indium (in the internal face of the glass)-are components that make a point in terms of their potential for recycling. PMID:23615511

  11. Dynamic covalent assembly and disassembly of nanoparticle aggregates.

    PubMed

    Borsley, Stefan; Kay, Euan R

    2016-07-12

    The quantitative assembly and disassembly of a new type of dynamic covalent nanoparticle (NP) building block is reported. In situ spectroscopic characterization reveals constitutionally adaptive NP-bound monolayers of boronate esters. Ditopic linker molecules are used to produce covalently connected AuNP assemblies, displaying open dendritic morphologies, and which, despite being linked by covalent bonds, can be fully disassembled on application of an appropriate chemical stimulus. PMID:27001937

  12. Coupled anion and cation ordering in Sr{sub 3}RFe{sub 4}O{sub 10.5} (R=Y, Ho, Dy) anion-deficientperovskites

    SciTech Connect

    Abakumov, Artem M.; D'Hondt, Hans; Rossell, Marta D.; Tsirlin, Alexander A.; Gutnikova, Olga; Filimonov, Dmitry S.; Schnelle, Walter; Rosner, Helge; Hadermann, Joke; Van Tendeloo, Gustaaf; Antipov, Evgeny V.

    2010-12-15

    The Sr{sub 3}RFe{sub 4}O{sub 10.5} (R=Y, Ho, Dy) anion-deficient perovskites were prepared using a solid-state reaction in evacuated sealed silica tubes. Transmission electron microscopy and {sup 57}Fe Moessbauer spectroscopy evidenced a complete A-cations and oxygen vacancies ordering. The structure model was further refined by ab initio structure relaxation, based on density functional theory calculations. The compounds crystallize in a tetragonal a{approx}2{radical}2a{sub p{approx}}11.3 A, c{approx}4c{sub p{approx}}16 A unit cell (a{sub p}: parameter of the perovskite subcell) with the P4{sub 2}/mnm space group. Oxygen vacancies reside in the (FeO{sub 5/4{open_square}3/4}) layers, comprising corner-sharing FeO{sub 4} tetrahedra and FeO{sub 5} tetragonal pyramids, which are sandwiched between the layers of the FeO{sub 6} octahedra. Smaller R atoms occupy the 9-fold coordinated position, whereas the 10-fold coordinated positions are occupied by larger Sr atoms. The Fe sublattice is ordered aniferromagnetically up to at least 500 K, while the rare-earth sublattice remains disordered down to 2 K. -- Graphical abstract: The Sr{sub 3}RFe{sub 4}O{sub 10.5} (R=Y, Ho, Dy) anion-deficient perovskites with a complete ordering of the A-cations and oxygen vacancies have been prepared using a solid-state reaction in evacuated sealed silica tubes. Oxygen vacancies reside in the (FeO{sub 5/43/4}) layers, comprising corner-sharing FeO{sub 4} tetrahedra and FeO{sub 5} tetragonal pyramids, which are sandwiched between the layers of the FeO{sub 6} octahedra. Smaller R atoms occupy the 9-fold coordinated position, whereas the 10-fold coordinated positions are occupied by larger Sr atoms.

  13. Directed disassembly of an interfacial rubisco protein network.

    PubMed

    Onaizi, Sagheer A; Malcolm, Andrew S; He, Lizhong; Middelberg, Anton P J

    2007-05-22

    We present the first study of the directed disassembly of a protein network at the air-water interface by the synergistic action of a surfactant and an enzyme. We seek to understand the fundamentals of protein network disassembly by using rubisco adsorbed at the air-water interface as a model. We propose that rubisco adsorption at the air-water interface results in the formation of a fishnet-like network of interconnected protein molecules, capable of transmitting lateral force. The mechanical properties of the rubisco network during assembly and disassembly at the air-water interface were characterized by direct measurement of laterally transmitted force through the protein network using the Cambridge interfacial tensiometer. We have shown that, when used individually, either 2 ppm of the surfactant, sodium dodecyl benzyl sulfonate (SDOBS), or 2 ppm of the enzyme, subtilisin A (SA), were insufficient to completely disassemble the rubisco network within 1 h of treatment. However, a combination of 2 ppm SDOBS and 2 ppm SA led to almost complete disassembly within 1 h. Increasing the concentration of SA in the mixture from 2 to 10 ppm, while keeping the SDOBS concentration constant, significantly decreased the time required to completely disassemble the rubisco network. Furthermore, the initial rate of network disassembly using formulations containing SDOBS was surprisingly insensitive to this increase in SA concentration. This study gives insight into the role of lateral interactions between protein molecules at interfaces in stabilizing interfacial protein networks and shows that surfactant and enzyme working in combination proves more effective at disrupting and mobilizing the interfacial protein network than the action of either agent alone. PMID:17447802

  14. Sensor system for disassembly of electrical industrial motors

    NASA Astrophysics Data System (ADS)

    Karlsson, Bjoern; Karlsson, Nils; Wide, Peter

    1998-01-01

    The role of reuse and recycling has become more and more important due to environmental reasons during the last years. To realize this goal, flexible automatic disassembly is needed. We have investigated a robotized work station supported by sensors as one possible solution. As an example an electrical motor has in detail been disassembled with the aim to separate the different materials. In an industrial motor the copper is situated in the stator windings and in the junction box. There are three pats in the proposed disassembly work, an inspection phase where the functionality of the motor is determined, a manual disassembly task where the junction box, the shields and the rotor are removed and finally the last part is an automatic removal of the stator windings. The focus in this paper is on the first part, the functionality test. In this test different faults of the motor is identified and a decision in made whether the motor should be repaired or disassembled. The test is performed during start-up of the motor without any load. Current, voltage, vibration and rotation sped is measured. The tested conditions results in a performance classification of the motor by Principal Component Analysis, PCA.

  15. Disassembling "evapotranspiration" in-situ with a complex measurement tool

    NASA Astrophysics Data System (ADS)

    Chormanski, Jaroslaw; Kleniewska, Malgorzata; Berezowski, Tomasz; Sporak-Wasilewska, Sylwia; Okruszko, Tomasz; Szatylowicz, Jan; Batelaan, Okke

    2014-05-01

    In this work we present a complex tool for measuring water fluxes in wetland ecosystems. The tool was designed to quantify processes related to interception storage on plants leafs. The measurements are conducted by combining readings from various instruments, including: eddy covariance tower (EC), field spectrometer, SapFlow system, rain gauges above and under canopy, soil moisture probes and other. The idea of this set-up is to provide continuous measurement of overall water flux from the ecosystem (EC tower), intercepted water volume and timing (field spectrometers), through-fall (rain gauges above and under canopy), transpiration (SapFlow), evaporation and soil moisture (soil moisture probes). Disassembling the water flux to the above components allows giving more insight to the interception related processes and differentiates them from the total evapotranspiration. The measurements are conducted in the Upper Biebrza Basin (NE Poland). The study area is part of the valley and is covered by peat soils (mainly peat moss with the exception of areas near the river) and receives no inundations waters of the Biebrza. The plant community of Agrostietum-Carici caninae has a dominant share here creating an up to 0.6 km wide belt along the river. The area is covered also by Caricion lasiocarpae as well as meadows and pastures Molinio-Arrhenatheretea, Phragmitetum communis. Sedges form a hummock pattern characteristic for the sedge communities in natural river valleys with wetland vegetation. The main result of the measurement set-up will be the analyzed characteristics and dynamics of interception storage for sedge ecosystems and a developed methodology for interception monitoring by use spectral reflectance technique. This will give a new insight to processes of evapotranspiration in wetlands and its components transpiration, evaporation from interception and evaporation from soil. Moreover, other important results of this project will be the estimation of energy and

  16. Capillarity-induced disassembly of virions in carbon nanotubes

    NASA Astrophysics Data System (ADS)

    Fan, Xiaobin; Barclay, J. Elaine; Peng, Wenchao; Li, Yang; Li, Xianyu; Zhang, Guoliang; Evans, David J.; Zhang, Fengbao

    2008-04-01

    Studying the transport and fate of viruses through nanochannels is of great importance. By using the nanochannel of a carbon nanotube (CNT) as an ideal model, we evaluated the possibility of capillarity-induced viral transport through a closely fitting nanochannel and explored the mechanisms involved. It is shown both experimentally and theoretically that Cowpea mosaic virus can enter CNTs by capillarity. However, when introduced into a nanotube the protein capsid may disassemble. During the initial capillary filling stage, anomalous needle-shaped high pressure exists in the centre of the nanotube's entrance. This high pressure, combining with the significant negative pressure within the nanotube, may account for the disassembly of the virions.

  17. Coordinated disassembly of the divisome complex in Escherichia coli.

    PubMed

    Söderström, Bill; Mirzadeh, Kiavash; Toddo, Stephen; von Heijne, Gunnar; Skoglund, Ulf; Daley, Daniel O

    2016-08-01

    The divisome is the macromolecular complex that carries out cell division in Escherichia coli. Every generation it must be assembled, and then disassembled so that the sequestered proteins can be recycled. Whilst the assembly process has been well studied, virtually nothing is known about the disassembly process. In this study, we have used super-resolution SIM imaging to monitor pairs of fluorescently tagged divisome proteins as they depart from the division septum. These simple binary comparisons indicated that disassembly occurs in a coordinated process that consists of at least five steps: [FtsZ, ZapA] ⇒ [ZipA, FtsA] ⇒ [FtsL, FtsQ] ⇒ [FtsI, FtsN] ⇒ [FtsN]. This sequence of events is remarkably similar to the assembly process, indicating that disassembly follows a first-in, first-out principle. A secondary observation from these binary comparisons was that FtsZ and FtsN formed division rings that were spatially separated throughout the division process. Thus the data indicate that the divisome structure can be visualized as two concentric rings; a proto-ring containing FtsZ and an FtsN-ring. PMID:27096604

  18. Easily disassembled electrical connector for high voltage, high frequency connections

    DOEpatents

    Milner, J.R.

    1994-05-10

    An easily accessible electrical connector capable of rapid assembly and disassembly is described wherein a wide metal conductor sheet may be evenly contacted over the entire width of the conductor sheet by opposing surfaces on the connector which provide an even clamping pressure against opposite surfaces of the metal conductor sheet using a single threaded actuating screw. 13 figures.

  19. Easily disassembled electrical connector for high voltage, high frequency connections

    DOEpatents

    Milner, Joseph R.

    1994-01-01

    An easily accessible electrical connector capable of rapid assembly and disassembly wherein a wide metal conductor sheet may be evenly contacted over the entire width of the conductor sheet by opposing surfaces on the connector which provide an even clamping pressure against opposite surfaces of the metal conductor sheet using a single threaded actuating screw.

  20. Teaching Assembly for Disassembly; An Under-Graduate Module Experience

    ERIC Educational Resources Information Center

    Alexandri, Eleftheria

    2014-01-01

    This paper is about the experience of teaching Assembly for Disassembly to fourth year architect students within the module of sustainable design. When designing a sustainable building one should take into consideration the fact that the building is going to be demolished in some years; thus the materials should be assembled in such a way so that…

  1. Desmosome Assembly and Disassembly Are Membrane Raft-Dependent

    PubMed Central

    Faundez, Victor; Koval, Michael; Mattheyses, Alexa L.; Kowalczyk, Andrew P.

    2014-01-01

    Strong intercellular adhesion is critical for tissues that experience mechanical stress, such as the skin and heart. Desmosomes provide adhesive strength to tissues by anchoring desmosomal cadherins of neighboring cells to the intermediate filament cytoskeleton. Alterations in assembly and disassembly compromise desmosome function and may contribute to human diseases, such as the autoimmune skin blistering disease pemphigus vulgaris (PV). We previously demonstrated that PV auto-antibodies directed against the desmosomal cadherin desmoglein 3 (Dsg3) cause loss of adhesion by triggering membrane raft-mediated Dsg3 endocytosis. We hypothesized that raft membrane microdomains play a broader role in desmosome homeostasis by regulating the dynamics of desmosome assembly and disassembly. In human keratinocytes, Dsg3 is raft associated as determined by biochemical and super resolution immunofluorescence microscopy methods. Cholesterol depletion, which disrupts rafts, prevented desmosome assembly and adhesion, thus functionally linking rafts to desmosome formation. Interestingly, Dsg3 did not associate with rafts in cells lacking desmosomal proteins. Additionally, PV IgG-induced desmosome disassembly occurred by redistribution of Dsg3 into raft-containing endocytic membrane domains, resulting in cholesterol-dependent loss of adhesion. These findings demonstrate that membrane rafts are required for desmosome assembly and disassembly dynamics, suggesting therapeutic potential for raft targeting agents in desmosomal diseases such as PV. PMID:24498201

  2. Assembly via disassembly: A case in machine perceptual development

    NASA Technical Reports Server (NTRS)

    Bajcsy, Ruzena K.; Tsikos, Constantine J.

    1989-01-01

    First results in the effort of learning about representations of objects is presented. The questions attempted to be answered are: What is innate and what must be derived from the environment. The problem is casted in the framework of disassembly of an object into two parts.

  3. Multi-kanban mechanism for personal computer disassembly

    NASA Astrophysics Data System (ADS)

    Udomsawat, Gun; Gupta, Surendra M.; Kamarthi, Sagar V.

    2004-12-01

    The use of personal computers (PCs) continues to increase every year. According to a 1999 figure, 50 percent of all US households owned PCs, a figure that continues to rise every year. With continuous development of sophisticated software, PCs are becoming increasingly powerful. In addition, the price of a PC continues to steadily decline. Furthermore, the typical life of a PC in the workplace is approximately two to three years while in the home it is three to five years. As these PCs become obsolete, they are replaced and the old PCs are disposed of. It is estimated that between 14 and 20 million PCs are retired annually in the US. While 20 to 30% of the units may be resold, the others are discarded. These discards represent a significant potential source of lead for the waste stream. In some communities, waste cathode ray tubes (CRTs) represent the second largest source of lead in the waste stream after vehicular lead acid batteries. PCs are, therefore, not suitable for dumping in landfills. Besides, several components of a PC can be reused and then there are other valuable materials that can also be harvested. And with the advent of product stewardship, product recovery is the best solution for manufacturers. Disassembly line is perhaps the most suitable set up for disassembling PCs. However, planning and scheduling of disassembly on a disassembly line is complicated. In this paper, we discuss some of the complications including product arrival, demand arrival, inventory fluctuation and production control mechanisms. We then show how to overcome them by implementing a multi-kanban mechanism in the PC disassembly line setting. The multi-kanban mechanism relies on dynamic routing of kanbans according to the state of the system. We investigate the multi-kanban mechanism using simulation and demonstrate that this mechanism is superior to the traditional push system in terms of controlling the system"s inventory while maintaining a decent customer service level.

  4. Distinct stages in stress granule assembly and disassembly.

    PubMed

    Wheeler, Joshua R; Matheny, Tyler; Jain, Saumya; Abrisch, Robert; Parker, Roy

    2016-01-01

    Stress granules are non-membrane bound RNA-protein (RNP) assemblies that form when translation initiation is limited and contain a biphasic structure with stable core structures surrounded by a less concentrated shell. The order of assembly and disassembly of these two structures remains unknown. Time course analysis of granule assembly suggests that core formation is an early event in granule assembly. Stress granule disassembly is also a stepwise process with shell dissipation followed by core clearance. Perturbations that alter liquid-liquid phase separations (LLPS) driven by intrinsically disordered protein regions (IDR) of RNA binding proteins in vitro have the opposite effect on stress granule assembly in vivo. Taken together, these observations argue that stress granules assemble through a multistep process initiated by stable assembly of untranslated mRNPs into core structures, which could provide sufficient high local concentrations to allow for a localized LLPS driven by IDRs on RNA binding proteins. PMID:27602576

  5. Meiotic Clade AAA ATPases: Protein Polymer Disassembly Machines.

    PubMed

    Monroe, Nicole; Hill, Christopher P

    2016-05-01

    Meiotic clade AAA ATPases (ATPases associated with diverse cellular activities), which were initially grouped on the basis of phylogenetic classification of their AAA ATPase cassette, include four relatively well characterized family members, Vps4, spastin, katanin and fidgetin. These enzymes all function to disassemble specific polymeric protein structures, with Vps4 disassembling the ESCRT-III polymers that are central to the many membrane-remodeling activities of the ESCRT (endosomal sorting complexes required for transport) pathway and spastin, katanin p60 and fidgetin affecting multiple aspects of cellular dynamics by severing microtubules. They share a common domain architecture that features an N-terminal MIT (microtubule interacting and trafficking) domain followed by a single AAA ATPase cassette. Meiotic clade AAA ATPases function as hexamers that can cycle between the active assembly and inactive monomers/dimers in a regulated process, and they appear to disassemble their polymeric substrates by translocating subunits through the central pore of their hexameric ring. Recent studies with Vps4 have shown that nucleotide-induced asymmetry is a requirement for substrate binding to the pore loops and that recruitment to the protein lattice via MIT domains also relieves autoinhibition and primes the AAA ATPase cassettes for substrate binding. The most striking, unifying feature of meiotic clade AAA ATPases may be their MIT domain, which is a module that is found in a wide variety of proteins that localize to ESCRT-III polymers. Spastin also displays an adjacent microtubule binding sequence, and the presence of both ESCRT-III and microtubule binding elements may underlie the recent findings that the ESCRT-III disassembly function of Vps4 and the microtubule-severing function of spastin, as well as potentially katanin and fidgetin, are highly coordinated. PMID:26555750

  6. Programmable, isothermal disassembly of DNA-linked colloidal particles

    NASA Astrophysics Data System (ADS)

    Tison, Christopher Kirby

    Colloidal particles serve as useful building blocks for materials applications ranging from controlled hand-gap materials to rationally designed drug delivery systems. Thus, developing approaches to direct the assembly and disassembly of sub-micron sized particles will be paramount to further advances in materials science engineering. This project focuses on using programmable and reversible binding between oligonucleotide strands to assemble and then disassemble polystyrene colloidal particles. It is shown that DNA-mediated assembly can be reversed at a fixed temperature using secondary oligonucleotide strands to competitively displace the primary strands linking particles together. It was found that (1) titrating the surface density of hybridizing probe strands and (2) adjusting the base length difference between primary and secondary target strands was key to successful isothermal disassembly. In order to titrate the surface density of primary probe-target duplexes, colloidal particles were conjugated with mixtures of probe strands and "diluent" strands in order to minimize the number of DNA linkages between particles. To reduce the steric interference of the diluent strands to hybridization events, diluent strands were clipped with a restriction enzyme in select cases. Kinetics studies revealed that a four to six base-length difference between primary and secondary target strands resulted in extensive competitive hybridization at secondary oligonucleotide concentrations as low as 10 nM. Importantly, it was found that the timing for release of either DNA alone or DNA-conjugated nanoparticles could be tuned through choices in the DNA sequences and concentration. Lastly, competitive hybridization was explored in select studies to drive the "shedding" of PEGylated DNA targets from microspheres to reveal underlying adhesive groups or ligands on the particle surface. Unlike prior work relying on elevated temperatures to melt DNA-linkages, this work presents an

  7. Gelsolin mediates calcium-dependent disassembly of Listeria actin tails

    PubMed Central

    Larson, Laura; Arnaudeau, Serge; Gibson, Bruce; Li, Wei; Krause, Ryoko; Hao, Binghua; Bamburg, James R.; Lew, Daniel P.; Demaurex, Nicolas; Southwick, Frederick

    2005-01-01

    The role of intracellular Ca2+ in the regulation of actin filament assembly and disassembly has not been clearly defined. We show that reduction of intracellular free Ca2+ concentration ([Ca2+]i) to <40 nM in Listeria monocytogenes-infected, EGFP–actin-transfected Madin–Darby canine kidney cells results in a 3-fold lengthening of actin filament tails. This increase in tail length is the consequence of marked slowing of the actin filament disassembly rate, without a significant change in assembly rate. The Ca2+-sensitive actin-severing protein gelsolin concentrates in the Listeria rocket tails at normal resting [Ca2+]i and disassociates from the tails when [Ca2+]i is lowered. Reduction in [Ca2+]i also blocks the severing activity of gelsolin, but not actin-depolymerizing factor (ADF)/cofilin microinjected into Listeria-infected cells. In Xenopus extracts, Listeria tail lengths are also calcium-sensitive, markedly shortening on addition of calcium. Immunodepletion of gelsolin, but not Xenopus ADF/cofilin, eliminates calcium-sensitive actin-filament shortening. Listeria tail length is also calcium-insensitive in gelsolin-null mouse embryo fibroblasts. We conclude that gelsolin is the primary Ca2+-sensitive actin filament recycling protein in the cell and is capable of enhancing Listeria actin tail disassembly at normal resting [Ca2+]i (145 nM). These experiments illustrate the unique and complementary functions of gelsolin and ADF/cofilin in the recycling of actin filaments. PMID:15671163

  8. (HFR-B1 experiment reporting and capsule disassembly)

    SciTech Connect

    Myers, B.F.

    1991-02-22

    The traveler visited the Joint Research Centre (JRC), Petten, The Netherlands, the Forschungszentrum GmbH (KFA), Juelich, Germany; and the Zentralinstitut fuer Kernforschung (ZfK), Rossendorf, Germany, during the period January 28 through February 9. At JRC, the analysis of the experiment HFR-B1 was discussed; a new schedule for issuance of the final data report was established. Other discussions at JRC concerned the capabilities of Petten to conduct two reactor experiments being proposed under the US/FRG cooperative program and the initial results of a proof test of Germany fuel spheres. At KFA, the main emphasis was on the disassembly of capsules 2 and 3 of the HFR-B1 experiment and agreement on the examinations and tests to be conducted with the disassembled components. The disassembly of capsule 3 was observed. Extensive discussions were conducted on the work, both experimental and analytical, being conducted in the Institut fuer Sicherheitsforschung und Reaktor Technologie. A major portion of the experimental work is being conducted at ZfK and a visit to this laboratory, sponosored by the KFA, was made on February 6 and 7. Cooperation with the US on the experimental and analytical work in the safety area was strongly emphasized. 1 tab.

  9. On the optimal design of the disassembly and recovery processes

    SciTech Connect

    Xanthopoulos, A.; Iakovou, E.

    2009-05-15

    This paper tackles the problem of the optimal design of the recovery processes of the end-of-life (EOL) electric and electronic products, with a special focus on the disassembly issues. The objective is to recover as much ecological and economic value as possible, and to reduce the overall produced quantities of waste. In this context, a medium-range tactical problem is defined and a novel two-phased algorithm is presented for a remanufacturing-driven reverse supply chain. In the first phase, we propose a multicriteria/goal-programming analysis for the identification and the optimal selection of the most 'desirable' subassemblies and components to be disassembled for recovery, from a set of different types of EOL products. In the second phase, a multi-product, multi-period mixed-integer linear programming (MILP) model is presented, which addresses the optimization of the recovery processes, while taking into account explicitly the lead times of the disassembly and recovery processes. Moreover, a simulation-based solution approach is proposed for capturing the uncertainties in reverse logistics. The overall approach leads to an easy-to-use methodology that could support effectively middle level management decisions. Finally, the applicability of the developed methodology is illustrated by its application on a specific case study.

  10. Disassembly of the cystovirus ϕ6 envelope by montmorillonite clay.

    PubMed

    Block, Karin A; Trusiak, Adrianna; Katz, Al; Gottlieb, Paul; Alimova, Alexandra; Wei, Hui; Morales, Jorge; Rice, William J; Steiner, Jeffrey C

    2014-02-01

    Prior studies of clay-virus interactions have focused on the stability and infectivity of nonenveloped viruses, yielding contradictory results. We hypothesize that the surface charge distribution of the clay and virus envelope dictates how the components react and affect aggregation, viral stability, and infectivity. The bacteriophage Cystoviridae species φ6 used in this study is a good model for enveloped pathogens. The interaction between φ6 and montmorillonite (MMT) clay (the primary component of bentonite) is explored by transmission electron microscopy. The analyses show that MMT-φ6 mixtures undergo heteroaggregation, forming structures in which virtually all the virions are either sequestered between MMT platelet layers or attached to platelet edges. The virions swell and undergo disassembly resulting in partial or total envelope loss. Edge-attached viral envelopes distort to increase contact area with the positively charged platelet edges indicating that the virion surface is negatively charged. The nucleocapsid (NCs) remaining after envelope removal also exhibit distortion, in contrast to detergent-produced NCs which exhibit no distortion. This visually discernible disassembly is a mechanism for loss of infectivity previously unreported by studies of nonenveloped viruses. The MMT-mediated sequestration and disassembly result in reduced infectivity, suggesting that clays may reduce infectivity of enveloped pathogenic viruses in soils and sediments. PMID:24357622

  11. On the optimal design of the disassembly and recovery processes.

    PubMed

    Xanthopoulos, A; Iakovou, E

    2009-05-01

    This paper tackles the problem of the optimal design of the recovery processes of the end-of-life (EOL) electric and electronic products, with a special focus on the disassembly issues. The objective is to recover as much ecological and economic value as possible, and to reduce the overall produced quantities of waste. In this context, a medium-range tactical problem is defined and a novel two-phased algorithm is presented for a remanufacturing-driven reverse supply chain. In the first phase, we propose a multicriteria/goal-programming analysis for the identification and the optimal selection of the most 'desirable' subassemblies and components to be disassembled for recovery, from a set of different types of EOL products. In the second phase, a multi-product, multi-period mixed-integer linear programming (MILP) model is presented, which addresses the optimization of the recovery processes, while taking into account explicitly the lead times of the disassembly and recovery processes. Moreover, a simulation-based solution approach is proposed for capturing the uncertainties in reverse logistics. The overall approach leads to an easy-to-use methodology that could support effectively middle level management decisions. Finally, the applicability of the developed methodology is illustrated by its application on a specific case study. PMID:19138507

  12. Regulation of cilia assembly, disassembly, and length by protein phosphorylation.

    PubMed

    Cao, Muqing; Li, Guihua; Pan, Junmin

    2009-01-01

    The exact mechanism by which cells are able to assemble, regulate, and disassemble cilia or flagella is not yet completely understood. Recent studies in several model systems, including Chlamydomonas, Tetrahymena, Leishmania, Caenorhabditis elegans, and mammals, provide increasing biochemical and genetic evidence that phosphorylation of multiple protein kinases plays a key role in cilia assembly, disassembly, and length regulation. Members of several protein kinase families--including aurora kinases, never in mitosis A (NIMA)-related protein kinases, mitogen-activated protein (MAP) kinases, and a novel cyclin-dependent protein kinase--are involved in the ciliary regulation process. Among the newly identified protein kinase substrates are Chlamydomonas kinesin-13 (CrKinesin13), a microtubule depolymerizer, and histone deacetylase 6 (HDAC6), a microtubule deacetylase. Chlamydomonas aurora/Ipl1p-like protein kinase (CALK) and CrKinesin13 are two proteins that undergo phosphorylation changes correlated with flagellar assembly or disassembly. CALK becomes phosphorylated when flagella are lost, whereas CrKinesin13 is phosphorylated when new flagella are assembled. Conversely, suppressing CrKinesin13 expression results in cells with shorter flagella. PMID:20362099

  13. Disassembly of the cystovirus ϕ6 envelope by montmorillonite clay

    PubMed Central

    Block, Karin A; Trusiak, Adrianna; Katz, Al; Gottlieb, Paul; Alimova, Alexandra; Wei, Hui; Morales, Jorge; Rice, William J; Steiner, Jeffrey C

    2014-01-01

    Prior studies of clay–virus interactions have focused on the stability and infectivity of nonenveloped viruses, yielding contradictory results. We hypothesize that the surface charge distribution of the clay and virus envelope dictates how the components react and affect aggregation, viral stability, and infectivity. The bacteriophage Cystoviridae species φ6 used in this study is a good model for enveloped pathogens. The interaction between φ6 and montmorillonite (MMT) clay (the primary component of bentonite) is explored by transmission electron microscopy. The analyses show that MMT–φ6 mixtures undergo heteroaggregation, forming structures in which virtually all the virions are either sequestered between MMT platelet layers or attached to platelet edges. The virions swell and undergo disassembly resulting in partial or total envelope loss. Edge-attached viral envelopes distort to increase contact area with the positively charged platelet edges indicating that the virion surface is negatively charged. The nucleocapsid (NCs) remaining after envelope removal also exhibit distortion, in contrast to detergent-produced NCs which exhibit no distortion. This visually discernible disassembly is a mechanism for loss of infectivity previously unreported by studies of nonenveloped viruses. The MMT-mediated sequestration and disassembly result in reduced infectivity, suggesting that clays may reduce infectivity of enveloped pathogenic viruses in soils and sediments. PMID:24357622

  14. Nicotinic acid modulates intracellular calcium concentration and disassembles the cytoskeleton

    PubMed Central

    LI, JIEJING; LI, YANXI; ZHANG, PENGHUI; NIU, HUA; SHI, YU

    2014-01-01

    Nicotinic acid (NA), a member of the vitamin B family, is well known for its functions in the treatment and prevention of atherosclerosis due to decreasing plasma levels of low-density lipoprotein cholesterol. In recent years, the major side effect of NA, cutaneous flushing, has also attracted extensive attention. However, the effects of NA in other aspects of physiology or cell biology have remained elusive. The present study provided evidence that high concentrations of NA were able to first reduce and later elevate intracellular [Ca2+] in the NIH3T3 cell line. The reduction of the intracellular Ca2+ concentration was achieved within the initial 10 sec, and was preceded by a gradual elevation of intracellular [Ca2+]. Notably, marked accumulation of opaque materials in the perinuclear region was observed in NIH3T3 cells treated with 70 mM NA. Further analysis revealed that treatment with 70 mM NA for 1 h disassembled the microtubule and F-actin cytoskeleton systems and resulted in β-tubulin degradation in an ubiquitin-proteasome-dependent manner. These data indicated that high concentrations of NA disrupted cytoskeleton structures, which may have contributed to minus end (nucleus region) to plus end (cell membrane region)-directed transport processes and resulted in the deposition of material in the perinuclear region. Artificially increasing [Ca2+] adding CaCl2 to the culture media effected the disassembly of F-actin, while it had no apparent effect on microtubules. These results suggested that the disruption of the cytoskeleton systems was not entirely due to the NA-induced elevation of [Ca2+]. Finally, microinjection of NA into xenopus embryos blocked the transport of melanosomes to the peripheral cellular area. In conclusion, the present study indicated that NA disassembles F-actin and microtubule systems, thereby blocking cytoskeleton-dependent intracellular transport. PMID:25241762

  15. Nicotinic acid modulates intracellular calcium concentration and disassembles the cytoskeleton.

    PubMed

    Li, Jiejing; Li, Yanxi; Zhang, Penghui; Niu, Hua; Shi, Yu

    2014-12-01

    Nicotinic acid (NA), a member of the vitamin B family, is well known for its functions in the treatment and prevention of atherosclerosis due to decreasing plasma levels of low-density lipoprotein cholesterol. In recent years, the major side effect of NA, cutaneous flushing, has also attracted extensive attention. However, the effects of NA in other aspects of physiology or cell biology have remained elusive. The present study provided evidence that high concentrations of NA were able to first reduce and later elevate intracellular [Ca2+] in the NIH3T3 cell line. The reduction of the intracellular Ca2+ concentration was achieved within the initial 10 sec, and was preceded by a gradual elevation of intracellular [Ca2+]. Notably, marked accumulation of opaque materials in the perinuclear region was observed in NIH3T3 cells treated with 70 mM NA. Further analysis revealed that treatment with 70 mM NA for 1 h disassembled the microtubule and F‑actin cytoskeleton systems and resulted in β‑tubulin degradation in an ubiquitin‑proteasome-dependent manner. These data indicated that high concentrations of NA disrupted cytoskeleton structures, which may have contributed to minus end (nucleus region) to plus end (cell membrane region)-directed transport processes and resulted in the deposition of material in the perinuclear region. Artificially increasing [Ca2+] adding CaCl2 to the culture media effected the disassembly of F‑actin, while it had no apparent effect on microtubules. These results suggested that the disruption of the cytoskeleton systems was not entirely due to the NA-induced elevation of [Ca2+]. Finally, microinjection of NA into xenopus embryos blocked the transport of melanosomes to the peripheral cellular area. In conclusion, the present study indicated that NA disassembles F‑actin and microtubule systems, thereby blocking cytoskeleton-dependent intracellular transport. PMID:25241762

  16. Amide I band and photoinduced disassembly of a peptide hydrogel

    NASA Astrophysics Data System (ADS)

    Measey, Thomas J.; Markiewicz, Beatrice N.; Gai, Feng

    2013-08-01

    Peptide hydrogels are promising candidates for a wide range of medical and biotechnological applications. To further expand the potential utility of peptide hydrogels, herein we demonstrate a simple yet effective strategy to render peptide hydrogels photodegradable, making controlled disassembly of the gel structure of interest feasible. In addition, we find that the high-frequency amide I' component (i.e., the peak at ˜1685 cm-1) of the photodegradable peptide hydrogel studied shows an unusually large enhancement, in comparison to that of other peptide fibrils consisting of antiparallel β-sheets, making it a good model system for further study of the coupling-structure relationship.

  17. Distinct stages in stress granule assembly and disassembly

    PubMed Central

    Wheeler, Joshua R; Matheny, Tyler; Jain, Saumya; Abrisch, Robert; Parker, Roy

    2016-01-01

    Stress granules are non-membrane bound RNA-protein (RNP) assemblies that form when translation initiation is limited and contain a biphasic structure with stable core structures surrounded by a less concentrated shell. The order of assembly and disassembly of these two structures remains unknown. Time course analysis of granule assembly suggests that core formation is an early event in granule assembly. Stress granule disassembly is also a stepwise process with shell dissipation followed by core clearance. Perturbations that alter liquid-liquid phase separations (LLPS) driven by intrinsically disordered protein regions (IDR) of RNA binding proteins in vitro have the opposite effect on stress granule assembly in vivo. Taken together, these observations argue that stress granules assemble through a multistep process initiated by stable assembly of untranslated mRNPs into core structures, which could provide sufficient high local concentrations to allow for a localized LLPS driven by IDRs on RNA binding proteins. DOI: http://dx.doi.org/10.7554/eLife.18413.001 PMID:27602576

  18. A products generator for testing the performance of disassembly procedures

    NASA Astrophysics Data System (ADS)

    Adenso-Díaz, Belarmino; González Torre, Beatriz

    2004-12-01

    In recent decades, regulations and markets have been exerting pressure on designers and manufacturers to take more responsibility for the environmental impacts of their products throughout their life cycles. The problem of finding the disassembly sequence represents one of the major challenges when attempting to close product life cycles by carrying out reuse, recycling and remanufacturing practices. Many different techniques have been used to deal with this problem, varying from exact to heuristic solutions. So far, however, not much effort has gone into measuring and comparing the efficiency of this wide set of techniques. This is partly due to the difficulties of getting a wide population of real products, belonging to different industries and with different degree of complexity that might constitute a representative population for carrying out this kind of task. In this paper, a generator of complex products is presented that is able to build up products with hundreds of components joined by different kinds of joints in such a way that a theoretical "good" disassembly sequence is always known. The efficiency of different methods for general products can thus be easily compared. The performance of a Scatter Search algorithm is tested as an example of its application in this case.

  19. Hybrid LCA of a design for disassembly technology: active disassembling fasteners of hydrogen storage alloys for home appliances.

    PubMed

    Nakamura, Shinichiro; Yamasue, Eiji

    2010-06-15

    In the current recycling system of end-of-life (EoL) appliances, which is based on shredding, alloying elements tend to end up in the scrap of base metals. The uncontrolled mixing of alloying elements contaminates secondary metals and calls for dilution with primary metals. Active disassembling fastener (ADF) is a design for disassembly (DfD) technology that is expected to solve this problem by significantly reducing the extent of mixing. This paper deals with a life cycle assessment (LCA) based on the waste input-output (WIO) model of an ADF developed using hydrogen storage alloys. Special attention is paid to the issue of dilution of mixed iron scrap using pig iron in an electric arc furnace (EAF). The results for Japanese electrical and electronic appliances indicate superiority of the recycling system based on the ADF over the current system in terms of reduced emissions of CO(2). The superiority of ADF was found to increase with an increase in the requirement for dilution of scrap. PMID:20476783

  20. The Relative Pedagogical Value of Disassemble/Analyze/Assemble (DAA) Activities

    ERIC Educational Resources Information Center

    Dalrymple, Odesma; Sears, David A.; Evangelou, Demetra

    2013-01-01

    Inherently a discovery-based pedagogy, Disassemble/Analyze/Assemble (DAA) activities start with the artefact--an instance of a typically well-engineered solution. Through systemized disassembly and the subsequent analysis of components, students engage in an iterative process of observation and follow-up probing. In-turn, this process helps…

  1. Nucleocytoplasmic transport in the midzone membrane domain controls yeast mitotic spindle disassembly

    PubMed Central

    Lucena, Rafael; Dephoure, Noah; Gygi, Steve P.; Kellogg, Douglas R.; Tallada, Victor A.

    2015-01-01

    During each cell cycle, the mitotic spindle is efficiently assembled to achieve chromosome segregation and then rapidly disassembled as cells enter cytokinesis. Although much has been learned about assembly, how spindles disassemble at the end of mitosis remains unclear. Here we demonstrate that nucleocytoplasmic transport at the membrane domain surrounding the mitotic spindle midzone, here named the midzone membrane domain (MMD), is essential for spindle disassembly in Schizosaccharomyces pombe cells. We show that, during anaphase B, Imp1-mediated transport of the AAA-ATPase Cdc48 protein at the MMD allows this disassembly factor to localize at the spindle midzone, thereby promoting spindle midzone dissolution. Our findings illustrate how a separate membrane compartment supports spindle disassembly in the closed mitosis of fission yeast. PMID:25963819

  2. Large fluctuations in the disassembly rate of microtubules revealed by atomic force microscopy.

    PubMed

    Thomson, Neil H; Kasas, Sandor; Riederer, Beat M; Catsicas, Stefan; Dietler, Giovanni; Kulik, Andrzej J; Forró, László

    2003-01-01

    Atomic force microscopy (AFM) in situ has been used to observe the cold disassembly dynamics of microtubules at a previously unrealised spatial resolution. Microtubules either electrostatically or covalently bound to aminosilane surfaces disassembled at room temperature under buffer solutions with no free tubulin present. This process was followed by taking sequential tapping-mode AFM images and measuring the change in the microtubule end position as a function of time, with an spatial accuracy down to +/-20nm and a temporal accuracy of +/-1s. As well as giving average disassembly rates on the order of 1-10 tubulin monomers per second, large fluctuations in the disassembly rate were revealed, indicating that the process is far from smooth and linear under these experimental conditions. The surface bound rates measured here are comparable to the rates for GMPCPP-tubulin microtubules free in solution, suggesting that inhibition of tubulin curvature through steric hindrance controls the average, relatively low disassembly rate. The large fluctuations in this rate are thought to be due to multiple pathways in the kinetics of disassembly with differing rate constants and/or stalling due to defects in the microtubule lattice. Microtubules that were covalently bound to the surface left behind the protofilaments covalently cross-linked to the aminosilane via glutaraldehyde during the disassembly process. Further work is needed to quantitatively assess the effects of surface binding on protofibril disassembly rates, reveal any differences in disassembly rates between the plus and minus ends and to enable assembly as well as disassembly to be imaged in the microscope fluid cell in real-time. PMID:12801676

  3. Manipulating Assembly, Disassembly and Exchange in Responsive Polyelectrolyte Multilayers

    NASA Astrophysics Data System (ADS)

    Hammond, Paula

    2008-03-01

    Polyelectrolyte multilayer assembly is based on the alternating adsorption of multilvalent positively and negatively charged species to create ionically crosslinked thin films with nanoscale control of film composition and function. We have utilized this method of assembly to manipulate ion transport, molecular transport, and electrochemical transport in these films, enabling the generation of a range of organic and organic-inorganic devices. Biological materials applications are also derived from such films, enabling their use as drug delivery devices. In each of these applications, it is desired to control interdiffusion and exchange within the multilayer systems to maintain desired function and generate isolated regions of composition and function within the z-direction of the film. Here we address these applications and means of controlling this phenomenon. Furthermore, it is desirable to induce controlled means of disassembly of these multilayer thin films. We will address a number of approaches for achieving this, including hydrolytic degradation, hydrogen bond dissociation, and controlled deconstruction on electrochemical impulse.

  4. Disassembling and reintegration of large telescope primary mirror

    NASA Astrophysics Data System (ADS)

    Xu, Qi-rui; Fan, Bin; Zhang, Ming

    2014-09-01

    The success of the large telescope is largely linked to the excellent performance and reliability of the primary mirror. In order to maintain the quality of its reflective surface at the high expectations of astronomers, the primary mirror after almost two or three years of astronomical observations, needs to be removed and reinstalled for its cleaning and re-coating operation. There are a series of procedures such as the primary mirror cell dissembling from telescope, mirror handling, transportation, reintegration, alignment and so on. This paper will describe the experiences of disassembling and reintegration of large telescope primary mirror, taking a two meter grade primary mirror for example. As with all advanced and complex opto-mechanical systems, there has been the usual problems and trouble shooting.

  5. Dynamic Alterations to α-Actinin Accompanying Sarcomere Disassembly and Reassembly during Cardiomyocyte Mitosis

    PubMed Central

    Ali, Mohammad A. M.; Cho, Woo Jung; Lopez, Waleska; Schulz, Richard

    2015-01-01

    Although mammals are thought to lose their capacity to regenerate heart muscle shortly after birth, embryonic and neonatal cardiomyocytes in mammals are hyperplastic. During proliferation these cells need to selectively disassemble their myofibrils for successful cytokinesis. The mechanism of sarcomere disassembly is, however, not understood. To study this, we performed a series of immunofluorescence studies of multiple sarcomeric proteins in proliferating neonatal rat ventricular myocytes and correlated these observations with biochemical changes at different cell cycle stages. During myocyte mitosis, α-actinin and titin were disassembled as early as prometaphase. α-actinin (representing the sarcomeric Z-disk) disassembly precedes that of titin (M-line), suggesting that titin disassembly occurs secondary to the collapse of the Z-disk. Sarcomere disassembly was concurrent with the dissolution of the nuclear envelope. Inhibitors of several intracellular proteases could not block the disassembly of α-actinin or titin. There was a dramatic increase in both cytosolic (soluble) and sarcomeric α-actinin during mitosis, and cytosolic α-actinin exhibited decreased phosphorylation compared to sarcomeric α-actinin. Inhibition of cyclin-dependent kinase 1 (CDK1) induced the quick reassembly of the sarcomere. Sarcomere dis- and re-assembly in cardiomyocyte mitosis is CDK1-dependent and features dynamic differential post-translational modifications of sarcomeric and cytosolic α-actinin. PMID:26076379

  6. An environmentally friendly technology of disassembling electronic components from waste printed circuit boards.

    PubMed

    Wang, Jianbo; Guo, Jie; Xu, Zhenming

    2016-07-01

    Electronic components (ECs) disassembling from waste printed circuit boards (WPCBs) is the first and essential step in WPCBs recycling chain. Over the past decades, primitive methods like simply heating WPCBs on a coal-heated plate to melt solders are dominated in practice, causing serious environmental pollution and also putting a real threat to the human health. In order to solve this problem, in this article, an automatic system in pilot-scale for ECs disassembling from WPCBs is designed, manufactured, and investigated. This system contains two parts: ECs automatic disassembly and off-gas purification. Meanwhile, WPCBs from television (i.e., TV-WPCBs) and personal computer (i.e., PC-WPCBs) are used for disassembling tests, respectively. When the disassembling temperature, rotating speed, and incubation time are 265±5°C, 10rpm, and 8min, respectively, the solder can be completely removed from both TV-WPCBs and PC-WPCBs. No pollutant is discharged from this system. Finally, the disassembling procedures for ECs from both TV-WPCBs and PC-WPCBs are suggested to promote WPCBs disassembling in an environment-friendly way, without threaten the environment and human health. PMID:27026495

  7. Development of remote disassembly technology for liquid-metal reactor (LMR) fuel

    SciTech Connect

    Bradley, E.C.; Evans, J.H.; Metz, C.F. III; Weil, B.S.

    1990-01-01

    A major objective of the Consolidated Fuel Reprocessing Program (CFRP) is to develop equipment and demonstrate technology to reprocess fast breeder reactor fuel. Experimental work on fuel disassembly cutting methods began in the 1970s. High-power laser cutting was selected as the preferred cutting method for fuel disassembly. Remotely operated development equipment was designed, fabricated, installed, and tested at Oak Ridge National Laboratory (ORNL). Development testing included remote automatic operation, remote maintenance testing, and laser cutting process development. This paper summarizes the development work performed at ORNL on remote fuel disassembly. 2 refs., 1 fig.

  8. Letting Go of JuNK by Disassembly of Adhesive Complexes.

    PubMed

    Farley, Jonathan E; Freeman, Marc R

    2015-12-01

    Immature neural circuits form excessive synaptic connections that are later refined through pruning of exuberant branches. In this issue, Bornstein et al. identify a role for JNK signaling in selective axon elimination through disassembly of cell adhesion complexes. PMID:26637791

  9. A Thermodynamic Model of Microtubule Assembly and Disassembly

    PubMed Central

    Piette, Bernard M. A. G.; Liu, Junli; Peeters, Kasper; Smertenko, Andrei; Hawkins, Timothy; Deeks, Michael; Quinlan, Roy; Zakrzewski, Wojciech J.; Hussey, Patrick J.

    2009-01-01

    Microtubules are self-assembling polymers whose dynamics are essential for the normal function of cellular processes including chromosome separation and cytokinesis. Therefore understanding what factors effect microtubule growth is fundamental to our understanding of the control of microtubule based processes. An important factor that determines the status of a microtubule, whether it is growing or shrinking, is the length of the GTP tubulin microtubule cap. Here, we derive a Monte Carlo model of the assembly and disassembly of microtubules. We use thermodynamic laws to reduce the number of parameters of our model and, in particular, we take into account the contribution of water to the entropy of the system. We fit all parameters of the model from published experimental data using the GTP tubulin dimer attachment rate and the lateral and longitudinal binding energies of GTP and GDP tubulin dimers at both ends. Also we calculate and incorporate the GTP hydrolysis rate. We have applied our model and can mimic published experimental data, which formerly suggested a single layer GTP tubulin dimer microtubule cap, to show that these data demonstrate that the GTP cap can fluctuate and can be several microns long. PMID:19668378

  10. Metal Nanoparticle/Block Copolymer Composite Assembly and Disassembly.

    PubMed

    Li, Zihui; Sai, Hiroaki; Warren, Scott C; Kamperman, Marleen; Arora, Hitesh; Gruner, Sol M; Wiesner, Ulrich

    2009-01-01

    Ligand-stabilized platinum nanoparticles (Pt NPs) were self-assembled with poly(isoprene-block-dimethylaminoethyl methacrylate) (PI-b-PDMAEMA) block copolymers to generate organic-inorganic hybrid materials. High loadings of NPs in hybrids were achieved through usage of N,N-di-(2-(allyloxy)ethyl)-N-3-mercaptopropyl-N-3-methylammonium chloride as the ligand, which provided high solubility of NPs in various solvents as well as high affinity to PDMAEMA. From NP synthesis, existence of sub-1 nm Pt NPs was confirmed by high-angle annular dark field scanning transmission electron microscopy (HAADF-STEM) images. Estimations of the Pt NP ligand head group density based on HAADF-STEM images and thermogravimetric analysis (TGA) data yielded results comparable to what has been found for alkanethiol self-assembled monolayers (SAMs) on flat Pt {111} surfaces. Changing the volume fraction of Pt NPs in block copolymer-NP composites yielded hybrids with spherical micellar, wormlike micellar, lamellar and inverse hexagonal morphologies. Disassembly of hybrids with spherical, wormlike micellar, and lamellar morphologies generated isolated metal-NP based nano-spheres, cylinders and sheets, respectively. Results suggest the existence of powerful design criteria for the formation of metal-based nanostructures from designer blocked macromolecules. PMID:21103025

  11. Augmented stress fiber arrays after cytopharmacologic disassembly of microtubules

    SciTech Connect

    Godman, G.C.; Tannenbaum, J.; Brett, J.B.

    1986-03-01

    Disruption of microtubules (mt) of bovine aortic endothelial (BAE) cells, and normal and transformed fibroblasts, by exposure to 2.5 ..mu..M colchicine; 12 ..mu..M vinblastine; or 1 ..mu..M nocodazole, for 5 or 20 hrs results in aggregation of vimentin-intermediate filament (IF) and the development of markedly augmented stress fiber (SF) arrays. After disassembly of mt, confluent BAE, with circumferential marginal microfilament bands and few central SF, develop dense ribbon-like SF arrays, and spontaneously transformed fibroblasts (tHmf-e), which before treatment are apolar or epithelioid and have few or no SF, acquire extensive organized SF arrays. The axially oriented SF span the entire cell length and terminate in vinculin-containing adhesion plaques, polarizing these cells. The visible increase in SF associated actin is not accompanied by an increase either in actin synthesis (determined from electropherograms after pulse labeling with (/sup 35/S)methionine), or content (DNAse I assay for total cell actin). The reorganization of actin into SF and the development of vinculin adhesion plaques is independent of protein synthesis and occurs in the presence of cycloheximide (10 ..mu..g/ml). These results suggest a role for mt and IF in the regulation of the organizational state of the actin-based cytoskeleton.

  12. The effect of sudden server breakdown on the performance of a disassembly line

    NASA Astrophysics Data System (ADS)

    Udomsawat, Gun; Gupta, Surendra M.

    2005-11-01

    Product and material recovery relies on the disassembly process to separate target components or materials from the end-of-life (EOL) products. Disassembly line is especially effective when products in large quantity are disassembled. Unlike an assembly line, a disassembly line is more complex and is subjected to numerous uncertainties including stochastic and multi-level arrivals of component demands, stochastic arrival times for EOL products, and process interruption due to equipment failure. These factors seriously impair the control mechanism in the disassembly line. A common production control mechanism is the traditional push system (TPS). TPS responds to the aforementioned complications by carrying substantial amounts of inventories. An alternative control mechanism is a newly developed multi-kanban pull system (MKS) that relies on dynamic routing of kanbans, which tends to minimize the system's inventories while maintaining demand serviceability. In this paper we explore the impact of sudden breakdown of server on the performance of a disassembly line. We compare the overall performances of the TPS and MKS by considering two scenarios. We present the solution procedure and results for these cases.

  13. Nek2 activation of Kif24 ensures cilium disassembly during the cell cycle.

    PubMed

    Kim, Sehyun; Lee, Kwanwoo; Choi, Jung-Hwan; Ringstad, Niels; Dynlacht, Brian David

    2015-01-01

    Many proteins are known to promote ciliogenesis, but mechanisms that promote primary cilia disassembly before mitosis are largely unknown. Here we identify a mechanism that favours cilium disassembly and maintains the disassembled state. We show that co-localization of the S/G2 phase kinase, Nek2 and Kif24 triggers Kif24 phosphorylation, inhibiting cilia formation. We show that Kif24, a microtubule depolymerizing kinesin, is phosphorylated by Nek2, which stimulates its activity and prevents the outgrowth of cilia in proliferating cells, independent of Aurora A and HDAC6. Our data also suggest that cilium assembly and disassembly are in dynamic equilibrium, but Nek2 and Kif24 can shift the balance toward disassembly. Further, Nek2 and Kif24 are overexpressed in breast cancer cells, and ablation of these proteins restores ciliation in these cells, thereby reducing proliferation. Thus, Kif24 is a physiological substrate of Nek2, which regulates cilia disassembly through a concerted mechanism involving Kif24-mediated microtubule depolymerization. PMID:26290419

  14. Nek2 activation of Kif24 ensures cilium disassembly during the cell cycle

    PubMed Central

    Kim, Sehyun; Lee, Kwanwoo; Choi, Jung-Hwan; Ringstad, Niels; Dynlacht, Brian David

    2015-01-01

    Many proteins are known to promote ciliogenesis, but mechanisms that promote primary cilia disassembly before mitosis are largely unknown. Here we identify a mechanism that favours cilium disassembly and maintains the disassembled state. We show that co-localization of the S/G2 phase kinase, Nek2 and Kif24 triggers Kif24 phosphorylation, inhibiting cilia formation. We show that Kif24, a microtubule depolymerizing kinesin, is phosphorylated by Nek2, which stimulates its activity and prevents the outgrowth of cilia in proliferating cells, independent of Aurora A and HDAC6. Our data also suggest that cilium assembly and disassembly are in dynamic equilibrium, but Nek2 and Kif24 can shift the balance toward disassembly. Further, Nek2 and Kif24 are overexpressed in breast cancer cells, and ablation of these proteins restores ciliation in these cells, thereby reducing proliferation. Thus, Kif24 is a physiological substrate of Nek2, which regulates cilia disassembly through a concerted mechanism involving Kif24-mediated microtubule depolymerization. PMID:26290419

  15. Mucus barrier-triggered disassembly of siRNA nanocarriers

    NASA Astrophysics Data System (ADS)

    Thomsen, Troels B.; Li, Leon; Howard, Kenneth A.

    2014-10-01

    The mucus overlying mucosal epithelial surfaces presents not only a biological barrier to the penetration of potential pathogens, but also therapeutic modalities including RNAi-based nanocarriers. Movement of nanomedicines across the mucus barriers of the gastrointestinal mucosa is modulated by interactions of the nanomedicine carriers with mucin glycoproteins inside the mucus, potentiated by the large surface area of the nanocarrier. We have developed a fluorescence activation-based reporter system showing that the interaction between polyanionic mucins and the cationic chitosan/small interfering RNA (siRNA) nanocarriers (polyplexes) results in the disassembly and consequent triggered release of fluorescent siRNA. The quantity of release was found to be dependent on the molar ratio between chitosan amino groups and siRNA phosphate groups (NP ratio) of the polyplexes with a maximal estimated 48.6% release of siRNA over 30 min at NP 60. Furthermore, a microfluidic in vitro model of the gastrointestinal mucus barrier was used to visualize the dynamic interaction between chitosan/siRNA nanocarriers and native purified porcine stomach mucins. We observed strong interactions and aggregations at the mucin-liquid interface, followed by an NP ratio dependent release and consequent diffusion of siRNA across the mucin barrier. This work describes a new model of interaction at the nanocarrier-mucin interface and has important implications for the design and development of nucleic acid-based nanocarrier therapeutics for mucosal disease treatments and also provides insights into nanoscale pathogenic processes.The mucus overlying mucosal epithelial surfaces presents not only a biological barrier to the penetration of potential pathogens, but also therapeutic modalities including RNAi-based nanocarriers. Movement of nanomedicines across the mucus barriers of the gastrointestinal mucosa is modulated by interactions of the nanomedicine carriers with mucin glycoproteins inside the

  16. Coordinated Action of Nap1 and RSC in Disassembly of Tandem Nucleosomes.

    PubMed

    Prasad, Rashmi; D'Arcy, Sheena; Hada, Arjan; Luger, Karolin; Bartholomew, Blaine

    2016-09-01

    The SWI/SNF and RSC family of ATP-dependent chromatin remodelers disassembles nucleosomes by moving nucleosomes into the vicinity of adjoining nucleosomes. We found that the histone chaperone Nap1 efficiently promotes disassembly of adjacent nucleosomes with which RSC collides and not the disassembly of nucleosomes mobilized by RSC. Nap1 is specific to RSC, as it does not target SWI/SNF, its paralog in Saccharomyces cerevisiae Extensive mutational analysis of Nap1 has revealed that Nap1 affinity for histones H2A-H2B and H3-H4 and its ability to displace histones from DNA are required for Nap1 to enhance RSC-mediated disassembly. Other histone chaperones, such as Vps75, that also bind histones are not able to enhance RSC-mediated disassembly. Our study suggests a mechanism by which Nap1 is recruited to actively transcribed regions and assists in the passage of the transcription complex through chromatin, and it provides a novel mechanism for the coordinated action of RSC and Nap1. PMID:27273866

  17. The MAP kinase pathway coordinates crossover designation with disassembly of synaptonemal complex proteins during meiosis

    PubMed Central

    Nadarajan, Saravanapriah; Mohideen, Firaz; Tzur, Yonatan B; Ferrandiz, Nuria; Crawley, Oliver; Montoya, Alex; Faull, Peter; Snijders, Ambrosius P; Cutillas, Pedro R; Jambhekar, Ashwini; Blower, Michael D; Martinez-Perez, Enrique; Harper, J Wade; Colaiacovo, Monica P

    2016-01-01

    Asymmetric disassembly of the synaptonemal complex (SC) is crucial for proper meiotic chromosome segregation. However, the signaling mechanisms that directly regulate this process are poorly understood. Here we show that the mammalian Rho GEF homolog, ECT-2, functions through the conserved RAS/ERK MAP kinase signaling pathway in the C. elegans germline to regulate the disassembly of SC proteins. We find that SYP-2, a SC central region component, is a potential target for MPK-1-mediated phosphorylation and that constitutively phosphorylated SYP-2 impairs the disassembly of SC proteins from chromosomal domains referred to as the long arms of the bivalents. Inactivation of MAP kinase at late pachytene is critical for timely disassembly of the SC proteins from the long arms, and is dependent on the crossover (CO) promoting factors ZHP-3/RNF212/Zip3 and COSA-1/CNTD1. We propose that the conserved MAP kinase pathway coordinates CO designation with the disassembly of SC proteins to ensure accurate chromosome segregation. DOI: http://dx.doi.org/10.7554/eLife.12039.001 PMID:26920220

  18. akirin is required for diakinesis bivalent structure and synaptonemal complex disassembly at meiotic prophase I

    PubMed Central

    Clemons, Amy M.; Brockway, Heather M.; Yin, Yizhi; Kasinathan, Bhavatharini; Butterfield, Yaron S.; Jones, Steven J. M.; Colaiácovo, Monica P.; Smolikove, Sarit

    2013-01-01

    During meiosis, evolutionarily conserved mechanisms regulate chromosome remodeling, leading to the formation of a tight bivalent structure. This bivalent, a linked pair of homologous chromosomes, is essential for proper chromosome segregation in meiosis. The formation of a tight bivalent involves chromosome condensation and restructuring around the crossover. The synaptonemal complex (SC), which mediates homologous chromosome association before crossover formation, disassembles concurrently with increased condensation during bivalent remodeling. Both chromosome condensation and SC disassembly are likely critical steps in acquiring functional bivalent structure. The mechanisms controlling SC disassembly, however, remain unclear. Here we identify akir-1 as a gene involved in key events of meiotic prophase I in Caenorhabditis elegans. AKIR-1 is a protein conserved among metazoans that lacks any previously known function in meiosis. We show that akir-1 mutants exhibit severe meiotic defects in late prophase I, including improper disassembly of the SC and aberrant chromosome condensation, independently of the condensin complexes. These late-prophase defects then lead to aberrant reconfiguring of the bivalent. The meiotic divisions are delayed in akir-1 mutants and are accompanied by lagging chromosomes. Our analysis therefore provides evidence for an important role of proper SC disassembly in configuring a functional bivalent structure. PMID:23363597

  19. akirin is required for diakinesis bivalent structure and synaptonemal complex disassembly at meiotic prophase I.

    PubMed

    Clemons, Amy M; Brockway, Heather M; Yin, Yizhi; Kasinathan, Bhavatharini; Butterfield, Yaron S; Jones, Steven J M; Colaiácovo, Monica P; Smolikove, Sarit

    2013-04-01

    During meiosis, evolutionarily conserved mechanisms regulate chromosome remodeling, leading to the formation of a tight bivalent structure. This bivalent, a linked pair of homologous chromosomes, is essential for proper chromosome segregation in meiosis. The formation of a tight bivalent involves chromosome condensation and restructuring around the crossover. The synaptonemal complex (SC), which mediates homologous chromosome association before crossover formation, disassembles concurrently with increased condensation during bivalent remodeling. Both chromosome condensation and SC disassembly are likely critical steps in acquiring functional bivalent structure. The mechanisms controlling SC disassembly, however, remain unclear. Here we identify akir-1 as a gene involved in key events of meiotic prophase I in Caenorhabditis elegans. AKIR-1 is a protein conserved among metazoans that lacks any previously known function in meiosis. We show that akir-1 mutants exhibit severe meiotic defects in late prophase I, including improper disassembly of the SC and aberrant chromosome condensation, independently of the condensin complexes. These late-prophase defects then lead to aberrant reconfiguring of the bivalent. The meiotic divisions are delayed in akir-1 mutants and are accompanied by lagging chromosomes. Our analysis therefore provides evidence for an important role of proper SC disassembly in configuring a functional bivalent structure. PMID:23363597

  20. Single-Molecule Force Spectroscopy Study on the Mechanism of RNA Disassembly in Tobacco Mosaic Virus

    PubMed Central

    Liu, Ningning; Chen, Ying; Peng, Bo; Lin, Yuan; Wang, Qian; Su, Zhaohui; Zhang, Wenke; Li, Hongbin; Shen, Jiacong

    2013-01-01

    To explore the disassembly mechanism of tobacco mosaic virus (TMV), a model system for virus study, during infection, we have used single-molecule force spectroscopy to mimic and follow the process of RNA disassembly from the protein coat of TMV by the replisome (molecular motor) in vivo, under different pH and Ca2+ concentrations. Dynamic force spectroscopy revealed the unbinding free-energy landscapes as that at pH 4.7 the disassembly process is dominated by one free-energy barrier, whereas at pH 7.0 the process is dominated by one barrier and that there exists a second barrier. The additional free-energy barrier at longer distance has been attributed to the hindrance of disordered loops within the inner channel of TMV, and the biological function of those protein loops was discussed. The combination of pH increase and Ca2+ concentration drop could weaken RNA-protein interactions so much that the molecular motor replisome would be able to pull and disassemble the rest of the genetic RNA from the protein coat in vivo. All these facts provide supporting evidence at the single-molecule level, to our knowledge for the first time, for the cotranslational disassembly mechanism during TMV infection under physiological conditions. PMID:24359751

  1. Delivery of lipophilic bioactives: assembly, disassembly, and reassembly of lipid nanoparticles.

    PubMed

    Yao, Mingfei; Xiao, Hang; McClements, David Julian

    2014-01-01

    The oral bioavailability of lipophilic bioactive molecules can be greatly increased by encapsulating them within engineered lipid nanoparticles (ELNs), such as micelles, microemulsions, nanoemulsions, or solid lipid nanoparticles (SLNs). After ingestion, these ELNs are disassembled in the gastrointestinal tract (GIT) and then reassembled into biological lipid nanoparticles (mixed micelles) in the small intestine. These mixed micelles solubilize and transport lipophilic bioactive components to the epithelial cells. The mixed micelles are then disassembled and reassembled into yet another form of biological lipid nanoparticle [chylomicrons (CMs)] within the enterocyte cells. The CMs carry the bioactive components into the systemic (blood) circulation via the lymphatic system, thereby avoiding first-pass metabolism. This article provides an overview of the various physicochemical and physiological processes responsible for the assembly and disassembly of lipid nanoparticles outside and inside the GIT. This knowledge can be used to design food-grade delivery systems to improve the oral bioavailability of encapsulated lipophilic bioactive components. PMID:24328432

  2. Node-by-node disassembly of a mutualistic interaction web driven by species introductions

    PubMed Central

    Rodriguez-Cabal, Mariano A.; Barrios-Garcia, M. Noelia; Amico, Guillermo C.; Aizen, Marcelo A.; Sanders, Nathan J.

    2013-01-01

    Interaction webs summarize the diverse interactions among species in communities. The addition or loss of particular species and the alteration of key interactions can lead to the disassembly of the entire interaction web, although the nontrophic effects of species loss on interaction webs are poorly understood. We took advantage of ongoing invasions by a suite of exotic species to examine their impact in terms of the disassembly of an interaction web in Patagonia, Argentina. We found that the reduction of one species (a host of a keystone mistletoe species) resulted in diverse indirect effects that led to the disassembly of an interaction web through the loss of the mistletoe, two key seed-dispersers (a marsupial and a bird), and a pollinator (hummingbird). Our results demonstrate that the gains and losses of species are both consequences and drivers of global change that can lead to underappreciated cascading coextinctions through the disruption of mutualisms. PMID:24067653

  3. Assembly/Disassembly of DNA-Au Nanoparticles: A Strategy of Intervention

    DOE PAGESBeta

    Lim, I-Im S.; Wang, Lingyan; Chandrachud, Uma; Gal, Susannah; Zhong, Chuan-Jian

    2008-01-01

    This report describes the viability of a strategy for manipulating the assembly/disassembly processes of DNA-Au nanoparticles by molecular intervention. Using the temperature-induced assembly and disassembly processes of DNAs and gold nanoparticles as a model system, the introduction of a molecular recognition probe is demonstrated to lead to the intervention of the assembly/disassembly processes depending on its specific biorecognition. This process can be detected by monitoring the change in the optical properties of gold nanoparticles and their DNA assemblies. Implications of the preliminary results to exploration of the resulting nanostructures for fine-tuning of the interfacial reactivities in DNA-based bioassays and biomaterialmore » engineering are also discussed.« less

  4. Clathrin-coat disassembly illuminates the mechanisms of Hsp70 force generation.

    PubMed

    Sousa, Rui; Liao, Hsien-Shun; Cuéllar, Jorge; Jin, Suping; Valpuesta, José M; Jin, Albert J; Lafer, Eileen M

    2016-09-01

    Hsp70s use ATP hydrolysis to disrupt protein-protein associations and to move macromolecules. One example is the Hsc70- mediated disassembly of the clathrin coats that form on vesicles during endocytosis. Here, we exploited the exceptional features of these coats to test three models-Brownian ratchet, power-stroke and entropic pulling-proposed to explain how Hsp70s transform their substrates. Our data rule out the ratchet and power-stroke models and instead support a collision-pressure mechanism whereby collisions between clathrin-coat walls and Hsc70s drive coats apart. Collision pressure is the complement to the pulling force described in the entropic pulling model. We also found that self-association augments collision pressure, thereby allowing disassembly of clathrin lattices that have been predicted to be resistant to disassembly. These results illuminate how Hsp70s generate the forces that transform their substrates. PMID:27478930

  5. SWI/SNF has intrinsic nucleosome disassembly activity that is dependent on adjacent nucleosomes

    PubMed Central

    Dechassa, Mekonnen Lemma; Sabri, Abdellah; Pondugula, Santhi; Kassabov, Stefan R.; Chatterjee, Nilanjana; Kladde, Michael P.; Bartholomew, Blaine

    2010-01-01

    SUMMARY The ATP-dependent chromatin remodeling complex SWI/SNF regulates transcription and has been implicated in promoter nucleosome eviction. Efficient nucleosome disassembly by SWI/SNF alone in biochemical assays has however not been directly observed. Employing a model system of dinucleosomes rather than mononucleosomes, we demonstrate that remodeling leads to ordered and efficient disassembly of one of the two nucleosomes. An H2A/H2B dimer is first rapidly displaced and then in a slower reaction an entire histone octamer is lost. Nucleosome disassembly by SWI/SNF did not require additional factors such as chaperones or acceptors of histones. Observations in single molecules as well as bulk measurement suggest that a key intermediate in this process is one in which a nucleosome is moved towards the adjacent nucleosome. SWI/SNF recruited by the transcriptional activator Gal4-VP16 preferentially mobilizes the proximal nucleosome and destabilizes the adjacent nucleosome. PMID:20513433

  6. Disassembly properties and material characterisation of household small waste electric and electronic equipment.

    PubMed

    Bovea, María D; Pérez-Belis, Victoria; Ibáñez-Forés, Valeria; Quemades-Beltrán, Pilar

    2016-07-01

    This paper is focused on characterising small waste electric and electronic equipment, specifically small household appliances, from two different points of views: disassembly properties and material identification. The sample for this characterisation was obtained from a selective collection campaign organised in Castellón de la Plana (Spain). A total amount of 833.7kg (749 units) of small waste electric and electronic equipment was collected, of which 23.3% by weight and 22.4% by units belonged to the subcategory household equipment. This subcategory, composed of appliances such as vacuum cleaners, toasters, sandwich makers, hand blenders, juicers, coffee makers, hairdryers, scales, irons and heaters, was first disassembled in order to analyse different aspects of the disassembly process for each equipment type: type of joints, ease of identification of materials, ease of access to joints for extracting components, ease of separation of components from the whole, uniformity of tools needed for the disassembly process and possibility of reassembly after disassembly. Results show that the most common joints used in these equipment types are snap-fits and screws, although some permanent joints have also been identified. Next, the material composition of each component of each appliance belonging to each equipment type was identified visually and with additional mechanical trials and testing. It can be observed that plastic and electric/electronic components are present in all the equipment types analysed and are also the material fractions that appear with higher percentages in the material composition: 41.1wt% and 39.1wt% for the plastic fraction and electric/electronic components, respectively. The most common plastics are: polypropylene (PP), acrylonitrile butadiene styrene (ABS) and polycarbonate (PC), while the most common electric/electronic components are: cable, plug and printed circuit boards. Results also show that disassembly properties and material

  7. Disassembly of the fusion-1 capsule after irradiation in the BOR-60 reactor

    SciTech Connect

    Tsai, H.; Kazakov, V.A.; Chakin, V.P.

    1997-04-01

    A U.S./Russia (RF) collaborative irradiation experiment, Fusion-1, was completed in June 1996 after reaching a peak exposure of {approx}17 dpa in the BOR-60 fast reactor at the Research Institute of Atomic Reactors (RIAR) in Russia. The specimens were vanadium alloys, mainly of recent heats from both countries. In this reporting period, the capsule was disassembled at the RIAR hot cells and all test specimens were successfully retrieved. For the disassembly, an innovative method of using a heated diffusion oil to melt and separate the lithium bond from the test specimens was adopted. This method proved highly successful.

  8. 29 CFR 1926.1407 - Power line safety (up to 350 kV)-assembly and disassembly.

    Code of Federal Regulations, 2012 CFR

    2012-07-01

    ... Cranes and Derricks in Construction § 1926.1407 Power line safety (up to 350 kV)—assembly and disassembly...) Assembly/disassembly below power lines prohibited. No part of a crane/derrick, load line, or load... part of a crane/derrick, load line, or load (including rigging and lifting accessories),...

