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Sample records for 15n tracer study

  1. Sinks for nitrogen inputs in terrestrial ecosystems: a meta-analysis of 15N tracer field studies

    USGS Publications Warehouse

    Templer, P.H.; Mack, M.C.; Chapin, F. S.; Christenson, L.M.; Compton, J.E.; Crook, H.D.; Currie, W.S.; Curtis, C.J.; Dail, D.B.; D'Antonio, C. M.; Emmett, B.A.; Epstein, H.E.; Goodale, C.L.; Gundersen, P.; Hobbie, S.E.; Holland, K.; Hooper, D.U.; Hungate, B.A.; Lamontagne, S.; Nadelhoffer, K.J.; Osenberg, C.W.; Perakis, S.S.; Schleppi, P.; Schimel, J.; Schmidt, I.K.; Sommerkorn, M.; Spoelstra, J.; Tietema, A.; Wessel, W.W.; Zak, D.R.

    2012-01-01

    Effects of anthropogenic nitrogen (N) deposition and the ability of terrestrial ecosystems to store carbon (C) depend in part on the amount of N retained in the system and its partitioning among plant and soil pools. We conducted a meta-analysis of studies at 48 sites across four continents that used enriched 15N isotope tracers in order to synthesize information about total ecosystem N retention (i.e., total ecosystem 15N recovery in plant and soil pools) across natural systems and N partitioning among ecosystem pools. The greatest recoveries of ecosystem 15N tracer occurred in shrublands (mean, 89.5%) and wetlands (84.8%) followed by forests (74.9%) and grasslands (51.8%). In the short term (15N tracer application), total ecosystem 15N recovery was negatively correlated with fine-root and soil 15N natural abundance, and organic soil C and N concentration but was positively correlated with mean annual temperature and mineral soil C:N. In the longer term (3–18 months after 15N tracer application), total ecosystem 15N retention was negatively correlated with foliar natural-abundance 15N but was positively correlated with mineral soil C and N concentration and C: N, showing that plant and soil natural-abundance 15N and soil C:N are good indicators of total ecosystem N retention. Foliar N concentration was not significantly related to ecosystem 15N tracer recovery, suggesting that plant N status is not a good predictor of total ecosystem N retention. Because the largest ecosystem sinks for 15N tracer were below ground in forests, shrublands, and grasslands, we conclude that growth enhancement and potential for increased C storage in aboveground biomass from atmospheric N deposition is likely to be modest in these ecosystems. Total ecosystem 15N recovery decreased with N fertilization, with an apparent threshold fertilization rate of 46 kg N·ha-1·yr-1 above which most ecosystems showed net losses of applied 15N tracer in response to N fertilizer addition.

  2. Sinks for nitrogen inputs in terrestrial ecosystems: a meta-analysis of 15N tracer field studies.

    PubMed

    Templer, P H; Mack, M C; Chapin, F S; Christenson, L M; Compton, J E; Crook, H D; Currie, W S; Curtis, C J; Dail, D B; D'Antonio, C M; Emmett, B A; Epstein, H E; Goodale, C L; Gundersen, P; Hobbie, S E; Holland, K; Hooper, D U; Hungate, B A; Lamontagne, S; Nadelhoffer, K J; Osenberg, C W; Perakis, S S; Schleppi, P; Schimel, J; Schmidt, I K; Sommerkorn, M; Spoelstra, J; Tietema, A; Wessel, W W; Zak, D R

    2012-08-01

    Effects of anthropogenic nitrogen (N) deposition and the ability of terrestrial ecosystems to store carbon (C) depend in part on the amount of N retained in the system and its partitioning among plant and soil pools. We conducted a meta-analysis of studies at 48 sites across four continents that used enriched 15N isotope tracers in order to synthesize information about total ecosystem N retention (i.e., total ecosystem 15N recovery in plant and soil pools) across natural systems and N partitioning among ecosystem pools. The greatest recoveries of ecosystem 15N tracer occurred in shrublands (mean, 89.5%) and wetlands (84.8%) followed by forests (74.9%) and grasslands (51.8%). In the short term (< 1 week after 15N tracer application), total ecosystem 15N recovery was negatively correlated with fine-root and soil 15N natural abundance, and organic soil C and N concentration but was positively correlated with mean annual temperature and mineral soil C:N. In the longer term (3-18 months after 15N tracer application), total ecosystem 15N retention was negatively correlated with foliar natural-abundance 15N but was positively correlated with mineral soil C and N concentration and C:N, showing that plant and soil natural-abundance 15N and soil C:N are good indicators of total ecosystem N retention. Foliar N concentration was not significantly related to ecosystem 15N tracer recovery, suggesting that plant N status is not a good predictor of total ecosystem N retention. Because the largest ecosystem sinks for 15N tracer were below ground in forests, shrublands, and grasslands, we conclude that growth enhancement and potential for increased C storage in aboveground biomass from atmospheric N deposition is likely to be modest in these ecosystems. Total ecosystem 15N recovery decreased with N fertilization, with an apparent threshold fertilization rate of 46 kg N x ha(-1) x yr(-1) above which most ecosystems showed net losses of applied 15N tracer in response to N fertilizer

  3. Salt marsh ecosystem biogeochemical responses to nutrient enrichment: a paired 15N tracer study.

    PubMed

    Drake, D C; Peterson, Bruce J; Galván, Kari A; Deegan, Linda A; Hopkinson, Charles; Johnson, J Michael; Koop-Jakobsen, K; Lemay, Lynsey E; Picard, Christian

    2009-09-01

    We compared processing and fate of dissolved NO3- in two New England salt marsh ecosystems, one receiving natural flood tide concentrations of approximately 1-4 micromol NO3-/ L and the other receiving experimentally fertilized flood tides containing approximately 70-100 micromol NO3-/ L. We conducted simultaneous 15NO3- (isotope) tracer additions from 23 to 28 July 2005 in the reference (8.4 ha) and fertilized (12.4 ha) systems to compare N dynamics and fate. Two full tidal cycles were intensively studied during the paired tracer additions. Resulting mass balances showed that essentially 100% (0.48-0.61 mol NO3-N.ha(-1).h(-1)) of incoming NO3- was assimilated, dissimilated, sorbed, or sedimented (processed) within a few hours in the reference system when NO3- concentrations were 1.3-1.8 micromol/L. In contrast, only 50-60% of incoming NO3- was processed in the fertilized system when NO3- concentrations were 84-96 micromol/L; the remainder was exported in ebb tidewater. Gross NO3- processing was approximately 40 times higher in the fertilized system at 19.34-24.67 mol NO3-N.ha(-1).h(-1). Dissimilatory nitrate reduction to ammonium was evident in both systems during the first 48 h of the tracer additions but <1% of incoming 15NO3- was exported as 15NH4+. Nitrification rates calculated by 15NO3- dilution were 6.05 and 4.46 mol.ha(-1).h(-1) in the fertilized system but could not be accurately calculated in the reference system due to rapid (<4 h) NO3- turnover. Over the five-day paired tracer addition, sediments sequestered a small fraction of incoming NO3-, although the efficiency of sequestration was 3.8% in the reference system and 0.7% in the fertilized system. Gross sediment N sequestration rates were similar at 13.5 and 12.6 mol.ha(-1).d(-1), respectively. Macrophyte NO3- uptake efficiency, based on tracer incorporation in aboveground tissues, was considerably higher in the reference system (16.8%) than the fertilized system (2.6%), although bulk uptake of NO3

  4. Effects of trichloroacetic acid on the nitrogen metabolism of Pinus sylvestris--a 13C/15N tracer study.

    PubMed

    Hafner, Christoph; Jung, Klaus; Schüürmann, Gerrit

    2002-01-01

    Trichloroacetic acid (TCA) can be found in various environmental compartments like air, rain and plants all over the world. It is assumed that TCA is an atmospheric degradation product of volatile chloroorganic hydrocarbons. The herbicide effect of TCA in higher concentrations is well known, but not much is known about the phytotoxic effects in environmentally relevant concentrations. It can be shown in this study by using the 13C/15N stable isotope tracer technique that [13C]TCA is taken up by roots of two-year-old seedlings of Pinus sylvestris L. and transported into the needles. At the same time the effect of the substance on nitrogen metabolism can be analyzed by measuring the incorporation of 15NO3- into different nitrogen fractions of the plant. The more [13C]TCA incorporation, the higher the synthesis of 15N labelled amino acids and proteins is. These effects on the nitrogen metabolism are probably based on the activation of stress- and detoxification metabolism. It has to be assumed that there is an influence on N metabolism of Pinus sylvestris caused by the deposition of environmentally relevant TCA concentrations.

  5. Nitrate turnover in a peat soil under drained and rewetted conditions: results from a [(15)N]nitrate-bromide double-tracer study.

    PubMed

    Russow, Rolf; Tauchnitz, Nadine; Spott, Oliver; Mothes, Sibylle; Bernsdorf, Sabine; Meissner, Ralph

    2013-01-01

    Under natural conditions, peatlands are generally nitrate-limited. However, recent concerns about an additional N input into peatlands by atmospheric N deposition have highlighted the risk of an increased denitrification activity and hence the likelihood of a rise of emissions of the greenhouse gas nitrous oxide. Therefore, the aim of the present study was to investigate the turnover of added nitrate in a drained and a rewetted peatland using a [(15)N]nitrate-bromide double-tracer method. The double-tracer method allows a separation between physical effects (dilution, dispersion and dislocation) and microbial and chemical nitrate transformation by comparing with the conservative Br(-) tracer. In the drained peat site, low NO3(-) consumption rates have been observed. In contrast, NO3(-) consumption at the rewetted peat site rises rapidly to about 100% within 4 days after tracer application. Concomitantly, the (15)N abundances of nitrite and ammonium in soil water increased and lead to the conclusion that, besides commonly known NO3(-) reduction to nitrite (i.e. denitrification), a dissimilatory nitrate reduction to ammonium has simultaneously taken place. The present study reveals that increasing NO3(-) inputs into rewetted peatlands via atmospheric deposition results in a rapid NO3(-) consumption, which could lead to an increase in N2O emissions into the atmosphere.

  6. Soil processes drive seasonal variation in retention of 15N tracers in a deciduous forest catchment.

    PubMed

    Goodale, Christine L; Fredriksen, Guinevere; Weiss, Marissa S; McCalley, K; Sparks, Jed P; Thomas, Steven A

    2015-10-01

    Seasonal patterns of stream nitrate concentration have long been interpreted as demonstrating the central role of plant uptake in regulating stream nitrogen loss from forested catchments. Soil processes are rarely considered as important drivers of these patterns. We examined seasonal variation in N retention in a deciduous forest using three whole-ecosystem 15N tracer additions: in late April (post-snowmelt, pre-leaf-out), late July (mid-growing- season), and late October (end of leaf-fall). We expected that plant 15N uptake would peak in late spring and midsummer, that immobilization in surface litter and soil would peak the following autumn leaf-fall, and that leaching losses would vary inversely with 15N retention. Similar to most other 15N tracer studies, we found that litter and soils dominated ecosystem retention of added 15N. However, 15N recovery in detrital pools varied tremendously by season, with > 90% retention in spring and autumn and sharply reduced 15N retention in late summer. During spring, over half of the 15N retained in soil occurred within one day in the heavy (mineral-associated) soil fraction. During summer, a large decrease in 15N retention one week after addition coincided with increased losses of 15NO3- to soil leachate and seasonal increases in soil and stream NO3- concentrations, although leaching accounted for only a small fraction of the lost 15N (< 0.2%). Uptake of 15N into roots did not vary by season and accounted for < 4% of each tracer addition. Denitrification or other processes that lead to N gas loss may have consumed the rest. These measurements of 15N movement provide strong evidence for the dominant role of soil processes in regulating seasonal N retention and losses in this catchment and perhaps others with similar soils.

  7. Nitrogen use efficiency evaluation of aerobic rice under field capacity water potential using {sup 15}N isotopic tracer technique

    SciTech Connect

    Wahid, Ahmad Nazrul Abd; Rahim, Sahibin Abd; Rahim, Khairuddin Abdul; Harun, Abdul Rahim

    2015-09-25

    This study was carried out to evaluate the efficiency use of the nitrogen fertilizer on aerobic rice varieties MR219-4 and MR219-9 which were grown aerobically under field capacity water potential at the controlled environment area or shield house. Direct {sup 15}N isotope tracer method was used in this study, whereby the {sup 15}N isotope was utilized as a tracer for nitrogen nutrient uptake. {sup 15}N isotope presence in the samples is determined by using emission spectrometer analysis and percentage of total nitrogen is determined by using Kjeldahl method. {sup 15}N atom access value contained in the sample will be used in determining the effectiveness of the use of nitrogen in fertilizers through the specific calculation formulas. In this work, the data several data of nitrogen derived from fertilizer (Ndff), total nitrogen, nitrogen uptake and nitrogen use efficiency was obtained.

  8. Nitrogen use efficiency evaluation of aerobic rice under field capacity water potential using 15N isotopic tracer technique

    NASA Astrophysics Data System (ADS)

    Wahid, Ahmad Nazrul Abd; Rahim, Sahibin Abd; Rahim, Khairuddin Abdul; Harun, Abdul Rahim

    2015-09-01

    This study was carried out to evaluate the efficiency use of the nitrogen fertilizer on aerobic rice varieties MR219-4 and MR219-9 which were grown aerobically under field capacity water potential at the controlled environment area or shield house. Direct 15N isotope tracer method was used in this study, whereby the 15N isotope was utilized as a tracer for nitrogen nutrient uptake. 15N isotope presence in the samples is determined by using emission spectrometer analysis and percentage of total nitrogen is determined by using Kjeldahl method. 15N atom access value contained in the sample will be used in determining the effectiveness of the use of nitrogen in fertilizers through the specific calculation formulas. In this work, the data several data of nitrogen derived from fertilizer (Ndff), total nitrogen, nitrogen uptake and nitrogen use efficiency was obtained.

  9. Compound-specific 15N analysis of amino acids in 15N tracer experiments provide an estimate of newly synthesised soil protein from inorganic and organic substrates

    NASA Astrophysics Data System (ADS)

    Charteris, Alice; Michaelides, Katerina; Evershed, Richard

    2015-04-01

    Organic N concentrations far exceed those of inorganic N in most soils and despite much investigation, the composition and cycling of this complex pool of SOM remains poorly understood. A particular problem has been separating more recalcitrant soil organic N from that actively cycling through the soil system; an important consideration in N cycling studies and for the soil's nutrient supplying capacity. The use of 15N-labelled substrates as stable isotope tracers has contributed much to our understanding of the soil system, but the complexity and heterogeneity of soil organic N prevents thorough compound-specific 15N analyses of organic N compounds and makes it difficult to examine any 15N-labelled organic products in any detail. As a result, a significant proportion of previous work has either simply assumed that since the majority of soil N is organic, all of the 15N retained in the soil is organic N (e.g. Sebilo et al., 2013) or subtracted 15N-labelled inorganic compounds from bulk values (e.g. Pilbeam et al., 1997). While the latter approach is more accurate, these methods only provide an estimate of the bulk 15N value of an extremely complex and non-uniformly labelled organic pool. A more detailed approach has been to use microbial biomass extraction (Brookes et al., 1985) and subsequent N isotopic analysis to determine the 15N value of biomass-N, representing the fraction of 15N assimilated by microbes or the 15N cycling through the 'living' or 'active' portion of soil organic N. However, this extraction method can only generate estimates and some lack of confidence in its validity and reliability remains. Here, we present an alternative technique to obtain a measure of the assimilation of an applied 15N substrate by the soil microbial biomass and an estimate of the newly synthesized soil protein, which is representative of the magnitude of the active soil microbial biomass. The technique uses a stable isotope tracer and compound-specific 15N analysis, but

  10. Contrasting food web linkages for the grazing pathway in 3 temperate forested streams using {sup 15}N as a tracer

    SciTech Connect

    Tank, J.L.; Mulholland, P.J.; Meyer, J.L.; Bowden, W.B.; Webster, J.R.; Peterson, B.J.

    1998-11-01

    Nitrogen is a critical element controlling the productivity and dynamics of stream ecosystems and many streams are limited by the supply of biologically available nitrogen. The authors are learning more about the fate of inorganic nitrogen entering streams through {sup 15}N tracer additions. The Lotic Intersite Nitrogen Experiment (LINX) is studying the uptake, cycling, and fate of {sup 15}N-NH{sub 4} in the stream food web of 10 streams draining different biomes. Using the {sup 15}N tracer method and data from 3 sites in the study, the authors can differentiate patterns in the cycling of nitrogen through the grazing pathway (N from the epilithon to grazing macroinvertebrates) for 3 temperate forested streams. Here, they quantify the relationship between the dominant grazer and its proposed food resource, the epilithon, by comparing {sup 15}N levels of grazers with those of the epilithon, as well as the biomass, nitrogen content, and chlorophyll a standing stocks of the epilithon in 3 streams.

  11. Use of a 15N tracer to determine linkages between a mangrove and an upland freshwater swamp

    NASA Astrophysics Data System (ADS)

    MacKenzie, R. A.; Cormier, N.

    2005-05-01

    Mangrove forests and adjacent upland freshwater swamps are important components of subsistence-based economies of Pacific islands. Mangroves provide valuable firewood (Rhizophora apiculata) and mangrove crabs (Scylla serrata); intact freshwater swamps are often used for agroforestry (e.g., taro cultivation). While these two systems are connected hydrologically via groundwater and surface flows, little information is available on how they may be biogeochemically or ecologically linked. For example, mangrove leaf litter was once thought to be an important food source for resident and transient nekton and invertebrates, but this value may have been overestimated. Instead, nutrients or allochthonous material (e.g., phytoplankton, detritus) delivered via groundwater or surface water from upland freshwater swamps may play a larger role in mangrove food webs. Understanding the linkages between these two ecologically and culturally important ecosystems will help us to understand the potential impacts of hydrological alterations that occur when roads or bridges are constructed through them. We conducted a 15N tracer study in the Yela watershed on the island of Kosrae, Federated States of Micronesia. K15NO3 was continually added at trace levels for 4 weeks to the Yela River in an upland freshwater swamp adjacent to a mangrove forest. Nitrate and ammonium pools, major primary producers, macroinvertebrates, and fish were sampled from stations 5 m upstream (freshwater swamp) and 138, 188, 213, and 313 m downstream (mangrove) from the tracer addition. Samples were collected once a week prior to, during, and after the 15N addition for a total of 6 weeks. Preliminary results revealed no significant enrichment (< 1 ‰) in the 15N isotope composition of either resident shrimp (Macrobrachium sp.) or mudskipper fish (Periophthalmus sp.). However, the 15N signature of ammonium pools was enriched 10-60 ‰ by the end of the third week. These results suggest that the tracer was present

  12. Assessing denitrification in groundwater using natural gradient tracer tests with 15N: In situ measurement of a sequential multistep reaction

    USGS Publications Warehouse

    Smith, R.L.; Böhlke, J.K.; Garabedian, S.P.; Revesz, K.M.; Yoshinari, T.

    2004-01-01

    Denitrification was measured within a nitrate-contaminated aquifer on Cape Cod, Massachusetts, using natural gradient tracer tests with 15N nitrate. The aquifer contained zones of relatively high concentrations of nitrite (up to 77 ??M) and nitrous oxide (up to 143 ??M) and has been the site of previous studies examining ground water denitrification using the acetylene block technique. Small-scale (15-24 m travel distance) tracer tests were conducted by injecting 15N nitrate and bromide as tracers into a depth interval that contained nitrate, nitrite, nitrous oxide, and excess nitrogen gas. The timing of the bromide breakthrough curves at down-gradient wells matched peaks in 15N abundance above background for nitrate, nitrite, nitrous oxide, and nitrogen gas after more than 40 days of travel. Results were simulated with a one-dimensional transport model using linked reaction kinetics for the individual steps of the denitrification reaction pathway. It was necessary to include within the model spatial variations in background concentrations of all nitrogen oxide species. The model indicated that nitrite production (0.036-0.047 ??mol N (L aquifer)-1 d -1) was faster than the subsequent denitrification steps (0.013-0.016 ??mol N (L aquifer)-1 d-1 for nitrous oxide and 0.013-0.020 ??mol N (L aquifer)-1 d-1 for nitrogen gas) and that the total rate of reaction was slower than indicated by both acetylene block tracer tests and laboratory incubations. The rate of nitrate removal by denitrification was much slower than the rate of transport, indicating that nitrate would migrate several kilometers down-gradient before being completely consumed.

  13. Uptake of stormwater nitrogen in bioretention systems demonstrated from 15N tracer techniques

    NASA Astrophysics Data System (ADS)

    Houdeshel, D.; Hultine, K. R.; Pomeroy, C. A.

    2012-12-01

    Bioretention stormwater management systems are engineered ecosystems that capture urban stormwater in order to reduce the harmful effects of stormwater pollution on receiving waters. Bioretention systems have been shown to be effective at reducing the volume of runoff, and thereby reduce the nutrient loading to receiving waters from urban areas. However, little work has been done to evaluate the treatment processes that are responsible for reductions in effluent nitrogen (N). We hypothesize that the pulses of inorganic nitrogen associated with urban runoff events are captured in the plat tissues within these systems and not adsorbed to the soil media, thus creating a long-term, sustainable treatment approach to reducing the total nutrient loading to receiving waters. Nitrogen treatment performance was tested on two bioretention systems in Salt Lake City, UT: 1) an upland native community that does not require irrigation in semi-arid climates, and 2) a wetland community that requires 250 l of daily irrigation to offset the relatively high evaporative demand in the region. Each cell is sized to treat a 2.5 cm storm from a 140 m2 impervious surface: the area of the bioretention system is 10 m2. To test the N removal performance of each system, runoff events were simulated to represent an average precipitation regime using a synthetic stormwater blend starting in January, 2012. Effluent was collected from an underdrain and analyzed for total nitrogen (TN); mass removal was calculated for each month by subtracting the TN mass added to the garden minus the TN mass that flowed out of the garden. To test the hypothesis that plants assimilate stormwater N, 4 g of 100 atom% 15N NH4NO3 tracer was used as the N source in the synthetic stormwater during the first 2,000 l synthetic storm event in May. This isotopic label was calculated to enrich the total N pool of each garden to 100‰ 15N/14Nair. New growth was harvested from each plant in both cells and analyzed for 15N

  14. Acetylene inhibition of N2O reduction in laboratory soil and groundwater denitrification assays: evaluation by 15N tracer and 15N site preference of N2O

    NASA Astrophysics Data System (ADS)

    Weymann, Daniel; Well, Reinhard; Lewicka-Szczebak, Dominika; Lena, Rohe

    2013-04-01

    The measurement of denitrification in soils and aquifers is still challenging and often enough associated with considerable experimental effort and high costs. Against this background, the acetylene inhibition technique (AIT) applied in laboratory soil and groundwater denitrification assays is by far the most effective approach. However, this method has been largely criticized, as it is susceptible to underestimate denitrification rates and adds an additional carbon source to the substrates to be investigated. Here we provide evidence that the AIT is not necessarily an inappropriate approach to measure denitrification, that its reliability depends on the drivers governing the process, and that the 15N site preference of N2O (SP) may serve as a tool to assess this reliability. Two laboratory batch experiments were conducted, where sandy aquifer material and a peat soil were incubated as slurries. We established (i) a standard anaerobic treatment by adding KNO3 (10 mg N L-1), (ii) an oxygen treatment by adding KNO3 and O2 (5 mg L-1), and (iii) a glucose treatment by adding KNO3 supplemented with glucose (200 mg C L-1). Both experiments were run under 10 % (v/v) acetylene atmosphere and as 15N tracer treatments using labeled K15NO3 (60 atom % 15N). In the case of the standard anaerobic treatments, we found a very good agreement of denitrification potential obtained by the AIT and 15N tracer methods. SP of N2O of the AIT samples from this treatment ranged between -4.8 and 2.6 ‰ which is indicative for N2O production during bacterial denitrification but not for N2O reduction to N2. In contrast, we observed substantial underestimation of denitrification by AIT for the glucose treatments compared to the 15N method, i.e. denitrification was underestimated by 36 % (sandy aquifer material) and 47 % (peat soil). SP of N2O of the AIT samples from this treatment ranged between 4.5 and 9.6 ‰, which suggests occurrence of bacterial N2O reduction. In the case of the oxygen

  15. Compound-specific amino acid δ15N patterns in marine algae: Tracer potential for cyanobacterial vs. eukaryotic organic nitrogen sources in the ocean

    NASA Astrophysics Data System (ADS)

    McCarthy, Matthew D.; Lehman, Jennifer; Kudela, Raphael

    2013-02-01

    Stable nitrogen isotopic analysis of individual amino acids (δ15N-AA) has unique potential to elucidate the complexities of food webs, track heterotrophic transformations, and understand diagenesis of organic nitrogen (ON). While δ15N-AA patterns of autotrophs have been shown to be generally similar, prior work has also suggested that differences may exist between cyanobacteria and eukaryotic algae. However, δ15N-AA patterns in differing oceanic algal groups have never been closely examined. The overarching goals of this study were first to establish a more quantitative understanding of algal δ15N-AA patterns, and second to examine whether δ15N-AA patterns have potential as a new tracer for distinguishing prokaryotic vs. eukaryotic N sources. We measured δ15N-AA from prokaryotic and eukaryotic phytoplankton cultures and used a complementary set of statistical approaches (simple normalization, regression-derived fractionation factors, and multivariate analyses) to test for variations. A generally similar δ15N-AA pattern was confirmed for all algae, however significant AA-specific variation was also consistently identified between the two groups. The relative δ15N fractionation of Glx (glutamine + glutamic acid combined) vs. total proteinaceous N appeared substantially different, which we hypothesize could be related to differing enzymatic forms. In addition, the several other AA (most notably glycine and leucine) appeared to have strong biomarker potential. Finally, we observed that overall patterns of δ15N values in algae correspond well with the Trophic vs. Source-AA division now commonly used to describe variable AA δ15N changes with trophic transfer, suggesting a common mechanistic basis. Overall, these results show that autotrophic δ15N-AA patterns can differ between major algal evolutionary groupings for many AA. The statistically significant multivariate results represent a first approach for testing ideas about relative eukaryotic vs. prokaryotic

  16. The Five-Year Fate of a 15N Tracer in a Mixed Deciduous Forest: Retention, Redistribution, and Differences by Mycorrhizal Association

    NASA Astrophysics Data System (ADS)

    Goodale, C. L.

    2015-12-01

    The impact of nitrogen deposition on forest ecosystems depends in large part on its fate: uptake by trees can stimulate growth, while gaseous or leaching losses contribute to air and water pollution and represent the loss of a limiting nutrient. Past tracer studies have shown that soils dominate the short-term fate of added 15N, but its longer-term term fate remains uncertain. This study examined how much 15N tracer moved plant or soil pools or was lost over 5-6 years. In 2007, a 15N tracer (0.21 kg/ha as 99% enriched 15N-KNO3) was added to 0.25 ha mixed hardwood forest in central NY. All of the tracer was recovered in the days after its addition, but recovery fell to 78% by the end of this year (25% surface litter, 48% 0-10 cm soil, 5% roots). One year later, recovery in these pools fell (to 51%), with losses from surface litter (-11%) and the 0-10 cm soils (-15%), including losses from the "heavy" soil fraction. Additional tracer moved to other plant pools (+5%) and to deeper soil (+13%; up to 30 cm), for a total recovery of 69% of the added tracer. Between years 1 and 5-6, only total tracer recovery decreased by only 1.4%. Recovery decreased in foliage (-0.2%), all roots (-3.5%), and surface litter (-9.8%), while increasing in woody biomass (+0.9%), 0-10 cm soil (+8.9%), and deep soil (+2.3%; up to 50 cm). Tracer recovery in live and dead plant N pools (11%) did not change, as 3% moved from roots into aboveground plant tissues and 3% moved from live plant pools into leaf litter; these results imply no net transfer of 15N from soil to plants during this period. Over all 5-6 years, only 1.6% of the tracer moved into bark or wood, a small but important sink because of its high C:N ratio; however, roughly one-third of this total was in wood formed prior to the start of the tracer addition. Tree species differed in their recovery of 15N: the six species with ectomycorrhizal associations showed more enrichment than the four species with arbuscular mycorrhizae. It is

  17. Development and application of 15N-tracer substances for measuring the whole-body protein turnover rates in the human, especially in neonates: a review.

    PubMed

    Wutzke, Klaus D

    2012-06-01

    Our research group of the Children's Hospital of the University of Rostock (Rostock group) has long-time experience in (15)N-labelling and in using yeast protein and its hydrolysates for tracer kinetic studies to evaluate parameters of the whole-body protein metabolism in premature infants. The particular advantage of applying an economically convenient, highly (15)N-enriched, and completely labelled yeast protein for evaluating protein turnover rates is the fact that the (15)N dose is spread among all proteinogenic amino acids. The absorption has been improved by hydrolysing [(15)N]yeast protein with thermitase into a mixture of amino acids, dipeptides and tripeptides so that faecal analysis becomes unnecessary when determining turnover rates. The review shows that, in contrast to the application of single (15)N-labelled amino acids with resulting overestimation of protein turnover rates, the (15)N-labelled yeast protein thermitase hydrolysate represents the amino acid metabolism more closely without causing amino acid imbalances. The (15)N-labelled yeast protein thermitase hydrolysate leads to the estimation of reliable protein turnover rates, particularly in premature infants.

  18. Fate of nitrogen deposition and decomposed nitrogen from litter in a 15N-tracer mesocosm experiment

    NASA Astrophysics Data System (ADS)

    Nair, R.; Perks, M.; Mencuccini, M.

    2013-12-01

    Atmospheric deposition of anthropogenic-derived nitrogen may be a major driver of the 0.6-0.7 Pg y-1 increase in the carbon sink in historically N-limited northern and boreal forests, but the magnitude of its effect is still uncertain. A strong effect depends on the allocation of N to trees, because of their high C:N ratio in woody tissues, and isotope tracer experiments have shown that the majority of 15N tracers applied directly to the soil are lost via leeching or retained in soil pools rather than being acquired by tree root systems. However, ambient anthropogenic inputs of N to these systems are transported in the atmosphere and intercepted by foliage before they reach the soil system, while labelled fertilization experiments also can only explicitly trace the fate of the 15N-tracer from deposition, as opposed to changes in the fate of N from litter, where decomposition rates may be enhanced at low ambient levels of deposition, affecting the availability of N from this pool for tree nutrition. We present initial results from a potted Sitka Spruce mesocosm 15N-tracer experiment where ambient nitrogen deposition was supplemented with a minor (0.4 kg ha-1 y-1) input of additional N, applied to either the soil or the foliage. Either this deposition, or litter in the pots, was enriched in 15N, allowing the fate of the isotope from two different methods of deposition to be compared with that of nitrogen released from the litter under the deposition treatment.

  19. Backbone dynamics of barstar: a (15)N NMR relaxation study.

    PubMed

    Sahu, S C; Bhuyan, A K; Majumdar, A; Udgaonkar, J B

    2000-12-01

    Backbone dynamics of uniformly (15)N-labeled barstar have been studied at 32 degrees C, pH 6.7, by using (15)N relaxation data obtained from proton-detected 2D (1)H-(15)N NMR spectroscopy. (15)N spin-lattice relaxation rate constants (R(1)), spin-spin relaxation rate constants (R(2)), and steady-state heteronuclear (1)H-(15)N NOEs have been determined for 69 of the 86 (excluding two prolines and the N-terminal residue) backbone amide (15)N at a magnetic field strength of 14.1 Tesla. The primary relaxation data have been analyzed by using the model-free formalism of molecular dynamics, using both isotropic and axially symmetric diffusion of the molecule, to determine the overall rotational correlation time (tau(m)), the generalized order parameter (S(2)), the effective correlation time for internal motions (tau(e)), and NH exchange broadening contributions (R(ex)) for each residue. As per the axially symmetric diffusion, the ratio of diffusion rates about the unique and perpendicular axes (D( parallel)/D( perpendicular)) is 0.82 +/- 0.03. The two results have only marginal differences. The relaxation data have also been used to map reduced spectral densities for the NH vectors of these residues at three frequencies: 0, omega(H), and omega(N), where omega(H),(N) are proton and nitrogen Larmor frequencies. The value of tau(m) obtained from model-free analysis of the relaxation data is 5.2 ns. The reduced spectral density analysis, however, yields a value of 5.7 ns. The tau(m) determined here is different from that calculated previously from time-resolved fluorescence data (4.1 ns). The order parameter ranges from 0.68 to 0.98, with an average value of 0.85 +/- 0.02. A comparison of the order parameters with the X-ray B-factors for the backbone nitrogens of wild-type barstar does not show any considerable correlation. Model-free analysis of the relaxation data for seven residues required the inclusion of an exchange broadening term, the magnitude of which ranges from 2

  20. Ammonium and nitrate uptake lengths in a small forested stream determined by {sup 15}N tracer and short-term nutrient enrichment experiments

    SciTech Connect

    Mulholland, P.J.; Tank, J.L.; Sanzone, D.M.; Webster, J.R.; Wollheim, W.; Peterson, B.J.; Meyer, J.L.

    1998-11-01

    Nutrient cycling is an important characteristic of all ecosystems, including streams. Nutrients often limit the growth rates of stream algae and heterotrophic microbes and the decomposition rate of allochthonous organic matter. Nutrient uptake (S{sub W}), defined as the mean distance traveled by a nutrient atom dissolved in stream water before uptake by biota is often used as an index of nutrient cycling in streams. It is often overlooked, however, that S{sub W} is not a measure of nutrient uptake rate per se, but rather a measure of the efficiency with which a stream utilizes the available nutrient supply. The ideal method for measuring S{sub W} involves short-term addition of a nutrient tracer. Regulatory constraints often preclude use of nutrient radiotracers in field studies and methodological difficulties and high analytical costs have previously hindered the use of stable isotope nutrient tracers (e.g., {sup 15}N). Short-term nutrient enrichments are an alternative to nutrient tracer additions for measuring S{sub W}.

  1. Multi-Isotope Secondary Ion Mass Spectrometry Combining Heavy Water 2H with 15N Labeling As Complementary Tracers for Metabolic Heterogeneity at the Single-Cell Level

    NASA Astrophysics Data System (ADS)

    Kopf, S.; McGlynn, S.; Cowley, E.; Green, A.; Newman, D. K.; Orphan, V. J.

    2014-12-01

    Metabolic rates of microbial communities constitute a key physiological parameter for understanding the in situ growth constraints for life in any environment. Isotope labeling techniques provide a powerful approach for measuring such biological activity, due to the use of isotopically enriched substrate tracers whose incorporation into biological materials can be detected with high sensitivity by isotope-ratio mass spectrometry. Nano-meter scale secondary ion mass spectrometry (NanoSIMS) combined with stable isotope labeling provides a unique tool for studying the spatiometabolic activity of microbial populations at the single cell level in order to assess both community structure and population diversity. However, assessing the distribution and range of microbial activity in complex environmental systems with slow-growing organisms, diverse carbon and nitrogen sources, or heterotrophic subpopulations poses a tremendous technical challenge because the introduction of isotopically labeled substrates frequently changes the nutrient availability and can inflate or bias measures of activity. Here, we present the use of hydrogen isotope labeling with deuterated water as an important new addition to the isotopic toolkit and apply it for the determination of single cell microbial activities by NanoSIMS imaging. This tool provides a labeling technique that minimally alters any aquatic chemical environment, can be administered with strong labels even in minimal addition (natural background is very low), is an equally universal substrate for all forms of life even in complex, carbon and nitrogen saturated systems, and can be combined with other isotopic tracers. The combination of heavy water labeling with the most commonly used NanoSIMS tracer, 15N, is technically challenging but opens up a powerful new set of multi-tracer experiments for the study of microbial activity in complex communities. We present the first truly simultaneous single cell triple isotope system

  2. Denitrification in nitrate-rich streams: Application of N2:Ar and 15N-tracer methods in intact cores

    USGS Publications Warehouse

    Smith, L.K.; Voytek, M.A.; Böhlke, J.K.; Harvey, J.W.

    2006-01-01

    Rates of benthic denitrification were measured using two techniques, membrane inlet mass spectrometry (MIMS) and isotope ratio mass spectrometry (IRMS), applied to sediment cores from two NO3--rich streams draining agricultural land in the upper Mississippi River Basin. Denitrification was estimated simultaneously from measurements of N 2:Ar (MIMS) and 15N[N2] (IRMS) after the addition of low-level 15NO3- tracer ( 15N:N = 0.03-0.08) in stream water overlying intact sediment cores. Denitrification rates ranged from about 0 to 4400 lmol N??m -2??h-1 in Sugar Creek and from 0 to 1300 ??mol N??m-2??h-1 in Iroquois River, the latter of which possesses greater streamflow discharge and a more homogeneous streambed and water column. Within the uncertainties of the two techniques, there is good agreement between the MIMS and IRMS results, which indicates that the production of N2 by the coupled process of nitrification/denitrification was relatively unimportant and surface-water NO3- was the dominant source of NO3- for benthic denitrification in these streams. Variation in stream NO3- concentration (from about 20 ??mol/L during low discharge to 1000 ??mol/L during high discharge) was a significant control of benthic denitrification rates, judging from the more abundant MIMS data. The interpretation that NO3- concentration directly affects denitrification rate was corroborated by increased rates of denitrification in cores amended with NO 3-. Denitrification in Sugar Creek removed ???11% per day of the instream NO3- in late spring and removed roughly 15-20% in late summer. The fraction of NO3- removed in Iroquois River was less than that of Sugar Creek. Although benthic denitrification rates were relatively high during periods of high stream flow, when NO3 concentrations were also high, the increase in benthic denitrification could not compensate for the much larger increase in stream NO3- fluxes during high flow. Consequently, fractional NO3- losses were relatively low

  3. A novel 15N tracer approach for the quantification of N2 and N2O emissions from soil incubations in a completely automated laboratory set up

    NASA Astrophysics Data System (ADS)

    Scheer, Clemens; Dannenmann, Michael; Meier, Rudolf

    2015-04-01

    The microbial mediated production of nitrous oxide (N2O) and its reduction to dinitrogen (N2) via denitrification represents a loss of nitrogen (N) from fertilised agro-ecosystems to the atmosphere. Although denitrification has received great interest by biogeochemists in the last decades, the magnitude of N2lossesand related N2:N2O ratios from soils still are largely unknown due to methodical constraints. We present a novel 15N tracer approach, based on a previous developed tracer method to study denitrification in pure bacterial cultures which was modified for the use on soil incubations in a completely automated laboratory set up. The method uses a background air in the incubation vessels that is replaced with a helium-oxygen gas mixture with a 50-fold reduced N2 background (2 % v/v). This method allows for a direct and sensitive quantification of the N2 and N2O emissions from the soil with isotope-ratio mass spectrometry after 15N labelling of denitrification N substrates and minimises the sensitivity to the intrusion of atmospheric N2 at the same time. The incubation set up was used to determine the influence of different soil moisture levels on N2 and N2O emissions from a sub-tropical pasture soil in Queensland/Australia. The soil was labelled with an equivalent of 50 μg-N per gram dry soil by broadcast application of KNO3solution (4 at.% 15N) and incubated for 3 days at 80% and 100% water filled pore space (WFPS), respectively. The headspace of the incubation vessel was sampled automatically over 12hrs each day and 3 samples (0, 6, and 12 hrs after incubation start) of headspace gas analysed for N2 and N2O with an isotope-ratio mass spectrometer (DELTA V Plus, Thermo Fisher Scientific, Bremen, Germany(. In addition, the soil was analysed for 15N NO3- and NH4+ using the 15N diffusion method, which enabled us to obtain a complete N balance. The method proved to be highly sensitive for N2 and N2O emissions detecting N2O emissions ranging from 20 to 627 μN kg

  4. Nitrogen limitation, 15N tracer retention, and growth response in intact and Bromus tectorum-invaded Artemisia tridentata ssp. wyomingensis communities

    USGS Publications Warehouse

    Witwicki, Dana L.; Doescher, Paul S.; Pyke, David A.; DeCrappeo, Nicole M.; Perakis, Steven S.