  9. 29 CFR 1926.1407 - Power line safety (up to 350 kV)-assembly and disassembly.

    Code of Federal Regulations, 2013 CFR

    2013-07-01

    ... Cranes and Derricks in Construction § 1926.1407 Power line safety (up to 350 kV)—assembly and disassembly...) Assembly/disassembly below power lines prohibited. No part of a crane/derrick, load line, or load... part of a crane/derrick, load line, or load (including rigging and lifting accessories),...

  10. 29 CFR 1926.1407 - Power line safety (up to 350 kV)-assembly and disassembly.

    Code of Federal Regulations, 2014 CFR

    2014-07-01

    ... Cranes and Derricks in Construction § 1926.1407 Power line safety (up to 350 kV)—assembly and disassembly...) Assembly/disassembly below power lines prohibited. No part of a crane/derrick, load line, or load... part of a crane/derrick, load line, or load (including rigging and lifting accessories),...

  11. 29 CFR 1926.1407 - Power line safety (up to 350 kV)-assembly and disassembly.

    Code of Federal Regulations, 2011 CFR

    2011-07-01

    ... Cranes and Derricks in Construction § 1926.1407 Power line safety (up to 350 kV)—assembly and disassembly...) Assembly/disassembly below power lines prohibited. No part of a crane/derrick, load line, or load... part of a crane/derrick, load line, or load (including rigging and lifting accessories),...

  12. 19 CFR 141.58 - Single entry for separately arriving portions of unassembled or disassembled entities.

    Code of Federal Regulations, 2012 CFR

    2012-04-01

    ... 19 Customs Duties 2 2012-04-01 2012-04-01 false Single entry for separately arriving portions of unassembled or disassembled entities. 141.58 Section 141.58 Customs Duties U.S. CUSTOMS AND BORDER PROTECTION, DEPARTMENT OF HOMELAND SECURITY; DEPARTMENT OF THE TREASURY (CONTINUED) ENTRY OF MERCHANDISE Quantity of Merchandise To Be Included in...

  13. Engineering protein interfaces yields ferritin disassembly and reassembly under benign experimental conditions.

    PubMed

    Chen, H; Zhang, S; Xu, C; Zhao, G

    2016-06-11

    Ferritin nanocages are promising platforms for drug encapsulation. However, extreme conditions (pH ≤ 2) required for dissociation limit their application. Here, we engineered protein interfaces to yield ferritin nanocages which disassemble at pH 4.0 and reassemble at pH 7.5. During this process, bioactive molecules can be encapsulated within the protein cavity. PMID:27194454

  14. Conceptual design report for the mechanical disassembly of Fort St. Vrain fuel elements

    SciTech Connect

    Lord, D.L.; Wadsworth, D.C.; Sekot, J.P.; Skinner, K.L.

    1993-04-01

    A conceptual design study was prepared that: (1) reviewed the operations necessary to perform the mechanical disassembly of Fort St. Vrain fuel elements; (2) contained a description and survey of equipment capable of performing the necessary functions; and (3) performed a tradeoff study for determining the preferred concepts and equipment specifications. A preferred system was recommended and engineering specifications for this system were developed.

  15. THE MAN&RSQUO;S JACKET DESIGN FOR DISASSEMBLY: AN IMPLEMENTATION OF C2CAD FRAMEWORK

    EPA Science Inventory

    The C2CAD model served as the basis in the man’s jacket design and production. In man’s jackets, both natural and synthetic materials are commonly used for fabrics, threads, and buttons. To promote disassembly and value retention, we minimized material diversity an...

  16. 19 CFR 141.58 - Single entry for separately arriving portions of unassembled or disassembled entities.

    Code of Federal Regulations, 2011 CFR

    2011-04-01

    ... 19 Customs Duties 2 2011-04-01 2011-04-01 false Single entry for separately arriving portions of unassembled or disassembled entities. 141.58 Section 141.58 Customs Duties U.S. CUSTOMS AND BORDER PROTECTION, DEPARTMENT OF HOMELAND SECURITY; DEPARTMENT OF THE TREASURY (CONTINUED) ENTRY OF MERCHANDISE Quantity of Merchandise To Be Included in...

  17. Real-Time Imaging of Single HIV-1 Disassembly with Multicolor Viral Particles.

    PubMed

    Ma, Yingxin; He, Zhike; Tan, Tianwei; Li, Wei; Zhang, Zhiping; Song, Shuang; Zhang, Xiaowei; Hu, Qinxue; Zhou, Peng; Wu, Yuntao; Zhang, Xian-En; Cui, Zongqiang

    2016-06-28

    Viral disassembly is poorly understood and related to the infection mechanism. However, directly observing the process in living cells remains technically challenging. In this study, the genome RNA, capsid, and matrix protein of the HIV-1 virus were labeled with a Ru(II) complex ([Ru(phen)2(dppz)](2+)), the TC-FlAsH/ReAsH system, and EGFP/ECFP, respectively. Using the multicolored virus and single-particle imaging, we were able to track the sequential disassembly process of single HIV-1 virus particles in live host cells. Approximately 0.1% of viral particles were observed to undergo a sequential disassembly process at 60-120 min post infection. The timing and efficiency of the disassembly were influenced by the cellular factor CypA and reverse transcription. The findings facilitate a better understanding of the processes governing the HIV-1 lifecycle. The multicolor labeling protocol developed in this study may find many applications involving virus-host-cell interactions. PMID:27253587

  18. Heat shock disassembles the nucleolus and inhibits nuclear protein import and poly(A)+ RNA export.

    PubMed Central

    Liu, Y; Liang, S; Tartakoff, A M

    1996-01-01

    Heat shock causes major positive and negative changes in gene expression, drastically alters the appearance of the nucleolus and inhibits rRNA synthesis. We here show that it causes many yeast nucleolar proteins, including the fibrillarin homolog Nop1p, to relocate to the cytoplasm. Relocation depends on several proteins implicated in mRNA transport (Mtrps) and is reversible. Two observations indicate, surprisingly, that disassembly results from a reduction in Ssa protein (Hsp70) levels: (i) selective depletion of Ssa1p leads to disassembly of the nucleolus; (ii) preincubation at 37 degrees C protects the nucleolus against disassembly by heat shock, unless expression of Ssa proteins is specifically inhibited. We observed that heat shock or reduction of Ssa1p levels inhibits protein import into the nucleus and therefore we propose that inhibition of import leads to disassembly of the nucleolus. These observations provide a simple explanation of the effects of heat shock on the anatomy of the nucleolus and rRNA transcription. They also extend understanding of the path of nuclear export. Since a number of nucleoplasmic proteins also relocate upon heat shock, these observations can provide a general mechanism for regulation of gene expression. Relocation of the hnRNP-like protein Mtr13p (= Npl3p, Nop3p), explains the heat shock sensitivity of export of average poly(A)+ RNA. Strikingly, Hsp mRNA export appears not to be affected. Images PMID:8978700

  19. Saccharomyces cerevisiae vacuolar H+-ATPase regulation by disassembly and reassembly: one structure and multiple signals.

    PubMed

    Parra, Karlett J; Chan, Chun-Yuan; Chen, Jun

    2014-06-01

    Vacuolar H(+)-ATPases (V-ATPases) are highly conserved ATP-driven proton pumps responsible for acidification of intracellular compartments. V-ATPase proton transport energizes secondary transport systems and is essential for lysosomal/vacuolar and endosomal functions. These dynamic molecular motors are composed of multiple subunits regulated in part by reversible disassembly, which reversibly inactivates them. Reversible disassembly is intertwined with glycolysis, the RAS/cyclic AMP (cAMP)/protein kinase A (PKA) pathway, and phosphoinositides, but the mechanisms involved are elusive. The atomic- and pseudo-atomic-resolution structures of the V-ATPases are shedding light on the molecular dynamics that regulate V-ATPase assembly. Although all eukaryotic V-ATPases may be built with an inherent capacity to reversibly disassemble, not all do so. V-ATPase subunit isoforms and their interactions with membrane lipids and a V-ATPase-exclusive chaperone influence V-ATPase assembly. This minireview reports on the mechanisms governing reversible disassembly in the yeast Saccharomyces cerevisiae, keeping in perspective our present understanding of the V-ATPase architecture and its alignment with the cellular processes and signals involved. PMID:24706019

  20. Primary disassembly of Light Water Breeder Reactor modules for core evaluation (LWBR Development Program)

    SciTech Connect

    Greenberger, R.J.; Miller, E.L.

    1987-10-01

    After successfully operating for 29,047 effective full power hours, the Light Water Breeder Reactor (LWBR) core was defueled prior to total decommissioning of the Shippingport Atomic Power Station. All nuclear fuel and much of the reactor internal hardware was removed from the reactor vessel. Non-fuel components were prepared for shipment to disposal sites, and the fuel assemblies were partially disassembled and shipped to the Expended Core Facility (ECF) in Idaho. At ECF, the fuel modules underwent further disassembly to provide fuel rods for nondestructive testing to establish the core's breeding efficiency and to provide core components for examinations to assess their performance characteristics. This report presents a basic description of the processes and equipment used to disassemble LWBR fuel modules for subsequent proof-of-breeding (POB) and core examination operations. Included are discussions of module handling fixtures and equipment, the underwater milling machine and bandsaw assemblies, and the associated design and operation of this equipment for LWBR fuel module disassembly.

  1. Shieldable tumor targeting based on pH responsive self-assembly/disassembly of gold nanoparticles.

    PubMed

    Tian, Zhiqing; Yang, Chengling; Wang, Wei; Yuan, Zhi

    2014-10-22

    A new approach to shield/deshield ligands for controllable tumor targeting was reported, which was based on amphiphilic self-assembly and disassembly of gold nanoparticles (Au NPs). Thanks to the excellent pH response of the system, glycyrrhetinic acid (GA) ligands can be buried inside the Au NPs' assembly at normal tissue pH (pH 7.4), while exposed when the nanostructure is disassembled at tumor extracellular pH (pHe 6.8). Hydrophobic GA molecules not only acted as ligands targeting tumor cells but also provided the major interparticle attractive force for Au NPs' assembling. An ordered assembly of Au NPs with regular shape, proper size and ultrasharp pH sensitivity (ΔpH ∼ 0.2) was achieved by fine-tuning of materials modified on Au NPs. Mechanism studies for assembly and disassembly of Au NPs indicated the possibility of a GA shield when the assembly formed, which was further demonstrated by bovine serum albumin absorption and cellular uptake. The assembly/disassembly process was reversible within extrinsic pH changes, which provides a perspective for reversible tumor targeting. PMID:25233129

  2. Roles of different pools of the mitotic checkpoint complex and the mechanisms of their disassembly

    PubMed Central

    Eytan, Esther; Sitry-Shevah, Danielle; Teichner, Adar; Hershko, Avram

    2013-01-01

    The mitotic (or spindle assembly) checkpoint system prevents premature separation of sister chromatids in mitosis. When the checkpoint is turned on, the mitotic checkpoint complex (MCC) inhibits the ubiquitin ligase anaphase-promoting complex/cyclosome (APC/C). MCC is composed of the checkpoint proteins BubR1, Bub3, and Mad2 associated with the APC/C activator Cdc20. The mechanisms of the assembly of MCC when the checkpoint is turned on, and of its disassembly when the checkpoint is inactivated, are not sufficiently understood. Previous reports indicated that APC/C-mediated polyubiquitylation of Cdc20 in MCC is required for the dissociation of APC/C-associated MCC, but not of free MCC. The pool of free MCC is disassembled by an ATP-dependent process stimulated by the Mad2-binding protein p31comet. It remained unknown whether free MCC is the precursor or the dissociation product of APC/C-bound MCC. By characterizing the mechanisms of the disassembly of APC/C-bound MCC in a purified system, we find that it cannot be the source of free MCC, because it is bound at high affinity and is released only in ubiquitylated or partially disassembled forms. By the use of a cell-free system from Xenopus eggs that reproduces the mitotic checkpoint, we show that MCC can be assembled in the absence of APC/C in a checkpoint-dependent manner. We propose that when the checkpoint is turned on, free MCC is the precursor of APC/C-bound MCC. When the mitotic checkpoint is extinguished, both APC/C-bound and free MCC pools have to be disassembled to release APC/C from inhibition. PMID:23754430

  3. Disassembly of myofibrils and potential imbalanced forces on Z-discs in cultured adult cardiomyocytes.

    PubMed

    Liu, Honghai; Qin, Wan; Wang, Zhonghai; Shao, Yonghong; Wang, Jingcai; Borg, Thomas K; Gao, Bruce Z; Xu, Meifeng

    2016-05-01

    Myofibrils are the main protein structures that generate force in the beating heart. Myofibril disassembly is related to many physiological and pathological processes. This study investigated, in a cultured rat adult cardiomyocyte model, the effect of force imbalance on myofibril disassembly. The imbalance of forces that were exerted on Z-discs was induced by the synergistic effect of broken intercalated discs and actin-myosin interaction. Cardiomyocytes with well-preserved intercalated discs were isolated from adult rat ventricles. The ultrastructure of cardiomyocyte was observed using a customized two-photon excitation fluorescence and second harmonic generation imaging system. The contraction of cardiomyocytes was recorded with a high-speed CCD camera, and the movement of cellular components was analyzed using a contractile imaging assay technique. The cardiomyocyte dynamic remodeling process was recorded using a time-lapse imaging system. The role of actin-myosin interaction in myofibril disassembly was investigated by incubating cardiomyocytes with blebbistatin (25 μM). Results demonstrated that the hierarchical disassembly process of myofibrils was initiated from cardiomyocyte free ends where intercalated discs had broken, during which the desmin network near the free cell ends was destroyed to release single myofibrils. Analysis of force (based on a schematic model of cardiomyocytes connected at intercalated discs) suggests that breaking of intercalated discs caused force imbalance on both sides of the Z-discs adjacent to the cell ends due to actin-myosin interaction. The damaged intercalated discs and actin-myosin interaction induced force imbalance on both sides of the Z-discs, which played an important role in the hierarchical disassembly of myofibrils. © 2016 Wiley Periodicals, Inc. PMID:27072949

  4. Pit disassembly and conversion demonstration environmental assessment and research and development activities

    SciTech Connect

    1998-08-01

    A significant portion of the surplus plutonium is in the form of pits, a nuclear weapons component. Pits are composed of plutonium which is sealed in a metallic shell. These pits would need to be safely disassembled and permanently converted to an unclassified form that would be suitable for long-term disposition and international inspection. To determine the feasibility of an integrated pit disassembly and conversion system, a Pit Disassembly and Conversion Demonstration is proposed to take place at the Los Alamos National Laboratory (LANL). This demonstration would be done in existing buildings and facilities, and would involve the disassembly of up to 250 pits and conversion of the recovered plutonium to plutonium metal ingots and plutonium dioxide. This demonstration also includes the conversion of up to 80 kilograms of clean plutonium metal to plutonium dioxide because, as part of the disposition process, some surplus plutonium metal may be converted to plutonium dioxide in the same facility as the surplus pits. The equipment to be used for the proposed demonstration addressed in this EA would use some parts of the Advanced Recovery and Integrated Extraction System (ARIES) capability, other existing equipment/capacities, plus new equipment that was developed at other sites. In addition, small-scale R and D activities are currently underway as part of the overall surplus plutonium disposition program. These R and D activities are related to pit disassembly and conversion, MOX fuel fabrication, and immobilization (in glass and ceramic forms). They are described in Section 7.0. On May 16, 1997, the Office of Fissile Materials Disposition (MD) notified potentially affected states and tribes that this EA would be prepared in accordance with NEPA. This EA has been prepared to provide sufficient information for DOE to determine whether a Finding of No Significant Impact (FONSI) is warranted or whether an EIS must be prepared.

  5. Low cytoplasmic pH reduces ER-Golgi trafficking and induces disassembly of the Golgi apparatus

    SciTech Connect

    Soonthornsit, Jeerawat; Yamaguchi, Yoko; Tamura, Daisuke; Ishida, Ryuichi; Nakakoji, Yoko; Osako, Shiho; Yamamoto, Akitsugu; Nakamura, Nobuhiro

    2014-11-01

    The Golgi apparatus was dramatically disassembled when cells were incubated in a low pH medium. The cis-Golgi disassembled quickly, extended tubules and spread to the periphery of cells within 30 min. In contrast, medial- and trans-Golgi were fragmented in significantly larger structures of smaller numbers at a slower rate and remained largely in structures distinct from the cis-Golgi. Electron microscopy revealed the complete disassembly of the Golgi stack in low pH treated cells. The effect of low pH was reversible; the Golgi apparatus reassembled to form a normal ribbon-like structure within 1–2 h after the addition of a control medium. The anterograde ER to Golgi transport and retrograde Golgi to ER transport were both reduced under low pH. Phospholipase A{sub 2} inhibitors (ONO, BEL) effectively suppressed the Golgi disassembly, suggesting that the phospholipase A{sub 2} was involved in the Golgi disassembly. Over-expression of Rab1, 2, 30, 33 and 41 also suppressed the Golgi disassembly under low pH, suggesting that they have protective role against Golgi disassembly. Low pH treatment reduced cytoplasmic pH, but not the luminal pH of the Golgi apparatus, strongly suggesting that reduction of the cytoplasmic pH triggered the Golgi disassembly. Because a lower cytoplasmic pH is induced in physiological or pathological conditions, disassembly of the Golgi apparatus and reduction of vesicular transport through the Golgi apparatus may play important roles in cell physiology and pathology. Furthermore, our findings indicated that low pH treatment can serve as an important tool to analyze the molecular mechanisms that support the structure and function of the Golgi apparatus. - Highlights: • The Golgi apparatus reversibly disassembles by low pH treatment. • The cis-Golgi disassembles quickly generating tubular structures. • Both anterograde and retrograde transport between the ER and the Golgi apparatus are reduced. • Phospholipase A{sub 2} inhibitors (ONO

  6. Processive ATP-driven Substrate Disassembly by the N-Ethylmaleimide-sensitive Factor (NSF) Molecular Machine*♦

    PubMed Central

    Cipriano, Daniel J.; Jung, Jaemyeong; Vivona, Sandro; Fenn, Timothy D.; Brunger, Axel T.; Bryant, Zev

    2013-01-01

    SNARE proteins promote membrane fusion by forming a four-stranded parallel helical bundle that brings the membranes into close proximity. Post-fusion, the complex is disassembled by an AAA+ ATPase called N-ethylmaleimide-sensitive factor (NSF). We present evidence that NSF uses a processive unwinding mechanism to disassemble SNARE proteins. Using a real-time disassembly assay based on fluorescence dequenching, we correlate NSF-driven disassembly rates with the SNARE-activated ATPase activity of NSF. Neuronal SNAREs activate the ATPase rate of NSF by ∼26-fold. One SNARE complex takes an average of ∼5 s to disassemble in a process that consumes ∼50 ATP. Investigations of substrate requirements show that NSF is capable of disassembling a truncated SNARE substrate consisting of only the core SNARE domain, but not an unrelated four-stranded coiled-coil. NSF can also disassemble an engineered double-length SNARE complex, suggesting a processive unwinding mechanism. We further investigated processivity using single-turnover experiments, which show that SNAREs can be unwound in a single encounter with NSF. We propose a processive helicase-like mechanism for NSF in which ∼1 residue is unwound for every hydrolyzed ATP molecule. PMID:23775070

  7. AGR-1 Irradiated Test Train Preliminary Inspection and Disassembly First Look

    SciTech Connect

    Paul Demkowicz; Lance Cole; Scott Ploger; Philip Winston; Binh Pham; Michael Abbott

    2011-01-01

    The AGR-1 irradiation experiment ended on November 6, 2009, after 620 effective full power days in the Advanced Test Reactor, achieving a peak burnup of 19.6% FIMA. The test train was shipped to the Materials and Fuels Complex in March 2010 for post-irradiation examination. The first PIE activities included non-destructive examination of the test train, followed by disassembly of the test train and individual capsules and detailed inspection of the capsule contents, including the fuel compacts and the graphite fuel holders. Dimensional measurements of the compacts, graphite holders, and steel capsules shells were performed using a custom vision measurement system (for outer diameters and lengths) and conventional bore gauges (for inner diameters). Gamma spectrometry of the intact test train gave a preliminary look at the condition of the interior components. No evidence of damage to compacts or graphite components was evident from the isotopic and gross gamma scans. Neutron radiography of the intact Capsule 2 showed a high degree of detail of interior components and confirmed the observation that there was no major damage to the capsule. Disassembly of the capsules was initiated using procedures qualified during out-of-cell mockup testing. Difficulties were encountered during capsule disassembly due to irradiation-induced changes in some of the capsule components’ properties, including embrittled niobium and molybdenum parts that were susceptible to fracture and swelling of the graphite fuel holders that affected their removal from the capsule shells. This required various improvised modifications to the disassembly procedure to avoid damage to the fuel compacts. Ultimately the capsule disassembly was successful and only one compact from Capsule 4 (out of 72 total in the test train) sustained damage during the disassembly process, along with the associated graphite holder. The compacts were generally in very good condition upon removal. Only relatively minor

  8. Assembly, operation and disassembly manual for the Battelle Large Volume Water Sampler (BLVWS)

    SciTech Connect

    Thomas, V.W.; Campbell, R.M.

    1984-12-01

    Assembly, operation and disassembly of the Battelle Large Volume Water Sampler (BLVWS) are described in detail. Step by step instructions of assembly, general operation and disassembly are provided to allow an operator completely unfamiliar with the sampler to successfully apply the BLVWS to his research sampling needs. The sampler permits concentration of both particulate and dissolved radionuclides from large volumes of ocean and fresh water. The water sample passes through a filtration section for particle removal then through sorption or ion exchange beds where species of interest are removed. The sampler components which contact the water being sampled are constructed of polyvinylchloride (PVC). The sampler has been successfully applied to many sampling needs over the past fifteen years. 9 references, 8 figures.

  9. Tethering of SCFDia2 to the Replisome Promotes Efficient Ubiquitylation and Disassembly of the CMG Helicase

    PubMed Central

    Maculins, Timurs; Nkosi, Pedro Junior; Nishikawa, Hiroko; Labib, Karim

    2015-01-01

    Summary Disassembly of the Cdc45-MCM-GINS (CMG) DNA helicase, which unwinds the parental DNA duplex at eukaryotic replication forks, is the key regulated step during replication termination but is poorly understood [1, 2]. In budding yeast, the F-box protein Dia2 drives ubiquitylation of the CMG helicase at the end of replication, leading to a disassembly pathway that requires the Cdc48 segregase [3]. The substrate-binding domain of Dia2 comprises leucine-rich repeats, but Dia2 also has a TPR domain at its amino terminus that interacts with the Ctf4 and Mrc1 subunits of the replisome progression complex [4, 5], which assembles around the CMG helicase at replication forks [6]. Previous studies suggested two disparate roles for the TPR domain of Dia2, either mediating replisome-specific degradation of Mrc1 and Ctf4 [4] or else tethering SCFDia2 (SCF [Skp1/cullin/F-box protein]) to the replisome to increase its local concentration at replication forks [5]. Here, we show that SCFDia2 does not mediate replisome-specific degradation of Mrc1 and Ctf4, either during normal S phase or in response to replication stress. Instead, the tethering of SCFDia2 to the replisome progression complex increases the efficiency of ubiquitylation of the Mcm7 subunit of CMG, both in vitro and in vivo. Correspondingly, loss of tethering reduces the efficiency of CMG disassembly in vivo and is synthetic lethal in combination with a disassembly-defective allele of CDC48. Residual ubiquitylation of Mcm7 in dia2-ΔTPR cells is still CMG specific, highlighting the complex regulation of the final stages of chromosome replication, about which much still remains to be learned. PMID:26255844

  10. Structural basis for assembly and disassembly of the CRM1 nuclear export complex

    SciTech Connect

    Dong, Xiuhua; Biswas, Anindita; Chook, Yuh Min

    2009-09-15

    CRM1 (or exportin 1, Xpo1) transports proteins out of the cell nucleus through the nuclear pore complex. In the cytoplasm, GTP hydrolysis and consequent dissociation of Ran from CRM1 releases low-affinity substrates, while additional factors facilitate release of high-affinity substrates. Here we provide a model for human CRM1 export complex assembly and disassembly through structural and biochemical analyses of CRM1 bound to the substrate snurportin 1 (SNUPN, also called snuportin 1).

  11. Detailed Per-residue Energetic Analysis Explains the Driving Force for Microtubule Disassembly

    PubMed Central

    Ayoub, Ahmed T.; Klobukowski, Mariusz; Tuszynski, Jack A.

    2015-01-01

    Microtubules are long filamentous hollow cylinders whose surfaces form lattice structures of αβ-tubulin heterodimers. They perform multiple physiological roles in eukaryotic cells and are targets for therapeutic interventions. In our study, we carried out all-atom molecular dynamics simulations for arbitrarily long microtubules that have either GDP or GTP molecules in the E-site of β-tubulin. A detailed energy balance of the MM/GBSA inter-dimer interaction energy per residue contributing to the overall lateral and longitudinal structural stability was performed. The obtained results identified the key residues and tubulin domains according to their energetic contributions. They also identified the molecular forces that drive microtubule disassembly. At the tip of the plus end of the microtubule, the uneven distribution of longitudinal interaction energies within a protofilament generates a torque that bends tubulin outwardly with respect to the cylinder's axis causing disassembly. In the presence of GTP, this torque is opposed by lateral interactions that prevent outward curling, thus stabilizing the whole microtubule. Once GTP hydrolysis reaches the tip of the microtubule (lateral cap), lateral interactions become much weaker, allowing tubulin dimers to bend outwards, causing disassembly. The role of magnesium in the process of outward curling has also been demonstrated. This study also showed that the microtubule seam is the most energetically labile inter-dimer interface and could serve as a trigger point for disassembly. Based on a detailed balance of the energetic contributions per amino acid residue in the microtubule, numerous other analyses could be performed to give additional insights into the properties of microtubule dynamic instability. PMID:26030285

  12. Artificial biofilms establish the role of matrix interactions in staphylococcal biofilm assembly and disassembly

    PubMed Central

    Stewart, Elizabeth J.; Ganesan, Mahesh; Younger, John G.; Solomon, Michael J.

    2015-01-01

    We demonstrate that the microstructural and mechanical properties of bacterial biofilms can be created through colloidal self-assembly of cells and polymers, and thereby link the complex material properties of biofilms to well understood colloidal and polymeric behaviors. This finding is applied to soften and disassemble staphylococcal biofilms through pH changes. Bacterial biofilms are viscoelastic, structured communities of cells encapsulated in an extracellular polymeric substance (EPS) comprised of polysaccharides, proteins, and DNA. Although the identity and abundance of EPS macromolecules are known, how these matrix materials interact with themselves and bacterial cells to generate biofilm morphology and mechanics is not understood. Here, we find that the colloidal self-assembly of Staphylococcus epidermidis RP62A cells and polysaccharides into viscoelastic biofilms is driven by thermodynamic phase instability of EPS. pH conditions that induce phase instability of chitosan produce artificial S. epidermidis biofilms whose mechanics match natural S. epidermidis biofilms. Furthermore, pH-induced solubilization of the matrix triggers disassembly in both artificial and natural S. epidermidis biofilms. This pH-induced disassembly occurs in biofilms formed by five additional staphylococcal strains, including three clinical isolates. Our findings suggest that colloidal self-assembly of cells and matrix polymers produces biofilm viscoelasticity and that biofilm control strategies can exploit this mechanism. PMID:26272750

  13. RhoJ interacts with the GIT-PIX complex and regulates focal adhesion disassembly.

    PubMed

    Wilson, Eleanor; Leszczynska, Katarzyna; Poulter, Natalie S; Edelmann, Francesca; Salisbury, Victoria A; Noy, Peter J; Bacon, Andrea; Rappoport, Joshua Z; Heath, John K; Bicknell, Roy; Heath, Victoria L

    2014-07-15

    RhoJ is a Rho GTPase expressed in endothelial cells and tumour cells, which regulates cell motility, invasion, endothelial tube formation and focal adhesion numbers. This study aimed to further delineate the molecular function of RhoJ. Using timelapse microscopy RhoJ was found to regulate focal adhesion disassembly; small interfering RNA (siRNA)-mediated knockdown of RhoJ increased focal adhesion disassembly time, whereas expression of an active mutant (daRhoJ) decreased it. Furthermore, daRhoJ co-precipitated with the GIT-PIX complex, a regulator of focal adhesion disassembly. An interaction between daRhoJ and GIT1 was confirmed using yeast two-hybrid experiments, and this depended on the Spa homology domain of GIT1. GIT1, GIT2, β-PIX (also known as ARHGEF7) and RhoJ all colocalised in focal adhesions and depended on each other for their recruitment to focal adhesions. Functionally, the GIT-PIX complex regulated endothelial tube formation, with knockdown of both GIT1 and GIT2, or β-PIX phenocopying RhoJ knockdown. RhoJ-knockout mice showed reduced tumour growth and diminished tumour vessel density, identifying a role for RhoJ in mediating tumour angiogenesis. These studies give new insight into the molecular function of RhoJ in regulating cell motility and tumour vessel formation. PMID:24928894

  14. Design-only conceptual design report for pit disassembly and conversion facility. Rev 0

    SciTech Connect

    Zygmunt, S.; Christensen, L.; Richardson, C.

    1997-12-12

    This design-only conceptual design report (DOCDR) was prepared to support a funding request by the Department of Energy (DOE)-Office of Fissile Material Disposition (OFMD) for engineering design of the Pit Disassembly and Conversion Facility (PDCF) Project No. 99-D-141. The PDCF will be used to disassemble the nation`s inventory of surplus nuclear weapons pits and convert the plutonium recovered from those pits into a form suitable for storage, international inspection, and final disposition. The PDCF is a complex consisting of a hardened building that will contain the plutonium processes in a safe and secure manner, and conventional buildings and structures that will house support personnel, systems, and equipment. The PDCF uses the Advanced Recovery and Integrated Extraction System (ARIES), a low waste, modular pyroprocessing system to convert pits to plutonium oxide. The PDCF project consists of engineering and design, and construction of the buildings and structures, and engineering and design, procurement, installation, testing and start-up of equipment to disassemble pits and convert plutonium in pits to oxide form. The facility is planned to operate for 10 years, averaging 3.5 metric tons (3.86 tons) of plutonium metal per year. On conclusion of operations, the PDCF will be decontaminated and decommissioned.

  15. The Non-Catalytic Domains of Drosophila Katanin Regulate Its Abundance and Microtubule-Disassembly Activity

    PubMed Central

    Grode, Kyle D.; Rogers, Stephen L.

    2015-01-01

    Microtubule severing is a biochemical reaction that generates an internal break in a microtubule and regulation of microtubule severing is critical for cellular processes such as ciliogenesis, morphogenesis, and meiosis and mitosis. Katanin is a conserved heterodimeric ATPase that severs and disassembles microtubules, but the molecular determinants for regulation of microtubule severing by katanin remain poorly defined. Here we show that the non-catalytic domains of Drosophila katanin regulate its abundance and activity in living cells. Our data indicate that the microtubule-interacting and trafficking (MIT) domain and adjacent linker region of the Drosophila katanin catalytic subunit Kat60 cooperate to regulate microtubule severing in two distinct ways. First, the MIT domain and linker region of Kat60 decrease its abundance by enhancing its proteasome-dependent degradation. The Drosophila katanin regulatory subunit Kat80, which is required to stabilize Kat60 in cells, conversely reduces the proteasome-dependent degradation of Kat60. Second, the MIT domain and linker region of Kat60 augment its microtubule-disassembly activity by enhancing its association with microtubules. On the basis of our data, we propose that the non-catalytic domains of Drosophila katanin serve as the principal sites of integration of regulatory inputs, thereby controlling its ability to sever and disassemble microtubules. PMID:25886649

  16. Cardiac Extracellular Matrix Scaffold Generated Using Sarcomeric Disassembly and Antigen Removal.

    PubMed

    Papalamprou, Angela; Griffiths, Leigh G

    2016-04-01

    Xenogeneic cardiac extracellular matrix (cECM) scaffolds for reconstructive cardiac surgery applications have potential to overcome the limitations of current clinically utilized patch materials. A potentially ideal cECM scaffold would be immunologically acceptable while preserving the native cECM niche. Production of such a scaffold necessitates removal of cellular and antigenic components from cardiac tissue while preserving cECM structure/function properties. Existing decellularization methodologies predominantly utilize denaturing detergents which might irreversibly alter cECM material properties. To overcome potential deficiencies of current approaches, the effect of sarcomere relaxation and disassembly on resultant cECM scaffold cellularity was investigated. Additionally, the ability of sequential differential protein solubilization (antigen removal-AR) to reduce cECM scaffold antigenicity was examined. Sarcomeric relaxation and disassembly were necessary to achieve scaffold acellularity. All groups in which AR was employed displayed statistically significant decreases in residual antigenicity regardless of their degree of acellularity. AR combined with sarcomeric disassembly preserved structural, biochemical, mechanical and recellularization properties of the cECM scaffold. However, sodium dodecyl sulfate significantly altered cECM properties. This study demonstrates the importance of solubilizing cellular elements and antigenic components in a stepwise manner for production of a potentially ideal cECM scaffold and may have implications for future tissue engineering and regenerative medicine applications. PMID:26215309

  17. Using L-STM to directly visualize enzymatic self-assembly/disassembly of nanofibers.

    PubMed

    Zheng, Zhen; Wang, Jihao; Chen, Peiyao; Xie, Maolin; Zhang, Lei; Hou, Yubin; Zhang, Xin; Jiang, Jun; Wang, Junfeng; Lu, Qingyou; Liang, Gaolin

    2016-08-18

    Self-assembly/disassembly is ubiquitous in nature and plays an important role in many biological events. But noninvasive characterization of this process in real time at molecular resolution remains challenging. Herein, using homebuilt liquid-phase scanning tunneling microscopy (L-STM) with ultrahigh stability, we directly visualized enzymatic self-assembly/disassembly of oligopeptide nanofibers in real time for the first time. Static high-resolution L-STM images clearly showed the molecular packing details in the supramolecular nanofiber and the diameter of the nanofiber was consistent with that of cryo transmission electron microscopy (cryo-TEM) observations. Moreover, the self-repairing behavior of the supramolecular nanofibers was also directly observed at high resolution for the first time. This work unprecedentedly revealed new insights into Nature-mimic self-assembly and disassembly at the molecular level. It also illustrates the potential of our homebuilt L-STM in studying delicate biological processes in physiological solution with high resolution. PMID:27492656

  18. Single-molecule imaging of a three-component ordered actin disassembly mechanism

    PubMed Central

    Jansen, Silvia; Collins, Agnieszka; Chin, Samantha M.; Ydenberg, Casey A.; Gelles, Jeff; Goode, Bruce L.

    2015-01-01

    The mechanisms by which cells destabilize and rapidly disassemble filamentous actin networks have remained elusive; however, Coronin, Cofilin and AIP1 have been implicated in this process. Here using multi-wavelength single-molecule fluorescence imaging, we show that mammalian Cor1B, Cof1 and AIP1 work in concert through a temporally ordered pathway to induce highly efficient severing and disassembly of actin filaments. Cor1B binds to filaments first, and dramatically accelerates the subsequent binding of Cof1, leading to heavily decorated, stabilized filaments. Cof1 in turn recruits AIP1, which rapidly triggers severing and remains bound to the newly generated barbed ends. New growth at barbed ends generated by severing was blocked specifically in the presence of all three proteins. This activity enabled us to reconstitute and directly visualize single actin filaments being rapidly polymerized by formins at their barbed ends while simultanteously being stochastically severed and capped along their lengths, and disassembled from their pointed ends. PMID:25995115

  19. APC15 mediates CDC20 auto-ubiquitylation by APC/CMCC and MCC disassembly

    PubMed Central

    Uzunova, Kristina; Dye, Billy T.; Schutz, Hannelore; Ladurner, Rene; Petzold, Georg; Toyoda, Yusuke; Jarvis, Marc A.; Brown, Nicholas G.; Poser, Ina; Novatchkova, Maria; Mechtler, Karl; Hyman, Anthony A.; Stark, Holger; Schulman, Brenda A.; Peters, Jan-Michael

    2012-01-01

    The anaphase-promoting complex/cyclosome bound to CDC20 (APC/CCDC20) initiates anaphase by ubiquitylating B-type cyclins and securin. During chromosome bi-orientation, CDC20 assembles with MAD2, BUBR1 and BUB3 into a mitotic checkpoint complex (MCC) which inhibits substrate recruitment to the APC/C. APC/C activation depends on MCC disassembly, which has been proposed to require CDC20 auto-ubiquitylation. Here we characterized APC15, a human APC/C subunit related to yeast Mnd2. APC15 is located near APC/C’s MCC binding site, is required for APC/CMCC-dependent CDC20 auto-ubiquitylation and degradation, and for timely anaphase initiation, but is dispensable for substrate ubiquitylation by APC/CCDC20 and APC/CCDH1. Our results support the view that MCC is continuously assembled and disassembled to enable rapid activation of APC/CCDC20 and that CDC20 auto-ubiquitylation promotes MCC disassembly. We propose that APC15 and Mnd2 negatively regulate APC/C coactivators, and report the first generation of recombinant human APC/C. PMID:23007861

  20. Molecular disassembly of rice and lotus starches during thermal processing and its effect on starch digestibility.

    PubMed

    Wang, Shujun; Sun, Yue; Wang, Jinrong; Wang, Shuo; Copeland, Les

    2016-02-01

    The molecular disassembly of starch during thermal processing is a major determinant for the susceptibility of starch to enzymatic digestion. In the present study, the effects of thermal processing on the disassembly of the granular structure and the in vitro enzymatic digestibility of rice and lotus starches were investigated. After heating at 50 °C, rice and lotus starches did not show significant changes in granular morphology, long-range crystallinity and short-range molecular order. As the temperature increased to 60 °C, rice starch underwent a partial gelatinization followed by an incomplete disruption of granular morphology, crystallites and molecular order. In contrast, lotus starch was almost completely gelatinized at 60 °C. At 70 °C or higher, both starches were fully gelatinized with complete disruption of the micro and macro structures. Our results show that gelatinization greatly increased the in vitro enzymatic digestibility of both starches, but that the degree of disassembly of the starch structure during thermal processing was not a major determinant of the digestibility of gelatinized starch. PMID:26829664

  1. Disassembly of mitotic checkpoint complexes by the joint action of the AAA-ATPase TRIP13 and p31comet

    PubMed Central

    Eytan, Esther; Wang, Kexi; Miniowitz-Shemtov, Shirly; Sitry-Shevah, Danielle; Kaisari, Sharon; Yen, Tim J.; Liu, Song-Tao; Hershko, Avram

    2014-01-01

    The mitotic (or spindle assembly) checkpoint system delays anaphase until all chromosomes are correctly attached to the mitotic spindle. When the checkpoint is active, a Mitotic Checkpoint Complex (MCC) assembles and inhibits the ubiquitin ligase Anaphase-Promoting Complex/Cyclosome (APC/C). MCC is composed of the checkpoint proteins Mad2, BubR1, and Bub3 associated with the APC/C activator Cdc20. When the checkpoint signal is turned off, MCC is disassembled and the checkpoint is inactivated. The mechanisms of the disassembly of MCC are not sufficiently understood. We have previously observed that ATP hydrolysis is required for the action of the Mad2-binding protein p31comet to disassemble MCC. We now show that HeLa cell extracts contain a factor that promotes ATP- and p31comet-dependent disassembly of a Cdc20–Mad2 subcomplex and identify it as Thyroid Receptor Interacting Protein 13 (TRIP13), an AAA-ATPase known to interact with p31comet. The joint action of TRIP13 and p31comet also promotes the release of Mad2 from MCC, participates in the complete disassembly of MCC and abrogates checkpoint inhibition of APC/C. We propose that TRIP13 plays centrally important roles in the sequence of events leading to MCC disassembly and checkpoint inactivation. PMID:25092294

  2. AGR-2 Irradiated Test Train Preliminary Inspection and Disassembly First Look

    SciTech Connect

    Ploger, Scott; Demkowciz, Paul; Harp, Jason

    2015-05-01

    The AGR 2 irradiation experiment began in June 2010 and was completed in October 2013. The test train was shipped to the Materials and Fuels Complex in July 2014 for post-irradiation examination (PIE). The first PIE activities included nondestructive examination of the test train, followed by disassembly of the test train and individual capsules and detailed inspection of the capsule contents, including the fuel compacts and their graphite fuel holders. Dimensional metrology was then performed on the compacts, graphite holders, and steel capsule shells. AGR 2 disassembly and metrology were performed with the same equipment used successfully on AGR 1 test train components. Gamma spectrometry of the intact test train gave a preliminary look at the condition of the interior components. No evidence of damage to compacts or graphite components was evident from the isotopic and gross gamma scans. Disassembly of the AGR 2 test train and its capsules was conducted rapidly and efficiently by employing techniques refined during the AGR 1 disassembly campaign. Only one major difficulty was encountered while separating the test train into capsules when thermocouples (of larger diameter than used in AGR 1) and gas lines jammed inside the through tubes of the upper capsules, which required new tooling for extraction. Disassembly of individual capsules was straightforward with only a few minor complications. On the whole, AGR 2 capsule structural components appeared less embrittled than their AGR 1 counterparts. Compacts from AGR 2 Capsules 2, 3, 5, and 6 were in very good condition upon removal. Only relatively minor damage or markings were visible using high resolution photographic inspection. Compact dimensional measurements indicated radial shrinkage between 0.8 to 1.7%, with the greatest shrinkage observed on Capsule 2 compacts that were irradiated at higher temperature. Length shrinkage ranged from 0.1 to 0.9%, with by far the lowest axial shrinkage on Capsule 3 compacts

  3. Real-time analysis of composite magnetic nanoparticle disassembly in vascular cells and biomimetic media.

    PubMed

    Tengood, Jillian E; Alferiev, Ivan S; Zhang, Kehan; Fishbein, Ilia; Levy, Robert J; Chorny, Michael

    2014-03-18

    The fate of nanoparticle (NP) formulations in the multifaceted biological environment is a key determinant of their biocompatibility and therapeutic performance. An understanding of the degradation patterns of different types of clinically used and experimental NP formulations is currently incomplete, posing an unmet need for novel analytical tools providing unbiased quantitative measurements of NP disassembly directly in the medium of interest and in conditions relevant to specific therapeutic/diagnostic applications. In the present study, this challenge was addressed with an approach enabling real-time in situ monitoring of the integrity status of NPs in cells and biomimetic media using Förster resonance energy transfer (FRET). Disassembly of polylactide-based magnetic NPs (MNPs) was investigated in a range of model biomimetic media and in cultured vascular cells using an experimentally established quantitative correlation between particle integrity and FRET efficiency controlled through adjustments in the spectral overlap between two custom-synthesized polylactide-fluorophore (boron dipyrromethene) conjugates incorporated in MNPs. The results suggest particle disassembly governed by diffusion-reaction processes with kinetics strongly dependent on conditions promoting release of oligomeric fragments from the particle matrix. Thus, incubation in gels simulating the extracellular environment and in protein-rich serum resulted in notably lower and higher MNP decomposition rates, respectively, compared with nonviscous liquid buffers. The diffusion-reaction mechanism also is consistent with a significant cell growth-dependent acceleration of MNP processing in dividing vs. contact-inhibited vascular cells. The FRET-based analytical strategy and experimental results reported herein may facilitate the development and inform optimization of biodegradable nanocarriers for cell and drug delivery applications. PMID:24591603

  4. Fruit softening and pectin disassembly: an overview of nanostructural pectin modifications assessed by atomic force microscopy

    PubMed Central

    Paniagua, Candelas; Posé, Sara; Morris, Victor J.; Kirby, Andrew R.; Quesada, Miguel A.; Mercado, José A.

    2014-01-01

    Background One of the main factors that reduce fruit quality and lead to economically important losses is oversoftening. Textural changes during fruit ripening are mainly due to the dissolution of the middle lamella, the reduction of cell-to-cell adhesion and the weakening of parenchyma cell walls as a result of the action of cell wall modifying enzymes. Pectins, major components of fruit cell walls, are extensively modified during ripening. These changes include solubilization, depolymerization and the loss of neutral side chains. Recent evidence in strawberry and apple, fruits with a soft or crisp texture at ripening, suggests that pectin disassembly is a key factor in textural changes. In both these fruits, softening was reduced as result of antisense downregulation of polygalacturonase genes. Changes in pectic polymer size, composition and structure have traditionally been studied by conventional techniques, most of them relying on bulk analysis of a population of polysaccharides, and studies focusing on modifications at the nanostructural level are scarce. Atomic force microscopy (AFM) allows the study of individual polymers at high magnification and with minimal sample preparation; however, AFM has rarely been employed to analyse pectin disassembly during fruit ripening. Scope In this review, the main features of the pectin disassembly process during fruit ripening are first discussed, and then the nanostructural characterization of fruit pectins by AFM and its relationship with texture and postharvest fruit shelf life is reviewed. In general, fruit pectins are visualized under AFM as linear chains, a few of which show long branches, and aggregates. Number- and weight-average values obtained from these images are in good agreement with chromatographic analyses. Most AFM studies indicate reductions in the length of individual pectin chains and the frequency of aggregates as the fruits ripen. Pectins extracted with sodium carbonate, supposedly located within

  5. Demonstrate fuel disassembly/encapsulation. Technical progress report, April 1981-June 1981

    SciTech Connect

    1981-08-03

    Work on this project is focused on demonstrating disassembly and encapsulation of nuclear fuels as a means to increase spent fuel storage. The effort commenced on April 17, 1980, and is progressing satisfactorily. The Equipment/Procedure Preparation sub-task is essentially complete. The Equipment Demonstration sub-task and the Process Assessment Studies sub-task continue. The equipment design effort associated with the first sub-task, the component testing and checking associated with the second sub-task, and the technical studies and investigations associated with the latter sub-task continue to verify the feasibility of this concept to enhance the use of fuel storage resources.

  6. Late Disassembly of Femoral Head and Neck of A Modular Primary Total Hip Arthroplasty

    PubMed Central

    Ahmed, Parvej; Kumar, Dinesh

    2015-01-01

    Introduction: Modular total hip arthroplasty system are now widely used, as these components increase the flexibility during primary and revision total hip arthoplasty. But this modularity itself associated with some risk of intraoperative and postoperative complications. Case Report: We report a case of late disassembly of a primary total arthroplasty in a 42 years old patient five years after the replacement surgery where the femoral head remained in the acetabular socket. Conclusion: Femoral head should be solidly impacted onto the stem and confirm that it has been assembled correctly before reduction. PMID:27299010

  7. HOPS prevents the disassembly of trans-SNARE complexes by Sec17p/Sec18p during membrane fusion

    PubMed Central

    Xu, Hao; Jun, Youngsoo; Thompson, James; Yates, John; Wickner, William

    2010-01-01

    SNARE-dependent membrane fusion requires the disassembly of cis-SNARE complexes (formed by SNAREs anchored to one membrane) followed by the assembly of trans-SNARE complexes (SNAREs anchored to two apposed membranes). Although SNARE complex disassembly and assembly might be thought to be opposing reactions, the proteins promoting disassembly (Sec17p/Sec18p) and assembly (the HOPS complex) work synergistically to support fusion. We now report that trans-SNARE complexes formed during vacuole fusion are largely associated with Sec17p. Using a reconstituted proteoliposome fusion system, we show that trans-SNARE complex, like cis-SNARE complex, is sensitive to Sec17p/Sec18p mediated disassembly. Strikingly, HOPS inhibits the disassembly of SNARE complexes in the trans-, but not in the cis-, configuration. This selective HOPS preservation of trans-SNARE complexes requires HOPS:SNARE recognition and is lost when the apposed bilayers are dissolved in Triton X-100; it is also observed during fusion of isolated vacuoles. HOPS thus directs the Sec17p/Sec18p chaperone system to maximize functional trans-SNARE complex for membrane fusion, a new role of tethering factors during membrane traffic. PMID:20473271

  8. Reconstitution of the cell cycle-regulated Golgi disassembly and reassembly in a cell-free system

    PubMed Central

    Tang, Danming; Xiang, Yi; Wang, Yanzhuang

    2012-01-01

    The Golgi apparatus undergoes extensive disassembly during mitosis and reassembly in post-mitotic daughter cells. This process has been mimicked in vitro by treating Golgi membranes with mitotic and interphase cytosol. To determine the minimal machinery that controls the morphological change, we have developed a defined Golgi disassembly and reassembly assay that reconstitutes this process using purified proteins instead of cytosol. Treatment of Golgi membranes with mitotic kinases and COPI coat proteins efficiently disassembles the membranes into mitotic Golgi fragments, whereas further incubation with p97 or N-ethylmaleimide-sensitive factor (two AAA ATPases involved in membrane fusion) and their cofactors, in combination with protein phosphatase PP2A, leads to reassembly of the membranes into new Golgi stacks. The whole process takes 3–4 d and is applicable for identification and determination of novel cytosolic and membrane proteins that regulate Golgi membrane dynamics in the cell cycle. PMID:20360770

  9. Uninformed and probabilistic distributed agent combinatorial searches for the unary NP-complete disassembly line balancing problem

    NASA Astrophysics Data System (ADS)

    McGovern, Seamus M.; Gupta, Surendra M.

    2005-11-01

    Disassembly takes place in remanufacturing, recycling, and disposal, with a line being the best choice for automation. The disassembly line balancing problem seeks a sequence which: is feasible, minimizes workstations, and ensures similar idle times, as well as other end-of-life specific concerns. Finding the optimal balance is computationally intensive due to exponential growth. Combinatorial optimization methods hold promise for providing solutions to the disassembly line balancing problem, which is proven here to belong to the class of unary NP-complete problems. Probabilistic (ant colony optimization) and uninformed (H-K) search methods are presented and compared. Numerical results are obtained using a recent case study to illustrate the search implementations and compare their performance. Conclusions drawn include the consistent generation of near-optimal solutions, the ability to preserve precedence, the speed of the techniques, and their practicality due to ease of implementation.

  10. Intracellular disassembly and localization of a new P123-PEI-R13/DNA complex.

    PubMed

    Zhu, Manman; Liu, Kehai; Zhu, Qing; Chen, Shunsheng; Lv, Hui; Zhao, Wenfang; Mao, Yuan; Hu, Jing

    2014-01-01

    The appropriate location and release of target gene is necessary for gene therapy. In our previous paper, a gene vector named P123-PEI-R13 has been successfully synthesized, and the physical characteristics and cellular trafficking of nanoparticle P123-PEI-R13/DNA has been explored explicitly, but little was known about its disassembly within cells. In order to investigate its intracellular disassembly, P123-PEI-R13/DNA complex was exposed to the different competitors (RNA, DNA, proteins) or different conditions of pH and osmolarity, DNA release was determined by gel electrophoresis. Meanwhile, confocal laser technology was used to locate the complex in cells. The results revealed that DNA, RNA and osmolarity could affect the stability of the complex obviously, especially RNA which exist in nucleus. In addition, the speed of DNA release decreased as the weight ratio of polymer increased. Images got by a confocal fluorescence microscope confirmed that after cell uptake, P123-PEI-R13 could translocate DNA into nucleus. PMID:25226888

  11. Synthesis of Zeolites Using the ADOR (Assembly-Disassembly-Organization-Reassembly) Route.

    PubMed

    Wheatley, Paul S; Čejka, Jiří; Morris, Russell E

    2016-01-01

    Zeolites are an important class of materials that have wide ranging applications such as heterogeneous catalysts and adsorbents which are dependent on their framework topology. For new applications or improvements to existing ones, new zeolites with novel pore systems are desirable. We demonstrate a method for the synthesis of novel zeolites using the ADOR route. ADOR is an acronym for Assembly, Disassembly, Organization and Reassembly. This synthetic route takes advantage of the assembly of a relatively poorly stable that which can be selectively disassembled into a layered material. The resulting layered intermediate can then be organized in different manners by careful chemical manipulation and then reassembled into zeolites with new topologies. By carefully controlling the organization step of the synthetic pathway, new zeolites with never before seen topologies are capable of being synthesized. The structures of these new zeolites are confirmed using powder X-ray diffraction and further characterized by nitrogen adsorption and scanning electron microscopy. This new synthetic pathway for zeolites demonstrates its capability to produce novel frameworks that have never been prepared by traditional zeolite synthesis techniques. PMID:27078165

  12. TLR ligand–induced podosome disassembly in dendritic cells is ADAM17 dependent

    PubMed Central

    West, Michele A.; Prescott, Alan R.; Chan, Kui Ming; Zhou, Zhongjun; Rose-John, Stefan; Scheller, Jürgen; Watts, Colin

    2008-01-01

    Toll-like receptor (TLR) signaling induces a rapid reorganization of the actin cytoskeleton in cultured mouse dendritic cells (DC), leading to enhanced antigen endocytosis and a concomitant loss of filamentous actin–rich podosomes. We show that as podosomes are lost, TLR signaling induces prominent focal contacts and a transient reduction in DC migratory capacity in vitro. We further show that podosomes in mouse DC are foci of pronounced gelatinase activity, dependent on the enzyme membrane type I matrix metalloprotease (MT1-MMP), and that DC transiently lose the ability to degrade the extracellular matrix after TLR signaling. Surprisingly, MMP inhibitors block TLR signaling–induced podosome disassembly, although stimulated endocytosis is unaffected, which demonstrates that the two phenomena are not obligatorily coupled. Podosome disassembly caused by TLR signaling occurs normally in DC lacking MT1-MMP, and instead requires the tumor necrosis factor α–converting enzyme ADAM17 (a disintegrin and metalloprotease 17), which demonstrates a novel role for this “sheddase” in regulating an actin-based structure. PMID:18762577

  13. Synthesis of Zeolites Using the ADOR (Assembly-Disassembly-Organization-Reassembly) Route

    PubMed Central

    Wheatley, Paul S.; Čejka, Jiří; Morris, Russell E.

    2016-01-01

    Zeolites are an important class of materials that have wide ranging applications such as heterogeneous catalysts and adsorbents which are dependent on their framework topology. For new applications or improvements to existing ones, new zeolites with novel pore systems are desirable. We demonstrate a method for the synthesis of novel zeolites using the ADOR route. ADOR is an acronym for Assembly, Disassembly, Organization and Reassembly. This synthetic route takes advantage of the assembly of a relatively poorly stable that which can be selectively disassembled into a layered material. The resulting layered intermediate can then be organized in different manners by careful chemical manipulation and then reassembled into zeolites with new topologies. By carefully controlling the organization step of the synthetic pathway, new zeolites with never before seen topologies are capable of being synthesized. The structures of these new zeolites are confirmed using powder X-ray diffraction and further characterized by nitrogen adsorption and scanning electron microscopy. This new synthetic pathway for zeolites demonstrates its capability to produce novel frameworks that have never been prepared by traditional zeolite synthesis techniques. PMID:27078165

  14. Extracellular Inhibitors, Repellents, and Semaphorin/Plexin/MICAL-mediated Actin Filament Disassembly

    PubMed Central

    Hung, Ruei-Jiun; Terman, Jonathan R.

    2011-01-01

    Multiple extracellular signals have been identified that regulate actin dynamics within motile cells, but how these instructive cues present on the cell surface exert their precise effects on the internal actin cytoskeleton is still poorly understood. One particularly interesting class of these cues is a group of extracellular proteins that negatively alter the movement of cells and their processes. Over the years, these types of events have been described using a variety of terms and herein we provide an overview of inhibitory/repulsive cellular phenomena and highlight the largest known protein family of repulsive extracellular cues, the Semaphorins. Specifically, the Semaphorins (Semas) utilize Plexin cell-surface receptors to dramatically collapse the actin cytoskeleton and we summarize what is known of the direct molecular and biochemical mechanisms of Sema-triggered actin filament (F-actin) disassembly. We also discuss new observations from our lab that reveal that the multi-domain oxidoreductase (Redox) enzyme MICAL, an important mediator of Sema/Plexin repulsion, is a novel F-actin disassembly factor. Our results indicate that MICAL triggers Sema/Plexin-mediated reorganization of the F-actin cytoskeleton and suggest a role for specific Redox signaling events in regulating actin dynamics. PMID:21800438

  15. A role for Arf1 in mitotic Golgi disassembly, chromosome segregation, and cytokinesis

    PubMed Central

    Altan-Bonnet, Nihal; Phair, Robert D.; Polishchuk, Roman S.; Weigert, Roberto; Lippincott-Schwartz, Jennifer

    2003-01-01

    In mitosis, chromosome, cytoskeleton, and organelle dynamics must be coordinated for successful cell division. Here, we present evidence for a role for Arf1, a small GTPase associated with the Golgi apparatus, in the orchestration of mitotic Golgi breakdown, chromosome segregation, and cytokinesis. We show that early in mitosis Arf1 becomes inactive and dissociates from Golgi membranes. This is followed by the dispersal of numerous Arf1-dependent peripheral Golgi proteins and subsequent Golgi disassembly. If Arf1 is kept in an active state by treatment with the small molecule H89 or expression of its GTP-locked form, intact Golgi membranes with bound peripheral proteins persist throughout mitosis. These cells enter mitosis but exhibit gross defects in chromosome segregation and cytokinetic furrow ingression. These findings suggest that mitotic Golgi disassembly depends on Arf1 inactivation and is used by the cell to disperse numerous peripheral Golgi proteins for coordinating the behavior of Golgi membranes, chromosomes, and cytoskeleton during mitosis. PMID:14585930

  16. Probing the disassembly of ultrafast laser heated gold using frequency domain interferometry.

    NASA Astrophysics Data System (ADS)

    Ao, Tommy; Ping, Yuan; Lee, Edward

    2005-10-01

    Ultrafast laser heating of a solid offers a unique approach to examine the behavior of non-equilibrium high energy density states. Initially, the electrons are optically excited while the ions in the lattice remain cold. This is followed by electron-electron and electron-phonon relaxation. Recently, experiments were performed in which ultrathin freestanding, gold foils were heated by a femtosecond pump laser to a strongly overdriven regime with energy densities reaching 20 MJ/kg. Interestingly, femtosecond laser reflectivity and transmission measurements on the heated sample revealed a quasi-steady-state behavior before the onset of hydrodynamic expansion. This led to the conjecture of the existence of a metastable, disordered state prior to the disassembly of the solid. To further examine the dynamics of ultrafast laser heated solids, frequency domain interferometry (FDI) was used to provide an independent observation. The highly sensitive change in the phase shift of the FDI probe clearly showed evidence of the quasi-steady-state behavior. The new experiment also yielded a detailed measurement of the time scale of such a quasi-steady-state phase that may help elucidate the process of electron-phonon coupling and disassembly in a strongly overdriven regime.

  17. Generation of contractile actomyosin bundles depends on mechanosensitive actin filament assembly and disassembly.

    PubMed

    Tojkander, Sari; Gateva, Gergana; Husain, Amjad; Krishnan, Ramaswamy; Lappalainen, Pekka

    2015-01-01

    Adhesion and morphogenesis of many non-muscle cells are guided by contractile actomyosin bundles called ventral stress fibers. While it is well established that stress fibers are mechanosensitive structures, physical mechanisms by which they assemble, align, and mature have remained elusive. Here we show that arcs, which serve as precursors for ventral stress fibers, undergo lateral fusion during their centripetal flow to form thick actomyosin bundles that apply tension to focal adhesions at their ends. Importantly, this myosin II-derived force inhibits vectorial actin polymerization at focal adhesions through AMPK-mediated phosphorylation of VASP, and thereby halts stress fiber elongation and ensures their proper contractility. Stress fiber maturation additionally requires ADF/cofilin-mediated disassembly of non-contractile stress fibers, whereas contractile fibers are protected from severing. Taken together, these data reveal that myosin-derived tension precisely controls both actin filament assembly and disassembly to ensure generation and proper alignment of contractile stress fibers in migrating cells. PMID:26652273

  18. Generation of contractile actomyosin bundles depends on mechanosensitive actin filament assembly and disassembly

    PubMed Central

    Tojkander, Sari; Gateva, Gergana; Husain, Amjad; Krishnan, Ramaswamy; Lappalainen, Pekka

    2015-01-01

    Adhesion and morphogenesis of many non-muscle cells are guided by contractile actomyosin bundles called ventral stress fibers. While it is well established that stress fibers are mechanosensitive structures, physical mechanisms by which they assemble, align, and mature have remained elusive. Here we show that arcs, which serve as precursors for ventral stress fibers, undergo lateral fusion during their centripetal flow to form thick actomyosin bundles that apply tension to focal adhesions at their ends. Importantly, this myosin II-derived force inhibits vectorial actin polymerization at focal adhesions through AMPK-mediated phosphorylation of VASP, and thereby halts stress fiber elongation and ensures their proper contractility. Stress fiber maturation additionally requires ADF/cofilin-mediated disassembly of non-contractile stress fibers, whereas contractile fibers are protected from severing. Taken together, these data reveal that myosin-derived tension precisely controls both actin filament assembly and disassembly to ensure generation and proper alignment of contractile stress fibers in migrating cells. DOI: http://dx.doi.org/10.7554/eLife.06126.001 PMID:26652273

  19. γ-SNAP stimulates disassembly of endosomal SNARE complexes and regulates endocytic trafficking pathways.

    PubMed

    Inoue, Hiroki; Matsuzaki, Yuka; Tanaka, Ayaka; Hosoi, Kaori; Ichimura, Kaoru; Arasaki, Kohei; Wakana, Yuichi; Asano, Kenichi; Tanaka, Masato; Okuzaki, Daisuke; Yamamoto, Akitsugu; Tani, Katsuko; Tagaya, Mitsuo

    2015-08-01

    Soluble N-ethylmaleimide-sensitive factor attachment protein receptors (SNAREs) that reside in the target membranes and transport vesicles assemble into specific SNARE complexes to drive membrane fusion. N-ethylmaleimide-sensitive factor (NSF) and its attachment protein, α-SNAP (encoded by NAPA), catalyze disassembly of the SNARE complexes in the secretory and endocytic pathways to recycle them for the next round of fusion events. γ-SNAP (encoded by NAPG) is a SNAP isoform, but its function in SNARE-mediated membrane trafficking remains unknown. Here, we show that γ-SNAP regulates the endosomal trafficking of epidermal growth factor (EGF) receptor (EGFR) and transferrin. Immunoprecipitation and mass spectrometry analyses revealed that γ-SNAP interacts with a limited range of SNAREs, including endosomal ones. γ-SNAP, as well as α-SNAP, mediated the disassembly of endosomal syntaxin-7-containing SNARE complexes. Overexpression and small interfering (si)RNA-mediated depletion of γ-SNAP changed the morphologies and intracellular distributions of endosomes. Moreover, the depletion partially suppressed the exit of EGFR and transferrin from EEA1-positive early endosomes to delay their degradation and uptake. Taken together, our findings suggest that γ-SNAP is a unique SNAP that functions in a limited range of organelles - including endosomes - and their trafficking pathways. PMID:26101353

  20. Plastics disassembly versus bulk recycling: engineering design for end-of-life electronics resource recovery.

    PubMed

    Rios, Pedro; Stuart, Julie Ann; Grant, Ed

    2003-12-01

    Annual plastic flows through the business and consumer electronics manufacturing supply chain include nearly 3 billion lb of high-value engineering plastics derived from petroleum. The recovery of resource value from this stream presents critical challenges in areas of materials identification and recycling process design that demand new green engineering technologies applied together with life cycle assessment and ecological supply chain analysis to create viable plastics-to-plastics supply cycles. The sustainable recovery of potentially high-value engineering plastics streams requires that recyclers either avoid mixing plastic parts or purify later by separating smaller plastic pieces created in volume reduction (shredding) steps. Identification and separation constitute significant barriers in the plastics-to-plastics recycling value proposition. In the present work, we develop a model that accepts randomly arriving electronic products to study scenarios by which a recycler might identify and separate high-value engineering plastics as well as metals. Using discrete eventsimulation,we compare current mixed plastics recovery with spectrochemical plastic resin identification and subsequent sorting. Our results show that limited disassembly with whole-part identification can produce substantial yields in separated streams of recovered engineering thermoplastics. We find that disassembly with identification does not constitute a bottleneck, but rather, with relatively few workers, can be configured to pull the process and thus decrease maximum staging space requirements. PMID:14700333

  1. The cellular prion protein traps Alzheimer's Aβ in an oligomeric form and disassembles amyloid fibers

    PubMed Central

    Younan, Nadine D.; Sarell, Claire J.; Davies, Paul; Brown, David R.; Viles, John H.

    2013-01-01

    There is now strong evidence to show that the presence of the cellular prion protein (PrPC) mediates amyloid-β (Aβ) neurotoxicity in Alzheimer's disease (AD). Here, we probe the molecular details of the interaction between PrPC and Aβ and discover that substoichiometric amounts of PrPC, as little as 1/20, relative to Aβ will strongly inhibit amyloid fibril formation. This effect is specific to the unstructured N-terminal domain of PrPC. Electron microscopy indicates PrPC is able to trap Aβ in an oligomeric form. Unlike fibers, this oligomeric Aβ contains antiparallel β sheet and binds to a oligomer specific conformational antibody. Our NMR studies show that a specific region of PrPC, notably residues 95–113, binds to Aβ oligomers, but only once Aβ misfolds. The ability of PrPC to trap and concentrate Aβ in an oligomeric form and disassemble mature fibers suggests a mechanism by which PrPC might confer Aβ toxicity in AD, as oligomers are thought to be the toxic form of Aβ. Identification of a specific recognition site on PrPC that traps Aβ in an oligomeric form is potentially a therapeutic target for the treatment of Alzheimer's disease.—Younan, N. D., Sarell, C. J., Davies, P., Brown, D. R., Viles, J. H. The cellular prion protein traps Alzheimer's Aβ in an oligomeric form and disassembles amyloid fibers. PMID:23335053

  2. Whole Cell Cryo-Electron Tomography Reveals Distinct Disassembly Intermediates of Vaccinia Virus

    PubMed Central

    Cyrklaff, Marek; Linaroudis, Alexandros; Boicu, Marius; Chlanda, Petr; Baumeister, Wolfgang; Griffiths, Gareth; Krijnse-Locker, Jacomine

    2007-01-01

    At each round of infection, viruses fall apart to release their genome for replication, and then reassemble into stable particles within the same host cell. For most viruses, the structural details that underlie these disassembly and assembly reactions are poorly understood. Cryo-electron tomography (cryo-ET), a unique method to investigate large and asymmetric structures at the near molecular resolution, was previously used to study the complex structure of vaccinia virus (VV). Here we study the disassembly of VV by cryo-ET on intact, rapidly frozen, mammalian cells, infected for up to 60 minutes. Binding to the cell surface induced distinct structural rearrangements of the core, such as a shape change, the rearrangement of its surface spikes and de-condensation of the viral DNA. We propose that the cell surface induced changes, in particular the decondensation of the viral genome, are a prerequisite for the subsequent release of the vaccinia DNA into the cytoplasm, which is followed by its cytoplasmic replication. Generally, this is the first study that employs whole cell cryo-ET to address structural details of pathogen-host cell interaction. PMID:17487274

  3. Quantifying cadherin mechanotransduction machinery assembly/disassembly dynamics using fluorescence covariance analysis

    PubMed Central

    Vedula, Pavan; Cruz, Lissette A.; Gutierrez, Natasha; Davis, Justin; Ayee, Brian; Abramczyk, Rachel; Rodriguez, Alexis J.

    2016-01-01

    Quantifying multi-molecular complex assembly in specific cytoplasmic compartments is crucial to understand how cells use assembly/disassembly of these complexes to control function. Currently, biophysical methods like Fluorescence Resonance Energy Transfer and Fluorescence Correlation Spectroscopy provide quantitative measurements of direct protein-protein interactions, while traditional biochemical approaches such as sub-cellular fractionation and immunoprecipitation remain the main approaches used to study multi-protein complex assembly/disassembly dynamics. In this article, we validate and quantify multi-protein adherens junction complex assembly in situ using light microscopy and Fluorescence Covariance Analysis. Utilizing specific fluorescently-labeled protein pairs, we quantified various stages of adherens junction complex assembly, the multiprotein complex regulating epithelial tissue structure and function following de novo cell-cell contact. We demonstrate: minimal cadherin-catenin complex assembly in the perinuclear cytoplasm and subsequent localization to the cell-cell contact zone, assembly of adherens junction complexes, acto-myosin tension-mediated anchoring, and adherens junction maturation following de novo cell-cell contact. Finally applying Fluorescence Covariance Analysis in live cells expressing fluorescently tagged adherens junction complex proteins, we also quantified adherens junction complex assembly dynamics during epithelial monolayer formation. PMID:27357130

  4. Asymmetric ring structure of Vps4 required for ESCRT-III disassembly

    NASA Astrophysics Data System (ADS)

    Caillat, Christophe; Macheboeuf, Pauline; Wu, Yuanfei; McCarthy, Andrew A.; Boeri-Erba, Elisabetta; Effantin, Gregory; Göttlinger, Heinrich G.; Weissenhorn, Winfried; Renesto, Patricia

    2015-12-01

    The vacuolar protein sorting 4 AAA-ATPase (Vps4) recycles endosomal sorting complexes required for transport (ESCRT-III) polymers from cellular membranes. Here we present a 3.6-Å X-ray structure of ring-shaped Vps4 from Metallosphera sedula (MsVps4), seen as an asymmetric pseudohexamer. Conserved key interface residues are shown to be important for MsVps4 assembly, ATPase activity in vitro, ESCRT-III disassembly in vitro and HIV-1 budding. ADP binding leads to conformational changes within the protomer, which might propagate within the ring structure. All ATP-binding sites are accessible and the pseudohexamer binds six ATP with micromolar affinity in vitro. In contrast, ADP occupies one high-affinity and five low-affinity binding sites in vitro, consistent with conformational asymmetry induced on ATP hydrolysis. The structure represents a snapshot of an assembled Vps4 conformation and provides insight into the molecular motions the ring structure undergoes in a concerted action to couple ATP hydrolysis to ESCRT-III substrate disassembly.

  5. Asymmetric ring structure of Vps4 required for ESCRT-III disassembly

    PubMed Central

    Caillat, Christophe; Macheboeuf, Pauline; Wu, Yuanfei; McCarthy, Andrew A.; Boeri-Erba, Elisabetta; Effantin, Gregory; Göttlinger, Heinrich G.; Weissenhorn, Winfried; Renesto, Patricia

    2015-01-01

    The vacuolar protein sorting 4 AAA–ATPase (Vps4) recycles endosomal sorting complexes required for transport (ESCRT-III) polymers from cellular membranes. Here we present a 3.6-Å X-ray structure of ring-shaped Vps4 from Metallosphera sedula (MsVps4), seen as an asymmetric pseudohexamer. Conserved key interface residues are shown to be important for MsVps4 assembly, ATPase activity in vitro, ESCRT-III disassembly in vitro and HIV-1 budding. ADP binding leads to conformational changes within the protomer, which might propagate within the ring structure. All ATP-binding sites are accessible and the pseudohexamer binds six ATP with micromolar affinity in vitro. In contrast, ADP occupies one high-affinity and five low-affinity binding sites in vitro, consistent with conformational asymmetry induced on ATP hydrolysis. The structure represents a snapshot of an assembled Vps4 conformation and provides insight into the molecular motions the ring structure undergoes in a concerted action to couple ATP hydrolysis to ESCRT-III substrate disassembly. PMID:26632262

  6. 3M Empore(R)-Membrane Filter Technology: Cesium Removal from Fuel Storage Water Basin

    SciTech Connect

    Oji, L.N.

    2003-07-15

    This paper describes results from a seven-day demonstration of the use of 3M Empore(R) membrane filter loaded with ion exchange material (potassium cobalt hexacynoferrate) for cesium uptake from the R-Disassembly Basin at the Savannah River Site. The goal of the demonstration was to evaluate the ability of the Process Absorber Development unit, a water pre-filtration /CoHex configuration on a skid, to remove cesium from R-Disassembly Basin at a linear processing flow rate of 22.9 liters per minute (1,204 liters/minute/m2). Over 210,000 liters of R-Disassembly Basin water was processed through the PADU without a cesium breakthrough, that is, the effluent after treatment with CoHex, contained less than detectable amounts of radioactive cesium. Some of the observed advantages of the Empore(R) membrane filter technology over conventional packed column ion exchange systems include rapid flow rates without channeling effects, low volume secondary waste and fast extraction or rapid kinetics per unit of flow.

  7. An analysis of thermionic space nuclear reactor power system: I. Effect of disassembling radial reflector, following a reactivity initiated accident

    SciTech Connect

    El-Genk, M.S.; Paramonov, D. )

    1993-01-10

    An analysis is performed to determine the effect of disassembling the radial reflector of the TOPAZ-II reactor, following a hypothetical severe Reactivity Initiated Accident (RIA). Such an RIA is assumed to occur during the system start-up in orbit due to a malfunction of the drive mechanism of the control drums, causing the drums to rotate the full 180[degree] outward at their maximum speed of 1.4[degree]/s. Results indicate that disassembling only three of twelve radial reflector panels would successfully shutdown the reactor, with little overheating of the fuel and the moderator.

  8. Supramolecular disassembly of facially amphiphilic dendrimer assemblies in response to physical, chemical, and biological stimuli.

    PubMed

    Raghupathi, Krishna R; Guo, Jing; Munkhbat, Oyuntuya; Rangadurai, Poornima; Thayumanavan, S

    2014-07-15

    CONSPECTUS: Supramolecular assemblies formed from spontaneous self-assembly of amphiphilic macromolecules are explored as biomimetic architectures and for applications in areas such as sensing, drug delivery, and diagnostics. Macromolecular assemblies are usually preferred, compared with their simpler small molecule counterparts, due to their low critical aggregate concentrations (CAC) and high thermodynamic stability. This Account focuses on the structural and functional aspects of assemblies formed from dendrimers, specifically facially amphiphilic dendrons that form micelle or inverse micelle type supramolecular assemblies depending on the nature of the solvent medium. The micelle type assemblies formed from facially amphiphilic dendrons sequester hydrophobic guest molecules in their interiors. The stability of these assemblies is dependent on the relative compatibility of the hydrophilic and hydrophobic functionalities with water, often referred to as hydrophilic-lipophilic balance (HLB). Disruption of the HLB, using an external stimulus, could lead to disassembly of the aggregates, which can then be utilized to cause an actuation event, such as guest molecule release. Studying these possibilities has led to (i) a robust and general strategy for stimulus-induced disassembly and molecular release and (ii) the introduction of a new approach to protein-responsive supramolecular disassembly. The latter strategy provides a particularly novel avenue for impacting biomedical applications. Most of the stimuli-sensitive supramolecular assemblies have been designed to be responsive to factors such pH, temperature, and redox conditions. The reason for this interest stems from the fact that certain disease microenvironments have aberrations in these factors. However, these variations are the secondary imbalances in biology. Imbalances in protein activity are the primary reasons for most, if not all, human pathology. There have been no robust strategies in stimulus

  9. Three steps forward, two steps back: mechanistic insights into the assembly and disassembly of the SNARE complex.

    PubMed

    Bombardier, Jeffrey P; Munson, Mary

    2015-12-01

    Membrane fusion is a tightly controlled process in all eukaryotic cell types. The SNARE family of proteins is required for fusion throughout the exocytic and endocytic trafficking pathways. SNAREs on a transport vesicle interact with the cognate SNAREs on the target membrane, forming an incredibly stable SNARE complex that provides energy for the membranes to fuse, although many aspects of the mechanism remain elusive. Recent advances in single-molecule and high-resolution structural methods provide exciting new insights into how SNARE complexes assemble, including measurements of assembly energetics and identification of intermediates in the assembly pathway. These techniques were also key in elucidating mechanistic details into how the SNARE complex is disassembled, including details of the energetics required for ATP-dependent α-SNAP/NSF-mediated SNARE complex disassembly, and the structural changes that accompany ATP hydrolysis by the disassembly machinery. Additionally, SNARE complex formation and disassembly are tightly regulated processes; innovative biochemical and biophysical characterization has deepened our understanding of how these regulators work to control membrane fusion and exocytosis. PMID:26498108

  10. Pseudorabies virus US3 leads to filamentous actin disassembly and contributes to viral genome delivery to the nucleus.

    PubMed

    Jacob, Thary; Van den Broeke, Céline; Grauwet, Korneel; Baert, Kim; Claessen, Christophe; De Pelsmaeker, Steffi; Van Waesberghe, Cliff; Favoreel, Herman W

    2015-06-12

    The conserved alphaherpesvirus US3 tegument protein induces rearrangements of the actin cytoskeleton, consisting of protrusion formation and stress fiber breakdown. Although US3 does not affect levels of total actin protein, it remains unclear whether US3 modulates the total levels of filamentous (F) actin. In this report, we show that the pseudorabies virus (PRV) US3 protein, via its kinase activity, leads to disassembly of F-actin in porcine ST cells. F-actin disassembly has been reported before to contribute to host cell entry of HIV. In line with this, in the current study, we report that US3 has a previously uncharacterized role in viral genome delivery to the nucleus, since quantitative polymerase chain reaction (qPCR) assays on nuclear fractions demonstrated a reduced nuclear delivery of US3null PRV compared to wild type PRV genomes. Treatment of cells with the actin depolymerizing drug cytochalasin D enhanced virus genome delivery to the nucleus, particularly of US3null PRV, supporting a role for F-actin disassembly during certain aspects of viral entry. In conclusion, the US3 kinase of PRV leads to F-actin depolymerization, and US3 and F-actin disassembly contribute to viral genome delivery to the nucleus. PMID:25869795

  11. Neuroprotective Effects Against POCD by Photobiomodulation: Evidence from Assembly/Disassembly of the Cytoskeleton

    PubMed Central

    Liebert, Ann D.; Chow, Roberta T.; Bicknell, Brian T.; Varigos, Euahna

    2016-01-01

    Postoperative cognitive dysfunction (POCD) is a decline in memory following anaesthesia and surgery in elderly patients. While often reversible, it consumes medical resources, compromises patient well-being, and possibly accelerates progression into Alzheimer’s disease. Anesthetics have been implicated in POCD, as has neuroinflammation, as indicated by cytokine inflammatory markers. Photobiomodulation (PBM) is an effective treatment for a number of conditions, including inflammation. PBM also has a direct effect on microtubule disassembly in neurons with the formation of small, reversible varicosities, which cause neural blockade and alleviation of pain symptoms. This mimics endogenously formed varicosities that are neuroprotective against damage, toxins, and the formation of larger, destructive varicosities and focal swellings. It is proposed that PBM may be effective as a preconditioning treatment against POCD; similar to the PBM treatment, protective and abscopal effects that have been demonstrated in experimental models of macular degeneration, neurological, and cardiac conditions. PMID:26848276

  12. Biothiol-triggered, self-disassembled silica nanobeads for intracellular drug delivery.

    PubMed

    Huang, Xin-Chun; Wu, Li-Bang; Hsu, Jen-Fang; Shigeto, Shinsuke; Hsu, Hsin-Yun

    2015-09-01

    Silica-based nanomaterials have demonstrated great potential in biomedical applications due to their chemical inertness. However, the degradability and endosomal trapping issues remain as rate-limiting barriers during their innovation. In this study, we provide a simple yet novel sol-gel approach to construct the redox-responsive silica nanobeads (ReSiNs), which could be rapidly disassembled upon redox gradient for intracellular drug delivery. The disulfide-linked scaffold of the nanobead was synthesized by employing the dithiobis-(succinimidyl propionate) to bridge (3-aminopropyl)-trimethoxysilane. Such silica matrix could be efficiently disrupted in response to intracellular glutathione, resulting in drug release and collapse of entire nanocarrier. Moreover, the ReSiNs exhibited insignificant cytotoxicity before and after the degradation. These results indicated the potential of using ReSiNs as a novel silica-based, biothiol-degradable nanoplatform for future drug delivery. PMID:25983312

  13. Ultratrace Detection of Toxic Chemicals: Triggered Disassembly of Supramolecular Nanotube Wrappers.

    PubMed

    Ishihara, Shinsuke; Azzarelli, Joseph M; Krikorian, Markrete; Swager, Timothy M

    2016-07-01

    Chemical sensors offer opportunities for improving personal security, safety, and health. To enable broad adoption of chemical sensors requires performance and cost advantages that are best realized from innovations in the design of the sensing (transduction) materials. Ideal materials are sensitive and selective to specific chemicals or chemical classes and provide a signal that is readily interfaced with portable electronic devices. Herein we report that wrapping single walled carbon nanotubes with metallo-supramolecular polymers creates sensory devices with a dosimetric (time- and concentration-integrated) increase in electrical conductivity that is triggered by electrophilic chemical substances such as diethylchlorophosphate, a nerve agent simulant. The mechanism of this process involves the disassembly of the supramolecular polymer, and we demonstrate its utility in a wireless inductively powered sensing system based on near-field communication technology. Specifically, the dosimeters can be powered and read wirelessly with conventional smartphones to create sensors with ultratrace detection limits. PMID:27336905

  14. Disassembly time of deuterium-cluster-fusion plasma irradiated by an intense laser pulse

    DOE PAGESBeta

    Bang, W.

    2015-07-02

    Energetic deuterium ions from large deuterium clusters (>10 nm diameter) irradiated by an intense laser pulse (>10¹⁶ W/cm²) produce DD fusion neutrons for a time interval determined by the geometry of the resulting fusion plasma. We show an analytical solution of this time interval, the plasma disassembly time, for deuterium plasmas that are cylindrical in shape. Assuming a symmetrically expanding deuterium plasma, we calculate the expected fusion neutron yield and compare with an independent calculation of the yield using the concept of a finite confinement time at a fixed plasma density. The calculated neutron yields agree quantitatively with the availablemore » experimental data. Our one-dimensional simulations indicate that one could expect a tenfold increase in total neutron yield by magnetically confining a 10 - keV deuterium fusion plasma for 10 ns.« less

  15. Disassembly time of deuterium-cluster-fusion plasma irradiated by an intense laser pulse

    SciTech Connect

    Bang, W.

    2015-07-02

    Energetic deuterium ions from large deuterium clusters (>10 nm diameter) irradiated by an intense laser pulse (>10¹⁶ W/cm²) produce DD fusion neutrons for a time interval determined by the geometry of the resulting fusion plasma. We show an analytical solution of this time interval, the plasma disassembly time, for deuterium plasmas that are cylindrical in shape. Assuming a symmetrically expanding deuterium plasma, we calculate the expected fusion neutron yield and compare with an independent calculation of the yield using the concept of a finite confinement time at a fixed plasma density. The calculated neutron yields agree quantitatively with the available experimental data. Our one-dimensional simulations indicate that one could expect a tenfold increase in total neutron yield by magnetically confining a 10 - keV deuterium fusion plasma for 10 ns.

  16. Temporal sequence of cell wall disassembly events in developing fruits. 1. Analysis of raspberry (Rubus idaeus).

    PubMed

    Vicente, Ariel R; Ortugno, Claudia; Powell, Ann L T; Greve, L Carl; Labavitch, John M

    2007-05-16

    Raspberry fruits were harvested at five developmental stages, from green to red ripe, and the changes in cell wall composition, pectin and hemicellulose solubilization, and depolymerization were analyzed. Fruit softening at intermediate stages of ripening was associated with increased pectin solubilization, which occurred without depolymerization. Arabinose was found to be the most abundant noncellulosic neutral sugar in the cell wall and showed dramatic solubilization late in ripening. No changes in pectin molecular size were observed even at the 100% red stage. Subsequently, as fruit became fully ripe a dramatic depolymerization occurred. In contrast, the hemicellulosic fractions showed no significant changes in content or polymer size during ripening. The paper discusses the sequence of events leading to cell wall disassembly in raspberry fruit. PMID:17428067

  17. Regulation of ceramide channel formation and disassembly: Insights on the initiation of apoptosis

    PubMed Central

    Abou-Ghali, Majdouline; Stiban, Johnny

    2015-01-01

    Sphingolipid research has surged in the past two decades and has produced a wide variety of evidence supporting the role of this class of molecules in mediating cellular growth, differentiation, senescence, and apoptosis. Ceramides are a subgroup of sphingolipids (SLs) that are directly involved in the process of initiation of apoptosis. We, and others, have recently shown that ceramides are capable of the formation of protein-permeable channels in mitochondrial outer membranes under physiological conditions. These pores are indeed good candidates for the pathway of release of pro-apoptotic proteins from the mitochondrial intermembrane space (IMS) into the cytosol to initiate intrinsic apoptosis. Here, we review recent findings on the regulation of ceramide channel formation and disassembly, highlighting possible implications on the initiation of the intrinsic apoptotic pathway. PMID:26587005

  18. Disassembly time of deuterium-cluster-fusion plasma irradiated by an intense laser pulse.

    PubMed

    Bang, W

    2015-07-01

    Energetic deuterium ions from large deuterium clusters (>10nm diameter) irradiated by an intense laser pulse (>10(16)W/cm(2)) produce DD fusion neutrons for a time interval determined by the geometry of the resulting fusion plasma. We present an analytical solution of this time interval, the plasma disassembly time, for deuterium plasmas that are cylindrical in shape. Assuming a symmetrically expanding deuterium plasma, we calculate the expected fusion neutron yield and compare with an independent calculation of the yield using the concept of a finite confinement time at a fixed plasma density. The calculated neutron yields agree quantitatively with the available experimental data. Our one-dimensional simulations indicate that one could expect a tenfold increase in total neutron yield by magnetically confining a 10-keV deuterium fusion plasma for 10ns. PMID:26274289

  19. Distinctive PSA-NCAM and NCAM Hallmarks in Glutamate-Induced Dendritic Atrophy and Synaptic Disassembly

    PubMed Central

    Podestá, María Fernanda; Yam, Patricia; Codagnone, Martín Gabriel; Uccelli, Nonthué Alejandra; Colman, David; Reinés, Analía

    2014-01-01

    Dendritic and synapse remodeling are forms of structural plasticity that play a critical role in normal hippocampal function. Neural cell adhesion molecule (NCAM) and its polysialylated form (PSA-NCAM) participate in neurite outgrowth and synapse formation and plasticity. However, it remains unclear whether they contribute to dendritic retraction and synaptic disassembly. Cultured hippocampal neurons exposed to glutamate (5 µM) showed a reduced MAP-2 (+) area in the absence of neuronal death 24 h after the insult. Concomitantly, synapse loss, revealed by decreased synaptophysin and post-synaptic density-95 cluster number and area, together with changes in NCAM and PSA-NCAM levels were found. Dendritic atrophy and PSA-NCAM reduction proved NMDA-receptor dependent. Live-imaging experiments evidenced dendritic atrophy 4 h after the insult; this effect was preceded by smaller NCAM clusters (1 h) and decreased surface and total PSA-NCAM levels (3 h). Simultaneously, total NCAM cluster number and area remained unchanged. The subsequent synapse disassembly (6 h) was accompanied by reductions in total NCAM cluster number and area. A PSA mimetic peptide prevented both the dendritic atrophy and the subsequent synaptic changes (6 h) but had no effect on the earliest synaptic remodeling (3 h). Thus, NCAM-synaptic reorganization and PSA-NCAM level decrease precede glutamate-induced dendritic atrophy, whereas the NCAM level reduction is a delayed event related to synapse loss. Consequently, distinctive stages in PSA-NCAM/NCAM balance seem to accompany glutamate-induced dendritic atrophy and synapse loss. PMID:25279838

  20. RADIOLOGICAL SURVEY STATION DEVELOPMENT FOR THE PIT DISASSEMBLY AND CONVERSION PROJECT

    SciTech Connect

    Dalmaso, M.; Gibbs, K.; Gregory, D.

    2011-05-22

    The Savannah River National Laboratory (SRNL) has developed prototype equipment to demonstrate remote surveying of Inner and Outer DOE Standard 3013 containers for fixed and transferable contamination in accordance with DOE Standard 3013 and 10 CFR 835 Appendix B. When fully developed the equipment will be part of a larger suite of equipment used to package material in accordance with DOE Standard 3013 at the Pit Disassembly and Conversion Project slated for installation at the Savannah River Site. The prototype system consists of a small six-axis industrial robot with an end effector consisting of a force sensor, vacuum gripper and a three fingered pneumatic gripper. The work cell also contains two alpha survey instruments, swipes, swipe dispenser, and other ancillary equipment. An external controller interfaces with the robot controller, survey instruments and other ancillary equipment to control the overall process. SRNL is developing automated equipment for the Pit Disassembly and Conversion (PDC) Project that is slated for the Savannah River Site (SRS). The equipment being developed is automated packaging equipment for packaging plutonium bearing materials in accordance with DOE-STD-3013-2004. The subject of this paper is the development of a prototype Radiological Survey Station (RSS). Other automated equipment being developed for the PDC includes the Bagless transfer System, Outer Can Welder, Gantry Robot System (GRS) and Leak Test Station. The purpose of the RSS is to perform a frisk and swipe of the DOE Standard 3013 Container (either inner can or outer can) to check for fixed and transferable contamination. This is required to verify that the contamination levels are within the limits specified in DOE-STD-3013-2004 and 10 CFR 835, Appendix D. The surface contamination limit for the 3013 Outer Can (OC) is 500 dpm/100 cm2 (total) and 20 dpm/100 cm2 (transferable). This paper will concentrate on the RSS developments for the 3013 OC but the system for the

  1. The Prolyl Isomerase Pin1 Promotes the Herpesvirus-Induced Phosphorylation-Dependent Disassembly of the Nuclear Lamina Required for Nucleocytoplasmic Egress.

    PubMed

    Milbradt, Jens; Hutterer, Corina; Bahsi, Hanife; Wagner, Sabrina; Sonntag, Eric; Horn, Anselm H C; Kaufer, Benedikt B; Mori, Yasuko; Sticht, Heinrich; Fossen, Torgils; Marschall, Manfred

    2016-08-01

    The nuclear lamina lines the inner nuclear membrane providing a structural framework for the nucleus. Cellular processes, such as nuclear envelope breakdown during mitosis or nuclear export of large ribonucleoprotein complexes, are functionally linked to the disassembly of the nuclear lamina. In general, lamina disassembly is mediated by phosphorylation, but the precise molecular mechanism is still not completely understood. Recently, we suggested a novel mechanism for lamina disassembly during the nuclear egress of herpesviral capsids which involves the cellular isomerase Pin1. In this study, we focused on mechanistic details of herpesviral nuclear replication to demonstrate the general importance of Pin1 for lamina disassembly. In particular, Ser22-specific lamin phosphorylation consistently generates a Pin1-binding motif in cells infected with human and animal alpha-, beta-, and gammaherpesviruses. Using nuclear magnetic resonance spectroscopy, we showed that binding of Pin1 to a synthetic lamin peptide induces its cis/trans isomerization in vitro. A detailed bioinformatic evaluation strongly suggests that this structural conversion induces large-scale secondary structural changes in the lamin N-terminus. Thus, we concluded that a Pin1-induced conformational change of lamins may represent the molecular trigger responsible for lamina disassembly. Consistent with this concept, pharmacological inhibition of Pin1 activity blocked lamina disassembly in herpesvirus-infected fibroblasts and consequently impaired virus replication. In addition, a phospho-mimetic Ser22Glu lamin mutant was still able to form a regular lamina structure and overexpression of a Ser22-phosphorylating kinase did not induce lamina disassembly in Pin1 knockout cells. Intriguingly, this was observed in absence of herpesvirus infection proposing a broader importance of Pin1 for lamina constitution. Thus, our results suggest a functional model of similar events leading to disassembly of the nuclear

  2. The Prolyl Isomerase Pin1 Promotes the Herpesvirus-Induced Phosphorylation-Dependent Disassembly of the Nuclear Lamina Required for Nucleocytoplasmic Egress

    PubMed Central

    Milbradt, Jens; Hutterer, Corina; Bahsi, Hanife; Wagner, Sabrina; Sonntag, Eric; Kaufer, Benedikt B.; Mori, Yasuko; Sticht, Heinrich; Fossen, Torgils; Marschall, Manfred

    2016-01-01

    The nuclear lamina lines the inner nuclear membrane providing a structural framework for the nucleus. Cellular processes, such as nuclear envelope breakdown during mitosis or nuclear export of large ribonucleoprotein complexes, are functionally linked to the disassembly of the nuclear lamina. In general, lamina disassembly is mediated by phosphorylation, but the precise molecular mechanism is still not completely understood. Recently, we suggested a novel mechanism for lamina disassembly during the nuclear egress of herpesviral capsids which involves the cellular isomerase Pin1. In this study, we focused on mechanistic details of herpesviral nuclear replication to demonstrate the general importance of Pin1 for lamina disassembly. In particular, Ser22-specific lamin phosphorylation consistently generates a Pin1-binding motif in cells infected with human and animal alpha-, beta-, and gammaherpesviruses. Using nuclear magnetic resonance spectroscopy, we showed that binding of Pin1 to a synthetic lamin peptide induces its cis/trans isomerization in vitro. A detailed bioinformatic evaluation strongly suggests that this structural conversion induces large-scale secondary structural changes in the lamin N-terminus. Thus, we concluded that a Pin1-induced conformational change of lamins may represent the molecular trigger responsible for lamina disassembly. Consistent with this concept, pharmacological inhibition of Pin1 activity blocked lamina disassembly in herpesvirus-infected fibroblasts and consequently impaired virus replication. In addition, a phospho-mimetic Ser22Glu lamin mutant was still able to form a regular lamina structure and overexpression of a Ser22-phosphorylating kinase did not induce lamina disassembly in Pin1 knockout cells. Intriguingly, this was observed in absence of herpesvirus infection proposing a broader importance of Pin1 for lamina constitution. Thus, our results suggest a functional model of similar events leading to disassembly of the nuclear

  3. Parana basin

    SciTech Connect

    Zalan, P.V.; Wolff, S.; Conceicao, J.C.J.; Vieira, I.S.; Astolfi, M.A.; Appi, V.T.; Zanotto, O.; Neto, E.V.S.; Cerqueira, J.R.

    1987-05-01

    The Parana basin is a large intracratonic basin in South America, developed entirely on continental crust and filled with sedimentary and volcanic rocks ranging in age from Silurian to Cretaceous. It occupies the southern portion of Brazil (1,100,000 km/sup 2/ or 425,000 mi/sup 2/) and the eastern half of Paraguay (100,000 km/sup 2/ or 39,000 mi/sup 2/); its extension into Argentina and Uruguay is known as the Chaco-Parana basin. Five major depositional sequences (Silurian, Devonian, Permo-Carboniferous, Triassic, Juro-Cretaceous) constitute the stratigraphic framework of the basin. The first four are predominantly siliciclastic in nature, and the fifth contains the most voluminous basaltic lava flows of the planet. Maximum thicknesses are in the order of 6000 m (19,646 ft). The sequences are separated by basin wide unconformities related in the Paleozoic to Andean orogenic events and in the Mesozoic to the continental breakup and sea floor spreading between South America and Africa. The structural framework of the Parana basin consists of a remarkable pattern of criss-crossing linear features (faults, fault zones, arches) clustered into three major groups (N45/sup 0/-65/sup 0/W, N50/sup 0/-70/sup 0/E, E-W). The northwest- and northeast-trending faults are long-lived tectonic elements inherited from the Precambrian basement whose recurrent activity throughout the Phanerozoic strongly influenced sedimentation, facies distribution, and development of structures in the basin. Thermomechanical analyses indicate three main phases of subsidence (Silurian-Devonian, late Carboniferous-Permian, Late Jurassic-Early Cretaceous) and low geothermal gradients until the beginning of the Late Jurassic Permian oil-prone source rocks attained maturation due to extra heat originated from Juro-Cretaceous igneous intrusions. The third phase of subsidence also coincided with strong tectonic reactivation and creation of a third structural trend (east-west).

  4. Cdc48 and a ubiquitin ligase drive disassembly of the CMG helicase at the end of DNA replication

    PubMed Central

    De Piccoli, Giacomo; Labib, Karim

    2015-01-01

    Chromosome replication is initiated by a universal mechanism in eukaryotic cells, involving the assembly and activation at replication origins of the CMG (Cdc45-MCM-GINS) DNA helicase, which is essential for the progression of replication forks. Disassembly of CMG is likely to be a key regulated step at the end of chromosome replication, but the mechanism was unknown until now. Here we show that the ubiquitin ligase known as SCFDia2 promotes ubiquitylation of CMG during the final stages of chromosome replication in Saccharomyces cerevisiae. The Cdc48/p97 segregase then associates with ubiquitylated CMG, leading rapidly to helicase disassembly. These findings indicate that the end of chromosome replication in eukaryotes is controlled in a similarly complex fashion to the much-better-characterized initiation step. PMID:25342810

  5. Polygalacturonase Gene Expression in Ripe Melon Fruit Supports a Role for Polygalacturonase in Ripening-Associated Pectin Disassembly

    PubMed Central

    Hadfield, Kristen A.; Rose, Jocelyn K.C.; Yaver, Debbie S.; Berka, Randy M.; Bennett, Alan B.

    1998-01-01

    Ripening-associated pectin disassembly in melon is characterized by a decrease in molecular mass and an increase in the solubilization of polyuronide, modifications that in other fruit have been attributed to the activity of polygalacturonase (PG). Although it has been reported that PG activity is absent during melon fruit ripening, a mechanism for PG-independent pectin disassembly has not been positively identified. Here we provide evidence that pectin disassembly in melon (Cucumis melo) may be PG mediated. Three melon cDNA clones with significant homology to other cloned PGs were isolated from the rapidly ripening cultivar Charentais (C. melo cv Reticulatus F1 Alpha) and were expressed at high levels during fruit ripening. The expression pattern correlated temporally with an increase in pectin-degrading activity and a decrease in the molecular mass of cell wall pectins, suggesting that these genes encode functional PGs. MPG1 and MPG2 were closely related to peach fruit and tomato abscission zone PGs, and MPG3 was closely related to tomato fruit PG. MPG1, the most abundant melon PG mRNA, was expressed in Aspergillus oryzae. The culture filtrate exponentially decreased the viscosity of a pectin solution and catalyzed the linear release of reducing groups, suggesting that MPG1 encodes an endo-PG with the potential to depolymerize melon fruit cell wall pectin. Because MPG1 belongs to a group of PGs divergent from the well-characterized tomato fruit PG, this supports the involvement of a second class of PGs in fruit ripening-associated pectin disassembly. PMID:9625689

  6. Formation and Assembly-Disassembly Processes of ZnO Hexagonal Pyramids Driven by Dipolar and Excluded Volume Interactions

    SciTech Connect

    Yang, Ming; Sun, Kai; Kotov, Nicholas A.

    2010-01-20

    ZnO hexagonal pyramids were obtained in hydrophilic media without any traditional stabilizers (capping agents). The absence of a thick organic shell reducing the anisotropy of nanoparticle (NP) interactions, oxide nature of the materials, and new geometry of the nanocrystals makes possible the observation of new self-organization phenomena. Several new features not present in the previous cases of NP self-organization were identified and discussed. The formation of ZnO pyramids involved recrystallization of larger amorphous NPs followed by the multistage disassembly of intermediate aggregates into individual virtually perfectly shaped nanocrystals. The evolution of NPs begins with crystallization of clustered plates within the original amorphous spherical colloids, and then agglomerated truncated pyramids are formed. These agglomerates further transform into chained pyramids, which eventually separate from each other. The crystallization and disassembly processes can be associated with the decrease of potential and anisotropy of the attractive force field around the crystallites represented in part by dipole moments. The reassembly of the pyramids can still be attained via engaging excluded volume interaction after adding similarly charged polymer. Overall, in this system, we see the first examples of (1) coupled crystallization and disassembly process; (2) induced assembly of nanoscale particles using excluded volume interactions, which were previously used only for aggregation of microscale colloids; and (3) nanoparticle assemblies with variable and experimentally verifiable relative orientation of dipoles including head-to-tail, tail-to-tail pairs, and antiparallel chains. Described assemblies of ZnO pyramids with collective behavior of individual building blocks as well as distinct and experimentally controlled stages of assembly and disassembly present a fundamentally interesting nanoparticle system with rich dynamic behavior.

  7. Spent fuel disassembly hardware and other non-fuel bearing components: characterization, disposal cost estimates, and proposed repository acceptance requirements

    SciTech Connect

    Luksic, A.T.; McKee, R.W.; Daling, P.M.; Konzek, G.J.; Ludwick, J.D.; Purcell, W.L.

    1986-10-01

    There are two categories of waste considered in this report. The first is the spent fuel disassembly (SFD) hardware. This consists of the hardware remaining after the fuel pins have been removed from the fuel assembly. This includes end fittings, spacer grids, water rods (BWR) or guide tubes (PWR) as appropriate, and assorted springs, fasteners, etc. The second category is other non-fuel-bearing (NFB) components the DOE has agreed to accept for disposal, such as control rods, fuel channels, etc., under Appendix E of the standard utiltiy contract (10 CFR 961). It is estimated that there will be approximately 150 kg of SFD and NFB waste per average metric ton of uranium (MTU) of spent uranium. PWR fuel accounts for approximately two-thirds of the average spent-fuel mass but only 50 kg of the SFD and NFB waste, with most of that being spent fuel disassembly hardware. BWR fuel accounts for one-third of the average spent-fuel mass and the remaining 100 kg of the waste. The relatively large contribution of waste hardware in BWR fuel, will be non-fuel-bearing components, primarily consisting of the fuel channels. Chapters are devoted to a description of spent fuel disassembly hardware and non-fuel assembly components, characterization of activated components, disposal considerations (regulatory requirements, economic analysis, and projected annual waste quantities), and proposed acceptance requirements for spent fuel disassembly hardware and other non-fuel assembly components at a geologic repository. The economic analysis indicates that there is a large incentive for volume reduction.

  8. Photoreversible assembly-disassembly of a polymeric structure by using an azobenzene photoswitch and Al3+ ions.

    PubMed

    Hatai, Joydev; Bandyopadhyay, Subhajit

    2014-08-01

    A nonmacrocyclic azobenzene-based photochromic receptor in its E isomer forms an extended polymeric assembly with Al(3+) ions. Exposure of the E form to UV light at λ = 366 nm causes a disassembly of the polymeric structure due to the change in the molecular geometry of the ligand. The linear polymeric structure was regenerated on exposure to visible light. PMID:25044420

  9. D1 dopamine receptor stimulation impairs striatal proteasome activity in Parkinsonism through 26S proteasome disassembly.

    PubMed

    Barroso-Chinea, Pedro; Thiolat, Marie-Laure; Bido, Simone; Martinez, Audrey; Doudnikoff, Evelyne; Baufreton, Jérôme; Bourdenx, Mathieu; Bloch, Bertrand; Bezard, Erwan; Martin-Negrier, Marie-Laure

    2015-06-01

    Among the mechanisms underlying the development of L-dopa-induced dyskinesia (LID) in Parkinson's disease, complex alterations in dopamine signaling in D1 receptor (D1R)-expressing medium spiny striatal neurons have been unraveled such as, but not limited to, dysregulation of D1R expression, lateral diffusion, intraneuronal trafficking, subcellular localization and desensitization, leading to a pathological anchorage of D1R at the plasma membrane. Such anchorage is partly due to a decreased proteasomal activity that is specific of the L-dopa-exposed dopamine-depleted striatum, results from D1R activation and feeds-back the D1R exaggerated cell surface abundance. The precise mechanisms by which L-dopa affects striatal proteasome activity remained however unknown. We here show, in a series of in vitro ex vivo and in vivo models, that such rapid modulation of striatal proteasome activity intervenes through D1R-mediated disassembly of the 26S proteasome rather than change in transcription or translation of proteasome or proteasome subunits intraneuronal relocalization. PMID:25766677

  10. Actin cross-link assembly and disassembly mechanics for alpha-Actinin and fascin.

    PubMed

    Courson, David S; Rock, Ronald S

    2010-08-20

    Self-assembly of complex structures is commonplace in biology but often poorly understood. In the case of the actin cytoskeleton, a great deal is known about the components that include higher order structures, such as lamellar meshes, filopodial bundles, and stress fibers. Each of these cytoskeletal structures contains actin filaments and cross-linking proteins, but the role of cross-linking proteins in the initial steps of structure formation has not been clearly elucidated. We employ an optical trapping assay to investigate the behaviors of two actin cross-linking proteins, fascin and alpha-actinin, during the first steps of structure assembly. Here, we show that these proteins have distinct binding characteristics that cause them to recognize and cross-link filaments that are arranged with specific geometries. alpha-Actinin is a promiscuous cross-linker, linking filaments over all angles. It retains this flexibility after cross-links are formed, maintaining a connection even when the link is rotated. Conversely, fascin is extremely selective, only cross-linking filaments in a parallel orientation. Surprisingly, bundles formed by either protein are extremely stable, persisting for over 0.5 h in a continuous wash. However, using fluorescence recovery after photobleaching and fluorescence decay experiments, we find that the stable fascin population can be rapidly competed away by free fascin. We present a simple avidity model for this cross-link dissociation behavior. Together, these results place constraints on how cytoskeletal structures assemble, organize, and disassemble in vivo. PMID:20551315

  11. Histone Acetylation near the Nucleosome Dyad Axis Enhances Nucleosome Disassembly by RSC and SWI/SNF

    PubMed Central

    Chatterjee, Nilanjana; North, Justin A.; Dechassa, Mekonnen Lemma; Manohar, Mridula; Prasad, Rashmi; Luger, Karolin; Ottesen, Jennifer J.; Poirier, Michael G.

    2015-01-01

    Signaling associated with transcription activation occurs through posttranslational modification of histones and is best exemplified by lysine acetylation. Lysines are acetylated in histone tails and the core domain/lateral surface of histone octamers. While acetylated lysines in histone tails are frequently recognized by other factors referred to as “readers,” which promote transcription, the mechanistic role of the modifications in the lateral surface of the histone octamer remains unclear. By using X-ray crystallography, we found that acetylated lysines 115 and 122 in histone H3 are solvent accessible, but in biochemical assays they appear not to interact with the bromodomains of SWI/SNF and RSC to enhance recruitment or nucleosome mobilization, as previously shown for acetylated lysines in H3 histone tails. Instead, we found that acetylation of lysines 115 and 122 increases the predisposition of nucleosomes for disassembly by SWI/SNF and RSC up to 7-fold, independent of bromodomains, and only in conjunction with contiguous nucleosomes. Thus, in combination with SWI/SNF and RSC, acetylation of lateral surface lysines in the histone octamer serves as a crucial regulator of nucleosomal dynamics distinct from the histone code readers and writers. PMID:26416878

  12. Review: Progresses in understanding N-ethylmaleimide sensitive factor (NSF) mediated disassembly of SNARE complexes.

    PubMed

    Ryu, Je-Kyung; Jahn, Reinhard; Yoon, Tae-Young

    2016-08-01

    N-ethylmaleimide sensitive factor (NSF) is a key protein of intracellular membrane traffic. NSF is a highly conserved protein belonging to the ATPases associated with other activities (AAA+ proteins). AAA+ share common domains and all transduce ATP hydrolysis into major conformational movements that are used to carry out conformational work on client proteins. Together with its cofactor SNAP, NSF is specialized on disassembling highly stable SNARE complexes that form after each membrane fusion event. Although essential for all eukaryotic cells, however, the details of this reaction have long been enigmatic. Recently, major progress has been made in both elucidating the structure of NSF/SNARE complexes and in understanding the reaction mechanism. Advances in both cryo EM and single molecule measurements suggest that NSF, together with its cofactor SNAP, imposes a tight grip on the SNARE complex. After ATP hydrolysis and phosphate release, it then builds up mechanical tension that is ultimately used to rip apart the SNAREs in a single burst. Because the AAA domains are extremely well-conserved, the molecular mechanism elucidated for NSF is presumably shared by many other AAA+ ATPases. © 2016 Wiley Periodicals, Inc. Biopolymers 105: 518-531, 2016. PMID:27062050

  13. Subunit disassembly and inhibition of TNFα by a semi-synthetic bicyclic peptide

    PubMed Central

    Luzi, Stefan; Kondo, Yasushi; Bernard, Elise; Stadler, Lukas K. J.; Vaysburd, Marina; Winter, Greg; Holliger, Philipp

    2015-01-01

    Macrocyclic peptides are potentially a source of powerful drugs, but their de novo discovery remains challenging. Here we describe the discovery of a high-affinity (Kd = 10 nM) peptide macrocycle (M21) against human tumor necrosis factor-alpha (hTNFα), a key drug target in the treatment of inflammatory disorders, directly from diverse semi-synthetic phage peptide repertoires. The bicyclic peptide M21 (ACPPCLWQVLC) comprises two loops covalently anchored to a 2,4,6-trimethyl-mesitylene core and upon binding induces disassembly of the trimeric TNFα cytokine into dimers and monomers. A 2.9 Å crystal structure of the M21/hTNFα complex reveals the peptide bound to a hTNFα dimer at a normally buried epitope in the trimer interface overlapping the binding site of a previously discovered small molecule ligand (SPD304), which also induces TNF trimer dissociation and synergizes with M21 in the inhibition of TNFα cytotoxicity. The discovery of M21 underlines the potential of semi-synthetic bicyclic peptides as ligands for the discovery of cryptic epitopes, some of which are poorly accessible to antibodies. PMID:25614525

  14. Protein-triggered instant disassembly of biomimetic Layer-by-Layer films.

    PubMed

    Abdelkebir, Khalil; Gaudière, Fabien; Morin-Grognet, Sandrine; Coquerel, Gérard; Atmani, Hassan; Labat, Béatrice; Ladam, Guy

    2011-12-01

    Layer-by-Layer (LbL) coatings are promising tools for the biofunctionalization of biomaterials, as they allow stress-free immobilization of proteins. Here, we explore the possibility to immobilize phosvitin, a highly phosphorylated protein viewed as a model of bone phosphoproteins and, as such, a potential promotive agent of surface-directed biomineralization, into biomimetic LbL architectures. Two immobilization protocols are attempted, first, using phosvitin as the polyanionic component of phosvitin/poly-(L-lysine) films and, second, adsorbing it onto preformed chondroitin sulfate/poly-(L-lysine) films. Surprisingly, it is neither possible to embed phosvitin as the constitutive polyanion of the LbL architectures nor to adsorb it atop preformed films. Instead, phosvitin triggers instant massive film disassembly. This unexpected, incidentally detected behavior constitutes the first example of destructive interactions between LbL films and a third polyelectrolyte, a fortiori a protein, which might open a route toward new stimuli-responsive films for biosensing or drug delivery applications. Interestingly, additional preliminary results still indicate a promotive effect of phosvitin-containing remnant films on calcium phosphate deposition. PMID:22007998

  15. Green design "bioinspired disassembly-reassembly strategy" applied for improved tumor-targeted anticancer drug delivery.

    PubMed

    Wang, Ruoning; Gu, Xiaochen; Zhou, Jianping; Shen, Lingjia; Yin, Lifang; Hua, Peiying; Ding, Yang

    2016-08-10

    In this study, a simple and green approach 'bioinspired disassembly-reassembly strategy' was employed to reconstitute lipoprotein nanoparticles (RLNs) using whole-components of endogenous ones (contained dehydrated human lipids and native apolipoproteins). These RLNs were engineered to mimic the configuration and properties of natural lipoproteins for efficient drug delivery. In testing therapeutic targeting to microtubules, paclitaxel (PTX) was reassembled into RLNs to achieve improved targeted anti-carcinoma treatment and minimize adverse effects, demonstrating ultimately more applicable than HDL-like particles which are based on exogenous lipid sources. We have characterized that apolipoprotein-decoration of PTX-loaded RLNs (RLNs-PTX) led to favoring uniformly dispersed distribution, increasing PTX-encapsulation with a sustained-release pattern, while enhancing biostability during blood circulation. The innate biological RLNs induced efficient intracellular trafficking of cargos in situ via multi-targeting mechanisms, including scavenger receptor class B type I (SR-BI)-mediated direct transmembrane delivery, as well as other lipoprotein-receptors associated endocytic pathways. The resulting anticancer treatment from RLNs-PTX was demonstrated a half-maximal inhibitory concentration of 0.20μg/mL, cell apoptosis of 18.04% 24h post-incubation mainly arresting G2/M cell cycle in vitro, and tumor weight inhibition of 70.51% in vivo. Collectively, green-step assembly-based RLNs provided an efficient strategy for mediating tumor-targeted accumulation of PTX and enhanced anticancer efficacy. PMID:27238442

  16. Histone Acetylation near the Nucleosome Dyad Axis Enhances Nucleosome Disassembly by RSC and SWI/SNF.

    PubMed

    Chatterjee, Nilanjana; North, Justin A; Dechassa, Mekonnen Lemma; Manohar, Mridula; Prasad, Rashmi; Luger, Karolin; Ottesen, Jennifer J; Poirier, Michael G; Bartholomew, Blaine

    2015-12-01

    Signaling associated with transcription activation occurs through posttranslational modification of histones and is best exemplified by lysine acetylation. Lysines are acetylated in histone tails and the core domain/lateral surface of histone octamers. While acetylated lysines in histone tails are frequently recognized by other factors referred to as "readers," which promote transcription, the mechanistic role of the modifications in the lateral surface of the histone octamer remains unclear. By using X-ray crystallography, we found that acetylated lysines 115 and 122 in histone H3 are solvent accessible, but in biochemical assays they appear not to interact with the bromodomains of SWI/SNF and RSC to enhance recruitment or nucleosome mobilization, as previously shown for acetylated lysines in H3 histone tails. Instead, we found that acetylation of lysines 115 and 122 increases the predisposition of nucleosomes for disassembly by SWI/SNF and RSC up to 7-fold, independent of bromodomains, and only in conjunction with contiguous nucleosomes. Thus, in combination with SWI/SNF and RSC, acetylation of lateral surface lysines in the histone octamer serves as a crucial regulator of nucleosomal dynamics distinct from the histone code readers and writers. PMID:26416878

  17. ARC: A compact, high-field, disassemblable fusion nuclear science facility and demonstration power plant

    NASA Astrophysics Data System (ADS)

    Sorbom, Brandon; Ball, Justin; Palmer, Timothy; Mangiarotti, Franco; Sierchio, Jennifer; Bonoli, Paul; Kasten, Cale; Sutherland, Derek; Barnard, Harold; Haakonsen, Christian; Goh, Jon; Sung, Choongki; Whyte, Dennis

    2014-10-01

    The Affordable, Robust, Compact (ARC) reactor conceptual design aims to reduce the size, cost, and complexity of a combined Fusion Nuclear Science Facility (FNSF) and demonstration fusion pilot power plant. ARC is a 270 MWe tokamak reactor with a major radius of 3.3 m, a minor radius of 1.1 m, and an on-axis magnetic field of 9.2 T. ARC has Rare Earth Barium Copper Oxide (REBCO) superconducting toroidal field coils with joints to allow disassembly, allowing for removal and replacement of the vacuum vessel as a single component. Inboard-launched current drive of 25 MW LHRF power and 13.6 MW ICRF power is used to provide a robust, steady state core plasma far from disruptive limits. ARC uses an all-liquid blanket, consisting of low pressure, slowly flowing Fluorine Lithium Beryllium (FLiBe) molten salt. The liquid blanket acts as a working fluid, coolant, and tritium breeder, and minimizes the solid material that can become activated. The large temperature range over which FLiBe is liquid permits blanket operation at 800-900 K with single phase fluid cooling and allows use of a high-efficiency Brayton cycle for electricity production in the secondary coolant loop.

  18. Catalytic Molecular Imaging of MicroRNA in Living Cells by DNA-Programmed Nanoparticle Disassembly.

    PubMed

    He, Xuewen; Zeng, Tao; Li, Zhi; Wang, Ganglin; Ma, Nan

    2016-02-24

    Molecular imaging is an essential tool for disease diagnostics and treatment. Direct imaging of low-abundance nucleic acids in living cells remains challenging because of the relatively low sensitivity and insufficient signal-to-background ratio of conventional molecular imaging probes. Herein, we report a class of DNA-templated gold nanoparticle (GNP)-quantum dot (QD) assembly-based probes for catalytic imaging of cancer-related microRNAs (miRNA) in living cells with signal amplification capacity. We show that a single miRNA molecule could catalyze the disassembly of multiple QDs with the GNP through a DNA-programmed thermodynamically driven entropy gain process, yielding significantly amplified QD photoluminescence (PL) for miRNA imaging. By combining the robust PL of QDs with the catalytic amplification strategy, three orders of magnitude improvement in detection sensitivity is achieved in comparison with non-catalytic imaging probe, which enables facile and accurate differentiation between cancer cells and normal cells by miRNA imaging in living cells. PMID:26694689

  19. Viral capsids: Kinetics of assembly under transient conditions and kinetics of disassembly

    NASA Astrophysics Data System (ADS)

    Zhdanov, Vladimir P.

    2014-10-01

    The available kinetic models of assembly of viral protein capsids are focused primarily on the situations in vitro where the amount of protein is fixed. In vivo, however, the viral protein synthesis and capsid assembly occur under transient conditions in parallel with viral genome replication. Herein, a kinetic model describing the latter case of capsid assembly is proposed with emphasis on the period corresponding to the initial stage of viral genome replication. The analysis is aimed at small icosahedral capsids. With biologically reasonable values of model parameters, the model predicts rapid exponential growth of the populations of monomers and fully assembled capsids during the transient period of genome replication. Under the subsequent steady-state conditions with respect to replication, the monomer population is predicted to be nearly constant while the number of fully assembled capsids increases linearly. The kinetics of capsid disassembly, described briefly as well under conditions of negligible monomer concentration, exhibit a short induction period when the number of proteins in a capsid is only slightly smaller than in the beginning, followed by more rapid protein detachment. According to calculations, the latter kinetics may strongly depend on protein degradation.

  20. QIL1 mutation causes MICOS disassembly and early onset fatal mitochondrial encephalopathy with liver disease.

    PubMed

    Guarani, Virginia; Jardel, Claude; Chrétien, Dominique; Lombès, Anne; Bénit, Paule; Labasse, Clémence; Lacène, Emmanuelle; Bourillon, Agnès; Imbard, Apolline; Benoist, Jean-François; Dorboz, Imen; Gilleron, Mylène; Goetzman, Eric S; Gaignard, Pauline; Slama, Abdelhamid; Elmaleh-Bergès, Monique; Romero, Norma B; Rustin, Pierre; Ogier de Baulny, Hélène; Paulo, Joao A; Harper, J Wade; Schiff, Manuel

    2016-01-01

    Previously, we identified QIL1 as a subunit of mitochondrial contact site (MICOS) complex and demonstrated a role for QIL1 in MICOS assembly, mitochondrial respiration, and cristae formation critical for mitochondrial architecture (Guarani et al., 2015). Here, we identify QIL1 null alleles in two siblings displaying multiple clinical symptoms of early-onset fatal mitochondrial encephalopathy with liver disease, including defects in respiratory chain function in patient muscle. QIL1 absence in patients' fibroblasts was associated with MICOS disassembly, abnormal cristae, mild cytochrome c oxidase defect, and sensitivity to glucose withdrawal. QIL1 expression rescued cristae defects, and promoted re-accumulation of MICOS subunits to facilitate MICOS assembly. MICOS assembly and cristae morphology were not efficiently rescued by over-expression of other MICOS subunits in patient fibroblasts. Taken together, these data provide the first evidence of altered MICOS assembly linked with a human mitochondrial disease and confirm a central role for QIL1 in stable MICOS complex formation. PMID:27623147

  1. Role of a reducing environment in disassembly of the herpesvirus tegument

    SciTech Connect

    Newcomb, William W.; Jones, Lisa M.; Dee, Alexander; Chaudhry, Farid; Brown, Jay C.

    2012-09-15

    Initiation of infection by herpes family viruses involves a step in which most of the virus tegument becomes detached from the capsid. Detachment takes place in the host cell cytosol near the virus entry site and it is followed by dispersal of tegument proteins and disappearance of the tegument as a distinct entity. Here we describe the results of experiments designed to test the idea that the reducing environment of the cytosol may contribute to tegument detachment and disassembly. Non-ionic detergent was used to remove the membrane of purified herpes simplex virus under control and reducing conditions. The effects on the tegument were then examined by SDS-PAGE and electron microscopy. Protein analysis demonstrated that most major tegument proteins were removed under both oxidizing and reducing conditions except for UL49 which required a reducing environment. It is proposed therefore that the reducing conditions in the cytosol are involved in removal of UL49 protein. Electron microscopic analysis revealed that capsids produced under oxidizing conditions contained a coating of protein that was absent in reduced virions and which correlated uniquely with the presence of UL49. This capsid-associated layer is suggested to be the location of UL49 in the extracted virion.

  2. Disassembly activity of actin-depolymerizing factor (ADF) is associated with distinct cellular processes in apicomplexan parasites

    PubMed Central

    Haase, Silvia; Zimmermann, Dennis; Olshina, Maya A.; Wilkinson, Mark; Fisher, Fabio; Tan, Yan Hong; Stewart, Rebecca J.; Tonkin, Christopher J.; Wong, Wilson; Kovar, David R.; Baum, Jake

    2015-01-01

    Proteins of the actin-depolymerizing factor (ADF)/cofilin family have been shown to be crucial for the motility and survival of apicomplexan parasites. However, the mechanisms by which ADF proteins fulfill their function remain poorly understood. In this study, we investigate the comparative activities of ADF proteins from Toxoplasma gondii and Plasmodium falciparum, the human malaria parasite, using a conditional T. gondii ADF-knockout line complemented with ADF variants from either species. We show that P. falciparum ADF1 can fully restore native TgADF activity, demonstrating functional conservation between parasites. Strikingly, mutation of a key basic residue (Lys-72), previously implicated in disassembly in PfADF1, had no detectable phenotypic effect on parasite growth, motility, or development. In contrast, organelle segregation was severely impaired when complementing with a TgADF mutant lacking the corresponding residue (Lys-68). Biochemical analyses of each ADF protein confirmed the reduced ability of lysine mutants to mediate actin depolymerization via filament disassembly although not severing, in contrast to previous reports. These data suggest that actin filament disassembly is essential for apicomplexan parasite development but not for motility, as well as pointing to genus-specific coevolution between ADF proteins and their native actin. PMID:26157165

  3. Disassembly activity of actin-depolymerizing factor (ADF) is associated with distinct cellular processes in apicomplexan parasites.

    PubMed

    Haase, Silvia; Zimmermann, Dennis; Olshina, Maya A; Wilkinson, Mark; Fisher, Fabio; Tan, Yan Hong; Stewart, Rebecca J; Tonkin, Christopher J; Wong, Wilson; Kovar, David R; Baum, Jake

    2015-09-01

    Proteins of the actin-depolymerizing factor (ADF)/cofilin family have been shown to be crucial for the motility and survival of apicomplexan parasites. However, the mechanisms by which ADF proteins fulfill their function remain poorly understood. In this study, we investigate the comparative activities of ADF proteins from Toxoplasma gondii and Plasmodium falciparum, the human malaria parasite, using a conditional T. gondii ADF-knockout line complemented with ADF variants from either species. We show that P. falciparum ADF1 can fully restore native TgADF activity, demonstrating functional conservation between parasites. Strikingly, mutation of a key basic residue (Lys-72), previously implicated in disassembly in PfADF1, had no detectable phenotypic effect on parasite growth, motility, or development. In contrast, organelle segregation was severely impaired when complementing with a TgADF mutant lacking the corresponding residue (Lys-68). Biochemical analyses of each ADF protein confirmed the reduced ability of lysine mutants to mediate actin depolymerization via filament disassembly although not severing, in contrast to previous reports. These data suggest that actin filament disassembly is essential for apicomplexan parasite development but not for motility, as well as pointing to genus-specific coevolution between ADF proteins and their native actin. PMID:26157165

  4. Hsc70-induced Changes in Clathrin-Auxilin Cage Structure Suggest a Role for Clathrin Light Chains in Cage Disassembly

    PubMed Central

    Young, Anna; Stoilova-McPhie, Svetla; Rothnie, Alice; Vallis, Yvonne; Harvey-Smith, Phillip; Ranson, Neil; Kent, Helen; Brodsky, Frances M; Pearse, Barbara M F; Roseman, Alan; Smith, Corinne J

    2013-01-01

    The molecular chaperone, Hsc70, together with its co-factor, auxilin, facilitates the ATP-dependent removal of clathrin during clathrin-mediated endocytosis in cells. We have used cryo-electron microscopy to determine the 3D structure of a complex of clathrin, auxilin401-910 and Hsc70 at pH 6 in the presence of ATP, frozen within 20 seconds of adding Hsc70 in order to visualize events that follow the binding of Hsc70 to clathrin and auxilin before clathrin disassembly. In this map, we observe density beneath the vertex of the cage that we attribute to bound Hsc70. This density emerges asymmetrically from the clathrin vertex, suggesting preferential binding by Hsc70 for one of the three possible sites at the vertex. Statistical comparison with a map of whole auxilin and clathrin previously published by us reveals the location of statistically significant differences which implicate involvement of clathrin light chains in structural rearrangements which occur after Hsc70 is recruited. Clathrin disassembly assays using light scattering suggest that loss of clathrin light chains reduces the efficiency with which auxilin facilitates this reaction. These data support a regulatory role for clathrin light chains in clathrin disassembly in addition to their established role in regulating clathrin assembly. PMID:23710728

  5. Ipl1/Aurora B kinase coordinates synaptonemal complex disassembly with cell cycle progression and crossover formation in budding yeast meiosis

    PubMed Central

    Jordan, Philip; Copsey, Alice; Newnham, Louise; Kolar, Elizabeth; Lichten, Michael; Hoffmann, Eva

    2009-01-01

    Several protein kinases collaborate to orchestrate and integrate cellular and chromosomal events at the G2/M transition in both mitotic and meiotic cells. During the G2/M transition in meiosis, this includes the completion of crossover recombination, spindle formation, and synaptonemal complex (SC) breakdown. We identified Ipl1/Aurora B kinase as the main regulator of SC disassembly. Mutants lacking Ipl1 or its kinase activity assemble SCs with normal timing, but fail to dissociate the central element component Zip1, as well as its binding partner, Smt3/SUMO, from chromosomes in a timely fashion. Moreover, lack of Ipl1 activity causes delayed SC disassembly in a cdc5 as well as a CDC5-inducible ndt80 mutant. Crossover levels in the ipl1 mutant are similar to those observed in wild type, indicating that full SC disassembly is not a prerequisite for joint molecule resolution and subsequent crossover formation. Moreover, expression of meiosis I and meiosis II-specific B-type cyclins occur normally in ipl1 mutants, despite delayed formation of anaphase I spindles. These observations suggest that Ipl1 coordinates changes to meiotic chromosome structure with resolution of crossovers and cell cycle progression at the end of meiotic prophase. PMID:19759266

  6. Kinetics of Assembly and Dis-assembly of Structures Forming a Chromonic Liquid Crystal at Low Concentrations

    NASA Astrophysics Data System (ADS)

    Nieser, Kenneth; Collings, Peter

    2013-03-01

    The molecules of the near-IR absorbing dye IR-806 spontaneously assemble in water at very low concentrations, forming a chromonic liquid crystal phase at room temperature when the concentration is above 0.5 wt%. The assembly process proceeds in two steps and results in a complex structure that orientationally orders in a liquid crystal phase. The kinetics of the assembly and dis-assembly of these complex structures can be followed through absorption measurements by rapidly mixing the initial sample with either a small fraction of salt solution (assembly) or a large fraction of water (dis-assembly). The kinetics of dis-assembly is exponential while the kinetics of assembly is non-exponential, both with rate constants depending on the starting and ending conditions, but falling in the 0.1-1.0 s-1 range. While past equilibrium absorption measurements on IR-806 offer evidence for a threshold concentration for the assembly of these complex structures, the kinetics experiments show with certainty the existence of such a threshold. Similar experiments on Benzopurpurin 4B, another dye that forms a chromonic liquid crystal at low concentrations, reveal kinetics that are slower by two orders of magnitude and a threshold concentration for the assembly of complex structures. Acknowledgment is made to the donors of the American Chemical Society Petroleum Research Fund for partial support of this research.

  7. Arp2/3 complex ATP hydrolysis promotes lamellipodial actin network disassembly but is dispensable for assembly

    PubMed Central

    Ingerman, Elena; Hsiao, Jennifer Ying

    2013-01-01

    We examined the role of ATP hydrolysis by the Arp2/3 complex in building the leading edge of a cell by studying the effects of hydrolysis defects on the behavior of the complex in the lamellipodial actin network of Drosophila S2 cells and in a reconstituted, in vitro, actin-based motility system. In S2 cells, nonhydrolyzing Arp2 and Arp3 subunits expanded and delayed disassembly of lamellipodial actin networks and the effect of mutant subunits was additive. Arp2 and Arp3 ATP hydrolysis mutants remained in lamellipodial networks longer and traveled greater distances from the plasma membrane, even in networks still containing wild-type Arp2/3 complex. In vitro, wild-type and ATP hydrolysis mutant Arp2/3 complexes each nucleated actin and built similar dendritic networks. However, networks constructed with Arp2/3 hydrolysis-defective mutants were more resistant to disassembly by cofilin. Our results indicate that ATP hydrolysis on both Arp2 and Arp3 contributes to dissociation of the complex from the actin network but is not strictly necessary for lamellipodial network disassembly. PMID:23439681

  8. Negative pressure induces p120-catenin-dependent adherens junction disassembly in keratinocytes during wound healing.

    PubMed

    Huang, Ching-Hui; Hsu, Chih-Chin; Chen, Carl Pai-Chu; Chow, Shu-Er; Wang, Jong-Shyan; Shyu, Yu-Chiau; Lu, Mu-Jie

    2016-09-01

    A negative-pressure of 125mmHg (NP) has been widely used to treat chronic wounds in modern medicine. Keratinocytes under NP treatment have shown accelerated cell movement and decreased E-cadherin expression. However, the molecular mechanism of E-cadherin regulation under NP remains incompletely understood. Therefore, we investigated the E-cadherin regulation in keratinocytes (HaCaT cells) under NP. HaCaT cells were treated at ambient pressure (AP) and NP for 12h. Cell movement was measured by traditional and electric wound healing assays at the 2 different pressures. Mutants with overexpression of p120-catenin (p120(ctn)) were used to observe the effect of NP on p120(ctn) and E-cadherin expression during wound healing. Cell fractionation and immunoblotting data showed that NP increased Y228-phosphorylated p120(ctn) level and resulted in the translocation of p120(ctn) from the plasma membrane to cytoplasm. Immunofluorescence images revealed that NP decreased the co-localization of p120(ctn) and E-cadherin on the plasma membrane. Knockdown of p120(ctn) reduced E-cadherin expression and accelerated cell movement under AP. Overexpression of the Y228-phosphorylation-mimic p120(ctn) decreased E-cadherin membrane expression under both AP and NP. Phosphorylation-deficient mutants conferred restored adherens junctions (AJs) under NP. The Src inhibitor blocked the phosphorylation of p120(ctn) and impeded cell migration under NP. In conclusion, Src-dependent phosphorylation of p120(ctn) can respond rapidly to NP and contribute to E-cadherin downregulation. The NP-induced disassembly of the AJ further accelerates wound healing. PMID:27220534

  9. The effect of multivalent cations and Tau on paclitaxel-stabilized microtubule assembly, disassembly, and structure.

    PubMed

    Safinya, Cyrus R; Chung, Peter J; Song, Chaeyeon; Li, Youli; Ewert, Kai K; Choi, Myung Chul

    2016-06-01

    In this review we describe recent studies directed at understanding the formation of novel nanoscale assemblies in biological materials systems. In particular, we focus on the effects of multivalent cations, and separately, of microtubule-associated protein (MAP) Tau, on microtubule (MT) ordering (bundling), MT disassembly, and MT structure. Counter-ion directed bundling of paclitaxel-stabilized MTs is a model electrostatic system, which parallels efforts to understand MT bundling by intrinsically disordered proteins (typically biological polyampholytes) expressed in neurons. We describe studies, which reveal an unexpected transition from tightly spaced MT bundles to loose bundles consisting of strings of MTs as the valence of the cationic counter-ion decreases from Z=3 to Z=2. This transition is not predicted by any current theories of polyelectrolytes. Notably, studies of a larger series of divalent counter-ions reveal strong ion specific effects. Divalent counter-ions may either bundle or depolymerize paclitaxel-stabilized MTs. The ion concentration required for depolymerization decreases with increasing atomic number. In a more biologically related system we review synchrotron small angle x-ray scattering (SAXS) studies on the effect of the Tau on the structure of paclitaxel-stabilized MTs. The electrostatic binding of MAP Tau isoforms leads to an increase in the average radius of microtubules with increasing Tau coverage (i.e. a re-distribution of protofilament numbers in MTs). Finally, inspired by MTs as model nanotubes, we briefly describe other more robust lipid-based cylindrical nanostructures, which may have technological applications, for example, in drug encapsulation and delivery. PMID:26684364

  10. p31comet promotes disassembly of the mitotic checkpoint complex in an ATP-dependent process

    PubMed Central

    Teichner, Adar; Eytan, Esther; Sitry-Shevah, Danielle; Miniowitz-Shemtov, Shirly; Dumin, Elena; Gromis, Jonathan; Hershko, Avram

    2011-01-01

    Accurate segregation of chromosomes in mitosis is ensured by a surveillance mechanism called the mitotic (or spindle assembly) checkpoint. It prevents sister chromatid separation until all chromosomes are correctly attached to the mitotic spindle through their kinetochores. The checkpoint acts by inhibiting the anaphase-promoting complex/cyclosome (APC/C), a ubiquitin ligase that targets for degradation securin, an inhibitor of anaphase initiation. The activity of APC/C is inhibited by a mitotic checkpoint complex (MCC), composed of the APC/C activator Cdc20 bound to the checkpoint proteins MAD2, BubR1, and Bub3. When all kinetochores acquire bipolar attachment the checkpoint is inactivated, but the mechanisms of checkpoint inactivation are not understood. We have previously observed that hydrolyzable ATP is required for exit from checkpoint-arrested state. In this investigation we examined the possibility that ATP hydrolysis in exit from checkpoint is linked to the action of the Mad2-binding protein p31comet in this process. It is known that p31comet prevents the formation of a Mad2 dimer that it thought to be important for turning on the mitotic checkpoint. This explains how p31comet blocks the activation of the checkpoint but not how it promotes its inactivation. Using extracts from checkpoint-arrested cells and MCC isolated from such extracts, we now show that p31comet causes the disassembly of MCC and that this process requires β,γ-hydrolyzable ATP. Although p31comet binds to Mad2, it promotes the dissociation of Cdc20 from BubR1 in MCC. PMID:21300909

  11. Antofine-induced connexin43 gap junction disassembly in rat astrocytes involves protein kinase Cβ.

    PubMed

    Huang, Yu-Fang; Liao, Chih-Kai; Lin, Jau-Chen; Jow, Guey-Mei; Wang, Hwai-Shi; Wu, Jiahn-Chun

    2013-03-01

    Antofine, a phenanthroindolizidine alkaloid derived from Cryptocaryachinensis and Ficusseptica in the Asclepiadaceae milkweed family, is cytotoxic for various cancer cell lines. In this study, we demonstrated that treatment of rat primary astrocytes with antofine induced dose-dependent inhibition of gap junction intercellular communication (GJIC), as assessed by scrape-loading 6-carboxyfluorescein dye transfer. Levels of Cx43 protein were also decreased in a dose- and time-dependent manner following antofine treatment. Double-labeling immunofluorescence microscopy showed that antofine (10ng/ml) induced endocytosis of surface gap junctions into the cytoplasm, where Cx43 was co-localized with the early endosome marker EEA1. Inhibition of lysosomes or proteasomes by co-treatment with antofine and their respective specific inhibitors, NH4Cl or MG132, partially inhibited the antofine-induced decrease in Cx43 protein levels, but did not inhibit the antofine-induced inhibition of GJIC. After 30min of treatment, antofine induced a rapid increase in the intracellular Ca(2+) concentration and activation of protein kinase C (PKC)α/βII, which was maintained for at least 6h. Co-treatment of astrocytes with antofine and the intracellular Ca(2+) chelator BAPTA-AM prevented downregulation of Cx43 and inhibition of GJIC. Moreover, co-treatment with antofine and a specific PKCβ inhibitor prevented endocytosis of gap junctions, downregulation of Cx43, and inhibition of GJIC. Taken together, these findings indicate that antofine induces Cx43 gap junction disassembly by the PKCβ signaling pathway. Inhibition of GJIC by antofine may undermine the neuroprotective effect of astrocytes in CNS. PMID:23403203

  12. Disassembling bacterial extracellular matrix with DNase-coated nanoparticles to enhance antibiotic delivery in biofilm infections.

    PubMed

    Baelo, Aida; Levato, Riccardo; Julián, Esther; Crespo, Anna; Astola, José; Gavaldà, Joan; Engel, Elisabeth; Mateos-Timoneda, Miguel Angel; Torrents, Eduard

    2015-07-10

    Infections caused by biofilm-forming bacteria are a major threat to hospitalized patients and the main cause of chronic obstructive pulmonary disease and cystic fibrosis. There is an urgent necessity for novel therapeutic approaches, since current antibiotic delivery fails to eliminate biofilm-protected bacteria. In this study, ciprofloxacin-loaded poly(lactic-co-glycolic acid) nanoparticles, which were functionalized with DNase I, were fabricated using a green-solvent based method and their antibiofilm activity was assessed against Pseudomonas aeruginosa biofilms. Such nanoparticles constitute a paradigm shift in biofilm treatment, since, besides releasing ciprofloxacin in a controlled fashion, they are able to target and disassemble the biofilm by degrading the extracellular DNA that stabilize the biofilm matrix. These carriers were compared with free-soluble ciprofloxacin, and ciprofloxacin encapsulated in untreated and poly(lysine)-coated nanoparticles. DNase I-activated nanoparticles were not only able to prevent biofilm formation from planktonic bacteria, but they also successfully reduced established biofilm mass, size and living cell density, as observed in a dynamic environment in a flow cell biofilm assay. Moreover, repeated administration over three days of DNase I-coated nanoparticles encapsulating ciprofloxacin was able to reduce by 95% and then eradicate more than 99.8% of established biofilm, outperforming all the other nanoparticle formulations and the free-drug tested in this study. These promising results, together with minimal cytotoxicity as tested on J774 macrophages, allow obtaining novel antimicrobial nanoparticles, as well as provide clues to design the next generation of drug delivery devices to treat persistent bacterial infections. PMID:25913364

  13. Preparation of Segmented Microtubules to Study Motions Driven by the Disassembling Microtubule Ends

    PubMed Central

    Volkov, Vladimir A.; Zaytsev, Anatoly V.; Grishchuk, Ekaterina L.

    2014-01-01

    Microtubule depolymerization can provide force to transport different protein complexes and protein-coated beads in vitro. The underlying mechanisms are thought to play a vital role in the microtubule-dependent chromosome motions during cell division, but the relevant proteins and their exact roles are ill-defined. Thus, there is a growing need to develop assays with which to study such motility in vitro using purified components and defined biochemical milieu. Microtubules, however, are inherently unstable polymers; their switching between growth and shortening is stochastic and difficult to control. The protocols we describe here take advantage of the segmented microtubules that are made with the photoablatable stabilizing caps. Depolymerization of such segmented microtubules can be triggered with high temporal and spatial resolution, thereby assisting studies of motility at the disassembling microtubule ends. This technique can be used to carry out a quantitative analysis of the number of molecules in the fluorescently-labeled protein complexes, which move processively with dynamic microtubule ends. To optimize a signal-to-noise ratio in this and other quantitative fluorescent assays, coverslips should be treated to reduce nonspecific absorption of soluble fluorescently-labeled proteins. Detailed protocols are provided to take into account the unevenness of fluorescent illumination, and determine the intensity of a single fluorophore using equidistant Gaussian fit. Finally, we describe the use of segmented microtubules to study microtubule-dependent motions of the protein-coated microbeads, providing insights into the ability of different motor and nonmotor proteins to couple microtubule depolymerization to processive cargo motion. PMID:24686554

  14. Probability of Liquefaction for Pit Disassembly and Conversion Facility (PDCF) Site, Savannah River Site

    SciTech Connect

    Lee, R.C.