    2012-01-01

    Annual grass invasion into shrub-dominated ecosystems is associated with changes in nutrient cycling that may alter nitrogen (N) limitation and retention. Carbon (C) applications that reduce plant-available N have been suggested to give native perennial vegetation a competitive advantage over exotic annual grasses, but plant community and N retention responses to C addition remain poorly understood in these ecosystems. The main objectives of this study were to (1) evaluate the degree of N limitation of plant biomass in intact versus B. tectorum-invaded sagebrush communities, (2) determine if plant N limitation patterns are reflected in the strength of tracer 15N retention over two growing seasons, and (3) assess if the strength of plant N limitation predicts the efficacy of carbon additions intended to reduce soil N availability and plant growth. Labile C additions reduced biomass of exotic annual species; however, growth of native A. tridentata shrubs also declined. Exotic annual and native perennial plant communities had divergent responses to added N, with B. tectorum displaying greater ability to use added N to rapidly increase aboveground biomass, and native perennials increasing their tissue N concentration but showing little growth response. Few differences in N pools between the annual and native communities were detected. In contrast to expectations, however, more 15N was retained over two growing seasons in the invaded annual grass than in the native shrub community. Our data suggest that N cycling in converted exotic annual grasslands of the northern Intermountain West, USA, may retain N more strongly than previously thought.

  5. 15N tracer application to evaluate nitrogen dynamics of food webs in two subtropical small-scale aquaculture ponds under different managements.

    PubMed

    Pucher, Johannes; Mayrhofer, Richard; El-Matbouli, Mansour; Focken, Ulfert

    2014-01-01

    Small, semi-intensively managed aquaculture ponds contribute significantly to the food security of small-scale farmers around the world. However, little is known about nutrient flows within natural food webs in such ponds in which fish production depends on the productivity of natural food resources. (15)N was applied as ammonium at 1.1 and 0.4 % of total nitrogen in a traditionally managed flow-through pond and a semi-intensively managed stagnant pond belonging to small-scale farmers in Northern Vietnam and traced through the natural food resources over 7 days. Small-sized plankton (1-60 μ m) was the dominant pelagic biomass in both ponds with higher biomass in the stagnant pond. This plankton assimilated major portions of the applied tracer and showed a high sedimentation and turnover rate. High re-activation of settled nutrients into the pelagic food web was observed. The tracer was removed more quickly from the flow-through pond than from the stagnant pond. A steady nutrient supply could increase fish production. PMID:24995524

  6. 15N tracer application to evaluate nitrogen dynamics of food webs in two subtropical small-scale aquaculture ponds under different managements.

    PubMed

    Pucher, Johannes; Mayrhofer, Richard; El-Matbouli, Mansour; Focken, Ulfert

    2014-01-01

    Small, semi-intensively managed aquaculture ponds contribute significantly to the food security of small-scale farmers around the world. However, little is known about nutrient flows within natural food webs in such ponds in which fish production depends on the productivity of natural food resources. (15)N was applied as ammonium at 1.1 and 0.4 % of total nitrogen in a traditionally managed flow-through pond and a semi-intensively managed stagnant pond belonging to small-scale farmers in Northern Vietnam and traced through the natural food resources over 7 days. Small-sized plankton (1-60 μ m) was the dominant pelagic biomass in both ponds with higher biomass in the stagnant pond. This plankton assimilated major portions of the applied tracer and showed a high sedimentation and turnover rate. High re-activation of settled nutrients into the pelagic food web was observed. The tracer was removed more quickly from the flow-through pond than from the stagnant pond. A steady nutrient supply could increase fish production.

  7. Hydrogen Bonds in Crystalline Imidazoles Studied by 15N NMR and ab initio MO Calculations

    NASA Astrophysics Data System (ADS)

    Ueda, Takahiro; Nagatomo, Shigenori; Masui, Hirotsugu; Nakamura, Nobuo; Hayashi, Shigenobu

    1999-07-01

    Intermolecular hydrogen bonds of the type N-H...N in crystals of imidazole and its 4-substituted and 4,5-disubstituted derivatives were studied by 15N CP/MAS NMR and an ab initio molecular orbital (MO) calculation. In the 15N CP/MAS NMR spectrum of each of the imidazole derivatives, two peaks due to the two different functional groups, >NH and =N-, were observed. The value of the 15N isotropic chemical shift for each nitrogen atom depends on both the length of the intermolecular hydrogen bond and the kind of the substituent or substituents. It was found that the difference between the experimen-tal chemical shifts of >NH and =N-varies predominantly with the hydrogen bond length but does not show any systematic dependence on the kind of substituent. The ab initio MO calculations suggest that the hydrogen bond formation influences the 15N isotropic chemical shift predominantly, and that the difference between the 15N isotropic chemical shift of >NH and =N-varies linearly with the hydrogen bond length.

  8. Improving water use efficiency of wheat (triticum aestivum l. Giza 168) crop using 15N tracer technique under Egyptian environment

    NASA Astrophysics Data System (ADS)

    Refaie Emara, Eman Ibrahim; Hamed, Lamy Mamdoh Mohamed; Bocchi, Stefano; Galal, Yehia

    2015-04-01

    The Mediterranean environment is characterized by low and erratic rainfall amount which varies between (200-600 mm.year-1), and characterized also by high temperature which increase the rate of evapotranspiration from the cultivated soil. Under these conditions which have a great influence on crop production, there is a great needing to increase the crop water use efficiency. In this context, two field experiments were carried out in northern Cairo-Egypt, during November and December 2012 and April 2013, with two different textured soils. The soil in the first location (30° 16' N latitude, 30° 56' E longitude) is clay soil, while in the second one (30° 24' N latitude, 31° 35' E longitude) is sandy soil. The interaction effect of soil types, soil water regimes, nitrogen fertilizer application rates and timing on nitrogen balance of soil were studied, in terms of nitrogen gained by plant portions, remained in soil and losses through different ways for the wheat crop (Triticum aestivum L. Giza 168). The aim of this research is to increase the water use efficiency of wheat crop, in addition to identify the most proper and effective combinations of above-studied variables that provide a satisfactory grain wheat yield and finally to minimize the use of chemical nitrogen fertilizers. Three water regimes (100%, 75% and 50% of crop water requirements) using drip irrigation system and the application methods of Nitrogen rates, 100%, 80% and 60% of recommended rates, which are 178 Kg of Nitrogen for the clay soil and 238 Kg of Nitrogen for sandy soil, were applied to the two experimental fields. Ineed, two modes of agricultural management, mode A and B, were applied. Each mode is different than the other in terms of seedling and tillering practices, where mode A performed with 25% at seedling, 25% at tillering and 50% at jointing while mode B performed with 35% at seedling and 65% at tillering. The greatest limitation to growth and Nitrogen use efficiency was the amount

  9. Following Footsteps: ECD Tracer Studies.

    ERIC Educational Resources Information Center

    Smale, Jim, Editor

    2002-01-01

    This document consists of the single 2002 issue of The Bernard van Leer Foundation's "Early Childhood Matters," a periodical addressed to practitioners in the field of early childhood education and including information on projects funded by the Foundation. Articles in this issue focus on early childhood development tracer studies of former…

  10. Relative Magnitude and Controls of in Situ N2 and N2O Fluxes due to Denitrification in Natural and Seminatural Terrestrial Ecosystems Using (15)N Tracers.

    PubMed

    Sgouridis, Fotis; Ullah, Sami

    2015-12-15

    Denitrification is the most uncertain component of the nitrogen (N) cycle, hampering our ability to assess its contribution to reactive N (Nr) removal. This uncertainty emanates from the difficulty in measuring in situ soil N2 production and from the high spatiotemporal variability of the process itself. In situ denitrification was measured monthly between April 2013 and October 2014 in natural (organic and forest) and seminatural ecosystems (semi-improved and improved grasslands) in two UK catchments. Using the (15)N-gas flux method with low additions of (15)NO3(-) tracer, a minimum detectable flux rate of 4 μg N m(-2) h(-1) and 0.2 ng N m(-2) h(-1) for N2 and N2O, respectively, was achieved. Denitrification rates were lower in organic and forest (8 and 10 kg N ha(-1) y(-1), respectively) than in semi-improved and improved grassland soils (13 and 25 kg N ha(-1) y(-1), respectively). The ratio of N2O/N2 + N2O was low and ranged from <1% to 7% across the sites. Variation in denitrification was driven by differences in soil respiration, nitrate, C:N ratio, bulk density, moisture, and pH across the sites. Overall, the contribution of denitrification to Nr removal in natural ecosystems was ~50% of the annual atmospheric Nr deposition, making these ecosystems vulnerable to chronic N saturation.

  11. Assessing waterbird habitat use in coastal evaporative systems using stable isotopes (δ 13C, δ 15N and δD) as environmental tracers

    NASA Astrophysics Data System (ADS)

    Ramírez, Francisco; Abdennadher, Aida; Sanpera, Carola; Jover, Lluís; Wassenaar, Leonard I.; Hobson, Keith A.

    2011-04-01

    Isotopic patterns of biota across salinity gradients in man-made evaporative systems could assist in determining the use of these habitats by animals. Here we report δ 13C, δ 15N and δD measurements of a euryhaline fish, the Mediterranean toothcarp ( Aphanius fasciatus), inhabiting a range of salinities in the Thyna saltworks near Sfax (Tunisia). The contribution of these salinity niches to egg formation of two typically piscivorous bird species breeding in the area and feeding within saltworks, Little Tern ( Sternula albifrons) and Little Egret ( Egretta garzetta), was inferred trough a triple-isotope (δ 13C, δ 15N and δD) Bayesian mixing model. Isotopic trends for fish δ 15N and δD across the salinity gradient followed the equations: δ 15N = e (1.1 + 47.68/Salinity) and δD = -175.74 + Salinity + Salinity 2; whereas fish δ 13C increased as salinity rose (δ 13C = -10.83 + 0.02·Salinity), after a sudden drop in fish isotopic values for salinities >60 (Practical Salinity Scale) (average fish δ 13C for salinities <60 = -5.92‰). Both bird species fed largely on low hypersalinity ponds (salinity = 43; average contribution = 37% and 22% for Little Egrets and Little Terns, respectively), although the use of intermediate hypersalinities (salinities 63 and 70) by Little Terns also occurred (16% and 21%, respectively). Isotopic patterns across salinity gradients allow the use of isotopic measurements to inform studies of habitat occupancy within evaporative systems and provide further insights into how wildlife communities interact with them.

  12. The use of δ15N and δ18O tracers with an understanding of groundwater flow dynamics for evaluating the origins and attenuation mechanisms of nitrate pollution.

    PubMed

    Hosono, Takahiro; Tokunaga, Takahiro; Kagabu, Makoto; Nakata, Haruhiko; Orishikida, Takanori; Lin, In-Tian; Shimada, Jun

    2013-05-15

    During early 2000, a new analytical procedure for nitrate isotopic measurement, termed the "denitrifier method", was established. With the development of the nitrate isotope tracer method, much research has been reported detailing sources of groundwater nitrate and denitrification mechanisms. However, a shortcoming of these tracer studies has been indicated owing to some overlapping of isotope compositions among different source materials and denitrification trends. In order to reduce these uncertainties, we examined nitrate isotope ratios within a frame of "regional groundwater flow dynamics" to eliminate unnecessary uncertainties in elucidating nitrate sources and behaviors. A total of 361 samples were collected from the Kumamoto area: the circulated groundwater system with a scale of 10(3) km(2) in southern Japan. Subsequently, the nitrate pollution was examined within the above-mentioned framework. As a result, a reasonable identification of the sources and attenuation behaviors (both denitrification and dilution) of groundwater nitrate pollution was obtained over the study area. This study demonstrates that the use of nitrate isotope tracers efficiently improves with a comprehensive understanding of groundwater flow dynamics. The approach emphasized in this study is important and should be applicable in other areas.

  13. Non-homogeneity of isotopic labelling in 15N gas flux studies: theory, some observations and possible lessons

    NASA Astrophysics Data System (ADS)

    Well, Reinhard; Buchen, Caroline; Deppe, Marianna; Eschenbach, Wolfram; Gattinger, Andreas; Giesemann, Anette; Krause, Hans-Martin; Lewicka-Szczebak, Dominika

    2015-04-01

    Quantifying dinitrogen (N2) and nitrous oxide (N2O) fluxes from different soil N pools and processes can be accomplished using the 15N tracer technique but this is subject to four different sources of bias (i. - iv.). This approach includes 15N labelling of selected N pools in soil and subsequent isotope analysis of all relevant N pools as well as of gas samples from enclosures, i.e. mixtures of soil-derived and atmospheric N2 and N2O. Depending on the processes of interest, there may be 15N labelling of one or several N pools, were several labelling treatment are needed in the latter case (e.g. Müller et al., 2004). Measuring pool-derived N2 or N2O has been shown to include two calculation problems, (i.) arising from multiple pools (e.g. Arah, 1992) and (ii.) dealing with the non-random distribution of N2 and N2O mole masses (Hauck et al., 1958). Non-randomness can be solved if m/z 28, 29 and 30 are correctly analysed and the 15N enrichment of one (to distinguish two pools, i.e. soil and atmosphere) or two pools (in case of three pools) is known (Spott & Stange, 2008). Moreover (iii.), NO3- pools generating N2 and N2O via denitrification can be identical or different, e.g. if N2O evolved from higher enriched NO3- in deeper soil was more reduced to N2 compared to N2O evolved from N2O from shallow soil with lower enrichment, or vice versa. Apportioning N2O fluxes to NH4+ (nitrification and/or nitrifier denitrification) and NO3- (denitrification) is often conducted by NO3-labeling, measuring δ15N of emitted N2O and applying mixing equations were the measured 15N enrichment of NH4+and NO3-pool is used. However, this assumes that the average 15N enrichment of NH4+and NO3-in the soil is identical to the enrichment in the active soil domain producing N2 and/or N2O. Violation of this precondition must lead to bias in source apportionment (iv.), but to our knowledge this has not been investigated until now. Here we present conceptual models and model calculations

  14. UV-visible and (1)H-(15)N NMR spectroscopic studies of colorimetric thiosemicarbazide anion sensors.

    PubMed

    Farrugia, Kristina N; Makuc, Damjan; Podborska, Agnieszka; Szaciłowski, Konrad; Plavec, Janez; Magri, David C

    2015-02-14

    Four model thiosemicarbazide anion chemosensors containing three N-H bonds, substituted with phenyl and/or 4-nitrophenyl units, were synthesised and studied for their anion binding abilities with hydroxide, fluoride, acetate, dihydrogen phosphate and chloride. The anion binding properties were studied in DMSO and 9 : 1 DMSO-H2O by UV-visible absorption and (1)H/(13)C/(15)N NMR spectroscopic techniques and corroborated with DFT studies. Significant changes were observed in the UV-visible absorption spectra with all anions, except for chloride, accompanied by dramatic colour changes visible to the naked eye. These changes were determined to be due to the deprotonation of the central N-H proton and not due to hydrogen bonding based on (1)H/(15)N NMR titration studies with acetate in DMSO-d6-0.5% water. Direct evidence for deprotonation was confirmed by the disappearance of the central thiourea proton and the formation of acetic acid. DFT and charge distribution calculations suggest that for all four compounds the central N-H proton is the most acidic. Hence, the anion chemosensors operate by a deprotonation mechanism of the central N-H proton rather than by hydrogen bonding as is often reported. PMID:25451865

  15. Covalent binding of aniline to humic substances. 2. 15N NMR studies of nucleophilic addition reactions

    USGS Publications Warehouse

    Thorn, K.A.; Pettigrew, P.J.; Goldenberg, W.S.; Weber, E.J.

    1996-01-01

    Aromatic amines are known to undergo covalent binding with humic substances in the environment. Although previous studies have examined reaction conditions and proposed mechanisms, there has been no direct spectroscopic evidence for the covalent binding of the amines to the functional groups in humic substances. In order to further elucidate the reaction mechanisms, the Suwannee River and IHSS soil fulvic and humic acids were reacted with 15N-labeled aniline at pH 6 and analyzed using 15N NMR spectrometry. Aniline underwent nucleophilic addition reactions with the quinone and other carbonyl groups in the samples and became incorporated in the form of anilinohydroquinone, anilinoquinone, anilide, imine, and heterocyclic nitrogen, the latter comprising 50% or more of the bound amine. The anilide and anilinohydroquinone nitrogens were determined to be susceptible to chemical exchange by ammonia. In the case of Suwannee River fulvic acid, reaction under anoxic conditions and pretreatment with sodium borohydride or hydroxylamine prior to reaction under oxic conditions resulted in a decrease in the proportion of anilinohydroquinone nitrogen incorporated. The relative decrease in the incorporation of anilinohydroquinone nitrogen with respect to anilinoquinone nitrogen under anoxic conditions suggested that inter- or intramolecular redox reactions accompanied the nucleophilic addition reactions.

  16. Protein Retention Assessment of Four Levels of Poultry By-Product Substitution of Fishmeal in Rainbow Trout (Oncorhynchus mykiss) Diets Using Stable Isotopes of Nitrogen (δ15N) as Natural Tracers

    PubMed Central

    Badillo, Daniel; Herzka, Sharon Z.; Viana, Maria Teresa

    2014-01-01

    This is second part from an experiment where the nitrogen retention of poultry by-product meal (PBM) compared to fishmeal (FM) was evaluated using traditional indices. Here a quantitative method using stable isotope ratios of nitrogen (δ15N values) as natural tracers of nitrogen incorporation into fish biomass is assessed. Juvenile rainbow trout (Oncorhynchus mykiss) were fed for 80 days on isotopically distinct diets in which 0, 33, 66 and 100% of FM as main protein source was replaced by PBM. The diets were isonitrogenous, isolipidic and similar in gross energy content. Fish in all treatments reached isotopic equilibrium by the end of the experiment. Two-source isotope mixing models that incorporated the isotopic composition of FM and PBM as well as that of formulated feeds, empirically derived trophic discrimination factors and the isotopic composition of fish that had reached isotopic equilibrium to the diets were used to obtain a quantitative estimate of the retention of each source of nitrogen. Fish fed the diets with 33 and 66% replacement of FM by PBM retained poultry by-product meal roughly in proportion to its level of inclusion in the diets, whereas no differences were detected in the protein efficiency ratio. Coupled with the similar biomass gain of fishes fed the different diets, our results support the inclusion of PBM as replacement for fishmeal in aquaculture feeds. A re-feeding experiment in which all fish were fed a diet of 100% FM for 28 days indicated isotopic turnover occurred very fast, providing further support for the potential of isotopic ratios as tracers of the retention of specific protein sources into fish tissues. Stable isotope analysis is a useful tool for studies that seek to obtain quantitative estimates of the retention of different protein sources. PMID:25226392

  17. Nanoscale studies of cement chemistry with 15N resonance reaction analysis

    NASA Astrophysics Data System (ADS)

    Schweitzer, Jeffrey S.; Livingston, Richard A.; Rolfs, Claus; Becker, Hans-Werner; Kubsky, Stefan; Spillane, Timothy; Castellote, Marta; de Viedma, Paloma G.

    2005-12-01

    Analyses of materials with ion beams have proven to be a valuable technique for describing the spatial distributions of specific elements in host materials. We have applied this technique using the 15N(p, αγ)12C reaction to study the time dependence of the chemical reactions involved in the curing of cement. By using the Dynamitron Tandem accelerator at the Ruhr Universität, Bochum, Germany, we have been able to achieve a few nanometer spatial resolution at the surface of cement grains and to study the hydrogen distributions to a depth of about 2 μm. By applying a technique for stopping the chemical reactions at arbitrary times, the time dependence of the chemical reactions involving specific components of cement can be investigated. In addition, the effects of additives on the chemical reactions have been studied, as have materials that are components of concrete.

  18. Accessible NMR Experiments Studying the Hydrodynamics of [subscript 15]N-Enriched Ubiquitin at Low Fields

    ERIC Educational Resources Information Center

    Thompson, Laura E.; Rovnyak, David

    2007-01-01

    We have recently developed and implemented two experiments in biomolecular NMR for an undergraduate-level biophysical chemistry laboratory with commercially available [subscript 15]N-enriched human ubiquitin. These experiments take advantage of [subscript 15]N direct detection of the NMR signal. The first experiment develops skills in acquiring…

  19. Accessible NMR Experiments Studying the Hydrodynamics of [superscript 15]N-Enriched Ubiquitin at Low Fields

    ERIC Educational Resources Information Center

    Thompson, Laura E.; Rovnyak, David

    2007-01-01

    We have recently developed and implemented two experiments in biomolecular NMR for an undergraduate-level biophysical chemistry laboratory with commercially available [superscript 15]N-enriched human ubiquitin. These experiments take advantage of [superscript 15]N direct detection of the NMR signal. The first experiment develops skills in…

  20. Tracing the Cycling and Fate of the Explosive 2,4,6-Trinitrotoluene in Coastal Marine Systems with a Stable Isotopic Tracer, (15)N-[TNT].

    PubMed

    Smith, Richard W; Vlahos, Penny; Böhlke, J K; Ariyarathna, Thivanka; Ballentine, Mark; Cooper, Christopher; Fallis, Stephen; Groshens, Thomas J; Tobias, Craig

    2015-10-20

    2,4,6-Trinitrotoluene (TNT) has been used as a military explosive for over a hundred years. Contamination concerns have arisen as a result of manufacturing and use on a large scale; however, despite decades of work addressing TNT contamination in the environment, its fate in marine ecosystems is not fully resolved. Here we examine the cycling and fate of TNT in the coastal marine systems by spiking a marine mesocosm containing seawater, sediments, and macrobiota with isotopically labeled TNT ((15)N-[TNT]), simultaneously monitoring removal, transformation, mineralization, sorption, and biological uptake over a period of 16 days. TNT degradation was rapid, and we observed accumulation of reduced transformation products dissolved in the water column and in pore waters, sorbed to sediments and suspended particulate matter (SPM), and in the tissues of macrobiota. Bulk δ(15)N analysis of sediments, SPM, and tissues revealed large quantities of (15)N beyond that accounted for in identifiable derivatives. TNT-derived N was also found in the dissolved inorganic N (DIN) pool. Using multivariate statistical analysis and a (15)N mass balance approach, we identify the major transformation pathways of TNT, including the deamination of reduced TNT derivatives, potentially promoted by sorption to SPM and oxic surface sediments.

  1. Tracing the Cycling and Fate of the Explosive 2,4,6-Trinitrotoluene in Coastal Marine Systems with a Stable Isotopic Tracer, (15)N-[TNT].

    PubMed

    Smith, Richard W; Vlahos, Penny; Böhlke, J K; Ariyarathna, Thivanka; Ballentine, Mark; Cooper, Christopher; Fallis, Stephen; Groshens, Thomas J; Tobias, Craig

    2015-10-20

    2,4,6-Trinitrotoluene (TNT) has been used as a military explosive for over a hundred years. Contamination concerns have arisen as a result of manufacturing and use on a large scale; however, despite decades of work addressing TNT contamination in the environment, its fate in marine ecosystems is not fully resolved. Here we examine the cycling and fate of TNT in the coastal marine systems by spiking a marine mesocosm containing seawater, sediments, and macrobiota with isotopically labeled TNT ((15)N-[TNT]), simultaneously monitoring removal, transformation, mineralization, sorption, and biological uptake over a period of 16 days. TNT degradation was rapid, and we observed accumulation of reduced transformation products dissolved in the water column and in pore waters, sorbed to sediments and suspended particulate matter (SPM), and in the tissues of macrobiota. Bulk δ(15)N analysis of sediments, SPM, and tissues revealed large quantities of (15)N beyond that accounted for in identifiable derivatives. TNT-derived N was also found in the dissolved inorganic N (DIN) pool. Using multivariate statistical analysis and a (15)N mass balance approach, we identify the major transformation pathways of TNT, including the deamination of reduced TNT derivatives, potentially promoted by sorption to SPM and oxic surface sediments. PMID:26375037

  2. Application of (15)N- (18)O double stable isotope tracer technique in an agricultural nonpoint polluted river of the Yangtze Delta Region.

    PubMed

    Liang, X Q; Nie, Z Y; He, M M; Guo, R; Zhu, C Y; Chen, Y X; Stephan, Küppers

    2013-10-01

    One strategy to combat nitrate (NO3-N) contamination in rivers is to understand its sources. NO3-N sources in the East Tiaoxi River of the Yangtze Delta Region were investigated by applying a (15)N-(18)O dual isotope approach. Water samples were collected from the main channel and from the tributaries. Results show that high total N and NO3-N are present in both the main channel and the major tributaries, and NO3-N was one of the most important N forms in water. Analysis of isotopic compositions (δ (18)O, δD) of water suggests that the river water mainly originated from three tributaries during the sampling period. There was a wide range of δ (15)N-NO3 (-1.4 to 12.4 ‰) and a narrow range of δ (18)O-NO3 (3.7 to 9.0 ‰) in the main channel waters. The δ (15)N and δ (18)O-NO3 values in the upper, middle, and lower channels along the river were shifted as 8.2, 3.5, and 9.5 ‰, and 9.0, 4.2, and 6.0 ‰, respectively. In the tributary South Tiao, the δ (15)N and δ (18)O-NO3 values were as high as 9.5 and 7.0 ‰, while in the tributaries Mid Tiao and North Tiao, NO3-N in most of the samples had relatively low δ (15)N and δ (18)O-NO3 values from 2.3 to 7.5 ‰ and 4.7 to 7.0 ‰, separately. Our results also suggest that the dual isotope approach can help us develop the best management practice for relieving NO3-N pollution in the rivers at the tributary scale.

  3. Tracer studies on an aerated lagoon.

    PubMed

    Broughton, Alistair; Shilton, Andy

    2012-01-01

    The city of Palmerston North, New Zealand, has two aerated lagoons as its secondary treatment facility. Interest about treatment efficiency led to an investigation into the hydraulics in the second lagoon to determine if further optimisation was viable. A tracer study using rhodamine WT was undertaken to ascertain the stimulus response output. Samples were also taken at 24 points within the lagoon to determine the tracer concentration profile throughout the lagoon. The mean residence time was determined to be 39.9 h compared with a theoretical residence time of 55.4 h. Peak concentration of the tracer at the outlet occurred at 0.44 of the mean residence time. The results of the tracer study pointed to 28% of volume being dead space. A subsequent sludge survey indicated that 26% of the design volume of the lagoon was filled with sludge. While the curved geometry of the lagoon did not appear to impact the hydraulics the fact that the first aerator is confined in a relatively smaller area will have locally boosted the mixing energy input in this inlet zone. From interpretation of the tracer response and the tracer distribution profiles it appears that the aerators are mixing the influent into the bulk flow effectively in the front end of the lagoon and that there was no evidence of any substantive short-circuiting path of concentrated tracer around to the outlet. The tracer distribution profiles gave direct insight as to how the tracer was being transported within the pond and should be used more often when conducting tracer studies. Comparison with the literature indicated that the lagoon's hydraulic efficiency was on par with a baffled pond system and it would be expected that addition of several baffles to the lagoon would provide minimal further improvement. PMID:22277219

  4. Natural-abundance 15N NMR studies of Turkey ovomucoid third domain. Assignment of peptide 15N resonances to the residues at the reactive site region via proton-detected multiple-quantum coherence

    NASA Astrophysics Data System (ADS)

    Ortiz-Polo, Gilberto; Krishnamoorthi, R.; Markley, John L.; Live, David H.; Davis, Donald G.; Cowburn, David

    Heteronuclear two-dimensional 1H{ 15N} multiple-quantum (MQ) spectroscopy has been applied to a protein sample at natural abundance: ovomucoid third domain from turkey ( Meleagris gallopavo), a serine proteinase inhibitor of 56 amino acid residues. Peptide amide 1H NMR assignments obtained by two-dimensional 1H{ 1H} NMR methods (R. Krishnamoorthi and J. L. Markley, unpublished data) led to identification of the corresponding 1H{ 15N} MQ coherence cross peaks. From these, 15N NMR chemical shifts were determined for several specific backbone amide groups of amino acid residues located around the reactive site region of the inhibitor. The results suggest that amide 15N chemical shifts, which are readily obtained in this way, may serve as sensitive probes for conformational studies of proteins.

  5. Potential probe for examining opiate-receptor interactions: model compound study of dynamic effects on /sup 15/N INEPT enhancements

    SciTech Connect

    Schilling, K.H.; Mikita, M.A.

    1987-10-01

    Model systems were chosen in an attempt to mimic the proton exchange environment of an agonist nitrogen in an opiate-receptor interaction. The two model systems studied were an ammonium: 18-crown-6 ether complex and a quinuclidine-trifluoroacetic acid ion pair. Each system was examined for their effects on /sup 15/N NMR INEPT enhancements. Both models were found to retard proton exchange dynamics, as observed by increased enhancements relative to free ions in neutral aqueous solutions. These results suggest that the confinement of a protonated nitrogen, such as that expected in receptor binding, may alter exchange dynamics to favor INEPT enhancements, while unbound agonists would remain unenhanced. As a result, /sup 15/N NMR INEPT enhancements from a solution of receptor subtypes with an appropriate /sup 15/N-labeled agonist may present a means of exploring the dynamics of direct opiate-receptor interactions.

  6. Catalytic Roles of βLys87 in Tryptophan Synthase: 15N Solid State NMR Studies

    PubMed Central

    Caulkins, Bethany G.; Yang, Chen; Hilario, Eduardo; Fan, Li; Dunn, Michael F.; Mueller, Leonard J.

    2015-01-01

    The proposed mechanism for tryptophan synthase shows βLys87 playing multiple catalytic roles: it bonds to the PLP cofactor, activates C4′ for nucleophilic attack via a protonated Schiff base nitrogen, and abstracts and returns protons to PLP-bound substrates (i.e. acid-base catalysis). ε-15N-lysine TS was prepared to access the protonation state of βLys87 using 15N solid-state nuclear magnetic resonance (SSNMR) spectroscopy for three quasi-stable intermediates along the reaction pathway. These experiments establish that the protonation state of the ε-amino group switches between protonated and neutral states as the β-site undergoes conversion from one intermediate to the next during catalysis, corresponding to mechanistic steps where this lysine residue has been anticipated to play alternating acid and base catalytic roles that help steer reaction specificity in tryptophan synthase catalysis. PMID:25688830

  7. Symbiotic N2-Fixation Estimated by the 15N Tracer Technique and Growth of Pueraria phaseoloides (Roxb.) Benth. Inoculated with Bradyrhizobium Strain in Field Conditions

    PubMed Central

    Sarr, Papa Saliou; Okon, Judith Wase; Begoude, Didier Aime Boyogueno; Araki, Shigeru; Ambang, Zachée; Shibata, Makoto; Funakawa, Shinya

    2016-01-01

    This field experiment was established in Eastern Cameroon to examine the effect of selected rhizobial inoculation on N2-fixation and growth of Pueraria phaseoloides. Treatments consisted of noninoculated and Bradyrhizobium yuanmingense S3-4-inoculated Pueraria with three replications each. Ipomoea batatas as a non-N2-fixing reference was interspersed in each Pueraria plot. All the twelve plots received 2 gN/m2 of 15N ammonium sulfate 10% atom excess. At harvest, dry matter yields and the nitrogen derived from atmospheric N2-fixation (%Ndfa) of inoculated Pueraria were significantly (P < 0.05) higher (81% and 10.83%, resp.) than those of noninoculated Pueraria. The inoculation enhanced nodule dry weight 2.44-fold. Consequently, the harvested N significantly (P < 0.05) increased by 83% in inoculated Pueraria, resulting from the increase in N2-fixation and soil N uptake. A loss of 55 to 60% of the N fertilizer was reported, and 36 to 40% of it was immobilized in soil. Here, we demonstrated that both N2-fixing potential of P. phaseoloides and soil N uptake are improved through field inoculations using efficient bradyrhizobial species. In practice, the inoculation contributes to maximize N input in soils by the cover crop's biomass and represent a good strategy to improve soil fertility for subsequent cultivation. PMID:26904363

  8. Symbiotic N 2 -Fixation Estimated by the (15) N Tracer Technique and Growth of Pueraria phaseoloides (Roxb.) Benth. Inoculated with Bradyrhizobium Strain in Field Conditions.

    PubMed

    Sarr, Papa Saliou; Okon, Judith Wase; Begoude, Didier Aime Boyogueno; Araki, Shigeru; Ambang, Zachée; Shibata, Makoto; Funakawa, Shinya

    2016-01-01

    This field experiment was established in Eastern Cameroon to examine the effect of selected rhizobial inoculation on N2-fixation and growth of Pueraria phaseoloides. Treatments consisted of noninoculated and Bradyrhizobium yuanmingense S3-4-inoculated Pueraria with three replications each. Ipomoea batatas as a non-N2-fixing reference was interspersed in each Pueraria plot. All the twelve plots received 2 gN/m(2) of (15)N ammonium sulfate 10% atom excess. At harvest, dry matter yields and the nitrogen derived from atmospheric N2-fixation (%Ndfa) of inoculated Pueraria were significantly (P < 0.05) higher (81% and 10.83%, resp.) than those of noninoculated Pueraria. The inoculation enhanced nodule dry weight 2.44-fold. Consequently, the harvested N significantly (P < 0.05) increased by 83% in inoculated Pueraria, resulting from the increase in N2-fixation and soil N uptake. A loss of 55 to 60% of the N fertilizer was reported, and 36 to 40% of it was immobilized in soil. Here, we demonstrated that both N2-fixing potential of P. phaseoloides and soil N uptake are improved through field inoculations using efficient bradyrhizobial species. In practice, the inoculation contributes to maximize N input in soils by the cover crop's biomass and represent a good strategy to improve soil fertility for subsequent cultivation. PMID:26904363

  9. Compound specific amino acid δ15N in marine sediments: A new approach for studies of the marine nitrogen cycle

    NASA Astrophysics Data System (ADS)

    Batista, Fabian C.; Ravelo, A. Christina; Crusius, John; Casso, Michael A.; McCarthy, Matthew D.

    2014-10-01

    The nitrogen (N) isotopic composition (δ15N) of bulk sedimentary N (δ15Nbulk) is a common tool for studying past biogeochemical cycling in the paleoceanographic record. Empirical evidence suggests that natural fluctuations in the δ15N of surface nutrient N are reflected in the δ15N of exported planktonic biomass and in sedimentary δ15Nbulk. However, δ15Nbulk is an analysis of total combustible sedimentary N, and therefore also includes mixtures of N sources and/or selective removal or preservation of N-containing compounds. Compound-specific nitrogen isotope analyses of individual amino acids (δ15NAA) are novel measurements with the potential to decouple δ15N changes in nutrient N from trophic effects, two main processes that can influence δ15Nbulk records. As a proof of concept study to examine how δ15NAA can be applied in marine sedimentary systems, we compare the δ15NAA signatures of surface and sinking POM sources with shallow surface sediments from the Santa Barbara Basin, a sub-oxic depositional environmental that exhibits excellent preservation of sedimentary organic matter. Our results demonstrate that δ15NAA signatures of both planktonic biomass and sinking POM are well preserved in such surface sediments. However, we also observed an unexpected inverse correlation between δ15N value of phenylalanine (δ15NPhe; the best AA proxy for N isotopic value at the base of the food web) and calculated trophic position. We used a simple N isotope mass balance model to confirm that over long time scales, δ15NPhe values should in fact be directly dependent on shifts in ecosystem trophic position. While this result may appear incongruent with current applications of δ15NAA in food webs, it is consistent with expectations that paleoarchives will integrate N dynamics over much longer timescales. We therefore propose that for paleoceanographic applications, key δ15NAA parameters are ecosystem trophic position, which determines relative partitioning of 15N

  10. Production of 15N-Labelled Liquid Organic Fertilisers Based on Manure and Crop Residue for Use in Fertigation Studies.

    PubMed

    Martínez-Alcántara, Belén; Martínez-Cuenca, Mary-Rus; Fernández, Carlos; Legaz, Francisco; Quiñones, Ana

    2016-01-01

    Large quantities of crop residue and animal manure from agricultural and livestock activities are annually produced worldwide. With proper management, these residues are potentially valuable sources of plant nutrients, mainly N. Recycling such subproducts in sustainably-based agricultural systems can minimise the use of mineral fertilisers, and hence reduce the potential risk of surface and groundwater pollution. Therefore, the purpose of this study was to obtain (small scale) two liquid labelled-organic fertilisers, an animal- and a vegetal-based organic (AO and VO, respectively) fertiliser, to be used as organic N sources in subsequent fertigation studies. Forage maize (Zea mays L.) grown under 15N-labelled fertiliser supply was used as raw material for VO fertiliser production, and also as 15N-labelled sheep feed to obtain 15N-labelled manure. The labelled faeces fraction was used as raw material for the AO fertiliser. The VO fertiliser was obtained after an acidic and an enzyme-driven hydrolysis. The AO fertiliser was obtained after acidic hydrolysis. The VO liquid fertiliser presented an N concentration of 330 mg·L-1, 85% of total N was organic, while ammonium and nitrate N accounted for 55% and 45% of the mineral nitrogen fraction, respectively. This fertiliser also exhibited high K, Ca and S concentrations and notable values for the remaining macro- and micronutrients. The AO liquid fertiliser had a similar total N concentration (496 mg·L-1, 82% of total N in an organic form) to that of VO, but its mineral N fraction significantly differed, which came in a predominantly (95%) ammonia form. It also had a high content of N, P, K and other macronutrients, and sufficient Fe, Zn, Mn, Cu and B levels, which suggests its suitability as a potential fertiliser. The percentage of 15N enrichment in both VO and AO liquid fertilisers exceeded 2% 15N atom excess, which enabled their use in subsequent assays run to assess nitrogen uptake efficiency.