    2003-09-30

    This report documents the probability of liquefaction (POL) for the Pit Disassembly and Conversion Facility (PDCF). The procedure for analysis of a critical layer of interest requires the following basic steps: (1) establish the probability of occurrence (POO) of ranges of 2.5 Hz bedrock motion based on a probabilistic seismic hazard assessment (PSHA); (2) define the critical layer that may be susceptible to liquefaction; (3) estimate distributions of cyclic stress ratio (CSR) (i.e., seismic demand) for the critical layer using site-specific soil properties corresponding to the bedrock motions; (4) estimate capacity of the critical layer based on site-specific cone penetration test (CPT) soundings and standard penetration test (SPT) blowcount data; and (5) sum the probability of liquefaction for each range of bedrock motion using empirical data correlating demand and capacity with liquefaction. The soil layer most susceptible to liquefaction is the critical layer. The critical layer is characterized by relatively low blowcount and low fines content and is established from soil layers below the water table. A key component for seismic demand is the establishment of the soil profile and it's uncertainty. The PDCF site is consistent with the 1997 SRS-specific model used to compute the site amplification database. Thus, previously derived site amplification functions reflecting the uncertainty in site properties and stratigraphy can be used to predict distributions of CSR given a specific earthquake magnitude and level of bedrock motion. The previously developed site amplification database reflects uncertainty in site response based on the large database of site shear-wave velocity profiles. Consequently, for each level of bedrock motion (from the PSHA) the site amplification database is used to establish the distribution of the expected CSR (demand) in the critical layer.

  15. Automated High-Content Screening for Compounds That Disassemble the Perinucleolar Compartment

    PubMed Central

    Norton, John T.; Titus, Steven A.; Dexter, Dwayne; Austin, Christopher P.; Zheng, Wei; Huang, Sui

    2010-01-01

    All solid malignancies share characteristic traits, including unlimited cellular proliferation, evasion of immune regulation, and the propensity to metastasize. The authors have previously described that a subnuclear structure, the perinucleolar compartment (PNC), is associated with the metastatic phenotype in solid tumor cancer cells. The percentage of cancer cells that contain PNCs (PNC prevalence) is indicative of the malignancy of a tumor both in vitro and in vivo, and thus PNC prevalence is a marker that reflects metastatic capability in a population of tumor cells. Although the function of the PNC remains to be determined, the PNC is highly enriched with small RNAs and RNA binding proteins. The initial chemical biology studies using a set of anticancer drugs that disassemble PNCs revealed a direct association of the structure with DNA. Therefore, PNC prevalence reduction as a phenotypic marker can be used to identify compounds that target cellular processes required for PNC maintenance and hence used to elucidate the nature of the PNC function. Here the authors report the development of an automated high-content screening assay that is capable of detecting PNC prevalence in prostate cancer cells (PC-3M) stably expressing a green fluorescent protein (GFP)–fusion protein that localizes to the PNC. The assay was optimized using known PNC-reducing drugs and non-PNC-reducing cytotoxic drugs. After optimization, the fidelity of the assay was probed with a collection of 8284 compounds and was shown to be robust and capable of detecting known and novel PNC-reducing compounds, making it the first reported high-content phenotypic screen for small changes in nuclear structure. PMID:19762548

  16. Macromolecular crowding favors the fibrillization of β2-microglobulin by accelerating the nucleation step and inhibiting fibril disassembly.

    PubMed

    Luo, Xu-Dong; Kong, Fan-Lou; Dang, Hai-Bin; Chen, Jie; Liang, Yi

    2016-11-01

    Hemodialysis-associated amyloidosis (HAA) involves the fibrillization of β2-microglobulin (β2M) and occurs in crowded physiological environments. However, how macromolecular crowding affects amyloid formation of β2M remains elusive. Here we study the effects of macromolecular crowding on amyloid formation and fibril disassembly of wild-type human β2M and its pathogenic mutant ΔN6. At strongly acidic pH2.5, the presence of a strong crowding agent (Ficoll 70 or dextran 70) not only dramatically accelerates the fibrillization of both wild-type β2M and its ΔN6 variant by reducing the lag time to a large extent, indicating the acceleration of the nucleation phase, but also remarkably increases the amount of β2M fibrils. At weakly acidic pH6.2, such an enhancing effect of macromolecular crowding on fibril formation is only observed for pathogenic mutant ΔN6, but not for wild-type β2M which does not form amyloid fibrils in the absence and presence of a crowding agent. Thus, we propose that the monomers of β2M form the nuclei, which is enhanced by macromolecular crowding, followed by the step of fibril elongation. Furthermore, at physiological pH, macromolecular crowding remarkably inhibits β2M fibril disassembly by decreasing rate constants corresponding to fast and slow stages of fibril disaggregation. Our data demonstrate that macromolecular crowding favors the fibrillization of β2M by accelerating the nucleation step and inhibiting fibril disassembly. Our findings provide clear evidence for the pathology of HAA that macromolecular crowding should be taken into account. PMID:27481166

  17. Sequence-defined Energetic Shifts Control the Disassembly Kinetics and Microstructure of Amelogenin Adsorbed onto Hydroxyapatite (100)

    SciTech Connect

    Tao, Jinhui; Buchko, Garry W.; Shaw, Wendy J.; De Yoreo, Jim; Tarasevich, Barbara J.

    2015-11-03

    The interactions between proteins and surfaces are critical to a number of important processes including biomineralization, the biocompatibility of biomaterials, and the function of biosensors. Although many proteins exist as monomers or small oligomers, amelogenin is a unique protein that self-assembles into supramolecular structures called “nanospheres,” aggregates of 100’s of monomers that are 20-60 nm in diameter. The nanosphere quaternary structure is observed in solution, however, the quaternary structure of amelogenin adsorbed onto hydroxyapatite (HAP) surfaces is not known even though it may be important to amelogenin’s function in forming highly elongated and intricately assembled HAP crystallites during enamel formation. We report studies of the interactions of the enamel protein, amelogenin (rpM179), with a well-defined (100) face prepared by synthesis of large crystals of HAP. High resolution, in-situ atomic force microscopy (AFM) was used to directly observe protein adsorption onto HAP at the molecular level within an aqueous solution environment. Our study shows that the amelogenin nanospheres disassemble onto the HAP surface, breaking down into oligomeric (25-mer) subunits of the larger nanosphere. In some cases, the disassembly event is directly observed by in situ imaging for the first time. Quantification of the adsorbate amounts by size analysis led to the determination of a protein binding energy (17.1 kbT) to a specific face of HAP (100). The kinetics of disassembly are greatly slowed in aged solutions, indicating there are time-dependent increases in oligomer-oligomer binding interactions within the nanosphere. A small change in the sequence of amelogenin by the attachment of a histidine tag to the N-terminus of rpM179 to form rp(H)M180 results in the adsorption of a complete second layer on top of the underlying first layer. Our research elucidates how supramolecular protein structures interact and break down at surfaces and how small

  18. Rho-kinase-dependent actin turnover and actomyosin disassembly are necessary for mouse spinal neural tube closure

    PubMed Central

    Escuin, Sarah; Vernay, Bertrand; Savery, Dawn; Gurniak, Christine B.; Witke, Walter; Greene, Nicholas D. E.; Copp, Andrew J.

    2015-01-01

    ABSTRACT The cytoskeleton is widely considered essential for neurulation, yet the mouse spinal neural tube can close despite genetic and non-genetic disruption of the cytoskeleton. To investigate this apparent contradiction, we applied cytoskeletal inhibitors to mouse embryos in culture. Preventing actomyosin cross-linking, F-actin assembly or myosin II contractile activity did not disrupt spinal closure. In contrast, inhibiting Rho kinase (ROCK, for which there are two isoforms ROCK1 and ROCK2) or blocking F-actin disassembly prevented closure, with apical F-actin accumulation and adherens junction disturbance in the neuroepithelium. Cofilin-1-null embryos yielded a similar phenotype, supporting the hypothesis that there is a key role for actin turnover. Co-exposure to Blebbistatin rescued the neurulation defects caused by RhoA inhibition, whereas an inhibitor of myosin light chain kinase, ML-7, had no such effect. We conclude that regulation of RhoA, Rho kinase, LIM kinase and cofilin signalling is necessary for spinal neural tube closure through precise control of neuroepithelial actin turnover and actomyosin disassembly. In contrast, actomyosin assembly and myosin ATPase activity are not limiting for closure. PMID:26040287

  19. Spiropyran-Decorated SiO₂-Pt Janus Micromotor: Preparation and Light-Induced Dynamic Self-Assembly and Disassembly.

    PubMed

    Zhang, Qilu; Dong, Renfeng; Chang, Xueyi; Ren, Biye; Tong, Zhen

    2015-11-11

    The controlled self-assembly of self-propelled Janus micromotors may give the micromotors some potential applications in many fields. In this work, we design a kind of SiO2-Pt Janus catalytic micromotor functionalized by spiropyran (SP) moieties on the surface of the SiO2 hemisphere. The spiropyran-modified SiO2-Pt Janus micromotor exhibits autonomous self-propulsion in the presence of hydrogen peroxide fuel in N,N-dimethylformamide (DMF)/H2O (1:1 in volume) mixture. We demonstrate that the self-propelled Janus micromotors can dynamically assemble into multiple motors because of the electrostatic attractions and π-π stacking between MC molecules induced by UV light irradiation (λ = 365 nm) and also quickly disassemble into mono motors when the light is switched to green light (λ = 520 nm) for the first time. Furthermore, the assembled Janus motors can move together automatically with different motion patterns propelled by the hydrogen peroxide fuels upon UV irradiation. The work provides a new approach not only to the development of the potential application of Janus motors but also to the fundamental science of reversible self-assembly and disassembly of Janus micromotors. PMID:26488455

  20. Label-free multimodal protease detection based on protein/perylene dye coassembly and enzyme-triggered disassembly.

    PubMed

    Lin, Yiyang; Chapman, Robert; Stevens, Molly M

    2014-07-01

    The development of novel assays for protease sensing plays an important role in clinical diagnostics and therapeutics. Herein, we report a supramolecular platform for label-free protease detection, based on protein/dye self-assembly and enzyme-triggered disassembly. In a typical case, coassembly of protamine sulfate and perylene dye via electrostatic attractions and π-π interactions caused significant colorimetric and fluorescent responses. Subsequent addition of trypsin was found to cleave the amide bonds of protein, triggering the dissociation of protein/dye aggregates and the release of perylene dyes. The enzyme-triggered disassembly was transduced into multiple readouts including absorption, fluorescence, and polarization, which were exploited for trypsin detection and inhibitor testing. This assay was also used for turn-on fluorescence detection of cathepsin B, an enzyme known to be overexpressed in mammalian cancer cells. The integration of supramolecular self-assembly into enzyme detection in this work has provided a novel label-free biosensing platform which is highly sensitive with multimodal readouts. The relative simplicity of the approach avoids the need for time-consuming substrate synthesis, and is also amenable to naked eye detection. PMID:24914622

  1. Disassembly of yeast 80S ribosomes into subunits is a concerted action of ribosome-assisted folding of denatured protein.

    PubMed

    Chakraborty, Biprashekhar; Bhakta, Sayan; Sengupta, Jayati

    2016-01-22

    It has been shown by several groups that ribosome can assist folding of denatured protein in vitro and the process is conserved across the species. Domain V of large ribosomal rRNA which occupies the intersubunit side of the large subunit was identified as the key player responsible for chaperoning the folding process. Thus, it is conceivable that denatured protein needs to access the intersubunit space of the ribosome in order to get folded. In this study, we have investigated the mechanism of release of the protein from the eukaryotic ribosome following reactivation. We have observed significant splitting of yeast 80S ribosome when incubated with the denatured BCAII protein. Energy-free disassembly mechanism functions in low Mg(+2) ion concentration for prokaryotic ribosomes. Eukaryotic ribosomes do not show significant splitting even at low Mg(+2) ion concentration. In this respect, denatured protein-induced disassembly of eukaryotic ribosome without the involvement of any external energy source is intriguing. For prokaryotic ribosomes, it was reported that the denatured protein induces ribosome splitting into subunits in order to access domain V-rRNA. In contrast, our results suggest an alternative mechanism for eukaryotic ribosomal rRNA-mediated protein folding and subsequent separation of the subunits by which release of the activated-protein occurs. PMID:26723252

  2. Overexpression of MLN51 triggers P-body disassembly and formation of a new type of RNA granules.

    PubMed

    Cougot, Nicolas; Daguenet, Elisabeth; Baguet, Aurélie; Cavalier, Annie; Thomas, Daniel; Bellaud, Pascale; Fautrel, Alain; Godey, Florence; Bertrand, Edouard; Tomasetto, Catherine; Gillet, Reynald

    2014-11-01

    Metastatic lymph node 51 (MLN51, also known as CASC3) is a core component of the exon junction complex (EJC), which is loaded onto spliced mRNAs and plays an essential role in determining their fate. Unlike the three other EJC core components [eIF4AIII, Magoh and Y14 (also known as RBM8A)], MLN51 is mainly located in the cytoplasm, where it plays a key role in the assembly of stress granules. In this study, we further investigated the cytoplasmic role of MLN51. We show that MLN51 is a new component of processing bodies (P-bodies). When overexpressed, MLN51 localizes in novel small cytoplasmic foci. These contain RNA, show directed movements and are distinct from stress granules and P-bodies. The appearance of these foci correlates with the process of P-body disassembly. A similar reduction in P-body count is also observed in human HER2-positive (HER2(+)) breast cancer cells overexpressing MLN51. This suggests that P-body disassembly and subsequent mRNA deregulation might correlate with cancer progression. PMID:25205763

  3. Mechanical breaking of microtubules in axons during dynamic stretch injury underlies delayed elasticity, microtubule disassembly, and axon degeneration

    PubMed Central

    Tang-Schomer, Min D.; Patel, Ankur R.; Baas, Peter W.; Smith, Douglas H.

    2010-01-01

    Little is known about which components of the axonal cytoskeleton might break during rapid mechanical deformation, such as occurs in traumatic brain injury. Here, we micropatterned neuronal cell cultures on silicone membranes to induce dynamic stretch exclusively of axon fascicles. After stretch, undulating distortions formed along the axons that gradually relaxed back to a straight orientation, demonstrating a delayed elastic response. Subsequently, swellings developed, leading to degeneration of almost all axons by 24 h. Stabilizing the microtubules with taxol maintained the undulating geometry after injury but greatly reduced axon degeneration. Conversely, destabilizing microtubules with nocodazole prevented undulations but greatly increased the rate of axon loss. Ultrastructural analyses of axons postinjury revealed immediate breakage and buckling of microtubules in axon undulations and progressive loss of microtubules. Collectively, these data suggest that dynamic stretch of axons induces direct mechanical failure at specific points along microtubules. This microtubule disorganization impedes normal relaxation of the axons, resulting in undulations. However, this physical damage also triggers progressive disassembly of the microtubules around the breakage points. While the disintegration of microtubules allows delayed recovery of the “normal” straight axon morphology, it comes at a great cost by interrupting axonal transport, leading to axonal swelling and degeneration.—Tang-Schomer, M. D., Patel, A. R,, Baas, P. W., Smith, D. H. Mechanical breaking of microtubules in axons during dynamic stretch injury underlies delayed elasticity, microtubule disassembly, and axon degeneration. PMID:20019243

  4. Reconstruction of the Disassembly Pathway of an Icosahedral Viral Capsid and Shape Determination of Two Successive Intermediates.

    PubMed

    Law-Hine, Didier; Sahoo, Anil K; Bailleux, Virginie; Zeghal, Mehdi; Prevost, Sylvain; Maiti, Prabal K; Bressanelli, Stéphane; Constantin, Doru; Tresset, Guillaume

    2015-09-01

    Viral capsids derived from an icosahedral plant virus widely used in physical and nanotechnological investigations were fully dissociated into dimers by a rapid change of pH. The process was probed in vitro at high spatiotemporal resolution by time-resolved small-angle X-ray scattering using a high brilliance synchrotron source. A powerful custom-made global fitting algorithm allowed us to reconstruct the most likely pathway parametrized by a set of stoichiometric coefficients and to determine the shape of two successive intermediates by ab initio calculations. None of these two unexpected intermediates was previously identified in self-assembly experiments, which suggests that the disassembly pathway is not a mirror image of the assembly pathway. These findings shed new light on the mechanisms and the reversibility of the assembly/disassembly of natural and synthetic virus-based systems. They also demonstrate that both the structure and dynamics of an increasing number of intermediate species become accessible to experiments. PMID:27120684

  5. Photosensitizer enhanced disassembly of amphiphilic micelle for ROS-response targeted tumor therapy in vivo.

    PubMed

    Dai, Liangliang; Yu, Yonglin; Luo, Zhong; Li, Menghuan; Chen, Weizhen; Shen, Xinkun; Chen, Feng; Sun, Qiang; Zhang, Qingfeng; Gu, Hao; Cai, Kaiyong

    2016-10-01

    This study reports a reactive oxygen species (ROS) sensitive drug delivery system based on amphiphilic polymer of poly(propylene sulfide)-polyethylene glycol-serine-folic acid (PPS-mPEG-Ser-FA). The polymer could form homogeneous micelles with an average diameter of around 80 nm through self-assembly, which would then be loaded with the singlet oxygen-generating photosensitizer of zinc phthalocyanine (ZNPC) and anti-cancer drug of DOX. The disassembly of micelles could be triggered by the hydrophobic to hydrophilic transition of the PPS core in response to ROS-induced oxidation in vitro. ZNPC molecules are capable of producing ROS under laser irradiation, which results in the rapid disassembly of micelles and releasing of the anti-tumor drug for tumor therapy under physiological condition otherwise. Moreover, the excessive ROS production deriving from ZNPC synergically induces cells apoptosis. Furthermore, the DOX loaded amphiphilic micelles could be internalized by tumor cells via FA receptor-mediated endocytosis to effectively inhibit the tumor growth in vivo, while with only minimal toxic side effects. The results in vitro and in vivo consistently demonstrate that the light-responsive micelle is a promising biodegradable nanocarrier for on-command drug release and targeted tumor therapy. PMID:27423095

  6. 29 CFR Appendix B to Subpart Cc of... - Assembly/Disassembly: Sample Procedures for Minimizing the Risk of Unintended Dangerous Boom...

    Code of Federal Regulations, 2011 CFR

    2011-07-01

    ... Risk of Unintended Dangerous Boom Movement B Appendix B to Subpart CC of Part 1926 Labor Regulations...) SAFETY AND HEALTH REGULATIONS FOR CONSTRUCTION Cranes and Derricks in Construction Pt. 1926, Subpt. CC, App. B Appendix B to Subpart CC of Part 1926—Assembly/Disassembly: Sample Procedures for...

  7. 29 CFR Appendix B to Subpart Cc of... - Assembly/Disassembly: Sample Procedures for Minimizing the Risk of Unintended Dangerous Boom...

    Code of Federal Regulations, 2014 CFR

    2014-07-01

    ... Risk of Unintended Dangerous Boom Movement B Appendix B to Subpart CC of Part 1926 Labor Regulations...) SAFETY AND HEALTH REGULATIONS FOR CONSTRUCTION Cranes and Derricks in Construction Pt. 1926, Subpt. CC, App. B Appendix B to Subpart CC of Part 1926—Assembly/Disassembly: Sample Procedures for...

  8. The RanBP2/RanGAP1*SUMO1/Ubc9 SUMO E3 ligase is a disassembly machine for Crm1-dependent nuclear export complexes

    PubMed Central

    Ritterhoff, Tobias; Das, Hrishikesh; Hofhaus, Götz; Schröder, Rasmus R.; Flotho, Annette; Melchior, Frauke

    2016-01-01

    Continuous cycles of nucleocytoplasmic transport require disassembly of transport receptor/Ran-GTP complexes in the cytoplasm. A basic disassembly mechanism in all eukaryotes depends on soluble RanGAP and RanBP1. In vertebrates, a significant fraction of RanGAP1 stably interacts with the nucleoporin RanBP2 at a binding site that is flanked by FG-repeats and Ran-binding domains, and overlaps with RanBP2's SUMO E3 ligase region. Here, we show that the RanBP2/RanGAP1*SUMO1/Ubc9 complex functions as an autonomous disassembly machine with a preference for the export receptor Crm1. We describe three in vitro reconstituted disassembly intermediates, which show binding of a Crm1 export complex via two FG-repeat patches, cargo-release by RanBP2's Ran-binding domains and retention of free Crm1 at RanBP2 after Ran-GTP hydrolysis. Intriguingly, all intermediates are compatible with SUMO E3 ligase activity, suggesting that the RanBP2/RanGAP1*SUMO1/Ubc9 complex may link Crm1- and SUMO-dependent functions. PMID:27160050

  9. Regulation of dynamin-2 assembly-disassembly and function through the SH3A domain of intersectin-1s.

    PubMed

    Knezevic, Ivana; Predescu, Dan; Bardita, Cristina; Wang, Minhua; Sharma, Tiffany; Keith, Barbara; Neamu, Radu; Malik, Asrar B; Predescu, Sanda

    2011-11-01

    Intersectin-1s (ITSN-1s), a five Src homology 3 (SH3) domain-containing protein, is critically required for caveolae and clathrin-mediated endocytosis (CME), due to its interactions with dynamin (dyn). Of the five SH3A-E domains, SH3A is unique because of its high affinity for dyn and potent inhibition of CME. However, the molecular mechanism by which SH3A integrates in the overall function of ITSN-1s to regulate the endocytic process is not understood. Using biochemical and functional approaches as well as high-resolution electron microscopy, we show that SH3A exogenously expressed in human lung endothelial cells caused abnormal endocytic structures, distorted caveolae clusters, frequent staining-dense rings around the caveolar necks and 60% inhibition of caveolae internalization. In vitro studies further revealed that SH3A, similar to full-length ITSN-1s stimulates dyn2 oligomerization and guanosine triphosphatase (GTP)ase activity, effects not detected when other SH3 domains of ITSN-1s were used as controls. Strikingly, in the presence of SH3A, dyn2-dyn2 interactions are stabilized and despite continuous GTP hydrolysis, dyn2 oligomers cannot disassemble. SH3A may hold up caveolae release from the plasma membrane and formation of free-transport vesicles, by prolonging the lifetime of assembled dyn2. Altogether, our results indicate that ITSN-1s, via its SH3A has the unique ability to regulate dyn2 assembly-disassembly and function during endocytosis. PMID:21129155

  10. Regulation of dynamin-2 assembly–disassembly and function through the SH3A domain of intersectin-1s

    PubMed Central

    Knezevic, Ivana; Predescu, Dan; Bardita, Cristina; Wang, Minhua; Sharma, Tiffany; Keith, Barbara; Neamu, Radu; Malik, Asrar B; Predescu, Sanda

    2011-01-01

    Abstract Intersectin-1s (ITSN-1s), a five Src homology 3 (SH3) domain-containing protein, is critically required for caveolae and clathrin-mediated endocytosis (CME), due to its interactions with dynamin (dyn). Of the five SH3A-E domains, SH3A is unique because of its high affinity for dyn and potent inhibition of CME. However, the molecular mechanism by which SH3A integrates in the overall function of ITSN-1s to regulate the endocytic process is not understood. Using biochemical and functional approaches as well as high-resolution electron microscopy, we show that SH3A exogenously expressed in human lung endothelial cells caused abnormal endocytic structures, distorted caveolae clusters, frequent staining-dense rings around the caveolar necks and 60% inhibition of caveolae internalization. In vitro studies further revealed that SH3A, similar to full-length ITSN-1s stimulates dyn2 oligomerization and guanosine triphosphatase (GTP)ase activity, effects not detected when other SH3 domains of ITSN-1s were used as controls. Strikingly, in the presence of SH3A, dyn2–dyn2 interactions are stabilized and despite continuous GTP hydrolysis, dyn2 oligomers cannot disassemble. SH3A may hold up caveolae release from the plasma membrane and formation of free-transport vesicles, by prolonging the lifetime of assembled dyn2. Altogether, our results indicate that ITSN-1s, via its SH3A has the unique ability to regulate dyn2 assembly–disassembly and function during endocytosis. PMID:21129155

  11. Dynamics of Nucleic Acid/Cationic Polymer Complexation and Disassembly under Biologically Simulated Conditions Using In Situ Atomic Force Microscopy

    PubMed Central

    Shim, Min Suk; Wang, Xi; Ragan, Regina; Kwon, Young Jik

    2010-01-01

    Elucidating dynamic morphological changes of gene-carrying vectors and their nucleic acid release under varying intracellular conditions has been a technical challenge. Atomic force microscopy (AFM) was employed to observe nucleic acid/polymer polyplexes under endosomal and reducible cytosolic conditions. Both ketalized (acid-degradable) and unmodified (non-degradable) polyethylenimine (PEI) in linear and branched forms were used to prepare plasmid DNA- or siRNA-complexing polyplexes. Then, the polyplexes’ complexation and disassembly were observed by in situ AFM in various differentially changing buffers that represent intracellular conditions. Results demonstrated obvious morphological destruction of DNA/ketalized linear PEI (KL-PEI) polyplexes under mildly acidic endosomal conditions, while no morphological changes were observed by DNA/ketalized branched PEI (KB-PEI) under the same conditions. In addition, siRNA was more efficiently dissociated from KL-PEI than KB-PEI under the same conditions. Non-degradable PEI did not show any evidence that DNA or siRNA was released. Anionic biomacromolecules (e.g., heparan sulfate), which was hypothesized to dissociate nucleic acids from cationic polymers, did not successfully disassemble polyplexes but appeared to be adsorbed on cationic polymers. The in situ AFM results combined with in vitro cellular transfection and gene silencing indicated that efficient endosomal escape of plasmid DNA in a compact polyplex form is required for efficient gene expression. On the contrary, rapid dissociation of siRNA from its cationic carrier is crucial for efficient gene silencing. The findings of this study may provide new insightful information for designing stimuli-responsive nonviral gene vectors as well as expanding tools for investigating nonviral vectors in nano scales under biologically inspired conditions. PMID:20803694

  12. P130Cas Src-Binding and Substrate Domains Have Distinct Roles in Sustaining Focal Adhesion Disassembly and Promoting Cell Migration

    PubMed Central

    Meenderink, Leslie M.; Ryzhova, Larisa M.; Donato, Dominique M.; Gochberg, Daniel F.; Kaverina, Irina; Hanks, Steven K.

    2010-01-01

    The docking protein p130Cas is a prominent Src substrate found in focal adhesions (FAs) and is implicated in regulating critical aspects of cell motility including FA disassembly and protrusion of the leading edge plasma membrane. To better understand how p130Cas acts to promote these events we examined requirements for established p130Cas signaling motifs including the SH3-binding site of the Src binding domain (SBD) and the tyrosine phosphorylation sites within the substrate domain (SD). Expression of wild type p130Cas in Cas −/− mouse embryo fibroblasts resulted in enhanced cell migration associated with increased leading-edge actin flux, increased rates of FA assembly/disassembly, and uninterrupted FA turnover. Variants lacking either the SD phosphorylation sites or the SBD SH3-binding motif were able to partially restore the migration response, while only a variant lacking both signaling functions was fully defective. Notably, the migration defects associated with p130Cas signaling-deficient variants correlated with longer FA lifetimes resulting from aborted FA disassembly attempts. However the SD mutational variant was fully defective in increasing actin assembly at the protruding leading edge and FA assembly/disassembly rates, indicating that SD phosphorylation is the sole p130Cas signaling function in regulating these processes. Our results provide the first quantitative evidence supporting roles for p130Cas SD tyrosine phosphorylation in promoting both leading edge actin flux and FA turnover during cell migration, while further revealing that the p130Cas SBD has a function in cell migration and sustained FA disassembly that is distinct from its known role of promoting SD tyrosine phosphorylation. PMID:20976150

  13. Reserves in western basins

    SciTech Connect

    Caldwell, R.H.; Cotton, B.W.

    1992-06-01

    This project requires generation of producible tight gas sand reserve estimates for three western basins. The requirement is to perform such reserve estimates using industry accepted practices so that results will have high credibility and acceptance by the oil and gas industry. The ultimate goal of the project is to encourage development of the tight gas formation by industry through reduction of the technical and economic risks of locating, drilling and completing commercial gas wells. The three geological basins selected for study are the Greater Green River Basin, Uinta Basin and Piceance Basin, located in the Colorado, Utah and Wyoming Rocky Mountain region.

  14. Reserves in western basins

    SciTech Connect

    Caldwell, R.H.; Cotton, B.W.

    1992-01-01

    This project requires generation of producible tight gas sand reserve estimates for three western basins. The requirement is to perform such reserve estimates using industry accepted practices so that results will have high credibility and acceptance by the oil and gas industry. The ultimate goal of the project is to encourage development of the tight gas formation by industry through reduction of the technical and economic risks of locating, drilling and completing commercial gas wells. The three geological basins selected for study are the Greater Green River Basin, Uinta Basin and Piceance Basin, located in the Colorado, Utah and Wyoming Rocky Mountain region.

  15. Closure Report for Corrective Action Unit 117: Area 26 Pluto Disassembly Facility, Nevada Test Site, Nevada, Revision 0

    SciTech Connect

    Mark Burmeister

    2009-06-01

    This Closure Report (CR) presents information supporting the closure of Corrective Action Unit (CAU) 117: Area 26 Pluto Disassembly Facility, Nevada Test Site, Nevada. This CR complies with the requirements of the Federal Facility Agreement and Consent Order that was agreed to by the State of Nevada; U.S. Department of Energy (DOE), Environmental Management; U.S. Department of Defense; and DOE, Legacy Management. Corrective Action Unit 117 comprises Corrective Action Site (CAS) 26-41-01, Pluto Disassembly Facility, located in Area 26 of the Nevada Test Site. The purpose of this CR is to provide documentation supporting the completed corrective actions and provide data confirming that the closure objectives for CAU 117 were met. To achieve this, the following actions were performed: • Review the current site conditions, including the concentration and extent of contamination. • Implement any corrective actions necessary to protect human health and the environment. • Properly dispose of corrective action and investigation wastes. • Document Notice of Completion and closure of CAU 117 issued by the Nevada Division of Environmental Protection. From May 2008 through February 2009, closure activities were performed as set forth in the Streamlined Approach for Environmental Restoration Plan for Corrective Action Unit 117, Area 26 Pluto Disassembly Facility, Nevada Test Site, Nevada. The purpose of the activities as defined during the data quality objectives process were: • Determine whether contaminants of concern (COCs) are present. • If COCs are present, determine their nature and extent, implement appropriate corrective actions, and properly dispose of wastes. Analytes detected during the closure activities were evaluated against final action levels to determine COCs for CAU 117. Assessment of the data generated from closure activities indicated that the final action levels were exceeded for polychlorinated biphenyls (PCBs) reported as total Aroclor and

  16. Proteolytic disassembly of peptide-mediated graphene oxide assemblies for turn-on fluorescence sensing of proteases

    NASA Astrophysics Data System (ADS)

    Yang, Jin-Kyoung; Kwak, Seon-Yeong; Jeon, Su-Ji; Lee, Eunjin; Ju, Jong-Min; Kim, Hye-In; Lee, Yoon-Sik; Kim, Jong-Ho

    2016-06-01

    Molecule-induced assembly of nanomaterials can alter their unique chemical and physical properties, which can be a promising approach for sensing. Herein, we demonstrate an optical `turn-on' biosensor for the detection of matrix metalloproteinase-2 (MMP-2), fabricated by means of a peptide-induced assembly of fluorescent graphene oxide (GO). Functionalization of GO with a peptide substrate for MMP-2 bearing a thiol group leads to its self-assembly via disulfide bonding, accompanied by self-quenching of GO's strong fluorescence. This peptide-induced GO assembly is then disassembled by proteolytic cleavage in the presence of MMP-2, thereby restoring the level of self-quenched GO fluorescence. With this approach, we are able to detect MMP-2 and to investigate the kinetic parameters of MMP-2 activity. The GO-peptide assembly is successfully applied to the selective and sensitive detection of MMP-2 secreted by living cells, human hepatocytes HepG2, at a concentration of 2 ng mL-1.Molecule-induced assembly of nanomaterials can alter their unique chemical and physical properties, which can be a promising approach for sensing. Herein, we demonstrate an optical `turn-on' biosensor for the detection of matrix metalloproteinase-2 (MMP-2), fabricated by means of a peptide-induced assembly of fluorescent graphene oxide (GO). Functionalization of GO with a peptide substrate for MMP-2 bearing a thiol group leads to its self-assembly via disulfide bonding, accompanied by self-quenching of GO's strong fluorescence. This peptide-induced GO assembly is then disassembled by proteolytic cleavage in the presence of MMP-2, thereby restoring the level of self-quenched GO fluorescence. With this approach, we are able to detect MMP-2 and to investigate the kinetic parameters of MMP-2 activity. The GO-peptide assembly is successfully applied to the selective and sensitive detection of MMP-2 secreted by living cells, human hepatocytes HepG2, at a concentration of 2 ng mL-1. Electronic

  17. Stimulation of NSF ATPase activity by alpha-SNAP is required for SNARE complex disassembly and exocytosis.

    PubMed

    Barnard, R J; Morgan, A; Burgoyne, R D

    1997-11-17

    N-ethylmaleimide-sensitive fusion protein (NSF) and alpha-SNAP play key roles in vesicular traffic through the secretory pathway. In this study, NH2- and COOH-terminal truncation mutants of alpha-SNAP were assayed for ability to bind NSF and stimulate its ATPase activity. Deletion of up to 160 NH2-terminal amino acids had little effect on the ability of alpha-SNAP to stimulate the ATPase activity of NSF. However, deletion of as few as 10 COOH-terminal amino acids resulted in a marked decrease. Both NH2-terminal (1-160) and COOH-terminal (160-295) fragments of alpha-SNAP were able to bind to NSF, suggesting that alpha-SNAP contains distinct NH2- and COOH-terminal binding sites for NSF. Sequence alignment of known SNAPs revealed only leucine 294 to be conserved in the final 10 amino acids of alpha-SNAP. Mutation of leucine 294 to alanine (alpha-SNAP(L294A)) resulted in a decrease in the ability to stimulate NSF ATPase activity but had no effect on the ability of this mutant to bind NSF. alpha-SNAP (1-285) and alpha-SNAP (L294A) were unable to stimulate Ca2+-dependent exocytosis in permeabilized chromaffin cells. In addition, alpha-SNAP (1-285), and alpha-SNAP (L294A) were able to inhibit the stimulation of exocytosis by exogenous alpha-SNAP. alpha-SNAP, alpha-SNAP (1-285), and alpha-SNAP (L294A) were all able to become incorporated into a 20S complex and recruit NSF. In the presence of MgATP, alpha-SNAP (1-285) and alpha-SNAP (L294A) were unable to fully disassemble the 20S complex and did not allow vesicle-associated membrane protein dissociation to any greater level than seen in control incubations. These findings imply that alpha-SNAP stimulation of NSF ATPase activity may be required for 20S complex disassembly and for the alpha-SNAP stimulation of exocytosis. PMID:9362506

  18. The pedagogical value of Disassemble/Analyze/Assemble (DAA) activities: Assessing the potential for motivation and transfer

    NASA Astrophysics Data System (ADS)

    Dalrymple, Odesma Onika

    Undergraduate engineering institutions are currently seeking to improve recruiting practices and to retain engineering majors particularly by addressing what many studies document as a major challenge of poor instruction. There is an undisputed need for instructional practices that motivate students in addition to facilitating the transfer of learning beyond the classroom. Reverse engineering and product dissection, more broadly termed Disassemble/Analyze/Assemble (DAA) activities, have shown potential to address these concerns, based on the reviews of students and professors alike. DAA activities involve the systematic deconstruction of an artifact, the subsequent analysis and possible reconstruction of its components for the purpose of understanding the embodied fundamental concepts, design principles and developmental processes. These activities have been part of regular industry practice for some time; however, the systematic analysis of their benefits for learning and instruction is a relatively recent phenomenon. A number of studies have provided highly descriptive accounts of curricula and possible outcomes of DAA activities; but, relatively few have compared participants doing DAA activities to a control group doing more traditional activities. In this respect, two quasi-experiments were conducted as part of a first-year engineering laboratory, and it was hypothesized that students who engaged in the DAA activity would be more motivated and would demonstrate higher frequencies of transfer than the control. A DAA activity that required students to disassemble a single-use camera and analyze its components to discover how it works was compared to a step-by-step laboratory activity in the first experiment and a lecture method of instruction in the second experiment. In both experiments, over forty percent of the students that engaged in the DAA activity demonstrated the ability to transfer the knowledge gained about the functions of the camera's components and

  19. Divergent/passive margin basins

    SciTech Connect

    Edwards, J.D. ); Santogrossi, P.A. )

    1989-01-01

    This book discusses the detailed geology of the four divergent margin basins and establishes a set of analog scenarios which can be used for future petroleum exploration. The divergent margin basins are the Campos basin of Brazil, the Gabon basin, the Niger delta, and the basins of the northwest shelf of Australia. These four petroleum basins present a wide range of stratigraphic sequences and structural styles that represent the diverse evolution of this large and important class of world petroleum basins.

  20. Prostaglandin E2-EP1 and EP2 receptor signaling promotes apical junctional complex disassembly of Caco-2 human colorectal cancer cells

    PubMed Central

    Tanaka, Marcelo N; Diaz, Bruno L; de Souza, Wanderley; Morgado-Diaz, Jose A

    2008-01-01

    Background The apical junctional complex (AJC) is a dynamic structure responsible to maintain epithelial cell-cell adhesions and it plays important functions such as, polarity, mechanical integrity, and cell signaling. Alteration of this complex during pathological events leads to an impaired epithelial barrier by perturbation of the cell-cell adhesion system. Although clinical and experimental data indicate that prostaglandin E2 (PGE2) plays a critical function in promoting cell motility and cancer progression, little is known concerning its role in AJC disassembly, an event that takes place at the beginning of colorectal tumorigenesis. Using Caco-2 cells, a cell line derived from human colorectal cancer, we investigated the effects of prostaglandin E2 (PGE2) treatment on AJC assembly and function. Results Exposition of Caco-2 cells to PGE2 promoted differential alteration of AJC protein distribution, as evidenced by immunofluorescence and immunoblotting analysis and impairs the barrier function, as seen by a decrease in the transepithelial electric resistance and an increase in the permeability to ruthenium red marker. We demonstrated the involvement of EP1 and EP2 prostaglandin E2 receptor subtypes in the modulation of the AJC disassembly caused by prostanoid. Furthermore, pharmacological inhibition of protein kinase-C, but not PKA and p38MAPK significantly prevented the PGE2 effects on the AJC disassembly. Conclusion Our findings strongly suggest a central role of Prostaglandin E2-EP1 and EP2 receptor signaling to mediate AJC disassembly through a mechanism that involves PKC and claudin-1 as important target for the TJ-related effects in human colorectal cancer cells (Caco-2). PMID:19055708

  1. Nucleolar disruption and cajal body disassembly are nuclear hallmarks of DNA damage-induced neurodegeneration in purkinje cells.

    PubMed

    Baltanás, Fernando C; Casafont, Iñigo; Weruaga, Eduardo; Alonso, José R; Berciano, María T; Lafarga, Miguel

    2011-07-01

    The Purkinje cell (PC) degeneration (pcd) phenotype results from mutation in nna1 gene and is associated with the degeneration and death of PCs during the postnatal life. Although the pcd mutation is a model of the ataxic mouse, it shares clinical and pathological characteristics of inherited human spinocerebellar ataxias. PC degeneration in pcd mice provides a useful neuronal system to study nuclear mechanisms involved in DNA damage-dependent neurodegeneration, particularly the contribution of nucleoli and Cajal bodies (CBs). Both nuclear structures are engaged in housekeeping functions for neuronal survival, the biogenesis of ribosomes and the maturation of snRNPs and snoRNPs required for pre-mRNA and pre-rRNA processing, respectively. In this study, we use ultrastructural analysis, in situ transcription assay and molecular markers for DNA damage, nucleoli and CB components to demonstrate that PC degeneration involves the progressive accumulation of nuclear DNA damage associated with disruption of nucleoli and CBs, disassembly of polyribosomes into monoribosomes, ribophagy and shut down of nucleolar and extranucleolar transcription. Microarray analysis reveals that four genes encoding repressors of nucleolar rRNA synthesis (p53, Rb, PTEN and SNF2) are upregulated in the cerebellum of pcd mice. Collectively, these data support that nucleolar and CB alterations are hallmarks of DNA damage-induced neurodegeneration. PMID:21054627

  2. Host Cofactors and Pharmacologic Ligands Share an Essential Interface in HIV-1 Capsid That Is Lost upon Disassembly

    PubMed Central

    McEwan, William A.; Fletcher, Adam J.; Essig, Sebastian; Chin, Jason W.; Halambage, Upul D.; Aiken, Christopher; James, Leo C.

    2014-01-01

    The HIV-1 capsid is involved in all infectious steps from reverse transcription to integration site selection, and is the target of multiple host cell and pharmacologic ligands. However, structural studies have been limited to capsid monomers (CA), and the mechanistic basis for how these ligands influence infection is not well understood. Here we show that a multi-subunit interface formed exclusively within CA hexamers mediates binding to linear epitopes within cellular cofactors NUP153 and CPSF6, and is competed for by the antiretroviral compounds PF74 and BI-2. Each ligand is anchored via a shared phenylalanine-glycine (FG) motif to a pocket within the N-terminal domain of one monomer, and all but BI-2 also make essential interactions across the N-terminal domain: C-terminal domain (NTD:CTD) interface to a second monomer. Dissociation of hexamer into CA monomers prevents high affinity interaction with CPSF6 and PF74, and abolishes binding to NUP153. The second interface is conformationally dynamic, but binding of NUP153 or CPSF6 peptides is accommodated by only one conformation. NUP153 and CPSF6 have overlapping binding sites, but each makes unique CA interactions that, when mutated selectively, perturb cofactor dependency. These results reveal that multiple ligands share an overlapping interface in HIV-1 capsid that is lost upon viral disassembly. PMID:25356722

  3. Role of phosphorylation of Cdc20 in p31comet-stimulated disassembly of the mitotic checkpoint complex

    PubMed Central

    Miniowitz-Shemtov, Shirly; Eytan, Esther; Ganoth, Dvora; Sitry-Shevah, Danielle; Dumin, Elena; Hershko, Avram

    2012-01-01

    The mitotic checkpoint system delays anaphase until all chromosomes are correctly attached to the mitotic spindle. When the checkpoint is turned on, it promotes the formation of the mitotic checkpoint complex (MCC), which inhibits the ubiquitin ligase anaphase-promoting complex/cyclosome (APC/C). MCC is composed of the checkpoint proteins BubR1, Bub3, and Mad2 bound to the APC/C activator Cdc20. When the checkpoint is satisfied, MCC is disassembled and APC/C becomes active. Previous studies have shown that the Mad2-binding protein p31comet promotes the dissociation of Cdc20 from BubR1 in MCC in a process that requires ATP. We now show that a part of MCC dissociation is blocked by inhibitors of cyclin-dependent kinases (Cdks) and that purified Cdk1–cyclin B stimulates this process. The mutation of all eight potential Cdk phosphorylation sites of Cdc20 partially prevented its release from BubR1. Furthermore, p31comet stimulated Cdk-catalyzed phosphorylation of Cdc20 in MCC. It is suggested that the binding of p31comet to Mad2 in MCC may trigger a conformational change in Cdc20 that facilitates its phosphorylation by Cdk, and that the latter process may promote its dissociation from BubR1. PMID:22566641

  4. Proteolytic disassembly of peptide-mediated graphene oxide assemblies for turn-on fluorescence sensing of proteases.

    PubMed

    Yang, Jin-Kyoung; Kwak, Seon-Yeong; Jeon, Su-Ji; Lee, Eunjin; Ju, Jong-Min; Kim, Hye-In; Lee, Yoon-Sik; Kim, Jong-Ho

    2016-06-16

    Molecule-induced assembly of nanomaterials can alter their unique chemical and physical properties, which can be a promising approach for sensing. Herein, we demonstrate an optical 'turn-on' biosensor for the detection of matrix metalloproteinase-2 (MMP-2), fabricated by means of a peptide-induced assembly of fluorescent graphene oxide (GO). Functionalization of GO with a peptide substrate for MMP-2 bearing a thiol group leads to its self-assembly via disulfide bonding, accompanied by self-quenching of GO's strong fluorescence. This peptide-induced GO assembly is then disassembled by proteolytic cleavage in the presence of MMP-2, thereby restoring the level of self-quenched GO fluorescence. With this approach, we are able to detect MMP-2 and to investigate the kinetic parameters of MMP-2 activity. The GO-peptide assembly is successfully applied to the selective and sensitive detection of MMP-2 secreted by living cells, human hepatocytes HepG2, at a concentration of 2 ng mL(-1). PMID:27271225

  5. AIP1-mediated actin disassembly is required for postnatal germ cell migration and spermatogonial stem cell niche establishment

    PubMed Central

    Xu, J; Wan, P; Wang, M; Zhang, J; Gao, X; Hu, B; Han, J; Chen, L; Sun, K; Wu, J; Wu, X; Huang, X; Chen, J

    2015-01-01

    In mammals, spermatogonial stem cells (SSCs) arise from early germ cells called gonocytes, which are derived from primordial germ cells during embryogenesis and remain quiescent until birth. After birth, these germ cells migrate from the center of testicular cord, through Sertoli cells, and toward the basement membrane to form the SSC pool and establish the SSC niche architecture. However, molecular mechanisms underlying germ cell migration and niche establishment are largely unknown. Here, we show that the actin disassembly factor actin interacting protein 1 (AIP1) is required in both germ cells and Sertoli cells to regulate this process. Germ cell-specific or Sertoli cell-specific deletion of Aip1 gene each led to significant defects in germ cell migration after postnatal day 4 or 5, accompanied by elevated levels of actin filaments (F-actin) in the affected cells. Furthermore, our data demonstrated that interaction between germ cells and Sertoli cells, likely through E-cadherin-mediated cell adhesion, is critical for germ cells' migration toward the basement membrane. At last, Aip1 deletion in Sertoli cells decreased SSC self-renewal, increased spermatogonial differentiation, but did not affect the expression and secretion levels of growth factors, suggesting that the disruption of SSC function results from architectural changes in the postnatal niche. PMID:26181199

  6. Nucleosome disassembly during human non-homologous end joining followed by concerted HIRA- and CAF-1-dependent reassembly

    PubMed Central

    Li, Xuan; Tyler, Jessica K

    2016-01-01

    The cell achieves DNA double-strand break (DSB) repair in the context of chromatin structure. However, the mechanisms used to expose DSBs to the repair machinery and to restore the chromatin organization after repair remain elusive. Here we show that induction of a DSB in human cells causes local nucleosome disassembly, apparently independently from DNA end resection. This efficient removal of histone H3 from the genome during non-homologous end joining was promoted by both ATM and the ATP-dependent nucleosome remodeler INO80. Chromatin reassembly during DSB repair was dependent on the HIRA histone chaperone that is specific to the replication-independent histone variant H3.3 and on CAF-1 that is specific to the replication-dependent canonical histones H3.1/H3.2. Our data suggest that the epigenetic information is re-established after DSB repair by the concerted and interdependent action of replication-independent and replication-dependent chromatin assembly pathways. DOI: http://dx.doi.org/10.7554/eLife.15129.001 PMID:27269284

  7. FAK–MAPK-dependent adhesion disassembly downstream of L1 contributes to semaphorin3A-induced collapse

    PubMed Central

    Bechara, Ahmad; Nawabi, Homaira; Moret, Frédéric; Yaron, Avraham; Weaver, Eli; Bozon, Muriel; Abouzid, Karima; Guan, Jun-Lin; Tessier-Lavigne, Marc; Lemmon, Vance; Castellani, Valérie

    2008-01-01

    Axonal receptors for class 3 semaphorins (Sema3s) are heterocomplexes of neuropilins (Nrps) and Plexin-As signalling coreceptors. In the developing cerebral cortex, the Ig superfamily cell adhesion molecule L1 associates with Nrp1. Intriguingly, the genetic removal of L1 blocks axon responses of cortical neurons to Sema3A in vitro despite the expression of Plexin-As in the cortex, suggesting either that L1 substitutes for Plexin-As or that L1 and Plexin-A are both required and mediate distinct roles. We report that association of Nrp1 with L1 but not Plexin-As mediates the recruitment and activation of a Sema3A-induced focal adhesion kinase–mitogen-activated protein kinase cascade. This signalling downstream of L1 is needed for the disassembly of adherent points formed in growth cones and subsequently their collapse response to Sema3A. Plexin-As and L1 are coexpressed and present in common complexes in cortical neurons and both dominant-negative forms of Plexin-A and L1 impair their response to Sema3A. Consistently, Nrp1-expressing cortical projections are defective in mice lacking Plexin-A3, Plexin-A4 or L1. This reveals that specific signalling activities downstream of L1 and Plexin-As cooperate for mediating the axon guidance effects of Sema3A. PMID:18464795

  8. FAK-MAPK-dependent adhesion disassembly downstream of L1 contributes to semaphorin3A-induced collapse.

    PubMed

    Bechara, Ahmad; Nawabi, Homaira; Moret, Frédéric; Yaron, Avraham; Weaver, Eli; Bozon, Muriel; Abouzid, Karima; Guan, Jun-Lin; Tessier-Lavigne, Marc; Lemmon, Vance; Castellani, Valérie

    2008-06-01

    Axonal receptors for class 3 semaphorins (Sema3s) are heterocomplexes of neuropilins (Nrps) and Plexin-As signalling coreceptors. In the developing cerebral cortex, the Ig superfamily cell adhesion molecule L1 associates with Nrp1. Intriguingly, the genetic removal of L1 blocks axon responses of cortical neurons to Sema3A in vitro despite the expression of Plexin-As in the cortex, suggesting either that L1 substitutes for Plexin-As or that L1 and Plexin-A are both required and mediate distinct roles. We report that association of Nrp1 with L1 but not Plexin-As mediates the recruitment and activation of a Sema3A-induced focal adhesion kinase-mitogen-activated protein kinase cascade. This signalling downstream of L1 is needed for the disassembly of adherent points formed in growth cones and subsequently their collapse response to Sema3A. Plexin-As and L1 are coexpressed and present in common complexes in cortical neurons and both dominant-negative forms of Plexin-A and L1 impair their response to Sema3A. Consistently, Nrp1-expressing cortical projections are defective in mice lacking Plexin-A3, Plexin-A4 or L1. This reveals that specific signalling activities downstream of L1 and Plexin-As cooperate for mediating the axon guidance effects of Sema3A. PMID:18464795

  9. A switchable self-assembling and disassembling chiral system based on a porphyrin-substituted phenylalanine-phenylalanine motif.

    PubMed

    Charalambidis, Georgios; Georgilis, Evangelos; Panda, Manas K; Anson, Christopher E; Powell, Annie K; Doyle, Stephen; Moss, David; Jochum, Tobias; Horton, Peter N; Coles, Simon J; Linares, Mathieu; Beljonne, David; Naubron, Jean-Valère; Conradt, Jonas; Kalt, Heinz; Mitraki, Anna; Coutsolelos, Athanassios G; Balaban, Teodor Silviu

    2016-01-01

    Artificial light-harvesting systems have until now not been able to self-assemble into structures with a large photon capture cross-section that upon a stimulus reversibly can switch into an inactive state. Here we describe a simple and robust FLFL-dipeptide construct to which a meso-tetraphenylporphyrin has been appended and which self-assembles to fibrils, platelets or nanospheres depending on the solvent composition. The fibrils, functioning as quenched antennas, give intense excitonic couplets in the electronic circular dichroism spectra which are mirror imaged if the unnatural FDFD-analogue is used. By slightly increasing the solvent polarity, these light-harvesting fibres disassemble to spherical structures with silent electronic circular dichroism spectra but which fluoresce. Upon further dilution with the nonpolar solvent, the intense Cotton effects are recovered, thus proving a reversible switching. A single crystal X-ray structure shows a head-to-head arrangement of porphyrins that explains both their excitonic coupling and quenched fluorescence. PMID:27582363

  10. Full and partial genome-wide assembly and disassembly of the yeast transcription machinery in response to heat shock

    PubMed Central

    Zanton, Sara J.; Pugh, B. Franklin

    2006-01-01

    Eukaryotic genes are controlled by sequence-specific DNA-binding proteins, chromatin regulators, general transcription factors, and elongation factors. Here we examine the genome-wide location of representative members of these groups and their redistribution when the Saccharomyces cerevisiae genome is reprogrammed by heat shock. As expected, assembly of active transcription complexes is coupled to eviction of H2A.Z nucleosomes, and disassembly is coupled to the return of nucleosomes. Remarkably, a large number of promoters assemble into partial preinitiation complexes (partial PICs), containing TFIIA, TFIID (and/or SAGA), TFIIB, TFIIE, and TFIIF. However, RNA polymerase II and TFIIH are generally not recruited, and nucleosomes are not displaced. These promoters may be preparing for additional stress that naturally accompany heat stress. For example, we find that oxidative stress, which often occurs with prolonged exposure of cells to high temperature, converts partial PICs into full PICs. Partial PICs therefore represent novel regulated intermediates that assemble at promoters in the midst of chromatin. PMID:16912275

  11. Depression, constraint, and the liver: (Dis)assembling the treatment of emotion-related disorders in Chinese medicine.

    PubMed

    Scheid, Volker

    2013-03-01

    Traditional Chinese medicine (TCM) is today practiced worldwide, rivaling biomedicine in terms of its globalization. One of the most common TCM diagnoses is "Liver qi constraint," which, in turn, is commonly treated by an herbal formula dating back to the 10th century. In everyday TCM practice, biomedical disease categories such as depression or anxiety and popular disease categories such as stress are often conflated with the Chinese medical notion of constraint. Medical anthropologists, meanwhile, argue that constraint reveals to us a distinctive aesthetics of constructing body/persons in Chinese culture, while psychologists seek to define constraint as a distinctive psychiatric disorder distinctive from depression and anxiety. All of these actors agree in defining constraint as a concept dating back two thousand years to the very origins of Chinese medicine. This article disassembles the articulations by means of which these different facts about constraint are constructed. It shows how ideas about constraint as a disorder caused by the penetration of external pathogens into the body were gradually transformed from the eleventh century onward into constraint as an emotion-related disorder, while treatment strategies were adjusted to match perceptions about body/self that developed among the gentry elite of southeast China in late imperial China. PMID:23315392

  12. Biomedical Exploitation of Chitin and Chitosan via Mechano-Chemical Disassembly, Electrospinning, Dissolution in Imidazolium Ionic Liquids, and Supercritical Drying

    PubMed Central

    Muzzarelli, Riccardo A. A.

    2011-01-01

    Recently developed technology permits to optimize simultaneously surface area, porosity, density, rigidity and surface morphology of chitin-derived materials of biomedical interest. Safe and ecofriendly disassembly of chitin has superseded the dangerous acid hydrolysis and provides higher yields and scaling-up possibilities: the chitosan nanofibrils are finding applications in reinforced bone scaffolds and composite dressings for dermal wounds. Electrospun chitosan nanofibers, in the form of biocompatible thin mats and non-wovens, are being actively studied: composites of gelatin + chitosan + polyurethane have been proposed for cardiac valves and for nerve conduits; fibers are also manufactured from electrospun particles that self-assemble during subsequent freeze-drying. Ionic liquids (salts of alkylated imidazolium) are suitable as non-aqueous solvents that permit desirable reactions to occur for drug delivery purposes. Gel drying with supercritical CO2 leads to structures most similar to the extracellular matrix, even when the chitosan is crosslinked, or in combination with metal oxides of interest in orthopedics. PMID:22131955

  13. Origin of cratonic basins

    NASA Astrophysics Data System (ADS)

    Dev. Klein, George; Hsui, Albert T.

    1987-12-01

    Tectonic subsidence curves show that the Illinois, Michigan, and Williston basins formed by initial fault-controlled mechanical subsidence during rifting and by subsequent thermal subsidence. Thermal subsidence began around 525 Ma in the Illinois Basin, 520 460 Ma in the Michigan Basin, and 530 500 Ma in the Williston Basin. In the Illinois Basin, a second subsidence episode (middle Mississippian through Early Permian) was caused by flexural foreland subsidence in response to the Alleghanian-Hercynian orogeny. Resurgent Permian rifting in the Illinois Basin is inferred because of intrusion of well-dated Permian alnoites; such intrusive rocks are normally associated with rifting processes. The process of formation of these cratonic basins remains controversial. Past workers have suggested mantle phase changes at the base of the crust, mechanical subsidence in response to isostatically uncompensated excess mass following igneous intrusions, intrusion of mantle plumes into the crust, or regional thermal metamorphic events as causes of basin initiation. Cratonic basins of North America, Europe, Africa, and South America share common ages of formation (around 550 to 500 Ma), histories of sediment accumulation, temporal volume changes of sediment fills, and common dates of interregional unconformities. Their common date of formation suggests initiation of cratonic basins in response to breakup of a late Precambrian super-continent. This supercontinent acted as a heat lens that caused partial melting of the lower crust and upper mantle followed by emplacement of anorogenic granites during extensional tectonics in response to supercontinent breakup. Intrusion of anorogenic granites and other partially melted intrusive rocks weakened continental lithosphere, thus providing a zone of localized regional stretching and permitting formation of cratonic basins almost simultaneously over sites of intrusion of these anorogenic granites and other partially melted intrusive rocks.

  14. Final Status Survey Report for Corrective Action Unit 117 - Pluto Disassembly Facility, Building 2201, Nevada National Security Site, Nevada

    SciTech Connect

    Jeremy Gwin and Douglas Frenette

    2010-09-30

    This document contains the process knowledge, radiological data and subsequent statistical methodology and analysis to support approval for the radiological release of Corrective Action Unit (CAU) 117 – Pluto Disassembly Facility, Building 2201 located in Area 26 of the Nevada National Security Site (NNSS). Preparations for release of the building began in 2009 and followed the methodology described in the Multi-Agency Radiation Survey and Site Investigation Manual (MARSSIM). MARSSIM is the DOE approved process for release of Real Property (buildings and landmasses) to a set of established criteria or authorized limits. The pre-approved authorized limits for surface contamination values and corresponding assumptions were established by DOE O 5400.5. The release criteria coincide with the acceptance criteria of the U10C landfill permit. The U10C landfill is the proposed location to dispose of the radiologically non-impacted, or “clean,” building rubble following demolition. However, other disposition options that include the building and/or waste remaining at the NNSS may be considered providing that the same release limits apply. The Final Status Survey was designed following MARSSIM guidance by reviewing historical documentation and radiological survey data. Following this review a formal radiological characterization survey was performed in two phases. The characterization revealed multiple areas of residual radioactivity above the release criteria. These locations were remediated (decontaminated) and then the surface activity was verified to be less than the release criteria. Once remediation efforts had been successfully completed, a Final Status Survey Plan (10-015, “Final Status Survey Plan for Corrective Action Unit 117 – Pluto Disassembly Facility, Building 2201”) was developed and implemented to complete the final step in the MARSSIM process, the Final Status Survey. The Final Status Survey Plan consisted of categorizing each individual room

  15. Rad51 Nucleoprotein Filament Disassembly Captured Using Fluorescent Plasmodium falciparum SSB as a Reporter for Single-Stranded DNA.

    PubMed

    Davenport, Eric Parker; Harris, Derek F; Origanti, Sofia; Antony, Edwin

    2016-01-01

    Single-stranded DNA binding (SSB) proteins coordinate DNA replication, repair, and recombination and are critical for maintaining genomic integrity. SSB binds to single-stranded DNA (ssDNA) rapidly and with very high affinity making it a useful molecular tool to detect free ssDNA in solution. We have labeled SSB from Plasmodium falciparum (Pf-SSB) with the MDCC (7-diethylamino-3-((((2-maleimidyl)ethyl)amino)-carbonyl)coumarin) fluorophore which yields a four-fold increase in fluorescence upon binding to ssDNA. Pf-SSBMDCC binding to DNA is unaffected by NaCl or Mg2+ concentration and does not display salt-dependent changes in DNA binding modes or cooperative binding on long DNA substrates. These features are unique to Pf-SSB, making it an ideal tool to probe the presence of free ssDNA in any biochemical reaction. Using this Pf-SSBMDCC probe as a sensor for free ssDNA, we have investigated the clearing of preformed yeast Rad51 nucleoprotein filaments by the Srs2 helicase during HR. Our studies provide a rate for the disassembly of the Rad51 filament by full length Srs2 on long ssDNA substrates. Mutations in the conserved 2B domain in the homologous bacterial UvrD, Rep and PcrA helicases show an enhancement of DNA unwinding activity, but similar mutations in Srs2 do not affect its DNA unwinding or Rad51 clearing properties. These studies showcase the utility of the Pf-SSB probe in mechanistic investigation of enzymes that function in DNA metabolism. PMID:27416037

  16. Structural determinants governing S100A4-induced isoform-selective disassembly of nonmuscle myosin II filaments.

    PubMed

    Kiss, Bence; Kalmár, Lajos; Nyitray, László; Pál, Gábor

    2016-06-01

    The Ca(2+) -binding protein S100A4 interacts with the C terminus of nonmuscle myosin IIA (NMIIA) causing filament disassembly, which is correlated with an increased metastatic potential of tumor cells. Despite high sequence similarity of the three NMII isoforms, S100A4 discriminates against binding to NMIIB. We searched for structural determinants of this selectivity. Based on paralog scanning using phage display, we identified a single position as major determinant of isoform selectivity. Reciprocal single amino acid replacements showed that at position 1907 (NMIIA numbering), the NMIIA/NMIIC-specific alanine provides about 60-fold higher affinity than the NMIIB-specific asparagine. The structural background of this can be explained in part by a communication between the two consecutive α-helical binding segments. This communication is completely abolished by the Ala-to-Asn substitution. Mutual swapping of the disordered tailpieces only slightly affects the affinity of the NMII chimeras. Interestingly, we found that the tailpiece and position 1907 act in a nonadditive fashion. Finally, we also found that the higher stability of the C-terminal coiled-coil region of NMIIB also discriminates against interaction with S100A4. Our results clearly show that the isoform-selective binding of S100A4 is determined at multiple levels in the structure of the three NMII isoforms and the corresponding functional elements of NMII act synergistically with one another resulting in a complex interaction network. The experimental and in silico results suggest two divergent evolutionary pathways: NMIIA and NMIIB evolved to possess S100A4-dependent and -independent regulations, respectively. PMID:27029887

  17. The AAA-ATPase molecular chaperone Cdc48/p97 disassembles sumoylated centromeres, decondenses heterochromatin, and activates ribosomal RNA genes

    PubMed Central

    Mérai, Zsuzsanna; Chumak, Nina; García-Aguilar, Marcelina; Hsieh, Tzung-Fu; Nishimura, Toshiro; Schoft, Vera K.; Bindics, János; Ślusarz, Lucyna; Arnoux, Stéphanie; Opravil, Susanne; Mechtler, Karl; Zilberman, Daniel; Fischer, Robert L.; Tamaru, Hisashi

    2014-01-01

    Centromeres mediate chromosome segregation and are defined by the centromere-specific histone H3 variant (CenH3)/centromere protein A (CENP-A). Removal of CenH3 from centromeres is a general property of terminally differentiated cells, and the persistence of CenH3 increases the risk of diseases such as cancer. However, active mechanisms of centromere disassembly are unknown. Nondividing Arabidopsis pollen vegetative cells, which transport engulfed sperm by extended tip growth, undergo loss of CenH3; centromeric heterochromatin decondensation; and bulk activation of silent rRNA genes, accompanied by their translocation into the nucleolus. Here, we show that these processes are blocked by mutations in the evolutionarily conserved AAA-ATPase molecular chaperone, CDC48A, homologous to yeast Cdc48 and human p97 proteins, both of which are implicated in ubiquitin/small ubiquitin-like modifier (SUMO)-targeted protein degradation. We demonstrate that CDC48A physically associates with its heterodimeric cofactor UFD1-NPL4, known to bind ubiquitin and SUMO, as well as with SUMO1-modified CenH3 and mutations in NPL4 phenocopy cdc48a mutations. In WT vegetative cell nuclei, genetically unlinked ribosomal DNA (rDNA) loci are uniquely clustered together within the nucleolus and all major rRNA gene variants, including those rDNA variants silenced in leaves, are transcribed. In cdc48a mutant vegetative cell nuclei, however, these rDNA loci frequently colocalized with condensed centromeric heterochromatin at the external periphery of the nucleolus. Our results indicate that the CDC48ANPL4 complex actively removes sumoylated CenH3 from centromeres and disrupts centromeric heterochromatin to release bulk rRNA genes into the nucleolus for ribosome production, which fuels single nucleus-driven pollen tube growth and is essential for plant reproduction. PMID:25344531

  18. Rad51 Nucleoprotein Filament Disassembly Captured Using Fluorescent Plasmodium falciparum SSB as a Reporter for Single-Stranded DNA

    PubMed Central

    Davenport, Eric Parker; Harris, Derek F.; Origanti, Sofia

    2016-01-01

    Single-stranded DNA binding (SSB) proteins coordinate DNA replication, repair, and recombination and are critical for maintaining genomic integrity. SSB binds to single-stranded DNA (ssDNA) rapidly and with very high affinity making it a useful molecular tool to detect free ssDNA in solution. We have labeled SSB from Plasmodium falciparum (Pf-SSB) with the MDCC (7-diethylamino-3-((((2-maleimidyl)ethyl)amino)-carbonyl)coumarin) fluorophore which yields a four-fold increase in fluorescence upon binding to ssDNA. Pf-SSBMDCC binding to DNA is unaffected by NaCl or Mg2+ concentration and does not display salt-dependent changes in DNA binding modes or cooperative binding on long DNA substrates. These features are unique to Pf-SSB, making it an ideal tool to probe the presence of free ssDNA in any biochemical reaction. Using this Pf-SSBMDCC probe as a sensor for free ssDNA, we have investigated the clearing of preformed yeast Rad51 nucleoprotein filaments by the Srs2 helicase during HR. Our studies provide a rate for the disassembly of the Rad51 filament by full length Srs2 on long ssDNA substrates. Mutations in the conserved 2B domain in the homologous bacterial UvrD, Rep and PcrA helicases show an enhancement of DNA unwinding activity, but similar mutations in Srs2 do not affect its DNA unwinding or Rad51 clearing properties. These studies showcase the utility of the Pf-SSB probe in mechanistic investigation of enzymes that function in DNA metabolism. PMID:27416037

  19. Expert System analysis of non-fuel assembly hardware and spent fuel disassembly hardware: Its generation and recommended disposal

    SciTech Connect

    Williamson, D.A.

    1991-12-31

    Almost all of the effort being expended on radioactive waste disposal in the United States is being focused on the disposal of spent Nuclear Fuel, with little consideration for other areas that will have to be disposed of in the same facilities. one area of radioactive waste that has not been addressed adequately because it is considered a secondary part of the waste issue is the disposal of the various Non-Fuel Bearing Components of the reactor core. These hardware components fall somewhat arbitrarily into two categories: Non-Fuel Assembly (NFA) hardware and Spent Fuel Disassembly (SFD) hardware. This work provides a detailed examination of the generation and disposal of NFA hardware and SFD hardware by the nuclear utilities of the United States as it relates to the Civilian Radioactive Waste Management Program. All available sources of data on NFA and SFD hardware are analyzed with particular emphasis given to the Characteristics Data Base developed by Oak Ridge National Laboratory and the characterization work performed by Pacific Northwest Laboratories and Rochester Gas & Electric. An Expert System developed as a portion of this work is used to assist in the prediction of quantities of NFA hardware and SFD hardware that will be generated by the United States` utilities. Finally, the hardware waste management practices of the United Kingdom, France, Germany, Sweden, and Japan are studied for possible application to the disposal of domestic hardware wastes. As a result of this work, a general classification scheme for NFA and SFD hardware was developed. Only NFA and SFD hardware constructed of zircaloy and experiencing a burnup of less than 70,000 MWD/MTIHM and PWR control rods constructed of stainless steel are considered Low-Level Waste. All other hardware is classified as Greater-ThanClass-C waste.

  20. The AAA-ATPase molecular chaperone Cdc48/p97 disassembles sumoylated centromeres, decondenses heterochromatin, and activates ribosomal RNA genes.

    PubMed

    Mérai, Zsuzsanna; Chumak, Nina; García-Aguilar, Marcelina; Hsieh, Tzung-Fu; Nishimura, Toshiro; Schoft, Vera K; Bindics, János; Slusarz, Lucyna; Arnoux, Stéphanie; Opravil, Susanne; Mechtler, Karl; Zilberman, Daniel; Fischer, Robert L; Tamaru, Hisashi

    2014-11-11

    Centromeres mediate chromosome segregation and are defined by the centromere-specific histone H3 variant (CenH3)/centromere protein A (CENP-A). Removal of CenH3 from centromeres is a general property of terminally differentiated cells, and the persistence of CenH3 increases the risk of diseases such as cancer. However, active mechanisms of centromere disassembly are unknown. Nondividing Arabidopsis pollen vegetative cells, which transport engulfed sperm by extended tip growth, undergo loss of CenH3; centromeric heterochromatin decondensation; and bulk activation of silent rRNA genes, accompanied by their translocation into the nucleolus. Here, we show that these processes are blocked by mutations in the evolutionarily conserved AAA-ATPase molecular chaperone, CDC48A, homologous to yeast Cdc48 and human p97 proteins, both of which are implicated in ubiquitin/small ubiquitin-like modifier (SUMO)-targeted protein degradation. We demonstrate that CDC48A physically associates with its heterodimeric cofactor UFD1-NPL4, known to bind ubiquitin and SUMO, as well as with SUMO1-modified CenH3 and mutations in NPL4 phenocopy cdc48a mutations. In WT vegetative cell nuclei, genetically unlinked ribosomal DNA (rDNA) loci are uniquely clustered together within the nucleolus and all major rRNA gene variants, including those rDNA variants silenced in leaves, are transcribed. In cdc48a mutant vegetative cell nuclei, however, these rDNA loci frequently colocalized with condensed centromeric heterochromatin at the external periphery of the nucleolus. Our results indicate that the CDC48A(NPL4) complex actively removes sumoylated CenH3 from centromeres and disrupts centromeric heterochromatin to release bulk rRNA genes into the nucleolus for ribosome production, which fuels single nucleus-driven pollen tube growth and is essential for plant reproduction. PMID:25344531

  1. The Oquirrh basin revisited

    SciTech Connect

    Erskine, M.C.

    1997-04-01

    The upper Paleozoic succession in the Oquirrh basin in unusually thick, up to 9300 m, and consists mainly of a Pennsylvanian-middle Permian miogeocline of northwestern Utah. Previous workers have suggested a tectonic origin for the Oquirrh basin that is incompatible with the basin location in both time and space. There is no evidence for Pennsylvanian and Lower Permian tectonism in the middle of the miogeocline. Thermal evidence from the Mississippian Mission Canyon shale does no support the implied deep burial of the crustal sag models of basin formation. Stratigraphic and facies evidence indicates a growth fault origin for the basin. Regional isopach maps and facies maps are powerful tools in interpreting depositional environments and in reconstructing fold-and-thrust belts. However, the location of measured sections relative to the location of the growth fault basin. The Charleston-Nebo thrust may have essentially reversed the movement on a growth fault. Thick Oquirrh basin sedimentary rocks may not be required to balance structural sections across this thrust fault. A thin-skinned, extensional growth fault origin for the Oquirrh basin implies that the Cordilleran miogeocline did not participate in the Pennsylvanian north-vergent uplifts of the Ancestral Rocky Mountains.

  2. K Basin safety analysis

    SciTech Connect

    Porten, D.R.; Crowe, R.D.

    1994-12-16

    The purpose of this accident safety analysis is to document in detail, analyses whose results were reported in summary form in the K Basins Safety Analysis Report WHC-SD-SNF-SAR-001. The safety analysis addressed the potential for release of radioactive and non-radioactive hazardous material located in the K Basins and their supporting facilities. The safety analysis covers the hazards associated with normal K Basin fuel storage and handling operations, fuel encapsulation, sludge encapsulation, and canister clean-up and disposal. After a review of the Criticality Safety Evaluation of the K Basin activities, the following postulated events were evaluated: Crane failure and casks dropped into loadout pit; Design basis earthquake; Hypothetical loss of basin water accident analysis; Combustion of uranium fuel following dryout; Crane failure and cask dropped onto floor of transfer area; Spent ion exchange shipment for burial; Hydrogen deflagration in ion exchange modules and filters; Release of Chlorine; Power availability and reliability; and Ashfall.

  3. Reserves in western basins

    SciTech Connect

    Caldwell, R.H.; Cotton, B.W.

    1995-04-01

    The objective of this project is to investigate the reserves potential of tight gas reservoirs in three Rocky Mountain basins: the Greater Green River (GGRB), Uinta and Piceance basins. The basins contain vast gas resources that have been estimated in the thousands of Tcf hosted in low permeability clastic reservoirs. This study documents the productive characteristics of these tight reservoirs, requantifies gas in place resources, and characterizes the reserves potential of each basin. The purpose of this work is to promote understanding of the resource and to encourage its exploitation by private industry. At this point in time, the GGRB work has been completed and a final report published. Work is well underway in the Uinta and Piceance basins which are being handled concurrently, with reports on these basins being scheduled for the middle of this year. Since the GGRB portion of the project has been completed, this presentation win focus upon that basin. A key conclusion of this study was the subdivision of the resource, based upon economic and technological considerations, into groupings that have distinct properties with regard to potential for future producibility, economics and risk profile.

  4. Studies and research concerning BNFP. Spent fuel disassembly and canning program at Barnwell Nuclear Fuel Plant (BNFP) preliminary process assessment studies

    SciTech Connect

    Tepp, H.G.

    1980-10-01

    Studies being performed to assess nuclear fuel disassembly and encapsulation to enhance spent fuel storage have not revealed any conditions which unfavorably impact the feasibility of the concept. The studies are aimed at evaluating various issues warranting resolution preliminary to licensing a facility for this spent fuel management concept. The areas assessed are potential accidents and their results; maximum temperature level of canned fuel rods; radiation exposure to personnel during operation and fuel storage; criticality risks during storage and as a result of abnormal incidents; physical security requirements and material accountability measures; the impact of safeguards on economics; and a license schedule projection.

  5. Study to define an approach for developing a computer-based system capable of automatic, unattended assembly/disassembly of spacecraft, phase 1

    NASA Technical Reports Server (NTRS)

    Nevins, J. L.; Defazio, T. L.; Seltzer, D. S.; Whitney, D. E.

    1981-01-01

    The initial set of requirements for additional studies necessary to implement a space-borne, computer-based work system capable of achieving assembly, disassembly, repair, or maintenance in space were developed. The specific functions required of a work system to perform repair and maintenance were discussed. Tasks and relevant technologies were identified and delineated. The interaction of spacecraft design and technology options, including a consideration of the strategic issues of repair versus retrieval-replacement or destruction by removal were considered along with the design tradeoffs for accomplishing each of the options. A concept system design and its accompanying experiment or test plan were discussed.

  6. Mucin-mediated nanocarrier disassembly for triggered uptake of oligonucleotides as a delivery strategy for the potential treatment of mucosal tumours

    NASA Astrophysics Data System (ADS)

    Martirosyan, A.; Olesen, M. J.; Fenton, R. A.; Kjems, J.; Howard, K. A.

    2016-06-01

    This work demonstrates gastric mucin-triggered nanocarrier disassembly for release of antisense oligonucleotides and consequent unassisted cellular entry as a novel oral delivery strategy. A fluorescence activation-based reporter system was used to investigate the interaction and mucin-mediated disassembly of chitosan-based nanocarriers containing a 13-mer DNA oligonucleotide with a flanked locked RNA nucleic acid gapmer design. Gastric mucins were shown to trigger gapmer release from nanocarriers that was dependent on the interaction time, mucin concentration and N : P ratio with a maximal release at N : P 10. In contrast to siRNA, naked gapmers exhibited uptake into mucus producing HT-MTX mono-cultures and HT-MTX co-cultured with the carcinoma epithelial cell line Caco-2. Importantly, in vivo gapmer uptake was observed in epithelial tissue 30 min post-injection in murine intestinal loops. The findings present a mucosal design-based system tailored for local delivery of oligonucleotides that may maximize the effectiveness of gene silencing therapeutics within tumours at mucosal sites.This work demonstrates gastric mucin-triggered nanocarrier disassembly for release of antisense oligonucleotides and consequent unassisted cellular entry as a novel oral delivery strategy. A fluorescence activation-based reporter system was used to investigate the interaction and mucin-mediated disassembly of chitosan-based nanocarriers containing a 13-mer DNA oligonucleotide with a flanked locked RNA nucleic acid gapmer design. Gastric mucins were shown to trigger gapmer release from nanocarriers that was dependent on the interaction time, mucin concentration and N : P ratio with a maximal release at N : P 10. In contrast to siRNA, naked gapmers exhibited uptake into mucus producing HT-MTX mono-cultures and HT-MTX co-cultured with the carcinoma epithelial cell line Caco-2. Importantly, in vivo gapmer uptake was observed in epithelial tissue 30 min post-injection in murine intestinal

  7. Authorized Limits for the Release of a 25 Ton Locomotive, Serial Number 21547, at the Area 25 Engine Maintenance, Assembly, and Disassembly Facility, Nevada Test Site, Nevada

    SciTech Connect

    Jeremy Gwin and Douglas Frenette

    2010-04-08

    This document contains process knowledge and radiological data and analysis to support approval for release of the 25-ton locomotive, Serial Number 21547, at the Area 25 Engine Maintenance, Assembly, and Disassembly (EMAD) Facility, located on the Nevada Test Site (NTS). The 25-ton locomotive is a small, one-of-a-kind locomotive used to move railcars in support of the Nuclear Engine for Rocket Vehicle Application project. This locomotive was identified as having significant historical value by the Nevada State Railroad Museum in Boulder City, Nevada, where it will be used as a display piece. A substantial effort to characterize the radiological conditions of the locomotive was undertaken by the NTS Management and Operations Contractor, National Security Technologies, LLC (NSTec). During this characterization process, seven small areas on the locomotive had contamination levels that exceeded the NTS release criteria (limits consistent with U.S. Department of Energy [DOE] Order DOE O 5400.5, “Radiation Protection of the Public and the Environment”). The decision was made to perform radiological decontamination of these known accessible impacted areas to further the release process. On February 9, 2010, NSTec personnel completed decontamination of these seven areas to within the NTS release criteria. Although all accessible areas of the locomotive had been successfully decontaminated to within NTS release criteria, it was plausible that inaccessible areas of the locomotive (i.e., those areas on the locomotive where it was not possible to perform radiological surveys) could potentially have contamination above unrestricted release limits. To access the majority of these inaccessible areas, the locomotive would have to be disassembled. A complete disassembly for a full radiological survey could have permanently destroyed parts and would have ruined the historical value of the locomotive. Complete disassembly would also add an unreasonable financial burden for the

  8. Lockwasher Strongly Resists Disassembly

    NASA Technical Reports Server (NTRS)

    Jeffers, Stephanie Z.

    1991-01-01

    Lockwasher designed to prevent counter-rotation and loosening of machine screw once screw tightened. Tabs engage slots in pawl-and-ratchet fashion. Features similar to those of "childproof" cap on pill bottle. Intended to replace cup-washer-and-screwhead combination exposed to high-speed, turbulent flow in turbomachinery.

  9. K Basin Hazard Analysis

    SciTech Connect

    PECH, S.H.

    2000-08-23

    This report describes the methodology used in conducting the K Basins Hazard Analysis, which provides the foundation for the K Basins Final Safety Analysis Report. This hazard analysis was performed in accordance with guidance provided by DOE-STD-3009-94, Preparation Guide for U. S. Department of Energy Nonreactor Nuclear Facility Safety Analysis Reports and implements the requirements of DOE Order 5480.23, Nuclear Safety Analysis Report.

  10. K Basins Hazard Analysis

    SciTech Connect

    WEBB, R.H.

    1999-12-29

    This report describes the methodology used in conducting the K Basins Hazard Analysis, which provides the foundation for the K Basins Safety Analysis Report (HNF-SD-WM-SAR-062, Rev.4). This hazard analysis was performed in accordance with guidance provided by DOE-STD-3009-94, Preparation Guide for U. S. Department of Energy Nonreactor Nuclear Facility Safety Analysis Reports and implements the requirements of DOE Order 5480.23, Nuclear Safety Analysis Report.

  11. Disassembly of the cholinergic postsynaptic apparatus induced by axotomy in mouse sympathetic neurons: the loss of dystrophin and beta-dystroglycan immunoreactivity precedes that of the acetylcholine receptor.

    PubMed

    Zaccaria, M L; De Stefano, M E; Properzi, F; Gotti, C; Petrucci, T C; Paggi, P

    1998-08-01

    In mouse sympathetic superior cervical ganglion (SCG), cortical cytoskeletal proteins such as dystrophin (Dys) and beta1sigma2 spectrin colocalize with beta-dystroglycan (beta-DG), a transmembrane dystrophin-associated protein, and the acetylcholine receptor (AChR) at the postsynaptic specialization. The function of the dystrophin-dystroglycan complex in the organization of the neuronal cholinergic postsynaptic apparatus was studied following changes in the immunoreactivity of these proteins during the disassembly and subsequent reassembly of the postsynaptic specializations induced by axotomy of the ganglionic neurons. After axotomy, a decrease in the number of intraganglionic synapses was observed (t1/2 8 h 45'), preceded by a rapid decline of postsynaptic specializations immunopositive for beta-DG, Dys, and alpha3 AChR subunit (alpha3AChR) (t1/2 3 h 45', 4 h 30' and 6 h, respectively). In contrast, the percentage of postsynaptic densities immunopositive for beta1sigma2 spectrin remained unaltered. When the axotomized neurons began to regenerate their axons, the number of intraganglionic synapses increased, as did that of postsynaptic specializations immunopositive for beta-DG, Dys, and alpha3AChR. The latter number increased more slowly than that of Dys and beta-DG. These observations suggest that in SCG neurons, the dystrophin-dystroglycan complex might play a role in the assembly-disassembly of the postsynaptic apparatus, and is probably involved in the stabilization of AChR clusters. PMID:9720492

  12. Binding-induced autonomous disassembly of aptamer-DNAzyme supersandwich nanostructures for sensitive electrochemiluminescence turn-on detection of ochratoxin A

    NASA Astrophysics Data System (ADS)

    Chen, Ying; Yang, Mengli; Xiang, Yun; Yuan, Ruo; Chai, Yaqin

    2013-12-01

    The self-assembled DNA nanostructure has been one of the most interesting research areas in the field of nanoscience, and the application of the DNA self-assembled nanostructures in biosensing is still in the early stage. In this work, based on the target-induced autonomous disassembly of the aptamer-DNAzyme supersandwich nanostructures, we demonstrated a highly sensitive strategy for electrochemiluminescent (ECL) detection of ochratoxin A (OTA). The aptamer-DNAzyme supersandwich nanostructures, which exhibited significant ECL quenching effect toward the oxygen/persulfate (O2/S2O82-) system, were self-assembled on the gold electrode surface. The presence of the target OTA and the exonuclease (RecJf) resulted in autonomous disassembly of the nanostructures and cyclic reuse of OTA, leading to efficient recovery of the ECL emission and highly sensitive detection of OTA. Our developed method also showed high selectivity against other interference molecules and can be applied for the detection of OTA in real red wine samples, which offers the proposed method opportunities for designing new DNA-based nanostructures for biosensing applications.

  13. Assessment of the impacts of spent fuel disassembly alternatives on the Nuclear Waste Isolation System. [Preparing and packaging spent fuel assemblies for geologic disposal

    SciTech Connect

    Not Available

    1984-07-01

    The objective of this report was to evaluate four possible alternative methods of preparing and packaging spent fuel assemblies for geologic disposal against the Reference Process of unmodified spent fuel. The four alternative processes were: (1) End fitting removal, (2) Fission gas venting and resealing, (3) Fuel bundle disassembly and close packing of fuel pins, and (4) Fuel shearing and immobilization. Systems analysis was used to develop a basis of comparison of the alternatives. Conceptual processes and facility layouts were devised for each of the alternatives, based on technology deemed feasible for the purpose. Assessments were made of 15 principal attributes from the technical, operational, safety/risk, and economic considerations related to each of the alternatives, including both the surface packaging and underground repository operations. Specific attributes of the alternative processes were evaluated by assigning a number for each that expressed its merit relative to the corresponding attribute of the Reference Process. Each alternative process was then ranked by summing the numbers for attributes in each of the four assessment areas and collectively. Fuel bundle disassembly and close packing of fuel pins was ranked the preferred method of disposal of spent fuel. 63 references, 46 figures, 46 tables.

  14. Dynamic light-scattering study on changes in mobility of chromaffin granules in actin network with its assembly and Ca2+-dependent disassembly by gelsolin

    NASA Astrophysics Data System (ADS)

    Fujime, Satoru; Miyamoto, Shigeaki; Funatsu, Takashi; Ishiwata, S.

    1993-06-01

    As a final stage of cell signal transduction, secretory cells release hormones by exocytosis. Before secretory granules contact with the cell membrane for fusion, an actin network barrier must dissociate as a prelude. In order to elucidate dynamical behaviors of secretory granules in actin network, in vitro assembly and disassembly processes of actin networks were examined by means of dynamic light-scattering spectroscopy. We studied actin polymerization in the presence of chromaffin granules isolated from bovine adrenal medullae, and found that the entanglement of actin filaments rapidly formed cages which confined granules in them. We also studied the effect of gelsolin, one of the actin-severing proteins, on the network of actin filaments performed in the presence of chromaffin granules. It turned out that the cages which confined granules rapidly disappeared when gelsolin was added in the presence of free Ca2+ ions. Semiquantitative analyses of dynamic light-scattering spectra permitted us to estimate the changes in the mobility (or translational diffusion coefficient) of chromaffin granules in the actin network with its assembly and Ca2+-dependent disassembly by gelsolin. Based on the present results and some pieces of evidence in literature, a model is proposed for biophysical situations before, during, and after an exocytotic event.

  15. Simultaneous detection of assembly and disassembly of multivalent HA tag and anti-HA antibody in single in-capillary assay.

    PubMed

    Wang, Jianhao; Qin, Yuqin; Qin, Haifang; Liu, Li; Ding, Shumin; Teng, Yiwan; Ji, Junling; Qiu, Lin; Jiang, Pengju

    2016-08-01

    Herein, we have developed an in-capillary assay for simultaneous detection of the assembly and disassembly of the multivalent HA tag peptide and antibody. HA tag with hexahistidine at C terminus (YPYDVPDYAG4 H6 , termed YPYDH6 ) was conjugated with quantum dots (QDs) by metal-affinity force to form a multivalent HA tag (QD-YPYDH6 ). QD-YPYDH6 and monoclonal anti-HA antibody (anti-HA) were sequentially injected into the capillary. They were mixed and assembled inside the capillary. The reaction products were online discriminated and detected by fluorescence coupled capillary electrophoresis (CE-FL). For the in-capillary assay, the binding efficiency of the multivalent HA tag and antibody on was influenced by the molar ratio and injection time. Such novel assay could even give out the self-assembly kinetic constant of QDs and YPYDH6 as KD of 34.1 μM with n (binding cooperativeness) of 2.2 by Hill equation. More importantly, the simultaneous detection of the assembly and imidazole (Im) induced disassembly of the QD-YPYDH6 -anti-HA complex was achieved in a single in-capillary assay. Our study demonstrated a new method for the online detection of antigen-antibody interactions. PMID:27066909

  16. Mucin-mediated nanocarrier disassembly for triggered uptake of oligonucleotides as a delivery strategy for the potential treatment of mucosal tumours.

    PubMed

    Martirosyan, A; Olesen, M J; Fenton, R A; Kjems, J; Howard, K A

    2016-07-01

    This work demonstrates gastric mucin-triggered nanocarrier disassembly for release of antisense oligonucleotides and consequent unassisted cellular entry as a novel oral delivery strategy. A fluorescence activation-based reporter system was used to investigate the interaction and mucin-mediated disassembly of chitosan-based nanocarriers containing a 13-mer DNA oligonucleotide with a flanked locked RNA nucleic acid gapmer design. Gastric mucins were shown to trigger gapmer release from nanocarriers that was dependent on the interaction time, mucin concentration and N : P ratio with a maximal release at N : P 10. In contrast to siRNA, naked gapmers exhibited uptake into mucus producing HT-MTX mono-cultures and HT-MTX co-cultured with the carcinoma epithelial cell line Caco-2. Importantly, in vivo gapmer uptake was observed in epithelial tissue 30 min post-injection in murine intestinal loops. The findings present a mucosal design-based system tailored for local delivery of oligonucleotides that may maximize the effectiveness of gene silencing therapeutics within tumours at mucosal sites. PMID:26694897

  17. Nam Con Son Basin

    SciTech Connect

    Tin, N.T.; Ty, N.D.; Hung, L.T.

    1994-07-01

    The Nam Con Son basin is the largest oil and gas bearing basin in Vietnam, and has a number of producing fields. The history of studies in the basin can be divided into four periods: Pre-1975, 1976-1980, 1981-1989, and 1990-present. A number of oil companies have carried out geological and geophysical studies and conducted drilling activities in the basin. These include ONGC, Enterprise Oil, BP, Shell, Petro-Canada, IPL, Lasmo, etc. Pre-Tertiary formations comprise quartz diorites, granodiorites, and metamorphic rocks of Mesozoic age. Cenozoic rocks include those of the Cau Formation (Oligocene and older), Dua Formation (lower Miocene), Thong-Mang Cau Formation (middle Miocene), Nam Con Son Formation (upper Miocene) and Bien Dong Formation (Pliocene-Quaternary). The basement is composed of pre-Cenozoic formations. Three fault systems are evident in the basin: north-south fault system, northeast-southwest fault system, and east-west fault system. Four tectonic zones can also be distinguished: western differentiated zone, northern differentiated zone, Dua-Natuna high zone, and eastern trough zone.

  18. SURVEY OF CROSS-BASIN BOAT TRAFFIC, ATCHAFALAYA BASIN, LOUISIANA

    EPA Science Inventory

    For flood control and for the preservation and enhancement of environmental quality of overflow swamp habitats, introduction of sediment from the Atchafalaya Basin Main Channel into backwater areas of the Atchafalaya Basin Floodway should be minimized. This introduction occurs ma...

  19. River basin management

    SciTech Connect

    Newsome, D.H.; Edwards, A.M.C.

    1984-01-01

    The quality of water is of paramount importance in the management of water resources - including marine waters. A quantitative knowledge of water quality and the factors governing it is required to formulate and implement strategies requiring an inter-disciplinary approach. The overall purpose of this conference was to bring together the latest work on water quality aspects of river basin management. These proceedings are structured on the basis of five themes: problems in international river basins; the contribution of river systems to estuarial and marine pollution; the setting of standards; monitoring; and practical water quality management including use of mathematical models. They are followed by papers from the workshop on advances in the application of mathematical modelling to water quality management, which represent some of the current thinking on the problems and concepts of river basin management.

  20. Geology, exploration status of Uruguay's sedimentary basins

    SciTech Connect

    Goso, C.; Santa Ana, H. de )

    1994-02-07

    This article attempts to present the geological characteristics and tectonic and sedimentary evolution of Uruguayan basins and the extent to which they have been explored. Uruguay is on the Atlantic coast of South America. The country covers about 318,000 sq km, including offshore and onshore territories corresponding to more than 65% of the various sedimentary basins. Four basins underlie the country: the Norte basin, the Santa Lucia basin, the offshore Punta del Este basin, and the offshore-onshore Pelotas-Merin basin. The Norte basin is a Paleozoic basin while the others are Mesozoic basins. Each basin has been explored to a different extent, as this paper explains.

  1. Trinity river basin, Texas

    USGS Publications Warehouse

    Ulery, Randy L.; Van Metre, Peter C.; Crossfield, Allison S.

    1993-01-01

    In 1991 the Trinity River Basin National Water-Quality Assessment (NAWQA) will include assessments of surface-water and ground-water quality. Initial efforts have focused on identifying water-quality issues in the basin and on the environmental factors underlying those issues. Physical characteristics described include climate, geology, soils, vegetation, physiography, and hydrology. Cultural characteristics discussed include population distribution, land use and land cover, agricultural practices, water use, an reservoir operations. Major water-quality categories are identified and some of the implications of the environmental factors for water quality are presented.

  2. 'East Basin' Panorama

    NASA Technical Reports Server (NTRS)

    2005-01-01

    [figure removed for brevity, see original site] Click on the image for 'East Basin' Panorama (QTVR)

    NASA's Mars Exploration Rover Spirit used its panoramic camera to obtain this view of the impact feature called 'East Basin' to the northeast of 'Husband Hill.' The images combined into this mosaic were taken during Spirit's 653rd Martian day, or sol (Nov. 3, 2005), just before Spirit descended eastward onto 'Haskin Ridge.' The view is about 150 degrees wide. It is an approximately true-color rendering generated using the camera's 750-nanometer, 530-nanometer, and 480-nanometer filters.

    Dark features on the far side of the basin, just left of center in this view, are basaltic sand deposits that were emplaced on the lee sides of hills by northwesterly winds. Haskin Ridge is visible along the right margin of the image, capped by a light-toned layer of rock. Spirit investigated the light-toned rock unit after taking this image. The basaltic plains located east of the 'Columbia Hills' can be seen in the distance beyond 'East Basin.' The rim of Thira crater is just visible on the distant horizon some 15 kilometers (9.3 miles) away.

  3. CSER 94-013: Classification and access to PFP 232-Z Incinerator Facility and limits on characterization and disassembly activities in 232-Z burning hood

    SciTech Connect

    Miller, E.M.

    1995-01-12

    This CSER justifies the Limited Control Facility designation for the closed Burning Hood in the PFP 232-Z Incinerator Facility. If the Burning Hood is opened to characterize the plutonium distribution and geometric integrity of the internals or for disassembly of the internals, then the more rigorous Fissionable Material Facility classification is required. Two sets of requirements apply for personnel access, criticality firefighting category for water use, and fissile material movement for the two states of the Burning Hood. The parameters used in the criticality analysis are listed to establish the limits under which this CSER is valid. Determination that the Burning Hood fissile material, moderation, or internal arrangements are outside these limits requires reevaluation of these parameter values and activities at the 232-Z Incinerator Facility. When the Burning Hood is open, water entry is to be prevented by two physical barriers for each water source.

  4. Autophagy Promotes Focal Adhesion Disassembly and Cell Motility of Metastatic Tumor Cells through the Direct Interaction of Paxillin with LC3.

    PubMed

    Sharifi, Marina N; Mowers, Erin E; Drake, Lauren E; Collier, Chris; Chen, Hong; Zamora, Marta; Mui, Stephanie; Macleod, Kay F

    2016-05-24

    Autophagy is a conserved catabolic process that plays a housekeeping role in eliminating protein aggregates and organelles and is activated during nutrient deprivation to generate metabolites and energy. Autophagy plays a significant role in tumorigenesis, although opposing context-dependent functions of autophagy in cancer have complicated efforts to target autophagy for therapeutic purposes. We demonstrate that autophagy inhibition reduces tumor cell migration and invasion in vitro and attenuates metastasis in vivo. Numerous abnormally large focal adhesions (FAs) accumulate in autophagy-deficient tumor cells, reflecting a role for autophagy in FA disassembly through targeted degradation of paxillin. We demonstrate that paxillin interacts with processed LC3 through a conserved LIR motif in the amino-terminal end of paxillin and that this interaction is regulated by oncogenic SRC activity. Together, these data establish a function for autophagy in FA turnover, tumor cell motility, and metastasis. PMID:27184837

  5. Streamlined Approach for Environmental Restoration Plan for Corrective Action Unit 113: Reactor Maintenance, Assembly, and Disassembly Building Nevada Test Site, Nevada

    SciTech Connect

    J. L. Smith

    2001-01-01

    This Streamlined Approach for Environmental Restoration (SAFER) Plan addresses the action necessary for the closure in place of Corrective Action Unit (CAU) 113 Area 25 Reactor Maintenance, Assembly, and Disassembly Facility (R-MAD). CAU 113 is currently listed in Appendix III of the Federal Facility Agreement and Consent Order (FFACO) (NDEP, 1996). The CAU is located in Area 25 of the Nevada Test Site (NTS) and consists of Corrective Action Site (CAS) 25-04-01, R-MAD Facility (Figures 1-2). This plan provides the methodology for closure in place of CAU 113. The site contains radiologically impacted and hazardous material. Based on preassessment field work, there is sufficient process knowledge to close in place CAU 113 using the SAFER process. At a future date when funding becomes available, the R-MAD Building (25-3110) will be demolished and inaccessible radiologic waste will be properly disposed in the Area 3 Radiological Waste Management Site (RWMS).

  6. Polyinosinic:polycytidylic acid induces protein kinase D–dependent disassembly of apical junctions and barrier dysfunction in airway epithelial cells

    PubMed Central

    Rezaee, Fariba; Meednu, Nida; Emo, Jason A.; Saatian, Bahman; Chapman, Timothy J.; Naydenov, Nayden G.; De Benedetto, Anna; Beck, Lisa A.; Ivanov, Andrei I.; Georas, Steve N.

    2011-01-01

    Background Disruption of the epithelial barrier might be a risk factor for allergen sensitization and asthma. Viral respiratory tract infections are strongly associated with asthma exacerbation, but the effects of respiratory viruses on airway epithelial barrier function are not well understood. Many viruses generate double-stranded RNA, which can lead to airway inflammation and initiate an antiviral immune response. Objectives We investigated the effects of the synthetic double-stranded RNA polyinosinic:polycytidylic acid (polyI:C) on the structure and function of the airway epithelial barrier in vitro. Methods 16HBE14o- human bronchial epithelial cells and primary airway epithelial cells at an air-liquid interface were grown to confluence on Transwell inserts and exposed to polyI:C. We studied epithelial barrier function by measuring transepithelial electrical resistance and paracellular flux of fluorescent markers and structure of epithelial apical junctions by means of immunofluorescence microscopy. Results PolyI:C induced a profound decrease in transepithelial electrical resistance and increase in paracellular permeability. Immunofluorescence microscopy revealed markedly reduced junctional localization of zonula occludens-1, occludin, E-cadherin, β-catenin, and disorganization of junction-associated actin filaments. PolyI:C induced protein kinase D (PKD) phosphorylation, and a PKD antagonist attenuated polyI:C-induced disassembly of apical junctions and barrier dysfunction. Conclusions PolyI:C has a powerful and previously unsuspected disruptive effect on the airway epithelial barrier. PolyI:C-dependent barrier disruption is mediated by disassembly of epithelial apical junctions, which is dependent on PKD signaling. These findings suggest a new mechanism potentially underlying the associations between viral respiratory tract infections, airway inflammation, and allergen sensitization. PMID:21996340

  7. The activity of the histone chaperone yeast Asf1 in the assembly and disassembly of histone H3/H4–DNA complexes

    PubMed Central

    Donham, Douglas C.; Scorgie, Jean K.; Churchill, Mair E. A.

    2011-01-01

    The deposition of the histones H3/H4 onto DNA to give the tetrasome intermediate and the displacement of H3/H4 from DNA are thought to be the first and the last steps in nucleosome assembly and disassembly, respectively. Anti-silencing function 1 (Asf1) is a chaperone of the H3/H4 dimer that functions in both of these processes. However, little is known about the thermodynamics of chaperone–histone interactions or the direct role of Asf1 in the formation or disassembly of histone–DNA complexes. Here, we show that Saccharomyces cerevisiae Asf1 shields H3/H4 from unfavorable DNA interactions and aids the formation of favorable histone–DNA interactions through the formation of disomes. However, Asf1 was unable to disengage histones from DNA for tetrasomes formed with H3/H4 and strong nucleosome positioning DNA sequences or tetrasomes weakened by mutant (H3K56Q/H4) histones or non-positioning DNA sequences. Furthermore, Asf1 did not associate with preformed tetrasomes. These results are consistent with the measured affinity of Asf1 for H3/H4 dimers of 2.5 nM, which is weaker than the association of H3/H4 for DNA. These studies support a mechanism by which Asf1 aids H3/H4 deposition onto DNA but suggest that additional factors or post-translational modifications are required for Asf1 to remove H3/H4 from tetrasome intermediates in chromatin. PMID:21447559

  8. The Nucleoid Occlusion SlmA Protein Accelerates the Disassembly of the FtsZ Protein Polymers without Affecting Their GTPase Activity

    PubMed Central

    Cabré, Elisa J.; Monterroso, Begoña; Alfonso, Carlos; Sánchez-Gorostiaga, Alicia; Reija, Belén; Jiménez, Mercedes

    2015-01-01

    Division site selection is achieved in bacteria by different mechanisms, one of them being nucleoid occlusion, which prevents Z-ring assembly nearby the chromosome. Nucleoid occlusion in E. coli is mediated by SlmA, a sequence specific DNA binding protein that antagonizes FtsZ assembly. Here we show that, when bound to its specific target DNA sequences (SBS), SlmA reduces the lifetime of the FtsZ protofilaments in solution and of the FtsZ bundles when located inside permeable giant vesicles. This effect appears to be essentially uncoupled from the GTPase activity of the FtsZ protofilaments, which is insensitive to the presence of SlmA·SBS. The interaction of SlmA·SBS with either FtsZ protofilaments containing GTP or FtsZ oligomers containing GDP results in the disassembly of FtsZ polymers. We propose that SlmA·SBS complexes control the polymerization state of FtsZ by accelerating the disassembly of the FtsZ polymers leading to their fragmentation into shorter species that are still able to hydrolyze GTP at the same rate. SlmA defines therefore a new class of inhibitors of the FtsZ ring different from the SOS response regulator SulA and from the moonlighting enzyme OpgH, inhibitors of the GTPase activity. SlmA also shows differences compared with MinC, the inhibitor of the division site selection Min system, which shortens FtsZ protofilaments by interacting with the GDP form of FtsZ. PMID:25950808

  9. Role of TRIM5α RING domain E3 ubiquitin ligase activity in capsid disassembly, reverse transcription blockade, and restriction of simian immunodeficiency virus.

    PubMed

    Kim, Jonghwa; Tipper, Christopher; Sodroski, Joseph

    2011-08-01

    The mammalian tripartite motif protein, TRIM5α, recognizes retroviral capsids entering the cytoplasm and blocks virus infection. Depending on the particular TRIM5α protein and retrovirus, complete disruption of the TRIM5α RING domain decreases virus-restricting activity to various degrees. TRIM5α exhibits RING domain-dependent E3 ubiquitin ligase activity, but the specific role of this activity in viral restriction is unknown. We created a panel of African green monkey TRIM5α (TRIM5α(AGM)) mutants, many of which are specifically altered in RING domain E3 ubiquitin ligase function, and characterized the phenotypes of these mutants with respect to restriction of simian and human immunodeficiency viruses (SIV(mac) and HIV-1, respectively). TRIM5α(AGM) ubiquitin ligase activity was essential for both the accelerated disassembly of SIV(mac) capsids and the disruption of reverse transcription. The levels of SIV(mac) particulate capsids in the cytosol of target cells expressing the TRIM5α variants strongly correlated with the levels of viral late reverse transcripts. RING-mediated ubiquitylation and B30.2(SPRY) domain-determined capsid binding independently contributed to the potency of SIV(mac) restriction by TRIM5α(AGM). In contrast, TRIM5α proteins attenuated in RING ubiquitin ligase function still accelerated HIV-1 capsid disassembly, inhibited reverse transcription, and blocked infection. Replacement of the helix-4/5 loop in the SIV(mac) capsid with the corresponding region of the HIV-1 capsid diminished the dependence of restriction on TRIM5α RING function. Thus, ubiquitylation mediated by the RING domain of TRIM5α(AGM) is essential for blocking SIV(mac) infection at the stage of capsid uncoating. PMID:21680520

  10. Bransfield Basin and Cordilleran Orogenesis

    NASA Astrophysics Data System (ADS)

    Dalziel, I. W.; Austin, J. A.; Barker, D. H.; Christensen, G. L.

    2003-12-01

    Tectonic uplift of the Andean Cordillera was initiated in the mid-Cretaceous with inversion of a composite marginal basin along 7500 km of the continental margin of South America, from Peru to Tierra del Fuego and the North Scotia Ridge. In the southernmost Andes, from 50-56 degrees S, the quasi-oceanic floor of this basin is preserved in the obducted ophiolitic rocks of the Rocas Verdes (Green Rocks) basin. We suggest that the basin beneath Bransfield Strait, 61-64 degrees S, separating the South Shetland Islands from the Antarctic Peninsula, constitutes a modern analog for the Rocas Verdes basin. Marine geophysical studies of Bransfield basin have been undertaken over the past 12 years by the Institute for Geophysics, University of Texas at Austin, under the auspices of the Ocean Sciences Division and United States Antarctic Program, National Science Foundation. These studies have elucidated the structure and evolution of Bransfield basin for comparison with the Rocas Verdes basin, with a view to eventual forward modeling of the evolution of a hypothetical cordilleran orogen by compression and inversion of the basin. These are the processes that can be observed in the tectonic transformation of the Rocas Verdes basin into the southernmost Andean cordillera, as South America moved rapidly westward in an Atlantic-Indian ocean hot-spot reference frame during the mid-Cretaceous. Multi-channel reflection seismic data from the Bransfield basin reveal an asymmetric structural architecture characterized by steeply-dipping normal faults flanking the South Shetlands island arc and gently dipping listric normal faults along the Antarctic Peninsula margin. Normal fault polarity reversals appear to be related to distributed loci of magmatic activity within the basin. This architecture is remarkably similar to that deduced from field structural studies of the Rocas Verdes basin. Notably, the oceanward-dipping, low angle normal faults along the Antarctic Peninsula margin

  11. Newly Discovered Martian Impact Basins

    NASA Technical Reports Server (NTRS)

    Stam, M.

    1985-01-01

    Three previously unrecognized Martian impact basins were discovered through detailed mapping of landforms, structures and terrains near Cassini and Al Qahira basins. Al Qahira A lies on the Martian dichotomy boundary and intersects the older basin, Al Qahira. It has four rings that are expressed by a variety of landforms. Southwestward Al Qahira A is out by a younger Basin, Al Qahira B. Al Qahira B is a highly degraded basin with one identifiable ring. Its ring is expressed by a few massifs, knobs and inward-facing scarps, but is recognized by the distributions of wrinkle ridges and plains units. Cassini A lies southward of the younger Cassini Basin and is intersected by it. It probably has four rings. The importance of detailed mapping of various types of landforms and terrains to the discovery of basins on Mars are demonstrated.

  12. Natural frequency of regular basins

    NASA Astrophysics Data System (ADS)

    Tjandra, Sugih S.; Pudjaprasetya, S. R.

    2014-03-01

    Similar to the vibration of a guitar string or an elastic membrane, water waves in an enclosed basin undergo standing oscillatory waves, also known as seiches. The resonant (eigen) periods of seiches are determined by water depth and geometry of the basin. For regular basins, explicit formulas are available. Resonance occurs when the dominant frequency of external force matches the eigen frequency of the basin. In this paper, we implement the conservative finite volume scheme to 2D shallow water equation to simulate resonance in closed basins. Further, we would like to use this scheme and utilizing energy spectra of the recorded signal to extract resonant periods of arbitrary basins. But here we first test the procedure for getting resonant periods of a square closed basin. The numerical resonant periods that we obtain are comparable with those from analytical formulas.

  13. Global analysis of intraplate basins

    NASA Astrophysics Data System (ADS)

    Heine, C.; Mueller, D. R.; Dyksterhuis, S.

    2005-12-01

    Broad intraplate sedimentary basins often show a mismatch of lithospheric extension factors compared to those inferred from sediment thickness and subsidence modelling, not conforming to the current understanding of rift basin evolution. Mostly, these basins are underlain by a very heterogeneous and structurally complex basement which has been formed as a product of Phanerozoic continent-continent or terrane/arc-continent collision and is usually referred to as being accretionary. Most likely, the basin-underlying substrate is one of the key factors controlling the style of extension. In order to investigate and model the geodynamic framework and mechanics controlling formation and evolution of these long-term depositional regions, we have been analysing a global set of more than 200 basins using various remotely sensed geophysical data sets and relational geospatial databases. We have compared elevation, crustal and sediment thickness, heatflow, crustal structure, basin ages and -geometries with computed differential beta, anomalous tectonic subsidence, and differential extension factor grids for these basins. The crust/mantle interactions in the basin regions are investigated using plate tectonic reconstructions in a mantle convection framework for the last 160 Ma. Characteristic parameters and patterns derived from this global analysis are then used to generate a classification scheme, to estimate the misfit between models derived from either crustal thinning or sediment thickness, and as input for extension models using particle-in-cell finite element codes. Basins with high differential extension values include the ``classical'' intraplate-basins, like the Michigan Basin in North America, the Zaire Basin in Africa, basins of the Arabian Penisula, and the West Siberian Basin. According to our global analysis so far, these basins show, that with increasing basin age, the amount of crustal extension vs. the extension values estimated from sediment thickness

  14. Buried-euxenic-basin model sets Tarim basin potential

    SciTech Connect

    Hsu, K.J. )

    1994-11-28

    The Tarim basin is the largest of the three large sedimentary basins of Northwest China. The North and Southwest depressions of Tarim are underlain by thick sediments and very thin crust. The maximum sediment thickness is more than 15 km. Of the several oil fields of Tarim, the three major fields were discovered during the last decade, on the north flank of the North depression and on the Central Tarim Uplift. The major targets of Tarim, according to the buried-euxenic-basin model, should be upper Paleozoic and lower Mesozoic reservoirs trapping oil and gas condensates from lower Paleozoic source beds. The paper describes the basin and gives a historical perspective of exploration activities and discoveries. It then explains how this basin can be interpreted by the buried-euxenic-basin model. The buried-euxenic-basin model postulates four stages of geologic evolution: (1) Sinian and early Paleozoic platform sedimentation on relic arcs and deep-marine sedimentation in back-arc basins in Xinjiang; (2) Late Paleozoic foreland-basin sedimentation in north Tarim; (3) Mesozoic and Paleogene continental deposition, subsidence under sedimentary load; and (4) Neogene pull-apart basin, wrench faulting and extension.

  15. Canada Basin revealed

    USGS Publications Warehouse

    Mosher, David C.; Shimeld, John; Hutchinson, Deborah R.; Chian, D; Lebedeva-Ivanova, Nina; Jackson, Ruth

    2012-01-01

    More than 15,000 line-km of new regional seismic reflection and refraction data in the western Arctic Ocean provide insights into the tectonic and sedimentologic history of Canada Basin, permitting development of new geologic understanding in one of Earth's last frontiers. These new data support a rotational opening model for southern Canada Basin. There is a central basement ridge possibly representing an extinct spreading center with oceanic crustal velocities and blocky basement morphology characteristic of spreading centre crust surrounding this ridge. Basement elevation is lower in the south, mostly due to sediment loading subsidence. The sedimentary succession is thickest in the southern Beaufort Sea region, reaching more than 15 km, and generally thins to the north and west. In the north, grabens and half-grabens are indicative of extension. Alpha-Mendeleev Ridge is a large igneous province in northern Amerasia Basin, presumably emplaced synchronously with basin formation. It overprints most of northern Canada Basin structure. The seafloor and sedimentary succession of Canada Basin is remarkably flat-lying in its central region, with little bathymetric change over most of its extent. Reflections that correlate over 100s of kms comprise most of the succession and on-lap bathymetric and basement highs. They are interpreted as representing deposits from unconfined turbidity current flows. Sediment distribution patterns reflect changing source directions during the basin’s history. Initially, probably late Cretaceous to Paleocene synrift sediments sourced from the Alaska and Mackenzie-Beaufort margins. This unit shows a progressive series of onlap unconformities with a younging trend towards Alpha and Northwind ridges, likely a response to contemporaneous subsidence. Sediment source direction appeared to shift to the Canadian Arctic Archipelago margin for the Eocene and Oligocene, likely due to uplift of Arctic islands during the Eurekan Orogeny. The final

  16. Mercury's Caloris Basin

    NASA Technical Reports Server (NTRS)

    2001-01-01

    Mercury: Computer Photomosaic of the Caloris Basin

    The largest basin on Mercury (1300 km or 800 miles across) was named Caloris (Greek for 'hot') because it is one of the two areas on the planet that face the Sun at perihelion.

    The Image Processing Lab at NASA's Jet Propulsion Laboratory produced this photomosaic using computer software and techniques developed for use in processing planetary data. The Mariner 10 spacecraft imaged the region during its initial flyby of the planet.

    The Mariner 10 spacecraft was launched in 1974. The spacecraft took images of Venus in February 1974 on the way to three encounters with Mercury in March and September 1974 and March 1975. The spacecraft took more than 7,000 images of Mercury, Venus, the Earth and the Moon during its mission.

    The Mariner 10 Mission was managed by the Jet Propulsion Laboratory for NASA's Office of Space Science in Washington, D.C.

  17. ADVANCED CHEMISTRY BASINS MODEL

    SciTech Connect

    William Goddard III; Lawrence Cathles III; Mario Blanco; Paul Manhardt; Peter Meulbroek; Yongchun Tang

    2004-05-01

    The advanced Chemistry Basin Model project has been operative for 48 months. During this period, about half the project tasks are on projected schedule. On average the project is somewhat behind schedule (90%). Unanticipated issues are causing model integration to take longer then scheduled, delaying final debugging and manual development. It is anticipated that a short extension will be required to fulfill all contract obligations.

  18. Petroleum basin studies

    SciTech Connect

    Shannon, P.M. ); Naylor, D. )

    1989-01-01

    This book reviews the tectonic setting, basin development and history of exploration of a number of selected petroleum provinces located in a variety of settings in the Middle East, North Sea, Nigeria, the Rocky Mountains, Gabon and China. This book illustrates how ideas and models developed in one area may be applied to other regions. Regional reviews and the reassessment of petroleum provinces are presented.

  19. Albuquerque Basin seismic network

    USGS Publications Warehouse

    Jaksha, Lawrence H.; Locke, Jerry; Thompson, J.B.; Garcia, Alvin

    1977-01-01

    The U.S. Geological Survey has recently completed the installation of a seismic network around the Albuquerque Basin in New Mexico. The network consists of two seismometer arrays, a thirteen-station array monitoring an area of approximately 28,000 km 2 and an eight-element array monitoring the area immediately adjacent to the Albuquerque Seismological Laboratory. This report describes the instrumentation deployed in the network.

  20. Dimension of fractal basin boundaries

    SciTech Connect

    Park, B.S.

    1988-01-01

    In many dynamical systems, multiple attractors coexist for certain parameter ranges. The set of initial conditions that asymptotically approach each attractor is its basin of attraction. These basins can be intertwined on arbitrary small scales. Basin boundary can be either smooth or fractal. Dynamical systems that have fractal basin boundary show final state sensitivity of the initial conditions. A measure of this sensitivity (uncertainty exponent {alpha}) is related to the dimension of the basin boundary d = D - {alpha}, where D is the dimension of the phase space and d is the dimension of the basin boundary. At metamorphosis values of the parameter, there might happen a conversion from smooth to fractal basin boundary (smooth-fractal metamorphosis) or a conversion from fractal to another fractal basin boundary characteristically different from the previous fractal one (fractal-fractal metamorphosis). The dimension changes continuously with the parameter except at the metamorphosis values where the dimension of the basin boundary jumps discontinuously. We chose the Henon map and the forced damped pendulum to investigate this. Scaling of the basin volumes near the metamorphosis values of the parameter is also being studied for the Henon map. Observations are explained analytically by using low dimensional model map.

  1. Advanced Chemistry Basins Model

    SciTech Connect

    William Goddard; Mario Blanco; Lawrence Cathles; Paul Manhardt; Peter Meulbroek; Yongchun Tang

    2002-11-10

    The DOE-funded Advanced Chemistry Basin model project is intended to develop a public domain, user-friendly basin modeling software under PC or low end workstation environment that predicts hydrocarbon generation, expulsion, migration and chemistry. The main features of the software are that it will: (1) afford users the most flexible way to choose or enter kinetic parameters for different maturity indicators; (2) afford users the most flexible way to choose or enter compositional kinetic parameters to predict hydrocarbon composition (e.g., gas/oil ratio (GOR), wax content, API gravity, etc.) at different kerogen maturities; (3) calculate the chemistry, fluxes and physical properties of all hydrocarbon phases (gas, liquid and solid) along the primary and secondary migration pathways of the basin and predict the location and intensity of phase fractionation, mixing, gas washing, etc.; and (4) predict the location and intensity of de-asphaltene processes. The project has be operative for 36 months, and is on schedule for a successful completion at the end of FY 2003.

  2. Great Basin Paleontological Bibliography

    USGS Publications Warehouse

    Blodgett, Robert B.; Zhang, Ning; Hofstra, Albert H.; Morrow, Jared R.

    2007-01-01

    Introduction This work was conceived as a derivative product for 'The Metallogeny of the Great Basin' project of the Mineral Resources Program of the U.S. Geological Survey. In the course of preparing a fossil database for the Great Basin that could be accessed from the Internet, it was determined that a comprehensive paleontological bibliography must first be compiled, something that had not previously been done. This bibliography includes published papers and abstracts as well as unpublished theses and dissertations on fossils and stratigraphy in Nevada and adjoining portions of California and Utah. This bibliography is broken into first-order headings by geologic age, secondary headings by taxonomic group, followed by ancillary topics of interest to both paleontologists and stratigraphers; paleoecology, stratigraphy, sedimentary petrology, paleogeography, tectonics, and petroleum potential. References were derived from usage of Georef, consultation with numerous paleontologists and geologists working in the Great Basin, and literature currently on hand with the authors. As this is a Web-accessible bibliography, we hope to periodically update it with new citations or older references that we have missed during this compilation. Hence, the authors would be grateful to receive notice of any new or old papers that the readers think should be added. As a final note, we gratefully acknowledge the helpful reviews provided by A. Elizabeth J. Crafford (Anchorage, Alaska) and William R. Page (USGS, Denver, Colorado).

  3. Caribbean basin framework, 3: Southern Central America and Colombian basin

    SciTech Connect

    Kolarsky, R.A.; Mann, P. )

    1991-03-01

    The authors recognize three basin-forming periods in southern Central America (Panama, Costa Rica, southern Nicaragua) that they attempt to correlate with events in the Colombian basin (Bowland, 1984): (1) Early-Late Cretaceous island arc formation and growth of the Central American island arc and Late Cretaceous formation of the Colombian basin oceanic plateau. During latest Cretaceous time, pelagic carbonate sediments blanketed the Central American island arc in Panama and Costa Rica and elevated blocks on the Colombian basin oceanic plateau; (2) middle Eocene-middle Miocene island arc uplift and erosion. During this interval, influx of distal terrigenous turbidites in most areas of Panama, Costa Rica, and the Colombian basin marks the uplift and erosion of the Central American island arc. In the Colombian basin, turbidites fill in basement relief and accumulate to thicknesses up to 2 km in the deepest part of the basin. In Costa Rica, sedimentation was concentrated in fore-arc (Terraba) and back-arc (El Limon) basins; (3) late Miocene-Recent accelerated uplift and erosion of segments of the Central American arc. Influx of proximal terrigenous turbidites and alluvial fans in most areas of Panama, Costa Rica, and the Colombian basin marks collision of the Panama arc with the South American continent (late Miocene early Pliocene) and collision of the Cocos Ridge with the Costa Rican arc (late Pleistocene). The Cocos Ridge collision inverted the Terraba and El Limon basins. The Panama arc collision produced northeast-striking left-lateral strike-slip faults and fault-related basins throughout Panama as Panama moved northwest over the Colombian basin.

  4. Great Basin paleontological database

    USGS Publications Warehouse

    Zhang, N.; Blodgett, R.B.; Hofstra, A.H.

    2008-01-01

    The U.S. Geological Survey has constructed a paleontological database for the Great Basin physiographic province that can be served over the World Wide Web for data entry, queries, displays, and retrievals. It is similar to the web-database solution that we constructed for Alaskan paleontological data (www.alaskafossil.org). The first phase of this effort was to compile a paleontological bibliography for Nevada and portions of adjacent states in the Great Basin that has recently been completed. In addition, we are also compiling paleontological reports (Known as E&R reports) of the U.S. Geological Survey, which are another extensive source of l,egacy data for this region. Initial population of the database benefited from a recently published conodont data set and is otherwise focused on Devonian and Mississippian localities because strata of this age host important sedimentary exhalative (sedex) Au, Zn, and barite resources and enormons Carlin-type An deposits. In addition, these strata are the most important petroleum source rocks in the region, and record the transition from extension to contraction associated with the Antler orogeny, the Alamo meteorite impact, and biotic crises associated with global oceanic anoxic events. The finished product will provide an invaluable tool for future geologic mapping, paleontological research, and mineral resource investigations in the Great Basin, making paleontological data acquired over nearly the past 150 yr readily available over the World Wide Web. A description of the structure of the database and the web interface developed for this effort are provided herein. This database is being used ws a model for a National Paleontological Database (which we am currently developing for the U.S. Geological Survey) as well as for other paleontological databases now being developed in other parts of the globe. ?? 2008 Geological Society of America.

  5. Apollo Basin, Moon: Estimation of Impact Conditions

    NASA Astrophysics Data System (ADS)

    Echaurren, J. C.

    2015-07-01

    The Apollo Basin is a, pre-Nectarian, multi-ring basin located within the large South Pole-Aitken Basin (SPA). Multispectral data from both Galileo and Clementine showed that the composition of materials in Apollo is distinct…

  6. Advanced Chemistry Basins Model

    SciTech Connect

    Blanco, Mario; Cathles, Lawrence; Manhardt, Paul; Meulbroek, Peter; Tang, Yongchun

    2003-02-13

    The objective of this project is to: (1) Develop a database of additional and better maturity indicators for paleo-heat flow calibration; (2) Develop maturation models capable of predicting the chemical composition of hydrocarbons produced by a specific kerogen as a function of maturity, heating rate, etc.; assemble a compositional kinetic database of representative kerogens; (3) Develop a 4 phase equation of state-flash model that can define the physical properties (viscosity, density, etc.) of the products of kerogen maturation, and phase transitions that occur along secondary migration pathways; (4) Build a conventional basin model and incorporate new maturity indicators and data bases in a user-friendly way; (5) Develop an algorithm which combines the volume change and viscosities of the compositional maturation model to predict the chemistry of the hydrocarbons that will be expelled from the kerogen to the secondary migration pathways; (6) Develop an algorithm that predicts the flow of hydrocarbons along secondary migration pathways, accounts for mixing of miscible hydrocarbon components along the pathway, and calculates the phase fractionation that will occur as the hydrocarbons move upward down the geothermal and fluid pressure gradients in the basin; and (7) Integrate the above components into a functional model implemented on a PC or low cost workstation.

  7. Atlantic marginal basins of Africa

    SciTech Connect

    Moore, G.T.

    1988-02-01

    The over 10,000-km long Atlantic margin of Africa is divisible into thirty basins or segments of the margin that collectively contain over 18.6 x 10/sup 6/ km/sup 3/ of syn-breakup and post-breakup sediments. Twenty of these basins contain a sufficiently thick volume of sediments to be considered prospects. These basins lie, at least partially, within the 200 m isobath. The distribution of source rocks is broad enough to give potential to each of these basins. The sedimentation patterns, tectonics, and timing of events differ from basin to basin and are related directly to the margin's complex history. Two spreading modes exist: rift and transform. Rifting dates from Late Triassic-Early Jurassic in the northwest to Early Cretaceous south of the Niger Delta. A complex transform fault system separated these two margins. Deep-water communication between the two basins became established in the middle Cretaceous. This Mesozoic-Cenozoic cycle of rifting and seafloor spreading has segmented the margin and where observable, basins tend to be bounded by these segments.

  8. MASSACHUSETTS DRAINAGE SUB-BASINS

    EPA Science Inventory

    MassGIS has produced a statewide digital datalayer of the approximately 2300 sub-basins as defined and used by the USGS Water Resources Division and the Mass Water Resources Commission and as modified by Executive Office of Environmental Affairs (EOEA) agencies. These sub-basins...

  9. Telomere targeting with a novel G-quadruplex-interactive ligand BRACO-19 induces T-loop disassembly and telomerase displacement in human glioblastoma cells.

    PubMed

    Zhou, Guangtong; Liu, Xinrui; Li, Yunqian; Xu, Songbai; Ma, Chengyuan; Wu, Xinmin; Cheng, Ye; Yu, Zhiyun; Zhao, Gang; Chen, Yong

    2016-03-22

    Interference with telomerase and telomere maintenance is emerging as an attractive target for anticancer therapies. Ligand-induced stabilization of G-quadruplex formation by the telomeric DNA 3'-overhang inhibits telomerase from catalyzing telomeric DNA synthesis and from capping telomeric ends, making these ligands good candidates for chemotherapeutic purposes. BRACO-19 is one of the most effective and specific ligand for telomeric G4. It is shown here that BRACO-19 suppresses proliferation and reduces telomerase activity in human glioblastoma cells, paralleled by the displacement of telomerase from nuclear to cytoplasm. Meanwhile, BRACO-19 triggers extensive DNA damage response at telomere, which may result from uncapping and disassembly of telomeric T-loop structure, characterized by the formation of anaphase bridge and telomere fusion, as well as the release of telomere-binding protein from telomere. The resulting dysfunctional telomere ultimately provokes p53 and p21-mediated cell cycle arrest, apoptosis and senescence. Notably, normal primary astrocytes do not respond to the treatment of BRACO-19, suggesting the agent's good selectivity for cancer cells. These results reinforce the notion that G-quadruplex binding compounds can act as broad inhibitors of telomere-related processes and have potential as selective antineoplastic drugs for various tumors including malignant gliomas. PMID:26908447

  10. Cdc42 and p190RhoGAP activation by CCN2 regulates cell spreading and polarity and induces actin disassembly in migrating keratinocytes.

    PubMed

    Kiwanuka, Elizabeth; Lee, Cameron Cy; Hackl, Florian; Caterson, Edward J; Junker, Johan Pe; Gerdin, Bengt; Eriksson, Elof

    2016-06-01

    Cell migration requires spatiotemporal integration of signals that regulate cytoskeletal dynamics. In response to a migration-promoting agent, cells begin to polarise and extend protrusions in the direction of migration. These cytoskeletal rearrangements are orchestrated by a variety of proteins, including focal adhesion kinase (FAK) and the Rho family of GTPases. CCN2, also known as connective tissue growth factor, has emerged as a regulator of cell migration but the mechanism by which CCN2 regulates keratinocyte function is not well understood. In this article, we sought to elucidate the basic mechanism of CCN2-induced cell migration in human keratinocytes. Immunohistochemical staining was used to demonstrate that treatment with CCN2 induces a migratory phenotype through actin disassembly, spreading of lamellipodia and re-orientation of the Golgi. In vitro assays were used to show that CCN2-induced cell migration is dependent on FAK, RhoA and Cdc42, but independent of Rac1. CCN2-treated keratinocytes displayed increased Cdc42 activity and decreased RhoA activity up to 12 hours post-treatment, with upregulation of p190RhoGAP. An improved understanding of how CCN2 regulates cell migration may establish the foundation for future therapeutics in fibrotic and neoplastic diseases. PMID:25185742

  11. Results of brine flow testing and disassembly of a crushed salt/bentonite block seal at the Waste Isolation Pilot Plant

    SciTech Connect

    Finley, R.E.; Jones, R.L.

    1994-03-01

    The Small-Scale Seal Performance Tests, Series C, a set of in situ experiments conducted at the Waste Isolation Pilot Plant, are designed to evaluate the performance of various seal materials emplaced in large (0.9-m-diameter) boreholes. This report documents the results of fluid (brine) flow testing and water and clay content analyses performed on one emplaced seal comprised of 100% salt blocks and 50%/50% crushed salt/bentonite blocks and disassembled after nearly three years of brine injection testing. Results from the water content analyses of 212 samples taken from within this seal show uniform water content throughout the 50%/50% salt/bentonite blocks with saturations about 100%. Clay content analyses from the 100% salt endcaps of the seal show a background clay content of about 1% by weight uniformly distributed, with the exception of samples taken at the base of the seal at the borehole wall interface. These samples show clay contents up to 3% by weight, which suggests some bentonite may have migrated under pressure to that interface. Results of the brine-flow testing show that the permeability to brine for this seal was about 2 to 3 {times} 10{sup {minus}4} darcy (2 to 3 {times} 10{sup {minus}16} m{sup 2}).

  12. Telomere targeting with a novel G-quadruplex-interactive ligand BRACO-19 induces T-loop disassembly and telomerase displacement in human glioblastoma cells

    PubMed Central

    Zhou, Guangtong; Liu, Xinrui; Li, Yunqian; Xu, Songbai; Ma, Chengyuan; Wu, Xinmin; Cheng, Ye; Yu, Zhiyun; Zhao, Gang; Chen, Yong

    2016-01-01

    Interference with telomerase and telomere maintenance is emerging as an attractive target for anticancer therapies. Ligand-induced stabilization of G-quadruplex formation by the telomeric DNA 3′-overhang inhibits telomerase from catalyzing telomeric DNA synthesis and from capping telomeric ends, making these ligands good candidates for chemotherapeutic purposes. BRACO-19 is one of the most effective and specific ligand for telomeric G4. It is shown here that BRACO-19 suppresses proliferation and reduces telomerase activity in human glioblastoma cells, paralleled by the displacement of telomerase from nuclear to cytoplasm. Meanwhile, BRACO-19 triggers extensive DNA damage response at telomere, which may result from uncapping and disassembly of telomeric T-loop structure, characterized by the formation of anaphase bridge and telomere fusion, as well as the release of telomere-binding protein from telomere. The resulting dysfunctional telomere ultimately provokes p53 and p21-mediated cell cycle arrest, apoptosis and senescence. Notably, normal primary astrocytes do not respond to the treatment of BRACO-19, suggesting the agent's good selectivity for cancer cells. These results reinforce the notion that G-quadruplex binding compounds can act as broad inhibitors of telomere-related processes and have potential as selective antineoplastic drugs for various tumors including malignant gliomas. PMID:26908447

  13. Light-triggered assembly-disassembly of an ordered donor-acceptor π-stack using a photoresponsive dimethyldihydropyrene π-switch.

    PubMed

    Krishna, V Siva Rama; Samanta, Mousumi; Pal, Suman; Anurag, N P; Bandyopadhyay, Subhajit

    2016-06-28

    Self-organization of donor and acceptor π-systems forms alternate D-A stacks of the donor and acceptor molecules. Using a photochromic π-switch as a donor and an electron deficient acceptor dye such stacks were formed. Photomodulation of the donor unit with visible light led to a photoisomerized state having a non-planar structure with reduced donor ability, thereby causing destruction of the alternate D-A π-stacks. The formation and destruction of the stacks were studied by various spectroscopy methods. Both the stacks and the depleted stacks were studied by DLS and SEM experiments. The regeneration of the stacks occurred in solution with the reversal of the photoisomerization process with ultraviolet light. Computational and differential scanning calorimetric studies validated the thermodynamics of the formation of the stacks. This work presents a reversible assembly-disassembly of a donor-acceptor π system devoid of additional auxiliary non-covalent bonding motifs in the donor and acceptor molecules. PMID:26899505

  14. Id-1 promotes TGF-{beta}1-induced cell motility through HSP27 activation and disassembly of adherens junction in prostate epithelial cells

    SciTech Connect

    Di Kaijun; Wong, Y.C. Wang Xianghong

    2007-11-15

    Id-1 (inhibitor of differentiation or DNA binding-1) has been positively associated with cell proliferation, cell cycle progression, and invasiveness during tumorigenesis. In addition, Id-1 has been shown to modulate cellular sensitivity to TGF-{beta}1 (transforming growth factor {beta}1). Here we demonstrate a novel role of Id-1 in promoting TGF-{beta}1-induced cell motility in a non-malignant prostate epithelial cell line, NPTX. We found that Id-1 promoted F-actin stress fiber formation in response to TGF-{beta}1, which was associated with increased cell-substrate adhesion and cell migration in NPTX cells. In addition, this positive effect of Id-1 on TGF-{beta}1-induced cell motility was mediated through activation of MEK-ERK signaling pathway and subsequent phosphorylation of HSP27 (heat shock protein 27). Furthermore, Id-1 disrupted the adherens junction complex in TGF-{beta}1-treated cells through down-regulation of E-cadherin, redistribution of {beta}-catenin, along with up-regulation of N-cadherin. These lines of evidence reveal a novel tumorigenic role of Id-1 through reorganization of actin cytoskeleton and disassembly of cell-cell adhesion in response to TGF-{beta}1 in human prostate epithelial cells, and suggest that intracellular Id-1 levels might be a determining factor for switching TGF-{beta}1 from a growth inhibitor to a tumor promoter during prostate carcinogenesis.

  15. Estancia Basin dynamic water budget.

    SciTech Connect

    Thomas, Richard P.

    2004-09-01

    The Estancia Basin lies about 30 miles to the east of Albuquerque, NM. It is a closed basin in terms of surface water and is somewhat isolated in terms of groundwater. Historically, the primary natural outlet for both surface water and groundwater has been evaporation from the salt lakes in the southeastern portion of the basin. There are no significant watercourses that flow into this basin and groundwater recharge is minimal. During the 20th Century, agriculture grew to become the major user of groundwater in the basin. Significant declines in groundwater levels have accompanied this agricultural use. Domestic and municipal use of the basin groundwater is increasing as Albuquerque population continues to spill eastward into the basin, but this use is projected to be less than 1% of agricultural use well into the 21st Century. This Water Budget model keeps track of the water balance within the basin. The model considers the amount of water entering the basin and leaving the basin. Since there is no significant surface water component within this basin, the balance of water in the groundwater aquifer constitutes the primary component of this balance. Inflow is based on assumptions for recharge made by earlier researchers. Outflow from the basin is the summation of the depletion from all basin water uses. The model user can control future water use within the basin via slider bars that set values for population growth, water system per-capita use, agricultural acreage, and the types of agricultural diversion. The user can also adjust recharge and natural discharge within the limits of uncertainty for those parameters. The model runs for 100 years beginning in 1940 and ending in 2040. During the first 55 years model results can be compared to historical data and estimates of groundwater use. The last 45 years are predictive. The model was calibrated to match to New Mexico Office of State Engineer (NMOSE) estimates of aquifer storage during the historical period by

  16. Stratigraphic modeling of sedimentary basins

    SciTech Connect

    Aigner, T. ); Lawrence, D.T. )

    1990-11-01

    A two-dimensional stratigraphic forward model has been successfully applied and calibrated in clastic, carbonate, and mixed clastic/carbonate regimes. Primary input parameters are subsidence, sea level, volume of clastics, and carbonate growth potential. Program output includes sequence geometries, facies distribution lithology distribution, chronostratigraphic plots, burial history plots, thermal and maturity histories, and crossplots. The program may be used to predict reservoir distribution, to constrain interpretations of well and seismic data, to rapidly test exploration scenarios in frontier basins, and to evaluate the fundamental controls on observed basin stratigraphy. Applications to data sets from Main Pass (US Gulf Coast), Offshore Sarawak (Malaysia), Rub'al Khali basin (Oman), Paris basin (France), and Baltimore Canyon (US East Coast) demonstrate that the program can be used to simulate stratigraphy on a basin-wide scale as well as on the scale of individual prospects.

  17. FROM CONCEPT TO REALITY, IN-SITU DECOMMISSIONING OF THE P AND R REACTORS AT THE SAVANNAH RIVER SITE

    SciTech Connect

    Musall, J.; Blankenship, J.; Griffin, W.

    2012-01-09

    SRS recently completed an approximately three year effort to decommission two SRS reactors: P-Reactor (Building 105-P) and R-Reactor (Building 105-R). Completed in December 2011, the concurrent decommissionings marked the completion of two relatively complex and difficult facility disposition projects at the SRS. Buildings 105-P and 105-R began operating as production reactors in the early 1950s with the mission of producing weapons material (e.g., tritium and plutonium-239). The 'P' Reactor and was shutdown in 1991 while the 'R' Reactor and was shutdown in 1964. In the intervening period between shutdown and deactivation & decommissioning (D&D), Buildings 105-P and 105-R saw limited use (e.g., storage of excess heavy water and depleted uranium oxide). For Building 105-P, deactivation was initiated in April 2007 and was essentially complete by June 2010. For Building 105-R, deactivation was initiated in August 2008 and was essentially complete by September 2010. For both buildings, the primary objective of deactivation was to remove/mitigate hazards associated with the remaining hazardous materials, and thus prepare the buildings for in-situ decommissioning. Deactivation removed the following hazardous materials to the extent practical: combustibles/flammables, residual heavy water, acids, friable asbestos (as needed to protect workers performing deactivation and decommissioning), miscellaneous chemicals, lead/brass components, Freon(reg sign), oils, mercury/PCB containing components, mold and some radiologically-contaminated equipment. In addition to the removal of hazardous materials, deactivation included the removal of hazardous energy, exterior metallic components (representing an immediate fall hazard), and historical artifacts along with the evaporation of water from the two Disassembly Basins. Finally, so as to facilitate occupancy during the subsequent in-situ decommissioning, deactivation implemented repairs to the buildings and provided temporary power.

  18. The deep Ionian Basin revisited

    NASA Astrophysics Data System (ADS)

    Tugend, Julie; Chamot-Rooke, Nicolas; Arsenikos, Stavros; Frizon de Lamotte, Dominique; Blanpied, Christian

    2016-04-01

    The deep Eastern Mediterranean Basins (Ionian and Herodotus) are characterized by thick sedimentary sequences overlying an extremely thinned basement evidenced from different geophysical methods. Yet, the nature of the crust (continental or oceanic) and the timing of the extreme crustal and lithosphere thinning in the different sub-basins remain highly controversial, casting doubts on the tectonic setting related to the formation of this segment of the North Gondwana paleo-margin. We focus on the Ionian Basin located at the western termination of the Eastern Mediterranean with the aim of identifying, characterizing and mapping the deepest sedimentary sequences. We present tentative age correlations relying on calibrations and observations from the surrounding margins and basins (Malta shelf and Escarpment, Cyrenaica margin, Sirte Basin, Apulian Platform). Two-ship deep refraction seismic data (Expanding Spread Profiles from the PASIPHAE cruise) combined with reprocessed reflection data (from the ARCHIMEDE survey) enabled us to present a homogeneous seismic stratigraphy across the basin and to investigate the velocity structure of its basement. Based on our results, and on a review of geological and geophysical observations, we suggest an Upper Triassic-Early Dogger age for the formation of the deep Ionian Basin. The nature of the underlying basement remains uncertain, both highly-thinned continental and slow-spreading type oceanic crust being compatible with the available constraints. The narrow size and relatively short-lived evolution of the Ionian Basin lead us to suggest that it is more likely the remnant of an immature oceanic basin than of a stable oceanic domain. Eventually, upscaling these results at the scale of the Eastern Mediterranean Basins highlights the complex interaction observed between two propagating oceans: The Central Atlantic and Neo-Tethys.

  19. RESERVES IN WESTERN BASINS PART IV: WIND RIVER BASIN

    SciTech Connect

    Robert Caldwell

    1998-04-01

    Vast quantities of natural gas are entrapped within various tight formations in the Rocky Mountain area. This report seeks to quantify what proportion of that resource can be considered recoverable under today's technological and economic conditions and discusses factors controlling recovery. The ultimate goal of this project is to encourage development of tight gas reserves by industry through reducing the technical and economic risks of locating, drilling and completing commercial tight gas wells. This report is the fourth in a series and focuses on the Wind River Basin located in west central Wyoming. The first three reports presented analyses of the tight gas reserves and resources in the Greater Green River Basin (Scotia, 1993), Piceance Basin (Scotia, 1995) and the Uinta Basin (Scotia, 1995). Since each report is a stand-alone document, duplication of language will exist where common aspects are discussed. This study, and the previous three, describe basin-centered gas deposits (Masters, 1979) which contain vast quantities of natural gas entrapped in low permeability (tight), overpressured sandstones occupying a central basin location. Such deposits are generally continuous and are not conventionally trapped by a structural or stratigraphic seal. Rather, the tight character of the reservoirs prevents rapid migration of the gas, and where rates of gas generation exceed rates of escape, an overpressured basin-centered gas deposit results (Spencer, 1987). Since the temperature is a primary controlling factor for the onset and rate of gas generation, these deposits exist in the deeper, central parts of a basin where temperatures generally exceed 200 F and drill depths exceed 8,000 feet. The abbreviation OPT (overpressured tight) is used when referring to sandstone reservoirs that comprise the basin-centered gas deposit. Because the gas resources trapped in this setting are so large, they represent an important source of future gas supply, prompting studies to

  20. Aleutian basin oceanic crust

    USGS Publications Warehouse

    Christeson, Gail L.; Barth, Ginger A.