  11. Backbone dynamics of free barnase and its complex with barstar determined by 15N NMR relaxation study.

    PubMed

    Sahu, S C; Bhuyan, A K; Udgaonkar, J B; Hosur, R V

    2000-10-01

    Backbone dynamics of uniformly 15N-labeled free barnase and its complex with unlabelled barstar have been studied at 40 degrees C, pH 6.6, using 15N relaxation data obtained from proton-detected 2D [1H]-15N NMR spectroscopy. 15N spin-lattice relaxation rate constants (R1), spin-spin relaxation rate constants (R2), and steady-state heteronuclear [1H]-15N NOEs have been measured at a magnetic field strength of 14.1 Tesla for 91 residues of free barnase and for 90 residues out of a total of 106 in the complex (excluding three prolines and the N-terminal residue) backbone amide 15N sites of barnase. The primary relaxation data for both the cases have been analyzed in the framework of the model-free formalism using both isotropic and axially symmetric models of the rotational diffusion tensor. As per the latter, the overall rotational correlation times (tau(m)) are 5.0 and 9.5 ns for the free and complexed barnase, respectively. The average order parameter is found to be 0.80 for free barnase and 0.86 for the complex. However, the changes are not uniform along the backbone and for about 5 residues near the binding interface there is actually a significant decrease in the order parameters on complex formation. These residues are not involved in the actual binding. For the residues where the order parameter increases, the magnitudes vary significantly. It is observed that the complex has much less internal mobility, compared to free barnase. From the changes in the order parameters, the entropic contribution of NH bond vector motion to the free energy of complex formation has been calculated. It is apparent that these motion's cause significant unfavorable contributions and therefore must be compensated by many other favorable contributions to effect tight complex formation. The observed variations in the motion and their different locations with regard to the binding interface may have important implications for remote effects and regulation of the enzyme action. PMID

  12. Nuclear magnetic resonance study of the Schiff base in bacteriorhodopsin: Counterion effects on the sup 15 N shift anisotropy

    SciTech Connect

    de Groot, H.J.M.; Harbison, G.S.; Herzfeld, J.; Griffin, R.G. )

    1989-04-18

    High-resolution, solid-state {sup 15}N NMR has been used to study the chemical shift anisotropies of the Schiff bases in bacteriorhodopsin (bR) and in an extensive series of model compounds. Using slow-spinning techniques, the authors are able to obtain sufficient rotational sideband intensity to determine the full {sup 15}N chemical shift anisotropy for the Schiff base nitrogen in bR{sub 548} and bR{sub 568}. Comparisons are made between all-trans-bR{sub 568} and N-all-trans-retinylidene butylimine salts with halide, phenolate, and carboxylate counterions. It is argues that for the model compounds the variation in {sup 15}N chemical shift reflects the variation in (hydrogen) bond strength with the various counterions. The results suggest that carboxylates and tyrosinates may form hydrogen bonds of comparable strength in a hydrophobic environment. Thus, the hydrogen bonding strength of a counterion depends on factors that are not completely reflected in the solution pK{sub a} of its conujugate acid. For the model compounds, the two most downfield principal values of the {sup 15}N chemical shift tensor, {sigma}{sub 22} and {sigma}{sub 33}, vary dramatically with different counterions, whereas {sigma}{sub 11} remains essentially unaffected. In addition, there exists a linear correlation between {sigma}{sub 22} and {sigma}{sub 33}, which suggests that a single mechanism is responsible for the variation in chemical shifts present in all three classes of model compounds. The data for bR{sub 568} follow this trend, but the isotropic shift is 11 ppm further upfield than any of the model compounds. This extreme value suggests an unusually weak hydrogen bond in the protein.

  13. In Vivo Fluxes in the Ammonium-Assimilatory Pathways in Corynebacterium glutamicum Studied by 15N Nuclear Magnetic Resonance

    PubMed Central

    Tesch, M.; de Graaf, A. A.; Sahm, H.

    1999-01-01

    Glutamate dehydrogenase (GDH) and glutamine synthetase (GS)–glutamine 2-oxoglutarate-aminotransferase (GOGAT) represent the two main pathways of ammonium assimilation in Corynebacterium glutamicum. In this study, the ammonium assimilating fluxes in vivo in the wild-type ATCC 13032 strain and its GDH mutant were quantitated in continuous cultures. To do this, the incorporation of 15N label from [15N]ammonium in glutamate and glutamine was monitored with a time resolution of about 10 min with in vivo 15N nuclear magnetic resonance (NMR) used in combination with a recently developed high-cell-density membrane-cyclone NMR bioreactor system. The data were used to tune a standard differential equation model of ammonium assimilation that comprised ammonia transmembrane diffusion, GDH, GS, GOGAT, and glutamine amidotransferases, as well as the anabolic incorporation of glutamate and glutamine into biomass. The results provided a detailed picture of the fluxes involved in ammonium assimilation in the two different C. glutamicum strains in vivo. In both strains, transmembrane equilibration of 100 mM [15N]ammonium took less than 2 min. In the wild type, an unexpectedly high fraction of 28% of the NH4+ was assimilated via the GS reaction in glutamine, while 72% were assimilated by the reversible GDH reaction via glutamate. GOGAT was inactive. The analysis identified glutamine as an important nitrogen donor in amidotransferase reactions. The experimentally determined amount of 28% of nitrogen assimilated via glutamine is close to a theoretical 21% calculated from the high peptidoglycan content of C. glutamicum. In the GDH mutant, glutamate was exclusively synthesized over the GS/GOGAT pathway. Its level was threefold reduced compared to the wild type. PMID:10049869

  14. Production of 15N-Labelled Liquid Organic Fertilisers Based on Manure and Crop Residue for Use in Fertigation Studies.

    PubMed

    Martínez-Alcántara, Belén; Martínez-Cuenca, Mary-Rus; Fernández, Carlos; Legaz, Francisco; Quiñones, Ana

    2016-01-01

    Large quantities of crop residue and animal manure from agricultural and livestock activities are annually produced worldwide. With proper management, these residues are potentially valuable sources of plant nutrients, mainly N. Recycling such subproducts in sustainably-based agricultural systems can minimise the use of mineral fertilisers, and hence reduce the potential risk of surface and groundwater pollution. Therefore, the purpose of this study was to obtain (small scale) two liquid labelled-organic fertilisers, an animal- and a vegetal-based organic (AO and VO, respectively) fertiliser, to be used as organic N sources in subsequent fertigation studies. Forage maize (Zea mays L.) grown under 15N-labelled fertiliser supply was used as raw material for VO fertiliser production, and also as 15N-labelled sheep feed to obtain 15N-labelled manure. The labelled faeces fraction was used as raw material for the AO fertiliser. The VO fertiliser was obtained after an acidic and an enzyme-driven hydrolysis. The AO fertiliser was obtained after acidic hydrolysis. The VO liquid fertiliser presented an N concentration of 330 mg·L-1, 85% of total N was organic, while ammonium and nitrate N accounted for 55% and 45% of the mineral nitrogen fraction, respectively. This fertiliser also exhibited high K, Ca and S concentrations and notable values for the remaining macro- and micronutrients. The AO liquid fertiliser had a similar total N concentration (496 mg·L-1, 82% of total N in an organic form) to that of VO, but its mineral N fraction significantly differed, which came in a predominantly (95%) ammonia form. It also had a high content of N, P, K and other macronutrients, and sufficient Fe, Zn, Mn, Cu and B levels, which suggests its suitability as a potential fertiliser. The percentage of 15N enrichment in both VO and AO liquid fertilisers exceeded 2% 15N atom excess, which enabled their use in subsequent assays run to assess nitrogen uptake efficiency. PMID:26982183

  15. Production of 15N-Labelled Liquid Organic Fertilisers Based on Manure and Crop Residue for Use in Fertigation Studies

    PubMed Central

    Martínez-Alcántara, Belén; Martínez-Cuenca, Mary-Rus; Fernández, Carlos; Legaz, Francisco; Quiñones, Ana

    2016-01-01

    Large quantities of crop residue and animal manure from agricultural and livestock activities are annually produced worldwide. With proper management, these residues are potentially valuable sources of plant nutrients, mainly N. Recycling such subproducts in sustainably-based agricultural systems can minimise the use of mineral fertilisers, and hence reduce the potential risk of surface and groundwater pollution. Therefore, the purpose of this study was to obtain (small scale) two liquid labelled-organic fertilisers, an animal- and a vegetal-based organic (AO and VO, respectively) fertiliser, to be used as organic N sources in subsequent fertigation studies. Forage maize (Zea mays L.) grown under 15N-labelled fertiliser supply was used as raw material for VO fertiliser production, and also as 15N-labelled sheep feed to obtain 15N-labelled manure. The labelled faeces fraction was used as raw material for the AO fertiliser. The VO fertiliser was obtained after an acidic and an enzyme-driven hydrolysis. The AO fertiliser was obtained after acidic hydrolysis. The VO liquid fertiliser presented an N concentration of 330 mg·L-1, 85% of total N was organic, while ammonium and nitrate N accounted for 55% and 45% of the mineral nitrogen fraction, respectively. This fertiliser also exhibited high K, Ca and S concentrations and notable values for the remaining macro- and micronutrients. The AO liquid fertiliser had a similar total N concentration (496 mg·L-1, 82% of total N in an organic form) to that of VO, but its mineral N fraction significantly differed, which came in a predominantly (95%) ammonia form. It also had a high content of N, P, K and other macronutrients, and sufficient Fe, Zn, Mn, Cu and B levels, which suggests its suitability as a potential fertiliser. The percentage of 15N enrichment in both VO and AO liquid fertilisers exceeded 2% 15N atom excess, which enabled their use in subsequent assays run to assess nitrogen uptake efficiency. PMID:26982183

  16. 15N NMR study of nitrate ion structure and dynamics in hydrotalcite-like compounds

    USGS Publications Warehouse

    Hou, X.; James, Kirkpatrick R.; Yu, P.; Moore, D.; Kim, Y.

    2000-01-01

    We report here the first nuclear magnetic resonance (NMR) spectroscopic study of the dynamical and structural behavior of nitrate on the surface and in the interlayer of hydrotalcite-like compounds (15NO3--HT). Spectroscopically resolvable surface-absorbed and interlayer NO3- have dramatically different dynamical characteristics. The interlayer nitrate shows a well defined, temperature independent uniaxial chemical shift anisotropy (CS A) powder pattern. It is rigidly held or perhaps undergoes rotation about its threefold axis at all temperatures between -100 ??C and +80 ??C and relative humidities (R.H.) from 0 to 100% at room temperature. For surface nitrate, however, the dynamical behavior depends substantially on temperature and relative humidity. Analysis of the temperature and R.H. dependences of the peak width yields reorieritational frequencies which increase from essentially 0 at -100 ??C to 2.6 ?? 105 Hz at 60 ??C and an activation energy of 12.6 kJ/mol. For example, for samples at R.H. = 33%, the surface nitrate is isotropically mobile at frequencies greater than 105 Hz at room temperature, but it becomes rigid or only rotates on its threefold axis at -100 ??C. For dry samples and samples heated at 200 ??C (R.H. near 0%), the surface nitrate is not isotropically averaged at room temperature. In contrast to our previous results for 35Cl--containing hydrotalcite (35Cl--HT), no NMR detectable structural phase transition is observed for 15NO3--HT. The mobility of interlayer nitrate in HT is intermediate between that of carbonate and chloride.

  17. Fungal Functioning In A Pine Forest: Evidence From A 15N-Labeled Global Change Experiment

    NASA Astrophysics Data System (ADS)

    Hobbie, E. A.; Hofmockel, K.; van Diepen, L.

    2012-12-01

    In this study, we used tracer 15N labeling and a concurrent six-year nitrogen fertilization experiment in a Pinus taeda Free Air CO2 Enrichment (FACE) experiment to investigate the functioning of saprotrophic and ectomycorrhizal fungi in nitrogen cycling. Ectomycorrhizal fungi with hydrophobic ectomycorrhizae acquired nitrogen from deeper in the soil profile than taxa with hydrophilic ectomycorrhizae, whereas saprotrophic fungi acquired nitrogen primarily from relatively recent surface litter. By combining natural abundance and tracer measurements, we estimated the 15N enrichment of fungi relative to source nitrogen at between 4‰ and 9‰, depending on genus, with some genera sampling pools more 15N-enriched in the labeling experiment than could be measured by bulk analyses. Thus, biologically relevant nitrogen fractions may correspond poorly to what can be extracted chemically. The multiple 15N labels in this FACE experiment proved useful for tracking nitrogen into different fungal taxa from potential nitrogen sources.

  18. Gastric activity studies using a magnetic tracer.

    PubMed

    Cordova-Fraga, T; Bernal-Alvarado, J J; Gutierrez-Juarez, G; Sosa, M; Vargas-Luna, M

    2004-10-01

    A magnetic pulse generator has been set up in order to study gastric activity. Two coils 1.05 m in diameter, arranged in a Helmholtz configuration, were used. The system generated magnetic field pulses higher than 15 mT, of duration 17.3+/-1.2 ms. Measurements were performed in 11 male volunteers, with average age 29.3+/-6.4 years and body mass index 26.0+/-4.8 kg m(-2). Magnetite (Fe3O4) particles with diameters from 75 to 125 microm were used as magnetic tracers, which were mixed in 250 ml of yogurt in concentrations from 2 to 5 g. Signals were registered by using a high speed 3 axis fluxgate digital magnetometer and processed to determine the relaxation of the magnetic tracers by fitting a first-order exponential function to the data, a mean relaxation constant K = 116+/-40 s(-1) was obtained. Also, an average gastric peristaltic frequency was measured; a value of 3.2+/-0.3 cpm was determined. PMID:15535190

  19. Atmospheric tracer experiments for regional dispersion studies

    SciTech Connect

    Heffter, J.L.; Ferber, G.J.

    1980-01-01

    Tracer experiments are being conducted to verify atmospheric transport and dispersion calculations at distances from tens to hundreds of km from pollutant sources. In one study, a 2 1/2 year sampling program has been carried out at 13 sites located 30 to 140 km from a source of /sup 85/Kr at the Savannah River Plant in South Carolina. Average weekly concentrations as well as twice-daily concentrations were obtained. Sampling data and meteorological data, including surface, tower, and rawinsonde observations are available on magnetic tape for model verification studies. Some verification results for the Air Resources Laboratories Atmospheric Transort and Dispersion Model (ARL-ATAD) are shown for averaging periods from one week to two years.

  20. Expression, purification, and mass spectrometric analysis of 15N, 13C-labeled RGD-hirudin, expressed in Pichia pastoris, for NMR studies.

    PubMed

    Huang, Yinong; Zhang, Yanling; Wu, Yi; Wang, Jue; Liu, Xingang; Dai, Linsen; Wang, Longsheng; Yu, Min; Mo, Wei

    2012-01-01

    A novel recombinant hirudin, RGD-hirudin, inhibits the activity of thrombin and the aggregation of platelets. Here, we successfully expressed (15)N, (13)C-labeled RGD-hirudin in Pichia pastoris in a fermenter. The protein was subsequently purified to yield sufficient quantities for structural and functional studies. The purified protein was characterized by HPLC and MALDI-TOF mass spectroscopy. Analysis revealed that the protein was pure and uniformly labeled with (15)N and (13)C. A bioassay showed that the anti-thrombin activity and the anti-platelet aggregation ability of the labeled protein were the same as those of unlabeled RGD-hirudin. Multidimensional heteronuclear NMR spectroscopy has been used to determine almost complete backbone (15)N, (13)C and (1)H resonance assignments of the r-RGD-Hirudin. The (15)N-(1)H HSQC spectrum of uniformly (15)N, (13)C-labeled RGD-hirudin allowed successful assignment of the signals. Examples of the quality of the data are provided for the (15)N-(l)H correlation spectrum, and by selected planes of the CBCA(CO)NH, CBCANH, and HNCO experiments. These results provide a basis for further studies on the structure-function relationship of RGD-hirudin with thrombin and platelets. PMID:22879918

  1. 10 CFR 39.45 - Subsurface tracer studies.

    Code of Federal Regulations, 2011 CFR

    2011-01-01

    ... 10 Energy 1 2011-01-01 2011-01-01 false Subsurface tracer studies. 39.45 Section 39.45 Energy NUCLEAR REGULATORY COMMISSION LICENSES AND RADIATION SAFETY REQUIREMENTS FOR WELL LOGGING Equipment § 39.45 Subsurface tracer studies. (a) The licensee shall require all personnel handling...

  2. 10 CFR 39.45 - Subsurface tracer studies.

    Code of Federal Regulations, 2010 CFR

    2010-01-01

    ... 10 Energy 1 2010-01-01 2010-01-01 false Subsurface tracer studies. 39.45 Section 39.45 Energy NUCLEAR REGULATORY COMMISSION LICENSES AND RADIATION SAFETY REQUIREMENTS FOR WELL LOGGING Equipment § 39.45 Subsurface tracer studies. (a) The licensee shall require all personnel handling...

  3. 10 CFR 39.45 - Subsurface tracer studies.

    Code of Federal Regulations, 2013 CFR

    2013-01-01

    ... 10 Energy 1 2013-01-01 2013-01-01 false Subsurface tracer studies. 39.45 Section 39.45 Energy NUCLEAR REGULATORY COMMISSION LICENSES AND RADIATION SAFETY REQUIREMENTS FOR WELL LOGGING Equipment § 39.45 Subsurface tracer studies. (a) The licensee shall require all personnel handling...

  4. 10 CFR 39.45 - Subsurface tracer studies.

    Code of Federal Regulations, 2012 CFR

    2012-01-01

    ... 10 Energy 1 2012-01-01 2012-01-01 false Subsurface tracer studies. 39.45 Section 39.45 Energy NUCLEAR REGULATORY COMMISSION LICENSES AND RADIATION SAFETY REQUIREMENTS FOR WELL LOGGING Equipment § 39.45 Subsurface tracer studies. (a) The licensee shall require all personnel handling...

  5. 10 CFR 39.45 - Subsurface tracer studies.

    Code of Federal Regulations, 2014 CFR

    2014-01-01

    ... 10 Energy 1 2014-01-01 2014-01-01 false Subsurface tracer studies. 39.45 Section 39.45 Energy NUCLEAR REGULATORY COMMISSION LICENSES AND RADIATION SAFETY REQUIREMENTS FOR WELL LOGGING Equipment § 39.45 Subsurface tracer studies. (a) The licensee shall require all personnel handling...

  6. δ 15N Studies of Nitrogen Use by the Red Mangrove, Rhizophora mangle L. in South Florida

    NASA Astrophysics Data System (ADS)

    Fry, B.; Bern, A. L.; Ross, M. S.; Meeder, J. F.

    2000-02-01

    To help define nitrogen (N) sources and patterns of N processing in mangrove ecosystems, mangrove leaf nitrogen contents and δ 15N values were assayed in three marshes along the south Florida coast. In each marsh, leaf samples were collected from dwarf mangroves at interior locations and taller mangroves at the ocean fringe. Leaf % N and δ 15N values did not differ consistently between dwarf and tall mangroves, even though there were large variations in δ 15N (18‰ range, -5 to +13‰) and % N (1·2% range, 0·9-2·1%). Highest % N and δ 15N values occurred along the western margin of Biscayne Bay where canals draining agricultural lands deliver high-nitrate waters to fringing mangrove marshes. High mangrove δ 15N values may be good biomonitors of anthropogenic N loading to south Florida estuaries. Lower values likely reflect less anthropogenic N entering the mangrove marshes, as well as differences in plant physiology that occur along the fringe-dwarf gradient.

  7. Sinks for nitrogen inputs in terrestrial ecosystems: A meta-analysis of 15N tracer field studies

    EPA Science Inventory

    Anthropogenic nitrogen (N) deposition can have a range of effects on terrestrial ecosystems, but these effects depend in part on the fate of this deposited N, particularly in the amount retained or lost from the system, and in the partitioning of retained N between plants and soi...

  8. National Biomedical Tracer Facility: Project definition study

    SciTech Connect

    Heaton, R.; Peterson, E.; Smith, P.

    1995-05-31

    The Los Alamos National Laboratory is an ideal institution and New Mexico is an ideal location for siting the National Biomedical Tracer Facility (NBTF). The essence of the Los Alamos proposal is the development of two complementary irradiation facilities that combined with our existing radiochemical processing hot cell facilities and waste handling and disposal facilities provide a low cost alternative to other proposals that seek to satisfy the objectives of the NBTF. We propose the construction of a 30 MeV cyclotron facility at the site of the radiochemical facilities, and the construction of a 100 MeV target station at LAMPF to satisfy the requirements and objectives of the NBTF. We do not require any modifications to our existing radiochemical processing hot cell facilities or our waste treatment and disposal facilities to accomplish the objectives of the NBTF. The total capital cost for the facility defined by the project definition study is $15.2 M. This cost estimate includes $9.9 M for the cyclotron and associated facility, $2.0 M for the 100 MeV target station at LAMPF, and $3.3 M for design.

  9. NMR study of Met-1 human Angiogenin: (1)H, (13)C, (15)N backbone and side-chain resonance assignment.

    PubMed

    Tsika, Aikaterini C; Chatzileontiadou, Demetra S M; Leonidas, Demetres D; Spyroulias, Georgios A

    2016-10-01

    Here, we report the high yield expression and preliminary structural analysis via solution hetero-nuclear NMR spectroscopy of the recombinant Met-1 human Angiogenin. The analysis reveals a well folded as well as, a monomeric polypeptide. Τhe sequence-specific assignment of its (1)H, (15)N and (13)C resonances at high percentage was obtained. Also, using TALOS+ its secondary structure elements were determined.

  10. Novel tracer method to measure isotopic labeled gas-phase nitrous acid (HO15NO) in biogeochemical studies.

    PubMed

    Wu, Dianming; Kampf, Christopher J; Pöschl, Ulrich; Oswald, Robert; Cui, Junfang; Ermel, Michael; Hu, Chunsheng; Trebs, Ivonne; Sörgel, Matthias

    2014-07-15

    Gaseous nitrous acid (HONO), the protonated form of nitrite, contributes up to ∼60% to the primary formation of hydroxyl radical (OH), which is a key oxidant in the degradation of most air pollutants. Field measurements and modeling studies indicate a large unknown source of HONO during daytime. Here, we developed a new tracer method based on gas-phase stripping-derivatization coupled to liquid chromatography-mass spectrometry (LC-MS) to measure the 15N relative exceedance, ψ(15N), of HONO in the gas-phase. Gaseous HONO is quantitatively collected and transferred to an azo dye, purified by solid phase extraction (SPE), and analyzed using high performance liquid chromatography coupled to mass spectrometry (HPLC-MS). In the optimal working range of ψ(15N)=0.2-0.5, the relative standard deviation of ψ(15N) is <4%. The optimum pH and solvents for extraction by SPE and potential interferences are discussed. The method was applied to measure HO15NO emissions from soil in a dynamic chamber with and without spiking 15) labeled urea. The identification of HO15NO from soil with 15N urea addition confirmed biogenic emissions of HONO from soil. The method enables a new approach of studying the formation pathways of HONO and its role for atmospheric chemistry (e.g., ozone formation) and environmental tracer studies on the formation and conversion of gaseous HONO or aqueous NO2- as part of the biogeochemical nitrogen cycle, e.g., in the investigation of fertilization effects on soil HONO emissions and microbiological conversion of NO2- in the hydrosphere.

  11. 15N-15N Proton Assisted Recoupling in Magic Angle Spinning NMR

    PubMed Central

    Lewandowski, Józef R.; De Paëpe, Gaël; Eddy, Matthew T.; Griffin, Robert G.

    2009-01-01

    We describe a new magic angle spinning (MAS) NMR experiment for obtaining 15N-15N correlation spectra. The approach yields direct information about the secondary and tertiary structure of proteins, including identification of α-helical stretches and inter-strand connectivity in antiparallel β-sheets, which are of major interest for structural studies of membrane proteins and amyloid fibrils. The method, 15N-15N proton assisted recoupling (PAR), relies on a second order mechanism, third spin assisted recoupling (TSAR), used previously in the context of 15N-13C and 13C-13C polarization transfer schemes. In comparison to 15N-15N proton driven spin diffusion experiments, the PAR technique accelerates polarization transfer between 15N’s by a factor of ~102−103, and is furthermore applicable over the entire range of currently available MAS frequencies (10–70 kHz). PMID:19334788

  12. 15N solid-state nuclear magnetic resonance study of pyrolyzed metal-polyaniline cathode catalysts for oxygen reduction in fuel cells

    NASA Astrophysics Data System (ADS)

    Kuroki, Shigeki; Hosaka, Yo; Yamauchi, Chiharu; Nagata, Shinsuke; Sonoda, Mayu

    2015-09-01

    The oxygen reduction reaction (ORR) activity of pyrolyzed metal-free and metal (Mn, Fe, Co, Ni and Cu)-containing polyaniline (PANI) in polymer electrolyte fuel cell (PEFC) was studied. The metal-free PANI800 shows quite poor ORR catalytic activity, whilst the metal-containing PANIMe800 display a better ORR activity. The 15N CP/MAS NMR spectra of PANINi800 and PANICu800 show one weak peak at 118 ppm and there is no peak observed in PANIFe800, against that of PANI800, PANIMn800, PANICo800 and PANINi800 show two peaks at 273 and 118 ppm assigned to the pyridinic and pyridinium nitrogens. It is because of the paramagnetic effect of metal ions. The 15N spin-echo NMR spectra of PANIMe800 with fast recycle delay show the peaks at 140 and 270 ppm assigned to the graphitic and pyridinic nitrogens, against that of PANI800 shows no peak. The spectra of PANIMn800, PANICo800, PANINi800 and PANICu600 also contain a very broaden peak at 430 ppm assigned to the nitrogen with Fermi-contact effect from metal ions. The spectra of PANIFe800 show some spinning side bands and the average Fe3+-15N distance can be calculated. The some amount of iron ion are relieved and average Fe3+-15N distance increase after acid washing and the ORR activity decreases.

  13. National Biomedical Tracer Facility. Project definition study

    SciTech Connect

    Schafer, R.

    1995-02-14

    We request a $25 million government-guaranteed, interest-free loan to be repaid over a 30-year period for construction and initial operations of a cyclotron-based National Biomedical Tracer Facility (NBTF) in North Central Texas. The NBTF will be co-located with a linear accelerator-based commercial radioisotope production facility, funded by the private sector at approximately $28 million. In addition, research radioisotope production by the NBTF will be coordinated through an association with an existing U.S. nuclear reactor center that will produce research and commercial radioisotopes through neutron reactions. The combined facilities will provide the full range of technology for radioisotope production and research: fast neutrons, thermal neutrons, and particle beams (H{sup -}, H{sup +}, and D{sup +}). The proposed NBTF facility includes an 80 MeV, 1 mA H{sup -} cyclotron that will produce proton-induced (neutron deficient) research isotopes.

  14. Neutrally buoyant tracer in gas cleaning equipment: a case study

    NASA Astrophysics Data System (ADS)

    Peng, Weiming; Hoffmann, Alex C.; Dries, Huub W. A.; Regelink, Michiel; Foo, Kee-Khoon

    2005-12-01

    A generic problem when studying the gas flow in gas cleaning equipment is that any conventional tracer, whether solid particles or liquid droplets, is separated out in accordance with the purpose of the equipment. This makes it impossible, for instance, to visualize the core of the vortex in centrifugal gas cleaning equipment. This paper explores the use of a neutrally buoyant tracer. The tracer is soap bubbles filled with helium. The smaller density of the helium relative to the surrounding air is precisely compensated by the mass of the bubble film to create a neutrally buoyant tracer. The method is used to study the flow in a swirl-tube gas-solid separator, highlighting flow features that cannot be shown with, for instance, LDA. Results are shown as controlled exposure time photographs, where pathlines of the tracer show the flow pattern. The results are further clarified by high-time-resolution pressure measurements at the walls. The work shows that the vortex core can be directly visualized using this technique. The vortex core is observed to, under some conditions, bend to—and spin around—the wall of the separator. Under other conditions, the vortex core coincides with the separator axis, and extends to the bottom of the hopper under the swirl tube. Also the flow in the downstream tubing is studied. The possibilities for obtaining quantitative data for the gas velocity field are discussed, and a promising method for doing this is identified.

  15. A solution NMR study of the selectively 13C, 15N-labeled peptaibol chrysospermin C in methanol.

    PubMed

    Anders, R; Wenschuh, H; Soskic, V; Fischer-Frühholz, S; Ohlenschläger, O; Dornberger, K; Brown, L R

    1998-07-01

    The conformation of the 19-residue peptaibol chrysospermin C in methanol has been investigated by NMR spectroscopy using selective 15N and 13C labeling of the alpha-aminoisobutyric acid (Aib) residues. Complete 1H and 13C sequential assignments, including stereospecific assignments for the heavily overlapped resonances from the two Cbeta methyl groups of the eight Aib residues, are reported for a peptaibol for the first time. An Aib residue followed by a Pro is an exception to previous suggestions regarding stereospecific assignment of the two Cbeta methyl groups of Aib residues. Local nuclear Overhauser effects and 3J(HNC') and 3J(HNCbeta) scalar couplings indicate that the phi angles of the Aib residues are restricted sterically to local conformations consistent with right-handed helices. Despite these constraints on the eight Aib residues, the NMR data for chrysospermin C in methanol are generally most consistent with an ensemble of transient conformations, including backbone conformations inconsistent with helical structures. Initial NMR measurements for chrysospermin C bound to micelles suggest structural and dynamic differences relative to alamethicin bound to micelles which may be related to differences in gating voltages for formation of ion channels.

  16. Ammonium transport and reaction in contaminated groundwater: Application of isotope tracers and isotope fractionation studies

    USGS Publications Warehouse

    Böhlke, J.K.; Smith, R.L.; Miller, D.N.

    2006-01-01

    Ammonium (NH4+) is a major constituent of many contaminated groundwaters, but its movement through aquifers is complex and poorly documented. In this study, processes affecting NH4+ movement in a treated wastewater plume were studied by a combination of techniques including large-scale monitoring of NH4+ distribution; isotopic analyses of coexisting aqueous NH4+, NO3-, N2, and sorbed NH 4+; and in situ natural gradient 15NH 4+ tracer tests with numerical simulations of 15NH4+, 15NO3-, and 15N2 breakthrough data. Combined results indicate that the main mass of NH4+ was moving downgradient at a rate about 0.25 times the groundwater velocity. Retardation factors and groundwater ages indicate that much of the NH4+ in the plume was recharged early in the history of the wastewater disposal. NO3- and excess N2 gas, which were related to each other by denitrification near the plume source, were moving downgradient more rapidly and were largely unrelated to coexisting NH 4+. The ??15N data indicate areas of the plume affected by nitrification (substantial isotope fractionation) and sorption (no isotope fractionation). There was no conclusive evidence for NH 4+-consuming reactions (nitrification or anammox) in the anoxic core of the plume. Nitrification occurred along the upper boundary of the plume but was limited by a low rate of transverse dispersive mixing of wastewater NH4+ and O2 from overlying uncontaminated groundwater. Without induced vertical mixing or displacement of plume water with oxic groundwater from upgradient sources, the main mass of NH4+ could reach a discharge area without substantial reaction long after the more mobile wastewater constituents are gone. Multiple approaches including in situ isotopic tracers and fractionation studies provided critical information about processes affecting NH4+ movement and N speciation.

  17. Tracer Studies In A Laboratory Beach Subjected To Waves

    EPA Science Inventory

    This work investigated the washout of dissolved nutrients from beaches due to waves by conducting tracer studies in a laboratory beach facility. The effects of waves were studied in the case where the beach was subjected to the tide, and that in which no tidal action was present...

  18. A Tracer Study of Lebanese Upper Secondary School Students

    ERIC Educational Resources Information Center

    Vlaardingerbroek, Barend; Dallal, Kamel; Rizkallah, George; Rabah, Jihan

    2007-01-01

    This paper presents data arising from a tracer study of 90 terminating Beirut upper secondary school students. Nearly all the students intended to transit to university, about half of them to science and technology programmes, and subsequently did so. Median anticipated earnings upon graduation were realistic, but a lack of information or guidance…

  19. Studies of thunderstorm transport processes with aircraft using tracer techniques

    SciTech Connect

    Detwiler, A.G.; Smith, P.L.; Stith, J.L.

    1996-10-01

    Instrumented aircraft can provide in situ measurements of winds and turbulence useful for studying transport and dispersion in clouds. Using inert artificial gases as tracers, and fast response analyzers on aircraft, time-resolved observations of transport and dispersion have been obtained. Examples are shown of these types of observations in and around cumulus and cumulonimbus clouds. 23 refs., 6 figs.

  20. You are not always what we think you eat. Selective assimilation across multiple whole-stream isotopic tracer studies

    DOE PAGES

    Dodds, W. K.; Collins, S. M.; Hamilton, S. K.; Tank, J. L.; Johnson, S.; Webster, J. R.; Simon, K. S.; Whiles, M. R.; Rantala, H. M.; McDowell, W. H.; et al

    2014-10-01

    Analyses of 21 15N stable isotope tracer experiments, designed to examine food web dynamics in streams around the world, indicated that the isotopic composition of food resources assimilated by primary consumers (mostly invertebrates) poorly reflected the presumed food sources. Modeling indicated that consumers assimilated only 33–50% of the N available in sampled food sources such as decomposing leaves, epilithon, and fine particulate detritus over feeding periods of weeks or more. Thus, common methods of sampling food sources consumed by animals in streams do not sufficiently reflect the pool of N they assimilate. Lastly, Isotope tracer studies, combined with modeling andmore » food separation techniques, can improve estimation of N pools in food sources that are assimilated by consumers.« less

  1. Differential growth of the fungus Absidia cylindrospora on 13C/15N-labelled media.

    PubMed

    Crotty, F V; Blackshaw, R P; Murray, P J

    2011-06-15

    Many studies utilise enrichment of stable isotopes as tracers to follow the interactions occurring within soil food webs and methods have been developed to enrich bacteria, soil fauna and plant litter, Here for the first time we attempt to enrich a soil fungus to 99 atom% with (13)C and (15)N stable isotopes. In this study our objectives were to (a) assess whether the saprotrophic zygomycete fungus Absidia cylindrospora could grow on a medium enriched to 99 atom% with (13)C-glucose and (15)N-ammonium chloride, (b) to determine the level of enrichment obtained, and (c) to examine the change in growth rate of this fungus while it was growing on the dually enriched medium. To achieve this, the fungus was grown on agar enriched with (13)C and (15)N to 99 atom% and its growth rate monitored. The results showed that A. cylindrospora would grow on the highly labelled growth medium, but that its rate of growth was affected compared with the rate on either natural abundance media or media highly enriched with a single isotope ((13)C or (15)N). The implications of these results is that although the fungus is able to utilise these heavier isotopes, the biochemical processes involved in growth are affected, and consideration should be given to these differences when using stable isotope tracers in, for example, soil food web studies.

  2. Dependence of in vivo glutamine synthetase activity on ammonia concentration in rat brain studied by 1H - 15N heteronuclear multiple-quantum coherence-transfer NMR.

    PubMed Central

    Kanamori, K; Ross, B D; Kuo, E L

    1995-01-01

    The dependence of the in vivo rate of glutamine synthesis on the substrate ammonia concentration was studied in rat brain by 1H-15N heteronuclear multiple-quantum coherence-transfer NMR in combination with biochemical techniques. In vivo rates were measured at various steady-state blood and brain ammonia concentrations within the ranges 0.4-0.55 mumol/g and 0.86-0.98 mumol/g respectively, after low-rate intravenous 15NH4+ infusion (isotope chase). The rate of glutamine synthesis at steady state was determined from the change in brain [5-15N]glutamine levels during isotope chase, observed selectively through the amide proton by NMR, and 15N enrichments of brain glutamine and of blood and brain ammonia measured byN gas chromatography-MS. The in vivo rate (v) was 3.3-4.5 mumol/h per g of brain at blood ammonia concentrations (s) of 0.40-0.55 mumol/g. A linear increase of 1/v with 1/s permitted estimation of the in vivo glutamine synthetase (GS) activity at a physiological blood ammonia concentration to be 0.4-2.1 mumol/h per g. The observed ammonia-dependence strongly suggests that, under physiological conditions, in vivo GS activity is kinetically limited by sub-optimal in situ concentrations of ammonia as well as glutamate and ATP. Comparison of the observed in vivo GS activity with the reported in vivo rates of glutaminase and of gamma-aminobutyrate (GABA) synthesis suggests that, under mildly hyperammonaemic conditions, glutamine is synthesized at a sufficiently high rate to serve as a precursor of GABA, but glutaminase-catalysed hydrolysis of glutamine is too slow to be the sole provider of glutamate used for GABA synthesis. PMID:7487913

  3. Hanford facilities tracer study report (315 Water Treatment Facility)

    SciTech Connect

    Ambalam, T.

    1995-04-14

    This report presents the results and findings of a tracer study to determine contact time for the disinfection process of 315 Water Treatment Facility that supplies sanitary water for the 300 Area. The study utilized fluoride as the tracer and contact times were determined for two flow rates. Interpolation of data and short circuiting effects are also discussed. The 315 Water Treatment Facility supplies sanitary water for the 300 Area to various process and domestic users. The Surface Water Treatment Rule (SWTR), outlined in the 1986 Safe Drinking Water Act Amendments enacted by the EPA in 1989 and regulated by the Washington State Department of Health (DOH) in Section 246-290-600 of the Washington Administrative Code (WAC), stipulates filtration and disinfection requirements for public water systems under the direct influence of surface water. The SWTR disinfection guidelines require that each treatment system achieves predetermined inactivation ratios. The inactivation by disinfection is approximated with a measure called CxT, where C is the disinfectant residual concentration and T is the effective contact time of the water with the disinfectant. The CxT calculations for the Hanford water treatment plants were derived from the total volume of the contact basin(s). In the absence of empirical data to support CxT calculations, the DOH determined that the CxT values used in the monthly reports for the water treatment plants on the Hanford site were invalid and required the performance of a tracer study at each plant. In response to that determination, a tracer study will be performed to determine the actual contact times of the facilities for the CxT calculations.

  4. In vivo, large-scale preparation of uniformly (15)N- and site-specifically (13)C-labeled homogeneous, recombinant RNA for NMR studies.

    PubMed

    Le, My T; Brown, Rachel E; Simon, Anne E; Dayie, T Kwaku

    2015-01-01

    Knowledge of how ribonucleic acid (RNA) structures fold to form intricate, three-dimensional structures has provided fundamental insights into understanding the biological functions of RNA. Nuclear magnetic resonance (NMR) spectroscopy is a particularly useful high-resolution technique to investigate the dynamic structure of RNA. Effective study of RNA by NMR requires enrichment with isotopes of (13)C or (15)N or both. Here, we present a method to produce milligram quantities of uniformly (15)N- and site-specifically (13)C-labeled RNAs using wild-type K12 and mutant tktA Escherichia coli in combination with a tRNA-scaffold approach. The method includes a double selection protocol to obtain an E. coli clone with consistently high expression of the recombinant tRNA-scaffold. We also present protocols for the purification of the tRNA-scaffold from a total cellular RNA extract and the excision of the RNA of interest from the tRNA-scaffold using DNAzymes. Finally, we showcase NMR applications to demonstrate the benefit of using in vivo site-specifically (13)C-labeled RNA. PMID:26577743

  5. Attenuation of Nitrate-15N by Vegetated Buffers in an Irrigated Pasture System

    NASA Astrophysics Data System (ADS)

    Haughn, A. B.; Tate, K.; Kessel, C. V.

    2003-12-01

    Irrigated pastures are found within watersheds providing much of Western North America's surface drinking water supply. Vegetative buffers are often proposed to attenuate nutrient pollutants in runoff, but there is limited information on the mechanistic functioning of buffers adjacent to irrigated pastures. This study is intended to fill this gap in knowledge by examining specific vegetation, soil, and landscape characteristics controlling buffer efficiency and capacity. At the University of California Sierra Foothill Research and Extension Center, established flood-irrigated plots with three different buffer treatments are being used to characterize the attenuation of N, P, and sediment by buffers. Stable 15N isotope tracer was applied to quantify the fate of nitrate moving through the pasture and buffers. In the first 10 days following application of the 15N tracer, 2% of the tracer was lost as runoff, with more than half of the total loss occurring from plots with no buffers. Of the remaining tracer, 47% was taken up by grass in the zone of application, 3% was taken up by vegetation within the buffers (primarily in the first 4m of buffer), 20% was stored in the A horizon of the soil, and 28% was lost via leaching and/or gaseous losses. Results presented will include the effect of buffer length on nutrient attenuation and the relative importance of different N pools for nitrate retention. This research will allow land managers to maximize efficiency of riparian buffers adjacent to irrigated pasture, potentially increasing the adoption of vegetated buffers as a management tool.