    2015-01-01

    We present two-dimensional P-wave velocity structure along two wide-angle ocean bottom seismometer profiles from the Aleutian basin in the Bering Sea. The basement here is commonly considered to be trapped oceanic crust, yet there is a change in orientation of magnetic lineations and gravity features within the basin that might reflect later processes. Line 1 extends ∼225 km from southwest to northeast, while Line 2 extends ∼225 km from northwest to southeast and crosses the observed change in magnetic lineation orientation. Velocities of the sediment layer increase from 2.0 km/s at the seafloor to 3.0–3.4 km/s just above basement, crustal velocities increase from 5.1–5.6 km/s at the top of basement to 7.0–7.1 km/s at the base of the crust, and upper mantle velocities are 8.1–8.2 km/s. Average sediment thickness is 3.8–3.9 km for both profiles. Crustal thickness varies from 6.2 to 9.6 km, with average thickness of 7.2 km on Line 1 and 8.8 km on Line 2. There is no clear change in crustal structure associated with a change in orientation of magnetic lineations and gravity features. The velocity structure is consistent with that of normal or thickened oceanic crust. The observed increase in crustal thickness from west to east is interpreted as reflecting an increase in melt supply during crustal formation.

  1. K-Basins design guidelines

    SciTech Connect

    Roe, N.R.; Mills, W.C.

    1995-06-01

    The purpose of the design guidelines is to enable SNF and K Basin personnel to complete fuel and sludge removal, and basin water mitigation by providing engineering guidance for equipment design for the fuel basin, facility modifications (upgrades), remote tools, and new processes. It is not intended to be a purchase order reference for vendors. The document identifies materials, methods, and components that work at K Basins; it also Provides design input and a technical review process to facilitate project interfaces with operations in K Basins. This document is intended to compliment other engineering documentation used at K Basins and throughout the Spent Nuclear Fuel Project. Significant provisions, which are incorporated, include portions of the following: General Design Criteria (DOE 1989), Standard Engineering Practices (WHC-CM-6-1), Engineering Practices Guidelines (WHC 1994b), Hanford Plant Standards (DOE-RL 1989), Safety Analysis Manual (WHC-CM-4-46), and Radiological Design Guide (WHC 1994f). Documents (requirements) essential to the engineering design projects at K Basins are referenced in the guidelines.

  2. Basin development and petroleum potential of offshore Otway basin, Australia

    SciTech Connect

    Williamson, P.E.; O'Brien, G.W.; Swift, M.G.; Scherl, A.S.; Marlow, M.S.; Exon, N.F.; Falvey, D.A.; Lock, J.; Lockwood, K.

    1987-05-01

    The Bass Strait region in southeastern Australia contains three sedimentary basins, which are, from east to west, the Gippsland, Bass, and Otway basins. The offshore Gippsland basin is Australia's most prolific petroleum-producing province and supplies over 90% of the country's production. In contrast, exploration has been unsuccessful in the offshore portion of the Otway basin; 17 wells have been drilled, and although shows of oil and gas have been common, no commercial discoveries have been made. Many of these wells, drilled in the 1960s and 1970s, were sited using poor-quality seismic data and, as a consequence, were frequently off structure. Seismic data quality has, however, improved significantly in recent years. The present study by the Australian Bureau of Mineral Resources (BMR) involved the collection, in the offshore Otway basin, of 3700 km of high-quality, 48-channel seismic reflection data by the BMR research vessel R/V Rig Seismic. These data have been integrated with existing industry seismic data, well data, limited dredged material, and geohistory analyses in a framework study of basin development and hydrocarbon potential in this under-explored area. The offshore Otway basin extends 500 km along the southern coastline and is typically 50 km wide in water depths of less than 200 m. It contains up to 10 km of predominantly late Mesozoic to early Cenozoic sediments, which are overlain by a thin sequence of middle to late Tertiary shelf carbonates. It has been divided into three main structural elements: the Mussel Platform in the east, the central Voluta Trough, and the Crayfish Platform in the west. The basin was initiated at the end of the Jurassic as part of the Bassian rift. Up to 6 km of Lower Cretaceous sediments were deposited prior to breakup at the end of the Early Cretaceous and the onset of sea-floor spreading between Australia and Antarctica.

  3. Martian lake basins and lacustrine plains

    NASA Astrophysics Data System (ADS)

    de Hon, R. A.

    1992-02-01

    A classification of Martian lake basins based on the location of the basin in respect to water sources is proposed. The classes are type 1: valley-head basins; type 2: intravalley basins; type 3: valley-terminal basins; and type 4: isolated basins. Martian lakes are ephemeral features. Many craters and irregular depressions impounded water only until the basins filled and overflowed. Water escaping by spillover rapidly cut crevasses in the downstream side of basins and drained the ponds. Clastic lacustrine sediments collected in the lakes as flowing water lost velocity and turbulence. Evaporitic deposits may be significant in those basins that were not rapidly drained. Sediments deposited in lake basins form smooth, featureless plains. Lacustrine plains are potentially candidate sites for Mars landings and for the search for evidence of ancient life.

  4. Streamlined Approach for Environmental Restoration (SAFER) Plan for Corrective Action Unit 117: Area 26 Pluto Disassembly Facility, Nevada Test Site, Nevada With Errata Sheets, Revision 0

    SciTech Connect

    Pat Matthews

    2007-09-01

    This Streamlined Approach for Environmental Restoration (SAFER) Plan addresses the actions needed to achieve closure for Corrective Action Unit (CAU) 117, Pluto Disassembly Facility, identified in the Federal Facility Agreement and Consent Order. Corrective Action Unit 117 consists of one Corrective Action Site (CAS), CAS 26-41-01, located in Area 26 of the Nevada Test Site. This plan provides the methodology for field activities needed to gather the necessary information for closing CAS 26-41-01. There is sufficient information and process knowledge from historical documentation and investigations of similar sites regarding the expected nature and extent of potential contaminants to recommend closure of CAU 117 using the SAFER process. Additional information will be obtained by conducting a field investigation before finalizing the appropriate corrective action for this CAS. The results of the field investigation will support a defensible recommendation that no further corrective action is necessary following SAFER activities. This will be presented in a Closure Report that will be prepared and submitted to the Nevada Division of Environmental Protection (NDEP) for review and approval. The site will be investigated to meet the data quality objectives (DQOs) developed on June 27, 2007, by representatives of NDEP; U.S. Department of Energy (DOE), National Nuclear Security Administration Nevada Site Office; Stoller-Navarro Joint Venture; and National Security Technologies, LLC. The DQO process was used to identify and define the type, amount, and quality of data needed to determine and implement appropriate corrective actions for CAS 26-41-01 in CAU 117.

  5. Oxidative stress disassembles the p38/NPM/PP2A complex, which leads to modulation of nucleophosmin-mediated signaling to DNA damage response.

    PubMed

    Guillonneau, Maëva; Paris, François; Dutoit, Soizic; Estephan, Hala; Bénéteau, Elise; Huot, Jacques; Corre, Isabelle

    2016-08-01

    Oxidative stress is a leading cause of endothelial dysfunction. The p38 MAPK pathway plays a determinant role in allowing cells to cope with oxidative stress and is tightly regulated by a balanced interaction between p38 protein and its interacting partners. By using a proteomic approach, we identified nucleophosmin (NPM) as a new partner of p38 in HUVECs. Coimmunoprecipitation and microscopic analyses confirmed the existence of a cytosolic nucleophosmin (NPM)/p38 interaction in basal condition. Oxidative stress, which was generated by exposure to 500 µM H2O2, induces a rapid dephosphorylation of NPM at T199 that depends on phosphatase PP2A, another partner of the NPM/p38 complex. Blocking PP2A activity leads to accumulation of NPM-pT199 and to an increased association of NPM with p38. Concomitantly to its dephosphorylation, oxidative stress promotes translocation of NPM to the nucleus to affect the DNA damage response. Dephosphorylated NPM impairs the signaling of oxidative stress-induced DNA damage via inhibition of the phosphorylation of ataxia-telangiectasia mutated and DNA-dependent protein kinase catalytic subunit. Overall, these results suggest that the p38/NPM/PP2A complex acts as a dynamic sensor, allowing endothelial cells to react rapidly to acute oxidative stress.-Guillonneau, M., Paris, F., Dutoit, S., Estephan, H., Bénéteau, E., Huot, J., Corre, I. Oxidative stress disassembles the p38/NPM/PP2A complex, which leads to modulation of nucleophosmin-mediated signaling to DNA damage response. PMID:27142525

  6. Sugar-mediated disassembly of mucin/lectin multilayers and their use as pH-Tolerant, on-demand sacrificial layers.

    PubMed

    Polak, Roberta; Crouzier, Thomas; Lim, Rosanna M; Ribbeck, Katharina; Beppu, Marisa M; Pitombo, Ronaldo N M; Cohen, Robert E; Rubner, Michael F

    2014-08-11

    The layer-by-layer (LbL) assembly of thin films on surfaces has proven to be an extremely useful technology for uses ranging from optics to biomedical applications. Releasing these films from the substrate to generate so-called free-standing multilayer films opens a new set of applications. Current approaches to generating such materials are limited because they can be cytotoxic, difficult to scale up, or have undesirable side reactions on the material. In this work, a new sacrificial thin film system capable of chemically triggered dissolution at physiological pH of 7.4 is described. The film was created through LbL assembly of bovine submaxillary mucin (BSM) and the lectin jacalin (JAC) for a (BSM/JAC) multilayer system, which remains stable over a wide pH range (pH 3-9) and at high ionic strength (up to 5 M NaCl). This stability allows for subsequent LbL assembly of additional films in a variety of conditions, which could be released from the substrate by incubation in the presence of a competitive inhibitor sugar, melibiose, which selectively disassembles the (BSM/JAC) section of the film. This novel multilayer system was then applied to generate free-standing, 7 μm diameter, circular ultrathin films, which can be attached to a cell surface as a "backpack". A critical thickness of about 100 nm for the (BSM/JAC) film was required to release the backpacks from the glass substrate, after incubation in melibiose solution at 37 °C for 1 h. Upon their release, backpacks were subsequently attached to murine monocytes without cytotoxicity, thereby demonstrating the compatibility of this mucin-based release system with living cells. PMID:24964165

  7. Tectonic framework of Turkish sedimentary basins

    SciTech Connect

    Yilmaz, P.O. )

    1988-08-01

    Turkey's exploration potential primarily exists in seven onshore (Southeast Turkey platform, Tauride platform, Pontide platform, East Anatolian platform, Interior, Trace, and Adana) basins and four offshore (Black Sea, Marmara Sea, Aegean Sea, and Mediterranean Sea) regional basins formed during the Mesozoic and Tertiary. The Mesozoic basins are the onshore basins: Southeast Turkey, Tauride, Pontide, East Anatolian, and Interior basins. Due to their common tectonic heritage, the southeast Turkey and Tauride basins have similar source rocks, structural growth, trap size, and structural styles. In the north, another Mesozoic basin, the Pontide platform, has a much more complex history and very little in common with the southerly basins. The Pontide has two distinct parts; the west has Paleozoic continental basement and the east is underlain by island-arc basement of Jurassic age. The plays are in the upper Mesozoic rocks in the west Pontide. The remaining Mesozoic basins of the onshore Interior and East Anatolian basins are poorly known and very complex. Their source, reservoir, and seal are not clearly defined. The basins formed during several orogenic phases in mesozoic and Tertiary. The Cenozoic basins are the onshore Thrace and Adana basins, and all offshore regional basins formed during Miocene extension. Further complicating the onshore basins evolution is the superposition of Cenozoic basins and Mesozoic basins. The Thrace basin in the northwest and Adana basin in the south both originate from Tertiary extension over Tethyan basement and result in a similar source, reservoir, and seal. Local strike-slip movement along the North Anatolian fault modifies the Thrace basin structures, influencing its hydrocarbon potential.

  8. Provenance and basin evolution, Zhada basin, southwestern Tibet

    NASA Astrophysics Data System (ADS)

    Saylor, J.; Decelles, P.; Gehrels, G.; Kapp, P.

    2007-12-01

    The Zhada basin is a late Miocene - Pliocene intermontane basin situated at high elevations in the Himalayan hinterland. The fluvial and lacustrine sediments of the Zhada formation are undeformed and sit in angular unconformity above the deformed Tethyan Sedimentary Sequence (TSS). The basin sits just south of the Indus suture in a structural position occupied elsewhere in the Himalayan orogen by some of the highest mountains on earth, including Everest. The occurrence of a basin at this location demands explanation. Currently, the Sutlej River flows parallel to the structural grain of the Himalaya, westward through the basin, towards the Leo Pargil (Qusum) range. Near the range front it takes a sharp southward turn, cuts across the structural grain of the Himalaya and out into the Gangetic foreland. Palaeocurrent indicators in the lower part of the Zhada formation show that the basin originated as a northwest flowing axial river. Palaeocurrent indicators are consistently northwest oriented, even to within to within 10 km of the Leo Pargil range front in the north-western end of the basin. This implies that at the onset of sedimentation in Zhada basin the Leo Pargil range was not a barrier as it is today. In the upper part of the Zhada formation, palaeocurrent indicators are generally directed towards the centre of the basin. In the central and southern portions of the basin this indicates a transition from an axial, northwest flowing river to prograding fluvial and alluvial fans. However, in the north-western part of the basin the change between lower and upper Zhada formation involves a complete drainage reversal. This change in palaeocurrent orientation is also reflected in the detrital zircon signal from basin sediments. Low in the Zhada formation the detrital zircon signal is dominated by zircons from the Kailash (Gangdese) batholith (or associated extrusives, see below). However, higher in the sections, a local source, either from the TSS or the core of the

  9. 77 FR 45653 - Yakima River Basin Conservation Advisory Group; Yakima River Basin Water Enhancement Project...

    Federal Register 2010, 2011, 2012, 2013, 2014

    2012-08-01

    ... Bureau of Reclamation Yakima River Basin Conservation Advisory Group; Yakima River Basin Water... on the structure, implementation, and oversight of the Yakima River Basin Water Conservation Program... of the Water Conservation Program, including the applicable water conservation guidelines of...

  10. Flexural analysis of two broken foreland basins; Late Cenozoic Bermejo basin and Early Cenozoic Green River basin

    SciTech Connect

    Flemings, P.B.; Jordan, T.E.; Reynolds, S.

    1986-05-01

    Lithospheric flexure that generates basin in a broke foreland setting (e.g., the Laramide foreland of Wyoming) is a three-dimensional system related to shortening along basin-bounding faults. The authors modeled the elastic flexure in three dimensions for two broken foreland basins: the early Cenozoic Green River basin and the analogous late Cenozoic Bermejo basin of Argentina. Each basin is located between a thrust belt and a reverse-fault-bounded basement uplift. Both basins are asymmetric toward the basement uplifts and have a central basement high: the Rock Springs uplift and the Pie de Palo uplift, respectively. The model applies loads generated by crustal thickening to an elastic lithosphere overlying a fluid mantle. Using the loading conditions of the Bermejo basin based on topography, limited drilling, and reflection and earthquake seismology, the model predicts the current Bermejo basin geometry. Similarly, flexure under the loading conditions in the Green River basin, which are constrained by stratigraphy, well logs, and seismic profiling and summed for Late Cretaceous (Lance Formation) through Eocene (Wasatch Formation), successfully models the observed geometry of the pre-Lance surface. Basin depocenters (> 4 km for the Green River basin; > 7 km for the Bermejo basin) and central uplifts are predicted to result from constructive interference of the nonparallel applied loads. Their Bermejo model implies that instantaneous basin geometry is successfully modeled by crustal loading, whereas the Green River basin analysis suggests that basin evolution can be modeled over large time steps (e.g., 20 Ma). This result links instantaneous basin geometry to overall basin evolution and is a first step in predicting stratigraphic development.

  11. Viscoelastic Relaxation of Lunar Basins

    NASA Astrophysics Data System (ADS)

    Mohit, P. S.; Phillips, R. J.

    2004-12-01

    The large lunar impact basins provide a unique glimpse into early lunar history. Here we investigate the possibility that the relief of the oldest lunar basins (with the exception of South-Pole Aitken) has decayed through viscous relaxation. We identify nine ancient multi-ring basins with very low relief and low-amplitude Bouguer and free-air gravity anomalies. The characteristics of these basins are consistent with either 1) relaxation of topographic relief by ductile flow (e.g. Solomon et al., 1982) or 2) obliteration of basin topography during crater collapse immediately following impact. Both scenarios require that the basins formed early in lunar history, when the Moon was hot. The latter possibility appears to be unlikely due to the great topographic relief of South Pole-Aitken basin (SPA), the largest and oldest impact basin on the Moon (with the possible exception of the putative Procellarum basin; Wilhelms, 1987). On the other hand, the thin crust beneath SPA may not have allowed ductile flow in its lower portions, even for a hot Moon, implying that a thicker crust is required beneath other ancient basins for the hypothesis of viscous relaxation to be tenable. Using a semi-analytic, self-gravitating viscoelastic model, we investigate the conditions necessary to produce viscous relaxation of lunar basins. We model topographic relaxation for a crustal thickness of 30 km, using a dry diabase flow law for the crust and dry olivine for the mantle. We find that the minimum temperature at the base of the crust (Tb) permitting nearly complete relaxation of topography by ductile flow on a timescale < 108 yrs is 1400 K, corresponding to a heat flow of 55mW/m2, into the crust. Ductile flow in the lower crust becomes increasingly difficult as the crustal thickness decreases. The crust beneath SPA, thinned by the impact, is only 15-20 km thick and would require Tb ≥ 1550 K for relaxation to occur. The fact that SPA has maintained high-amplitude relief suggests that

  12. Paleothermometry of the Sydney Basin

    SciTech Connect

    Middleton, M.F.; Schmidt, P.W.

    1982-07-10

    Evidence from overprinting of magnetizations of Late Permian and Mesozoic rocks and from the rank of Permian coals and Mesozoic phytoclasts (coal particles) suggests that surface rocks in the Sydney Basin, eastern Australia, have been raised to temperatures of the order of 200 /sup 0/C or higher. As vitrinite reflectance, an index of coal rank or coalification, is postulated to vary predictably with temperature and time, estimates of the paleotemperatures in the Sydney Basin based on observed vitrinite reflectance measurements can be made in conjunction with reasonable assumptions about the tectonic and thermal histories of the basin. These estimates give maximum paleotemperatures of present day surface rocks in the range 60--249 /sup 0/C, depending on factors such as location in the basin, the thickness of the sediment eroded, and the maximum paleogeothermal gradient. Higher coal rank and, consequently, larger eroded thicknesses and paleogeothermal gradients occur along the eastern edge of the basin and may be related to seafloor spreading in the Tasman Sea on the basin's eastern margin. A theory of thermal activation of magnetization entailing the dependence of magnetic viscosity on the size distribution of the magnetic grains is used to obtain an independent estimate of the maximum paleotemperatures in the Sydney Basin. This estimate places the maximum paleotemperature in the range 250--300 /sup 0/C along the coastal region. Both coalification and thermal activation of magnetization models provide strong evidence of elevated paleotemperatures, which in places exceed 200 /sup 0/C, and the loss of sediment thicknesses in excess of 1 km due to erosion.

  13. Basin Overflow Floods on Mars

    NASA Astrophysics Data System (ADS)

    Irwin, R. P.

    2006-12-01

    On Earth, the most intense recognized historical and paleofloods have been ice dambursts or overflows of large basins, often initiated by abundant runoff or meltwater from the contributing watersheds. Many impact craters and other basins also overflowed in the Martian cratered highlands, and some of their incised outlet valleys similarly record evidence of erosive floods. Otherwise, the commonly small, enclosed watersheds on Mars contain poorly developed valley networks and relatively simple depositional landforms, which record little evidence of intense (by terrestrial standards) meteorological floods. For these reasons, basin overflows may have been disproportionately important mechanisms for incision of large valleys on Mars. Many of the Martian outflow channels head in topographic settings that favored ponding, including large canyons, impact or intercrater basins, chaotic terrain basins, and grabens. This topography may have accumulated somewhat slower groundwater discharges from the subsurface to support peak channel discharges of 106-108 m3/s. To yield a discharge of 106, 107, and 108 m3/s from a dam failure with a width/depth ratio of 5, the model predicts that a breach of ~100, 250, and 640 m, respectively, must form rapidly with respect to the decline of lake level. Terrestrial damburst floods have not exceeded ~106 m3/s for earthen dams and ~107 m3/s for ice dams, but brecciation of the Martian surface by impact cratering may have allowed larger damburst failures, whereas solid bedrock was exposed at shallower depths in the terrestrial examples. Moreover, many of the Martian basins were much larger than enclosed continental basins on Earth, so long-lived overflows may have facilitated entrenchment of deeper channels. Some large, mid-latitude basins overflowed to carve Ma'adim Vallis and the Uzboi-Ladon-Margaritifer Valles system, which are similar in scale to the terrestrial Grand Canyon but record much larger formative discharges. Models of damburst

  14. Hydrogeologic framework of sedimentary deposits in six structural basins, Yakima River basin, Washington

    USGS Publications Warehouse

    Jones, M.A.; Vaccaro, J.J.; Watkins, A.M.

    2006-01-01

    The hydrogeologic framework was delineated for the ground-water flow system of the sedimentary deposits in six structural basins in the Yakima River Basin, Washington. The six basins delineated, from north to south are: Roslyn, Kittitas, Selah, Yakima, Toppenish, and Benton. Extent and thicknesses of the hydrogeologic units and total basin sediment thickness were mapped for each basin. Interpretations were based on information from about 4,700 well records using geochemical, geophysical, geologist's or driller's logs, and from the surficial geology and previously constructed maps and well interpretations. The sedimentary deposits were thickest in the Kittitas Basin reaching a depth of greater than 2,000 ft, followed by successively thinner sedimentary deposits in the Selah basin with about 1,900 ft, Yakima Basin with about 1,800 ft, Toppenish Basin with about 1,200 ft, Benton basin with about 870 ft and Roslyn Basin with about 700 ft.

  15. CALUTRON ASSEMBLING AND DISASSEMBLING APPARATUS

    DOEpatents

    Andrews, R.E.

    1959-01-27

    A closure plate assembly is presented for a calutron tank. Due to the size and weight of the calutron tank a special face plate, hinges and latch construction are required. The salient feature of the invention is the provision of a face plate carrying the ion separating niechanism and adapted to close an open side of a calutron tank. A spring-type hinge secured to the face plate at one end prevents injury to the sealing gasket as the face plate is inserted and withdrawn. In additions a hinged support for the face plate comprises readily separable hinge elements, so that the face plate may first be swung outwardly from its operative position far enough to clear the ion separating meehanism carried thereby, and may thereafter be elevated and transported by a convcntional overhead crane.

  16. CALUTRON ASSEMBLING AND DISASSEMBLING APPARATUS

    DOEpatents

    Andrews, R.E.

    1959-01-27

    The construction of a calutron tank is described, whcre the face plate of the tank carrying the ion separating mechanism may be inserted or withdrawn with a minimum of difficulty, even though the plate has considerable mass and the center of gravity of the plate assembly lies within the tank. In general, the plate is pivoted at its lower end by a specially designed hinge, whereby the weight of ths plate rests on the hinge when the plato is inserted in the tank opening. A pistoncylinder arrangement is mounted on the tank and attached at the top of the plate to produce sufficient force to pivot the plate out to a point where it withdraws by its own weight and to retard the natural tendency of the plate to close with heavy impact due to the unbalanced center of gravity of the plate assembly.

  17. Stormwater detention basin sediment removal

    SciTech Connect

    Gross, W.E.

    1995-12-31

    In the past, stormwater runoff from landfills has been treated mainly by focusing on reducing the peak storm discharge rates so as not to hydraulically impact downstream subsheds. However, with the advent of stricter water quality regulations based on the Federal Clean Water Act, and the related NPDES and SPDES programs, landfill owners and operators are now legally responsible for the water quality of the runoff once it leaves the landfill site. At the Fresh Kills Landfill in New York City, the world`s largest covering over 2000 acres, landfilling activities have been underway since 1945. With the main objective at all older landfill sites having focused on maximizing the available landfill footprint in order to obtain the most possible airspace volume, consideration was not given for the future siting of stormwater basin structures. Therefore, when SCS Engineers began developing the first comprehensive stormwater management plan for the site, the primary task was to locate potential sites for all the stormwater basins in order to comply with state regulations for peak stormwater runoff control. The basins were mostly constructed where space allowed, and were sized to be as large as possible given siting and subshed area constraints. Seventeen stormwater basins have now been designed and are being constructed to control the peak stormwater runoff for the 25-year, 24-hour storm as required by New York State. As an additional factor of safety, the basins were also designed for controlled discharge of the 100-year, 24 hour storm.

  18. Water Accounting from Ungauged Basins

    NASA Astrophysics Data System (ADS)

    Bastiaanssen, W. G.; Savenije, H.

    2014-12-01

    Water scarcity is increasing globally. This requires a more accurate management of the water resources at river basin scale and understanding of withdrawals and return flows; both naturally and man-induced. Many basins and their tributaries are, however, ungauged or poorly gauged. This hampers sound planning and monitoring processes. While certain countries have developed clear guidelines and policies on data observatories and data sharing, other countries and their basin organization still have to start on developing data democracies. Water accounting quantifies flows, fluxes, stocks and consumptive use pertaining to every land use class in a river basin. The objective is to derive a knowledge base with certain minimum information that facilitates decision making. Water Accounting Plus (WA+) is a new method for water resources assessment reporting (www.wateraccounting.org). While the PUB framework has yielded several deterministic models for flow prediction, WA+ utilizes remote sensing data of rainfall, evaporation (including soil, water, vegetation and interception evaporation), soil moisture, water levels, land use and biomass production. Examples will be demonstrated that show how remote sensing and hydrological models can be smartly integrated for generating all the required input data into WA+. A standard water accounting system for all basins in the world - with a special emphasis on data scarce regions - is under development. First results of using remote sensing measurements and hydrological modeling as an alternative to expensive field data sets, will be presented and discussed.

  19. Inversion of Extensional Sedimentary Basins

    NASA Astrophysics Data System (ADS)

    Buiter, Susanne J. H.; Pfiffner, O. Adrian

    The evolution of extensional sedimentary basins is governed by the surrounding stress field and can, therefore, be expected to be highly sensitive to variations in these stresses. Important changes in basin geometry are to be expected in the case of an even short-lived reversal from extension to compression. We investigate the evolu- tion of fold and thrust structures which form in compression after extension, when basin forming processes have come to a complete stop. To this purpose, we use a two- dimensional, viscoplastic model and start our experiments from a pre-existing exten- sional geometry. We illustrate the sensitivity of the evolving structures to inherited extensional geometry, sedimentary and erosional processes, and material properties. One series of our model experiments involves the upper- to middle crust only in order to achieve a high detail in the basin area. We find that our results agree with examples from nature and analogue studies in, among others, the uplift and rotation of syn-rift sediments, the propagation of shear zones into the post-rift sediments and, in specific cases, the development of back-thrusts or basement short-cut faults. We test the out- come of these models by performing a second series of model simulations in which basins on a continental margin are inverted through their progressive approach of a subduction zone. These latter models are on the scale of the whole upper mantle.

  20. Testing for Basins of Wada

    PubMed Central

    Daza, Alvar; Wagemakers, Alexandre; Sanjuán, Miguel A. F.; Yorke, James A.

    2015-01-01

    Nonlinear systems often give rise to fractal boundaries in phase space, hindering predictability. When a single boundary separates three or more different basins of attraction, we say that the set of basins has theWada property and initial conditions near that boundary are even more unpredictable. Many physical systems of interest with this topological property appear in the literature. However, so far the only approach to study Wada basins has been restricted to two-dimensional phase spaces. Here we report a simple algorithm whose purpose is to look for the Wada property in a given dynamical system. Another benefit of this procedure is the possibility to classify and study intermediate situations known as partially Wada boundaries. PMID:26553444

  1. Oil in the Malvinas Basin

    SciTech Connect

    Galeazzi, J.S.

    1996-08-01

    The Malvinas Basin is petroliferous. The main source rocks are Late Jurassic and Early Cretaceous outer shelf to basinal shales known as the Pampa Rincon and Lower Inoceramus formations. Main reservoirs are fluvial and shallow-marine sandstones of the coeval Springhill Formation. On the western flank of the basin, 17 wells drilled the Cenozoic and Mesozoic column. Three of these wells discovered hydrocarbons within the Springhill Formation, and one discovered oil in Early Paleogene sandstones. Additionally, some wells recorded shows at different levels within the stratigraphic succession. A detailed overview of the drilled portion of the basin permitted the construction of a sequence stratigraphic framework, and yielded clues on a complex history of deformation. Interpretation of facies and stratal stacking and termination patterns determined that the main reservoir and source rocks were deposited in a ramp-style depositional setting. They represent the lower transgressive phase of a Late Jurassic to Early Cretaceous megasequence deposited during the early sag stage of the basin. Alternative reservoirs to the Springhill sandstones include early Paleogene glauconitic sandstones and carbonates, and Miocene deep-water turbidites. Structural trap styles include normal fault features of Jurassic to Early Cretaceous age, and compressional and inverted positive structures due to Neogene compression. Possible combination and stratigraphic traps include: little tested onlap pinchout of Late Jurassic to Early Cretaceous and Paleogene sandstones and untested erosionally truncated Paleogene sandstones; Early Paleogene carbonate buildups and Miocene deep-water turbidite mounds. The understanding of the geology of the western Malvinas Basin is the key to success of exploration in the huge frontier surrounding areas.

  2. H-Area Seepage Basins

    SciTech Connect

    Stejskal, G.

    1990-12-01

    During the third quarter of 1990 the wells which make up the H-Area Seepage Basins (H-HWMF) monitoring network were sampled. Laboratory analyses were performed to measure levels of hazardous constituents, indicator parameters, tritium, nonvolatile beta, and gross alpha. A Gas Chromatograph Mass Spectrometer (GCMS) scan was performed on all wells sampled to determine any hazardous organic constituents present in the groundwater. The primary contaminants observed at wells monitoring the H-Area Seepage Basins are tritium, nitrate, mercury, gross alpha, nonvolatile beta, trichloroethylene (TCE), tetrachloroethylene, lead, cadmium, arsenic, and total radium.

  3. Origin of the earth's ocean basins

    NASA Technical Reports Server (NTRS)

    Frey, H.

    1977-01-01

    The earth's original ocean basins are proposed to be mare-type basins produced 4 billion y.a. by the flux of asteroid-sized objects responsible for the lunar mare basins. Scaling upward from the observed number of lunar basins for the greater capture cross-section and impact velocity of the earth indicates that at least 50% of an original global crust would have been converted to basin topography. These basins were flooded by basaltic liquids in times short compared to the isostatic adjustment time for the basin. The modern crustal dichotomy (60% oceanic, 40% continental crust) was established early in the history of the earth, making possible the later onset of plate tectonic processes. These later processes have subsequently reworked, in several cycles, principally the oceanic parts of the earth's crust, changing the configuration of the continents in the process. Ocean basins (and oceans themselves) may be rare occurrences on planets in other star systems.

  4. Origin of the earth's ocean basins

    NASA Technical Reports Server (NTRS)

    Frex, H.

    1977-01-01

    The earth's original ocean basins were mare-type basins produced 4 billion years ago by the flux of asteroid-sized objects responsible for the lunar mare basins. Scaling upwards from the observed number of lunar basins for the greater capture cross-section and impact velocity of the Earth indicates that at least 50 percent of an original global crust would have been converted to basin topography. These basins were flooded by basaltic liquids in times short compared to the isostatic adjustment time for the basin. The modern crustal dichotomy (60 percent oceanic, 40 percent continental crust) was established early in the history of the earth, making possible the later onset of plate tectonic processes. These later processes have subsequently reworked, in several cycles, principally the oceanic parts of the earth's crust, changing the configuration of the continents in the process. Ocean basins (and oceans themselves) may be rare occurrences on planets in other star systems.

  5. Searching for Nectaris Basin Impact Melt Rocks

    NASA Astrophysics Data System (ADS)

    Cohen, B. A.

    2015-07-01

    Because Nectaris Basin is a key stratigraphic marker for lunar bombardment, we are conducting an effort to identify Nectaris basin impact-melt rocks, to model their emplacement, and to examine sites where Nectaris impact melt is abundant.

  6. Caribbean basin framework, 4: Maracaibo basin, northwestern Venezuela

    SciTech Connect

    Lugo, J. )

    1991-03-01

    The Maracaibo basin is presently located in a topographic depression on the Maracaibo block, a triangular, fault-bounded block within the Caribbean-South America plate boundary of northwestern Venezuela. Intense oil exploration over the last 50 years has produced a large amount of seismic and well data that can be used to constrain four Jurassic to Recent tectonic and depositional events that affected the region: (1). Late Jurassic rift phase and subsidence along normal faults striking north-northeast across the floor of the basin; (2) Cretaceous to early Eocene subsidence recorded by shallow to deep marine carbonate and clastic rocks that thicken from south to north and completely cover Permian rocks of the Merida arch; (3) Eocene folding, thrusting, and initial reactivation of Jurassic normal faults as convergent strike-slip and reverse faults. Eocene clastic sediments are thickest in a narrow northwest-trending foredeep on the northeastern margin of the basin; (4) Late Miocene to Recent northwest-southeast convergence is marked by continued reactivation of Jurassic normal faults as reverse and left-lateral strike-slip faults, uplift of mountain ranges bordering the basin, and deposition of up to 10 km of clastic sediment.

  7. 33 CFR 401.48 - Turning basins.

    Code of Federal Regulations, 2010 CFR

    2010-07-01

    ... 33 Navigation and Navigable Waters 3 2010-07-01 2010-07-01 false Turning basins. 401.48 Section... TRANSPORTATION SEAWAY REGULATIONS AND RULES Regulations Seaway Navigation § 401.48 Turning basins. No vessel... the locations set out in the table to this section. Table 1. South Shore Canal: (a) Turning Basin...

  8. 33 CFR 401.48 - Turning basins.

    Code of Federal Regulations, 2011 CFR

    2011-07-01

    ... 33 Navigation and Navigable Waters 3 2011-07-01 2011-07-01 false Turning basins. 401.48 Section... TRANSPORTATION SEAWAY REGULATIONS AND RULES Regulations Seaway Navigation § 401.48 Turning basins. No vessel... the locations set out in the table to this section. Table 1. South Shore Canal: (a) Turning Basin...

  9. Supplementary information on K-Basin sludges

    SciTech Connect

    MAKENAS, B.J.

    1999-03-15

    Three previous documents in this series have been published covering the analysis of: K East Basin Floor and Pit Sludge, K East Basin Canister Sludge, and K West Basin Canister Sludge. Since their publication, additional data have been acquired and analyses performed. It is the purpose of this volume to summarize the additional insights gained in the interim time period.

  10. Evolution of the Congo Basin

    NASA Astrophysics Data System (ADS)

    Glasmacher, U. A.; Bauer, F. U.; Kollenz, S.; Delvaux, D.

    2012-04-01

    The Congo Basin is one of the largest basins in the World with very little knowledge on the geological evolution as well as the oil and gas potential. In the past, oil seeps are recorded in the central part of the basin. Four sides in the Congo basin have been drilled so far. The cores of the two drill sides Dekese and Samba are located at the Musée royal de l'Afrique Centrale, Belgium. In a reconnaissance survey, we sampled both drill cores in a nearly even spacing of ~ 150 m covering the whole stratigraphy from Albian to Proterozoic. The red and green to grey sandstone samples were prepared by usual heavy minerals separation technique. Most of the samples revealed enough apatite and zircon grains for the two thermochronometric techniques fission track and (U-Th-Sm)/He. The time-temperature (t-T) evolution for the two drill locations were modelled by using the determined thermochronological data within the software code HeFTy. We tested various geological evolutionary constrains. Both techniques provide us information on the thermal and exhumation of the possible source area and on the drill location by themselves.

  11. Tectonic evolution and oil and gas of Tarim basin

    NASA Astrophysics Data System (ADS)

    Yuzhu, Kang; Zhihong, Kang

    According to the new results achieved in the past ten years and more, using mobilism and the theory of polycycle by Huang Jiqing (1977, 1984), the formation of the basement of the Tarim basin and its characteristics are summarized. The prototype basins formed since Sinian times are classified into rift basin, continental marginal basin, cratonic basin, foreland basin and others. The Tarim basin is regarded as a huge oil- and gas-bearing basin superposed by prototype basins of different ages. The tectonic characteristics of these basins including tectonic movements, tectonic migrations, faults and trap types are summarized. In addition, structural control over oil and gas and oil-forming features are analysed.

  12. Mississippian facies relationships, eastern Anadarko basin, Oklahoma

    SciTech Connect

    Peace, H.W. ); Forgotson, J.M. )

    1991-08-01

    Mississippian strata in the eastern Anadarko basin record a gradual deepening of the basin. Late and post-Mississippian tectonism (Wichita and Arbuckle orogenies) fragmented the single large basin into the series of paired basins and uplifts recognized in the southern half of Oklahoma today. Lower Mississippian isopach and facies trends (Sycamore and Caney Formations) indicate that basinal strike in the study area (southeastern Anadarko basin) was predominantly east-west. Depositional environment interpretations made for Lower Mississippian strata suggest that the basin was partially sediment starved and exhibited a low shelf-to-basin gradient. Upper Mississippian isopach and facies trends suggest that basinal strike within the study area shifted from dominantly east-west to dominantly northwest-southeast due to Late Mississippian and Early Pennsylvanian uplift along the Nemaha ridge. Within the study area, the Chester Formation, composed of gray to dove-gray shales with interbedded limestones deposited on a carbonate shelf, thins depositionally into the basin and is thinnest at its facies boundary with the Springer Group and the upper portion of the Caney Formation. As basin subsidence rates accelerated, the southern edge of the Chester carbonate shelf was progressively drowned, causing a backstepping of the Chester Formation calcareous shale and carbonate facies. Springer Group sands and black shales transgressed northward over the drowned Chester Formation shelf.

  13. Geodynamics of the Sivas Basin (Turkey): from a forearc basin to a retroarc foreland basin

    NASA Astrophysics Data System (ADS)

    Legeay, Etienne; Ringenbach, Jean-Claude; Kergaravat, Charlie; Callot, Jean-Paul; Mohn, Geoffroy; Kavak, Kaan

    2016-04-01

    Anatolia records the consumption of several oceanic basins, from the Northern Neotethys domain, by north-dipping subduction until the end of Mesozoic. The associated obduction event occurred during Campanian, from North to South and from Greece to Oman, leading to the emplacement of ophiolite thrust sheets and associated ophiolitic mélange. In particular, the Sivas Basin in Eastern Anatolia is located at the boundary between the Kırsehir block to the East, Pontide arc to the North and Tauride Platform to the South, sutured by ophiolitic belts. The Sivas Basin formed a Tertiary fold-and-thrust belt, which exhibits mainly north verging thrust in Paleogene deposits, and South verging thrust in oligo-miocene sequence. To understand the northern verging thrust above south verging obduction, it is necessary to zoom out of the basin, and include a set of processes that affect the eastern Anatolia. This study aims to characterize the structural and sedimentary evolution of the Sivas Basin, based on a fieldwork approach, coupled to the interpretation of subsurface data, thermochronology and biostratigraphy. The Sivas Basin was initiated in a forearc setting relatively to the subduction of the Inner-Tauride Ocean while the associated ophiolites are obducted onto the northern passive margin of the Tauride margin. Early Maastrichtian to Paleocene deposits are represented by carbonate platforms located on ophiolitic highs, passing to turbidites and olistostomes toward the North. The early Eocene sediments, mainly composed of ophiolitic clasts, are deposited on a regional unconformity marked along the southern margin of the basin by incisions in response to the emergence of north-verging thrust. The middle Eocene sediments, intensively folded by northward thrusting, are mostly represented by flysch type deposits (olistostromes, mass-flows and turbidites). The onset of the compression is related to the initiation of the Taurus shortening in a retroarc situation, in response to

  14. Hydrocarbon accumulations in the Tarim basin, China

    SciTech Connect

    Li Desheng; Liang Digang; Jia Chengzao; Wang Gang

    1996-10-01

    The Tarim basin is the largest and least explored inland basin in China. The areal extent of the basin reaches 560,000 km{sup 2}. The interior of the basin is mostly covered by the Takla Mekan Desert, which is about 330,000 km{sup 2} in areal extent. The basin has become the object of special attention since China set aside first- and third-round onshore bidding blocks in the Tarim basin for foreign oil firms to explore. The Tarim basin is a polyhistory superimposed basin that has experienced seven evolutionary stages: (1) Sinian-Cambrian-Ordovician aulacogen stage, (2) Silurian-Devonian intracratonic depression stage, (3) Carboniferous marginal sea stage, (4) Permian rift basin stage, (5) Triassic-Jurassic foreland basin stage, (6) Cretaceous-Paleogene NeoTethys bay stage, and (7) Neogene-Pleistocene foreland and inland basin stage. Both the basin`s Paleozoic marine platform sequences and the Mesozoic-Cenozoic terrestrial fills are believed to contain substantial volumes of hydrocarbons. After recent years of exploration, nine oil and gas fields have been proven and 23 discoveries have been made in the Tabei, Tazhong, and Southwest areas. Kekeya, Lunnan, Sangtamu, Jiefangqudong, Donghetang, and Tazhong 4 oil fields have been put into production. Output of crude oil was 2.6 million t (metric tons) (52,000 BOPD) in 1995. The production will increase to 5 million t (100,000 BOPD) in 1997. Giant oil and gas traps probably will be discovered in the Tarim basin. The prospect is promising.

  15. Keuper stratigraphic cycles in the Paris basin and comparison with cycles in other peritethyan basins (German basin and Bresse-Jura basin)

    NASA Astrophysics Data System (ADS)

    Bourquin, Sylvie; Guillocheau, François

    1996-09-01

    High-resolution sequence stratigraphy of the Keuper, Paris Basin, is used to establish correlations between the basin-centre evaporite series and the basin-margin clastics series. The high-resolution correlations show stratigraphic cycle geometries. The Keuper consists of five minor base-level cycles whth occur in the upper portion of the Scythian-Carnian major base-level cycle and the lower part of the Carnian-Liassic major base-level cycle. The maximum relative rate of subsidence for the base-level fall phase of the Scythian-Carnian major cycle occurs in the eastern part of the Paris Basin. During the base-level rise phase of the Carnian-Liassic major cycle, the area of highest rate of subsidence shifted westwards and northwards. This shift records the first occurrence of an independent Paris Basin which was no longer merely the western margin of the German Basin. Two phases of tectonic movement influenced evaporite sedimentation and sequence geometries by creating areas of subsidence where halite could accumulate. The second, within the 'Marnes irisées supérieures', induced a general westward and northward tilt of the basin. Concurrent migration of depocentres to the west and north produced an intra-'Marnes irisées supérieures' truncation. Comparison of the stratigraphic records of the Paris Basin and of other Triassic Peritethyan basins (German Basin, Bresse-Jura Basin and South-East Basin) reveals numerous similarities. The coastal onlap curve of the German Keuper (Aigner and Bachmann, 1992) exhibits many similarities with the sequence evolution of the Paris Basin. But the Triassic succession is more complete in the German Basin and more cycles are observed. The major difference between these two basins during the Keuper is that the 'Marnes irisées inférieures' minor base-level cycle does not occur in the German Basin. In the Bresse-Jura Basin, the major difference concerns the Lettenkohle. One minor base-level cycle is recorded in the Paris Basin while

  16. THE ADVANCED CHEMISTRY BASINS PROJECT

    SciTech Connect

    William Goddard; Peter Meulbroek; Yongchun Tang; Lawrence Cathles III

    2004-04-05

    In the next decades, oil exploration by majors and independents will increasingly be in remote, inaccessible areas, or in areas where there has been extensive shallow exploration but deeper exploration potential may remain; areas where the collection of data is expensive, difficult, or even impossible, and where the most efficient use of existing data can drive the economics of the target. The ability to read hydrocarbon chemistry in terms of subsurface migration processes by relating it to the evolution of the basin and fluid migration is perhaps the single technological capability that could most improve our ability to explore effectively because it would allow us to use a vast store of existing or easily collected chemical data to determine the major migration pathways in a basin and to determine if there is deep exploration potential. To this end a the DOE funded a joint effort between California Institute of Technology, Cornell University, and GeoGroup Inc. to assemble a representative set of maturity and maturation kinetic models and develop an advanced basin model able to predict the chemistry of hydrocarbons in a basin from this input data. The four year project is now completed and has produced set of public domain maturity indicator and maturation kinetic data set, an oil chemistry and flash calculation tool operable under Excel, and a user friendly, graphically intuitive basin model that uses this data and flash tool, operates on a PC, and simulates hydrocarbon generation and migration and the chemical changes that can occur during migration (such as phase separation and gas washing). The DOE Advanced Chemistry Basin Model includes a number of new methods that represent advances over current technology. The model is built around the concept of handling arbitrarily detailed chemical composition of fluids in a robust finite-element 2-D grid. There are three themes on which the model focuses: chemical kinetic and equilibrium reaction parameters, chemical

  17. Formation of lunar basin rings

    USGS Publications Warehouse

    Hodges, C.A.; Wilhelms, D.E.

    1978-01-01

    The origin of the multiple concentric rings that characterize lunar impact basins, and the probable depth and diameter of the transient crater have been widely debated. As an alternative to prevailing "megaterrace" hypotheses, we propose that the outer scarps or mountain rings that delineate the topographic rims of basins-the Cordilleran at Orientale, the Apennine at Imbrium, and the Altai at Nectaris-define the transient cavities, enlarged relatively little by slumping, and thus are analogous to the rim crests of craters like Copernicus; inner rings are uplifted rims of craters nested within the transient cavity. The magnitude of slumping that occurs on all scarps is insufficient to produce major inner rings from the outer. These conclusions are based largely on the observed gradational sequence in lunar central uplifts:. from simple peaks through somewhat annular clusters of peaks, peak and ring combinations and double ring basins, culminating in multiring structures that may also include peaks. In contrast, belts of slump terraces are not gradational with inner rings. Terrestrial analogs suggest two possible mechanisms for producing rings. In some cases, peaks may expand into rings as material is ejected from their cores, as apparently occurred at Gosses Bluff, Australia. A second process, differential excavation of lithologically diverse layers, has produced nested experimental craters and is, we suspect, instrumental in the formation of terrestrial ringed impact craters. Peak expansion could produce double-ring structures in homogeneous materials, but differential excavation is probably required to produce multiring and peak-in-ring configurations in large lunar impact structures. Our interpretation of the representative lunar multiring basin Orientale is consistent with formation of three rings in three layers detected seismically in part of the Moon-the Cordillera (basin-bounding) ring in the upper crust, the composite Montes Rook ring in the underlying

  18. The Central European Permian Basins; Rheological and structural controls on basin history and on inter-basin connectivity

    NASA Astrophysics Data System (ADS)

    Smit, Jeroen; Van Wees, Jan-Diederik; Cloetingh, Sierd

    2014-05-01

    We analyse the relative importance of the major crustal-scale fault zones and crustal architecture in controlling basin formation, deformation and the structural connections between basins. The North and South Permian Basins of Central Europe are usually defined by the extend of Rotliegend sedimentary and volcanic units and not by a common tectonic origin or development. Instead, the sub-basins that together form the Permian Basins are each controlled by different structural and/or rheological controls that are inherited from Early Paleozoïc and older geodynamic processes, they are even located in different crustal/lithospheric domains. The North Permian basin is located on Baltic crust that was thinned during Late Proterozoïc - Early Paleozoïc times. South of the Thor suture, the South Permian basin and its sub-basins are located on Avalonian crust (Southern North Sea and North German Basins) and on the transition of East European cratonic and Avalonian crust (Polish Through). The size of crustal domains and of the faults that govern basin formation requires a regional-scale to assess their impact on basins and sub-basins. In the case of the Permian Basins this encompasses East Avalonia and surroundings, roughly speaking the area north of the Variscan Rheïc suture, east of the Atlantic and southwest of the Teisseyre-Tornquist line. This approach sheds light on the effects of long lived differences in crustal fabric which are responsible for spatial heterogeneity in stress and strain magnitudes and zonations of fracturing, burial history and temperature history. The focus on understanding the geomechanical control of large crustal-scale fault structures will provide the constraints and geometrical and compositional input for local models of stress and strain. Considering their fundamentally different structural and rheological controls, the Permian (sub)basins have a remarkably common history of subsidence and inversion, suggesting a more or less continuous

  19. CLEAR LAKE BASIN 2000 PROJECT

    SciTech Connect

    LAKE COUNTY SANITATION DISTRICT

    2003-03-31

    The following is a final report for the Clear Lake Basin 2000 project. All of the major project construction work was complete and this phase generally included final details and testing. Most of the work was electrical. Erosion control activities were underway to prepare for the rainy season. System testing including pump stations, electrical and computer control systems was conducted. Most of the project focus from November onward was completing punch list items.

  20. The sedimentary basins of Tanzania - reviewed

    NASA Astrophysics Data System (ADS)

    Mbede, E. I.

    The sedimentary basins of Tanzania have been classified into four morphotectonic groups: the coastal basin, the Karoo rift basins, basins found within the present East African rift valley and the cratonic sag basins. Except for the cratonic sag basins, each of these basin group has been affected by rifting at one time or another. The geology of each basin is discussed, structural evolution is evaluated and the prospectivity is thence looked into. Coal is exploited at Songwe-Kiwira coalfield and is found in potentially economic quantities in other Karoo basins. Prospecting for hydrocarbon resources has been going on since the 50s. Gas has been discovered in Songosongo and Mnazi bay fields, uneconomical quantities of oil have also been reported in Songosongo. Being basically rift basins which have reached different stages of development, source rocks normally associated with Initial-rifting, synrifting as well as post-rifting processes are probably well developed. Reservoir rocks, traps and cap rocks are normally not rare in such tectonic environments. Thermal gradients associated with the rifting stage are normaly high to effect maturation of source rocks even at low sedimentary thicknesses. Studies done so far are still inconclusive, because while testing has mainly been focused on structural traps stratigraphic traps seems to be more promising.

  1. Basin stability in delayed dynamics

    PubMed Central

    Leng, Siyang; Lin, Wei; Kurths, Jürgen

    2016-01-01

    Basin stability (BS) is a universal concept for complex systems studies, which focuses on the volume of the basin of attraction instead of the traditional linearization-based approach. It has a lot of applications in real-world systems especially in dynamical systems with a phenomenon of multi-stability, which is even more ubiquitous in delayed dynamics such as the firing neurons, the climatological processes, and the power grids. Due to the infinite dimensional property of the space for the initial values, how to properly define the basin’s volume for delayed dynamics remains a fundamental problem. We propose here a technique which projects the infinite dimensional initial state space to a finite-dimensional Euclidean space by expanding the initial function along with different orthogonal or nonorthogonal basis. A generalized concept of basin’s volume in delayed dynamics and a highly practicable calculating algorithm with a cross-validation procedure are provided to numerically estimate the basin of attraction in delayed dynamics. We show potential applicabilities of this approach by applying it to study several representative systems of biological or/and physical significance, including the delayed Hopfield neuronal model with multistability and delayed complex networks with synchronization dynamics. PMID:26907568

  2. Basin stability in delayed dynamics

    NASA Astrophysics Data System (ADS)

    Leng, Siyang; Lin, Wei; Kurths, Jürgen

    2016-02-01

    Basin stability (BS) is a universal concept for complex systems studies, which focuses on the volume of the basin of attraction instead of the traditional linearization-based approach. It has a lot of applications in real-world systems especially in dynamical systems with a phenomenon of multi-stability, which is even more ubiquitous in delayed dynamics such as the firing neurons, the climatological processes, and the power grids. Due to the infinite dimensional property of the space for the initial values, how to properly define the basin’s volume for delayed dynamics remains a fundamental problem. We propose here a technique which projects the infinite dimensional initial state space to a finite-dimensional Euclidean space by expanding the initial function along with different orthogonal or nonorthogonal basis. A generalized concept of basin’s volume in delayed dynamics and a highly practicable calculating algorithm with a cross-validation procedure are provided to numerically estimate the basin of attraction in delayed dynamics. We show potential applicabilities of this approach by applying it to study several representative systems of biological or/and physical significance, including the delayed Hopfield neuronal model with multistability and delayed complex networks with synchronization dynamics.

  3. Biogeochemistry of a Suburban Basin

    NASA Astrophysics Data System (ADS)

    McDowell, W. H.; Daley, M. L.; Blumberg, J.

    2002-12-01

    A long-term research effort was recently established in the Lamprey River basin in southeastern New Hampshire. The watershed is largely forested, and has significant amounts of wetlands due to the relatively low topographic relief. Human population growth is rapid, resulting in conversion of forest and agricultural land to housing tracts. The primary focus of the project will be to examine the relationships between land use, land cover and water quality as the watershed continues to increase in population density. A secondary emphasis will be to examine the interactions between hydrologic flow paths, climatic variability, and biogeochemical processes that drive groundwater and surface water quality in the basin. Our initial work has quantified landscape attributes and related them to water quality. Results to date show that small tributary streams are relatively high in nitrogen relative to the main stem of the Lamprey; that human population density drives nitrate concentrations in the basin; and that DOC flux is predicted well by the model of Aitkenhead and McDowell that links DOC flux to watershed C:N ratio.

  4. K West Basin canister survey

    SciTech Connect

    Pitner, A.L.

    1998-08-26

    A survey was conducted of the K West Basin to determine the distribution of canister types that contain the irradiated N Reactor fuel. An underwater camera was used to conduct the survey during June 1998, and the results were recorded on videotape. A full row-by-row survey of the entire basin was performed, with the distinction between aluminum and stainless steel Mark 1 canisters made by the presence or absence of steel rings on the canister trunions (aluminum canisters have the steel rings). The results of the survey are presented in tables and figures. Grid maps of the three bays show the canister lid ID number and the canister type in each location that contained fuel. The following abbreviations are used in the grid maps for canister type designation: IA = Mark 1 aluminum, IS = Mark 1 stainless steel, and 2 = Mark 2 stainless steel. An overall summary of the canister distribution survey is presented in Table 1. The total number of canisters found to contain fuel was 3842, with 20% being Mark 1 Al, 25% being Mark 1 SS, and 55% being Mark 2 SS. The aluminum canisters were predominantly located in the East and West bays of the basin.

  5. Uranium geochemistry of Orca Basin

    NASA Astrophysics Data System (ADS)

    Weber, F. F., Jr.; Sackett, W. M.

    1981-08-01

    Orca Basin, an anoxic, brine-filled depression at a depth of 2200 m in the Northwestern Gulf of Mexico continental slope, has been studied with respect to its uranium geochemistry. Uranium concentration profiles for four cores from within the basin were determined by delayed-neutron counting. Uranium concentrations ranged from 2.1 to 4.1 ppm on a salt-free and carbonate-corrected basis. The highest uranium concentrations were associated with the lowest percentage and δ 13C organic carbon values. For comparison, cores frm the brine-filled Suakin and Atlantis II Deeps, both in the Red Sea, were also analyzed. Uranium concentrations ranged from 1.2 to 2.6 ppm in the Suakin Deep and from 8.0 to 11.0 ppm in the Atlantis II Deep. No significant correlation was found between uranium concentrations and organic carbon concentrations and δ 13C values for these cores. Although anoxic conditions are necessary for significant uranium uptake by non-carbonate marine sediments, other factors such as dilution by rapidly depositing materials and uranium supply via mixing and diffusion across density gradients may be as important in determining uranium concentrations in hypersaline basin sediments.

  6. Biological science in the Great Basin

    USGS Publications Warehouse

    U.S. Geological Survey

    2005-01-01

    The Great Basin is an expanse of desert and high moun-tains situated between the Rocky Mountains and the Sierra Nevada of the western United States. The most explicit description of the Great Basin is that area in the West where surface waters drain inland. In other words, the Great Basin is comprised of many separate drainage areas - each with no outlet. What at first glance may appear as only a barren landscape, the Great Basin upon closer inspection reveals island mountains, sagebrush seas, and intermittent aquatic habitats, all teeming with an incredible number and variety of plants and animals. Biologists at the USGS are studying many different species and ecosystems in the Great Basin in order to provide information about this landscape for policy and land-management decision-making. The following stories represent a few of the many projects the USGS is conducting in the Great Basin.

  7. The geologic history of Margaritifer basin, Mars

    NASA Astrophysics Data System (ADS)

    Salvatore, M. R.; Kraft, M. D.; Edwards, C. S.; Christensen, P. R.

    2016-03-01

    In this study, we investigate the fluvial, sedimentary, and volcanic history of Margaritifer basin and the Uzboi-Ladon-Morava outflow channel system. This network of valleys and basins spans more than 8000 km in length, linking the fluvially dissected southern highlands and Argyre basin with the northern lowlands via Ares Vallis. Compositionally, thermophysically, and morphologically distinct geologic units are identified and are used to place critical relative stratigraphic constraints on the timing of geologic processes in Margaritifer basin. Our analyses show that fluvial activity was separated in time by significant episodes of geologic activity, including the widespread volcanic resurfacing of Margaritifer basin and the formation of chaos terrain. The most recent fluvial activity within Margaritifer basin appears to terminate at a region of chaos terrain, suggesting possible communication between surface and subsurface water reservoirs. We conclude with a discussion of the implications of these observations on our current knowledge of Martian hydrologic evolution in this important region.

  8. UPPER SNAKE RIVER PRIORITY BASIN ACCOMPLISHMENT PLAN, APRIL 1973

    EPA Science Inventory

    The Upper Snake Accomplishment Basin (17040104, 170402, 170501) is defined as the Idaho and Oregon portions of 2 STORET Basins, the Upper Snake Basin and the Central Snake Basin. The Basin drains approximately 62,100 square miles in Southern Idaho and Southeastern Oregon. Four ...

  9. The active Zot domain (aa 288–293) increases ZO-1 and myosin 1C serine/threonine phosphorylation, alters interaction between ZO-1 and its binding partners, and induces tight junction disassembly through proteinase activated receptor 2 activation

    PubMed Central

    Goldblum, Simeon E.; Rai, Usha; Tripathi, Amit; Thakar, Manjusha; De Leo, Luigina; Di Toro, Nicola; Not, Tarcisio; Ramachandran, Rithwik; Puche, Adam C.; Hollenberg, Morley D.; Fasano, Alessio

    2011-01-01

    Vibrio cholerae-derived zonula occludins toxin (Zot) is a multifunctional protein that reversibly disassembles intestinal tight junctions (tjs). Zot structure-function analysis has mapped this activity to aa 288–293, named AT1002. AT1002 reduced transepithelial electrical resistance across rat small intestine, ex vivo, as did Zot and its processed mature form, ΔG. AT1002 increased in vivo permeability to sugar tracers, whereas scrambled control peptides did not. Binding and barrier assays in proteinase activated receptor (PAR)2-expressing and PAR2-null cells established AT1002 activity to be PAR2 dependent. Coincident with the increased intestinal permeability, confocal microscopy of AT1002-exposed rat intestinal IEC6 cells revealed displacement of ZO-1 and occludin from intercellular boundaries. In coimmunoprecipitation assays, AT1002 decreased ZO-1-occludin and ZO-1-claudin 1 interactions coincident with PKCα-dependent ZO-1 serine/threonine phosphorylation. Further, AT1002 increased serine phosphorylation of myosin 1C and, at the same time, transiently diminished its association with ZO-1. The COOH-terminal domain of ZO-1 was required for its association with myosin 1C. These data indicate that the NH2-terminal portion of active Zot contains a PAR2-activating motif, FCIGRL, that increases PKCα-dependent ZO-1 and myosin 1C serine/threonine phosphorylation. These modifications provoke selective disengagement of ZO-1 from its binding partners, occludin, claudin 1, and myosin 1C, coincident with opening of tjs.—Goldblum, S. E., Rai, U., Tripathi, A., Thakar, M., De Leo, L., Di Toro, N., Not, T., Ramachandran, R., Puche, A. C., Hollenberg, M. D., Fasano, A. The active Zot domain (aa 288–293) increases ZO-1 and myosin 1C serine/threonine phosphorylation, alters interaction between ZO-1 and its binding partners, and induces tight junction disassembly through proteinase activated receptor 2 activation. PMID:20852064

  10. Reserves in western basins: Part 1, Greater Green River basin

    SciTech Connect

    Not Available

    1993-10-01

    This study characterizes an extremely large gas resource located in low permeability, overpressured sandstone reservoirs located below 8,000 feet drill depth in the Greater Green River basin, Wyoming. Total in place resource is estimated at 1,968 Tcf. Via application of geologic, engineering and economic criteria, the portion of this resource potentially recoverable as reserves is estimated. Those volumes estimated include probable, possible and potential categories and total 33 Tcf as a mean estimate of recoverable gas for all plays considered in the basin. Five plays (formations) were included in this study and each was separately analyzed in terms of its overpressured, tight gas resource, established productive characteristics and future reserves potential based on a constant $2/Mcf wellhead gas price scenario. A scheme has been developed to break the overall resource estimate down into components that can be considered as differing technical and economic challenges that must be overcome in order to exploit such resources: in other words, to convert those resources to economically recoverable reserves. Total recoverable reserves estimates of 33 Tcf do not include the existing production from overpressured tight reservoirs in the basin. These have estimated ultimate recovery of approximately 1.6 Tcf, or a per well average recovery of 2.3 Bcf. Due to the fact that considerable pay thicknesses can be present, wells can be economic despite limited drainage areas. It is typical for significant bypassed gas to be present at inter-well locations because drainage areas are commonly less than regulatory well spacing requirements.

  11. Reserve estimates in western basins. Part 2: Piceance Basin

    SciTech Connect

    1995-10-01

    This study characterizes an extremely large gas resource located in low permeability, sandstone reservoirs of the Mesaverde group in the Piceance Basin, Colorado. Total in place resource is estimated at 307.3 Tcf. Via application of geologic, engineering and economic criteria, the portion of this resource potentially recoverable as reserves is estimated. Those volumes estimated include probable, possible and potential categories and total 5.8 Tcf as a mean estimate of recoverable gas for all plays considered in the basin. About 82.6% of the total evaluated resource is contained within sandstones that have extremely poor reservoir properties with permeabilities considered too low for commerciality using current frac technology. Cost reductions and technology improvements will be required to unlock portions of this enormous resource. Approximately 2.7% of the total resource is contained within sandstone reservoirs which do not respond to massive hydraulic fracture treatments, probably due to their natural lenticular nature. Approximately 6.8% of the total resource is located in deeply buried settings below deepest established production. Approximately 7.9% of the total resource is considered to represent tight reservoirs that may be commercially exploited using today`s hydraulic fracturing technology. Recent technology advances in hydraulic fracturing practices in the Piceance Basin Mesaverde has resulted in a marked improvement in per well gas recovery which, where demonstrated, has been incorporated into the estimates provided in this report. This improvement is so significant in changing the risk-reward relationship that has historically characterized this play, that previously uneconomic areas and resources will graduate to the economically exploitable category. 48 refs., 96 figs., 18 tabs.

  12. Petroleum system of the Gippsland Basin, Australia

    USGS Publications Warehouse

    Bishop, Michele G.

    2000-01-01

    The Gippsland Basin Province 3930, located on the southeastern coast of Australia, is formed from two successive failed rifts that developed into a passive margin during the Cretaceous. Formation of this basin is related to the break up of Gondwana, which resulted in the separation of Antarctica from Australia, and the separation of the New Zealand and Lord Howe Rise continental crust from Australia. Coals and coaly shales of Late Cretaceous through Eocene age are the source rocks for oil and gas that accumulated predominantly in anticlinal traps. The basin was Australia?s major producing basin until 1996 when daily oil/condensate production from the North West Shelf surpassed it.

  13. Petroleum geology of Norton basin, Alaska

    SciTech Connect

    Fisher, M.A.

    1982-03-01

    Basement rocks beneath the main part of the Norton basin were deformed and heated during the Late Jurassic and Early Cretaceous to the extent that these rocks were not capable of generating hydrocarbons when the basin formed during the latest Cretaceous or early Paleogene. Consequently, source rocks for oil, if they exist, are most likely to be within the basin fill. If the Norton basin began to form 65 m.y. ago, subsided at a nearly constant rate, and had an average geothermal gradient of between 35 and 45/sup 0/C/km, then rocks as young as late Oligocene are in the oil window (vitrinite reflectance between 0.65 and 1.30%). The appearance on seismic sections of reflections from rocks in and below the calculated oil window suggests that these rocks were deposited in a nonmarine environment. Thus, gas and condensate are the most likely hydrocarbons to be present in the basin. Because of their shallow depth of burial, Neogene (possibly marine) rocks are not likely to be thermally mature anywhere in the basin. Deep parts of the basin formed as isolated faultbounded lows; consequently, the volume of mature rocks makes up at most 11% of the total basin fill. Numerous potential traps for hydrocarbons exist in the Norton basin; the traps include fractured or weathered basement rocks in horsts, strata in alluvial fans on the flanks of horsts, and arched strata over horsts.

  14. Late Paleozoic structural evolution of Permian basin

    SciTech Connect

    Ewing, T.E.

    1984-04-01

    The southern Permian basin is underlain by the NNW-trending Central Basin disturbed belt of Wolfcamp age (Lower Permian), the deep Delaware basin to its west, and the shallower Midland basin to its eat. The disturbed belt is highly segmented with zones of left-lateral offset. Major segments from south to north are: the Puckett-Grey Ranch zone; the Fort Stockton uplift; the Monahans transverse zone; the Andector ridges and the Eunice ridge; the Hobbs transverse zone; and the Tatum ridges, which abut the broad Roosevelt uplift to the north. The disturbed belt may have originated along rift zones of either Precambrian or Cambrian age. The extent of Lower and Middle Pennsylvanian deformation is unclear; much of the Val Verde basin-Ozona arch structure may have formed then. The main Wolfcamp deformation over thrust the West Texas crustal block against the Delaware block, with local denudation of the uplifted edge and eastward-directed backthrusting into the Midland basin. Latter in the Permian, the area was the center of a subcontinental bowl of subsidence - the Permian basin proper. The disturbed belt formed a pedestal for the carbonate accumulations which created the Central Basin platform. The major pre-Permian reservoirs of the Permian basin lie in large structural and unconformity-bounded traps on uplift ridges and domes. Further work on the regional structural style may help to predict fracture trends, to assess the timing of oil migration, and to evaluate intrareservoir variations in the overlying Permian giant oil fields.

  15. Basin Management under the Global Climate Change (Take North-East Asia Heilongjiang -Amur Basin and Taihu Basin For Example)

    NASA Astrophysics Data System (ADS)

    Liu, S.; Zhou, Z.; Zhong, G.; Zhang, X.

    2015-12-01

    The impact of global climate change on environment and society causes increasingly concern in different countries around the world. The main climate characteristic values, such as precipitation and temperature, have been changed, which leads to the variation of water resources, especially in large basins. Heilongjiang-Amur Basin and Taihu Basin are two large and important basins in China with large area and population. As global climate change and human activities have siganificant impacts on hydrology and water resources in two basins, the analysis of climate change are of great value. In this study, in Heilongjiang-Amur Basin, precipitation and temperature are investigated and their variation are predicted. And in Taihu Basin, precipitation including plum rain and typhoon, are studied and the variation trend of precipitation is predicted. Hence, the impacts of global climate change are assessed. From the result, it shows that the average temperature will continue to increase, and the precipitation will reduce first and then turn to increase in these two basins. It demonstrates that the water resources have been affected a lot by climate change as well as human activities. And these conclusions are provided as reference for policy makers and basin authorities in water resources management and natural hazards mitigation. Meanwhile, according to basins' particualr characters, the suggestions to future water resources management in two basins are given, and more scientific, comprehensive and sustained managements are required. Especially, in Heilongjiang-Amur River, which is a boundary river between China and Russia, it is very essential to enhance the cooperation between two countries.

  16. Regional geophysics and the basement of cratonic basins: a comparative study with the Michigan basin

    SciTech Connect

    Hinze, W.J.; Lidiak, E.G.

    1986-08-01

    The basement of the Michigan basin consists of four major provinces - the complex metasedimentary, metavolcanic, and igneous rocks of the Penokean orogenic assemblage in the north, the felsic anorogenic igneous rocks to the south, the highly metamorphosed schists, gneisses, and related igneous intrusions of the Grenville province in the east, and a middle Proterozoic rift zone, which transects the basin from the north to the southeast margin. Sparse basement drill holes and characteristic geophysical patterns support this interpretation. The direct geologic information on the basement of other cratonic basins is not as well known. However, regional geophysical surveys and sparse, poorly distributed basement drill holes provide information on the complex character and structural relationships of the basement of other basins. Like the Michigan basin, many cratonic basins (e.g., Illinois, Williston, and Paris basins) are underlain by dense and commonly more magnetic rocks than adjacent areas. As in the Michigan basin, these rocks are interpreted to have a profound effect on the origin and tectonic development of the basins. Geologic and geophysical evidence indicates that many of these dense basement rocks originated in rifts that formed hundreds of millions of years prior to basin development. A comparison of the basement in cratonic basins provides important constraints on the origin and tectonic development of the Michigan basin.

  17. Delaware Basin Monitoring Annual Report

    SciTech Connect

    Washington Regulatory and Environmental Services; Washington TRU Solutions LLC

    2001-09-28

    The Delaware Basin Drilling Surveillance Program (DBDSP) is designed to monitor drilling activities in the vicinity of the Waste Isolation Pilot Plant (WIPP). This program is based on Environmental Protection Agency (EPA) requirements. EPA requires the Department of Energy (DOE) to demonstrate the expected performance of the disposal system using a probabilistic risk assessment or performance assessment (PA). This PA must show that the expected repository performance will not release radioactive material above limits set by the EPA's standard and must consider inadvertent drilling into the repository at some future time.