  6. Heteronuclear NMR studies of cobalamins. 11. sup 15 N NMR studies of the axial nucleotide and amide side chains of cyanocobalamin and dicyanocobamides

    SciTech Connect

    Brown, K.; Brooks, H.B.; Xiang, Zou ); Victor, M.; Ray, A. ); Timkovich, R. )

    1990-11-28

    Spectroscopic and thermodynamic evidence for the structure of cobalamines and dicyanocobalamin (CN){sub 2}Cbl have been previously reported. The structure indicated the occurrence of the so-called tuck-in species. Further observations and characterization of the tuck-in species of (CN){sub 2}Cbl by {sup 15}N NMR spectroscopy are presented herein. These results represent the first observation of the {sup 15}N NMR spectrum of benzimidazole nucleotide of cobalamins. The first NMR observation of the amide protons of cobalamins and their connectivity to the amide nitrogens are also reported. 50 refs., 2 figs., 2 tabs.

  7. Tracer microrheology study of a hydrophobically modified comblike associative polymer.

    PubMed

    Abdala, Ahmed A; Amin, Samiul; van Zanten, John H; Khan, Saad A

    2015-04-01

    The viscoelastic properties of associative polymers are important not only for their use as rheology modifiers but also to understand their complex structure in aqueous media. In this study, the dynamics of comblike hydrophobically modified alkali swellable associative (HASE) polymers are probed using diffusing wave spectroscopy (DWS) based tracer microrheology. DWS-based tracer microrheology accurately probes the dynamics of HASE polymers, and the extracted microrheological moduli versus frequency profile obtained from this technique closely matches that obtained from rotational rheometry measurements. Quantitatively, however, the moduli extracted from DWS-based tracer microrheology measurements are slightly higher than those obtained using rotational rheometry. The creep compliance, elastic modulus, and relaxation time concentration scaling behavior exhibits a power-law dependence. The length scale associated with the elastic to glassy behavior change is obtained from the time-dependent diffusion coefficient. The Zimm-Rouse type scaling is recovered at high frequencies but shows a concentration effect switching from Zimm to more Rouse-like behavior at higher concentrations.

  8. Biogeochemical Indicators in High- and Low-Arctic Marine and Terrestrial Avian Community Changes: Comparative Isotopic (13C, 15N, and 34S) Studies in Alaska and Greenland

    NASA Astrophysics Data System (ADS)

    Causey, D.; Bargmann, N. A.; Burnham, K. K.; Burnham, J. L.; Padula, V. M.; Johnson, J. A.; Welker, J. M.

    2011-12-01

    Understanding the complex dynamics of environmental change in northern latitudes is of paramount importance today, given documented rapid shifts in sea ice, plant phenology, temperatures, deglaciation, and habitat fidelity. This knowledge is particularly critical for Arctic avian communities, which are integral components by which biological teleconnections are maintained between the mid and northern latitudes. Furthermore, Arctic birds are fundamental to Native subsistence lifestyles and a focus for conservation activities. Avian communities of marine and terrestrial Arctic environments represent a broad spectrum of trophic levels, from herbivores (eg., geese Chen spp.), planktivores (eg., auklets Aethia spp.), and insectivores (eg., passerines: Wheatears Oenanthe spp., Longspurs Calcarius spp.), to predators of marine invertebrates (eg., eiders Somateria spp.), nearshore and offshore fish (eg., cormorants Phalacrocorax spp, puffins Fratercula spp.), even other bird species (eg., gulls Larus spp., falcons Peregrinus spp.). This diversity of trophic interconnections is an integral factor in the dynamics of Arctic ecosystem ecology, and they are key indicators for the strength and trajectories of change. We are especially interested in their feeding ecology, using stable isotope-diet relations to examine historical diets and to predict future feeding ecology by this range of species. Since 2009, we have been studying the foodweb ecology using stable isotopes (δ13C, δ15N, δ34S) of contemporaneous coastal and marine bird communities in High Arctic (Northwest Greenland) and Low Arctic (western Aleutian Islands, AK). We are quantifying the isotopic values of blood, organ tissues, and feathers, and have carried out comparisons between native and lipid-extracted samples. Although geographically distant, these communities comprise similar taxonomic and ecological congeners, including several species common to both (eg., Common Eider, Black-legged Kittiwake, Northern

  9. Identification and characterization of conservative organic tracers for use as hydrologic tracers for the Yucca Mountain Site Characterization Study; Progress report, July 1, 1991--December 31, 1991

    SciTech Connect

    Dombrowski, T.; Stetzenbach, K.

    1991-12-31

    Studies continued on organic tracers for use as hydrologic tracers as part of the Yucca Mountain Site Characterization project. Tracers studied include benzoic acids, cinnamic acids, and salicylic acids. The main focus of the work performed during the time period from 07/01/91 to 12/31/91 has been the continuation of (1) LC-MS optimization for tracer identification, (2) batch sorption and degradation studies, (3) neoprene tubing evaluation studies, and (4) soil column evaluation of tracer compounds. All of these areas of research (except perhaps the neoprene tubing evaluation) are ongoing and will continue throughout the coming year.

  10. Compound-specific nitrogen isotope analysis of D-alanine, L-alanine, and valine: application of diastereomer separation to delta15N and microbial peptidoglycan studies.

    PubMed

    Takano, Yoshinori; Chikaraishi, Yoshito; Ogawa, Nanako O; Kitazato, Hiroshi; Ohkouchi, Naohiko

    2009-01-01

    We have developed an analytical method to determine the compound-specific nitrogen isotope compositions of individual amino acid enantiomers using gas chromatography/combustion/isotope ratio mass spectrometry. A novel derivatization of amino acid diastereomers by optically active (R)-(-)-2-butanol or (S)-(+)-2-butanol offers two advantages for nitrogen isotope analysis. First, chromatographic chiral separation can be achieved without the use of chiral stationary-phase columns. Second, the elution order of these compounds on the chromatogram can be switched by a designated esterification reaction. We applied the method to the compound-specific nitrogen isotope analysis of D- and L-alanine in a peptidoglycan derived from the cell walls of cultured bacteria (Firmicutes and Actinobacteria; Enterococcus faecalis, Staphylococcus aureus, Staphylococcus staphylolyticus, Lactobacillus acidophilus, Bacillus subtilis, Micrococcus luteus, and Streptomyces sp.), natural whole bacterial cells (Bacillus subtilis var. natto), (pseudo)-peptidoglycan from archaea (Methanobacterium sp.), and cell wall from eukaryota (Saccharomyces cerevisiae). We observed statistically significant differences in nitrogen isotopic compositions; e.g., delta15N ( per thousand vs air) in Staphylococcus staphylolyticus for d-alanine (19.2 +/- 0.5 per thousand, n = 4) and L-alanine (21.3 +/- 0.8 per thousand, n = 4) and in Bacillus subtilis for D-alanine (6.2 +/- 0.2 per thousand, n = 3) and L-alanine (8.2 +/- 0.4 per thousand, n = 3). These results suggest that enzymatic reaction pathways, including the alanine racemase reaction, produce a nitrogen isotopic difference in amino acid enantiomers, resulting in 15N-depleted D-alanine. This method is expected to facilitate compound-specific nitrogen isotope studies of amino acid stereoisomers.

  11. Restraints on backbone conformations in solid state NMR studies of uniformly labeled proteins from quantitative amide 15N–15N and carbonyl 13C–13C dipolar recoupling data

    PubMed Central

    Hu, Kan-Nian; Qiang, Wei; Bermejo, Guillermo A.; Schwieters, Charles D.; Tycko, Robert

    2013-01-01

    Recent structural studies of uniformly 15N, 13C-labeled proteins by solid state nuclear magnetic resonance (NMR) rely principally on two sources of structural restraints: (i) restraints on backbone conformation from isotropic 15N and 13C chemical shifts, based on empirical correlations between chemical shifts and backbone torsion angles; (ii) restraints on inter-residue proximities from qualitative measurements of internuclear dipole–dipole couplings, detected as the presence or absence of inter-residue crosspeaks in multidimensional spectra. We show that site-specific dipole–dipole couplings among 15N-labeled backbone amide sites and among 13C-labeled backbone carbonyl sites can be measured quantitatively in uniformly-labeled proteins, using dipolar recoupling techniques that we call 15N-BARE and 13C-BARE (BAckbone REcoupling), and that the resulting data represent a new source of restraints on backbone conformation. 15N-BARE and 13C-BARE data can be incorporated into structural modeling calculations as potential energy surfaces, which are derived from comparisons between experimental 15N and 13C signal decay curves, extracted from crosspeak intensities in series of two-dimensional spectra, with numerical simulations of the 15N-BARE and 13C-BARE measurements. We demonstrate this approach through experiments on microcrystalline, uniformly 15N, 13C-labeled protein GB1. Results for GB1 show that 15N-BARE and 13C-BARE restraints are complementary to restraints from chemical shifts and inter-residue crosspeaks, improving both the precision and the accuracy of calculated structures. PMID:22449573

  12. Mechanism of Solid-State Thermolysis of Ammonia Boraine: 15N NMR Study Using Fast Magic-Angle Spinning and Dynamic Nuclear Polarization

    SciTech Connect

    Kobayashi, Takeshi; Gupta, Shalabh; Caporini, Marc A; Pecharsky, Vitalij K; Pruski, Marek

    2014-08-28

    The solid-state thermolysis of ammonia borane (NH3BH3, AB) was explored using state-of-the-art 15N solid-state NMR spectroscopy, including 2D indirectly detected 1H{15N} heteronuclear correlation and dynamic nuclear polarization (DNP)-enhanced 15N{1H} cross-polarization experiments as well as 11B NMR. The complementary use of 15N and 11B NMR experiments, supported by density functional theory calculations of the chemical shift tensors, provided insights into the dehydrogenation mechanism of AB—insights that have not been available by 11B NMR alone. Specifically, highly branched polyaminoborane derivatives were shown to form from AB via oligomerization in the “head-to-tail” manner, which then transform directly into hexagonal boron nitride analog through the dehydrocyclization reaction, bypassing the formation of polyiminoborane.

  13. 15N Tracing Studies on In Vitro Reactions of Ferredoxin-Dependent Nitrite Reductase and Glutamate Synthase Using Reconstituted Electron Donation Systems.

    PubMed

    Yoneyama, Tadakatsu; Fujimori, Tamaki; Yanagisawa, Shuichi; Hase, Toshiharu; Suzuki, Akira

    2015-06-01

    It is known that plants contain ferredoxin (Fd)-dependent nitrite reductase (NiR) and glutamate synthase (GOGAT). The Fd-NiR reaction produces ammonia from nitrite, and the activity is usually measured by nitrite disappearance. The Fd-GOGAT reaction forms two glutamates of different origin, from glutamine and 2-oxoglutarate, and the activity is measured by the oxidation of reductant (NADPH) or by formation of total glutamate. Here, a quantitative probe of the products and efficiency of the process was conducted using (15)N tracing techniques on these reactions in vitro. We quantified the reduction of (15)N-labeled [Formula: see text] to [Formula: see text] and the formation of [(15)N]glutamate and [(14)N]glutamate from [5-(15)N-amide]glutamine plus 2-oxoglutarate by NiR and GOGAT, respectively, with the reductant-Fd-NADP(+) oxidoreductase (FNR)-Fd system as the sequential electron donors. The supply of dithionite or NADPH to recombinant cyanobacterial NiR led to electron donation system-dependent formation of [(15)N]ammonium from [(15)N]nitrite. Addition of 20 mM NaCl and 20 mM Na-ascorbate accelerated nitrite reduction under high concentrations of NADPH. A sufficient supply of NADPH to recombinant Zea mays Fd-GOGAT generated complete GOGAT activity (transferring the [5-(15)N]amide of glutamine to 2-oxoglutarate to form [(15)N]glutamate), whereas a shortage of NADPH resulted in glutaminase activity only, which removed the amide from glutamine and released ammonia and [(14)N]glutamate. We conclude that although the recombinant Fd-GOGAT enzyme has two forms of glutamate synthesis, the first by glutaminase (ammonia release by glutamine amidotransferase) and the second by glutamate synthase (coupling of the ammonia and exogenously applied 2-oxoglutarate), the first works without NADPH, while the second is strictly dependent on NADPH availability.

  14. Study of stomach motility using the relaxation of magnetic tracers.

    PubMed

    Carneiro, A A; Baffa, O; Oliveira, R B

    1999-07-01

    Magnetic tracers can be observed in the interior of the human body to give information about their quantity, position and state of order. With the aim of detecting and studying the degree of disorder of these tracers after they have been previously magnetized inside the stomach, a system composed of magnetization coils and magnetic detectors was developed. Helmholtz coils of diameter 84 cm were used to magnetize the sample and the remanent magnetization (RM) was detected with two first-order gradiometric fluxgate arrays each with a 15 cm base line, sensitivity of 0.5 nT and common mode rejection (CMR) of at least 10. The system allows simultaneous measurement in the anterior and posterior projections of the stomach. Measurements of the time evolution of the RM were performed in vitro and in normal subjects after the ingestion of a test meal labelled with magnetic particles. The data were fitted with an exponential curve and the relaxation time tau was obtained. Initial studies were performed to ascertain the action of a drug that is known to affect the gastric motility, showing that the decay of the remanent magnetization was indeed due to stomach contractions. PMID:10442706

  15. Recent progress of 10Be tracer studies in Chinese loess

    NASA Astrophysics Data System (ADS)

    Zhou, Weijian; Xie, Xingjun; Beck, Warren; Kong, Xianghui; Xian, Feng; Du, Yajuan; Wu, Zhenkun

    2015-10-01

    Studies of cosmogenic 10Be in Chinese loess began about twenty-five years ago and since then a number of research groups worldwide have contributed to a firm understanding of the production, transport, deposition and storage of 10Be in loess. The essential characteristics that make 10Be a useful isotopic tracer in loess, include: (1) dominant atmospheric production directly linked to the intensity of the Earth's magnetic field; (2) climate-dependent deposition; and (3) subsequent immobility, so that as 10Be accumulates in a loess profile its stratigraphic integrity is preserved. This fact, combined with very high deposition rates in loess on the Chinese Loess Plateau, makes 10Be an especially valuable continental archive of paleoclimate and paleomagnetism, complementing marine and ice-core records. Here we provide in particular the most recent progress of 10Be tracer studies in Chinese loess, including the determination of the correct age of the Brunhes-Matuyama polarity reversal at 780 ± 3 ka B.P., in accord with marine and ice records, and quantitative reconstruction of 130-ka paleoprecipitation using 10Be from Chinese loess profiles.

  16. Cryptic or day-to-day parts of the riverbed N cycle - new challenges for 15N

    NASA Astrophysics Data System (ADS)

    Trimmer, Mark; Ouyang, Liao; Lansdown, Katrina

    2016-04-01

    The discovery of anaerobic ammonium oxidation (anammox) not only changed our understanding of the nitrogen cycle in aquatic ecosystems but it also undermined some of the key 15N techniques used to study it. Reformulations of principle equations and the development of new 15N2 and 15N2O techniques enabled the simultaneous quantification of N2 production by anammox and denitrification in mainly soft, cohesive sediments where redox gradients are clearly defined and solute exchanged governed by diffusion. At the heart of the application of 15N, for the quantification of natural 14N cycling, is the key assumption that the respective pools of 15N and 14N are evenly mixed and that both are cycled without bias towards each other. Recent evidence, however, from a variety of aquatic ecosystems, suggests that this may not be the case. For example, organic N may be oxidised directly to N2 gas without ever mixing with the inorganic pool or inorganic intermediates (e.g. nitrite) are 'shunted' internally and also fail to mix evenly with the applied tracer pool. Our most recent work in permeable, oxic gravel riverbeds presents some particular challenges to the application of 15N. In these systems, a tight coupling between aerobic nitrification and anaerobic N2 production - in the presence of 100

  17. Reintegration of child soldiers in Burundi: a tracer study

    PubMed Central

    2012-01-01

    Background Substantial attention and resources are aimed at the reintegration of child soldiers, yet rigorous evaluations are rare. Methods This tracer study was conducted among former child soldiers (N=452) and never-recruited peers (N=191) who participated in an economic support program in Burundi. Socio-economic outcome indicators were measured retrospectively for the period before receiving support (T1; 2005–06); immediately afterwards (T2; 2006–07); and at present (T3; 2010). Participants also rated present functional impairment and mental health indicators. Results Participants reported improvement on all indicators, especially economic opportunity and social integration. At present no difference existed between both groups on any of the outcome indicators. Socio-economic functioning was negatively related with depression- and, health complaints and positively with intervention satisfaction. Conclusion The present study demonstrates promising reintegration trajectories of former child soldiers after participating in a support program. PMID:23095403

  18. Identification and characterization of conservative organic tracers for use as hydrologic tracers for the Yucca Mountain Site Characterization Study; Progress report, June 1--December 31, 1990

    SciTech Connect

    Stetzenbach, K.J.

    1990-12-31

    Ground water tracers are solutes dissolved in or carried by ground water to delineate flow pathways. Tracers provide information on direction and speed of water movement and that of contaminants that might be conveyed by the water. Tracers can also be used to measure effective porosity, hydraulic conductivity, dispersivity and solute distribution coefficients. For most applications tracers should be conservative, that is, move at the same rate as the water and not sorb to aquifer materials. Tracers must have a number of properties to be functional. Regardless of the desired properties, the chemical and physical behavior of a tracer in ground water and the porous medium under study must be understood. Good estimates of tracer behavior can be obtained from laboratory studies. Studies in this proposal will address tracer properties with analytical method development, static sorption and degradation studies and column transport studies, Mutagenicity tests will be performed on promising candidates. The tracers that will be used for these experiments are fluorinated organic acids and other organic compounds that have the chemical and biological stability necessary to be effective in the Yucca Mountain environment. Special emphasis will be placed on compounds that fluoresce or have very large ultraviolet absorption coefficients for very high analytical sensitivity.

  19. The economical synthesis of [2'-(13)C, 1,3-(15)N2]uridine; preliminary conformational studies by solid state NMR.

    PubMed

    Patching, Simon G; Middleton, David A; Henderson, Peter J F; Herbert, Richard B

    2003-06-21

    The synthesis of [2'-(13)C, 1,3-(15)N2]uridine 11 was achieved as follows. An epimeric mixture of D-[1-(13)C]ribose 3 and D-[1-(13)C]arabinose 4 was obtained in excellent yield by condensation of K13CN with D-erythrose 2 using a modification of the Kiliani-Fischer synthesis. Efficient separation of the two aldose epimers was pivotally achieved by a novel ion-exchange (Sm3+) chromatography method. D-[2-(13)C]Ribose 5 was obtained from D-[1-(13)C]arabinose 4 using a Ni(II) diamine complex (nickel chloride plus TEMED). Combination of these procedures in a general cycling manner can lead to the very efficient preparation of specifically labelled 13C-monosaccharides of particular chirality. 15N-labelling was introduced in the preparation of [2'-(13)C, 1,3-(15)N2]uridine 11 via [15N2]urea. Cross polarisation magic angle spinning (CP-MAS) solid-state NMR experiments using rotational echo double resonance (REDOR) were carried out on crystals of the labelled uridine to show that the inter-atomic distance between C-2' and N-1 is closely similar to that calculated from X-ray crystallographic data. The REDOR method will be used now to determine the conformation of bound substrates in the bacterial nucleoside transporters NupC and NupG.

  20. Pathways of nitrogen assimilation in cowpea nodules studied using /sup 15/N/sub 2/ and allopurinol. [Vigna unguiculata L. Walp. cv Vita

    SciTech Connect

    Atkins, C.A.; Storer, P.J.; Pate, J.S.

    1988-01-01

    In the presence of 0.5 millimolar allopurinol (4-hydroxypyrazolo (3,4-d)pyrimidine), an inhibitor of NAD:xanthine oxidoreductase (EC 1.2.3.2), intact attached nodules of cowpea (vigna unguiculata L. Walp. cv Vita 3) formed (/sup 15/N)xanthine from /sup 15/N/sub 2/ at rates equivalent to those of ureide synthesis, confirming the direct assimilation of fixed nitrogen into purines. Xanthine accumulated in nodules and was exported in increasing amounts in xylem of allopurinol-treated plants. Other intermediates of purine oxidation, de novo purine synthesis, and ammonia assimilation did not increase and, over the time course of experiments (4 hours), allopurinol had no effect on nitrogenase (EC 1.87.99.2) activity. Negligible /sup 15/N -labeling of asparagine from /sup 15/N/sub 2/ was observed, suggesting that the significant pool (up to 14 micromoles per gram of nodule fresh weight) of this amide in cowpea nodules was not formed directly from fixation but may have accumulated as a consequence of phloem delivery.

  1. Aligning Higher Education to Workforce Needs in Liberia: A Tracer Study of University Graduates in Liberia

    ERIC Educational Resources Information Center

    Flomo, John S., Jr.

    2013-01-01

    This study investigated the congruence between higher education and the labor market from the perspectives of college graduates in Liberia. It specifically examined the alignment of the skills college students acquire in college to Liberia's labor market. The study employed a Tracer Study quantitative research methodology. Tracer study as a…

  2. Study of the Q branch structure of the 14N and 15N isotopologues of the ν4 band of ammonia using frequency chirped quantum cascade lasers.

    PubMed

    Duxbury, Geoffrey; Wilson, David; Hay, Kenneth; Langford, Nigel

    2013-10-01

    Intrapulse quantum cascade (QC) laser spectrometers are able to produce both saturation and molecular alignment of a gas sample owing to the rapid sweep of the radiation through the absorption features. In the QC lasers used to study the (14)N and (15)N isotopologues of the ν4 band of ammonia centered near 1625 cm(-1), the variation of the chirp rate during the scan is very large, from ca. 85 to ca. 15 MHz ns(-1). In the rapid chirp zone the collisional interaction time of the laser radiation with the gas molecules is short, and large rapid passage effects are seen, whereas at the slow chirp end the line shape resembles that of a Doppler broadened line. The total scan range of the QC laser of ca. 10 cm(-1) is sufficient to allow the spectra of both isotopologues to be recorded and the rapid and slow interactions with the laser radiation to be seen. The rapid passage effects are enhanced by the use of an off axis Herriott cell with an effective path length of 62 m, which allows a buildup of polarization to occur. The effective resolution of the chirped QC laser is ca. 0.012 cm(-1) full width at half-maximum in the 1625 cm(-1) region. The results of these experiments are compared with those of other studies of the ν4 band of ammonia carried out using Fourier transform and Laser Stark spectroscopy. They also demonstrate the versatility of the down chirped QC laser for investigating collisional effects in low pressure gases using long absorbing path lengths.

  3. The magnitude of spatial and temporal variation in δ15N and δ13C differs between taxonomic groups: Implications for food web studies

    NASA Astrophysics Data System (ADS)

    Hyndes, Glenn A.; Hanson, Christine E.; Vanderklift, Mathew A.

    2013-03-01

    Understanding variability in stable isotope abundance is essential for effective hypothesis testing and evaluating food sources, trophic levels and food web structure. The magnitude and sources of variability are likely to differ among taxonomic and functional groups. We aimed to quantify variability of δ13C and δ15N for 16 species representing seven distinct taxonomic groups of benthic invertebrates and autotrophs in a marine ecosystem. We quantified the magnitude of variability among individuals or shoots separated by metres, among eight sites separated by kilometres, and between two survey occasions separated by months. δ13C varied by as much as 7‰ for primary producers, 4‰ for consumers, while δ15N varied by as much as 9‰ and 2‰ respectively. Variation in δ15N of seagrass was largely accounted for by differences among sites, while variation in δ13C was mainly attributable to shoots collected a few metres apart. Compared to seagrasses, variation in macroalgae was mainly explained by differences between the two survey occasions for δ15N and among individuals collected a few metres apart for δ13C. Variation was generally lower for consumers and typically explained by differences among individuals for δ15N but displayed inconsistent patterns for δ13C. Dual isotope Bayesian mixing models showed that the potential contributions of food sources for herbivorous consumers varied among sites and between survey occasions, and also that there was high variability or uncertainty in the contributions of sources within sites. The relative consistency in the main sources of variation among broad taxonomic groups in autotrophs suggests that aspects of physiology that are phylogenetically conserved might be important influences on variation in natural abundances of stable isotopes. In comparison, the sources of variability were less consistent within and among broad consumer groups, suggesting complex interactions between consumers and their food sources.

  4. Importance of sites of tracer administration and sampling in turnover studies

    SciTech Connect

    Katz, J.

    1982-01-01

    Our recent studies with tritium and /sup 14/C-labeled lactate and alanine in starved rats revealed that the sites of tracer administration and sampling have a profound effect on the kinetics of the specific activity curves and the calculation of metabolic parameters. The importance of the sites of tracer administration and sampling for the experimental design and interpretation of tracer data in vivo is discussed.

  5. Chlorophyll a-specific Δ14C, δ13C and δ15N values in stream periphyton: implications for aquatic food web studies

    NASA Astrophysics Data System (ADS)

    Ishikawa, N. F.; Yamane, M.; Suga, H.; Ogawa, N. O.; Yokoyama, Y.; Ohkouchi, N.

    2015-11-01

    Periphytic algae attached to a streambed substrate (periphyton) are an important primary producer in stream ecosystems. We determined the isotopic composition of chlorophyll a in periphyton collected from a stream flowing on limestone bedrock in the Seri River, central Japan. Stable isotope ratios of carbon (δ13C) and nitrogen (δ15N) and natural radiocarbon abundances (Δ14C) were measured in chlorophyll a (δ13Cchl, δ15Nchl and Δ14Cchl) and bulk (δ13Cbulk, δ15Nbulk and Δ14Cbulk) for periphyton, a pure aquatic primary producer (Cladophora sp.) and a terrestrial primary producer (Quercus glauca). Periphyton δ13Cbulk and δ13Cchl values did not necessarily correspond to δ13Cbulk for an algal-grazing specialist (Epeorus latifolium). Periphyton Δ14Cchl values (-258 ‰ in April and -190 ‰ in October) were slightly lower than Δ14Cbulk values (-228 ‰ in April and -179 ‰ in October) but were close to the Δ14C value for dissolved inorganic carbon (DIC; -217 ± 31 ‰), which is a mixture of weathered carbonates (Δ14C = -1000 ‰), CO2 derived from aquatic and terrestrial organic matters (variable Δ14C) and dissolved atmospheric CO2 (Δ14C approximately +30 ‰ in 2013). Δ14Cchl values were also close to Δ14Cbulk for E. latifolium (-215 ‰ in April and -199 ‰ in October) and Cladophora sp. (-210 ‰), whereas the Δ14Cbulk value for Q. glauca (+27 ‰) was closer to Δ14C for atmospheric CO2. Although the bulk isotopic composition of periphyton is recognised as a surrogate for the photosynthetic algal community, natural periphyton is a mixture of aquatic and terrestrial organic materials. Our results indicate that the bulk periphyton matrix at the study site consists of 89 to 95 % algal carbon (derived from 14C-depleted DIC) and 5 to 11 % terrestrial organic carbon (derived from 14C-enriched atmospheric CO2).

  6. Chlorophyll a specific Δ14C, δ13C and δ15N values in stream periphyton: implications for aquatic food web studies

    NASA Astrophysics Data System (ADS)

    Ishikawa, N. F.; Yamane, M.; Suga, H.; Ogawa, N. O.; Yokoyama, Y.; Ohkouchi, N.

    2015-07-01

    We determined the isotopic composition of chlorophyll a in periphytic algae attached to a streambed substrate (periphyton). The samples were collected from a stream flowing on limestone bedrock in the Seri River, central Japan. Stable isotope ratios of carbon (δ13C) and nitrogen (δ15N) and natural radiocarbon abundances (Δ14C) were measured in chlorophyll a (δ13Cchl, δ15Nchl and Δ14Cchl) and bulk (δ13Cbulk, δ15Nbulk and Δ14Cbulk) for periphyton, pure aquatic primary producer (Cladophora sp.) and terrestrial primary producer (Quercus glauca). Periphyton δ13Cbulk and δ13Cchl values did not necessarily correspond to δ13Cbulk for an algal-grazing specialist (Mayfly larva, Epeorus latifolium), suggesting that periphyton δ13C values do not faithfully trace carbon transfer between primary producers and primary consumers. Periphyton Δ14Cchl values (-258 ‰ in April and -190 ‰ in October) were slightly lower than Δ14Cbulk values (-228 ‰ in April and -179 ‰ in October), but were close to the Δ14C value for dissolved inorganic carbon (DIC) (-217 ± 31 ‰), which is a mixture of weathered carbonates (Δ14C = -1000 ‰) and dissolved atmospheric CO2 (Δ14C approximately +30 ‰ in 2013). Δ14Cchl values were also close to Δ14Cbulk for E. latifolium (-215 ‰ in April and -199 ‰ in October) and Cladophora sp. (-210 ‰), whereas the Δ14Cbulk value for Q. glauca (+27 ‰) was closer to Δ14C for atmospheric CO2. Although the bulk isotopic composition of periphyton is recognised as a surrogate for the photosynthetic algal community, natural periphyton is a mixture of aquatic and terrestrial organic materials. Our results indicate that the bulk periphyton matrix at the study site consists of 89 to 95 % algal carbon (derived from 14C-depleted DIC) and 5 to 11 % terrestrial organic carbon (derived from 14C-enriched atmospheric CO2).

  7. Plan for radionuclide tracer studies of the residence time distribution in the Wilsonville dissolver and preheater

    SciTech Connect

    Jolley, R.L.; Begovich, J.M.; Brashear, H.R.; Case, N.; Clark, T.G.; Emery, J.F.; Patton, B.D.; Rodgers, B.R.; Villiers-Fisher, J.F.; Watson, J.S.

    1983-12-01

    Stimulus-response measurements using radiotracers to measure residence time distribution (RTD) and hydrodynamic parameters for the preheaters and dissolvers at the Ft. Lewis Solvent Refined Coal (SRC) and the Exxon Donor Solvent (EDS) coal conversion pilot plants are reviewed. A plan is also presented for a series of radioactive tracer studies proposed for the Advanced Coal Liquefaction Facility at Wilsonville, Alabama, to measure the RTD for the preheater and dissolvers in the SRC-I mode. The tracer for the gas phase will be /sup 133/Xe, and /sup 198/Au (on carbonized resin or as an aqueous colloidal suspension) will be used as the slurry tracer. Four experimental phases are recommended for the RTD tracer studies: (1) preheater; (2) dissolver with 100% takeoff; (3) dissolver with 100% takeoff and solids withdrawal; and (4) dissolver with 50% takeoff. Eighteen gas-tracer and 22 liquid-tracer injections are projected to accomplish the four experimental phases. Two to four tracer injections are projected for preliminary tests to ensure the capability of safe injection of the radiotracers and the collection of statistically significant data. A complete projected cost and time schedule is provided, including procurement of necessary components, preparation of the radiotracers, assembly and testing of tracer injection apparatus and detection systems, onsite work and tracer injections, laboratory experimentation, data analysis, and report writing.

  8. Simultaneous Analyses and Applications of Multiple Fluorobenzoate and Halide Tracers in Hydrologic Studies

    SciTech Connect

    Hu, Q; Moran, J E

    2004-01-22

    An analytical method that employs ion chromatography has been developed to more fully exploit the use of fluorobenzoic acids (FBAs) and halides as hydrologic tracers. In a single run, this reliable, sensitive, and robust method can simultaneously separate and quantify halides (fluoride, chloride, bromide, and iodide) and up to seven FBAs from other common groundwater constituents (e.g., nitrate and sulfate). The usefulness of this ion chromatographic (IC) analytical method is demonstrated in both field and laboratory tracer experiments. Field experiments in unsaturated tuff featuring fractures or a fault show that this efficient and cost-effective method helps achieve the objectives of tracer studies that use multiple FBAs and/or diffusivity tracers (simultaneous use of one or more FBA and halide). The field study examines the hydrologic response of fractures and the matrix to different flow rates and the contribution of matrix diffusion in chemical transport. Laboratory tracer experiments with eight geologic media from across the United States--mostly from Department of Energy facilities where groundwater contamination is prevalent and where subsurface characterization employing tracers has been ongoing or is in need--reveal several insights about tracer transport behavior: (1) Bromide and FBAs are not always transported conservatively. (2) The delayed transport of these anionic tracers is likely related to geologic media characteristics, such as organic matter, pH, iron oxide content, and clay mineralogy. (3) Any use of iodine as a hydrologic tracer should take into account the different sorption behaviors of iodide and iodate and the possible conversion of iodine's initial chemical form. (4) The transport behavior of potential FBA and halide tracers under relevant geochemical conditions should be evaluated before beginning ambitious, large-scale field tracer experiments.

  9. Project definition study for the National Biomedical Tracer Facility

    SciTech Connect

    Roozen, K.

    1995-02-15

    The University of Alabama at Birmingham (UAB) has conducted a study of the proposed National Biomedical Tracer Facility (NBTF). In collaboration with General Atomics, RUST International, Coleman Research Corporation (CRC), IsoMed, Ernst and Young and the advisory committees, they have examined the issues relevant to the NBTF in terms of facility design, operating philosophy, and a business plan. They have utilized resources within UAB, CRC and Chem-Nuclear to develop recommendations on environmental, safety and health issues. The Institute of Medicine Panel`s Report on Isotopes for Medicine and the Life Sciences took the results of prior workshops further in developing recommendations for the mission of the NBTF. The IOM panel recommends that the NBTF accelerator have the capacity to accelerate protons to 80 MeV and a minimum of 750 microamperes of current. The panel declined to recommend a cyclotron or a linac. They emphasized a clear focus on research and development for isotope production including target design, separation chemistry and generator development. The facility needs to emphasize education and training in its mission. The facility must focus on radionuclide production for the research and clinical communities. The formation of a public-private partnership resembling the TRIUMF-Nordion model was encouraged. An advisory panel should assist with the NBTF operations and prioritization.

  10. Structure and reactivity of lithium amides. /sup 6/Li, /sup 13/C, and /sup 15/N NMR spectroscopic studies and colligative measurements of lithium diphenylamide and lithium diphenylamide-lithium bromide complex solvated by tetrahydrofuran

    SciTech Connect

    DePue, J.S.; Collum, D.B.

    1988-08-03

    /sup 6/Li, /sup 13/C, and /sup 15/N NMR spectroscopic studies of lithium diphenylamide in THF/hydrocarbon solutions (THF = tetrahydrofuran) detected two different species. /sup 6/Li and /sup 15/N NMR spectroscopic studies of (/sup 6/Li, /sup 15/N)lithium diphenylamide showed the species observed at low THF concentrations to be a cyclic oligomer. Structural analogies provided strong support for a dimer while colligative measurements at 0/degrees/C indicated the dimer to be di- or trisolvated. On the basis of the observed mass action effects, the species appearing at intermediate THF concentrations is assigned as a contact or solvent-separated ion-paired monomer. Lithium diphenylamide forms a 1:1 adduct with lithium bromide at low THF concentrations. A combination of /sup 6/Li-/sup 15/N double labeling studies and colligative measurements supports a trisolvated cyclic mixed dimer structure. Although detailed spectroscopic studies at elevated THF concentrations were precluded by high fluctionality, the similarity of the /sup 13/C chemical shifts of lithium diphenylamide in the presence and absence of lithium bromide provide indirect evidence that the mixed dimer undergoes a THF concentration dependent dissociation to the monomeric amide and free lithium bromide. 24 references, 9 figures, 2 tables.

  11. Oligomeric complexes of some heteroaromatic ligands and aromatic diamines with rhodium and molybdenum tetracarboxylates: 13C and 15N CPMAS NMR and density functional theory studies.

    PubMed

    Leniak, Arkadiusz; Kamieński, Bohdan; Jaźwiński, Jarosław

    2015-05-01

    Seven new oligomeric complexes of 4,4'-bipyridine; 3,3'-bipyridine; benzene-1,4-diamine; benzene-1,3-diamine; benzene-1,2-diamine; and benzidine with rhodium tetraacetate, as well as 4,4'-bipyridine with molybdenum tetraacetate, have been obtained and investigated by elemental analysis and solid-state nuclear magnetic resonance spectroscopy, (13)C and (15)N CPMAS NMR. The known complexes of pyrazine with rhodium tetrabenzoate, benzoquinone with rhodium tetrapivalate, 4,4'-bipyridine with molybdenum tetrakistrifluoroacetate and the 1 : 1 complex of 2,2'-bipyridine with rhodium tetraacetate exhibiting axial-equatorial ligation mode have been obtained as well for comparison purposes. Elemental analysis revealed 1 : 1 complex stoichiometry of all complexes. The (15)N CPMAS NMR spectra of all new complexes consist of one narrow signal, indicating regular uniform structures. Benzidine forms a heterogeneous material, probably containing linear oligomers and products of further reactions. The complexes were characterized by the parameter complexation shift Δδ (Δδ = δcomplex  - δligand). This parameter ranged from around -40 to -90 ppm in the case of heteroaromatic ligands, from around -12 to -22 ppm for diamines and from -16 to -31 ppm for the complexes of molybdenum tetracarboxylates with 4,4'-bipyridine. The experimental results have been supported by a density functional theory computation of (15)N NMR chemical shifts and complexation shifts at the non-relativistic Becke, three-parameter, Perdew-Wang 91/[6-311++G(2d,p), Stuttgart] and GGA-PBE/QZ4P levels of theory and at the relativistic scalar and spin-orbit zeroth order regular approximation/GGA-PBE/QZ4P level of theory. Nucleus-independent chemical shifts have been calculated for the selected compounds.

  12. Binding of oxytocin and 8-arginine-vasopressin to neurophysin studied by /sup 15/N NMR using magnetization transfer and indirect detection via protons

    SciTech Connect

    Live, D.H.; Cowburn, D.

    1987-10-06

    NMR was used to monitor the binding to neurophysin of oxytocin and 8-arginine-vasopressin, /sup 15/N labeling being used to identify specific backbone /sup 15/N and /sup 1/H signals. The most significant effects of binding were large downfield shifts in the amino nitrogen resonance of Phe-3 of vasopressin and in its associated proton, providing evidence that the peptide bond between residues 2 and 3 of the hormones is hydrogen-bonded to the protein within hormone-neurophysin complexes. Suggestive evidence for hydrogen bonding of the amino nitrogen of Tyr-2 was also obtained in the form of decreased proton exchange rates on binding; however, the chemical shift changes of this nitrogen and its associated proton indicated that such hydrogen bonding, if present, is probably weak. Shifts in the amino nitrogen of Asn-5 and in the -NH protons of both Asn-5 and Cys-6 demonstrated that these residues are significantly perturbed by binding, suggesting conformational changes of the ring on binding and/or the presence of binding sites on the hormone outside the 1-3 region. No support was obtained for the thesis that there is a significant second binding site for vasopressin on each neutrophysin chain. The behavior of both oxytocin and vasopressin on binding was consistent with formation of 1:1 complexes in slow exchange with the free state under most pH conditions. At low pH there was evidence of an increased exchange rate. Additionally, broadening of /sup 15/N resonances in the bound state at low pH occurred without a corresponding change in the resonances of equilibrating free hormone. The results suggest significant conformational alteration in neurophysin-hormone complexes at low pH possibly associated with protonation of the carboxyl group of the hormone-protein salt bridge.

  13. 13N as a tracer for studying glutamate metabolism

    PubMed Central

    Cooper, Arthur J. L.

    2010-01-01

    This mini-review summarizes studies my associates and I carried out that are relevant to the topic of the present volume [i.e. glutamate dehydrogenase (GDH)] using radioactive 13N (t½ 9.96 min) as a biological tracer. These studies revealed the previously unrecognized rapidity with which nitrogen is exchanged among certain metabolites in vivo. For example, our work demonstrated that a) the t½ for conversion of portal vein ammonia to urea in the rat liver is ~10–11 sec, despite the need for five enzyme-catalyzed steps and two mitochondrial transport steps, b) the residence time for ammonia in the blood of anesthetized rats is ≤7–8 sec, c) the t½ for incorporation of blood-borne ammonia into glutamine in the normal rat brain is <3 sec, and d) equilibration between glutamate and aspartate nitrogen in rat liver is extremely rapid (seconds), a reflection of the fact that the components of the hepatic aspartate aminotransferase reaction are in thermodynamic equilibrium. Our work emphasizes the importance of the GDH reaction in rat liver as a conduit for dissimilating or assimilating ammonia as needed. In contrast, our work shows that the GDH reaction in rat brain appears to operate mostly in the direction of ammonia production (dissimilation). The importance of the GDH reaction as an endogenous source of ammonia in the brain and the relation of GDH to the brain glutamine cycle is discussed. Finally, our work integrates with the increasing use of positron emission tomography (PET) and nuclear magnetic resonance (NMR) to study brain ammonia uptake and brain glutamine, respectively, in normal individuals and in patients with liver disease or other diseases associated with hyperammonemia. PMID:21108979

  14. sup 15 N and sup 13 C NMR studies of ligands bound to the 280,000-dalton protein porphobilinogen synthase elucidate the structures of enzyme-bound product and a Schiff base intermediate

    SciTech Connect

    Jaffe, E.K.; Rajagopalan, J.S. ); Markham, G.D. )

    1990-09-11

    Porphobilinogen synthase (PBGS) catalyzes the asymmetric condensation of two molecules of 5-aminolevulinic acid (ALA). Despite the 280,000-dalton size of PBGS, much can be learned about the reaction mechanism through {sup 13}C and {sup 15}N NMR. The authors knowledge, these studies represent the largest protein complex for which individual nuclei have been characterized by {sup 13}C or {sup 15}N NMR. Here they extend their {sup 13}C NMR studies to PBGS complexes with (3,3-{sup 2}H{sub 2},3-{sup 13}C)ALA and report {sup 15}N NMR studies of ({sup 15}N)ALA bound to PBGS. As in their previous {sup 13}C NMR studies, observation of enzyme-bound {sup 15}N-labeled species was facilitated by deuteration at nitrogens that are attached to slowly exchanging hydrogens. For holo-PBGS at neutral pH, the NMR spectra reflect the structure of the enzyme-bound product porphobilinogen (PBG), whose chemical shifts are uniformly consistent with deprotonation of the amino group whose solution pK{sub a} is 11. Despite this local environment, the protons of the amino group are in rapid exchange with solvent. For methyl methanethiosulfonate (MMTS) modified PBGS, the NMR spectra reflect the chemistry of an enzyme-bound Schiff base intermediate that is formed between C{sub 4} of ALA and an active-site lysine. The {sup 13}C chemical shift of (3,3-{sup 2}H{sub 2},3-{sup 13}C)ALA confirms that the Schiff base is an imine of E stereochemistry. By comparison to model imines formed between ({sup 15}N)ALA and hydrazine or hydroxylamine, the {sup 15}N chemical shift of the enzyme-bound Schiff base suggests that the free amino group is an environment resembling partial deprotonation. Deprotonation of the amino group would facilitate formation of a Schiff base between the amino group of the enzyme-bound Schiff base and C{sub 4} of the second ALA substrate. This is the first evidence supporting carbon-nitrogen bond formation as the initial site of interaction between the two substrate molecules.

  15. Analysis techniques for tracer studies of oxidation. M. S. Thesis Final Report

    NASA Technical Reports Server (NTRS)

    Basu, S. N.

    1984-01-01

    Analysis techniques to obtain quantitative diffusion data from tracer concentration profiles were developed. Mass balance ideas were applied to determine the mechanism of oxide growth and to separate the fraction of inward and outward growth of oxide scales. The process of inward oxygen diffusion with exchange was theoretically modelled and the effect of lattice diffusivity, grain boundary diffusivity and grain size on the tracer concentration profile was studied. The development of the tracer concentration profile in a growing oxide scale was simulated. The double oxidation technique was applied to a FeCrAl-Zr alloy using 0-18 as a tracer. SIMS was used to obtain the tracer concentration profile. The formation of lacey oxide on the alloy was discussed. Careful consideration was given to the quality of data required to obtain quantitative information.

  16. TRACER DISPERSION STUDIES FOR HYDRAULIC CHARACTERIZATION OF PIPES

    EPA Science Inventory

    A series of experiments were conducted at the U. S. Environmental Protection Agency (EPA) Test & Evaluation (T&E) Facility in Cincinnati, Ohio, to quantify longitudinal dispersion of a sodium fluoride tracer in polyvinyl chloride (PVC) pipe and ductile iron pipe under laminar, tr...

  17. Study of North Atlantic ventilation using transient tracers. Doctoral Thesis

    SciTech Connect

    Doney, S.C.

    1991-08-01

    Tritium, (3)He, and chlorofluorocarbon distributions in the North Atlantic provide constraints on the ventilation time-scales for the thermocline and abyssal water. A new model function based on a factor analysis of the WMO/IAEA precipitation data set is developed for predicting the spatial and temporal patterns of bomb-tritium in precipitation. Model atmospheric and advective tritium inputs to the North Atlantic are compared with the observed bomb-tritium inventories calculated from the 1972 GEOSECS and 1981-1983 TTO data sets. The observed growth of bomb-tritium levels in the deep North Atlantic are used, along with the tracer gradients ((3)H and (3)He) in the Deep Western Boundary Current, to estimate abyssal ventilation rates and boundary current recirculation. The surface boundary conditions for different transient tracers are found to profoundly effect thermocline ventilation rates estimates. Tracers that equilibrate rapidly with the atmosphere, such as (3)He and the CFCs, have faster apparent ventilation rates and are more appropriate for estimating oxygen utilization rates than tracers that are reset slowly in the surface ocean (e.g. (3)H and (14)C). The chlorofluorocarbon data for a new section in the eastern North Atlantic are presented and used to illustrate the ventilation time-scales for the major water masses in the region. (Copyright (c) Scott C. Doney, 1991.)

  18. Artificial ultra-fine aerosol tracers for highway transect studies

    NASA Astrophysics Data System (ADS)

    Cahill, Thomas A.; Barnes, David E.; Wuest, Leann; Gribble, David; Buscho, David; Miller, Roger S.; De la Croix, Camille

    2016-07-01

    The persistent evidence of health impacts of roadway aerosols requires extensive information for urban planning to avoid putting populations at risk, especially in-fill projects. The required information must cover both highway aerosol sources as well as transport into residential areas under a variety of roadway configurations, traffic conditions, downwind vegetation, and meteorology. Such studies are difficult and expensive to do, but were easier in the past when there was a robust fine aerosol tracer uniquely tied to traffic - lead. In this report we propose and test a modern alternative, highway safety flare aerosols. Roadway safety flares on vehicles in traffic can provide very fine and ultra-fine aerosols of unique composition that can be detected quantitatively far downwind of roadways due to a lack of upwind interferences. The collection method uses inexpensive portable aerosol collection hardware and x-ray analysis protocols. The time required for each transect is typically 1 h. Side by side tests showed precision at ± 4%. We have evaluated this technique both by aerosol removal in vegetation in a wind tunnel and by tracking aerosols downwind of freeways as a function of season, highway configuration and vegetation coverage. The results show that sound walls for at-grade freeways cause freeway pollution to extend much farther downwind than standard models predict. The elevated or fill section freeway on a berm projected essentially undiluted roadway aerosols at distances well beyond 325 m, deep into residential neighborhoods. Canopy vegetation with roughly 70% cover reduced very fine and ultra-fine aerosols by up to a factor of 2 at distances up to 200 m downwind.

  19. Hydrogen doppler spectroscopy using 15N ions

    NASA Astrophysics Data System (ADS)

    Borucki, L.; Becker, H. W.; Gorris, F.; Kubsky, S.; Schulte, W. H.; Rolfs, C.

    The energy spread of atomic and molecular ion beams from the 4 MV Dynamitron tandem accelerator at the Ruhr-Universität Bochum has been studied and in part minimized. Using the ER= 6.40 MeV narrow resonance in 1H(15N,αγ)12C with an 15N energy spread of 4.55 keV, the Doppler broadening for several hydrogen-bearing gases was found to be in good agreement with expectation: e.g. for NH3 gas a rotational-vibrational Doppler width of 10.41 +/- 0.25 keV was observed (theory = 10.4 keV). Studies of the vibrational Doppler widths of H-bonds on a Si <100> surface were performed using a 4πγ-ray detection system together with UHV-chambers for sample preparation, transport, and analysis. The results showed that further improvements in the experimental set-ups are needed for such investigations.

  20. 13N,15N isotope and kinetic evidence against hyponitrite as an intermediate in dentrification.

    PubMed

    Hollocher, T C; Garber, E; Cooper, A J; Reiman, R E

    1980-06-10

    13N- and 15N-labeling experiments were carried out with Paracoccus denitrificans, grown anaerobically on nitrate, to determine whether hyponitrite might be an obligatory intermediate in denitrification and a precursor of nitrous oxide. From experiments designed to trap [13N]- or [15N,15N]hyponitrite by dilution into authentic hyponitrite it was calculated that the intracellular concentration of a presumptive hyponitrite pool must be less than 0.4 mM. In order for a pool of this size to turn over rapidly enough to handle the flux of nitrogen during dentrifucation, the spontaneous rate of hyponitrite dehydration must be enhanced by a factor of several thousand through enzyme catalysis. Cell extracts failed to catalyze this reaction under a variety of conditions. It is concluded that hyponitrite cannot be an intermediate in dentrification. In addition, the assimilation of inorganic nitrogen was studied in P. denitrificans using 13N as tracer. At low concentrations (less than 10(-8) M) of labeled nitrate and nitrite 5 to 10% of the label was assimilated into non-volatile metabolites and 90 to 95% was reduced to N2. Similarly, with 15 mM [13N]nitrate, 5% of the label went into metabolites and 95% to N2. High pressure liquid chromatography analysis of the labeled metabolites indicated that the major pathway for assimilation of inorganic nitrogen in P. denitrificans under these conditions is through ammonia incorporation via the aspartase reaction. PMID:7372623

  1. Nitrogen input 15N-signatures are reflected in plant 15N natural abundances of N-rich tropical forest in China

    NASA Astrophysics Data System (ADS)

    Abdisa Gurmesa, Geshere; Lu, Xiankai; Gundersen, Per; Yunting, Fang; Mo, Jiangming

    2016-04-01

    In this study, we tested the measurement of natural abundance of 15N15N) for its ability to assess changes in N cycling due to increased N deposition in two forest types; namely, an old-growth broadleaved forest and a pine forest, in southern China. We measured δ15N values of inorganic N in input and output fluxes under ambient N deposition, and N concentration and δ15N of major ecosystem compartments under ambient and increased N deposition. Our results showed that N deposition to the forests was 15N-depleted, and was dominated by NH4-N. Plants were 15N-depleted due to imprint from the 15N-depleted atmospheric N deposition. The old-growth forest had larger N concentration and was more 15N-enriched than the pine forest. Nitrogen addition did not significantly affect N concentration, but it significantly increased δ15N values of plants, and slightly more so in the pine forest, toward the 15N signature of the added N in both forests. The result indicates that the pine forest may rely more on the 15N-depleted deposition N. Soil δ15N values were slightly decreased by the N addition. Our result suggests that ecosystem δ15N is more sensitive to the changes in ecosystem N status and N cycling than N concentration in N-saturated sub-tropical forests.

  2. Carbon-13, sup 15 N, and sup 31 P NMR studies on 6-hydroxy-L-nicotine oxidase from Arthrobacter oxidans

    SciTech Connect

    Pust, S.; Vervoort, J.; Decker, K.; Bacher, A.; Mueller, F. )

    1989-01-24

    The interaction between the apoprotein of 6-hydroxy-L-nicotine oxidase from Arthrobacter oxidans and the prosthetic group FAD has been investigated by {sup 13}C, {sup 15}N and {sup 31}P NMR techniques. The FAD prosthetic group was selectively enriched in {sup 13}C and {sup 15}N isotopes by adding isotopically labeled riboflavin derivatives to the growth medium of riboflavin-requiring mutant cells. In the oxidized state the chemical shift of the C(7) and C(8) atoms indicates that the xylene moiety of the isoalloxazine ring is embedded in a hydrophobic environment. The binding of the competitive inhibitor, 6-hydroxy-D-nicotine, influences the resonances of the C(4a) and the N(5) atom strongly. It is suggested that these shifts are due to a strong hydrogen-bonding interaction between the N(5) atom and the inhibitor. On reduction all resonances, except those of the C(10a) and the N(1) atoms, shift upfield, indicating the increased electron density in the ring system. It can unambiguously be concluded from the chemical shift of the N(1) atom that the reduced flavin is anionic. The doublet character of the N(3) and N(5) resonances suggests that bulk water has no access to the active center. The strong downfield shift of the N(1) position indicates that this atom is embedded in a polar environment, but it does not indicate the presence of a positively charged residue. The {sup 31}P NMR spectra show that the resonances of the pyrophosphate group of the bound FAD differ slightly from those of free FAD. Besides the {sup 31}P resonances from FAD, four peaks around 0 ppm are observed that belongs to bound phosphorus residues. The residues are not located close to the isoalloxazine ring.

  3. Identification and characterization of conservative organic tracers for use as hydrologic tracers for the Yucca Mountain Site characterization study. Progress report, January 1, 1995--March 31, 1995

    SciTech Connect

    Stetzenbach, K.; Farnham, I.

    1995-05-01

    Fluorinated organic acids were utilized in a test study as hydrologic tracers for the Yucca Mountain Project. Fluorinated acids included cinnamic acid; benzoic acid, and toluic acid. Results are discussed pertaining to retention time, elution time, and stability.

  4. THE NEW YORK CITY URBAN DISPERSION PROGRAM MARCH 2005 FIELD STUDY: TRACER METHODS AND RESULTS.

    SciTech Connect

    WATSON, T.B.; HEISER, J.; KALB, P.; DIETZ, R.N.; WILKE, R.; WIESER, R.; VIGNATO, G.

    2005-10-01

    The Urban Dispersion Program March 2005 Field Study tracer releases, sampling, and analytical methods are described in detail. There were two days where tracer releases and sampling were conducted. A total of 16.0 g of six tracers were released during the first test day or Intensive Observation Period (IOP) 1 and 15.7 g during IOP 2. Three types of sampling instruments were used in this study. Sequential air samplers, or SAS, collected six-minute samples, while Brookhaven atmospheric tracer samplers (BATS) and personal air samplers (PAS) collected thirty-minute samples. There were a total of 1300 samples resulting from the two IOPs. Confidence limits in the sampling and analysis method were 20% as determined from 100 duplicate samples. The sample recovery rate was 84%. The integrally averaged 6-minute samples were compared to the 30-minute samples. The agreement was found to be good in most cases. The validity of using a background tracer to calculate sample volumes was examined and also found to have a confidence level of 20%. Methods for improving sampling and analysis are discussed. The data described in this report are available as Excel files. An additional Excel file of quality assured tracer data for use in model validation efforts is also available. The file consists of extensively quality assured BATS tracer data with background concentrations subtracted.

  5. Identification and characterization of conservative organic tracers for use as hydrologic tracers for the Yucca Mountain Site Characterization study. [Quarterly] progress report, April 1, 1995--June 3, 1995

    SciTech Connect

    Stetzenbach, K.; Farnham, I.

    1995-08-01

    The focus for this quarter has been on completing the laboratory studies in preparation for the C-Well tracer tests. These studies include measuring the solubilities for each of the fluorinated benzoic acids as well as determining the stabilities of these compounds through both batch and column testing. A batch test for four pyridone compounds was also initiated. The Tracer QA procedures were approved by the YM USGS on May 24, 1995. The batch testing was repeated using these procedures.

  6. 15N chemical shift tensors and conformation of solid polypeptides containing 15N-labeled glycine residue by 15N NMR

    NASA Astrophysics Data System (ADS)

    Shoji, Akira; Ozaki, Takuo; Fujito, Teruaki; Deguchi, Kenzo; Ando, Isao; Magoshi, Jun

    1998-01-01

    The correlation between the isotropic 15N chemical shift ( δiso) and 15N chemical shift tensor components ( δ11, δ22 and δ33) and the main-chain conformation such as the polyglycine I (PGI: β-sheet), II (PGII: 3 1-helix), α-helix and β-sheet forms of solid polypeptides [Gly∗,X] n consisting of 15N-labeled glycine (Gly∗) and other amino acids (X: natural abundance of 15N) has been studied by solid-state 15N NMR method. A series of polypeptides [Gly∗,X] n (X = glycine, L-alanine, L-leucine, L-valine, L-isoleucine, β-benzyl L-aspartate, γ-benzyl L-glutamate, ɛ-carbobenzoxy L-lysine, and sarcosine) were synthesized by the α-amino acid N-carboxy anhydride (NCA) method. Conformations of these polypeptides in the solid state were characterized on the basis of conformation-dependent 13C chemical shifts in the 13C cross-polarization-magic angle spinning (CP-MAS) NMR spectra and by the characteristic bands in the IR and far-IR spectra. The δiso, δ11, δ22 and δ33 of the polypetides were determined from the 15N CP-MAS and 15N CP-static (powder pattern) spectra. It was found that the δiso, δ11, δ22 and δ33 in the PGI form (δ 83.5, 185, 40.7 and 25 ppm, resp.) are upfield from those in the PGII form (88.5, 194, 42.1 and 29 ppm, resp.), which were reproduced by the calculated 15N shielding constants using the finite perturbation theory (FPT)-INDO method. It was also found that the δ22 of the Gly∗ of [Gly∗,X] n is closely related to the main-chain conformation and the neighboring amino acid sequence, although the δiso is almost independent of the glycine content and conformation. Consequently, the δ22 value of Gly∗ containing copolypeptides is useful for the structural (main-chain conformation and neighboring amino acid sequence) analysis in the solid state by 15N NMR, if the 15N-labeled copolypeptide or natural protein can be provided. In addition, it is shown that the δiso of the glycine residue is useful for the conformational study of some

  7. Dye tracers as a tool for outfall studies: dilution measurement approach.

    PubMed

    Pecly, J O G; Roldão, J S F

    2013-01-01

    Dye tracer technique is well established and of wide application for assessment of outfalls and for delineation of near field and far field extensions. Common goals of a tracer study include the measurement of the dilution factor, estimation of the dispersion coefficients, measurement of the effluent discharge and calibration of a contaminant transport model. This paper presents a brief review of the methods involving the use of dye tracer for outfall assessment and illustrates the methods of slug release and continuous injection based on two real cases of campaigns carried out on Brazilian coastal waters. Slug injection on the surface of the water body was used for preliminary dispersion studies aiming at outfall positioning. During the operational phase of an outfall, the continuous injection of dye tracer was used to determine effluent dilution in different seasons. In coastal waters of Rio de Janeiro city, sea current pattern, tidal modulation and thermal stratification explained the main features of the dilution field.

  8. Measurement of 13C and 15N isotope labeling by gas chromatography/combustion/isotope ratio mass spectrometry to study amino acid fluxes in a plant-microbe symbiotic association.

    PubMed

    Molero, Gemma; Aranjuelo, Iker; Teixidor, Pilar; Araus, José Luis; Nogués, Salvador

    2011-03-15

    We have developed a method based on a double labeling with stable isotopes and gas chromatography/combustion/isotope ratio mass spectrometry (GC/C/IRMS) analyses to study amino acid exchange in a symbiotic plant-microbe association. Isotopic precision was studied for 21 standards including 15 amino acid derivatives, three N-protected amino acid methyl esters, three amines and one international standard. High correlations were observed between the δ(13)C and δ(15)N values obtained by GC/C/IRMS and those obtained by an elemental analyzer (EA) coupled to an isotope ratio mass spectrometer (R(2) = 0.9868 and 0.9992, respectively). The mean precision measured was 0.04‰ for δ(13)C and 0.28‰ for δ(15)N (n = 15). This method was applied in vivo to the symbiotic relationship between alfalfa (Medicago sativa L.) and N(2)-fixing bacteria. Plants were simultaneously labeled over 10 days with (13)C-depleted CO(2) ((12)CO(2)), which was assimilated through photosynthesis by leaves, and (15)N(2) fixed via nodules. Subsequently, the C and N isotope compositions (i.e. δ(13)C and δ(15)N) of free amino acids were analyzed in leaves and nodules by GC/C/IRMS. The method revealed the pattern of C and N exchange between leaves and nodules, highlighting that γ-aminobutanoic acid and glycine may represent an important form of C transport from leaves to the nodules. The results confirmed the validity, reliability and accuracy of the method for assessing C and N fluxes between plants and symbiotic bacteria and support the use of this technique in a broad range of metabolic and fluxomic studies.

  9. Beckmann rearrangement of 15N-cyclohexanone oxime on zeolites silicalite-1, H-ZSM-5, and H-[B]ZSM-5 studied by solid-state NMR spectroscopy.

    PubMed

    Marthala, V R Reddy; Jiang, Yijiao; Huang, Jun; Wang, Wei; Gläser, Roger; Hunger, Michael

    2006-11-22

    By means of solid-state 15N NMR spectroscopy, evidence for the formation of nitrilium ions as intermediates of the Beckmann rearrangement of 15N-cyclohexanone oxime to epsilon-caprolactam on silicalite-1, H-ZSM-5, and H-[B]ZSM-5 is reported. The zeolites under study are characterized by different acid strengths (silicalite-1 < H-[B]ZSM-5 < H-ZSM-5). Depending on the nature of catalytically active surface OH groups, reactant and product molecules exist in the nonprotonated or protonated state. In addition, formation of byproducts such as 5-cyano-1-pentene and epsilon-aminocapric acid as a result of dehydration and hydrolysis of the reactant and product molecules, respectively, were observed.

  10. Glass mixing theory and tracer study results from the SF-10 run

    SciTech Connect

    Bowman, B.W.; Routt, K.R.

    1988-08-01

    A general, partial differential equation governing glass mixing in the Slurry Fed Ceramic Melter (SFCM) was derived and a solution obtained based upon certain simplifying assumptions. Tracer studies were then conducted in the SFCM during the SF-10 run to test the theory and characterize glass mixing in this melter. Analysis of the tracer data shows that glass mixing in the SFCM can be explained by use of a model of two, well-mixed tanks in series.

  11. (15)N Heteronuclear Chemical Exchange Saturation Transfer MRI.

    PubMed

    Zeng, Haifeng; Xu, Jiadi; Yadav, Nirbhay N; McMahon, Michael T; Harden, Bradley; Frueh, Dominique; van Zijl, Peter C M

    2016-09-01

    A two-step heteronuclear enhancement approach was combined with chemical exchange saturation transfer (CEST) to magnify (15)N MRI signal of molecules through indirect detection via water protons. Previous CEST studies have been limited to radiofrequency (rf) saturation transfer or excitation transfer employing protons. Here, the signal of (15)N is detected indirectly through the water signal by first inverting selectively protons that are scalar-coupled to (15)N in the urea molecule, followed by chemical exchange of the amide proton to bulk water. In addition to providing a small sensitivity enhancement, this approach can be used to monitor the exchange rates and thus the pH sensitivity of the participating (15)N-bound protons. PMID:27548755

  12. Urban Dispersion Program MSG05 Field Study: Summary of Tracer and Meteorological Measurements

    SciTech Connect

    Allwine, K Jerry; Flaherty, Julia E.

    2006-08-09

    The Urban Dispersion Program is a multi-year project, funded by the U.S. Department of Homeland Security, to better understand the flow and dispersion of airborne contaminants through and around the deep street canyons of New York City. The first tracer and meteorological field study was a limited study conducted during March 2005 near the Madison Square Garden in midtown Manhattan. Six safe, inert, gaseous perfluorocarbon tracers were released simultaneously at five street-level locations during two experimental days. In addition to collecting tracer data, meteorological data were also collected. Brookhaven National Laboratory conducted the bulk of the tracer and meteorological field efforts with Pacific Northwest National Laboratory and Stevens Institute of Technology assisting by measuring the vertical profile of winds. The Environmental Protection Agency worked with Brookhaven National Laboratory in accomplishing the personal exposure component of the study. This report presents some results from this analysis. In general, different release locations showed vastly different plume footprints for tracer materials, and the situation was made very complex with upwind and/or crosswind transport of tracer near street-level for the different release locations. Overall wind speeds and directions upwind and over the city were generally constant throughout each of the two experimental periods.

  13. Toward hyperpolarized molecular imaging of HIV: synthesis and longitudinal relaxation properties of 15N-Azidothymidine

    PubMed Central

    Shchepin, Roman V.; Chekmenev, Eduard Y.

    2015-01-01

    Previously unreported 15N labeled Azidothymidine (AZT) was prepared as an equimolar mixture of two isotopomers: 1-15N-AZT and 3-15N-AZT. Polarization decay of 15N NMR signal was studied in high (9.4 T) and low (~50 mT) magnetic fields. 15N T1 values were 45 ± 5 s (1-15N-AZT) and 37 ± 2 s (3-15N-AZT) at 9.4 T, and 140 ± 16 s (3-15N-AZT) at 50 mT. 15N-AZT can be potentially 15N hyperpolarized by several methods. These sufficiently long 15N-AZT T1 values potentially enable hyperpolarized in vivo imaging of 15N-AZT, because of the known favorable efficient (i.e., of the time scale shorter than the longest reported here 15N T1) kinetics of uptake of injected AZT. Therefore, 3-15N-AZT can be potentially used for HIV molecular imaging using hyperpolarized magnetic resonance imaging. PMID:25156931

  14. Study of the neutron and proton capture reactions 10,11B(n, γ), 11B(p, γ), 14C(p, γ), and 15N(p, γ) at thermal and astrophysical energies

    NASA Astrophysics Data System (ADS)

    Dubovichenko, Sergey; Dzhazairov-Kakhramanov, Albert

    2014-07-01

    We have studied the neutron-capture reactions 10,11B(n, γ) and the role of the 11B(n, γ) reaction in seeding r-process nucleosynthesis. The possibility of the description of the available experimental data for cross-sections of the neutron capture reaction on 10B at thermal and astrophysical energies, taking into account the resonance at 475 keV, was considered within the framework of the modified potential cluster model (MPCM) with forbidden states (FS) and accounting for the resonance behavior of the scattering phase shifts. In the framework of the same model, the possibility of describing the available experimental data for the total cross-sections of the neutron radiative capture on 11B at thermal and astrophysical energies were considered with taking into account the 21 and 430 keV resonances. Description of the available experimental data on the total cross-sections and astrophysical S-factor of the radiative proton capture on 11B to the GS of 12C was treated at astrophysical energies. The possibility of description of the experimental data for the astrophysical S-factor of the radiative proton capture on 14C to the GS of 15N at astrophysical energies, and the radiative proton capture on 15N at the energies from 50 to 1500 keV was considered in the framework of the MPCM with the classification of the orbital states according to Young tableaux. It was shown that, on the basis of the M1 and the E1 transitions from different states of the p15N scattering to the GS of 16O in the p15N channel, it is quite succeed to explain general behavior of the S-factor in the considered energy range in the presence of two resonances.

  15. Revisiting the use of δ15N in meso-scale studies of marine food webs by considering spatio-temporal variations in stable isotopic signatures - The case of an open ecosystem: The Bay of Biscay (North-East Atlantic)

    NASA Astrophysics Data System (ADS)

    Chouvelon, T.; Spitz, J.; Caurant, F.; Mèndez-Fernandez, P.; Chappuis, A.; Laugier, F.; Le Goff, E.; Bustamante, P.

    2012-08-01

    Most of the recent framework directives and environmental policies argue for the development and the use of indicators - notably trophodynamic indicators - that should be able to follow ecosystems' evolution in space and time, particularly under anthropogenic perturbations. In the last decades, the use of stable carbon and nitrogen isotopes ratios has increased exponentially, particularly in studies of marine ecosystems' trophic structure and functioning. This method is principally based on the assumption that the isotopic composition of a consumer directly reflects that of its food. Nevertheless, few studies have attempted to define the limits of this tool, before using it and drawing ecological conclusions from isotopic analysis. This study aimed to assess the importance of considering spatio-temporal variations in isotopic signatures of consumers when using δ13C and especially δ15N values in open ecosystems with complex food webs, using the Bay of Biscay (North-East Atlantic) as a case study. To this end, more than 140 species from this marine ecosystem were analysed for the isotopic signatures in their muscle tissue. They were sampled from coastal to oceanic and deep-sea areas and at different latitudes, to evaluate spatial variations of isotopic signatures. Selected species were also sampled over several years and in two seasons to account for inter-annual and seasonal variations. In the Bay of Biscay temperate ecosystem, which is subject to both coastal and oceanic influences - two main river inputs and upwelling areas - , δ13C and δ15N values significantly decreased from inshore to offshore species, and to a lesser extent from benthic to pelagic organisms. River discharges appeared to be the first factor influencing δ13C and δ15N values in consumers. From the important spatial variations detected in δ15N values in particular, we suggest that in such contrasted ecosystem, nitrogen isotopic ratios may also be revisited as an indicator of the feeding

  16. Phenylalanine δ15N in Paleo Archives as a New Proxy for δ15N of Exported Primary Production

    NASA Astrophysics Data System (ADS)

    McCarthy, M.; Batista, F. C.; Vokhshoori, N. L.; Brown, J. T.; Guilderson, T. P.; Ravelo, A. C.; Sherwood, O.

    2012-12-01

    Compound-specific isotope analysis of individual amino acids (CSI-AA) is emerging as a powerful new tool for studying the paleo nitrogen cycle. Because most detrital organic nitrogen is composed of amino acids, CSI-AA can reveal the mechanistic basis for organic nitrogen diagenesis, preserve a record of past food web structure, and potentially reconstruct the δ15N values of past nitrate and primary production. Within the commonly measured amino acids, the δ15N value of phenylalanine (Phe) appears uniquely promising as a new proxy that reflects the nitrogen isotopic value of the original source. Phe δ15N values remain almost unchanged with trophic transfer through food webs, and also during at least the initial stages of organic matter degradation. Here we synthesize results from both bio-archives and recent sediments, which together suggest that at least in Holocene archives the Phe δ15N value does in fact record the average inorganic nitrogen δ15N value at the base of planktonic food webs. However, several important unknowns also remain. These include the extent of variation in amino acid isotopic fractionation patterns in phylogenetically distinct algal groups. The stability of Phe δ15N values in older sediments where organic matter has undergone extensive diagenesis is also an important research area, which may ultimately establish the temporal limit for application of this approach to study past geological epochs. Together, however, results to date suggest that of Phe δ15N values in paleo archives represent a novel molecular-level proxy which is not tied to any specific organism or group, but rather can provide an integrated estimate of δ15N value of exported primary production.

  17. Using Biofuel Tracers to Study Alternative Combustion Regimes

    SciTech Connect

    Mack, J H; Flowers, D L; Buchholz, B A; Dibble, R W

    2006-02-14

    Interest in the use of alternative fuels and combustion regimes is increasing as the price of petroleum climbs. The inherently higher efficiency of Diesel engines has led to increased adoption of Diesels in Europe, capturing approximately 40% of the new passenger car market. Unfortunately, lower CO{sub 2} emissions are countered with higher nitrogen oxides (NOx) and particulate matter (PM) emissions, and higher noise. Noise and PM have traditionally been the obstacles toward consumer acceptance of Diesel passenger cars in North America, while NOx (a key component in photochemical smog) has been more of an engineering challenge. Diesels are lean burning (combustion with excess oxygen) and reducing NOx to N2 in an oxygen rich environment is difficult. Adding oxygenated compounds to the fuel helps reduce PM emissions, but relying on fuel alone to reduce PM is unrealistic. Keeping peak combustion temperature below 1700 K prevents NOx formation. Altering the combustion regime to burn at temperatures below the NOx threshold and accept a wide variety of fuels seems like a promising alternative for future engines. Homogeneous Charge Compression Ignition (HCCI) is a possible solution. Fuel and air are well mixed prior to intake into a cylinder (homogeneous charge) and ignition occurs by compression of the fuel-air mixture by the piston. HCCI is rapid and relatively cool, producing little NOx and PM. Unfortunately, it is hard to control since HCCI is initiated by temperature and pressure instead of a spark or direct fuel injection. We investigate biofuel HCCI combustion, and use intrinsically labeled biofuels as tracers of HCCI combustion. Data from tracer experiments are used to validate combustion modeling.

  18. Plan of study to determine if the isotopic ratios [delta]15 N and [delta]18 O can reveal the sources of nitrate discharged by the Mississippi River into the Gulf of Mexico

    USGS Publications Warehouse

    Battaglin, William A.; Kendall, Carol; Goolsby, Donald A.; Boyer, Laurie L.

    1997-01-01

    Nitrate and other nutrients discharged from the Mississippi River basin are suspected of causing a zone of depleted dissolved oxygen (hypoxic zone) in the Gulf of Mexico each summer. The hypoxic zone may have an adverse effect on aquatic life and commercial fisheries. Commercial fertilizers are the dominant source of nitrogen input to the Mississippi basin. Other nitrogen sources include animal waste, fixation of atmospheric nitrogen by legumes, precipitation, domestic and industrial effluent, and the soil. The inputs of nitrogen from most of these sources to the Mississippi basin can be estimated and the outputs in surface water can be measured. However, nitrogen from each source is affected differently by physical, chemical, and biological processes that control nitrogen cycling in terrestrial and aquatic systems. Hence, the relative contributions from the various sources of nitrogen to nitrate load in the Mississippi River are unknown because the different sources may not contribute proportionally to their inputs in the basin. It may be possible to determine the relative contributions of the major sources of nitrate in river water using the stable isotopic ratios d15N and d18O of the nitrate ion. A few researchers have used the d15N and/or d18O isotope ratios to determine sources of nitrate in ground water, headwater catchments, and small rivers, but little is known about the isotopic composition of nitrate in larger rivers. The objective of this study is to measure the isotopic composition of nitrate and suspended organic matter in the Mississippi River and its major tributaries, in discharge to the Gulf of Mexico, and in streamflow from smaller watersheds that have distinct sources of nitrogen (row crops, animal wastes, and urban effluents) or are minimally impacted by man (undeveloped). Samples from seven sites on the Mississippi River and its tributaries and from 17 sites in smaller watersheds within the Mississippi River basin will be analyzed for d15N and

  19. Nitrate Removal in Two Relict Oxbow Urban Wetlands: A 15N Mass-balance Approach

    EPA Science Inventory

    A 15N-tracer method was used to quantify nitrogen (N) removal processes in two relict oxbow wetlands located adjacent to the Minebank Run restored stream reach in Baltimore County (Maryland, USA) during summer 2009 and early spring 2010. A mass-balance approach was used to determ...

  20. Estimation of road traffic emission factors from a long term tracer study

    NASA Astrophysics Data System (ADS)

    Belalcazar, Luis Carlos; Fuhrer, Oliver; Ho, Minh Dung; Zarate, Erika; Clappier, Alain

    2009-12-01

    Road traffic emissions, one of the largest source categories in megacity inventories, are highly uncertain. It is essential to develop methodologies to reduce these uncertainties to manage air quality more effectively. In this paper, we propose a methodology to estimate road traffic emission factors (EFs) from a tracer experiment and from roadside pollutants measurements. We emitted continuously during about 300 non-consecutive hours a passive tracer from a finite line source placed on one site of an urban street. At the same time, we measured continuously the resulting tracer concentrations at the other side of the street with a portable on-line gas chromatograph. We used n-propane contained in commercial liquid petroleum gas (LPG) as a passive tracer. Propane offers several advantages to traditional tracers (SF6, N2O, CFCs): low price, easily available, non-reactive, negligible global warming potential, and easy to detect with commercial on-line gas chromatographs. The tracer experiment was carried out from January to March 2007 in a busy street of Ho Chi Minh City (Vietnam). Traffic volume, weather information and pollutant concentrations were also measured at the measurement site. We used the results of the tracer experiment to calculate the dilution factors and afterwards we used these dilution factors, the traffic counts and the pollutant concentrations to estimate the EFs. The proposed method assumes that the finite emission line represents the emission produced by traffic in the full area of the street and therefore there is an error associated to this assumption. We use the Computational Fluids Dynamics (CFD) model MISKAM to calculate this error and to correct the HCMC EFs. EFs for 15 volatile organic compounds (VOCs) and NO are reported here. A comparison with available studies reveals that most of the EFs estimated here are within the range of EFs reported in other studies.

  1. Study of stability zone influences and tracer patterns from the 1987 ANATEX (Across North America Tracer Experiment) experiment

    SciTech Connect

    Porch, W.M.; Gifford, F.A.; Hoard, D.E.

    1988-01-01

    In this paper, we will show preliminary results which appear to connect much of the hit and miss behavior of the surface tracer samples to large scale stability zones 100 to 1000 km wide. With these wintertime stability effects in mind, we have done the best we can to characterize the observed overall tracer patterns as well as individual tracer releases. This type of survey information is important to numerical model development. Diagnostic models often have difficulty reproducing surface plume concentrations where transport over stable layers have occurred. Prognostic models can, in theory, model effects of strong stable layers. However, these models would have great difficulty predicting large scale stable regions such as those observed during ANATEX. Also, though these models have ways of budging in synoptic wind fields, temperature observations are presently ignored. This is because if both wind and temperature observations are forced too strongly into the model, conflicting results may be produced. 12 refs., 5 figs.

  2. NMR studies on /sup 15/N-labeled creatine (CR), creatinine (CRN), phosphocreatine (PCR), and phosphocreatinine (PCRN), and on barriers to rotation in creatine kinase-bound creatine in the enzymatic reaction

    SciTech Connect

    Kenyon, G.L.; Reddick, R.E.

    1986-05-01

    Recently, the authors have synthesized /sup 15/N-2-Cr, /sup 15/N-3-Crn, /sup 15/N-2-Crn, /sup 15/N-3-PCrn, /sup 15/N-3-PCr, and /sup 15/N-2-PCr. /sup 1/H, /sup 15/N, /sup 31/P NMR data show that Crn protonates exclusively at the non-methylated ring nitrogen, confirm that PCrn is phosphorylated at the exocyclic nitrogen, and demonstrate that the /sup 31/P-/sup 15/N one-bond coupling constant in /sup 15/N-3-PCr is 18 Hz, not 3 Hz as previously reported by Brindle, K.M., Porteous, R. and Radda, G.K.. The authors have found that creatine kinase is capable of catalyzing the /sup 14/N//sup 15/N positional isotope exchange of 3-/sup 15/N-PCr in the presence of MgADP, but not in its absence. Further, the exchange does not take place when labeled PCr is resynthesized exclusively from the ternary complex E X Cr X MgATP as opposed to either E X Cr or free Cr. This suggests that the enzyme both imparts an additional rotational barrier to creatine in the complex and catalyzes the transfer of phosphoryl group with essentially complete regiospecificity.