  18. 75 FR 43915 - Basin Electric Power Cooperative: Deer Creek Station

    Federal Register 2010, 2011, 2012, 2013, 2014

    2010-07-27

    ... Rural Utilities Service Basin Electric Power Cooperative: Deer Creek Station AGENCY: Rural Utilities... CFR Part 1794), and the Western Area Power Administration's (Western) NEPA implementing regulations... environmental impacts of and alternatives to Basin Electric Power Cooperative's (Basin Electric) application...

  19. Seismic Characterization of the Jakarta Basin

    NASA Astrophysics Data System (ADS)

    Cipta, A.; Saygin, E.; Cummins, P. R.; Masturyono, M.; Rudyanto, A.; Irsyam, M.

    2015-12-01

    Jakarta, Indonesia, is home to more than 10 million people. Many of these people live in seismically non-resilient structures in an area that historical records suggest is prone to earthquake shaking. The city lies in a sedimentary basin composed of Quaternary alluvium that experiences rapid subsidence (26 cm/year) due to groundwater extraction. Forecasts of how much subsidence may occur in the future are dependent on the thickness of the basin. However, basin geometry and sediment thickness are poorly known. In term of seismic hazard, thick loose sediment can lead to high amplification of seismic waves, of the kind that led to widespread damage in Mexico city during the Michoacan Earthquake of 1985. In order to characterize basin structure, a temporary seismograph deployment was undertaken in Jakarta in Oct 2013- Jan 2014. A total of 96 seismic instrument were deployed throughout Jakarta were deployed throughout Jakarta at 3-5 km spacing. Ambient noise tomography was applied to obtain models of the subsurface velocity structure. Important key, low velocity anomalies at short period (<8s) correspond to the main sedimentary sub-basins thought to be present based on geological interpretations of shallow stratigraphy in the Jakarta Basin. The result shows that at a depth of 300 m, shear-wave velocity in the northern part (600 m/s) of the basin is lower than that in the southern part. The most prominent low velocity structure appears in the northwest of the basin, down to a depth of 800 m, with velocity as low as 1200 m/s. This very low velocity indicates the thickness of sediment and the variability of basin geometry. Waveform computation using SPECFEM2D shows that amplification due to basin geometry occurs at the basin edge and the thick sediment leads to amplification at the basin center. Computation also shows the longer shaking duration occurrs at the basin edge and center of the basin. The nest step will be validating the basin model using earthquake events

  20. Basin-scale relations via conditioning

    USGS Publications Warehouse

    Troutman, B.M.; Karlinger, M.R.; Guertin, D.P.

    1989-01-01

    A rainfall-runoff model is used in conjunction with a probabilistic description of the input to this model to obtain simple regression-like relations for basin runoff in terms of basin and storm characteristics. These relations, similar to those sought in regionalization studies, are computed by evaluating the conditional distribution of model output given basin and storm characteristics. This method of conditioning provides a general way of examining model sensitivity to various components of model input. The resulting relations may be expected to resemble corresponding relations obtained by regionalization using actual runoff to the extent that the rainfall-runoff model and the model input specification are physically realistic. The probabilistic description of model input is an extension of so-called "random-model" of channel networks and involves postulating an ensemble of basins and associated probability distributions that mimic the variability of basin characteristics seen in nature. Application is made to small basins in the State of Wyoming. Parameters of the input variable distribution are estimated using data from Wyoming, and basin-scale relations are estimated both, parametrically and nonparametrically using model-generated runoff from simulated basins. Resulting basin-scale relations involving annual flood quantiles are in reasonable agreement with those presented in a previous regionalization study, but error estimates are smaller than those in the previous study, an artifact of the simplicity of the rainfall-runoff model used in this paper. We also obtain relations for peak of the instantaneous unit hydrograph which agree fairly well with theoretical relations given in the literature. Finally, we explore the issues of sensitivity of basin-scale, relations and error estimates to parameterization of the model input probability distribution and of how this sensitivity is related to making inferences about a particular ungaged basin. ?? 1989 Springer-Verlag.

  1. Cenozoic evolution of San Joaquin basin, California

    SciTech Connect

    Bartow, J.A.

    1988-03-01

    The Neogene San Joaquin basin in the southern part of the 700-km long Great Valley of California is a successor to a late Mesozoic and earliest Tertiary forearc basin. The transition from forearc basin to the more restricted Neogene marine basin occurred principally during the Paleogene as the plate tectonic setting changed from oblique convergence to normal convergence, and finally to the initiation of tangential (transform) movement near the end of the Oligocene. Regional-scale tectonic events that affected the basin include: (1) clockwise rotation of the southernmost Sierra Nevada, and large-scale en echelon folding in the southern Diablo Range, both perhaps related to Late Cretaceous and early Tertiary right slip on the proto-San-Andreas fault; (2) regional uplift of southern California in the Oligocene that resulted from the subduction of the Pacific-Farallon spreading ridge: (3) extensional tectonism in the Basin and Range province, particularly in the Miocene; (4) wrench tectonism adjacent to the San Andreas fault in the Neogene; (5) northeastward emplacement of a wedge of the Franciscan complex at the west side of the Sierran block, with associated deep-seated thrusting in the late Cenozoic; and (6) the accelerated uplift of the Sierra Nevada beginning in the late Miocene. Neogene basin history was controlled principally by the tectonic effects of the northwestward migration of the Mendocino triple junction along the California continental margin and by the subsequent wrench tectonism associated with the San Andreas fault system. East-west compression in the basin, resulting from extension in the Basin and Range province was an important contributing factor to crustal shortening at the west side of the valley. Analysis of the sedimentary history of the basin, which was controlled to some extent by eustatic sea level change, enables reconstruction of the basin paleogeography through the Cenozoic.

  2. BASINS

    EPA Science Inventory

    Resource Purpose:The U.S EPA's water programs and their counterparts in states and pollution control agencies are increasingly emphasizing watershed- and water quality-based assessment and integrated analysis of point and nonpoint sources. Better Assessment Science Integra...

  3. Drought Variability in Mediterranean Basin

    NASA Astrophysics Data System (ADS)

    Meko, D. M.; Touchan, R.

    2010-12-01

    Projections from general circulation models are consistent in identifying the Mediterranean Basin as a region of expected drying in response to increased greenhouse gases. The Mediterranean and its bordering countries, while giving rise to the classic “Mediterranean” climate-type, are characterized by a complex precipitation climatology, with strong influences from land-sea contrasts, topography, intrusions of polar air from various lowland pathways, and occasional tropical influence from systems originating south of the Atlas Mountains. Identification of an anthropogenic signature of drying with instrumental climate data can benefit from information on the natural spatio-temporal variability of drought on time scales of decades to centuries in this complex precipitation regime. An expanding tree-ring network will eventually yield multi-century drought records for the region (117 chronologies now developed or in progress). Aspects of spatio-temporal variability on shorter time scales in the southern part of the Mediterranan Basin (south of about 40°N) are examined in this presentation with the aid of gridded precipitation, temperature and Z-index - a dimensionless intermediate variable in Palmer Drought Index computation. Cross-spectral analysis is applied to summarize covariance of drought-related variables across the region. Ocean-atmosphere circulation indices are explored for direct causative factors in episodes of exceptional widespread seasonal and multi-season drought in the region.

  4. 33 CFR 401.48 - Turning basins.

    Code of Federal Regulations, 2013 CFR

    2013-07-01

    ... 33 Navigation and Navigable Waters 3 2013-07-01 2013-07-01 false Turning basins. 401.48 Section 401.48 Navigation and Navigable Waters SAINT LAWRENCE SEAWAY DEVELOPMENT CORPORATION, DEPARTMENT OF TRANSPORTATION SEAWAY REGULATIONS AND RULES Regulations Seaway Navigation § 401.48 Turning basins. No vessel shall be turned about in any canal,...

  5. 33 CFR 401.48 - Turning basins.

    Code of Federal Regulations, 2012 CFR

    2012-07-01

    ... 33 Navigation and Navigable Waters 3 2012-07-01 2012-07-01 false Turning basins. 401.48 Section 401.48 Navigation and Navigable Waters SAINT LAWRENCE SEAWAY DEVELOPMENT CORPORATION, DEPARTMENT OF... vessels up to 180 m in overall length. (c) Turning Basin No. 3—Immediately south of Port Robinson (Mile...

  6. BASINS/HSPF WATERSHED MODEL TRAINING

    EPA Science Inventory

    Basins is an interactive Windows based interface to several DOS based water quality computer simulations, of which HSPF is one. The training course helped train 30 water quality modelers from the USEPA, States and Tribes in the use of Basins and HSPF. The training was three da...

  7. Sedimentary basins in Ross Sea, Antarctica

    SciTech Connect

    Cooper, A.K.; Davey, F.J.

    1986-07-01

    The Ross Sea lies in the Pacific sector of the Antarctic continental margin. Three major sedimentary basins (from east to west, the Eastern, Central, and Victoria Land basins) lie beneath the broad, deep continental shelf of the Ross Sea. These north-south-trending basins occur in the extensionally deformed region between East and West Antarctica. Multichannel seismic reflection (MCS) surveys have been conducted over these basins since 1980 by West German, French, Japanese, and US expeditions. The MCS and previous geophysical surveys have shown that the three basins contain 5-6 km of sedimentary rock, possibly Late Cretaceous and younger. An additional 6-8 km of sedimentary and volcanic rock lies within the deeper parts of the Victoria Land basin. The basins are separated by uplifted and eroded basement ridges covered by thin sedimentary sections. Each basin has distinct characteristics, commonly related to its extensional origin. Petroleum hydrocarbons are unknown from the Ross Sea region, with the possible exception of ethane gas recovered by the Deep Sea Drilling Project. Previous model studies, based on estimated sediment thickness, assumed temperature gradients, and postulated seismostratigraphy, indicate that hydrocarbons could be generated at depths of 3.5-6km within the sedimentary section. However, this hypothesis cannot be verified without further geologic and geophysical data from the Ross Sea region.

  8. Oil migration pattern in the Sirte Basin

    SciTech Connect

    Roohi, M.; Aburawi, R.M.

    1995-08-01

    Sirte Basin is an asymmetrical cratonic basin, situated in the north-central part of Libya. It covers an area of over 350,000km{sup 2} and is one of the most prolific oil-producing basins in the world. Sirte Basin is divided into large NW-SE trending sub-parallel platforms and troughs bounded by deep seated syndepositional normal faults. A very unique combination of thick sediments with rich source rocks in the troughs vs. thinner sediments with prolific reservoir rocks on the platforms accounts for the productivity of the basin. Analysis of oil migration pattern in the Sirte Basin will certainly help to discover the remaining reserves, and this can only be achieved if the important parameter of structural configuration of the basin at the time of oil migration is known. The present paper is an attempt to analyse the time of oil migration, to define the structural picture of the 4 Basin during the time of migration and to delineate the most probable connecting routes between the hydrocarbon kitchens and the oil fields.

  9. The structure of Nansen and Amundsen Basin

    NASA Astrophysics Data System (ADS)

    Micksch, U.; Jokat, W.

    2003-04-01

    During the AMORE expedition in August/September 2001, a US-German joint project, the Gakkel Ridge and the adjoining basins were investigated. In this contribution we report on the results of the seismic investigations in the Nansen Basin as well as in the Amundsen Basin. We obtained two almost parallel profiles through the Nansen Basin from the northeastern continental margin of Svalbard (29°E and 32°E) to the Gakkel Ridge at 17°E and 21°E. To investigate the Amundsen Basin, we left Gakkel Ridge at about 70°E towards Lomonossov Ridge for another transect. In total 1360 km of seismic reflection data with very good data quality were recorded. Parallel to the seismic reflection transects up to 30 sonobuoys were deployed. The data from both basins shows striking differences in the basement topography. While in the Nansen Basin the oceanic crust is more or less continuously shallowing, this is not the case in the Amundsen Basin. This points to some asymmetric spreading history of the Gakkel Ridge in northern and southern directions. Some of the Sonobuoys recorded also weak arrivals from the Moho discontinuity. The analysis of the wide angle and gravity data shows, that there are areas with a significant thinning of the oceanic crust. Results of the reflection and refraktion seismic as well as the gravity interpretation will be presented.

  10. Basin wildrye: the forgotten grass revisited

    Technology Transfer Automated Retrieval System (TEKTRAN)

    Basin wildrye was once a very abundant and widely occurring species throughout the landscapes of northern Nevada. When Captain Simpson, of the topographical Engineers, explored the route for a wagon road across the central Great Basin he marveled at the grass in the valley bottoms that reached to h...

  11. Water quality in the eastern Iowa basins

    USGS Publications Warehouse

    Kalkhoff, Stephen J.; Barnes, Kymm K.; Becher, Kent D.; Savoca, Mark E.; Schnoebelen, Douglas J.; Sadorf, Eric M.; Porter, Stephen D.; Sullivan, Daniel J.; Creswell, John

    2001-01-01

    The Eastern Iowa Basins Study Unit includes the Wapsipinicon, Cedar, Iowa, and Skunk River basins and covers approximately 19,500 square miles in eastern Iowa and southern Minnesota. More than 90 percent of the land in the study unit is used for agricultural purposes. Forested areas account for only 4 percent of the land area.

  12. Scientific review of great basin wildfire issues

    Technology Transfer Automated Retrieval System (TEKTRAN)

    The University Nevada Reno, College of Agriculture and Resource Concepts Inc., co-sponsored a Great Basin Wildfire Forum in September 2007 to address a “Scientific Review of the Ecological and Management History of Great Basin Natural Resources and Recommendations to Achieve Ecosystem Restoration”. ...

  13. Scientific Review of Great Basin Wildfire Issues

    Technology Transfer Automated Retrieval System (TEKTRAN)

    The University Nevada Reno, College of Agriculture and Resource Concepts Inc., co-sponsored a Great Basin Wildfire Forum in September 2007 to address a “Scientific Review of the Ecological and Management History of Great Basin Natural Resources and Recommendations to Achieve Ecosystem Restoration”. ...

  14. Relation between Tethys sea and Tarim basin

    SciTech Connect

    Wei Junchao )

    1988-08-01

    The Tarim basin is the largest continental basin in China. It is known as the heart of central Asia. Still it was related to the Mediterranean Sea in the geological past. Based on the investigations of paleontology, stratigraphy, tectonics, and remote sensing, it is suggested that Tethys and the Tarim basin should be connected from the Late Cretaceous to Miocene. The northern branch of the Tethys sea channel began to pass through the Alay gap and invade the Tarim basin at the beginning of the Late Cretaceous. Up to the Miocene, marine invasion and marine regression must have happened six times in the western Tarim basin. The Paleocene marine invasion encroached upon the widest area and lasted the longest of the six times, which extended to the region of the southern Hotan River. The occurrence of the Paleocene marine fossils in the Kuqa Seg indicates the influence of the marine invasion. At the end of the Miocene, seawater receded fully from the Tarim basin. A Miocene petroleum field has been found in the Yecheng Seg of the western Tarim basin. According to the relationship between Tethys and the Tarim basin, the potentialities of the Late Cretaceous-Miocene hydrocarbon source are considered to be great.

  15. Frontier sedimentary basins of New Zealand region

    SciTech Connect

    Beggs, J.M. )

    1991-03-01

    Petroleum-prospective basins of New Zealand began to form by mid-Cretaceous rifting of crustal elements previously assembled at the Gondwana continental margin. During the latest Cretaceous-early Cenozoic New Zealand separated from Australia and Antarctica by sea-floor spreading. An overall transgression in widely recorded in this post-rift phase, with decreasing clastic sediment supply as land area and relief were reduced. Mid-Cenozoic initiation of the modern plate boundary has resulted in uplift of mountain ranges, subsidence and filling of troughs, progradation of the shelf, and common reactivation or eversion of older structures. Petroleum potential of less explored basins can be compared to the productive Taranki basin. Source rocks are coal-rich deposits of the rift phase, also developed in Great South, Canterbury/Chatham, Western Southland, West Coast, and Northland basins. A different source contributes to oil and gas seeps on the East Coast, a continental margin during Late Cretaceous. The main reservoirs of Taranaki are early Cenozoic coastal and fluvial sands, also present in Great South, Canterbury, and West Coast and possibly other basins. Other Taranaki reservoirs include mid-Cenozoic limestone and Miocene turbidites, which are widespread in most other basins. Pliocene limestones have excellent reservoir potential on the East Coast. Late Cenozoic tectonics, essential to trap development and significant for maturation in Taranaki, have created similar structures in basins near the plate boundary but are less significant in the development of Great South, eastern Canterbury/Chatham, and Northland basins.

  16. Rifting Thick Lithosphere - Canning Basin, Western Australia

    NASA Astrophysics Data System (ADS)

    Czarnota, Karol; White, Nicky

    2016-04-01

    The subsidence histories and architecture of most, but not all, rift basins are elegantly explained by extension of ~120 km thick lithosphere followed by thermal re-thickening of the lithospheric mantle to its pre-rift thickness. Although this well-established model underpins most basin analysis, it is unclear whether the model explains the subsidence of rift basins developed over substantially thick lithosphere (as imaged by seismic tomography beneath substantial portions of the continents). The Canning Basin of Western Australia is an example where a rift basin putatively overlies lithosphere ≥180 km thick, imaged using shear wave tomography. Subsidence modelling in this study shows that the entire subsidence history of the <300 km wide and <6 km thick western Canning Basin is adequately explained by mild Ordovician extension (β≈1.2) of ~120 km thick lithosphere followed by post-rift thermal subsidence. This is consistent with the established model, described above, albeit with perturbations due to transient dynamic topography support which are expressed as basin-wide unconformities. In contrast the <150 km wide and ~15 km thick Fitzroy Trough of the eastern Canning Basin reveals an almost continuous period of normal faulting between the Ordovician and Carboniferous (β<2.0) followed by negligible post-rift thermal subsidence. These features cannot be readily explained by the established model of rift basin development. We attribute the difference in basin architecture between the western and eastern Canning Basin to rifting of thick lithosphere beneath the eastern part, verified by the presence of ~20 Ma diamond-bearing lamproites intruded into the basin depocentre. In order to account for the observed subsidence, at standard crustal densities, the lithospheric mantle is required to be depleted in density by 50-70 kg m-3, which is in line with estimates derived from modelling rare-earth element concentrations of the ~20 Ma lamproites and global isostatic

  17. Basins in ARC-continental collisions

    USGS Publications Warehouse

    Draut, Amy E.; Clift, Peter D.

    2012-01-01

    Arc-continent collisions occur commonly in the plate-tectonic cycle and result in rapidly formed and rapidly collapsing orogens, often spanning just 5-15 My. Growth of continental masses through arc-continent collision is widely thought to be a major process governing the structural and geochemical evolution of the continental crust over geologic time. Collisions of intra-oceanic arcs with passive continental margins (a situation in which the arc, on the upper plate, faces the continent) involve a substantially different geometry than collisions of intra-oceanic arcs with active continental margins (a situation requiring more than one convergence zone and in which the arc, on the lower plate, backs into the continent), with variable preservation potential for basins in each case. Substantial differences also occur between trench and forearc evolution in tectonically erosive versus tectonically accreting margins, both before and after collision. We examine the evolution of trenches, trench-slope basins, forearc basins, intra-arc basins, and backarc basins during arc-continent collision. The preservation potential of trench-slope basins is low; in collision they are rapidly uplifted and eroded, and at erosive margins they are progressively destroyed by subduction erosion. Post-collisional preservation of trench sediment and trench-slope basins is biased toward margins that were tectonically accreting for a substantial length of time before collision. Forearc basins in erosive margins are usually floored by strong lithosphere and may survive collision with a passive margin, sometimes continuing sedimentation throughout collision and orogeny. The low flexural rigidity of intra-arc basins makes them deep and, if preserved, potentially long records of arc and collisional tectonism. Backarc basins, in contrast, are typically subducted and their sediment either lost or preserved only as fragments in melange sequences. A substantial proportion of the sediment derived from

  18. China, JNOC start exploration in Tarim basin

    SciTech Connect

    Not Available

    1992-06-15

    This paper reports that a joint venture of China National Oil and Natural Gas Corp and Japan National Oil Corp (JNOC) has begun exploration in Northwest China's remote Tarim basin in Xinjiang Uygur Autonomous Region. That marks the first time China has allowed a foreign oil company to participate in exploration of the highly prospective basin. China pins much of its hope for the future on the Tarim basin as production declines from its older, mainstay fields in the east and offshore results have proved largely disappointing. The Chinese-Japanese combine began operations in the southwest part of the 560,000 sq km basin. The 200 member exploration team plans to complete a seismic survey covering 3,500 line km in the Kashi and Yecheng areas during the next 4 1/2 years. The survey follows a feasibility study that began last October covering 30,000 sq km in the basin.

  19. Hydrological research basins and the environment

    NASA Astrophysics Data System (ADS)

    Alley, V. M.; Warmerdam, P. M. M.

    The role and relative importance of experimental and representative basins in pre-dieting anthropogenic effects on water resources and the environment was the goal of the International Conference on Hydrological Research Basins and the Environment, held in Wageningen, the Netherlands, September 24-28, 1990. About 70 persons, almost exclusively from Europe, attended the meeting, which was organized by the Committee of the European Network of Experimental and Representative Basins and the National Committee of the Netherlands for the International Hydrological Program of Unesco.During the conference, the 3rd General Meeting of the European Network of Experimental and Representative Basins was held. This network of basins, covering nine countries in Europe, organizes periodic meetings and tries to enhance the compatibility of observations and methods of analysis, and to implement research projects of common interest.

  20. An alternative basin characteristic for use in estimating impervious area in urban Missouri basins

    USGS Publications Warehouse

    Southard, R.E.

    1986-01-01

    A previous regression analysis of flood peaks on urban basins in St. Louis County, Missouri, indicated that the basin characteristics of percentage of impervious area and drainage area were statistically significant for estimating the 2-, 5-, 10-, 25-, 50-. and 100-yr peak discharges at ungaged urban basins. In this statewide regression analysis of the urban basins for Missouri, an alternative basin characteristic called the percentage of developed area was evaluated. A regression analysis of the percentage of developed area (independent variable), resulted in a simple equation for computing percentage of impervious area. The percentage of developed area also was evaluated using flood-frequency data for 23 streamflow gaging stations, and the use of this variable was determined to be valid. Using nationwide data, an urban basin characteristic known as the basin development factor was determined to be valid for inclusion in urban regression equations for estimating flood flows. The basin development factor and the percentage of developed area were compared for use in regression equations to estimate peak flows of streams in Missouri. The equations with the basin development factor produced peak flow estimates with slightly smaller average standard errors of estimate than the equation with the percentage of developed area; however, this study indicates that there was not enough statistical or numerical difference to warrant using the basin development factor instead of the percentage of developed area in Missouri. The selection of a basin characteristic to describe the physical conditions of a drainage basin will depend not only on its contribution to accuracy of regression equations, but also on the ease of determining the characteristics; the percentage of developed area has this advantage. A correlation analysis was made by correlating drainage area to percentage of impervious area, the percentage of developed area, and the basin development factor. The results of

  1. Determination of the Relationship between Hydrologic Processes and Basin Morphometry - The Lamos Basin (Mersin, Turkey)

    NASA Astrophysics Data System (ADS)

    Yıldırım, Ümit; Güler, Cüneyt

    2016-04-01

    This study has been carried out to determine the relationship between hydrologic processes and basin morphometry in the Lamos Basin, which is located at the northern part of the Mersin (SE Turkey). The morphometric parameters of the basin was derived from the 1:25K scale topographic map sheets that were digitized using ArcGIS 9.3.1 geographic information system (GIS) software. Morphometric parameters considered in this study include basin area, basin length, basin perimeter length, stream order, stream number, stream length, mean stream length, basin relief, drainage density, stream frequency, drainage texture, bifurcation ratio, form factor, elongation ratio, overland flow length, relief ratio, and hypsometric integral. The results have shown that there are 1252 individual stream reaches with a total length of 1414.1 km in the Lamos basin, which covers an area of 1358 km2 and has a length of 103 km in the N-S direction. Furthermore, the basin has a medium drainage density of 1.04 1/km with a stream frequency and drainage texture values of 0.92 and 4.33, respectively. The basin can be classified as elongated because of the low values of elongation ratio (0.48) and form factor (0.12). The hypsometric integral of the basin (0.58) indicates that it is in the youth period and thus reasonably sensitive to erosion. The values of drainage texture, drainage density, and stream frequency indicate that the Lamos basin is moderately well drained, therefore overland flow in the basin is not expected to be so quick. Thus, in case of occurrence of sudden peak flows, sensitivity to the land sliding and erosion may increase further. As a result, it is suggested that human activities in the basin should be limited in areas in fairly close proximity to the present day stream network to prevent or reduce the risk to life and property.

  2. Plio-Pleistocene drainage development in an inverted sedimentary basin: Vera basin, Betic Cordillera, SE Spain

    NASA Astrophysics Data System (ADS)

    Stokes, Martin

    2008-08-01

    The Vera basin is one of a series of interconnected Neogene-Quaternary sedimentary basins located within the Internal Zone of the Betic Cordillera (southeast Spain). Since the Pliocene the Vera basin has been subjected to low uplift rates (11-21 m Ma - 1 ) and inverted via compressive tectonics that are related to the ongoing oblique collision between the African and Iberian plates. Within this paper the sedimentary and geomorphic response to basin inversion is explored. Sedimentary processes and environments are established for key stratigraphic units of the Pliocene/Plio-Pleistocene basin fill and Pleistocene dissectional landscape. These data are subsequently utilised to reconstruct an evolving basin palaeogeography. Fault and uplift data are employed to discuss the role of tectonically driven basin inversion for controlling the resultant palaeogeographic changes and associated patterns of drainage development. During the Early-Mid Pliocene the Vera basin was characterised by shallow marine shelf conditions (Cuevas Formation). A major palaeogeographic reorganisation occurred during the Mid-Late Pliocene. Strike-slip movement along the eastern basin margin, coupled with uplift and basin emergence created a protected, partially enclosed marine embayment that was conducive for Gilbert-type fan-delta sedimentation from fluvial inputs along the northern and eastern basin margins (Espíritu Santo Formation). The Vera basin then became fully continental and internally drained through the development of a consequent drainage network that formed following the withdrawal of marine conditions during the Late Pliocene to Early Pleistocene. Alluvial fans developed along the northern and western basin margins, grading to a bajada and terminating in a playa lake in central basin areas (Salmerón Formation). During the Early-Mid Pleistocene a switch from basin infilling to dissection took place, recorded by alluvial fan incision, a switch to braided river sedimentation and

  3. Preliminary evaluation of nominal drainage basin volume as a potentially useful morphometric parameter for small mountain basins

    SciTech Connect

    Keaton, J.R.

    1985-01-01

    Morphometric basin parameters have been used in quantitative geomorphic assessments since Horton's Hydrophysical Approach in 1945. A relationship between basin form and dominant process in small mountain basins in the western United States would be valuable for use in differentiating basins which produce deep-seated landslides from those which produce debris flows from debris slides. Drainage basin volume seems like it should be a parameter directly related to the dominant process operating in a basin. Consequently, it may be a potentially useful morphometric parameter. Nominal drainage basin volume is herein defined as the volume creates by the basin topography and linear projection of topographic contours across the basin. Incremental volume is computed from area encompassed by topographic contours and projections and the contour interval using the formula for the volume of the frustrum of a cone. Seven basins in the Wasatch Range and five in the Wasatch Plateau of Utah show strong relationship of log Basin Area to log Basin Volume (r/sup 2/ = 0.97). The relationship between average Basin Slope and log Basin Volume was poorer (r/sup 2/ = 0.78) than between Basin Slope and log Basin Area (r/sup 2/ = 0.87). This suggests that basin area may be a more useful parameter than basin volume, especially since area is more easily measured.

  4. Delaware basin/Central basin platform margin: The development of a subthrust deep-gas province in the Permian Basin

    SciTech Connect

    Purves, W.J. ); Ting, S.C. )

    1990-05-01

    A deep-gas-prone province was identified along the Delaware basin/Central Basin platform margin, a margin conventionally interpreted to be bounded by high-angle normal or high-angle reverse structures. Redefinition of the tectonic style between the Delaware basin and the adjacent platform resulted in the identification of this Delaware basin/Central Basin platform subthrust province and a giant prospect within it. Definition of a giant-sized gas prospect in northern Pecos County, Texas, revealed that portions of this margin may be characterized by shingled, low-angle, eastward-dipping, basement involved thrust faults. Interpretations suggest that hidden, subthrust footwall structures may trend discontinuously for greater than 100 mi along this structural margin. Subthrust footwall structures formed as basinal buttress points for the Central Basin platform to climb over the Delaware basin. In this area, structural relief of over 19,000 ft over a 10-mi width is believed due to stacking of low-angle thrust sheets. Seismic resolution of this subthrust margin has been complexed by allochtonous hanging-wall gravity-glide blocks and folds and by velocity changes in overlying syn- and posttectonic sediments associated with basin-to-shelf lithofacies changes. Statistical studies indicate that this deep-gas province has a play potential of greater than 10 tcf of gas, with individual prospect sizes exceeding 1 tcfg. The prospects defined along this trend are deep (approximately 20,000 ft) subthrust structural traps that are indigenously sourced and reservoired by dual-matrix porosity. Vitrinite supported maturation modeling suggests that these subthrust structures formed prior to catagenic conversion of the oldest source rocks to oil and later to gas. Tectonically fractured Ordovician Ellenburger and Devonian sediments are considered the principal reservoirs. Shales overlying reservoir intervals form vertical seals.

  5. Rocky Mountain Tertiary coal-basin models and their applicability to some world basins

    USGS Publications Warehouse

    Flores, R.M.

    1989-01-01

    Tertiary intermontane basins in the Rocky Mountain region of the United States contain large amounts of coal resources. The first major type of Tertiary coal basin is closed and lake-dominated, either mud-rich (e.g., North Park Basin, Colorado) or mud plus carbonate (e.g., Medicine Lodge Basin, Montana), which are both infilled by deltas. The second major type of Tertiary coal basin is open and characterized by a preponderance of sediments that were deposited by flow-through fluvial systems (e.g., Raton Basin, Colorado and New Mexico, and Powder River Basin, Wyoming and Montana). The setting for the formation of these coals varies with the type of basin sedimentation, paleotectonism, and paleoclimate. The mud-rich lake-dominated closed basin (transpressional paleotectonism and warm, humid paleoclimate), where infilled by sandy "Gilbert-type" deltas, contains thick coals (low ash and low sulfur) formed in swamps of the prograding fluvial systems. The mud- and carbonate-rich lake-dominated closed basin is infilled by carbonate precipitates plus coarse-grained fan deltas and fine-grained deltas. Here, thin coals (high ash and high sulfur) formed in swamps of the fine-grained deltas. The coarse-clastic, open basins (compressional paleotectonism and warm, paratropical paleoclimate) associated with flow-through fluvial systems contain moderately to anomalously thick coals (high to low ash and low sulfur) formed in swamps developed in intermittently abandoned portions of the fluvial systems. These coal development patterns from the Tertiary Rocky Mountain basins, although occurring in completely different paleotectonic settings, are similar to that found in the Tertiary, Cretaceous, and Permian intermontane coal basins in China, New Zealand, and India. ?? 1989.

  6. Development of foreland basins around western Sichuan basin, and implications for mountain building in eastern Tibet

    NASA Astrophysics Data System (ADS)

    Chen, S.; Liu, M.

    2014-12-01

    The Sichuan basin is surrounded by the Tibetan Plateau to the west, and the Michang Shan and Daba Shan mountains to the north and northwest. Foreland basins have been developed along the western and northern margins of the Sichuan basin since Triassic, receiving sediments with significant along-strike variations. These sediment records provide useful insights into the history of mountain building around the Sichuan Basin. We have collected exploration well data from western Sichuan Basin. Using backstripping, we reconstructed the basement deformation history, which reflect sedimentary and tectonic loadings related to mountain building. We used a 3-D numerical modeling technique with multi-grid technique to simulate flexural deformation of the Sichuan Basin lithosphere, and to infer tectonic loading and mountain building along western and northern margins of the Sichuan Basin from the late Triassic to the Cenozoic. Our results suggest that the shortening of the Daba Shan and Michuan Shan orogens mainly occurred during the late Jurassic-Cretaceous. During Cenozoic, the tectonic loading mainly occurred along the southwestern margins of the Sichuan Basin, corresponding to the development of the Longmen Shan mountain belt. The tectonic loading of the northern Longmen Shan on the Sichuan Basin has been markedly reduced since the Cenozoic, evidenced by the lack of Cenozoic foreland basin development. This indicates mechanical decoupling between uplift of the Tibetan Plateau and the Sichuan Basin, consistent with the deep down-cutting of the Longmen Shan fault and predominantly strike-slip motion on the fault. The limited Cenozoic foreland basin development in the southwestern margin of the Sichuan Basin is consistent with localized high-angle thrusting of the southern Longmen Shan mountains. This work was supported by the National Natural Science Foundation of China (grants 41104046).

  7. Delaware Basin Monitoring Annual Report

    SciTech Connect

    Washington Regulatory and Environmental Services

    1999-09-30

    The Delaware Basin Drilling Surveillance Program (DBDSP) is designed to monitor drilling activities in the vicinity of the Waste Isolation Pilot Plant (WIPP). This program is based on Environmental Protection Agency (EPA) requirements. The EPA environmental standards for the management and disposal of transuranic (TRU) radioactive waste are codified in 40 CFR Part 191 (EPA 1993). Subparts B and C of the standard address the disposal of radioactive waste. The standard requires the Department of Energy (DOE) to demonstrate the expected performance of the disposal system using a probabilistic risk assessment or performance assessment (PA). This PA must show that the expected repository performance will not release radioactive material above limits set by the EPA's standard. This assessment must include the consideration of inadvertent drilling into the repository at some future time.

  8. Delaware Basin Monitoring Annual Report

    SciTech Connect

    Washington Regulatory and Environmental Services; Washington TRU Solutions LLC

    2000-09-28

    The Delaware Basin Drilling Surveillance Program (DBDSP) is designed to monitor drilling activities in the vicinity of the Waste Isolation Pilot Plant (WIPP). This program is based on Environmental Protection Agency (EPA) requirements. The EPA environmental standards for the management and disposal of transuranic (TRU) radioactive waste are codified in 40 CFR Part 191 (EPA 1993). Subparts B and C of the standard address the disposal of radioactive waste. The standard requires the Department of Energy (DOE) to demonstrate the expected performance of the disposal system using a probabilistic risk assessment or performance assessment (PA). This PA must show that the expected repository performance will not release radioactive material above limits set by the EPA's standard. This assessment must include the consideration of inadvertent drilling into the repository at some future time.

  9. Delaware Basin Monitoring Annual Report

    SciTech Connect

    Washington Regulatory and Environmental Services; Washington TRU Solutions LLC

    2002-09-21

    The Delaware Basin Drilling Surveillance Program (DBDSP) is designed to monitor drilling activities in the vicinity of the Waste Isolation Pilot Plant (WIPP). This program is based on Environmental Protection Agency (EPA) requirements. The EPA environmental standards for the management and disposal of transuranic (TRU) radioactive waste are codified in 40 CFR Part 191 (EPA 1993). Subparts B and C of the standard address the disposal of radioactive waste. The standard requires the Department of Energy (DOE) to demonstrate the expected performance of the disposal system using a probabilistic risk assessment or performance assessment (PA). This PA must show that the expected repository performance will not release radioactive material above limits set by the EPA's standard. This assessment must include the consideration of inadvertent drilling into the repository at some future time.

  10. Delaware Basin Monitoring Annual Report

    SciTech Connect

    Washington Regulatory and Environmental Services; Washington TRU Solutions LLC

    2005-09-30

    The Delaware Basin Drilling Surveillance Program (DBDSP) is designed to monitor drilling activities in the vicinity of the Waste Isolation Pilot Plant (WIPP). This program is based on Environmental Protection Agency (EPA) requirements. The EPA environmental standards for the management and disposal of transuranic (TRU) radioactive waste are codified in 40 CFR Part 191 (EPA 1993). Subparts B and C of the standard address the disposal of radioactive waste. The standard requires the Department of Energy (DOE) to demonstrate the expected performance of the disposal system using a probabilistic risk assessment or performance assessment (PA). This PA must show that the expected repository performance will not release radioactive material above limits set by the EPA's standard. This assessment must include the consideration of inadvertent drilling into the repository at some future time.

  11. Delaware Basin Monitoring Annual Report

    SciTech Connect

    Washington Regulatory and Environmental Services; Washington TRU Solutions LLC

    2004-09-30

    The Delaware Basin Drilling Surveillance Program (DBDSP) is designed to monitor drilling activities in the vicinity of the Waste Isolation Pilot Plant (WIPP). This program is based on Environmental Protection Agency (EPA) requirements. The EPA environmental standards for the management and disposal of transuranic (TRU) radioactive waste are codified in 40 CFR Part 191 (EPA 1993). Subparts B and C of the standard address the disposal of radioactive waste. The standard requires the Department of Energy (DOE) to demonstrate the expected performance of the disposal system using a probabilistic risk assessment or performance assessment (PA). This PA must show that the expected repository performance will not release radioactive material above limits set by the EPA's standard. This assessment must include the consideration of inadvertent drilling into the repository at some future time.

  12. Delaware Basin Monitoring Annual Report

    SciTech Connect

    Washington Regulatory and Environmental Services; Washington TRU Solutions LLC

    2003-09-30

    The Delaware Basin Drilling Surveillance Program (DBDSP) is designed to monitor drilling activities in the vicinity of the Waste Isolation Pilot Plant (WIPP). This program is based on Environmental Protection Agency (EPA) requirements. The EPA environmental standards for the management and disposal of transuranic (TRU) radioactive waste are codified in 40 CFR Part 191 (EPA 1993). Subparts B and C of the standard address the disposal of radioactive waste. The standard requires the Department of Energy (DOE) to demonstrate the expected performance of the disposal system using a probabilistic risk assessment or performance assessment (PA). This PA must show that the expected repository performance will not release radioactive material above limits set by the EPA's standard. This assessment must include the consideration of inadvertent drilling into the repository at some future time.

  13. Metabolic principles of river basin organization

    NASA Astrophysics Data System (ADS)

    Rodriguez-Iturbe, I.; Caylor, K. K.; Rinaldo, A.

    2011-12-01

    The metabolism of a river basin is defined as the set of processes through which the basin maintains its structure and responds to its environment. Green (or biotic) metabolism is measured via transpiration and blue (or abiotic) metabolism through runoff. A principle of equal metabolic rate per unit area throughout the basin structure is developed and tested in a river basin characterized by large heterogeneities in precipitation, vegetation, soil, and geomorphology. This principle is suggested to have profound implications for the spatial organization of river basin hydrologic dynamics, including the minimization of energy expenditure known to control the scale-invariant characteristics of river networks over several orders of magnitude. Empirically derived, remarkably constant rates of average transpiration per unit area through the basin structure lead to a power law for the probability distribution of transpiration from a randomly chosen subbasin. The average runoff per unit area, evaluated for subbasins of a wide range of topological magnitudes, is also shown to be remarkably constant independently of size. A similar result is found for the rainfall after accounting for canopy interception. Allometric scaling of metabolic rates with size, variously addressed in the biological literature and network theory under the label of Kleiber's law, is similarly derived. The empirical evidence suggests that river basin metabolic activity is linked with the spatial organization that takes place around the drainage network and therefore with the mechanisms responsible for the fractal geometry of the network, suggesting a new coevolutionary framework for biological, geomorphological, and hydrologic dynamics.

  14. Metabolic principles of river basin organization.

    PubMed

    Rodriguez-Iturbe, Ignacio; Caylor, Kelly K; Rinaldo, Andrea

    2011-07-19

    The metabolism of a river basin is defined as the set of processes through which the basin maintains its structure and responds to its environment. Green (or biotic) metabolism is measured via transpiration and blue (or abiotic) metabolism through runoff. A principle of equal metabolic rate per unit area throughout the basin structure is developed and tested in a river basin characterized by large heterogeneities in precipitation, vegetation, soil, and geomorphology. This principle is suggested to have profound implications for the spatial organization of river basin hydrologic dynamics, including the minimization of energy expenditure known to control the scale-invariant characteristics of river networks over several orders of magnitude. Empirically derived, remarkably constant rates of average transpiration per unit area through the basin structure lead to a power law for the probability distribution of transpiration from a randomly chosen subbasin. The average runoff per unit area, evaluated for subbasins of a wide range of topological magnitudes, is also shown to be remarkably constant independently of size. A similar result is found for the rainfall after accounting for canopy interception. Allometric scaling of metabolic rates with size, variously addressed in the biological literature and network theory under the label of Kleiber's law, is similarly derived. The empirical evidence suggests that river basin metabolic activity is linked with the spatial organization that takes place around the drainage network and therefore with the mechanisms responsible for the fractal geometry of the network, suggesting a new coevolutionary framework for biological, geomorphological, and hydrologic dynamics. PMID:21670259

  15. Petroleum potential of the Reggane Basin, Algeria

    SciTech Connect

    Boudjema, A.; Hamel, M.; Mohamedi, A.; Lounissi, R. )

    1990-05-01

    The intracratonic Reggane basin is located on the Saharan platform, southwest of Algeria. The basin covers an area of approximately 140,000 km{sup 2}, extending between the Eglab shield in the south and the Ougarta ranges in the north. Although exploration started in the early 1950s, only a few wells were drilled in this basin. Gas was discovered with a number of oil shows. The sedimentary fill, mainly Paleozoic shales and sandstones, has a thickness exceeding 5,000 m in the central part of the basin. The reservoirs are Cambrian-Ordovician, Siegenian, Emsian, Tournaisian, and Visean sandstones with prospective petrophysical characteristics. Silurian Upper Devonian and, to a lesser extent Carboniferous shales are the main source rocks. An integrated study was done to assess the hydrocarbon potential of this basin. Tectonic evolution source rocks and reservoirs distribution maturation analyses followed by kinetic modeling, and hydrogeological conditions were studied. Results indicate that gas accumulations could be expected in the central and deeper part of the basin, and oil reservoirs could be discovered on the basin edge.

  16. Nucleoside-2',3'/3',5'-bis(thio)phosphate antioxidants are also capable of disassembly of amyloid beta42-Zn(ii)/Cu(ii) aggregates via Zn(ii)/Cu(ii)-chelation.

    PubMed

    Hevroni, Bosmat Levi; Major, Dan Thomas; Dixit, Mudit; Mhashal, Anil Ranu; Das, Susanta; Fischer, Bilha

    2016-05-18

    Currently, there is an urgent need for biocompatible metal-ion chelators capable of antioxidant activity and disassembly of amyloid beta (Aβ)-aggregates as potential therapeutics for Alzheimer's disease (AD). We recently demonstrated the promising antioxidant activity of adenine/guanine 2',3' or 3',5'-bis(thio)phosphate analogues, 2'-dA/G3'5'PO/S and A2'3'PO/S, and their affinity to Zn(ii)-ions. These findings encouraged us to evaluate them as agents for the dissolution of Aβ42-Zn(ii)/Cu(ii) aggregates. Specifically, we explored their ability to bind Cu(ii)/Zn(ii)-ions, the geometry and stoichiometry of these complexes, Cu(ii)/Zn(ii)-binding-sites and binding mode, and the ability of these analogues to dissolve Aβ42-Zn(ii)/Cu(ii) aggregates, as well as their effect on the secondary structure of those aggregates. Finally, we identified the most promising agents for dissolution of Aβ42-Zn(ii)/Cu(ii) aggregates. Specifically, we observed the formation of a 1 : 1 complex between 2'-dG3'5'PO and Cu(ii), involving O4 ligands. Zn(ii) was coordinated by both thiophosphate groups of 2'-dA3'5'PS and A2'3'PS involving O2S2 ligands in a 1 : 1 stoichiometry. A2'3'PS dissolves Aβ42-Zn(ii) and Aβ42-Cu(ii) aggregates as effectively as, and 2.5-fold more effectively than EDTA, respectively. Furthermore, 2'-dG3'5'PS and A2'3'PS reverted the Aβ42-M(ii) structure, back to that of the free Aβ42. Finally, cryo-TEM and TEM images confirmed the disassembly of Aβ42 and Aβ42-M(ii) aggregates by A2'3'PS. Hence, 2'-dG3'5'PS and A2'3'PS may serve as promising scaffolds for new AD therapeutics, acting as both effective antioxidants and agents for solubilization of Aβ42-Cu(ii)/Zn(ii) aggregates. PMID:27109038

  17. Evaluation of Ordos Basin in China

    SciTech Connect

    Zhou, J.G.

    1996-06-01

    Ordos basin lies in the north-central China, in a compression tectonic regime, with an area of approximately 250,000 km{sup 2}, including several pay zones ranging from Cambrian to Jurassic. It is one of the earliest-formed marine to continental-superimposed basin in China, characterized by Proterozoic basin-marginal rifling and Lower-Paleozoic carbonate platform development followed by western thrusting and foreland depression during Mesozoic. It underwent several tectonic movements and is covered by several structural layers, with many play types developed, primarily thrust and anticlinal plays in the west, and differential compaction (river-channel sand lens) or drape as well as buried hill plays in the basin center and east. Ordos basin is a prolific gas basin with an estimated resource potential of gas 656,091 billion m{sup 3} in the Paleozoic strata and oil 2.0474 billion tons in the Mesozoic strata. In 1986, in the western part of the basin, the well Tian-1 on the Tianchi structure tested gas at a rate of 16 x 10{sup 4} m{sup 3}/d (about 5.6496 MCF per day). By year-end 1991, only 26 wells had been drilled in the Jingbian to Hengshan areas (northeastern part of the basin), but 16 of them flowed commercial gas, ranging from 3.2 x 10{sup 4} m{sup 3}/d to 126 x 10{sup 4} m{sup 3}/d. However, the gas pipe just starts budding. Therefore, there will be a lot of gas yet to find, and the most critical factor for petroleum potential of each local structure or play in this basin is the reservoir development.

  18. Groundwater Mounding Beneath Stormwater Infiltration Basins

    NASA Astrophysics Data System (ADS)

    Nimmer, M.; Thompson, A. M.; Misra, D.

    2007-12-01

    An accurate understanding of groundwater mound formation is important in the proper design of stormwater infiltration basins since these basins are often required to recharge a portion of pre-development infiltration volume. Mound formation due to localized recharge may reduce the infiltration rate of the basin and the ability of the soil to filter pollutants. The goal of this research was to understand groundwater mounding and the potential for contaminant transport resulting from recharge beneath stormwater infiltration basins. A 0.10 ha infiltration basin serving a 9.4 ha residential subdivision in Oconomowoc, Wisconsin was used in this study. Subsurface conditions included sand and gravel material and a groundwater table at 2.3 m below grade. Three storm events, 4.9 cm, 2.8 cm, and 4.3 cm, between August 2006 and April 2007 were modeled using the two-dimensional numerical model HYDRUS. The calibrated model was used to evaluate hypothetical basin operation scenarios for various basin sizes, soil types, ponding depths, and water table depths. The groundwater mound intersected the basin floor in most scenarios with loamy sand and sandy loam soils, an unsaturated thickness of 1.52 m, and a ponding depth of 0.61 m. No groundwater table response was observed with ponding depths less than 0.31 m with an unsaturated zone thickness of 6.09 m. The mound height was most sensitive to hydraulic conductivity and unsaturated zone thickness. A 7.6 cm sediment layer delayed the time to reach maximum mound height, but had a minimal effect on the magnitude of the mound. Mound heights increased as infiltration basin size increased.

  19. Stratigraphy of the Caloris basin, Mercury

    USGS Publications Warehouse

    McCauley, J.F.; Guest, J.E.; Schaber, G.G.; Trask, N.J.; Greeley, R.

    1981-01-01

    The 1300-km-diameter Caloris impact basin is surrounded by well-defined ejecta units that can be recognized from more than 1000 km, radially outward from the basin edge. A formal rock stratigraphic nomenclature is proposed for the Caloris ejecta units, which are collectively called the Caloris Group. Each of the individual formations within the Group are described and compared to similar rock units associated with the lunar Imbrium and Orientale basins. A crater degradation chronology, linked the the Caloris event, is also proposed to assist in stratigraphic correlation on a Mercury-wide basis. ?? 1981.

  20. Deep seismic expression of a foreland basin: Taranaki basin, New Zealand

    NASA Astrophysics Data System (ADS)

    Stern, T. A.; Davey, F. J.

    1990-10-01

    A deep seismic-reflection profile shot across the South Taranaki basin, New Zealand, indicates up to 10 km of crustal thickening beneath the Taranaki boundary fault at the eastern margin of the basin. The seismic data also show a broad flexure of the entire crust, the locus of the flexure-producing load appearing to be in the vicinity of the Taranaki boundary fault. Such crustal thickening and flexure suggest a compressional, foreland-basin style of late Cenozoic development rather than the rift-graben origin previously assumed. This change in interpretation for the South Taranaki basin has implications for evaluating the thermal history of the basin and its possibilities for hydrocarbon prospects. The study therefore demonstrates the value of deep seismic exploration of a hydrocarbon-bearing basin in its early stage of exploration.

  1. Discharge forecasts in mountain basins based on satellite snow cover mapping. [Dinwoody Creek Basin, Wyoming and the Dischma Basin, Switzerland

    NASA Technical Reports Server (NTRS)

    Martinec, J.; Rango, A. (Principal Investigator)

    1980-01-01

    The author has identified the following significant results. A snow runoff model developed for European mountain basins was used with LANDSAT imagery and air temperature data to simulate runoff in the Rocky Mountains under conditions of large elevation range and moderate cloud cover (cloud cover of 40% or less during LANDSAT passes 70% of the time during a snowmelt season). Favorable results were obtained for basins with area not exceeding serval hundred square kilometers and with a significant component of subsurface runoff.

  2. Geology of the Merit-Pila Coal Basin, Sarawak, Malaysia

    SciTech Connect

    Johari, D.; Abdullah, M.F. )

    1994-07-01

    This poster presentation focuses on the Tertiary Merit-Pila coal basin located in central Sarawak, Malaysia, with emphasis on the geology of the basin. The presentation includes (1) a map of the Tertiary coal basins of Malaysia, and (2) explanations on the geology of Merit-Pila coal basin by means of (a) a geological map, (b) geological sections, (c) a lithostratigraphic section of a typical area of the coal basin, (d) rock and coal samples from the basin, and (e) a figure describing the geological concept of the development of the coal basin. The poster session is designed to give a general picture of a typical Tertiary coal basin of Malaysia. The Merit-Pila coal basin is the best known coal basin and hosts more than 300 million MT of coal, the largest known coal resource in the country.

  3. BASIN STRUCTURE FROM TWO-DIMENSIONAL SEISMIC REFLECTION DATA, CRAZY MOUNTAINS BASIN, MONTANA

    SciTech Connect

    David J. Taylor

    2003-08-01

    Some 140 miles of multichannel seismic reflection data, acquired commercially in the 1970's, were reprocessed by the U.S. Geological Survey in late 2000 and early 2001 to interpret the subsurface geology of the Crazy Mountains Basin, an asymmetric Laramide foreland basin located in south-central Montana. The seismic data indicate that the northwestern basin margin is controlled by a thrust fault that places basement rocks over a thick (22,000 feet) sequence of Paleozoic and Mesozoic sedimentary rocks to the south. From the deep basin trough, Paleozoic through Tertiary rocks slope gently upward to the south and southeast. The northern boundary of the basin, which is not imaged well by the seismic data, appears to be folded over a basement ridge rather than being truncated against a fault plane. Seismic data along the basin margin to the south indicate that several fault controlled basement highs may have been created by thin-skinned tectonics where a series of shallow thrust faults cut Precambrian, Paleozoic, and early Mesozoic rocks, whereas, in contrast, Cretaceous and Tertiary strata are folded. The data are further interpreted to indicate that this fault-bounded asymmetric basin contains several structures that possibly could trap hydrocarbons, provided source rocks, reservoirs, and seals are present. In addition, faults in the deep basin trough may have created enough fracturing to enhance porosity, thus developing ''sweet spots'' for hydrocarbons in basin-centered continuous gas accumulations.

  4. K-Basins S/RIDS

    SciTech Connect

    Watson, D.J.

    1997-08-01

    The Standards/Requirements Identification Document (S/RID) is a list of the Environmental, Safety, and Health (ES{ampersand}H) and Safeguards and Security (SAS) standards/requirements applicable to the K Basins facility.

  5. K-Basins S/RIDS

    SciTech Connect

    Watson, D.J.

    1995-09-22

    The Standards/Requirements Identification Document(S/RID) is a list of the Environmental, Safety, and Health (ES&H) and Safeguards and Security (SAS) standards/requirements applicable to the K Basins facility

  6. Peak Ring Craters and Multiring Basins

    NASA Astrophysics Data System (ADS)

    Melosh, H. J.

    2015-09-01

    Understanding of the mechanics of peak-ring crater and basin formation has expanded greatly due to the high precision data on lunar gravity from GRAIL. Peak rings coincide with the edges of underlying mantle uplifts on the Moon.

  7. Seismic refraction profile in coral sea basin.

    PubMed

    Shor, G G

    1967-11-17

    A refraction profile near the south edge of Coral Sea Basin shows sediments, "second layer," and oceanic crust all thicker than normal for an oceanic station; normal mantle lies at a depth of 19 kilometers. PMID:17753600

  8. Hydro Impact Basin Ribbon-Cutting Ceremony

    NASA Video Gallery

    August 9, 2011 -- Ribbon-cutting ceremony for the Hydro Impact Basin at NASA's Langley Research Center in Hampton, Va. The HIB expands NASA's capability to test and certify future spacecraft for wa...

  9. Tidal frequency estimation for closed basins

    NASA Technical Reports Server (NTRS)

    Eades, J. B., Jr.

    1978-01-01

    A method was developed for determining the fundamental tidal frequencies for closed basins of water, by means of an eigenvalue analysis. The mathematical model employed, was the Laplace tidal equations.

  10. Pacific Basin Communication Study, volume 2

    NASA Technical Reports Server (NTRS)

    Young, E. L.; Hurd, J. N.

    1981-01-01

    Users' meeting summary report, chronology of visits, economic data for forum countries, techniques used in the study, communication choices, existing resources in the Pacific Basin, and warc 79 region 3 rules and regulations were presented in volume 2.

  11. KE Basin water dispositioning engineering study

    SciTech Connect

    Hunacek, G.S.; Gahir, S.S.

    1994-09-23

    This engineering study is a feasibility study of KE Basin water treatment to an acceptable level and dispositioning the treated water to Columbia River, ground through ETF or to air through evaporation.

  12. BOULDER AREA SUSTAINABILITY INFORMATION NETWORK (BASIN)

    EPA Science Inventory

    The primary goal of the Boulder Area Sustainability Information Network (BASIN) is to help citizens make meaningful connections between environmental data and their day-to-day activities and facilitate involvement in public policy development. Objectives include:

      ...

    • Petroleum potential of the Libyan sedimentary basins

      SciTech Connect

      Hammuda, O.S.; Sbeta, A.M.

      1988-08-01

      Contrary to prevailing opinion, all Libyan sedimentary basins and the Al-Jabal Al-Akhdar platform contain prolific petroleum accumulations with very high prospectivity. A systematic review of the types of traps and pays in this central part of the southern Mediterranean province reveals great variability in reservoir and source rock characteristics. The reservoir rocks are of almost all geologic ages. The thick source rock sequences also vary in nature and organic content. The organic-rich facies have accumulated in intracratonic and passive margin basins or in marginal seas. Most of the oil discovered thus far in these basins is found in large structural traps. Future discoveries of stratigraphic traps or small structural traps will require intensified efforts and detailed studies using up-to-date multidisciplinary techniques in sedimentary tectonics, biostratigraphic facies analysis, and geochemical prospecting in order to develop a better understanding of these basins, thus improving their prospectivity.

    • Tectonic evolution of Abu Gharadig basin

      SciTech Connect

      Meshref, W.M.; Beleity, A.E.H.; Hammouda, H.; Kamel, M.

      1988-08-01

      The Abu Gharadig basin, northwestern desert of Egypt, is considered the most petroliferous basin in the Western Desert as far as hydrocarbon production and potential. The basin is believed to be growing and developing throughout geologic time. Aeromagnteic data and subsurface information, derived from a set of isopach maps from wells including complete sections only, revealed that the Abu Gharadig basin was subjected to different tectonic events that resulted in different tectonic trends. These trends include (1) north-south to north-northwest-south-southeast of Precambrian age, (2) east-west (Y-trends) of Paleozoic to Jurassic age, (3) west-northwest (R-trends) of Late Jurassic to Early Cretaceous, and (4) east-northeast (P-trends) of Late Cretaceous to Eocene age. The previously mentioned tectonic trends can be explained by a convergent wrench model that affected northern Egypt.

    • Appalachian basin bibliography. Topical report, March 1994

      SciTech Connect

      Picciano, L.; Armstrong, T.S.

      1994-03-01

      More than 120 Gas Research Institute reports on gas exploration and production in the Appalachian Basin are listed. They cover geology and reservoir engineering in three gas producing formations: shales, tight gas sands, and coal seams.

    • River Basin Standards Interoperability Pilot

      NASA Astrophysics Data System (ADS)

      Pesquer, Lluís; Masó, Joan; Stasch, Christoph

      2016-04-01

      There is a lot of water information and tools in Europe to be applied in the river basin management but fragmentation and a lack of coordination between countries still exists. The European Commission and the member states have financed several research and innovation projects in support of the Water Framework Directive. Only a few of them are using the recently emerging hydrological standards, such as the OGC WaterML 2.0. WaterInnEU is a Horizon 2020 project focused on creating a marketplace to enhance the exploitation of EU funded ICT models, tools, protocols and policy briefs related to water and to establish suitable conditions for new market opportunities based on these offerings. One of WaterInnEU's main goals is to assess the level of standardization and interoperability of these outcomes as a mechanism to integrate ICT-based tools, incorporate open data platforms and generate a palette of interchangeable components that are able to use the water data emerging from the recently proposed open data sharing processes and data models stimulated by initiatives such as the INSPIRE directive. As part of the standardization and interoperability activities in the project, the authors are designing an experiment (RIBASE, the present work) to demonstrate how current ICT-based tools and water data can work in combination with geospatial web services in the Scheldt river basin. The main structure of this experiment, that is the core of the present work, is composed by the following steps: - Extraction of information from river gauges data in OGC WaterML 2.0 format using SOS services (preferably compliant to the OGC SOS 2.0 Hydrology Profile Best Practice). - Model floods using a WPS 2.0, WaterML 2.0 data and weather forecast models as input. - Evaluation of the applicability of Sensor Notification Services in water emergencies. - Open distribution of the input and output data as OGC web services WaterML, / WCS / WFS and with visualization utilities: WMS. The architecture

    • VIEW TO EAST OF THE NORTH END OF BASIN NO. ...

      Library of Congress Historic Buildings Survey, Historic Engineering Record, Historic Landscapes Survey

      VIEW TO EAST OF THE NORTH END OF BASIN NO. 1 (THE WESTERN-MOST BASIN) SHOWING THE CRANEWAY AND GALLERY BETWEEN BASINS NO. 1 AND 2. BASSWOOD BUOY TENDER AND THREE SMALL VESSELS ARE BERTHED IN BASIN NO. 1. LARGER VESSELS ARE BERTHED IN BASINS TO THE EAST, SEEN IN BACKGROUND - Rosie the Riveter National Historical Park, Graving Docks, Shipyard No. 3, Richmond, Contra Costa County, CA

    • Ordovician chitinozoan zones of Great Basin

      SciTech Connect

      Hutter, T.J.

      1987-08-01

      Within the Basin and Range province of the Great Basin of the western US, Ordovician chitinozoans have been recovered in two major lithic facies; the western eugeosynclinal facies and the eastern miogeosynclinal facies. Chitinozoans recovered from these facies range in age from Arenig to Ashgill. Extensive collections from this area make possible the establishment of chitinozoan faunal interval zones from the Ordovician of this area. Selected species of biostratigraphic value include, in chronostratigraphic order, Lagenochitina ovoidea Benoit and Taugourdeau, 1961, Conochitina langei Combaz and Peniguel, 1972, Conochitinia poumoti Combaz and Penique, Desmochitina cf. nodosa Eisenack, 1931, Conochitina maclartii Combaz and Peniguel, 1972, Conochitina robusta Eisenack, 1959, Angochitina capitallata Eisenack, 1937, Sphaerochitina lepta Jenkins. 1970, and Ancyrochitina merga Jenkins, 1970. In many cases, these zones can be divided into additional sub-zones using chitinozoans and acritarchs. In all cases, these chitinozoan faunal zones are contrasted with established American graptolite zones of the area, as well as correlated with British standard graptolite zones. The composition of these faunas of the western US Great Basin is similar to that of the Marathon region of west Texas and the Basin Ranges of Arizona and New Mexico, to which direct comparisons have been made. There also appears to be a great similarity with the microfaunas and microfloras of the Ordovician of the Canning basin of western Australia. The Ordovician chitinozoan faunal interval zones established for the Basin and Range province of the Great Basin of the western US also appear to be applicable to the Marathon region of west Texas and the Basin Ranges of Arizona and New Mexico.

    • Critically safety evaluation for K Basins sandfilters

      SciTech Connect

      Wittekind, W.D.

      1994-10-01

      Criticality safety for K Basins sandfilters was considered. No credible normal or off-normal scenarios were determined which could compromise criticality safety and result in a K{sub eff} {>=} 0.98. The conclusion is that, due to the physical form and isotopic distribution of the fissionable material, there is no possibility of a nuclear criticality in the sandfilter. For this reason, there is no need for a criticality alarm system for the K Basins sandfilters.

    • Microbiology of spent nuclear fuel storage basins.

      PubMed

      Santo Domingo, J W; Berry, C J; Summer, M; Fliermans, C B

      1998-12-01

      Microbiological studies of spent nuclear fuel storage basins at Savannah River Site (SRS) were performed as a preliminary step to elucidate the potential for microbial-influenced corrosion (MIC) in these facilities. Total direct counts and culturable counts performed during a 2-year period indicated microbial densities of 10(4) to 10(7) cells/ml in water samples and on submerged metal coupons collected from these basins. Bacterial communities present in the basin transformed between 15% and 89% of the compounds present in Biologtrade mark plates. Additionally, the presence of several biocorrosion-relevant microbial groups (i.e., sulfate-reducing bacteria and acid-producing bacteria) was detected with commercially available test kits. Scanning electron microscopy and X-ray spectra analysis of osmium tetroxide-stained coupons demonstrated the development of microbial biofilm communities on some metal coupons submerged for 3 weeks in storage basins. After 12 months, coupons were fully covered by biofilms, with some deterioration of the coupon surface evident at the microscopical level. These results suggest that, despite the oligotrophic and radiological environment of the SRS storage basins and the active water deionization treatments commonly applied to prevent electrochemical corrosion in these facilities, these conditions do not prevent microbial colonization and survival. Such microbial densities and wide diversity of carbon source utilization reflect the ability of the microbial populations to adapt to these environments. The presumptive presence of sulfate-reducing bacteria and acid-producing bacteria and the development of biofilms on submerged coupons indicated that an environment for MIC of metal components in the storage basins may occur. However, to date, there has been no indication or evidence of MIC in the basins. Basin chemistry control and corrosion surveillance programs instituted several years ago have substantially abated all corrosion mechanisms

  1. Paraguay river basin response to seasonal rainfall

    NASA Astrophysics Data System (ADS)

    Krepper, Carlos M.; García, Norberto O.; Jones, Phil D.

    2006-07-01

    The use of river flow as a surrogate to study climatic variability implies the assumption that changes in rainfall are mirrored and likely amplified in streamflow. This is probably not completely true in large basins, particularly those that encompass different climatic regions, like the Paraguay river basin. Not all the signals present in precipitation are reflected in river flow and vice versa. The complex relationship between precipitation and streamflow could filter some signals and introduce new oscillatory modes in the discharge series. In this study the whole basin (1 095 000 km2) was divided into two sub-basins. The upper basin is upstream of the confluence with the River Apa and the lower basin is between the Apa river confluence and the Puerto Bermejo measuring station. The rainfall contribution shows a clear wet season from October to March and a dry season from April to September. A singular spectrum analysis (SSA) shows that there are trends in rainfall contributions over the upper and lower basins. Meanwhile, the lower basin only presents a near-decadal cycle (T 10 years). To determine the flow response to seasonal rainfall contributions, an SSA was applied to seasonal flow discharges at Puerto Bermejo. The seasonal flows, Q(t)O-M and Q(t)A-S, present high significant modes in the low-frequency band, like positive trends. In addition, Q(t)O-M presents a near-decadal mode, but only significant at the 77% level for short window lengths (M ≤ 15 years). Really, the Paraguay river flow is not a good surrogate to study precipitation variation. The low-frequency signals play an important role in the flow behaviour, especially during extreme events from the second half of the last century onwards.

  2. Assessment of undiscovered carboniferous coal-bed gas resources of the Appalachian Basin and Black Warrior Basin Provinces, 2002

    SciTech Connect

    Milici, R.C.; Hatch, J.R.

    2004-09-15

    Coalbed methane (CBM) occurs in coal beds of Mississippian and Pennsylvanian (Carboniferous) age in the Appalachian basin, which extends almost continuously from New York to Alabama. In general, the basin includes three structural subbasins: the Dunkard basin in Pennsylvania, Ohio, and northern West Virginia; the Pocahontas basin in southern West Virginia, eastern Kentucky, and southwestern Virginia; and the Black Warrior basin in Alabama and Mississippi. For assessment purposes, the Appalachian basin was divided into two assessment provinces: the Appalachian Basin Province from New York to Alabama, and the Black Warrior Basin Province in Alabama and Mississippi. By far, most of the coalbed methane produced in the entire Appalachian basin has come from the Black Warrior Basin Province. 8 refs., 1 fig., 1 tab.

  3. Interpretation of magnetic anomalies over the Grenada Basin

    NASA Astrophysics Data System (ADS)

    Bird, Dale E.; Hall, Stuart A.; Casey, John F.; Millegan, Patrick S.

    1993-10-01

    The Grenada Basin is a back arc basin located near the eastern border of the Caribbean Plate. The basin is bounded on the west by the north-south trending Aves Ridge (a remnant island arc) and on the east by the active Lesser Antilles island arc. Although this physiography suggests that east-west extension formed the basin, magnetic anomalies over the basin exhibit predominantly east-west trends. If the observed magnetic anomalies over the basin are produced by seafloor spreading, then the orientation of extension is complex. Extension in back arc basins is roughly normal to the trench, although some basins exhibit oblique extension. Present models for the formation of the Grenada Basin vary from north-south extension through northeast-southwest extension to east-west extension. An interpretation of magnetic anomalies over the Grenada Basin supports basin development by nearly east-west extension. Low amplitude magnetic anomaly trends subparallel to the island arc magnetic anomaly trends over the southern part of the basin and the results of forward three-dimensional (3-D) magnetic modeling are consistent with this conclusion. Late Cenozoic tectonic movements may have been responsible for disrupting the magnetic signature over the northern part of the basin. On the basis of our 3-D analysis, we attribute the prominent east-west trending anomalies of the Grenada Basin to fracture zones formed during seafloor spreading at low latitude. This east-west trend is not interpreted as indicating north-south extension of the basin.

  4. The basins on the Argentine continental margin

    SciTech Connect

    Urien, C.M.

    1996-08-01

    After the stabilization of the central Gondwana Craton, orogenic belts were accreted, as a result of convergence events and an extensive passive margin developed in southwestern Gondwana. Thermal subsidence in Parana, Karoo-Ventania basins and the Late Paleozoic-Early Mesozoic rifts, were modified by the Gondwana breakup and the South Atlantic opening. Early Paleozoic marine transgressions deposited the Table Mountain Group in Ventania. In southwestern Patagonia foreland clastics were deposited. Magmatic arcs and marine units indicate a tectonic trough was formed, alternating with continental sequences, over Late Paleozoic metamorphics and intrusives, resulting from plastered terrains along the Gondwana margin. In Patagonia, Permo-Carboniferous continental and glacio marine clastics infill the basins, while in Ventania, paralic sequences, grade from neritic to continental to the northeast, extending beneath the continental margin. The Triassic-Jurassic rift basins progressed onto regional widespread acid lavas and were infilled by lagoonal organic-rich sequences. Early drift phase built basins transverse to the margin, with fluvio-lacustrine sequences: Salado, Colorado, Valdes-Rawson, San Julian and North Malvinas intracratonic basins, which underwent transtensional faulting. Post-Oxfordian to Neocomian brackish sequences, onlapped the conjugate basins during the margin`s drift, with petroleum systems, as in Austral and Malvinas. In the Valanginian, basic extrusions commenced to form on the continental border, heralding the oceanic phase. Due to thermal subsidence, offlaping sediments prograded onto the remaining half-grabens. Several petroleum systems, proven and hypothetical, are identified in this region.

  5. The thermal environment of Cascadia Basin

    NASA Astrophysics Data System (ADS)

    Johnson, H. Paul; Hautala, Susan L.; Bjorklund, Tor A.

    2012-07-01

    Located adjacent to the NE Pacific convergent boundary, Cascadia Basin has a global impact well beyond its small geographic size. Composed of young oceanic crust formed at the Juan de Fuca Ridge, igneous rocks underlying the basin are partially insulated from cooling of their initial heat of formation by a thick layer of pelagic and turbidite sediments derived from the adjacent North American margin. The igneous seafloor is eventually consumed at the Cascadia subduction zone, where interactions between the approaching oceanic crust and the North American continental margin are partially controlled by the thermal environment. Within Cascadia Basin, basement topographic relief varies dramatically, and sediments have a wide range of thickness and physical properties. This variation produces regional differences in heat flow and basement temperatures for seafloor even of similar age. Previous studies proposed a north-south thermal gradient within Cascadia Basin, with high geothermal flux and crustal temperatures measured in the heavily sedimented northern portion near Vancouver Island and lower than average heat flux and basement temperatures predicted for the central and southern portions of the basin. If confirmed, this prediction has implications for processes associated with the Cascadia subduction zone, including the location of the "locked zone" of the megathrust fault. Although existing archival geophysical data in the central and southern basin are sparse, nonuniformly distributed, and derived from a wide range of historical sources, a substantial N-S geothermal gradient appears to be confirmed by our present compilation of combined water column and heat flow measurements.