  3. 15N Hyperpolarization by Reversible Exchange Using SABRE-SHEATH

    PubMed Central

    2016-01-01

    NMR signal amplification by reversible exchange (SABRE) is a NMR hyperpolarization technique that enables nuclear spin polarization enhancement of molecules via concurrent chemical exchange of a target substrate and parahydrogen (the source of spin order) on an iridium catalyst. Recently, we demonstrated that conducting SABRE in microtesla fields provided by a magnetic shield enables up to 10% 15N-polarization (Theis, T.; et al. J. Am. Chem. Soc.2015, 137, 1404). Hyperpolarization on 15N (and heteronuclei in general) may be advantageous because of the long-lived nature of the hyperpolarization on 15N relative to the short-lived hyperpolarization of protons conventionally hyperpolarized by SABRE, in addition to wider chemical shift dispersion and absence of background signal. Here we show that these unprecedented polarization levels enable 15N magnetic resonance imaging. We also present a theoretical model for the hyperpolarization transfer to heteronuclei, and detail key parameters that should be optimized for efficient 15N-hyperpolarization. The effects of parahydrogen pressure, flow rate, sample temperature, catalyst-to-substrate ratio, relaxation time (T1), and reversible oxygen quenching are studied on a test system of 15N-pyridine in methanol-d4. Moreover, we demonstrate the first proof-of-principle 13C-hyperpolarization using this method. This simple hyperpolarization scheme only requires access to parahydrogen and a magnetic shield, and it provides large enough signal gains to enable one of the first 15N images (2 × 2 mm2 resolution). Importantly, this method enables hyperpolarization of molecular sites with NMR T1 relaxation times suitable for biomedical imaging and spectroscopy. PMID:25960823

  4. Results of Chemical Analyses for Alcove 8/Niche 3 Tracer Studies

    SciTech Connect

    Daniels, Jeanette

    2006-02-23

    This is the final report detailing the analyses performed under ORD-FY04-011 "Chemical Analyses for Alcove 8/Niche 3 Tracer Studies." The work was performed under the University and Community College System of Nevada (UCCSN) and the Department of Energy (DOE) Cooperative Agreement Number DE-FC28-04RW12232. This task provided method development and analytical support for the Alcove 8/Niche 3 Tracer Studies in the Exploratory Studies Facility (ESF). Concentrations of tracers, as well as major anions and cations, were reported for samples provided by Lawrence Berkeley National Laboratory (LBNL) and the US Geological Survey (USGS). Samples were analyzed using High Performance Liquid Chromatography (HPLC) and Ion Chromatography (IC). Samples were analyzed and controlled according to Implementing Procedures (IP's) written and approved in accordance with the Office of Civilian Radioactive Waste Management (OCRWM) approved Nevada System of Higher Education (NSHE) Quality Assurance Program.

  5. Efficacy of seven retrograde tracers, compared in multiple-labelling studies of feline motoneurones.

    PubMed

    Richmond, F J; Gladdy, R; Creasy, J L; Kitamura, S; Smits, E; Thomson, D B

    1994-07-01

    The labelling efficacies of 7 retrograde tracers were evaluated following cut nerve exposure or intramuscular injection into the serially compartmentalized neck muscle, biventer cervicis. Tested tracers included Fast Blue (FB), Fluorogold (FG), dextran conjugated to fluorescein (FD), dextran conjugated to rhodamine (Fluororuby (FR), 3000 and 10,000 MW), fluorescent latex microspheres, horseradish peroxidase coupled to colloidal gold, and 1,1'-dioctadecyl-3,3,3',3'-tetramethyl indocarbocyanine perchlorate (DiI). In 2 animals, horseradish peroxidase was also employed and spinal cords were processed for peroxidase activity to evaluate its effect on the appearance of cells labelled with fluorescent tracers. Four tracers, FB, FG, FD and FR, could be observed in motoneurones under the conditions of our study. FB and FG labelled comparable numbers of motoneurones following cut nerve exposure, but dissimilar numbers following intramuscular injection. FG diffused extensively following injection and was found in motoneurones not only in the appropriate ipsilateral segment but also adjacent ipsilateral and contralateral segments. Intramuscular injections of FB usually labelled fewer cells than cut nerve exposure, but evidence for spurious labelling following intramuscular injection could also be found. FD or FR labelled motoneurones following cut nerve exposure but not following intramuscular injection. The conjugated dextrans labelled more variable numbers of cells than FB or FG, but the labelled cells had similar patterns of distribution. The remaining tracers were ineffective as retrograde markers in our study, and the possible reasons for these failures are discussed.

  6. Identification and characterization of conservative organic tracers for use as hydrologic tracers for the Yucca Mountain Site Characterization Study. Progress report, July 1, 1994--September 30, 1994

    SciTech Connect

    Stetzenbach, K.

    1994-12-01

    The work performed during this quarter consists of the continuation of the batch studies for the fluorinated benzoic acids and the evaluation of LC/MS for the analysis of these potential tracers. Column studies for these compounds have also been initiated.

  7. The use of Na-22 as a tracer for long-term bone mineral turnover studies.

    NASA Technical Reports Server (NTRS)

    Palmer, H. E.; Rieksts, G. A.; Palmer, R. F.; Gillis, M. F.

    1979-01-01

    Sodium-22 has been studied as a tracer for bone mineral metabolism in rats and dogs. When incorporated into bone during growth from birth to adulthood, the bone becomes uniformly tagged with Na-22, which is released through the metabolic turnover of the bone. The Na-22 not incorporated in the bone matrix is rapidly excreted within a few days when animals are fed high, but nontoxic levels of NaCl. The Na-22 tracer can be used to measure bone mineral loss in animals during space flight and in research on bone disease.

  8. Identification and characterization of conservative organic tracers for use as hydrologic tracers for the Yucca Mountain site characterization study. Progress report, October 1, 1994--December 31, 1994

    SciTech Connect

    Stetzenbach, K.; Farnham, I.

    1994-12-31

    The bromide anion has been used extensively as a tracer for mapping the flow of groundwater. It has proven to be both a safe and reliable groundwater tracer. The goal in this study is to find several tracing compounds with characteristics similar to the bromide anion to be used in multiple well tracing tests. Four groups of fluorinated organic acids were selected as candidates for groundwater tracers. These groups include fluorinated benzoic acids (FBA), fluorinated salicylic acids (FSA), fluorinated toluic acids (FTA), and fluorinated cinnamic acids (FCA). These compounds have been shown to move readily with the flow of water and do not adsorb to soil. They are also non-toxic. In this study, the retention of the fluorinated organic acids on to a soil column is compared to that of the bromide ion. The time required for the elution of each analyte from the soil column is measured using a UV-Vis detector. The soils consist of the light, medium, and dark tuffs used in the batch study. The work performed during this quarter consists of the continuation of the batch studies for the fluorinated benzoic acids and column studies for several potential tracer compounds.

  9. Study of stereospecificity of 1H, 13C, 15N and 77Se shielding constants in the configurational isomers of the selenophene-2-carbaldehyde azine by NMR spectroscopy and MP2-GIAO calculations.

    PubMed

    Afonin, Andrei V; Pavlov, Dmitry V; Albanov, Alexander I; Levanova, Ekaterina P; Levkovskaya, Galina G

    2011-11-01

    In the (1)H and (13)C NMR spectra of selenophene-2-carbaldehyde azine, the (1)H-5, (13)C-3 and (13)C-5 signals of the selenophene ring are shifted to higher frequencies, whereas those of the (1)H-1, (13)C-1, (13)C-2 and (13)C-4 are shifted to lower frequencies on going from the EE to ZZ isomer or from the E moiety to the Z moiety of EZ isomer. The (15)N chemical shift is significantly larger in the EE isomer relative to the ZZ isomer and in the E moiety relative to the Z moiety of EZ isomer. A very pronounced difference (60-65 mg/g) between the (77)Se resonance positions is revealed in the studied azine isomers, the (77)Se peak being shifted to higher frequencies in the ZZ isomer and in the Z moiety of EZ isomer. The trends in the changes of the measured chemical shifts are reasonably reproduced by the GIAO calculations at the MP2 level of the (1)H, (13)C, (15)N and (77)Se shielding constants in the energy-favorable conformation with the syn orientation of both selenophene rings relative to the C = N groups. The NBO analysis suggests that such an arrangement of the selenophene rings may take place because of a higher energy of some intramolecular interactions. PMID:22002712

  10. USING CONTINUOUS MONITORS FOR CONDUCTING TRACER STUDIES IN WATER DISTRIBUTION SYSTEMS

    EPA Science Inventory

    The use of online monitors for conducting a distribution system tracer study is proving to be an essential tool to accurately understand the flow dynamics in a distribution system. In a series of field testing sponsored by U. S. Environmental Protection Agency (EPA) and Greater ...

  11. Discovery of Phosphodiesterase 10A (PDE10A) PET Tracer AMG 580 to Support Clinical Studies.

    PubMed

    Hu, Essa; Chen, Ning; Kunz, Roxanne K; Hwang, Dah-Ren; Michelsen, Klaus; Davis, Carl; Ma, Ji; Shi, Jianxia; Lester-Zeiner, Dianna; Hungate, Randall; Treanor, James; Chen, Hang; Allen, Jennifer R

    2016-07-14

    We report the discovery of PDE10A PET tracer AMG 580 developed to support proof of concept studies with PDE10A inhibitors in the clinic. To find a tracer with higher binding potential (BPND) in NHP than our previously reported tracer 1, we implemented a surface plasmon resonance assay to measure the binding off-rate to identify candidates with slower washout rate in vivo. Five candidates (2-6) from two structurally distinct scaffolds were identified that possessed both the in vitro characteristics that would favor central penetration and the structural features necessary for PET isotope radiolabeling. Two cinnolines (2, 3) and one keto-benzimidazole (5) exhibited PDE10A target specificity and brain uptake comparable to or better than 1 in the in vivo LC-MS/MS kinetics distribution study in SD rats. In NHP PET imaging study, [(18)F]-5 produced a significantly improved BPND of 3.1 and was nominated as PDE10A PET tracer clinical candidate for further studies. PMID:27437084

  12. Technical Secondary Schools and the Labour Market: Some Results from a Tracer Study in Kenya.

    ERIC Educational Resources Information Center

    Narman, Anders

    1988-01-01

    Reports tracer studies of Kenyan youths leaving technical school to determine their success at obtaining gainful employment. Almost 43% were neither in formal schooling nor training, nor employed a year after leaving, although technical skills were seen as useful, particularly in private life. (DP)

  13. Refining cotton-wick method for 15N plant labelling.

    NASA Astrophysics Data System (ADS)

    Fustec, Joëlle; Mahieu, Stéphanie

    2010-05-01

    The symbiosis Fabaceae/Rhizobiaceae plays a critical role in the nitrogen cycle. It gives the plant the ability to fix high amounts of atmospheric N. A part of this N can be transferred to the soil via rhizodeposition. The contribution of Fabaceae to the soil N pool is difficult to measure, since it is necessary for assessing N benefits for other crops, for soil biological activity, and for reducing water pollution in sustainable agriculture (Fustec, 2009). The aim of this study was to test and improve the reliability of the 15N cotton-wick method for measuring the soil N derived from plant rhizodeposition (Mahieu et al., 2007). The effects of the concentration of the 15N-urea labelling solution and of the feeding frequency (continuous or pulses) on the assessment of nitrogen rhizodeposition were studied in two greenhouse experiments using the field pea (Pisum sativum L.) and the non-nodulating isoline P2. The plant parts and the soil were prepared for 15N:14N measurements for assessing N rhizodeposition (Mahieu et al., 2009). The fraction of plants' belowground nitrogen allocated to rhizodeposition in both Frisson pea and P2 was 20 to more than 50% higher when plants were labelled continuously than when they were labelled using fortnightly pulses. Our results suggested that when 15N root enrichment was high, nitrogen rhizodeposition was underestimated only for plants that were 15N-fed by fortnightly pulses, and not in plants 15N-fed continuously. This phenomenon was especially observed for plants relying on symbiotic N fixation for N acquisition; it may be linked to the concentration of the labelling solution. In conclusion, N rhizodeposition assessment was strongly influenced by the 15N-feeding frequency and the concentration of the labelling solution. The estimation of N rhizodeposition was more reliable when plants were labelled continuously with a dilute solution of 15N urea. Fustec et al. 2009. Agron. Sustain. Dev., DOI 10.1051/agro/2009003, in press. Mahieu

  14. Numerical Simulations and Tracer Studies as a Tool to Support Water Circulation Modeling in Breeding Reservoirs

    NASA Astrophysics Data System (ADS)

    Zima, Piotr

    2014-12-01

    The article presents a proposal of a method for computer-aided design and analysis of breeding reservoirs in zoos and aquariums. The method applied involves the use of computer simulations of water circulation in breeding pools. A mathematical model of a pool was developed, and a tracer study was carried out. A simplified model of two-dimensional flow in the form of a biharmonic equation for the stream function (converted into components of the velocity vector) was adopted to describe the flow field. This equation, supplemented by appropriate boundary conditions, was solved numerically by the finite difference method. Next, a tracer migration equation was solved, which was a two-dimensional advection-dispersion equation describing the unsteady transport of a non-active, permanent solute. In order to obtain a proper solution, a tracer study (with rhodamine WT as a tracer) was conducted in situ. The results of these measurements were compared with numerical solutions obtained. The results of numerical simulations made it possible to reconstruct water circulation in the breading pool and to identify still water zones, where water circulation was impeded.

  15. Isotope pattern deconvolution as rising tool for isotope tracer studies in environmental research

    NASA Astrophysics Data System (ADS)

    Irrgeher, Johanna; Zitek, Andreas; Prohaska, Thomas

    2014-05-01

    During the last decade stable isotope tracers have emerged as versatile tool in ecological research. Besides 'intrinsic' isotope tracers caused by the natural variation of isotopes, the intentional introduction of 'extrinsic' enriched stable isotope tracers into biological systems has gained significant interest. Hereby the induced change in the natural isotopic composition of an element allows amongst others for studying the fate and fluxes of metals, trace elements and species in organisms or provides an intrinsic marker or tag of particular biological samples. Due to the shoreless potential of this methodology, the number of publications dealing with applications of isotope (double) spikes as tracers to address research questions in 'real world systems' is constantly increasing. However, some isotope systems like the natural Sr isotopic system, although potentially very powerful for this type of application, are still rarely used, mainly because their adequate measurement/determination poses major analytical challenges; as e.g. Sr is available in significant amounts in natural samples. In addition, biological systems underlie complex processes such as metabolism, adsorption/desorption or oxidation/reduction. As a consequence, classic evaluation approaches such as the isotope dilution mass spectrometry equation are often not applicable because of the unknown amount of tracer finally present in the sample. Isotope pattern deconvolution (IPD), based on multiple linear regression, serves as simplified alternative data processing strategy to double spike isotope dilution calculations. The outstanding advantage of this mathematical tool lies in the possibility of deconvolving the isotope pattern in a spiked sample without knowing the quantities of enriched isotope tracer being incorporated into the natural sample matrix as well as the degree of impurities and species-interconversion (e.g. from sample preparation). Here, the potential of IPD for environmental tracer

  16. Regulation of [15N]urea synthesis from [5-15N]glutamine. Role of pH, hormones, and pyruvate.

    PubMed

    Nissim, I; Yudkoff, M; Brosnan, J T

    1996-12-01

    We have utilized both [5-15N]glutamine and [3-13C] pyruvate as metabolic tracers in order to: (i) examine the effect of pH, glucagon (GLU), or insulin on the precursor-product relationship between 15NH3, [15N]citrulline, and, thereby, [15N]urea synthesis and (ii) elucidate the mechanism(s) by which pyruvate stimulates [15N] urea synthesis. Hepatocytes isolated from rat were incubated at pH 6.8, 7.4, or 7.6 with 1 mM [5-15N]glutamine and 0.1 mM 14NH4Cl in the presence or the absence of [3-13C] pyruvate (2 mM). A separate series of experiments was performed at pH 7.4 in the presence of insulin or GLU. 15NH3 enrichment exceeded or was equal to that of [15N]citrulline under all conditions except for pH 7.6, when the 15N enrichment in citrulline exceeded that in ammonia. The formation of [15N]citrulline (atom % excess) was increased with higher pH. Flux through phosphate-dependent glutaminase (PDG) and [15N]urea synthesis were stimulated (p < 0.05) at pH 7.6 or with GLU and decreased (p < 0.05) at pH 6.8. Insulin had no significant effect on flux through PDG or on [15N]urea synthesis. Decreased [15N]urea production at pH 6.8 was associated with depleted aspartate and glutamate levels. Pyruvate attenuated this decrease in the aspartate and glutamate pools and stimulated [15N]urea synthesis. Production of Asp from pyruvate was increased with increasing medium pH. Approximately 80% of Asp was derived from [3-13C]pyruvate regardless of incubation pH or addition of hormone. Furthermore, approximately 20, 40, and 50% of the mitochondrial N-acetylglutamate (NAG) pool was derived from [3-13C]pyruvate at pH 6.8, 7.4, and 7.6, respectively. Both the concentration and formation of [13C]NAG from [3-13C]pyruvate were increased (p < 0.05) with glucagon and decreased (p < 0.05) with insulin or at pH 6.8. The data suggest a correlation between changes in [15N]urea synthesis and alterations in the level and synthesis of [13C]NAG from pyruvate. The current observations suggest that the

  17. Theoretical studies of the substitution patterns of boron-nitrogen (BN) fullerenes: from C50 up to C20B15N15 CBN ball.

    PubMed

    Xu, Xiufang; Shang, Zhenfeng; Wang, Guichang; Li, Ruifang; Cai, Zunsheng; Zhao, Xuezhuang

    2005-04-28

    Study on the patterns of successive BN pair substitution in C50 fullerene and the chemical and electronic properties of these substitutionally doped heterofullerenes has been carried out with semiempirical (AM1 and MNDO) and density functional (B3LYP/3-21G) theories. The BN units prefer to stay together following "single bond", "hexagon filling", and "continuity and equatorial belt" rules. The driving force governing the stabilities of these BN-doped fullerenes is the strain of the cage. Compared with C50, the redox activity of C50-2x(BN)x (x = 1-15) isomers decreases and becomes weaker by increasing the number of BN units, while the aromaticity of the C50-2x(BN)x derivatives decreases and is independent of the number of BN units but related to the substitution positions. The main infrared absorptions are similar for all the C50-2x(BN)x isomers and the infrared spectrum becomes simpler and stronger with increasing the number of BN groups.

  18. NMR study of non-structural proteins--part II: (1)H, (13)C, (15)N backbone and side-chain resonance assignment of macro domain from Venezuelan equine encephalitis virus (VEEV).

    PubMed

    Makrynitsa, Garyfallia I; Ntonti, Dioni; Marousis, Konstantinos D; Tsika, Aikaterini C; Lichière, Julie; Papageorgiou, Nicolas; Coutard, Bruno; Bentrop, Detlef; Spyroulias, Georgios A

    2015-10-01

    Macro domains consist of 130-190 amino acid residues and appear to be highly conserved in all kingdoms of life. Intense research on this field has shown that macro domains bind ADP-ribose and other similar molecules, but their exact function still remains intangible. Macro domains are highly conserved in the Alphavirus genus and the Venezuelan equine encephalitis virus (VEEV) is a member of this genus that causes fatal encephalitis to equines and humans. In this study we report the high yield recombinant expression and preliminary solution NMR study of the macro domain of VEEV. An almost complete sequence-specific assignment of its (1)H, (15)N and (13)C resonances was obtained and its secondary structure predicted by TALOS+. The protein shows a unique mixed α/β-fold.

  19. Radio-tracer techniques for the study of flow in saturated porous materials

    USGS Publications Warehouse

    Skibitzke, H.E.; Chapman, H.T.; Robinson, G.M.; McCullough, Richard A.

    1961-01-01

    An experiment was conducted by the U.S. Geological Survey to determine the feasibility of using a radioactive substance as a tracer in the study of microscopic flow in a saturated porous solid. A radioactive tracer was chosen in preference to dye or other chemical in order to eliminate effects of the tracer itself on the flow system such as those relating to density, viscosity and surface tension. The porous solid was artificial "sandstone" composed of uniform fine grains of sand bonded together with an epoxy adhesive. The sides of the block thus made were sealed with an epoxy coating compound to insure water-tightness. Because of the chemical inertness of the block it was possible to use radioactive phosphorus (P32). Ion-exchange equilibrium was created between the block and nonradioactive phosphoric acid. Then a tracer tagged with P32 was injected into the block in the desired geometric configuration, in this case, a line source. After equilibrium in isotopic exchange was reached between the block and the line source, the block was rinsed, drained and sawn into slices. It was found that a quantitative analysis of the flow system may be made by assaying the dissected block. ?? 1961.

  20. Quantification of metal loading in French Gulch, Summit County, Colorado, using a tracer-injection study, July 1996. Final report

    SciTech Connect

    Kimball, B.A.; Runkel, R.L.; Gerner, L.J.

    1999-10-01

    The objective of this report is to present a description of the complex hydrology of the French Gulch site using the tracer-injection study and the synoptic sampling. In particular, the tracer injection allows for evaluation of the effect of the hydrology on the fate and transport of the metals in French Gulch.

  1. sup 14,15 N, sup 13 C, sup 57 Fe, and sup 1,2 H Q-band ENDOR study of Fe-S proteins with clusters that have endogenous sulfur ligands

    SciTech Connect

    Houseman, A.L.P.; Chaoliang Fan; Werst, M.M.; Hoffman, B.M. ); Byungha Oh; Markley, J.L. ); Kennedy, M.C.; Beinert, H. )

    1992-02-25

    The benefits of performing ENDOR experiments at higher microwave frequency are demonstrated in a Q-band (35 GHz) ENDOR investigation of a number of proteins with (nFe-mS) clusters, n = 2,3,4. Each protein displays several resonances in the frequency range of 0-20 MHz. In all instances, features are seen near {nu} {approx} 13 and 8 MHz that can be assigned, respectively, to distant ENDOR from {sup 13}C in natural-abundance (1.1%) and from {sup 14}N. In addition, a number of proteins show local {sup 13}C ENDOR signals with resolved hyperfine interactions; these are assigned to the {beta} carbons of cysteines bound to the cluster. Quadrupole coupling constants are derived for both local and distant {sup 14}N signals. The interpretation of the data is supported by studies on {sup 15}N- and {sup 13}C-enriched ferredoxin (Fd) from Anabaena 7120, where the {sup 15}N signals can be clearly correlated with the corresponding {sup 14}N signals and where the {sup 13}C signals are strongly enhanced. Thus, the observation of {sup 14}N {Delta}m{sub I} = {plus minus} 2 signals at Q-band provides a new technique for examining weak interactions with a cluster. Six proteins show an additional pattern near {nu} {approx} 18 MHz that arises from {sup 57}Fe in natural abundance (2.2%) with A({sup 57}Fe) {approx} 36 MHz, which opens the possibility of studying proteins for which enrichment is impractical. Q-band ENDOR studies also have been carried out on four {sup 2}H-exchanged Fe-S proteins, and ENDOR detects exchangeable protons in each. The importance of these findings for the interpretation of X- and Q-band ENDOR at low radiofrequencies is discussed.

  2. Experimental design for estimating parameters of rate-limited mass transfer: Analysis of stream tracer studies

    NASA Astrophysics Data System (ADS)

    Wagner, Brian J.; Harvey, Judson W.

    Tracer experiments are valuable tools for analyzing the transport characteristics of streams and their interactions with shallow groundwater. The focus of this work is the design of tracer studies in high-gradient stream systems subject to advection, dispersion, groundwater inflow, and exchange between the active channel and zones in surface or subsurface water where flow is stagnant or slow moving. We present a methodology for (1) evaluating and comparing alternative stream tracer experiment designs and (2) identifying those combinations of stream transport properties that pose limitations to parameter estimation and therefore a challenge to tracer test design. The methodology uses the concept of global parameter uncertainty analysis, which couples solute transport simulation with parameter uncertainty analysis in a Monte Carlo framework. Two general conclusions resulted from this work. First, the solute injection and sampling strategy has an important effect on the reliability of transport parameter estimates. We found that constant injection with sampling through concentration rise, plateau, and fall provided considerably more reliable parameter estimates than a pulse injection across the spectrum of transport scenarios likely encountered in high-gradient streams. Second, for a given tracer test design, the uncertainties in mass transfer and storage-zone parameter estimates are strongly dependent on the experimental Damkohler number, DaI, which is a dimensionless combination of the rates of exchange between the stream and storage zones, the stream-water velocity, and the stream reach length of the experiment. Parameter uncertainties are lowest at DaI values on the order of 1.0. When DaI values are much less than 1.0 (owing to high velocity, long exchange timescale, and/or short reach length), parameter uncertainties are high because only a small amount of tracer interacts with storage zones in the reach. For the opposite conditions (DaI>>1.0), solute exchange

  3. Using Tracer Experiments To Study Phosphorus Transfer From Soil To Overland Flow

    NASA Astrophysics Data System (ADS)

    Vollmer, T.; Stamm, C.; Schaerer, M.; Sinaj, S.; Frossard, E.; Fluehler, H.

    Diffuse phosphorus (P) losses from agricultural land contribute to the eutrophication of surface water bodies in Switzerland. Grassland soils in areas of high animal stock densities are often prone to high P losses due to over-fertilization and a strong accumu- lation of P in the topsoil. In order to understand the effects of management practices and remediation measures on P transfer into runoff water at a small scale it is impor- tant to localize the sources of this phosphorus within the soil profile and to describe the water flows within the topsoil­overland flow system. We are studying the effects of remediation measures on P availability in the soil and on P concentrations in overland flow in a field experiment. We are using tracer exper- iments to examine the mixing behavior of water applied with a sprinkling device onto the soil surface with pre-event soil water and to trace the contribution of those two water sources to overland flow. Two plots were pre-irrigated with a solution of KBr in order to label the soil solu- tion. After a few days of equilibration, two fluorescent dyes were applied to different areas of the plots at a constant rate of 40 mm h-1. Surface runoff was analyzed for tracer concentrations. Small soil monoliths (0.35 * 0.25 *0.20 m3) were excavated and the tracer distribution within the blocks was mapped using a digital camera, optical filters, and tracer specific excitation light source. This tracing technique allowed for independent mapping of the distribution of two simultaneously applied tracers. The experiments demonstrated heterogenous infiltration of the dyes, negligible lat- eral translocation of the dyes within the soil, minimal transfer of the pre-applied Br- into overland flow, early breakthrough of the dye tracers in overland flow which was independent of the tracers sorption properties and a recovery of the dyes that corre- sponded to the runoff ratio. In all, the experiments indicate a very restricted interac- tion between

  4. Nocturnal Glucose Metabolism in Type 1 Diabetes: A Study Comparing Single Versus Dual Tracer Approaches

    PubMed Central

    Mallad, Ashwini; Hinshaw, Ling; Dalla Man, Chiara; Cobelli, Claudio; Basu, Rita; Lingineni, Ravi; Carter, Rickey E.; Kudva, Yogish C.

    2015-01-01

    Abstract Background: Understanding the effect size, variability, and underlying physiology of the dawn phenomenon is important for next-generation closed-loop control algorithms for type 1 diabetes (T1D). Subjects and Methods: We used an iterative protocol design to study 16 subjects with T1D on individualized insulin pump therapy for two successive nights. Endogenous glucose production (EGP) rates at 3 a.m. and 7 a.m. were measured with [6,6-2H2]glucose as a single tracer, infused from midnight to 7 a.m. in all subjects. To explore possibility of tracer recycling due to prolonged [6,6-2H2]glucose infusion, which was highly probable after preplanned interim data analyses, we infused a second tracer, [6-3H]glucose, from 4 a.m. to 7 a.m. in the last seven subjects to measure EGP at 7 a.m. Results: Cortisol concentrations increased during both nights, but changes in glucagon and insulin concentration were inconsistent. Although the plasma glucose concentrations rose from midnight to 7 a.m. during both nights, EGP measured with [6,6-2H2]glucose between 3 a.m. and 7 a.m. did not differ during Night 1 but fell in Night 2. However, EGP measured with [6-3H]glucose at 7 a.m. was higher than that measured with [6,6-2H2]glucose during both nights, thereby suggesting tracer recycling probably underestimating EGP calculated at 7 a.m. with [6,6-2H2]glucose. Likewise, EGP was higher at 7 a.m. with [6-3H]glucose than at 3 a.m. with [6,6-2H2]glucose during both nights. Conclusions: The data demonstrate a consistent overnight rise in glucose concentrations through increased EGP, mediated likely by rising cortisol concentrations. The observations with the dual tracer approach imply significant tracer recycling leading to underestimation of EGP measured by longer-duration tracer infusion. PMID:26121060

  5. Experimental design for estimating parameters of rate-limited mass transfer: Analysis of stream tracer studies

    USGS Publications Warehouse

    Wagner, B.J.; Harvey, J.W.

    1997-01-01

    Tracer experiments are valuable tools for analyzing the transport characteristics of streams and their interactions with shallow groundwater. The focus of this work is the design of tracer studies in high-gradient stream systems subject to advection, dispersion, groundwater inflow, and exchange between the active channel and zones in surface or subsurface water where flow is stagnant or slow moving. We present a methodology for (1) evaluating and comparing alternative stream tracer experiment designs and (2) identifying those combinations of stream transport properties that pose limitations to parameter estimation and therefore a challenge to tracer test design. The methodology uses the concept of global parameter uncertainty analysis, which couples solute transport simulation with parameter uncertainty analysis in a Monte Carlo framework. Two general conclusions resulted from this work. First, the solute injection and sampling strategy has an important effect on the reliability of transport parameter estimates. We found that constant injection with sampling through concentration rise, plateau, and fall provided considerably more reliable parameter estimates than a pulse injection across the spectrum of transport scenarios likely encountered in high-gradient streams. Second, for a given tracer test design, the uncertainties in mass transfer and storage-zone parameter estimates are strongly dependent on the experimental Damkohler number, DaI, which is a dimensionless combination of the rates of exchange between the stream and storage zones, the stream-water velocity, and the stream reach length of the experiment. Parameter uncertainties are lowest at DaI values on the order of 1.0. When DaI values are much less than 1.0 (owing to high velocity, long exchange timescale, and/or short reach length), parameter uncertainties are high because only a small amount of tracer interacts with storage zones in the reach. For the opposite conditions (DaI >> 1.0), solute exchange

  6. A Study Plan for Determining Recharge Rates at the Hanford Site Using Environmental Tracers

    SciTech Connect

    Murphy, E. M.; Szecsody, J. E.; Phillips, S. J.

    1991-02-01

    This report presents a study plan tor estimating recharge at the Hanford Site using environmental tracers. Past operations at the Hanford Site have led to both soil and groundwater contamination, and recharge is one of the primary mechanisms for transporting contaminants through the vadose zone and into the groundwater. The prediction of contaminant movement or transport is one aspect of performance assessment and an important step in the remedial investigation/feasibility study (RI/FS) process. In the past, recharge has been characterized by collecting lysimeter data. Although lysimeters can generate important and reliable data, their limitations include 1) fixed location, 2) fixed sediment contents, 3) edge effects, 4) low rates, and 5) relatively short duration of measurement. These limitations impact the ability to characterize the spatial distribution of recharge at the Hanford Site, and thus the ability to predict contaminant movement in the vadose zone. An alternative to using fixed lysimeters for determining recharge rates in the vadose zone is to use environmental tracers. Tracers that have been used to study water movement in the vadose zone include total chloride, {sup 36}CI, {sup 3}H, and {sup 2}H/{sup 18}O. Atmospheric levels of {sup 36}CI and {sup 3}H increased during nuclear bomb testing in the Pacific, and the resulting "bomb pulse" or peak concentration can be measured in the soil profile. Locally, past operations at the Hanford Site have resu~ed in the atmospheric release of numerous chemical and isotopic tracers, including nitrate, {sup 129}I, and {sup 99}Tc. The radionuclides, in particular, reached a well-defined atmospheric peak in 1945. Atmospheric releases of {sup 129}I and {sup 99}Tc were greatly reduced by mid-1946, but nitrogen oxides continued to be released from the uranium separations facilities. As a result, the nitrate concentrations probably peaked in the mid-1950s, when the greatest number of separations facilities were operating

  7. Characterization of crushed tuff for the evaluation of the fate of tracers in transport studies in the unsaturated zone

    SciTech Connect

    Polzer, W.L.; Fuentes, H.R.; Raymond, R.; Bish, D.L.; Gladney, E.S.; Lopez, E.A.

    1987-03-01

    Results of field-scale (caisson) transport studies under unsaturated moisture and steady and nonsteady flow conditions indicate variability and a lack of conservation of mass in solute transport. The tuff materials used in that study were analyzed for the presence of tracers and of freshly precipitated material to help explain the variability and lack of conservation of mass. Selected tuff samples were characterized by neutron activation analysis for tracer identification, by x-ray diffraction for mineral identification, by petrographic analysis for identification of freshly precipitated material, and by x-ray fluorescence analysis for identification of major and trace elements. The results of these analyses indicate no obvious presence of freshly precipitated material that would retard tracer movement. The presence of the nonsorbing tracers (bromide and iodide) suggest the retention of these tracers in immobile water. The presence of the nonsorbing tracers (bromide and iodide) suggest the retention of these tracers in immobile water. The presence of sorbing and nonsorbing tracers on the tuff at some locations (even cesium at the 415-cm depth) and not at others suggests variability in transport. 15 refs., 14 figs., 9 tabs.

  8. NMR studies of active-site properties of human carbonic anhydrase II by using (15) N-labeled 4-methylimidazole as a local probe and histidine hydrogen-bond correlations.

    PubMed

    Shenderovich, Ilya G; Lesnichin, Stepan B; Tu, Chingkuang; Silverman, David N; Tolstoy, Peter M; Denisov, Gleb S; Limbach, Hans-Heinrich

    2015-02-01

    By using a combination of liquid and solid-state NMR spectroscopy, (15) N-labeled 4-methylimidazole (4-MI) as a local probe of the environment has been studied: 1) in the polar, wet Freon CDF3 /CDF2 Cl down to 130 K, 2) in water at pH 12, and 3) in solid samples of the mutant H64A of human carbonic anhydrase II (HCA II). In the latter, the active-site His64 residue is replaced by alanine; the catalytic activity is, however, rescued by the presence of 4-MI. For the Freon solution, it is demonstrated that addition of water molecules not only catalyzes proton tautomerism but also lifts its quasidegeneracy. The possible hydrogen-bond clusters formed and the mechanism of the tautomerism are discussed. Information about the imidazole hydrogen-bond geometries is obtained by establishing a correlation between published (1) H and (15) N chemical shifts of the imidazole rings of histidines in proteins. This correlation is useful to distinguish histidines embedded in the interior of proteins and those at the surface, embedded in water. Moreover, evidence is obtained that the hydrogen-bond geometries of His64 in the active site of HCA II and of 4-MI in H64A HCA II are similar. Finally, the degeneracy of the rapid tautomerism of the neutral imidazole ring His64 reported by Shimahara et al. (J. Biol. Chem.- 2007, 282, 9646) can be explained with a wet, polar, nonaqueous active-site conformation in the inward conformation, similar to the properties of 4-MI in the Freon solution. The biological implications for the enzyme mechanism are discussed. PMID:25521423

  9. NMR studies of active-site properties of human carbonic anhydrase II by using (15) N-labeled 4-methylimidazole as a local probe and histidine hydrogen-bond correlations.

    PubMed

    Shenderovich, Ilya G; Lesnichin, Stepan B; Tu, Chingkuang; Silverman, David N; Tolstoy, Peter M; Denisov, Gleb S; Limbach, Hans-Heinrich

    2015-02-01

    By using a combination of liquid and solid-state NMR spectroscopy, (15) N-labeled 4-methylimidazole (4-MI) as a local probe of the environment has been studied: 1) in the polar, wet Freon CDF3 /CDF2 Cl down to 130 K, 2) in water at pH 12, and 3) in solid samples of the mutant H64A of human carbonic anhydrase II (HCA II). In the latter, the active-site His64 residue is replaced by alanine; the catalytic activity is, however, rescued by the presence of 4-MI. For the Freon solution, it is demonstrated that addition of water molecules not only catalyzes proton tautomerism but also lifts its quasidegeneracy. The possible hydrogen-bond clusters formed and the mechanism of the tautomerism are discussed. Information about the imidazole hydrogen-bond geometries is obtained by establishing a correlation between published (1) H and (15) N chemical shifts of the imidazole rings of histidines in proteins. This correlation is useful to distinguish histidines embedded in the interior of proteins and those at the surface, embedded in water. Moreover, evidence is obtained that the hydrogen-bond geometries of His64 in the active site of HCA II and of 4-MI in H64A HCA II are similar. Finally, the degeneracy of the rapid tautomerism of the neutral imidazole ring His64 reported by Shimahara et al. (J. Biol. Chem.- 2007, 282, 9646) can be explained with a wet, polar, nonaqueous active-site conformation in the inward conformation, similar to the properties of 4-MI in the Freon solution. The biological implications for the enzyme mechanism are discussed.

  10. National Biomedical Tracer Facility (NBTF). Project definition study: Phase I

    SciTech Connect

    Lagunas-Solar, M.C.

    1995-02-15

    This report describes a five-year plan for the construction and commissioning of a reliable and versatile NBTF facility for the production of high-quality, high-yield radioisotopes for research, biomedical, and industrial applications. The report is organized in nine sections providing, in consecutive order, responses to the nine questions posed by the U.S. Department of Energy in its solicitation for the NBTF Project Definition Study. In order to preserve direct correspondence (e.g., Sec. 3 = 3rd item), this Introduction is numbered {open_quotes}0.{close_quotes} Accelerator and facility designs are covered in Section 1 (Accelerator Design) and Section 2 (Facility Design). Preliminary estimates of capital costs are detailed in Section 3 (Design and Construction Costs). Full licensing requirements, including federal, state, and local ordinances, are discussed in Section 4 (Permits). A plan for the management of hazardous materials to be generated by NBTF is presented in Section 5 (Waste Management). An evaluation of NBTF`s economic viability and its potential market impact is detailed in Section 6(Business Plan), and is complemented by the plans in Section 7 (Operating Plan) and Section 8 (Radioisotope Plan). Finally, a plan for NBTF`s research, education, and outreach programs is presented in Section 9 (Research and Education Programs).

  11. Results of a tracer study for the validation study: The Terrain-Responsive Atmospheric Code (TRAC): Volume 2

    SciTech Connect

    Not Available

    1988-09-01

    This report describes a tracer study conducted by North American Weather Consultants (NAWC) at the Rocky Flats Plant in Colorado. The purpose of the study was to provide data for the evaluation of a dispersion model. This tracer study was timed to sample the upslope, downslope and transition conditions prevalent in the Rocky Flats area during the summer period. The field studies were conducted from 17 July, 1987 through 8 August, 1987. A total of twelve days of plume tracking were conducted, four during upslope conditions, six during stable downslope conditions, and two during transition conditions. The tracer gas, sulfur hexafluoride (SF/sub 6/) was released on the Rocky Flats plant site and the plume was tracked using an aircraft with a continuous SF/sub 6/ analyzer on-board. Grab samples were also obtained from various sites on the ground during the aerial tracking period. Volume 2 contains data sheets only.

  12. A tracer study in an Alaskan gravel beach and its implications on the persistence of the Exxon Valdez oil.

    PubMed

    Li, Hailong; Boufadel, Michel C

    2011-06-01

    Despite great efforts including bioremediation, the 1989 Exxon Valdez oil spills persist in many gravel beaches in Prince William Sound, Alaska, USA. To explore this mystery, a lithium tracer study was conducted along two transects on one of these beaches. The tracer injections and transports were successfully simulated using the 2-dimensional numerical model MARUN. The tracer stayed much longer in the oil-persisting, right transect (facing landwand) than in the clean, left transect. If the tracer is approximately regarded as oils, oils in the upper layer would have more opportunities to enter the lower layer in the right transect than in the left one. This may qualitatively explain the oil persistence within the right transect. When the tracer is regarded as nutrients, the long stay of nutrients within the right transect implies that the oil persistence along the right transect was not due to the lack of nutrients during the bioremediation. PMID:21492883

  13. Solute movement in drained fen peat: a field tracer study in a Somerset (UK) wetland

    NASA Astrophysics Data System (ADS)

    Baird, Andrew J.; Gaffney, Simon W.

    2000-10-01

    Little is known about solute transport in peats, despite the obvious importance of solute transport on eco-hydrological processes in both managed and natural peatlands. To address this lack of knowledge, we investigated solute transport processes in an agricultural fen peat using a conservative KBr tracer. The main aim of the study was to elucidate solute transport behaviour in general in this peat, with a more specific aim of investigating whether preferential or bypassing flow occurred. The tracer moved through the peat more rapidly than expected, and the pattern of movement showed clear evidence of plot-scale bypassing flow. The data also provide evidence that bypassing flow occurs in pores at smaller scales. The implications of this study for management of wetland pastures in the Somerset Moors in south-west England are discussed.

  14. Field studies of streamflow generation using natural and injected tracers on Bickford and Walker Branch Watersheds

    SciTech Connect

    Genereux, D.; Hemond, H.; Mulholland, P.

    1992-05-01

    Field studies of streamflow generation were undertaken on two forested watersheds, the West Road subcatchment of Bickford Watershed in central Massachusetts and the West Fork of Walker Branch Watershed in eastern Tennessee. A major component of the research was development of a two-stage methodology for the use of naturally-occurring {sup 222}Rn as a tracer. The first of the two stages was solving a mass-balance equation for {sup 222}Rn around a stream reach of interest in order to calculate Rn{sub q}, the {sup 222}Rn content of the lateral inflow to the reach; a conservative tracer (chloride) and a volatile tracer (propane) were injected into the study stream to account for lateral inflow to, and volatilization from, the study reach. The second stage involved quantitative comparison of Rn{sub q} to the measured {sup 222}Rn concentrations of different subsurface waters in order to assess how important these waters were in contributing lateral inflow to the stream reach.

  15. Flow optimization study of a batch microfluidics PET tracer synthesizing device

    PubMed Central

    Elizarov, Arkadij M.; Meinhart, Carl; van Dam, R. Michael; Huang, Jiang; Daridon, Antoine; Heath, James R.; Kolb, Hartmuth C.

    2010-01-01

    We present numerical modeling and experimental studies of flow optimization inside a batch microfluidic micro-reactor used for synthesis of human-scale doses of Positron Emission Tomography (PET) tracers. Novel techniques are used for mixing within, and eluting liquid out of, the coin-shaped reaction chamber. Numerical solutions of the general incompressible Navier Stokes equations along with time-dependent elution scalar field equation for the three dimensional coin-shaped geometry were obtained and validated using fluorescence imaging analysis techniques. Utilizing the approach presented in this work, we were able to identify optimized geometrical and operational conditions for the micro-reactor in the absence of radioactive material commonly used in PET related tracer production platforms as well as evaluate the designed and fabricated micro-reactor using numerical and experimental validations. PMID:21072595

  16. STRATEGIES FOR QUANTIFYING PET IMAGING DATA FROM TRACER STUDIES OF BRAIN RECEPTORS AND ENZYMES.

    SciTech Connect

    Logan, J.

    2001-04-02

    A description of some of the methods used in neuroreceptor imaging to distinguish changes in receptor availability has been presented in this chapter. It is necessary to look beyond regional uptake of the tracer since uptake generally is affected by factors other than the number of receptors for which the tracer has affinity. An exception is the infusion method producing an equilibrium state. The techniques vary in complexity some requiring arterial blood measurements of unmetabolized tracer and multiple time uptake data. Others require only a few plasma and uptake measurements and those based on a reference region require no plasma measurements. We have outlined some of the limitations of the different methods. Laruelle (1999) has pointed out that test/retest studies to which various methods can be applied are crucial in determining the optimal method for a particular study. The choice of method will also depend upon the application. In a clinical setting, methods not involving arterial blood sampling are generally preferred. In the future techniques for externally measuring arterial plasma radioactivity with only a few blood samples for metabolite correction will extend the modeling options of clinical PET. Also since parametric images can provide information beyond that of ROI analysis, improved techniques for generating such images will be important, particularly for ligands requiring more than a one-compartment model. Techniques such as the wavelet transform proposed by Turkheimer et al. (2000) may prove to be important in reducing noise and improving quantitation.

  17. Vertical Tracer Concentration Profiles Measured During the Joint Urban 2003 Dispersion Study

    SciTech Connect

    Flaherty, Julia E.; Lamb, Brian K.; Allwine, K Jerry; Allwine, Eugene J.

    2007-12-01

    An atmospheric tracer dispersion study known as Joint Urban 2003 was conducted in Oklahoma City, Oklahoma during the summer of 2003. As part of this field program, vertical concentration profiles were measured at approximately 1 km from downtown tracer gas release locations. These profiles indicated that the urban landscape was very effective in mixing the plume vertically. The height of the plume centerline (as determined by the maximum concentration over the depth of the measurements) for any specific 30 min period varied over the 65 m measurement range. Most of the variations in tracer concentration observed in the profile time series were related to changes in wind direction as opposed to changes in turbulence. As a simple analysis tool for emergency response, maximum normalized concentration curves were developed with 5-minute averaged measurements. These curves give the maximum concentration (normalized by the release rate) that would be observed as a function of downwind distance in an urban area. The 5-min data resulted in greater concentrations than predicted with a simple Gaussian plume model. However, the curve compared well with results from a computational fluid dynamics simulation. This dispersion dataset is a valuable asset not only for refining air quality models, but also for developing new tools for emergency response personnel in the event of a toxic release.

  18. Through-space (19) F-(15) N couplings for the assignment of stereochemistry in flubenzimine.

    PubMed

    Ghiviriga, Ion; Rubinski, Miles A; Dolbier, William R

    2016-07-01

    Through-space (19) F-(15) N couplings revealed the configuration of flubenzimine, with the CF3 group on N4 pointing towards the lone pair of N5. The (19) F-(15) N coupling constants were measured at natural abundance using a spin-state selective indirect-detection pulse sequence. As (15) N-labelled proteins are routinely synthesized for NMR studies, through-space (19) F-(15) N couplings have the potential to probe the stereochemistry of these proteins by (19) F labelling of some amino acids or can reveal the site of docking of fluorine-containing drugs. Copyright © 2016 John Wiley & Sons, Ltd.

  19. Overview of SIMS-Based Experimental Studies of Tracer Diffusion in Solids and Application to Mg Self-Diffusion

    DOE PAGES

    Kulkarni, Nagraj S.; Bruce Warmack, Robert J.; Radhakrishnan, Bala; Hunter, Jerry L.; Sohn, Yongho; Coffey, Kevin R.; Murch, Graeme E.; Belova, Irina V.

    2014-09-23

    Tracer diffusivities provide the most fundamental information on diffusion in materials and are the foundation of robust diffusion databases. Compared to traditional radiotracer techniques that utilize radioactive isotopes, the secondary ion mass spectrometry (SIMS) based thin-film technique for tracer diffusion is based on the use of enriched stable isotopes that can be accurately profiled using SIMS. Experimental procedures & techniques that are utilized for the measurement of tracer diffusion coefficients are presented for pure magnesium, which presents some unique challenges due to the ease of oxidation. The development of a modified Shewmon-Rhines diffusion capsule for annealing Mg and an ultra-highmore » vacuum (UHV) system for sputter deposition of Mg isotopes are discussed. Optimized conditions for accurate SIMS depth profiling in polycrystalline Mg are provided. An automated procedure for the correction of heat-up and cool-down times during tracer diffusion annealing is discussed. The non-linear fitting of a SIMS depth profile data using the thin film Gaussian solution to obtain the tracer diffusivity along with the background tracer concentration and tracer film thickness is discussed. An Arrhenius fit of the Mg self-diffusion data obtained using the low-temperature SIMS measurements from this study and the high-temperature radiotracer measurements of Shewmon and Rhines (1954) was found to be a good representation of both types of diffusion data that cover a broad range of temperatures between 250 - 627° C (523 900 K).« less

  20. Overview of SIMS-Based Experimental Studies of Tracer Diffusion in Solids and Application to Mg Self-Diffusion

    SciTech Connect

    Kulkarni, Nagraj S.; Bruce Warmack, Robert J.; Radhakrishnan, Bala; Hunter, Jerry L.; Sohn, Yongho; Coffey, Kevin R.; Murch, Graeme E.; Belova, Irina V.

    2014-09-23

    Tracer diffusivities provide the most fundamental information on diffusion in materials and are the foundation of robust diffusion databases. Compared to traditional radiotracer techniques that utilize radioactive isotopes, the secondary ion mass spectrometry (SIMS) based thin-film technique for tracer diffusion is based on the use of enriched stable isotopes that can be accurately profiled using SIMS. Experimental procedures & techniques that are utilized for the measurement of tracer diffusion coefficients are presented for pure magnesium, which presents some unique challenges due to the ease of oxidation. The development of a modified Shewmon-Rhines diffusion capsule for annealing Mg and an ultra-high vacuum (UHV) system for sputter deposition of Mg isotopes are discussed. Optimized conditions for accurate SIMS depth profiling in polycrystalline Mg are provided. An automated procedure for the correction of heat-up and cool-down times during tracer diffusion annealing is discussed. The non-linear fitting of a SIMS depth profile data using the thin film Gaussian solution to obtain the tracer diffusivity along with the background tracer concentration and tracer film thickness is discussed. An Arrhenius fit of the Mg self-diffusion data obtained using the low-temperature SIMS measurements from this study and the high-temperature radiotracer measurements of Shewmon and Rhines (1954) was found to be a good representation of both types of diffusion data that cover a broad range of temperatures between 250 - 627° C (523 900 K).

  1. Dynamics of 4-oxo-TEMPO-d16-15N nitroxide-propylene glycol system studied by ESR and ESE in liquid and glassy state in temperature range 10-295 K

    NASA Astrophysics Data System (ADS)

    Goslar, Janina; Hoffmann, Stanislaw K.; Lijewski, Stefan

    2016-08-01

    ESR spectra and electron spin relaxation of nitroxide radical in 4-oxo-TEMPO-d16-15N in propylene glycol were studied at X-band in the temperature range 10-295 K. The spin-lattice relaxation in the liquid viscous state determined from the resonance line shape is governed by three mechanisms occurring during isotropic molecular reorientations. In the glassy state below 200 K the spin-lattice relaxation, phase relaxation and electron spin echo envelope modulations (ESEEM) were studied by pulse spin echo technique using 2-pulse and 3-pulse induced signals. Electron spin-lattice relaxation is governed by a single non-phonon relaxation process produced by localized oscillators of energy 76 cm-1. Electron spin dephasing is dominated by a molecular motion producing a resonance-type peak in the temperature dependence of the dephasing rate around 120 K. The origin of the peak is discussed and a simple method for the peak shape analysis is proposed, which gives the activation energy of a thermally activated motion Ea = 7.8 kJ/mol and correlation time τ0 = 10-8 s. The spin echo amplitude is strongly modulated and FT spectrum contains a doublet of lines centered around the 2D nuclei Zeeman frequency. The splitting into the doublet is discussed as due to a weak hyperfine coupling of nitroxide unpaired electron with deuterium of reorienting CD3 groups.

  2. Nitrogen retention across a gradient of 15N additions to an unpolluted temperate forest soil in Chile

    USGS Publications Warehouse

    Perakis, Steven S.; Compton, J.E.; Hedin, L.O.

    2005-01-01

    Accelerated nitrogen (N) inputs can drive nonlinear changes in N cycling, retention, and loss in forest ecosystems. Nitrogen processing in soils is critical to understanding these changes, since soils typically are the largest N sink in forests. To elucidate soil mechanisms that underlie shifts in N cycling across a wide gradient of N supply, we added 15NH415NO3 at nine treatment levels ranging in geometric sequence from 0.2 kg to 640 kg NA? ha-1A? yr-1 to an unpolluted old-growth temperate forest in southern Chile. We recovered roughly half of tracers in 0-25 cm of soil, primarily in the surface 10 cm. Low to moderate rates of N supply failed to stimulate N leaching, which suggests that most unrecovered 15N was transferred from soils to unmeasured sinks above ground. However, soil solution losses of nitrate increased sharply at inputs > 160 kg NA? ha-1A? yr-1, corresponding to a threshold of elevated soil N availability and declining 15N retention in soil. Soil organic matter (15N in soils at the highest N inputs and may explain a substantial fraction of the 'missing N' often reported in studies of fates of N inputs to forests. Contrary to expectations, N additions did not stimulate gross N cycling, potential nitrification, or ammonium oxidizer populations. Our results indicate that the nonlinearity in N retention and loss resulted directly from excessive N supply relative to sinks, independent of plant-soil-microbial feedbacks. However, N additions did induce a sharp decrease in microbial biomass C:N that is predicted by N saturation theory, and which could increase long-term N storage in soil organic matter by lowering the critical C:N ratio for net N mineralization. All measured sinks accumulated 15N tracers across the full gradient of N supply, suggesting that short-term nonlinearity in N retention resulted from saturation of uptake kinetics, not uptake capacity, in plant, soil, and microbial pools.

  3. Isotopic analysis and multi tracer tests to study groundwater circulation in a landslide in Southern Alps

    NASA Astrophysics Data System (ADS)

    Pera, Sebastian; Marzocchi, Roberto; Bronzini, Simona

    2014-05-01

    Understanding groundwater circulation in landslides is often necessary to assess their dynamics and forecast movements. Fontana landslide is placed in Canton Ticino, its main body is constituted by gneiss, that is covered by moraine and other deposits related to the mass movements like debris flows and, rock fall. Gneiss that originally has low hydraulic conductivity increases their aquifer properties due to weathering and fracture presence. In fact several springs are present in across the landslide some of them having discharge up to 1 m3 S-1. To study groundwater circulation in the landslide body, a multi tracer test was designed and water samples taken. 3 tracers (Naphtionate, Sulphorhodamine B and Uranine) were injected underground. Injection mass was calculated by using EHTD (EPA, 2003), 2 field fluorimeters were placed in springs considered to be the main water discharge of the system for continuous monitoring. Other springs with smaller discharge scattered along the landslide body were monitored by using charcoal bags. Water samples also were taken for chemical and stable isotopes analysis. The tracers' presence was also monitored in the river crossing the area collecting surface flow from snowmelt and springs. Even if the landslide has a small area, isotopic composition of water from springs shows clear differences. All samples plot close to the local meteoric water line, and an altitude effect is visible. Chemical composition is relatively uniform however some differences can also be seen. Concerning tracers the only that arrived at monitored points was uranine, and it was detected in the charcoal bags. Considering tracer concentration in ppm, in the charcoal and travel times to restitution points was possible to have conceptual model for groundwater flow across the landslide. Circulation is rapid and recharge controlled by snowmelt in spring and precipitation in late spring to autumn. Snow accumulates at the top of the landslide where an elongated

  4. Neonatal Respiratory Diseases in the Newborn Infant: Novel Insights from Stable Isotope Tracer Studies.

    PubMed

    Carnielli, Virgilio P; Giorgetti, Chiara; Simonato, Manuela; Vedovelli, Luca; Cogo, Paola

    2016-01-01

    Respiratory distress syndrome is a common problem in preterm infants and the etiology is multifactorial. Lung underdevelopment, lung hypoplasia, abnormal lung water metabolism, inflammation, and pulmonary surfactant deficiency or disfunction play a variable role in the pathogenesis of respiratory distress syndrome. High-quality exogenous surfactant replacement studies and studies on surfactant metabolism are available; however, the contribution of surfactant deficiency, alteration or dysfunction in selected neonatal lung conditions is not fully understood. In this article, we describe a series of studies made by applying stable isotope tracers to the study of surfactant metabolism and lung water. In a first set of studies, which we call 'endogenous studies', using stable isotope-labelled intravenous surfactant precursors, we showed the feasibility of measuring surfactant synthesis and kinetics in infants using several metabolic precursors including plasma glucose, plasma fatty acids and body water. In a second set of studies, named 'exogenous studies', using stable isotope-labelled phosphatidylcholine tracer given endotracheally, we could estimate surfactant disaturated phosphatidylcholine pool size and half-life. Very recent studies are focusing on lung water and on the endogenous biosynthesis of the surfactant-specific proteins. Information obtained from these studies in infants will help to better tailor exogenous surfactant treatment in neonatal lung diseases.

  5. Neonatal Respiratory Diseases in the Newborn Infant: Novel Insights from Stable Isotope Tracer Studies.

    PubMed

    Carnielli, Virgilio P; Giorgetti, Chiara; Simonato, Manuela; Vedovelli, Luca; Cogo, Paola

    2016-01-01

    Respiratory distress syndrome is a common problem in preterm infants and the etiology is multifactorial. Lung underdevelopment, lung hypoplasia, abnormal lung water metabolism, inflammation, and pulmonary surfactant deficiency or disfunction play a variable role in the pathogenesis of respiratory distress syndrome. High-quality exogenous surfactant replacement studies and studies on surfactant metabolism are available; however, the contribution of surfactant deficiency, alteration or dysfunction in selected neonatal lung conditions is not fully understood. In this article, we describe a series of studies made by applying stable isotope tracers to the study of surfactant metabolism and lung water. In a first set of studies, which we call 'endogenous studies', using stable isotope-labelled intravenous surfactant precursors, we showed the feasibility of measuring surfactant synthesis and kinetics in infants using several metabolic precursors including plasma glucose, plasma fatty acids and body water. In a second set of studies, named 'exogenous studies', using stable isotope-labelled phosphatidylcholine tracer given endotracheally, we could estimate surfactant disaturated phosphatidylcholine pool size and half-life. Very recent studies are focusing on lung water and on the endogenous biosynthesis of the surfactant-specific proteins. Information obtained from these studies in infants will help to better tailor exogenous surfactant treatment in neonatal lung diseases. PMID:27251153

  6. Tracking atmospheric sulphur pollution from the study of Racomitrium lanuginosum mosses in Iceland: A multi-isotope approach (δ34S, 206Pb/204Pb, δ13C and δ15N)

    NASA Astrophysics Data System (ADS)

    Proust, E.; Widory, D.; Gautason, B.; Rogers, K.; Morrison, J.

    2010-12-01

    Among terrestrial plants, the applicability of mosses as monitoring organisms of atmospheric pollutants is a world-wide accepted technique due to their special biological and morphologic characteristics as nonvascular plants. They are commonly regarded as the best bioindicators of air quality because they can accumulate sulphur (S) and other elements to a far greater level than is necessary for their physiological needs. This study aims at using different isotope systematics δ34S, 206Pb/204Pb, δ13C and δ15N) to help understand the origin of S in the atmophsere of Reykjavik and its vicinity, and especially the potential contribution of surrounding geothermal plants. The selected Icelandic woolly fringe moss (Racomitrium lanuginosum (Hedw.) Brid.) is extremely common in lava fields and gravely and stony areas. Samples were taken in four distinct sampling sites around the city of Reykjavik: Bláfjöll area (south-eastern suburb of the city), and close to three power plants: Hellisheioarvirkjun (northern suburb of the city), Svartsengi (south-western suburb of the city) and Nesjavellir (north-eastern suburb of the city). Results show that, whatever the sampling context is, S is controlled by a binary mixing, between i) a high δ34S (around 16‰) end-member, characteristic of mosses from Hellisheioarvirkjun, and ii) a low δ34S (around -2‰) end-member, characteristic of mosses from Nesjavellir. The multi-isotope approach, confirms this binary relation and helps to constrain the different end-members involved.

  7. Sewage derive [sup 15]N in the Baltic traced in fucus

    SciTech Connect

    Hobbie, J.E.; Fry, B. ); Larsson, U.; Elmgren, R. )

    1990-01-09

    Himmerfjarden, a fjord-like bay on the eastern shore of the Baltic, receives treated sewage from 250,000 inhabitants. Because the inorganic N in the effluent is enriched in [sup 15]N through denitrification, nitrification, and ammonia volatilization, an analysis of the distribution of [sup 15]N in the Bay tells how far from the source the sewage nitrogen moves. The attached macroalga Fucus vesiculosus was collected in early May from rocky shore at 0-0.5 m depth and the [sup 15]N content of the tips of the fronds analyzed. This N represents uptake and storage during the previous six months and growth during March and April. The [delta][sup 15]N was uniformly high (11-13[per thousand]) in the main body of the Bay within 15 km from the sewage source. Beyond 15 km values decreased with distance to a low of 4.6[per thousand] at 35 km, where the Bay ends and the coastal waters begin. Using the 11-13 and 4.6[per thousand] as endmembers, the percentage of sewage N making up the Fucus at any point may be calculated. The [delta][sub 15]N of particulate organic matter in the offshore Baltic waters was around 0[per thousand] and Fucus had an [delta][sup 15]N about 1.5[per thousand] higher than the POM. From this and other evidence we conclude that there is a belt of coastal water with an elevated [delta][sup 15]N lying along the east coast of the Baltic. This presumably derives from sewage and perhaps from agriculture and is potentially of use as a tracer of coastal zone/pelagic zone interactions.

  8. Coupling a Knudsen reactor with the short lived radioactive tracer (13)N for atmospheric chemistry studies.

    PubMed

    Schreiber, S; Kerbrat, M; Huthwelker, T; Birrer, M; Ammann, M

    2013-03-01

    A Knudsen cell flow reactor was coupled to an online gas phase source of the short-lived radioactive tracer (13)N to study the adsorption of nitrogen oxides on ice at temperatures relevant for the upper troposphere. This novel approach has several benefits over the conventional coupling of a Knudsen cell with a mass spectrometer. Experiments at lower partial pressures close to atmospheric conditions are possible. The uptake to the substrate is a direct observable of the experiment. Operation of the experiment in continuous or pulse mode allows to retrieve steady state uptake kinetics and more details of adsorption and desorption kinetics.

  9. Tracer study of oxygen and hydrogen uptake by Mg alloys in air with water vapor

    DOE PAGES

    Brady, M. P.; Fayek, M.; Meyer, H. M.; Leonard, D. N.; Elsentriecy, H. H.; Unocic, K. A.; Anovitz, L. M.; Cakmak, E.; Keiser, J. R.; Song, G. L.; et al

    2015-05-15

    We studied the pure oxidation of Mg, Mg–3Al–1Zn (AZ31B), and Mg–1Zn–0.25Zr–<0.5Nd (ZE10A) at 85 °C in humid air using sequential exposures with H218O and D216O for water vapor. Incorporation of 18O in the hydroxide/oxide films indicated that oxygen from water vapor participated in the reaction. Moreover, penetration of hydrogen into the underlying metal was observed, particularly for the Zr- and Nd-containing ZE10A. Isotopic tracer profiles suggested a complex mixed inward/outward film growth mechanism.

  10. Field Studies of Streamflow Generation Using Natural and Injected Tracers on Bickford and Walker Branch Watersheds

    SciTech Connect

    Genereux, D.

    1992-01-01

    Field studies of streamflow generation were undertaken on two forested watersheds, the West Road subcatchment of Bickford Watershed in central Massachusetts and the West Fork of Walker Branch Watershed in eastern Tennessee. A major component of the research was development of a two-stage methodology for the use of naturally-occurring {sup 222}Rn as a tracer. The first of the two stages was solving a mass-balance equation for {sup 222}Rn around a stream reach of interest in order to calculate [Rn]{sub q}, the {sup 222}Rn content of the lateral inflow to the reach; a conservative tracer (chloride) and a volatile tracer (propane) were injected into the study stream to account for lateral inflow to, and {sup 222}Rn volatilization from, the study reach. The second stage involved quantitative comparison of [Rn]{sub q} to the measured {sup 222}Rn concentrations of different subsurface waters in order to assess how important these waters were in contributing lateral inflow to the stream reach. The method was first applied to a 34 m stream reach at Bickford during baseflow; results suggested that {ge} 70% of the lateral inflow could be considered vadose zone water (water which had been in a saturated zone for less than a few days), and the remainder ''soil groundwater'' or ''saturated zone water'' (which had a longer residence time in a soil saturated zone). The method was then applied to two stream reaches on the West Fork of Walker Branch over a wide range of flow conditions; four springs were also investigated. It was found that springwater and inflow to the stream could be viewed as a mixture of water from three end members: the two defined at Bickford (vadose zone water and soil groundwater) and a third (bedrock groundwater) to account for the movement of water through fractured dolomite bedrock. Calcium was used as a second naturally-occurring tracer to distinguish bedrock groundwater from the other two end members. The behavior indicated by the three

  11. Studies of nitrogen metabolism using /sup 13/C NMR spectroscopy. 3. Synthesis of DL-(3-/sup 13/C,2-/sup 15/N)Lysine and its incorporation into streptothricin F/sup 1/

    SciTech Connect

    Gould, S.J.; Thiruvengadam, T.K.

    1981-11-04

    A scheme for the synthesis of DL-(3-/sup 13/C, 2-/sup 15/N)Lysine, I, is presented. Data are also reported to show that the mutase reaction occurring in the biosynthesis of I occurs with an intramolecular migration of nitrogen from C-2 to C-3. (BLM)

  12. N-loss isotope effects in the Peru oxygen minimum zone studied using a mesoscale eddy as a natural tracer experiment

    NASA Astrophysics Data System (ADS)

    Bourbonnais, Annie; Altabet, Mark A.; Charoenpong, Chawalit N.; Larkum, Jennifer; Hu, Haibei; Bange, Hermann W.; Stramma, Lothar

    2015-06-01

    Mesoscale eddies in Oxygen Minimum Zones (OMZs) have been identified as important fixed nitrogen (N) loss hotspots that may significantly impact both the global rate of N-loss as well as the ocean's N isotope budget. They also represent "natural tracer experiments" with intensified biogeochemical signals that can be exploited to understand the large-scale processes that control N-loss and associated isotope effects (ɛ; the ‰ deviation from 1 in the ratio of reaction rate constants for the light versus heavy isotopologues). We observed large ranges in the concentrations and N and O isotopic compositions of nitrate (NO3-), nitrite (NO2-), and biogenic N2 associated with an anticyclonic mode-water eddy in the Peru OMZ during two cruises in November and December 2012. In the eddy's center where NO3- was nearly exhausted, we measured the highest δ15N values for both NO3- and NO2- (up to ~70‰ and 50‰) ever reported for an OMZ. Correspondingly, N deficit and biogenic N2-N concentrations were also the highest near the eddy's center (up to ~40 µmol L-1). δ15N-N2 also varied with biogenic N2 production, following kinetic isotopic fractionation during NO2- reduction to N2 and, for the first time, provided an independent assessment of N isotope fractionation during OMZ N-loss. We found apparent variable ɛ for NO3- reduction (up to ~30‰ in the presence of NO2-). However, the overall ɛ for N-loss was calculated to be only ~13-14‰ (as compared to canonical values of ~20-30‰) assuming a closed system and only slightly higher assuming an open system (16-19‰). Our results were similar whether calculated from the disappearance of DIN (NO3- + NO2-) or from the appearance of N2 and changes in isotopic composition. Further, we calculated the separate ɛ values for NO3- reduction to NO2- and NO2- reduction to N2 of ~16-21‰ and ~12‰, respectively, when the effect of NO2- oxidation could be removed. These results, together with the relationship between N and O of NO

  13. Influence of N-H...O and O-H...O hydrogen bonds on the (17)O, (15)N and (13)C chemical shielding tensors in crystalline acetaminophen: a density functional theory study.

    PubMed

    Esrafili, Mehdi D; Behzadi, Hadi; Hadipour, Nasser L

    2007-06-01

    A computational investigation was carried out to characterize the (17)O, (15)N and (13)C chemical shielding tensors in crystalline acetaminophen. We found that N-H...O and O-H...O hydrogen bonds around the acetaminophen molecule in the crystal lattice have different influences on the calculated (17)O, (15)N and (13)C chemical shielding eigenvalues and their orientations in the molecular frame of axes. The calculations were performed with the B3LYP method and 6-311++G(d, p) and 6-311+G(d) standard basis sets using the Gaussian 98 suite of programs. Calculated chemical shielding tensors were used to evaluate the (17)O, (15)N, and (13)C NMR chemical shift tensors in crystalline acetaminophen, which are in reasonable agreement with available experimental data. The difference between the calculated NMR parameters of the monomer and molecular clusters shows how much hydrogen-bonding interactions affect the chemical shielding tensors of each nucleus. The computed (17)O chemical shielding tensor on O(1), which is involved in two intermolecular hydrogen bonds, shows remarkable sensitivity toward the choice of the cluster model, whereas the (17)O chemical shielding tensor on O(2) involved in one N-H...O hydrogen bond, shows smaller improvement toward the hydrogen-bonding interactions. Also, a reasonably good agreement between the experimentally obtained solid-state (15)N and (13)C NMR chemical shifts and B3LYP/6-311++G(d, p) calculations is achievable only in molecular cluster model where a complete hydrogen-bonding network is considered. Moreover, at the B3LYP/6-311++G(d, p) level of theory, the calculated (17)O, (15)N and (13)C chemical shielding tensor orientations are able to reproduce the experimental values to a reasonably good degree of accuracy.

  14. Human dietary δ(15)N intake: representative data for principle food items.

    PubMed

    Huelsemann, F; Koehler, K; Braun, H; Schaenzer, W; Flenker, U

    2013-09-01

    Dietary analysis using δ(15)N values of human remains such as bone and hair is usually based on general principles and limited data sets. Even for modern humans, the direct ascertainment of dietary δ(15)N is difficult and laborious, due to the complexity of metabolism and nitrogen fractionation, differing dietary habits and variation of δ(15)N values of food items. The objective of this study was to summarize contemporary regional experimental and global literature data to ascertain mean representative δ(15)N values for distinct food categories. A comprehensive data set of more than 12,000 analyzed food samples was summarized from the literature. Data originated from studies dealing with (1) authenticity tracing or origin control of food items, and (2) effects of fertilization or nutrition on δ(15)N values of plants or animals. Regional German food δ(15)N values revealed no major differences compared with the mean global values derived from the literature. We found that, in contrast to other food categories, historical faunal remains of pig and poultry are significantly enriched in (15)N compared to modern samples. This difference may be due to modern industrialized breeding practices. In some food categories variations in agricultural and feeding regimens cause significant differences in δ(15)N values that may lead to misinterpretations when only limited information is available.

  15. Using tracer technique to study the flow behavior of surfactant foam.

    PubMed

    Tsai, Yih-Jin; Chou, Feng-Chih; Cheng, Shin-Jen

    2009-07-30

    Surfactant foam was used to remove absorbed hydrocarbons from soils. The nature and extent of the foam pathway decide the efficiency of this technology. The characteristics and behavior of foam flow are difficult to visually observe. In this study, laboratory sandbox experiments were performed to estimate the flow behavior of surfactant foam and thus elucidate the properties and flow behavior of surfactant foam. To quantitatively determine the distribution of foam and evaluate accurately the flow field of foam in the soil, this study designed a special technique, applying micro-scale iron powder as a tracer. The foam generated with 4% (w/v) mixed solution of Span 60 and sodium dodecyl sulfate (SDS) showed an excellent stability and quality, which made it particularly apt for this study. The results indicated that the foam flows through the zone above the clay planes and also flows through the zone between the clay planes. The heterogeneous sand does not inhibit the invasion of foam flow. Moreover, the results of tracer tests and photographs of the foam distributions in sandbox were identical in the behavior of foam flow. This knowledge is valuable for providing insight into the foam remediation of contaminated soil.

  16. Using a Coupled Surface water/ Groundwater Model to Study Heat as a Tracer in Three Dimensions

    NASA Astrophysics Data System (ADS)

    Reeves, J.; Hatch, C. E.; Letcher, B. H.

    2014-12-01

    Heat as a tracer has proven to be an effective method for quantifying groundwater - surface water interactions. However, there remains a lack of controlled, experimental data to assess fundamental aspects of heat transport in porous media. There may be a disconnect between field and model-based studies, because: 1) model results have yet to be tested against data from controlled laboratory experiments, and 2) there are often too many variables in field studies to be thoroughly modeled without simplification. This study is comprised of a three-dimensional transient numerical model of heat flow through a porous media coupled with steady state fluid flow using COMSOL Multiphysics. Pressure and temperature outputs are compared to data measured in a laboratory flume. The 3D model enables exploration of the effects of oblique flow paths through a stream bed and/or banks with a (stream) surface water upper boundary on diurnal temperature records. By imposing known flow or temperature gradients in any direction, we can analyze the effects of these diverse gradients on the veracity of current heat as a tracer methods (which assume unidirectional flow) as well as develop valid error statistics for these methods in the presence of non-vertical flow.

  17. Study of conformations and hydrogen bonds in the configurational isomers of pyrrole-2-carbaldehyde oxime by 1H, 13C and 15N NMR spectroscopy combined with MP2 and DFT calculations and NBO analysis.

    PubMed

    Afonin, Andrei V; Ushakov, Igor A; Pavlov, Dmitry V; Ivanov, Andrei V; Mikhaleva, Al'bina I

    2010-09-01

    The (1)H, (13)C and (15)N NMR studies have shown that the E and Z isomers of pyrrole-2-carbaldehyde oxime adopt preferable conformation with the syn orientation of the oxime group with respect to the pyrrole ring. The syn conformation of E and Z isomers of pyrrole-2-carbaldehyde oxime is stabilized by the N-H...N and N-H...O intramolecular hydrogen bonds, respectively. The N-H...N hydrogen bond in the E isomer causes the high-frequency shift of the bridge proton signal by about 1 ppm and increase the (1)J(N, H) coupling by approximately 3 Hz. The bridge proton shows further deshielding and higher increase of the (1)J(N, H) coupling constant due to the strengthening of the N-H...O hydrogen bond in the Z isomer. The MP2 calculations indicate that the syn conformation of E and Z isomers is by approximately 3.5 kcal/mol energetically less favorable than the anti conformation. The calculations of (1)H shielding and (1)J(N, H) coupling in the syn and anti conformations allow the contribution to these constants from the N-H...N and N-H...O hydrogen bondings to be estimated. The NBO analysis suggests that the N-H...N hydrogen bond in the E isomer is a pure electrostatic interaction while the charge transfer from the oxygen lone pair to the antibonding orbital of the N-H bond through the N-H...O hydrogen bond occurs in the Z isomer. PMID:20623827

  18. Foliar retention of 15N tracers: implications for net canopy exchange in low- and high-elevation forest ecosystems

    SciTech Connect

    Garten Jr, Charles T; Schwab, Alison; Shirshac, Terri

    1998-04-01

    Nitrogen-15 ({sup 15}N) labelled ammonium and nitrate were applied to understory saplings in a low-elevation deciduous forest and a high-elevation coniferous forest during the 1993 growing season to estimate the minimum retention of inorganic N from wet deposition. Tissue samples were collected at both sites before and after the tracer applications to determine the initial and the final {sup 15}N content. The fraction of the tracer application retained by deciduous leaves or by current-year leaves and stems on conifers was calculated from measurements of {sup 15}N and total N content. At both study sites, tracer applications significantly increased the {sup 15}N content of sapling tissues, although there was no significant difference between the fractional retention of ammonium and nitrate. The results support earlier studies indicating that the foliar retention of {sup 15}N applied in simulated wet deposition is small. Our estimates of annual N uptake from wet deposition by the forest canopy at the low- and high-elevation study sites were only 14 and 7%, respectively. This study, along with prior studies of the different chemical forms of N deposition, indicates that canopy uptake of dry N deposition is a major contributor to the net canopy exchange of N in both forests.

  19. Preparation and characterization of 15N-enriched, size-defined heparan sulfate precursor oligosaccharides

    PubMed Central

    Sigulinsky, Crystal; Babu, Ponnusamy; Victor, Xylophone V.; Kuberan, Balagurunathan

    2009-01-01

    We report the preparation of size-defined [15N]N-acetylheparosan oligosaccharides from Escherichia coli-derived 15N-enriched N-acetylheparosan. Optimized growth conditions of E. coli in minimal media containing 15NH4Cl yielded [15N]N-acetylheparosan on a preparative scale. Depolymerization of [15N]N-acetylheparosan by heparitinase I yielded resolvable, even-numbered oligosaccharides ranging from disaccharide to icosaccharide. Anion-exchange chromatography-assisted fractionation afforded size-defined [15N]N-acetylheparosan oligosaccharides identifiable by ESI-TOFMS. These isotopically labeled oligosaccharides will prove to be valuable research tools for the chemoenzymatic synthesis of heparin and heparan sulfate oligosaccharides and for the study of their structural biology. PMID:19945695

  20. SF6 Tracer Release Study: A Contaminant Fate Study in Newtown Creek

    NASA Astrophysics Data System (ADS)

    Schmieder, P. J.; Ho, D. T.; Peter, S.; Simpson, H. J.; Flores, S.; Dugan, W. A.

    2004-12-01

    Newtown Creek is a 5.5km creek that discharges into the East River, a 25km strait connecting Long Island Sound to the north and the New York Harbor to the south. Surface runoff dominates the freshwater input into the creek, for natural tributaries no longer exist. The areas directly adjacent to the creek are highly industrialized, and New York City's largest Water Pollution Control Plant (WPCP) discharges directly into creek. In August 2004, we injected sulfur hexafluoride (SF6) into Newtown creek to study the fate of oil seeping into the creek from an underground oil spill and the fate of nutrient rich effluent from the WPCP. We monitored SF6 in Newtown Creek, the East River, and the Upper Bay of New York Harbor for 7 consecutive days following the injection in order to investigate the spreading patterns and transport mechanics of waters exiting the creek, and to determine the ultimate fate of the contaminants/solutes originating in Newtown Creek. Dissolved oxygen (DO) measurements were collected simultaneously with SF6 measurements. A strong DO gradient exists in the creek, where waters in the upper reaches are anoxic. We use SF6 data to calculate mean residence times for Newtown Creek waters. SF6 was detected above background concentrations approximately 15km to the south of the creek at the Verrazano Bridge only 1 day after the tracer injection. By combining the movements of the SF6 distribution, the position of the oxygen gradient, and the residence time of Newtown Creek water, we can determine a lower boundary for oxygen consumption rates.

  1. Geophysical Methods, Tracer Leakage, and Flow Modeling Studies at the West Pearl Queen Carbon Sequestration/EOR Pilot Site

    NASA Astrophysics Data System (ADS)

    Bromhal, G. S.; Wilson, T. H.; Wells, A.; Diehl, R.; Smith, D. H.