  6. K basins sludge removal sludge pretreatment system

    SciTech Connect

    Chang, H.L.

    1997-06-12

    The Spent Nuclear Fuels Program is in the process of planning activities to remove spent nuclear fuel and other materials from the 100-K Basins as a remediation effort for clean closure. The 105 K- East and K-West Basins store spent fuel, sludge, and debris. Sludge has accumulated in the 1 00 K Basins as a result of fuel oxidation and a slight amount of general debris being deposited, by settling, in the basin water. The ultimate intent in removing the sludge and fuel is to eliminate the environmental risk posed by storing fuel at the K Basins. The task for this project is to disposition specific constituents of sludge (metallic fuel) to produce a product stream through a pretreatment process that will meet the requirements, including a final particle size acceptable to the Tank Waste Remediation System (TWRS). The purpose of this task is to develop a preconceptual design package for the K Basin sludge pretreatment system. The process equipment/system is at a preconceptual stage, as shown in sketch ES-SNF-01 , while a more refined process system and material/energy balances are ongoing (all sketches are shown in Appendix C). Thus, the overall process and 0535 associated equipment have been conservatively selected and sized, respectively, to establish the cost basis and equipment layout as shown in sketches ES- SNF-02 through 08.

  7. Bison basin, central Wyoming - geologic overview

    SciTech Connect

    Pinnell, M.L.

    1984-07-01

    The northeastern part of the Great Divide basin is a separate, unique, and until recently, little-explored subbasin sometimes called the Bison basin. It is bounded by the Wind River Mountains, Sweetwater-Granite Mountain foreland uplift, Lost Soldier-Wertz structure, and a little-studied very positive east-west structural arch approximately coincident with the Sweetwater-Fremont county line. A comprehensive seismic, Landsat, and subsurface geologic examination or, better, dissection of the Bison basin was initiated in 1978. Numerous oil and gas prospects were delineated by this study. Since this small, 12 by 40 mi (19 by 64 km) basin is bordered by known reserves of 260 million bbl of oil and 90 million bcf of gas, these prospects proved to be a popular target of the drill bit. At least one of these prospects appears to be productive; others are currently being drilled. The presence of major east-west wrench faults, a well-documented foreland uplift, until recently undrilled surface and subsurface structures, faults with throw measured in tens of thousands of feet, and an oil seep indicate possible additional hydrocarbon potential in the Bison basin that could exceed presently known reserves. Currently drilling wells and abundant already acquired reflection seismic data are the beginning step in an ongoing exploration program of an interesting, complex, and rewarding small basin with a lot of promise.

  8. Deep basin gas - fact or fiction

    SciTech Connect

    Sandmeyer, D.J.

    1980-01-01

    The geology of the Deep basin is complex. Prior to 1976 the region had been explored sporadically primarily to investigate the potential in the deeper rocks with little expectation that the shallower zones would be productive. These shallower zones of relatively low quality reservoir rocks are the source of the current interest in the Deep basin. Today, estimates of natural gas resource potential of the Deep basin range up to 440 TCF. Prior to the discovery of gas in the Deep basin, proved accumulations of gas in place in Alberta and6 British Columbia were 145 tcf and 18 tcf, respectively. The potential of the Deep basin must be viewed as significant in Canada's future energy planning. However, estimating resource potential and proving the existence of recoverable gas which can be marketed, are distinctly different problems. It is a fact that a large gas resource potential has been discovered in the Deep basin, but there is some risk that any currently discussed estimate of recoverable gas volumes will be viewed as fiction in the future.

  9. Hydrological Modelling of Ganga River basin.

    NASA Astrophysics Data System (ADS)

    Anand, J.; Gosain, A. K.; Khosa, R.

    2015-12-01

    Application of a hydrological model, Soil and Water Assessment Tool (SWAT) to the Ganga basin having a total drainage area of around 1.08 M sq. km extending over Tibet, Nepal, India and Bangladesh has been made. The model is calibrated to determine the spatial deviations in runoff at sub-basin level, and to capture the water balance of the river basin. Manual calibration approach was used for calibrating the SWAT model by following multi-step procedure to get to the realistic present situation as close as possible. Simulations were then further made with and without proposed future projects to obtain various scenarios. The various statistical parameters used for the evaluation of the monthly runoff simulation showed that SWAT performed well in mimicking the monthly stream flow for Ganga River basin. The model under predicted the flows in the non-perennial region during non-monsoon season, due to low rainfall and regulated flows and seepage taking place from the reservoirs. The impacts of the interventions, both existing as well as proposed, on the water balance of the basin were evaluated and quantified. The derived results suggest that there is a substantial reduction in overall water resources availability in the study basin on account of the current level of development and further, future developments, as are being proposed, may require a careful study of their potential impact on currently sanctioned water use. The present study showcases that efficacy of the model for simulating the stream flow is admirable.

  10. Lunar basin formation and highland stratigraphy

    NASA Technical Reports Server (NTRS)

    Howard, K. A.; Wilhelms, D. E.; Scott, D. H.

    1974-01-01

    Multiring impact basins, formed after solidification of the lunar crust, account for most or all premare regional deposits and structures expressed in the lunar landscape and for major topographic and gravity variations. A fresh basin has two or more concentric mountain rings, a lineated ejecta blanket, and secondary impact craters. Crackled material on the floor may be impact melt. The ejecta blanket was emplaced at least partly as a ground-hugging flow and was probably hot. A suggested model of basin formation is that the center lifts up and the rings form by inward collapse during evisceration. The resulting basin is shallow and has a central uplift of the mantle. This results in a central gravity high and a ring low. Later flooding by mare basalt has since modified most near side basins. Highland deposits of plains, furrowed and pitted terrain, and various hills, domes, and craters that were interpreted before the Apollo missions as being volcanic can now be interpreted as being basin related.

  11. Thermal evolution of the Newark basin

    SciTech Connect

    Huntoon, J.E. ); Furlong, K.P. )

    1992-09-01

    A one-dimensional conductive thermal model is used to calculate the transient thermal history of the Newark basin, a Triassic-Jurassic continental rift basin in the eastern United States that formed during the separation of North America and Africa. The model accounts for deposition, erosion, igneous activity, lithology-dependent variations in thermal conductivity, depth-dependent radiogenic heat production, and changes in heat flow through time. A burial and erosion history for the Newark basin is constructed for the modeling, including changes in heat flow through time, emplacement of Jurassic lava flows at the surface, and emplacement of the Palisades still at depth. Vitrinite-reflectance values and apatite and zircon fission-track ages, for units of both Triassic and Jurassic age, are used to constrain the models. Use of two different data sets greatly limits the number and types of models that can reproduce the observed data. Modeling results indicate that initial formation of the Newark basin is not coincident in time with a thermal event. Elevated heat flow (on the order of 130 mW/m[sup 2] in the models) did affect the basin during its evolution, however, and was associated with igneous activity (at approximately 201-199.5 Ma in the models). Results of the modeling also indicate that the original sedimentary package in the Newark basin was approximately 2.5 km thicker than today.

  12. The East Falcon Basin: Its Caribbean roots

    SciTech Connect

    Bartok, P.; Boesi, T.

    1996-08-01

    The East Falcon Basin has been described persistently in the context of the Maracaibo Basin tectonic framework. It is the objective of the present study to demonstrate that the Falcon Basin is, in effect, a Caribbean basin juxtaposed on South America and affected by Caribbean tectonics. The oldest rocks outcropping in the region are Late Paleozoic metamorphic and igneous rocks rafted from northcentral Colombia, Middle Jurassic ophiolite complexes, sediments and metasediments and Cretaceous ophiolites transported by a melange of late Cretaceous to early Tertiary sediments. The south vergence of the Caribbean Nappe province has been documented and extends to the present limit of the Andean uplift and to the southern limit of the Coastal Range. The migrating foredeep that developed during the Paleocene-Eocene deposited dominantly basinal shales and thin sandstones. During the Oligocene the Caribbean faults of the Oca system and conjugates began with a dominantly transtensional regime becoming progressively transpressional by Miocene time. The facies development of the Oligocene-Miocene documents the tectonic history. Unique blocks remained as resistant blocks creating ramparts and modifying the basin configuration. During transpression northward-verging thrusting progressively migrated towards the present coastline. The most evident structures of the region are Caribbean in affinity and combined with the sedimentary history of the region can serve to unravel the complex Caribbean-South American plate interaction.

  13. Seismic stratigraphy or Cape Sorell Basin, Tasmania

    SciTech Connect

    Bellow, T.L.

    1990-05-01

    Because large new exploration areas have become scarce, the Cape Sorell basin has become an increasingly attractive frontier area. Cape Sorell basin, located along the western passive continental margin of Tasmania formed as a result of the breakup of eastern Gondwanaland 95{plus minus}5 Ma. An extensional fault system trending west-northwest with dip-slip movement down to the south-southwest forms the northern boundary and a second fault system trending north-northwest with oblique slip down to the south-southwest creates the basin. Second order extensional faults within the basin have created wrench-type flower structures, which are potential migration pathways for hydrocarbons. Nine distinct depositional sequences identified within the Cape Sorell basin record the evolution of this passive continental margin. Late Cretaceous-early Paleocene sequences were deposited as the rifting ceased and clastic progradation over the rift terrain began. Relative lowering of sea level occurred during the Paleocene, resulting in extensive channeling of the Late Cretaceous-early Paleocene sequences. A subsequent rise in relative sea level resulted in canyon-fill deposition during the early Paleocene to early Eocene. During the Eocene, sedimentation sufficiently increased to produce a downlapping sediment progradation characterized by deltaic depositional environment. Although interrupted several times by changes in relative sea level and shifting sediment sources, deltaic deposition continued until the late Oligocene. As the rate of clastic sedimentation slowed, carbonate shelf deposition began and has typified the basin since late the Oligocene.

  14. Mesozoic evolution of the Amu Darya basin

    NASA Astrophysics Data System (ADS)

    Brunet, Marie-Françoise; Ershov, Andrey; Korotaev, Maxim; Mordvintsev, Dmitriy; Barrier, Eric; Sidorova, Irina

    2014-05-01

    This study, granted by the Darius Programme, aims at proposing a model of tectono-stratigraphic evolution of the Amu Darya basin since the Late Palaeozoic and to understand the relationship with the nearby basins. The Amu Darya basin, as its close eastern neighbour, the Afghan-Tajik basin, lies on the Turan platform, after the closure of the Turkestan Ocean during the Late Paleozoic. These two basins, spread on mainly lowlands of Turkmenistan, southwest Uzbekistan, Tajikistan, and northern Afghanistan, are separated from one another by the South-Western Gissar meganticline, where series of the northern Amu Darya margin are outcropping. The evolution is closely controlled by several periods of crustal thinning (post-collision rifting and back-arc extension), with some marine incursions, coming in between accretions of continental blocks and collisions that succeeded from the Late Triassic-Early Jurassic (Eo-Cimmerian orogeny) to the Cenozoic times. These orogenies controlled the deposition of thick clastics sequences, and the collision of the Indian Plate with Eurasia strongly deformed the sedimentary cover of the Afghan-Tajik basin. The more than 7 km thick Meso-Cenozoic sedimentary succession of the Amu Darya basin, lies on a complex system of rifts and blocks. Their orientation and age (late Permian, Triassic?) are not well known because of deep burial. The north-eastern margin, with the Bukhara (upper margin) and Chardzhou steps, is NW oriented, parallel to the Paleozoic Turkestan suture. The orientation bends to W-E, in the part of the Gissar situated to the North of the Afghan-Tajik basin. This EW trending orientation prevails also in the south(-eastern) margin of the basin (series of North Afghanistan highs) and in the Murgab depression, the south-eastern deepest portion of the Amu Darya basin. It is in this area and in the eastern part of the Amu Darya basin that the Jurassic as well as the lower Cretaceous sediments are the thickest. The south-western part

  15. Estimating tectonic history through basin simulation-enhanced seismic inversion: Geoinformatics for sedimentary basins

    USGS Publications Warehouse

    Tandon, K.; Tuncay, K.; Hubbard, K.; Comer, J.; Ortoleva, P.

    2004-01-01

    A data assimilation approach is demonstrated whereby seismic inversion is both automated and enhanced using a comprehensive numerical sedimentary basin simulator to study the physics and chemistry of sedimentary basin processes in response to geothermal gradient in much greater detail than previously attempted. The approach not only reduces costs by integrating the basin analysis and seismic inversion activities to understand the sedimentary basin evolution with respect to geodynamic parameters-but the technique also has the potential for serving as a geoinfomatics platform for understanding various physical and chemical processes operating at different scales within a sedimentary basin. Tectonic history has a first-order effect on the physical and chemical processes that govern the evolution of sedimentary basins. We demonstrate how such tectonic parameters may be estimated by minimizing the difference between observed seismic reflection data and synthetic ones constructed from the output of a reaction, transport, mechanical (RTM) basin model. We demonstrate the method by reconstructing the geothermal gradient. As thermal history strongly affects the rate of RTM processes operating in a sedimentary basin, variations in geothermal gradient history alter the present-day fluid pressure, effective stress, porosity, fracture statistics and hydrocarbon distribution. All these properties, in turn, affect the mechanical wave velocity and sediment density profiles for a sedimentary basin. The present-day state of the sedimentary basin is imaged by reflection seismology data to a high degree of resolution, but it does not give any indication of the processes that contributed to the evolution of the basin or causes for heterogeneities within the basin that are being imaged. Using texture and fluid properties predicted by our Basin RTM simulator, we generate synthetic seismograms. Linear correlation using power spectra as an error measure and an efficient quadratic

  16. Marcelina formation study - Maracaibo basin

    SciTech Connect

    D`Arlach, C.; Peralta, J.; Murillo, R.

    1996-08-01

    Recent development activity onshore, west of the Maracaibo Lake, has led to a better understanding of the Paleocene Marcelina formation in the basin. The Marcelina formation is divided into two sections, an upper coal dominated interval and a lower sand/claystone interval. The sandstone reservoir section consists of a number of fining upward sequences deposited in a fluvial environment. Laterally the section evolves to a shallow marine shaly and carbonatic section, or is truncated by a regional unconformity, being missing over much of the Lake area. The Marcelina sands are only commercially productive in the Alturitas Field, where oil is found in a combined stratigraphic/structural trap. This paper focuses on two aspects of the Marcelina. First, the study incorporates the field data into a regional framework to investigate the possibility of similar plays in the studied area. Second, the study integrates geology and engineering data to examine the Marcelina as a reservoir unit to optimize field development and increase the oil recovery efficiency. Information from seismic, logs, cores, reservoir pressures, and fluids is used to understand the depositional model and the field complexity. The study provides a model, supported by extensive data, which may help to develop other potential discoveries in the west coast area.

  17. On Restoring Sedimentary Basins for Post-Depositional Deformation - Paleozoic Basins of the Central Andes

    NASA Astrophysics Data System (ADS)

    Bahlburg, H.

    2015-12-01

    The reconstruction and interpretation of sedimentary basins incorporated into folded and thrusted mountain belts is strongly limited by the style and intensity of shortening. This problem is exacerbated if deformation is polyphasic as is the case for the Paleozoic basins in the central Andes. Some of these have been deformed by folding and thrusting during at least 3 events in the Late Ordovician, the Late Paleozoic and Cenozoic. A realistic reconstruction of the original basin dimensions and geometries from outcrops and maps appears to be almost impossible. We present results of a stepwise reconstruction of the Paleozoic basins of the central Andes by restoring basin areas and fills accounting for crustal shortening. The structurally most prominent feature of the central Andes is the Bolivian Orocline which accomodated shortening in the last 45 Ma on the order of between 300 and 500 km. In a first step basins were restored by accounting for Cenozoic rotation and shortening by deconvolving the basins using an enhanced version of the oroclinal bending model of Ariagada et al. (2008). Results were then restored stepwise for older deformation. Constraints on these subsequent steps are significantly poorer as values of shortening can be derived only from folds and thusts apparent in outcrops. The amount of shortening accomodated on unexposed and therefore unknown thrusts can not be quantified and is a significant source of error very likely leading to an underestimation of the amount of shortening. Accepting these limitations, basin restoration results in an increase in basin area by ≥100%. The volumes of stratigraphically controlled basin fills can now be redistributed over the wider, restored area, translating into smaller rates of accumulation and hence required subsidence. The restored rates conform to those of equivalent modern basin settings and permit a more realistic and actualistic analysis of subsidence drivers and the respective tectonic framework.

  18. Active transtensional intracontinental basins: Walker Lane in the western Great Basin

    USGS Publications Warehouse

    Jayko, Angela S.; Bursik, Marcus

    2012-01-01

    The geometry and dimensions of sedimentary basins within the Walker Lane are a result of Plio-Pleistocene transtensive deformation and partial detachment of the Sierra Nevada crustal block from the North American plate. Distinct morpho-tectonic domains lie within this active transtensive zone. The northeast end of the Walker Lane is partly buried by active volcanism of the southern Cascades, and adjacent basins are filled or poorly developed. To the south, the basin sizes are moderate, 25–45km × 15–10 km, with narrow 8-12km wide mountain ranges mainly oriented N-S to NNE. These basins form subparallel arrays in discrete zones trending about 300° and have documented clockwise rotation. This is succeeded to the south by a releasing stepover domain ∼85-100km wide, where the basins are elongated E-W to ENE, small (∼15-30km long, 5-15km wide), and locally occupied by active volcanic centers. The southernmost part of the Walker Lane is structurally integrated, with high to extreme relief. Adjacent basins are elongate, 50-200km long and ∼5 -20km wide. Variations in transtensive basin orientations in the Walker Lane are largely attributable to variations in strain partitioning. Large basins in the Walker Lane have 2-6km displacement across basin bounding faults with up to 3 km of clastic accumulation based on gravity and drill hole data. The sedimentary deposits of the basins may include interbedded volcanic deposits with bimodal basaltic and rhyolitic associations. The basins may include lacustrine deposits that record a wide range of water chemistry from cold fresh water conditions to saline-evaporative

  19. Simulation of streamflow in small drainage basins in the southern Yampa River basin, Colorado

    USGS Publications Warehouse

    Parker, R.S.; Norris, J.M.

    1989-01-01

    Coal mining operations in northwestern Colorado commonly are located in areas that have minimal available water-resource information. Drainage-basin models can be a method for extending water-resource information to include periods for which there are no records or to transfer the information to areas that have no streamflow-gaging stations. To evaluate the magnitude and variability of the components of the water balance in the small drainage basins monitored, and to provide some method for transfer of hydrologic data, the U.S. Geological Survey 's Precipitation-Runoff Modeling System was used for small drainage basins in the southern Yampa River basin to simulate daily mean streamflow using daily precipitation and air-temperature data. The study area was divided into three hydrologic regions, and in each of these regions, three drainage basins were monitored. Two of the drainage basins in each region were used to calibrate the Precipitation-Runoff Modeling System. The model was not calibrated for the third drainage basin in each region; instead, parameter values were transferred from the model that was calibrated for the two drainage basins. For all of the drainage basins except one, period of record used for calibration and verification included water years 1976-81. Simulated annual volumes of streamflow for drainage basins used in calibration compared well with observed values; individual hydrographs indicated timing differences between the observed and simulated daily mean streamflow. Observed and simulated annual average streamflows compared well for the periods of record, but values of simulated high and low streamflows were different than observed values. Similar results were obtained when calibrated model parameter values were transferred to drainage basins that were uncalibrated. (USGS)

  20. Thrace basin: An extensional Tertiary sedimentary basin in an area of major plate convergences, northwest Turkey

    SciTech Connect

    Turgut, S.; Atalik, E.

    1988-08-01

    The Thrace basin forms one of the largest Tertiary basins in Turkey. Paleontological and sedimentological evidence suggests sedimentation and basin formation commenced by a major transgression from the southwest in the middle to late middle Eocene. The basin formed over an extremely deformed crustal block. It straddles an Upper Cretaceous suture zone which later became a major mobile belt in Turkey. Syndepositional fault patterns and sedimentary thickness indicate the basin was evolved tectonically by north-south extension. Large listric normal faults and east-west depositional axis are evidence of this extension. Early marine sedimentation in the basin was accompanied by an intense volcanism which poured large quantities of ash into the depositional environment. Normal basement faults were active and great thicknesses of clastic sediments accumulated along faults. Reefal to shallow marine carbonates were deposited on shelves and over intrabasinal paleohighs. Sedimentation became regressive in the early Oligocene. Alternation of marine and nonmarine clastic deposition continued without interruption until the end of the Oligocene. By the late Oligocene to early Miocene, the whole basin was subjected to intense tectonism that caused uplift and faulting. Seismic reflection profiles reveal a very complex tectonic style in the basin. Fault-related inversion and flowage structures involving shale diapirism are quite common. Eocene and Oligocene shales are mature enough to generate economical quantities of hydrocarbons. Their source quality is fair to poor. Sand bodies in the Eocene-Oligocene series and reefal carbonates form the reservoir facies, and they are targets for exploration.

  1. The Deep Structure of Lunar Basins: Clues to the Understanding of Basin Formation and Modification

    NASA Technical Reports Server (NTRS)

    Bratt, S. R.; Solomon, S. C.; Head, J. W.; Thurber, C. H.

    1985-01-01

    Basin excavation has played a major role in shaping the surface and subsurface of the Moon. Though photogeologic observations provide estimates for the present volumes of lunar impact basins and their ejecta deposits, there is not sufficient information to describe completely either the geometry of the basins at the time of impact or their modification with time. Determination of the structure of the crust and upper mantle beneath large basins can provide important insight into the thermal and mechanical processes associated with basin formation and modification as well as the differences in these processes as functions of basin age and size. Using observed gravity and topography together with the seismically determined crustal thickness of the central nearside, a model for the structure of the crust and upper mantle of the nearside of the Moon is presented. With this model the deep structure of the largest lunar basins are compared. The implications for the processes of basin formation and modification at different stages in lunar history are explored.

  2. Implication of drainage basin parameters of a tropical river basin of South India

    NASA Astrophysics Data System (ADS)

    Babu, K. J.; Sreekumar, S.; Aslam, Arish

    2016-03-01

    Drainage morphometry provides quantitative description of the drainage system which is an important aspect of the characterisation of watersheds. Chalakudi River is one of the important rivers of the South India which has attracted attention of many environmental scientists recently because of the proposed Athirapally Hydel Project across the river. SRTM (Shuttle Radar Topographic Mission) data were used for preparing DEM (Digital Elevation Model), Aspect Map and Slope Map. Geographical Information System (GIS) was used for the evaluation of linear, areal and relief aspects of morphometric parameters. The study reveals that the terrain exhibits dentritic and trellis pattern of drainage. The Chalakudi River Basin has a total area of 1,448.73 km2 and is designated as seventh-order basin. The drainage density of the basin is estimated as 2.54 and the lower-order streams mostly dominate the basin. The high basin relief indicates high runoff and sediment transport. The elongation ratio of the Chalakudi Basin is estimated as 0.48 and indicates that the shape of the basin is elongated. The development of stream segments in the basin area is more or less effected by rainfall. Relief ratio indicates that the discharge capability of watershed is very high and the groundwater potential is meagre. The low value of drainage density in spite of mountainous relief indicates that the area is covered by dense vegetation and resistant rocks permeated by fractures and joints. These studies are helpful in watershed development planning and wise utilization of natural resources.

  3. Tularosa Basin Play Fairway Analysis: Partial Basin and Range Heat and Zones of Critical Stress Maps

    SciTech Connect

    Adam Brandt

    2015-11-15

    Interpolated maps of heat flow, temperature gradient, and quartz geothermometers are included as TIF files. Zones of critical stress map is also included as a TIF file. The zones are given a 5km diameter buffer. The study area is only a part of the Basin and Range, but it does includes the Tularosa Basin.

  4. Hydrocarbon systems in the East Texas basin: A basin modeling approach

    SciTech Connect

    Wescott, W.A.; Hood, W.C. )

    1993-09-01

    The East Texas basin is a prolific mature hydrocarbon province, producing oil and gas from several reservoirs and a variety of trap types. Much of the liquid hydrocarbons discovered in the basin are trapped in structures related to movement of the underlying Louann Salt. By determining the structural evolution of the basin, a framework was constructed to model the generation of hydrocarbons in the basin. Geochemical data indicate three major source horizons: the Smackover formation (Jurassic oil), shales in the Pearsal Group (Lower Cretaceous oil), and the Eagleford shale (Upper Cretaceous oil). The Jurassic source is mature throughout the basin and began to expel oil approximately 88 Ma. The distribution of Jurassic oil in Cretaceous reservoirs shows that vertical migration routes predominated. Lower Cretaceous source rocks are mature only in the deep, central part of the basin where expulsion began around 47 Ma Distribution of this oil type suggests that Lower Cretaceous source rocks occur only in localized areas of the East Texas basin. The Eagleford shale is immature in the main part of the basin, but it is mature south of the Angelina-Caldwell flexure, where is reached peak generation approximately 20 Ma. Lateral migration explains the distribution of this oil. Migration routes to the giant East Texas field may be 60 mi or more.

  5. Lunar Pyroclastic Eruptions: Basin Volcanism's Dying Gasps

    NASA Astrophysics Data System (ADS)

    Kramer, G. Y.; Nahm, A.; McGovern, P. J.; Kring, D. A.

    2011-12-01

    The relationship between mare volcanism and impact basins has long been recognized, although the degree of influence basin formation has on volcanism remains a point of contention. For example, did melting of magma sources result from thermal energy imparted by a basin-forming event? Did basin impacts initiate mantle overturn of the unstable LMO cumulate pile, causing dense ilmenite to sink and drag radioactive KREEPy material to provide the thermal energy to initiate melting of the mare sources? Did the dramatically altered stress states provide pathways ideally suited for magma ascent? The chemistry of sampled lunar volcanic glasses indicates that they experienced very little fractional crystallization during their ascent to the surface - they have pristine melt compositions. Volatile abundances, including recent measurements of OH [1,2] suggest that the mantle source of at least the OH-analyzed glasses have a water abundance of ~700 ppm - comparable to that of Earth's upper mantle. More recently, [3] showed that the abundance of OH and other volatiles measured in these glasses is positively correlated with trace element abundances, which is expected since water is incompatible in a magma. Volatile enrichment in a deep mantle source would lower the melting temperature and provide the thrust for magma ascent through 500 km of mantle and crust [4]. We are exploring the idea that such basin-related lunar pyroclastic volcanism may represent the last phase of basaltic volcanism in a given region. Remote sensing studies have shown volcanic glasses are fairly common, and often found along the perimeter of mare-filled basins [5]. Recent modeling of the stresses related to the basin-forming process [6,7] show that basin margins provide the ideal conduit for low-volume lunar pyroclastic volcanism (compared with the high output of mare volcanism). Schrödinger's basin floor is largely composed of a compositionally uniform impact breccia. The exceptions are two distinct and

  6. A chrono-tectonostratigraphic framework for the Sydney Basin

    NASA Astrophysics Data System (ADS)

    Mohammad, O. A.; Jones, B. G.; Fergusson, C. L.

    2013-12-01

    The Sydney Basin is a foreland basin forming the southern part of the Bowen-Gunnedah-Sydney Basin system in Eastern Australia. Tectonically the Sydney Basin is regarded as a retro-arc foreland basin that developed through Late Carboniferous to Middle Triassic. Constructing a tectonstratigraphic framework for the basin is difficult due to the complex stratigraphy and poor age control, along with its complex tectonic history. A chrono-tectonostratigraphic framework for the Sydney Basin is presented based on literature synthesis combined with new data analysis. The chrono-tectonostratigraphic framework will provide an up-to-date and easy to follow detailed basin history which can be utilize in the exploration for conventional and unconventional resources in the Sydney Basin.

  7. Precambrian shield and basement tectonics in sedimentary basin analysis

    SciTech Connect

    Touborg, J.F.

    1984-04-01

    This study focused on the use of (1) regional structural analysis of basement and Precambrian rocks surrounding a sedimentary basin, and (2) tracing basement structures into the sedimentary basin. The structural analysis of the Precambrian shield has a fundamental bearing on interpretation of overlying sedimentary cover rocks. This is expressed in the southern part of the Hudson's Bay basin and its southeastern arm, the Moose River basin. For instance, the rims of both basins are controlled by faults or graben structures. Approximately 13 major fault systems with strike lengths of 200-300 km (125-186 mi) or more can be traced from the exposed Precambrian shield into the basin in terms of lineament arrays and/or aeromagnetic and/or gravity signature. The data suggest reactivation of faults during basin sedimentation. This type of basement structural analysis in areas adjacent to sedimentary basins can provide a valuable interpretation base for subsequent seismic surveys and basin evaluation.

  8. Perspective of gas exploration in Ying-Qiong Basin

    SciTech Connect

    He, Hanyi; Zhongtiang Hu )

    1996-01-01

    The Yinggehai and Qiongdongnan Basin (Ying-Qiong Basin) in the northwest part of the South China Sea is a Cenozoic sedimentary basin, which has fast-subsiding and thick sediments. The maximum Cenozoic sediments in the center part of the basin is 20,000 m. Six sets of source rocks with prevailing Type III kerogen were developed in the basin, which has a great potential for gas generation. Different types of reservoirs and traps, leading to different assemblages of source rocks, reservoirs, and cap rocks, form good gas pools. Abnormal high temperature and high pressure in the basin resulted in many mud diapirs and made the generation, migration, and accumulation of gas more colorful. Up to now, four gas fields have been discovered in the basin. A large number of anticlines and stratigraphic-lithologic traps in the basin provide an extensive area for gas exploration. The perspective of gas exploration in the basin is vast and bright.

  9. Perspective of gas exploration in Ying-Qiong Basin

    SciTech Connect

    He, Hanyi; Zhongtiang Hu

    1996-12-31

    The Yinggehai and Qiongdongnan Basin (Ying-Qiong Basin) in the northwest part of the South China Sea is a Cenozoic sedimentary basin, which has fast-subsiding and thick sediments. The maximum Cenozoic sediments in the center part of the basin is 20,000 m. Six sets of source rocks with prevailing Type III kerogen were developed in the basin, which has a great potential for gas generation. Different types of reservoirs and traps, leading to different assemblages of source rocks, reservoirs, and cap rocks, form good gas pools. Abnormal high temperature and high pressure in the basin resulted in many mud diapirs and made the generation, migration, and accumulation of gas more colorful. Up to now, four gas fields have been discovered in the basin. A large number of anticlines and stratigraphic-lithologic traps in the basin provide an extensive area for gas exploration. The perspective of gas exploration in the basin is vast and bright.

  10. Petroleum geology of principal sedimentary basins in eastern China

    SciTech Connect

    Lee, K.Y.

    1986-05-01

    The principal petroliferous basins in eastern China are the Songliao, Ordos, and Sichuan basins of Mesozoic age, and the North China, Jianghan, Nanxiang, and Subei basins of Cenozoic age. These basins contain mostly continental fluvial and lacustrine detrital sediments. Four different geologic ages are responsible for the oil and gas in this region: (1) Mesozoic in the Songliao, Ordos, and Sichuan basins; (2) Tertiary in the North China, Jianghan, Nanxiang, and Subei basins; (3) Permian-Carboniferous in the southern North China basin and the northwestern Ordos basin; and (4) Sinian in the southern Sichuan basin. The most prolific oil and gas sources are the Mesozoic of the Songliao basin and the Tertiary of the North China basin. Although the major source rocks in these basins are lacustrine mudstone and shale, their tectonic settings and the resultant temperature gradients differ. For example, in the Songliao, North China, and associated basins, trapping conditions commonly are associated with block faulting of an extensional tectonic regime; the extensional tectonics in turn contribute to a high geothermal gradient (40/sup 0/-60/sup 0/C/km), which results in early maturation and migration for relatively shallow deposits. However, the Ordos and Sichuan basins formed under compressional conditions and are cooler. Hence, maturation and migration occurred late, relative to reservoir deposition and burial, the result being a poorer quality reservoir.

  11. Paleogene Rift Basins along East China Sea: Tectonic Evolution of Penghu Basin

    NASA Astrophysics Data System (ADS)

    Yang, Tzu-Ruei; Yang, Kenn-Ming; Kuo, Yong-Chein; Lee, Chang-Ji

    2013-04-01

    Prior to the orogeny, Taiwan is located at the passive continental margin. Two extensional events in Tertiary resulted in Paleogene and Neogene basins. The Paleogene rift basins along East China Sea and Taiwan Straight - Tungyintao, Nanjihtao, Penghu basins, from north to south, respectively, comprise a left-lateral and en echelon array rift system. Previous wellbore data revealed that these basins are filled with Paleocene and Eocence sediments, which were controlled by the NE-SW trending growth normal faults. Moreover, Penghu basin is composed of two sub-basins separated by lateral fault which induced a regional volcanic uplift. The seismic profiles indicate that it represents a typical half-graben basin with wedge-shaped synrift deposits thickening toward the main boundary fault. Five wells in the Penghu basin show that Penghu basin began to form during the Late Pliocene with shallow marine deposition. The mid-Eocene shale sequences in northwestern side are interbedded with some layers of basic lava flow, which indicate that the normal faults induced the volcanism. Data used in this study consist of: (1) multi-channel seismic data, (2) seven wellbore data acquired by CPC, Taiwan (Chinese Petroleum Corporation, Taiwan). Seismic profiles were interpreted by Kingdom Suite. Afterwards, integrate synthetic seismogram to generate depth-converted profiles, and import them to 2Dmove for cross-section restoration. Three regional unconformities and four sequence units are delineated in this area. Seismic profile interpretations also infer that the main faults dominantly oriented NE-SW, and the formation of Penghu basin is mostly due to the normal fault in the southeastern side, which is NE-SW trending in the north, and gradually changes to nearly E-W trending. These normal faults are separated by some lateral faults. Restoration of representive cross sections suggest three phases of basin development in the Penghu basin. Regarding to the stratigraphy framework according

  12. Kandik basin stratigraphy, sedimentology, and structure

    SciTech Connect

    Wiley, T.J.; Howell, D.G.; Kauffman-Linam, L.; Boundy-Sanders, S.; Murray, R.W.; Jones, D.L.

    1987-05-01

    East-central Alaska's Kandik basin is a structural remnant of a larger Permian to Cretaceous basin. Permian shallow-water Tahkandit Limestone and Step Conglomerate at the base of the sequence rest unconformably on Paleozoic chert-pebble conglomerate, siliceous shale, and limestone. These Permian rocks are overlain by Triassic to Lower Cretaceous open-ocean Glenn Shale, which grades upward into Lower Cretaceous (Valanginian) hummocky cross-bedded (outer shelf to upper slope) Keenan Quartzite. The quartzite grades upward into fine-grained north-northeast-flowing turbidites of the Biederman Argillite (undated). East-northeast-flowing pebbly turbidites of the Kathul Graywacke (undated) overlie Biederman strata. Locally, Cretaceous (Albian and younger) through Paleogene nonmarine rocks unconformably overlie the Kandik basin sequence. The Mesozoic part of the sequence is similar to that of Manley basin, northwest Yukon Territory, and much of the North Slope. East-directed flow for Kandik basin strata may require paleogeographic reconstructions involving local to large-scale palinspastic rotations or a western source of chert detritus. Deformation of the Mesozoic sequence in Kandik basin west of the US-Canada border shows northwest-southeast shortening. Shaly units are tightly folded with well-developed cleavage striking northeast. Strikes of beds swing from northeast to east in the extreme southwestern part of the basin, suggesting clockwise rotation. Thrust faults, reverse faults, and fold axes trend east to northeast; normal faults trend northwest. These relations are all consistent with, and probably are closely related to, right slip on the west-northwest-trending Tintina fault.

  13. Hydrogeology of the West Siberian Basin

    SciTech Connect

    Foley, M.G.; Bradley, D.J.; Cole, C.R.

    1996-08-01

    Nuclear fuel cycle activities of the former Soviet Union (FSU) have resulted in extensive radioactive contaminant releases to the environment in western Siberia. We are developing three-dimensional numerical models of the hydrogeology and potential contaminant migration in the West Siberian Basin. We have assumed that ground-water flow in the West Siberian Basin is topographically driven, with recharge to the basin occurring in the highlands on the west, east, and south, and internal discharge localized in numerous river valleys and lakes that ultimately discharge north to the ocean. We are modeling the regional hydrogeology as three-dimensional, steady-state, saturated flow that is recharged from above. We acquired topographic, geologic, hydrostratigraphic, hydrogeologic, and water-balance data for the West Siberian Basin and constructed a regional water table. We correlated and combined 70 different rock types derived from published descriptions of West Siberian Basin rocks into 17 rock types appropriate for assignment of hydrogeologic properties on the basis of spatial heterogeneity and constituent (i.e., sand, silt, and clay) diversity. Examination of resulting three-dimensional assemblages of rock types showed that they were consistent with published and inferred paleogeography and depositional processes. Calibrating the basin`s moisture balance (i.e., recharge and discharge) to the derived water table determined plausible input parameter values for unknowns such as hydraulic conductivities. The general directions of calculated ground-water flow suggest that major rivers act as discharge areas, with upwelling below the rivers extending down into the basement rocks, and that ground-water divides that penetrate the entire thickness of the model are evident between major rivers.

  14. Basin modeling of the Parang (Socotra) Basin, northern East China Sea shelf: Implications for hydrocarbon potential

    NASA Astrophysics Data System (ADS)

    Kim, H.; Moon, S.; Lee, G.; Yoon, Y.; Kim, H.

    2013-12-01

    The hydrocarbon potential of the Parang (Socotra) Basin in the northern East China Sea shelf has remained poorly understood. We performed one-dimensional basin modeling for a dummy well located in the depocenter of the northern part of the Parang Basin to investigate the timings of hydrocarbon generation and expulsion. First, a depth-converted seismic profile crossing the dummy well was restored by backstripping and decompaction for eight regional and subregional unconformities, including the top of the acoustic basement, to reconstruct the subsidence history and to determine the timing of trap formation. The basin modeling, assuming rifting heat-flow model and source rocks with type III kerogen, suggests that the main phase of hydrocarbon (mostly gas) expulsion peaked in the Late Eocene, predating the inversion that created traps in the early Middle to latest Middle Eocene. Thus, the potential for large hydrocarbon accumulations in the northern Parang Basin is probably limited.

  15. Chicxulub impact basin: Gravity characteristics and implications for basin morphology and deep structure

    NASA Technical Reports Server (NTRS)

    Sharpton, Virgil L.; Burke, Kevin; Hall, Stuart A.; Lee, Scott; Marin, Luis E.; Suarez, Gerardo; Quezada-Muneton, Juan Manuel; Urrutia-Fucugauchi, Jaime

    1993-01-01

    The K-T-aged Chicxulub Impact Structure is buried beneath the Tertiary carbonate rocks of the Northern Yucatan Platform. Consequently its morphology and structure are poorly understood. Reprocessed Bouguer (onshore) and Free Air (offshore) gravity data over Northern Yucatan reveal that Chicxulub may be a 200-km-diameter multi-ring impact basin with at least three concentric basin rings. The positions of these rings follow the square root of 2 spacing rule derived empirically from analysis of multi-ring basins on other planets indicating that these rings probably correspond to now-buried topographic basin rings. A forward model of the gravity data along a radial transect from the southwest margin of the structure indicates that the Chicxulub gravity signature is compatible with this interpretation. We estimate the basin rim diameter to be 204 +/- 16 km and the central peak ring diameter (D) is 104 +/- 6 km.

  16. Basin-centered gas evaluated in Dnieper-Donets basin, Donbas foldbelt, Ukraine

    SciTech Connect

    Law, B.E.; Ulmishek, G.F.; Clayton, J.L.; Kabyshev, B.P.; Pashova, N.T.; Krivosheya, V.A.

    1998-11-23

    An evaluation of thermal maturity, pore pressures, source rocks, reservoir quality, present-day temperatures, and fluid recovery data indicates the presence of a large basin-centered gas accumulation in the Dnieper-Donets basin (DDB) and Donbas foldbelt (DF) of eastern Ukraine. This unconventional accumulation covers an area of at least 35,000 sq km and extends vertically through as much as 7,000 m of Carboniferous rocks. The gas accumulation is similar, in many respects, to some North American accumulations such as Elmworth in the Alberta basin of western Canada, the Greater Green River basin of southwestern Wyoming, and the Anadarko basin of Oklahoma. Even though rigorous assessments of the recoverable gas have not been conducted in the region, a comparison of the dimensions of the accumulation to similar accumulations in the US indicates gas resources in excess of 100 tcf in place. The paper describes the geology, the reservoirs, source rocks, seals, and recommendations for further study.

  17. Basin analysis of tertiary strata in the Pattani Basin, Gulf of Thailand

    SciTech Connect

    Chonchawalit, A. ); Bustin, R.M. )

    1994-07-01

    The stratigraphic and structural evolution of the Pattani basin, the most prolific petroleum basin in Thailand, reflects the extensional tectonics of continental southeast Asia. East-west extension, a product of the northward collision of India with Eurasia since the early Tertiary resulted in the formation of a series of north-south-trending sedimentary basins including the Pattani basin. Subsidence and thermal histories of the basin can generally be accounted for by nonuniform lithospheric stretching. The validity of nonuniform lithospheric stretching as a mechanic for the formation of the Pattani basin is confirmed by a reasonably good agreement between modeled and observed vitrinite reflectance at various depths and locations. The amount of stretching and surface heat flow generally increases from the basin margin to the basin center. Crustal stretching factor ([beta]) ranges from 1.3 at the basin margin to 2.8 in the center. Subcrustal stretching factor ([sigma]) ranges from 1.3 at the margin to more than 3.0 in the center. The stretching of the lithosphere may have extended basement rocks as much as 45 to 90 km and may have caused the upwelling of asthenosphere, resulting in high heat flow. The sedimentary succession in the Pattani basin is divisible into synrift and postrift sequences. The synrift sequences comprise (1) late Eocene ( ) to early Oligocene alluvial fan, braided river, and flood-plain deposits; (2) late Oligocene to early Miocene floodplain and channel deposits; and (3) an early Miocene regressive package of marine to nonmarine sediments. Deposition of synrift sequences corresponded to rifting and extension, which included episodic block faulting and rapid subsidence. Postrift succession comprises (1) an early to middle Miocene regressive package of shallow marine to nonmarine sediments, (2) a late early Miocene transgressive package; and (3) a late Miocene to Pleistocene transgression succession.

  18. Australia`s southeastern Bonaparte basin has plenty of potential

    SciTech Connect

    Miyazaki, S.

    1997-04-21

    Situated in the Timor Sea and Joseph Bonaparte Gulf regions, the Bonaparte basin is one of the Phanerozoic basins of what is now called the North West Shelf of Australia. This basin consists of a number of Paleozoic and Mesozoic synclines and horsts. Drilling success rate for this basin is one of the highest in Australia in the last 5 years. New opportunities are available in the southeastern Bonaparte basin, where seven vacant tracts have just been released for application for exploration permits. The paper discusses the regional geology, previous exploration activities, and potentials of the southern Petrel sub-basin and Darwin shelf.

  19. Quaternary Faults and Basin-fill Sediments of the Las Vegas Basin, Southern Nevada

    NASA Astrophysics Data System (ADS)

    Taylor, W. J.; Fossett, E.; Luke, B.; Snelson, C.; Rasmussen, T.; McCallen, D.; Rodgers, A.; Louie, J.

    2003-12-01

    The N-S elongated extensional Las Vegas basin, southern Nevada, contains 100's of meters of Cenozoic basin-fill sediments that are cut by several Quaternary (Q) faults. These faults define or influence the basin geometry. The basin is generally an asymmetrical half graben defined by the W-dipping, Q Frenchman Mountain fault (FMF) along its E side and a series of smaller offset E-dipping faults to the W. The N terminus of the basin is controlled by the Las Vegas Valley shear zone, along which the majority of the offset occurred prior to the Q. Here, we asses the influence of the Q faults on the distribution of the sedimentary units. Well, exposure, seismic reflection and seismic refraction data show that sedimentary units of different grain sizes or seismic velocity dominate different parts of the basin. Sections dominated by coarse clastic deposits occupy a narrow area along the E side of the basin. Coarse clastic sediments are mixed with finer grained sediments in a broader area along the W side of the basin. Based on provenance and alluvial fan distribution, the coarse deposits along the E side of the basin appear to be trapped in close proximity to the W-dipping FMF. The coarse-grained deposits along the opposite, W side of the basin, are sourced from the nearby Spring Mountains. Because of the structural asymmetry of the basin, these sediments traveled farther from their source area than those on the E side. Some of these E-dipping faults influence the depth to Paleozoic bedrock and some faults form small sub-basins filled with finer grained sediments. Along a WNW trend near the center of the basin and near the present-day Las Vegas Wash, a change in the grain size distribution occurs up stratgraphic section: continuous clay layers are less common and coarse-grained deposits are more common. This difference may reflect a change from internal drainage early in the basin history to external drainage through the Las Vegas Wash in the latter history of the basin

  20. A geological history of the Turkana Basin.

    PubMed

    Feibel, Craig S

    2011-01-01

    The Turkana Basin preserves a long and detailed record of biotic evolution, cultural development, and rift valley geology in its sedimentary strata. Before the formation of the modern basin, Cretaceous fluvial systems, Paleogene lakes, and Oligo-Miocene volcano-sedimentary sequences left fossil-bearing strata in the region. These deposits were in part related to an early system of rift basins that stretched from Sudan to the Indian Ocean. The present-day basin has its origins in Pliocene tectonic developments of the modern rift, with subsidence making room for more than one kilometer of Plio-Pleistocene strata. Much of this sequence belongs to the Omo Group, richly fossiliferous sediments associated with the ancestral Omo River and its tributaries. Modern Lake Turkana has a record stretching back more than 200 thousand years, with earlier lake phases throughout the Plio-Pleistocene. The geologic history of the basin is one of dynamic landscapes responding to environmental influences, including tectonics, volcanic activity and climate. PMID:22170690

  1. Hydrocarbon potential of lower Magdalena basin

    SciTech Connect

    Torres, E.; Valderrama, R. )

    1989-03-01

    The Lower Magdalena basin complex of Colombia has an areal extent of more than 87,000 km{sup 2}. The geologic setting of the different subbasins of the Lower Magdalena presents attractive play concepts for the generation, entrapment, and production of hydrocarbons. The sedimentary sequence within the basin attains a thickness in excess of 12,200 m, with the preponderance of this section being of Tertiary age. This major thickness of section contains good source and reservoir rocks and seals and an abundance of structural and stratigraphic traps, which make the basin attractive for new interpretation and evaluation. The Plato, San Jorge, and Sinu subbasins lie within the Lower Magdalena complex. Each of these presents different geological conditions, thereby offering a variety of play concepts for hydrocarbon exploration. Previous exploration in the Lower Magdalena has resulted in the discovery of 10 small to moderate-size fields, which have produced nearly 200 million bbl of oil. The density of exploration drilling within the basin is one well/435 km{sup 2}, thereby allowing the opportunity for more discoveries to be realized. The existence of a thick Tertiary section with excellent source beds and a tectonic history that allows for both structural and stratigraphic traps presents an excellent opportunity for the application of modern exploration techniques to reevaluate the potential of a basin that has not been thoroughly evaluated due to complex exploration problems.

  2. Offshore Essaouira basin: Geology and hydrocarbon potential

    SciTech Connect

    Jabour, H.; Ait Salem, A. )

    1991-03-01

    The study area lies in the offshore extension of the onshore Essaouria basin. The Mesozoic development of the Essaouira margin was largely controlled by Late Triassic to Mid-Jurassic rifting and subsequent opening of the Central Atlantic, with the evolution of a typical passive, opening of the Central Atlantic, with the evolution of a typical passive, continental margin. Diapiric salt structure recognized on seismic defines a Late Triassic-Early Jurassic salt basin in the offshore area initiated during early rifting. Subsidence and sea-level rise during Jurassic resulted in carbonate platform development. This was followed during Cretaceous and Tertiary time by the deposition of a prograding siliciclastic system. Only three wells have been drilled in this basin. Although drilled on poorly defined prospects, these wells encountered gas and oil shows. Fairly extensive seismic coverage of good quality data is now available. A study based on an integrated approach involving seismic facies definition and mapping, correlation with well data, identification of the principal control on sedimentation, and basin modeling in conjunction with source rock prediction and maturity modeling has been carried out. Results have shown that hydrocarbon potential in the offshore Essaouira basin has not yet been substantiated by drilling. Attractive structural and stratigraphic prospects exist in the shelf, shelf edge, and the slope, and await confirmation by drilling.

  3. Petroleum geochemistry of the Zala basin, Hungary

    SciTech Connect

    Clayton, J.L. ); Koncz, I. )

    1994-01-01

    The Zala basin is a subbasin within the Pannonian basis on Hungary. Oil and smaller amounts of gas are produced from Upper Triassic through Miocene reservoirs. Our geochemical study of oils and rocks in the basin indicate that two, and possibly three, genetic oil types are present in the basin. Miocene source rocks, previously believed by explorationists to be the predominant source rock, have expelled minor amounts of hydrocarbons. The main source rock is the Upper Triassic (Rhaetian) Koessen Marl Formation or its stratigraphic equivalent. Oils derived from the Triassic source rock are recognizable by their isotopic and biological marker composition, and high content of metals. In other areas of Europe, Upper Triassic source rocks have been correlated with large oil accumulations (e.g., Molassa and Villafortuna fields, Po basin, and other fields in Italy) or are postulated to be good potential source rocks (e.g., Bristol channel Trough). Knowledge of the geochemical characteristics of oils derived from these Upper Triassic source rocks and understanding of the source rock distribution and maturation history are important for recognizing Triassic oil-source bed relationships and for further exploration in other basins in Hungary and other parts of Europe where Triassic source rocks are present.

  4. Hydrothermal Activity in the Northern Guaymas Basin

    NASA Astrophysics Data System (ADS)

    Berndt, C.; Hensen, C.; Mortera-Gutierrez, C. A.; Sarkar, S.; Geilert, S.; Schmidt, M.; Liebetrau, V.; Kipfer, R.; Scholz, F.; Doll, M.; Muff, S.; Karstens, J.; Böttner, C.; Chi, W. C.; Moser, M.; Behrendt, R.; Fiskal, A.; Evans, T.; Planke, S.; Lizarralde, D.; Lever, M. A.

    2015-12-01

    Rift-related magmatism in the Guaymas Basin, Gulf of California induces hydrothermal activity within the basin sediments. Mobilized fluids migrate to the seafloor where they are emitted into the water column changing ocean chemistry and fuelling chemosynthetic ecosystems. New seismic and geochemical data from the northern rift arm of the Guaymas Basin document the variety of fluid expulsion phenomena from large-scale subsurface sediment mobilization related to contact metamorphosis to focused small-scale structures. The geochemical composition of emitted fluids depends largely on the age of the fluid escape structures with respect to the underlying intrusions. Whereas, old structures are dominated by methane emission, young vent sites are characterized by hot fluids that carry a wide range of minerals in solution. The overall high geothermal gradient within the basin (mainly between 160 and 260 °C/km) leads to a thin gas hydrate stability zone. Thus, deep hydrothermal fluid advection affects the gas hydrate system and makes it more dynamic than in colder sedimentary basins.

  5. Surficial deposits in the Bear Lake Basin

    USGS Publications Warehouse

    Reheis, Marith C.; Laabs, Benjamin J.C.; Forester, Richard M.; McGeehin, John P.; Kaufman, Darrell S.; Bright, Jordon

    2005-01-01

    Mapping and dating of surficial deposits in the Bear Lake drainage basin were undertaken to provide a geologic context for interpretation of cores taken from deposits beneath Bear Lake, which sometimes receives water and sediment from the glaciated Bear River and sometimes only from the small drainage basin of Bear Lake itself. Analyses of core sediments by others are directed at (1) constructing a high-resolution climate record for the Bear Lake area during the late Pleistocene and Holocene, and (2) investigating the sources and weathering history of sediments in the drainage basin. Surficial deposits in the upper Bear River and Bear Lake drainage basins are different in their overall compositions, although they do overlap. In the upper Bear River drainage, Quaternary deposits derived from glaciation of the Uinta Range contain abundant detritus weathered from Precambrian quartzite, whereas unglaciated tributaries downstream mainly contribute finer sediment weathered from much younger, more friable sedimentary rocks. In contrast, carbonate rocks capped by a carapace of Tertiary sediments dominate the Bear Lake drainage basin.

  6. Tectonisation of basin edges on Mercury

    NASA Astrophysics Data System (ADS)

    Rothery, David; Massironi, Matteo

    2013-04-01

    Lobate scarps on Mercury are generally accepted to be surface expressions of thrust faulting. This is taken as evidence of lithospheric contraction on a global scale, reflecting either global cooling, leading to thermal contraction and internal phase changes; or tidal despinning, leading to collapse of an equatorial bulge; or a combination of both. It has been further suggested that the orientations of lobate scarps could reflect a pattern of mantle convection. Here we review compressional tectonics localized along the interface between basin-fill and the inner walls of >200 km diameter mercurian impact basins. This occurs as outward-directed thrust faults following the inside of basin rims, and sometimes completely over-thrusting the rim location. Thrusting at the edges of low-latitude basins tends to be most strongly developed at eastern and western rims, suggesting tidal despinning as a driving force. Cross-cutting relationships show examples of thrusting that must considerably post-date the volcanic infilling of the associated basin, suggesting despinning occurring (or continuing) well after the end of the late heavy bombardment, contrary to previous expectations.

  7. Satellite altimetry over large hydrological basins

    NASA Astrophysics Data System (ADS)

    Calmant, Stephane

    2015-04-01

    The use of satellite altimetry for hydrological applications, either it is basin management or hydrological modeling really started with the 21st century. Before, during two decades, the efforts were concentrated on the data processing until a precision of a few decimeters could be achieved. Today, several web sites distribute hundreds of series spread over hundeds of rivers runing in the major basins of the world. Among these, the Amazon basin has been the most widely studied. Satellite altimetry is now routinely used in this transboundary basin to predict discharges ranging over 4 orders of magnitude. In a few years, satellite altimetry should evolve dramatically. This year, we should see the launchs of Jason-3 and that of Sentinel-3A operating in SAR mode. With SAR, the accuracy and resolution of a growing number of measurements should be improved. In 2020, SWOT will provide a full coverage that will join in a unique framework all the previous and forthcoming missions. These technical and thematical evolutions will be illustrated by examples taken in the Amazon and Congo basin.

  8. Maturation modeling in Otway Basin, Australia

    SciTech Connect

    Middleton, M.F.; Falvey, D.A.

    1983-02-01

    The Otway basin is a Jurassic to Pliocene sedimentary basin formed on the southern Australian continental margin. Its formation is associated with rifting and breakup of the Australian and Antarctic plates. Lithospheric cooling and contraction have probably produced post-breakup subsidence. Either lithospheric stretching or deep crustal metamorphism may have produced pre-breakup subsidence. These mechanisms have identifiable thermal histories. Organic diagenesis (specifically the reflectance of vitrinite in oil) is empirically determined by the thermal and depositional history of an organic sediment. Thus, the stages of hydrocarbon maturity of Otway basin sediments can be modeled. Depositional history is determined from ''geohistory analysis'' and thermal history depends on the subsidence mechanism applied to the basin. A paleo-heat-flow history derived from the deep crustal metamorphism model of subsidence produces a maturation profile with depth that is consistent with observed vitrinite reflectance data, although organic diagenesis modeling is relatively insensitive to precise details of thermal history. Depositional and maturation history modeling for the present day, 20 Ma ago, 40 Ma ago, and 60 Ma ago is applied to a seismic profile across the southern Australian continental shelf in the Otway basin as a demonstration of the projection backward in time of sedimentation and organic diagenesis.

  9. Exploration in the Ombilin Intermontane Basin, West Sumatra

    SciTech Connect

    Koning, T. Petroleum Co., Lagos )

    1996-01-01

    The Ombilin Basin is a Tertiary intermontane basin located within the Barisan Mountain Range of Sumatra. Oil exploration commenced in the Ombilin Basin in the early 1980s when geological mapping was carried out, a synthetic aperture radar survey was flown, and a basin-wide geophysical survey was completed. This effort led to the drilling of Sinimar No. 1 to a total depth 3020 m. Sinimar No. 1 was a historic well in Indonesia's oil industry since it was the first oil exploration well drilled in the Ombilin Basin and also the first well drilled in an intermontane basin in Indonesia. Oil, gas and condensate was tested in the well. An integrated interpretation of the well, geophysical and outcrop data indicates that despite its small areal size (30 km x 50 km), the Ombilin Basin is a deep pull-apart basin containing up to 4500 m of Tertiary sediments, ranging in age from Middle Eocene to Early Miocene. The basin currently is in an intermontane basin structural setting but it was also an intermontane basin during its Early Tertiary depositional history. During the Eocene, alluvial fans and massive debris flows were deposited on the basin margins and a large lake occupied the basin center. Fluvial deposition occurred in the basin during the Oligocene followed by deposition of marine shales, sandstones, and isolated reefs during the Miocene. Although the Ombilin Basin is located within Sumatra's magmatic arc and is partially covered by volcanics from extinct and active volcanoes, the subsurface temperature gradients of 1.62 deg. F/100 ft. recorded in Sinimar No. I and 1.47 deg F/100 ft. measured in a deep (670 m) coal exploration core hole are significantly cooler than the average subsurface temperature gradients in the Sumatra back-arc basins. Organic-rich Eocene lacustrine shales are the likely source rocks for the hydrocarbons tested in Sinimar No. 1 and the oil seeps located along the basin margins.

  10. Exploration in the Ombilin Intermontane Basin, West Sumatra

    SciTech Connect

    Koning, T.

    1996-12-31

    The Ombilin Basin is a Tertiary intermontane basin located within the Barisan Mountain Range of Sumatra. Oil exploration commenced in the Ombilin Basin in the early 1980s when geological mapping was carried out, a synthetic aperture radar survey was flown, and a basin-wide geophysical survey was completed. This effort led to the drilling of Sinimar No. 1 to a total depth 3020 m. Sinimar No. 1 was a historic well in Indonesia`s oil industry since it was the first oil exploration well drilled in the Ombilin Basin and also the first well drilled in an intermontane basin in Indonesia. Oil, gas and condensate was tested in the well. An integrated interpretation of the well, geophysical and outcrop data indicates that despite its small areal size (30 km x 50 km), the Ombilin Basin is a deep pull-apart basin containing up to 4500 m of Tertiary sediments, ranging in age from Middle Eocene to Early Miocene. The basin currently is in an intermontane basin structural setting but it was also an intermontane basin during its Early Tertiary depositional history. During the Eocene, alluvial fans and massive debris flows were deposited on the basin margins and a large lake occupied the basin center. Fluvial deposition occurred in the basin during the Oligocene followed by deposition of marine shales, sandstones, and isolated reefs during the Miocene. Although the Ombilin Basin is located within Sumatra`s magmatic arc and is partially covered by volcanics from extinct and active volcanoes, the subsurface temperature gradients of 1.62 deg. F/100 ft. recorded in Sinimar No. I and 1.47 deg F/100 ft. measured in a deep (670 m) coal exploration core hole are significantly cooler than the average subsurface temperature gradients in the Sumatra back-arc basins. Organic-rich Eocene lacustrine shales are the likely source rocks for the hydrocarbons tested in Sinimar No. 1 and the oil seeps located along the basin margins.

  11. Miocene tephrochronology in the northern Basin and Range

    SciTech Connect

    Perkins, M.E.; Brown, F.H.; Nash, W.P. . Dept. of Geology and Geophysics)

    1993-04-01

    Silicic air-fall tephra layers with unaltered glass shards preserved in Miocene basins of the northern Basin and Range Province (NBR) were sampled from well-exposed sections in the Goose Creek (GCB) and Ibapah (IB) basins in the northeastern NBR, and the El Pasco basin (EPB) in the southwestern NBR. Each basin may contain up to 50 tephras. Glass shards from individual tephras in any one basin are compositionally distinct, as shown by XRF and electron microprobe analysis. Seventeen tephra correlate between two or more basins; 12 of these are regionally important, providing precise stratigraphic ties across the NbR. Four regionally correlative tephras are white biotitic ashes from southern Nevada sources, whereas eight are gray vitric ashes from Yellowstone hot spot sources. Dates on tephra layers and lava flows in the basins, and on ashflow units correlated with four other tephra provide a preliminary chronology for the tephra in the all basins. In each section [Delta]h/[Delta]t appears constant on time scales [>=]1 Ma, but variation in [Delta]h/[Delta]t is demonstrated from IB, and is likely typical of all basins. Sedimentation in all five basins begins in the time interval of 14.5--12.5 Ma, which may represent the beginning of a phase of regional extension in the NBR. Post-[approximately]9.5 Ma deformation has affected all basins and likely contributed to the termination of sedimentation in the exposed areas of these basins.

  12. Modified Streamflows 1990 Level of Irrigation : Missouri, Colorado, Peace and Slave River Basin, 1928-1989.

    SciTech Connect

    A.G. Crook Company; United States. Bonneville Power Administration

    1993-07-01

    This report presents data for monthly mean streamflows adjusted for storage change, evaporation, and irrigation, for the years 1928-1990, for the Colorado River Basin, the Missouri River Basin, the Peace River Basin, and the Slave River Basin.

  13. Configuration Management Plan for K Basins

    SciTech Connect

    Weir, W.R.; Laney, T.

    1995-01-27

    This plan describes a configuration management program for K Basins that establishes the systems, processes, and responsibilities necessary for implementation. The K Basins configuration management plan provides the methodology to establish, upgrade, reconstitute, and maintain the technical consistency among the requirements, physical configuration, and documentation. The technical consistency afforded by this plan ensures accurate technical information necessary to achieve the mission objectives that provide for the safe, economic, and environmentally sound management of K Basins and the stored material. The configuration management program architecture presented in this plan is based on the functional model established in the DOE Standard, DOE-STD-1073-93, {open_quotes}Guide for Operational Configuration Management Program{close_quotes}.

  14. Southern Colombia's Putumayo basin deserves renewed attention

    SciTech Connect

    Matthews, A.J. ); Portilla, O. )

    1994-05-23

    The Putumayo basin lies in southern Colombia between the Eastern Cordillera of the Andes and the Guyana-Brazilian shield. It covers about 50,000 sq km between 0--3[degree]N. Lat. and 74--77[degree]W. Long. and extends southward into Ecuador and Peru as the productive Oriente basin. About 3,500 sq km of acreage in the basin is being offered for licensing in the first licensing round by competitive tender. A recent review of the available data from this area by Intera and Ecopetrol suggests that low risk prospects and leads remain to be tested. The paper describes the tectonic setting, stratigraphy, structure, hydrocarbon geology, reservoirs, and trap types.

  15. Aptian anoxia in the Pacific Basin

    SciTech Connect

    Sliter, W.V. )

    1989-10-01

    Marine strata of Aptian age in the Pacific Basin include two distinct levels that represent episodes during which sediments rich in organic carbon were deposited. Both episodes lasted less than 1 m.y., as revealed in strata deposited atop submerged topographic highs. One unusually widespread episode of early Aptian age ({approximately}117.5 Ma) correlates with coeval units in Europe and thus is analogous to the Cenomanian-Turonian oceanic anoxic event in its short duration and wide geographic extent. The second episode of late Aptian age ({approximately}116.5 Ma) is restricted to allochthonous pelagic deposits in the Franciscan Complex of California. These results support the concept of widespread and narrowly synchronous anoxic events. Further, they show that organic carbon deposition in the Pacific Basin took place in intermediate water oxygen-minimum zones and thus differed in the mode of deposition, and hence paleoceanography, from that in other middle Cretaceous ocean basins.

  16. Evaluating climate change impacts in snowmelt basins

    NASA Astrophysics Data System (ADS)

    Gleick, Peter H.; Rango, Albert; Cooley, Keith

    The implications of global climate change for hydrology and water resources are likely to be complex, widespread, and significant for both natural ecosystems and society. Yet our understanding of these implications remains rudimentary despite considerable effort and research over the last decade. One of the most difficult hydrologic problems in this area is evaluating the impacts of climate change in hydrologic basins affected by snowfall and snowmelt, especially high-latitude and high-altitude watersheds. Many of these watersheds are the headwaters for major rivers and they often provide substantial amounts of water for human and ecosystem use. Evaluating the impacts of climate change in these basins will help us better understand how to improve the management and protection of our water resources systems. In April 1993, a roundtable workshop was held in Santa Fe, N. Mex., to discuss hydrologic models for evaluating the impacts of climate change in snowmelt basins.

  17. Basin topology in dissipative chaotic scattering.

    PubMed

    Seoane, Jesús M; Aguirre, Jacobo; Sanjuán, Miguel A F; Lai, Ying-Cheng

    2006-06-01

    Chaotic scattering in open Hamiltonian systems under weak dissipation is not only of fundamental interest but also important for problems of current concern such as the advection and transport of inertial particles in fluid flows. Previous work using discrete maps demonstrated that nonhyperbolic chaotic scattering is structurally unstable in the sense that the algebraic decay of scattering particles immediately becomes exponential in the presence of weak dissipation. Here we extend the result to continuous-time Hamiltonian systems by using the Henon-Heiles system as a prototype model. More importantly, we go beyond to investigate the basin structure of scattering dynamics. A surprising finding is that, in the common case where multiple destinations exist for scattering trajectories, Wada basin boundaries are common and they appear to be structurally stable under weak dissipation, even when other characteristics of the nonhyperbolic scattering dynamics are not. We provide numerical evidence and a geometric theory for the structural stability of the complex basin topology. PMID:16822004

  18. Independent focuses Philippines exploration on Visayan basin

    SciTech Connect

    Rillera, F.G.

    1995-08-21

    Cophil Exploration Corp., a Filipino public company, spearheaded 1995 Philippine oil and gas exploration activity with the start of its gas delineation drilling operations in Libertad, northern Cebu. Cophil and its Australian partners, Coplex Resources NL and PacRim Energy NL, have set out to complete a seven well onshore drilling program within this block this year. The companies are testing two modest shallow gas plays, Libertad and Dalingding, and a small oil play, Maya, all in northern Cebu about 500 km southeast of Manila. Following a short discussion on the geology and exploration history of the Visayan basin, this article briefly summarizes Cophil`s ongoing Cebu onshore drilling program. Afterwards, discussion focuses on identified exploration opportunities in the basin`s offshore sector.

  19. Hydrocarbon maturation in Laramide basins - constraints from evolution of northern Big Horn basin, Wyoming and Montana

    SciTech Connect

    Hagen, E.S.; Furlong, K.P.; Surdam, R.C.

    1984-04-01

    Thermal and mechanical models were used to quantify the effects of Laramide uplifts and subsequent synorogenic deposition on the hydrocarbon maturation of Cretaceous source rocks in the Big Horn basin. Laramide deformation and resultant sedimentation has clearly affected hydrocarbon maturation of Cretaceous source rocks. (Thermopolis, Mowry, Frontier, Cody). Modified Lopatin-type reconstructions suggest that a significant region containing Cretaceous source rocks has been within the liquid hydrocarbon window. The earliest onset of hydrocarbon maturation in the northern Big Horn basin was latest Eocene, with some regions still containing immature Cretaceous source rocks as a consequence of Cenozoic erosion, uplift of the Pryor Mountains, and lack of burial. Regional geologic features indicate that the basin formed as a result of flexural compensation of an elastic lithosphere during emplacement of the Beartooth and Pryor Mountains, and possibly the Absaroka volcanics. This was determined by 2-dimensional models which predict sediment thickness caused by tectonic loading and subsequent sedimentation. Flexural rigidities of 10/sup 2/2exclamation-10/sup 22/ newton-meters adequately explain flexural subsidence in the northern Big Horn basin. The present basin configuration also was compared with a theoretical profile based on geologic constraints. Subsidence models for the present basin profile suggest the Paleocene thrusting of the Beartooth block contributes a majority of the tectonic loading and that Cenozoic erosion has drastically affected the resultant sedimentary sequence (Fort Union and Wasatch). These models, along with stratigraphic reconstructions, can be combined to pinpoint areas of potential hydrocarbon maturation within Laramide-type basins.

  20. The "normal" elongation of river basins

    NASA Astrophysics Data System (ADS)

    Castelltort, Sebastien

    2013-04-01

    The spacing between major transverse rivers at the front of Earth's linear mountain belts consistently scales with about half of the mountain half-width [1], despite strong differences in climate and rock uplift rates. Like other empirical measures describing drainage network geometry this result seems to indicate that the form of river basins, among other properties of landscapes, is invariant. Paradoxically, in many current landscape evolution models, the patterns of drainage network organization, as seen for example in drainage density and channel spacing, seem to depend on both climate [2-4] and tectonics [5]. Hovius' observation [1] is one of several unexplained "laws" in geomorphology that still sheds mystery on how water, and rivers in particular, shape the Earth's landscapes. This narrow range of drainage network shapes found in the Earth's orogens is classicaly regarded as an optimal catchment geometry that embodies a "most probable state" in the uplift-erosion system of a linear mountain belt. River basins currently having an aspect away from this geometry are usually considered unstable and expected to re-equilibrate over geological time-scales. Here I show that the Length/Width~2 aspect ratio of drainage basins in linear mountain belts is the natural expectation of sampling a uniform or normal distribution of basin shapes, and bears no information on the geomorphic processes responsible for landscape development. This finding also applies to Hack's [6] law of river basins areas and lengths, a close parent of Hovius' law. [1]Hovius, N. Basin Res. 8, 29-44 (1996) [2]Simpson, G. & Schlunegger, F. J. Geophys. Res. 108, 2300 (2003) [3]Tucker, G. & Bras, R. Water Resour. Res. 34, 2751-2764 (1998) [4]Tucker, G. & Slingerland, R. Water Resour. Res. 33, 2031-2047 (1997) [5]Tucker, G. E. & Whipple, K. X. J. Geophys. Res. 107, 1-1 (2002) [6]Hack, J. US Geol. Surv. Prof. Pap. 294-B (1957)