    2003-12-01

    Recently, a few thousand tons of CO2 were injected into the West Pearl Queen field, a depleted oil reservoir in southeastern New Mexico, for a pilot carbon sequestration project. Small amounts of 3 different perfluorocarbon tracers were injected with the CO2. Approximately 50 capillary absorption tube samplers (CATS) were located across the field within 2m of the grounds surface to detect the tracers in extremely small (~10-13L) quantities. After only several days, the CATS detected quantities of tracers at distances of up to 350m from the injection well. Greater amounts of tracers were detected in the different directions. The underground transport mechanism(s) are uncertain; however, appearance of tracer in the CATS after only a 6 day period suggests that CO2 movement may have occurred through near-surface processes. Subsequent tracer measurements made over 10 and 54 day time periods revealed continued tracer leakage. To try to understand the tracer information, we conducted lineament interpretations of the area using a black and white aerial photo taken in 1949, digital orthophotos, and Landsat TM imagery. Lineament interpretations revealed distinct northeast and northwest trending lineament sets. These directions coincided roughly with the direction of tracer-leakage into areas northwest and southwest of the injection well. The near-surface geology consists of a few-feet thick veneer of late Pleistocene and Holocene sand dunes covering the middle Pleistocene Mescalero caliche. A survey of the caliche was made using ground penetrating radar (GPR) to attempt to identify any preferential migration pathways. Modeling studies also were performed to identify the potential leakage pathways at the site. Because of the relatively fast appearance of tracers at large distances from the injection well, simple diffusion through the surface layers was ruled out. Wind patterns in the area have also made transport through the atmosphere and back into the ground highly unlikely

  2. Variability of the 15N Chemical Shielding Tensors in the B3 Domain of Protein G from 15N Relaxation Measurements at Several Fields

    PubMed Central

    Hall, Jennifer B.; Fushman, David

    2008-01-01

    We applied a combination of 15N relaxation and CSA/dipolar cross-correlation measurements at five magnetic fields (9.4, 11.7, 14.1, 16.4, and 18.8 Tesla) to determine the 15N chemical shielding tensors for backbone amides in protein G in solution. The data were analyzed using various model-independent approaches and those based on Lipari-Szabo approximation, all of them yielding similar results. The results indicate a range of site-specific values of the anisotropy (CSA) and orientation of the 15N chemical shielding tensor, similar to those in ubiquitin. Assuming a Gaussian distribution of the 15N CSA values, the mean anisotropy is -173.9 to -177.2 ppm (for 1.02-Å NH-bond length) and the site-so-site CSA variability is ±17.6 to ±21.4 ppm, depending on the method used. This CSA variability is significantly larger than derived previously for ribonuclease H or recently, using “meta-analysis” for ubiquitin. Standard interpretation of 15N relaxation studies of backbone dynamics in proteins involves an a priori assumption of a uniform 15N CSA. We show that this assumption leads to a significant discrepancy between the order parameters obtained at different fields. Using the site-specific CSAs obtained from our study removes this discrepancy and allows simultaneous fit of relaxation data at all five fields to Lipari-Szabo spectral densities. These findings emphasize the necessity of taking into account the variability of 15N CSA for accurate analysis of protein dynamics from 15N relaxation measurements. PMID:16771499

  3. Dual tracer autoradiographic study with thallium-201 and radioiodinated fatty acid in cardiomyopathic hamsters

    SciTech Connect

    Kurata, C.; Kobayashi, A.; Yamazaki, N.

    1989-01-01

    To investigate the usefulness of myocardial scintigraphy with radioiodinated 15-(p-iodophenyl)-3-R,S-methylpentadecanoic acid (BMIPP) in cardiomyopathy, quantitative dual tracer autoradiographic study with /sup 201/Tl and (/sup 125/I)BMIPP was performed in 27 cardiomyopathic Bio 14.6 Syrian hamsters and eight normal hamsters. Furthermore, 16 Bio 14.6 Syrian hamsters aged 21 days were divided into verapamil-treated (during 70 days) and control groups (respectively, n = 8), and autoradiography with /sup 201/Tl and (/sup 125/I)BMIPP was performed. Quantitative autoradiography demonstrated an uncoupling of /sup 201/Tl and (/sup 125/I)BMIPP distributions and a regional heterogeneity of (/sup 125/I)BMIPP distribution in cardiomyopathic hamsters aged more than 2 mo, while normal hamsters showed only mild heterogeneity of (/sup 125/I)BMIPP distribution without an uncoupling of tracers. Age-matched comparison between normal and cardiomyopathic hamsters (5-8 mo old) demonstrated that a difference between their (/sup 125/I)BMIPP distributions are more marked than that between their /sup 201/Tl distributions. Furthermore, (/sup 125/I)BMIPP visualized effects of verapamil on cardiomyopathy more distinctly than did /sup 201/Tl. In conclusion, myocardial imaging with (/sup 123/I)BMIPP could be useful for investigating cardiomyopathy and evaluating the efficacy of therapeutic intervention in patients with cardiomyopathy.

  4. Identification and characterization of conservative organic tracers for use as hydrologic tracers for the Yucca Mountain Site characterization study. Progress report, July 1, 1995--September 30, 1995

    SciTech Connect

    Stetzenbach, K.; Farnham, I.

    1995-12-01

    Laboratory work on tracers to be used for C-Well tracer tests is complete. Solubilities for fluorinated benzoic acids in J13 water were determined and the stability of these compounds to both degradation and sorption on ground tuff measured in batch and column tests.

  5. The degree of urbanization across the globe is not reflected in the δ(15)N of seagrass leaves.

    PubMed

    Christiaen, Bart; Bernard, Rebecca J; Mortazavi, Behzad; Cebrian, Just; Ortmann, Alice C

    2014-06-30

    Many studies show that seagrass δ(15)N ratios increase with the amount of urbanization in coastal watersheds. However, there is little information on the relationship between urbanization and seagrass δ(15)N ratios on a global scale. We performed a meta-analysis on seagrass samples from 79 independent locations to test if seagrass δ(15)N ratios correlate with patterns of population density and fertilizer use within a radius of 10-200 km around the sample locations. Our results show that seagrass δ(15)N ratios are more influenced by intergeneric and latitudinal differences than the degree of urbanization or the amount of fertilizer used in nearby watersheds. The positive correlation between seagrass δ(15)N ratios and latitude hints at an underlying pattern in discrimination or a latitudinal gradient in the (15)N isotopic signature of nitrogen assimilated by the plants. The actual mechanisms responsible for the correlation between δ(15)N and latitude remain unknown.

  6. PERFLUOROCARBON GAS TRACER STUDIES TO SUPPORT RISK ASSESSMENT MODELING OF CRITICAL INFRASTRUCTURE SUBJECTED TO TERRORIST ATTACKS.

    SciTech Connect

    SULLIVAN, T.M.; HEISER, J.; WATSON, T.; ALLWINE, K.J.; FLAHERTY, J.E.

    2006-05-06

    Development of real-time predictive modeling to identify the dispersion and/or source(s) of airborne weapons of mass destruction including chemical, biological, radiological, and nuclear material in urban environments is needed to improve response to potential releases of these materials via either terrorist or accidental means. These models will also prove useful in defining airborne pollution dispersion in urban environments for pollution management/abatement programs. Predicting gas flow in an urban setting on a scale of less than a few kilometers is a complicated and challenging task due to the irregular flow paths that occur along streets and alleys and around buildings of different sizes and shapes, i.e., ''urban canyons''. In addition, air exchange between the outside and buildings and subway areas further complicate the situation. Transport models that are used to predict dispersion of WMD/CBRN materials or to back track the source of the release require high-density data and need defensible parameterizations of urban processes. Errors in the data or any of the parameter inputs or assumptions will lead to misidentification of the airborne spread or source release location(s). The need for these models to provide output in a real-time fashion if they are to be useful for emergency response provides another challenge. To improve the ability of New York City's (NYC's) emergency management teams and first response personnel to protect the public during releases of hazardous materials, the New York City Urban Dispersion Program (UDP) has been initiated. This is a four year research program being conducted from 2004 through 2007. This paper will discuss ground level and subway Perfluorocarbon tracer (PFT) release studies conducted in New York City. The studies released multiple tracers to study ground level and vertical transport of contaminants. This paper will discuss the results from these tests and how these results can be used for improving transport models

  7. Perfluorocarbon Gas Tracer Studies to Support Risk Assessment Modeling of Critical Infrastructure Subjected to Terrorist Attacks

    SciTech Connect

    Sullivan, Terry M.; Heiser, John H.; Watson, Tom; Allwine, K Jerry; Flaherty, Julia E.

    2006-05-06

    Development of real-time predictive modeling to identify the dispersion and/or source(s) of airborne weapons of mass destruction including chemical, biological, radiological, and nuclear material in urban environments is needed to improve response to potential releases of these materials via either terrorist or accidental means. These models will also prove useful in defining airborne pollution dispersion in urban environments for pollution management/abatement programs. Predicting gas flow in an urban setting on a scale of less than a few kilometers is a complicated and challenging task due to the irregular flow paths that occur along streets and alleys and around buildings of different sizes and shapes, i.e., “urban canyons”. In addition, air exchange between the outside and buildings and subway areas further complicate the situation. Transport models that are used to predict dispersion of WMD/CBRN materials or to back track the source of the release require high-density data and need defensible parameterizations of urban processes. Errors in the data or any of the parameter inputs or assumptions will lead to misidentification of the airborne spread or source release location(s). The need for these models to provide output in a real-time fashion if they are to be useful for emergency response provides another challenge. To improve the ability of New York City’s (NYC's) emergency management teams and first response personnel to protect the public during releases of hazardous materials, the New York City Urban Dispersion Program (UDP) has been initiated. This is a four year research program being conducted from 2004 through 2007. This paper will discuss ground level and subway Perfluorocarbon tracer (PFT) release studies conducted in New York City. The studies released multiple tracers to study ground level and vertical transport of contaminants. This paper will discuss the results from these tests and how these results can be used for improving transport

  8. Nitrogen stable isotope composition (δ15N) of vehicle-emitted NOx.

    PubMed

    Walters, Wendell W; Goodwin, Stanford R; Michalski, Greg

    2015-02-17

    The nitrogen stable isotope ratio of NOx (δ(15)N-NOx) has been proposed as a regional indicator for NOx source partitioning; however, knowledge of δ(15)N values from various NOx emission sources is limited. This study presents a detailed analysis of δ(15)N-NOx emitted from vehicle exhaust, the largest source of anthropogenic NOx. To accomplish this, NOx was collected from 26 different vehicles, including gasoline and diesel-powered engines, using a modification of a NOx collection method used by the United States Environmental Protection Agency, and δ(15)N-NOx was analyzed. The vehicles sampled in this study emitted δ(15)N-NOx values ranging from -19.1 to 9.8‰ that negatively correlated with the emitted NOx concentrations (8.5 to 286 ppm) and vehicle run time because of kinetic isotope fractionation effects associated with the catalytic reduction of NOx. A model for determining the mass-weighted δ(15)N-NOx from vehicle exhaust was constructed on the basis of average commute times, and the model estimates an average value of -2.5 ± 1.5‰, with slight regional variations. As technology improvements in catalytic converters reduce cold-start emissions in the future, it is likely to increase current δ(15)N-NOx values emitted from vehicles. PMID:25621737

  9. Nitrogen stable isotope composition (δ15N) of vehicle-emitted NOx.

    PubMed

    Walters, Wendell W; Goodwin, Stanford R; Michalski, Greg

    2015-02-17

    The nitrogen stable isotope ratio of NOx (δ(15)N-NOx) has been proposed as a regional indicator for NOx source partitioning; however, knowledge of δ(15)N values from various NOx emission sources is limited. This study presents a detailed analysis of δ(15)N-NOx emitted from vehicle exhaust, the largest source of anthropogenic NOx. To accomplish this, NOx was collected from 26 different vehicles, including gasoline and diesel-powered engines, using a modification of a NOx collection method used by the United States Environmental Protection Agency, and δ(15)N-NOx was analyzed. The vehicles sampled in this study emitted δ(15)N-NOx values ranging from -19.1 to 9.8‰ that negatively correlated with the emitted NOx concentrations (8.5 to 286 ppm) and vehicle run time because of kinetic isotope fractionation effects associated with the catalytic reduction of NOx. A model for determining the mass-weighted δ(15)N-NOx from vehicle exhaust was constructed on the basis of average commute times, and the model estimates an average value of -2.5 ± 1.5‰, with slight regional variations. As technology improvements in catalytic converters reduce cold-start emissions in the future, it is likely to increase current δ(15)N-NOx values emitted from vehicles.

  10. Tracer study of oxygen and hydrogen uptake by Mg alloys in air with water vapor

    SciTech Connect

    Brady, M. P.; Fayek, M.; Meyer, H. M.; Leonard, D. N.; Elsentriecy, H. H.; Unocic, K. A.; Anovitz, L. M.; Cakmak, E.; Keiser, J. R.; Song, G. L.; Davis, B.

    2015-05-15

    We studied the pure oxidation of Mg, Mg–3Al–1Zn (AZ31B), and Mg–1Zn–0.25Zr–<0.5Nd (ZE10A) at 85 °C in humid air using sequential exposures with H218O and D216O for water vapor. Incorporation of 18O in the hydroxide/oxide films indicated that oxygen from water vapor participated in the reaction. Moreover, penetration of hydrogen into the underlying metal was observed, particularly for the Zr- and Nd-containing ZE10A. Isotopic tracer profiles suggested a complex mixed inward/outward film growth mechanism.

  11. Rocky Flats 1990--91 winter validation tracer study: Volume 1

    SciTech Connect

    Brown, K.J.

    1991-10-01

    During the winter of 1990--91, North American Weather Consultants (NAWC) and its subcontractor, ABB Environmental Services (ABBES), conducted a Winter Validation Study (WVS) for EG&G Rocky Flats involving 12 separate tracer experiments conducted between February 3 and February 19, 1991. Six experiments were conducted during nighttime hours and four experiments were conducted during daytime hours. In addition, there was one day/night and one night/day transitional experiment conducted. The primary purpose of the WVS was to gather data to further the approval process for the Terrain Responsive Atmospheric Code (TRAC). TRAC is an atmospheric dispersion model developed and operated at the Department of Energy`s (DOE`s) Rocky Flats Plant (RFP) north of Denver, Colorado. A secondary objective was to gather data that will serve to validate the TRAC model physics.

  12. Sensory innervation of the suprarenal gland in the albino rat: a fluorescent tract tracer study.

    PubMed

    Sangari, S K; Khatri, K; Sengupta, P

    1998-01-01

    The afferent innervation of the suprarenal gland was studied by using a fluorescent tract tracer in the adult albino rat. The left suprarenal gland was injected slowly with 5 microl of 2% aqueous suspension of Fast blue. After a survival period of 4-5 days, the dorsal root ganglia were dissected out and 15-microm-thick plastic (JB 4) sections were examined under the fluorescent microscope. The labelled neurons were seen from the third thoracic to second lumbar dorsal root ganglia, ipsilateral to the site of injection with maximum concentration from T6 to T11. These primary sensory neurons were round to oval in shape, varied from 7 microm to 40 microm in size, and were distributed randomly in the dorsal root ganglia. The labelling of the primary sensory neurons in the dorsal root ganglia confirms the presence of sensory nerve endings in the suprarenal gland that may be responsible for the vascular distension and hormonal release.

  13. Simple approach for the preparation of (15-15)N2-enriched water for nitrogen fixation assessments: evaluation, application and recommendations.

    PubMed

    Klawonn, Isabell; Lavik, Gaute; Böning, Philipp; Marchant, Hannah K; Dekaezemacker, Julien; Mohr, Wiebke; Ploug, Helle

    2015-01-01

    Recent findings revealed that the commonly used (15)N2 tracer assay for the determination of dinitrogen (N2) fixation can underestimate the activity of aquatic N2-fixing organisms. Therefore, a modification to the method using pre-prepared (15-15)N2-enriched water was proposed. Here, we present a rigorous assessment and outline a simple procedure for the preparation of (15-15)N2-enriched water. We recommend to fill sterile-filtered water into serum bottles and to add (15-15)N2 gas to the water in amounts exceeding the standard N2 solubility, followed by vigorous agitation (vortex mixing ≥ 5 min). Optionally, water can be degassed at low-pressure (≥950 mbar) for 10 min prior to the (15-15)N2 gas addition to indirectly enhance the (15-15)N2 concentration. This preparation of (15-15)N2-enriched water can be done within 1 h using standard laboratory equipment. The final (15)N-atom% excess was 5% after replacing 2-5% of the incubation volume with (15-15)N2-enriched water. Notably, the addition of (15-15)N2-enriched water can alter levels of trace elements in the incubation water due to the contact of (15-15)N2-enriched water with glass, plastic and rubber ware. In our tests, levels of trace elements (Fe, P, Mn, Mo, Cu, Zn) increased by up to 0.1 nmol L(-1) in the final incubation volume, which may bias rate measurements in regions where N2 fixation is limited by trace elements. For these regions, we tested an alternative way to enrich water with (15-15)N2. The (15-15)N2 was injected as a bubble directly to the incubation water, followed by gentle shaking. Immediately thereafter, the bubble was replaced with water to stop the (15-15)N2 equilibration. This approach achieved a (15)N-atom% excess of 6.6 ± 1.7% when adding 2 mL (15-15)N2 per liter of incubation water. The herein presented methodological tests offer guidelines for the (15)N2 tracer assay and thus, are crucial to circumvent methodological draw-backs for future N2 fixation assessments. PMID:26300853

  14. Simple approach for the preparation of 15−15N2-enriched water for nitrogen fixation assessments: evaluation, application and recommendations

    PubMed Central

    Klawonn, Isabell; Lavik, Gaute; Böning, Philipp; Marchant, Hannah K.; Dekaezemacker, Julien; Mohr, Wiebke; Ploug, Helle

    2015-01-01

    Recent findings revealed that the commonly used 15N2 tracer assay for the determination of dinitrogen (N2) fixation can underestimate the activity of aquatic N2-fixing organisms. Therefore, a modification to the method using pre-prepared 15−15N2-enriched water was proposed. Here, we present a rigorous assessment and outline a simple procedure for the preparation of 15−15N2-enriched water. We recommend to fill sterile-filtered water into serum bottles and to add 15−15N2 gas to the water in amounts exceeding the standard N2 solubility, followed by vigorous agitation (vortex mixing ≥ 5 min). Optionally, water can be degassed at low-pressure (≥950 mbar) for 10 min prior to the 15−15N2 gas addition to indirectly enhance the 15−15N2 concentration. This preparation of 15−15N2-enriched water can be done within 1 h using standard laboratory equipment. The final 15N-atom% excess was 5% after replacing 2–5% of the incubation volume with 15−15N2-enriched water. Notably, the addition of 15−15N2-enriched water can alter levels of trace elements in the incubation water due to the contact of 15−15N2-enriched water with glass, plastic and rubber ware. In our tests, levels of trace elements (Fe, P, Mn, Mo, Cu, Zn) increased by up to 0.1 nmol L−1 in the final incubation volume, which may bias rate measurements in regions where N2 fixation is limited by trace elements. For these regions, we tested an alternative way to enrich water with 15−15N2. The 15−15N2 was injected as a bubble directly to the incubation water, followed by gentle shaking. Immediately thereafter, the bubble was replaced with water to stop the 15−15N2 equilibration. This approach achieved a 15N-atom% excess of 6.6 ± 1.7% when adding 2 mL 15−15N2 per liter of incubation water. The herein presented methodological tests offer guidelines for the 15N2 tracer assay and thus, are crucial to circumvent methodological draw-backs for future N2 fixation assessments. PMID:26300853

  15. Production of 15N-depleted biomass during cyanobacterial N2-fixation at high Fe concentrations

    NASA Astrophysics Data System (ADS)

    Zerkle, Aubrey L.; Junium, Christopher K.; Canfield, Donald E.; House, Christopher H.

    2008-09-01

    In this study we examine the effects of varying Fe, Mo, and P concentrations on δ15N fractionation during N2 fixation in the cyanobacterium Anabaena variabilis. We show that when grown in Fe-enriched media ([Fe] ≥ 50 nM), this organism produces biomass up to 3‰ lower in δ15N than when grown in Fe-limited media ([Fe] < 50 nM). A compilation of our data with previous measurements of δ15N in N2-fixing cyanobacteria reveals a general trend toward the production of more 15N-depleted biomass at higher Fe concentrations. We discuss our results in the context of negative δ15N values preserved in Archean and some Phanerozoic sediments, generally attributed to the production of marine organic matter with low δ15N by N2 fixation (and potentially NH4+ regeneration) during periods of fluctuating nutrient dynamics. We suggest that enhanced Fe availability during periods of widespread ocean anoxia can further stimulate the production of 15N-depleted biomass by N2-fixing organisms, contributing to the isotopic record.

  16. NMR study of non-structural proteins--part I: (1)H, (13)C, (15)N backbone and side-chain resonance assignment of macro domain from Mayaro virus (MAYV).

    PubMed

    Melekis, Efstathios; Tsika, Aikaterini C; Lichière, Julie; Chasapis, Christos T; Margiolaki, Irene; Papageorgiou, Nicolas; Coutard, Bruno; Bentrop, Detlef; Spyroulias, Georgios A

    2015-04-01

    Macro domains are ADP-ribose-binding modules present in all eukaryotic organisms, bacteria and archaea. They are also found in non-structural proteins of several positive strand RNA viruses such as alphaviruses. Here, we report the high yield expression and preliminary structural analysis through solution NMR spectroscopy of the macro domain from New World Mayaro Alphavirus. The recombinant protein was well-folded and in a monomeric state. An almost complete sequence-specific assignment of its (1)H, (15)N and (13)C resonances was obtained and its secondary structure determined by TALOS+.

  17. Conducting Graduate Tracer Studies for Quality Assurance in East African Universities: A Focus on Graduate Students Voices on Quality Culture

    ERIC Educational Resources Information Center

    Badiru, Egesah Omar; Wahome, Mary

    2016-01-01

    The purpose of this paper is to propose a guide for graduate trace studies (GTS) to be adopted by universities and other higher education institutions (HEIs) in East Africa. Their essential role notwithstanding, graduate tracer studies present viable opportunities through which quality assurance (QA) can be institutionalized and mainstreamed in…

  18. Studying coupled hydrological and micro-biological processes by means of tracer injections and mathematical models

    NASA Astrophysics Data System (ADS)

    Worman, A.; Kjellin, J. P.; Lindahl, A.; Johansson, H.

    2005-05-01

    To throw light on coupled hydrological, chemical and microbiological processes in treatment wetlands, this study uses both radioactive water and reactive tracers. A tracer mixture consisting of tritiated water, P-32 in the form of PO4- and N-15 in the form of N2O was injected to the 2.6 hectare large Ekeby wetland, Sweden. From the breakthrough curves of tritium, the mean residence time of water in pond 1 can be estimated to be about 3 to 3.5 days. The total injected activity of phosphorus was 17.98 GBq and about 13.73 GBq was recovered at the outlet during the investigation period ending 10 days and 16 hours after the start of the injection. This implies that 24% of the phosphate solution was removed in the November - December period in which the experiment was performed. The total injected amount of N-15 was 42.1 grams and 29.6 grams was retained at the effluent. This means that 30% of the nitrogen was either retained in the wetland or removed due to denitrification. An analysis of regular monitoring data shows that the annual removal rate in the entire wetland (each flow line passes two ponds in series) is about 50% for total phosphorus and 25% for total nitrogen. Probably, the most important mechanism for this removal is adsorption onto particulate matter and deposition. Analyses of vegetation material indicate that a certain (minor) fraction was adsorbed to submersed and emerging macrophytes, like Elodera Canadensis, Thypa sp. (Cattail) and Glyceria sp. (Manna grass). A 2D mathematical model for both water flow and solute transport could explain the N-transport through the wetland. The model accounts for the rate-limited exchange with bed sediments and denitrification in the water and bed sediment. Independent batch tests indicate a particularly high microbiological activity in the bed sediments. The rate-limited exchange with the bed limits also the denitrification capacity of the wetland.

  19. Hydrodynamics of the bank storage effect--An integrated tracer and modeling study

    SciTech Connect

    Hibbs, B.J.; Sharp, J.M. Jr. . Dept. of Geological Sciences)

    1992-01-01

    The hydrodynamics of the bank storage effect were studied in an integrated modeling and tracer investigation along the Lower Colorado River of Texas. Variations in dissolved solids between river water and ground water created ideal conditions for analysis of stream/ground-water interaction. Three sites were instrumented with observation-well and stream-stage recorders. At each site, head, temperature, and chemical data were collected during low-flow, high-flow, and flood-wave conditions. The authors observed that aquifer head responded relatively rapidly to changing stream stage, but tracer breakthrough curves were generally not observed even for wells very close to the Colorado River. The water-table response lagged behind the average head response in the observation wells. This is created by an elastic response in the shallow, unconfined aquifer to rapid changes in stream stage. In one case, a stratified salinity profile was observed in the alluvial wells prior to the flood peak. The authors infer that the lower salinity water in the upper portion of the thin aquifer was the result of recharge from unusually high winter precipitation. The salinity profile became first more uniformly saline and then less as the river water finally reached the well. They modeled aquifer responses with HST3D and, although this aquifer is clearly recognizable as an unconfined aquifer, the confined model gave a superior simulation. Both modeling and field data support the hypothesis of elastic head recovery response in the unconfined aquifer and demonstrate the need for caution in using alluvial response in the unconfined aquifer and demonstrate the need for caution in using alluvial responses to stream stage fluctuations to determine hydraulic diffusivity. Partial differential equations are presented which consider the elastic response.

  20. Biochemical tracers reveal intra-specific differences in the food webs utilized by individual seabirds.

    PubMed

    Hebert, Craig E; Weseloh, D V Chip; Gauthier, Lewis T; Arts, Michael T; Letcher, Robert J

    2009-05-01

    Food web structure regulates the pathways and flow rates of energy, nutrients, and contaminants to top predators. Ecologically and physiologically meaningful biochemical tracers provide a means to characterize and quantify these transfers within food webs. In this study, changes in the ratios of stable N isotopes (e.g., delta(15)N), fatty acids (FA), and persistent contaminants were used to trace food web pathways utilized by herring gulls (Larus argentatus) breeding along the shores of the St Lawrence River, Canada. Egg delta(15)N values varied significantly among years and were used as an indicator of gull trophic position. Temporal trends in egg delta(15)N values were related to egg FA profiles. In years when egg delta(15)N values were greater, egg FA patterns reflected the consumption of more aquatic prey. Egg delta(15)N values were also correlated with annual estimates of prey fish abundance. These results indicated that temporal changes in aquatic prey availability were reflected in the gull diet (as inferred from ecological tracer profiles in gull eggs). Analysis of individual eggs within years confirmed that birds consuming more aquatic prey occupied higher trophic positions. Furthermore, increases in trophic position were associated with increased concentrations of most persistent organic contaminants in eggs. However, levels of highly brominated polybrominated diphenyl ether congeners, e.g, 2,2',3,3',4,4',5,5',6,6'-decabromoDE (BDE-209), showed a negative relationship with trophic position. These contrasting findings reflected differences among contaminant groups/homologs in terms of their predominant routes of transfer, i.e., aquatic versus terrestrial food webs. High trophic level omnivores, e.g., herring gulls, are common in food webs. By characterizing ecological tracer profiles in such species we can better understand spatial, temporal, and individual differences in pathways of contaminant, energy, and nutrient flow.

  1. Predictive value of tracer studies for /sup 131/I treatment in hyperthyroid cats

    SciTech Connect

    Broome, M.R.; Turrel, J.M.; Hays, M.T.

    1988-02-01

    In 76 cats with hyperthyroidism, peak thyroidal radioiodine (/sup 131/I) uptakes and effective half-lives were determined after administration of tracer and therapeutic activities of /sup 131/I. In 6 additional hyperthyroid cats, only peak thyroidal uptakes after administration of tracer and therapeutic activities of /sup 131/I were determined. Good correlation was found between peak thyroidal uptakes of tracer and therapeutic /sup 131/I; however, only fair correlation was observed between effective half-lives. In 79% of the cats, the effective half-life for therapeutic /sup 131/I was longer than that for tracer /sup 131/I. After administration of therapeutic activity of /sup 131/I, monoexponential and biphasic decay curves were observed in 51 and 16 cats, respectively. Using therapeutic kinetic data, radiation doses to the thyroid gland were calculated retrospectively on the basis of 2 methods for determining the activity of /sup 131/I administered: (1) actual administration of tracer-compensated activity and (2) hypothetic administration of uniform activity (3 mCi). Because of the good predictive ability of tracer kinetic data for the therapeutic kinetic data, the tracer-compensated radiation doses came significantly (P = 0.008) closer to the therapeutic goal than did the uniform-activity doses. In addition, the use of tracer kinetic information reduced the extent of the tendency for consistently high uniform-activity doses. A manual method for acquiring tracer kinetic data was developed and was an acceptable alternative to computerized techniques. Adoption of this method gives individuals and institutions with limited finances the opportunity to characterize the iodine kinetics in cats before proceeding with administration of therapeutic activities of /sup 131/I.

  2. Light-mediated 15N fractionation in Caribbean gorgonian octocorals: implications for pollution monitoring

    NASA Astrophysics Data System (ADS)

    Baker, D. M.; Kim, K.; Andras, J. P.; Sparks, J. P.

    2011-09-01

    The stable nitrogen isotope ratio ( δ 15N) of coral tissue is a useful recorder of anthropogenic pollution in tropical marine ecosystems. However, little is known of the natural environmentally induced fractionations that affect our interpretation of coral δ 15N values. In symbiotic scleractinians, light affects metabolic fractionation of N during photosynthesis, which may confound the identification of N pollution between sites of varied depth or turbidity. Given the superiority of octocorals for δ 15N studies, our goal was to quantify the effect of light on gorgonian δ 15N in the context of monitoring N pollution sources. Using field collections, we show that δ 15N declined by 1.4‰ over 20 m depth in two species of gorgonians, the common sea fan, Gorgonia ventalina, and the slimy sea plume, Pseudopterogorgia americana. An 8-week laboratory experiment with P. americana showed that light, not temperature causes this variation, whereby the lowest fractionation of the N source was observed in the highest light treatment. Finally, we used a yearlong reciprocal depth transplant experiment to quantify the time frame over which δ 15N changes in G. ventalina as a function of light regime . Over the year, δ 15N was unchanged and increased slightly in the deep control colonies and shallow colonies transplanted to the deep site, respectively. Within 6 months, colonies transplanted from deep to shallow became enriched by 0.8‰, mirroring the enrichment observed in the shallow controls, which was likely due to the combined effect of an increase in the source δ 15N and reduced fractionation. We conclude that light affects gorgonian δ 15N fractionation and should be considered in sampling designs for N pollution monitoring. However, these fractionations are small relative to differences observed between natural and anthropogenic N sources.

  3. Nitrogen isotope tracers of high-temperature fluid-rock interactions: Case study of the Catalina Schist, California

    NASA Astrophysics Data System (ADS)

    Bebout, Gray E.

    1997-09-01

    Nitrogen isotope data for metasomatized rocks, veins, and pegmatites in the Catalina Schist subduction zone metamorphic complex allow futher characterization of complex, high-P/T metasomatic proceses and evaluation of the scales of isotopic equilibration and fluid transport during subduction-zone metamorphism. Throughout the Catalina Schist, N resides predominantly as NH 4+ in white mica, which occurs in nearly all bulk compositions (i.e., metasedimentary, metamafic and, to a lesser extent, metaultramafic mélange) at all grades. Within each metamorphic unit of the Catalina Schist (ranging in grade from lawsonite-albite to amphibolite facies), δ 15N values of mica in metasomatized metamafic and metaultramafic rocks are consistent with the metasomatic addition of N from nearby, devolatilizing metasedimentary rocks into the initially N-poor mafic and ultramafic rocks. Within each unit, uniformity of mica δ 15N in metasomatized rocks relative to the δ 15N of metasedimentary rocks in the same unit implies mixing of N from nearby, heterogeneous metasedimentary sources, perhaps producing fluids with unifrom δ 15N at up to the kilometer scale. However, the trend in δ 15N of metasedimentary sources, with increasing metamorphic grade is inconsistent with larger scale up-temperature transfer of fluid (in this case, N 2-bearing) in the Catalina Schist paleosubduction zone; such flow (at scales of up to tens of kilometers) has been inferred through previous oxygen isotope study. Nitrogen isotope compositions are instead believed to have been controlled at a more local scale than the O isotope systematics, due to the more rock-dominated fluid-rock mass balance for N. The δ 15N of muscovite in leucosomes and pegmatites in amphibolite-grade metasedimentary exposures matches that of muscovite in metasedimentary hosts, implying minimal N-isotope fractionation during migmatization processes and possible transfer of metasedimentary N-isotope signatures in silicate melts. These

  4. Application of Nitrogen and Carbon Stable Isotopes (δ15N and δ13C) to Quantify Food Chain Length and Trophic Structure

    PubMed Central

    Perkins, Matthew J.; McDonald, Robbie A.; van Veen, F. J. Frank; Kelly, Simon D.; Rees, Gareth; Bearhop, Stuart

    2014-01-01

    Increasingly, stable isotope ratios of nitrogen (δ15N) and carbon (δ13C) are used to quantify trophic structure, though relatively few studies have tested accuracy of isotopic structural measures. For laboratory-raised and wild-collected plant-invertebrate food chains spanning four trophic levels we estimated nitrogen range (NR) using δ15N, and carbon range (CR) using δ13C, which are used to quantify food chain length and breadth of trophic resources respectively. Across a range of known food chain lengths we examined how NR and CR changed within and between food chains. Our isotopic estimates of structure are robust because they were calculated using resampling procedures that propagate variance in sample means through to quantified uncertainty in final estimates. To identify origins of uncertainty in estimates of NR and CR, we additionally examined variation in discrimination (which is change in δ15N or δ13C from source to consumer) between trophic levels and among food chains. δ15N discrimination showed significant enrichment, while variation in enrichment was species and system specific, ranged broadly (1.4‰ to 3.3‰), and importantly, propagated variation to subsequent estimates of NR. However, NR proved robust to such variation and distinguished food chain length well, though some overlap between longer food chains infers a need for awareness of such limitations. δ13C discrimination was inconsistent; generally no change or small significant enrichment was observed. Consequently, estimates of CR changed little with increasing food chain length, showing the potential utility of δ13C as a tracer of energy pathways. This study serves as a robust test of isotopic quantification of food chain structure, and given global estimates of aquatic food chains approximate four trophic levels while many food chains include invertebrates, our use of four trophic level plant-invertebrate food chains makes our findings relevant for a majority of ecological systems

  5. Application of nitrogen and carbon stable isotopes (δ(15)N and δ(13)C) to quantify food chain length and trophic structure.

    PubMed

    Perkins, Matthew J; McDonald, Robbie A; van Veen, F J Frank; Kelly, Simon D; Rees, Gareth; Bearhop, Stuart

    2014-01-01

    Increasingly, stable isotope ratios of nitrogen (δ(15)N) and carbon (δ(13)C) are used to quantify trophic structure, though relatively few studies have tested accuracy of isotopic structural measures. For laboratory-raised and wild-collected plant-invertebrate food chains spanning four trophic levels we estimated nitrogen range (NR) using δ(15)N, and carbon range (CR) using δ(13)C, which are used to quantify food chain length and breadth of trophic resources respectively. Across a range of known food chain lengths we examined how NR and CR changed within and between food chains. Our isotopic estimates of structure are robust because they were calculated using resampling procedures that propagate variance in sample means through to quantified uncertainty in final estimates. To identify origins of uncertainty in estimates of NR and CR, we additionally examined variation in discrimination (which is change in δ(15)N or δ(13)C from source to consumer) between trophic levels and among food chains. δ(15)N discrimination showed significant enrichment, while variation in enrichment was species and system specific, ranged broadly (1.4‰ to 3.3‰), and importantly, propagated variation to subsequent estimates of NR. However, NR proved robust to such variation and distinguished food chain length well, though some overlap between longer food chains infers a need for awareness of such limitations. δ(13)C discrimination was inconsistent; generally no change or small significant enrichment was observed. Consequently, estimates of CR changed little with increasing food chain length, showing the potential utility of δ(13)C as a tracer of energy pathways. This study serves as a robust test of isotopic quantification of food chain structure, and given global estimates of aquatic food chains approximate four trophic levels while many food chains include invertebrates, our use of four trophic level plant-invertebrate food chains makes our findings relevant for a majority of

  6. Compound-Specific δ15N Amino Acid Measurements in Littoral Mussels in the California Upwelling Ecosystem: A New Approach to Generating Baseline δ15N Isoscapes for Coastal Ecosystems

    PubMed Central

    Vokhshoori, Natasha L.; McCarthy, Matthew D.

    2014-01-01

    We explored δ15N compound-specific amino acid isotope data (CSI-AA) in filter-feeding intertidal mussels (Mytilus californianus) as a new approach to construct integrated isoscapes of coastal primary production. We examined spatial δ15N gradients in the California Upwelling Ecosystem (CUE), determining bulk δ15N values of mussel tissue from 28 sites between Port Orford, Oregon and La Jolla, California, and applying CSI-AA at selected sites to decouple trophic effects from isotopic values at the base of the food web. Bulk δ15N values showed a strong linear trend with latitude, increasing from North to South (from ∼7‰ to ∼12‰, R2 = 0.759). In contrast, CSI-AA trophic position estimates showed no correlation with latitude. The δ15N trend is therefore most consistent with a baseline δ15N gradient, likely due to the mixing of two source waters: low δ15N nitrate from the southward flowing surface California Current, and the northward transport of the California Undercurrent (CUC), with15N-enriched nitrate. This interpretation is strongly supported by a similar linear gradient in δ15N values of phenylalanine (δ15NPhe), the best AA proxy for baseline δ15N values. We hypothesize δ15NPhe values in intertidal mussels can approximate annual integrated δ15N values of coastal phytoplankton primary production. We therefore used δ15NPhe values to generate the first compound-specific nitrogen isoscape for the coastal Northeast Pacific, which indicates a remarkably linear gradient in coastal primary production δ15N values. We propose that δ15NPhe isoscapes derived from filter feeders can directly characterize baseline δ15N values across major biochemical provinces, with potential applications for understanding migratory and feeding patterns of top predators, monitoring effects of climate change, and study of paleo- archives. PMID:24887109

  7. The Experience of Receiving and Then Losing a Scholarship: A Tracer Study of Secondary School Scholarship Recipients in Uganda

    ERIC Educational Resources Information Center

    Watson, Cathy; Chapman, David W.; Okurut, Charles Opolot

    2014-01-01

    This study reports findings of a tracer that investigated differences in the profile and subsequent experiences of scholarship recipients in Uganda who were able to complete the lower secondary school cycle (O level) without interruption (N = 174) and those that dropped out before completing their O-level cycle (N = 51), thereby losing their…

  8. Performance of Higher National Diploma of Building Technology Graduates in the Construction Industry: A Tracer Study in Kumasi Metropolis, Ghana

    ERIC Educational Resources Information Center

    Awere, E.; Edu-Buandoh, K. B. M.; Dadzie, D. K.; Aboagye, J. A.

    2016-01-01

    Building Technology graduates from Ghanaian Polytechnics seek employment in the construction industry, yet little information is known as to whether their tertiary education is really related to and meeting the actual needs of their prospective employers in the construction industry. The tracer study was conducted to ascertain the performance of…

  9. Continuous field measurement of N2O isotopologues using FTIR spectroscopy following 15N addition

    NASA Astrophysics Data System (ADS)

    Phillips, R. L.; Griffith, D. W.; Dijkstra, F. A.; Lugg, G.; Lawrie, R.; Macdonald, B.

    2012-12-01

    Anthropogenic additions of fertilizer nitrogen (N) have significantly increased the mole fraction of nitrous oxide (N2O) in the troposphere. Tracking the fate of fertilizer N and its transformation to N2O is important to advance knowledge of greenhouse gas emissions from soils. Transport and transformations are frequently studied using 15N labeling experiments, but instruments capable of continuous measurements of 15N-N2O at the surface of soil have only recently come to the fore. Our primary aim was to quantify emissions of N2O and the fraction of 15N emitted as N2O from an agricultural soil following 15N addition using a mobile Fourier Transform Infrared (FTIR) spectrometer. We set up a short-term field experiment on a coastal floodplain site near Nowra, New South Wales. We deployed an automated chamber system connected to a multi-pass cell (optical pathlength 24 m) and low resolution FTIR spectrometer to measure fluxes of all N2O isotopologues collected from five 0.25 m2 chambers every three hours. We measured N2O fluxes pre and post-application of 15N-labeled substrate as potassium nitrate (KNO3) or urea [CO(NH2)2] to the soil surface. Root mean square uncertainties for all isotopologue measurements were less than 0.3 nmol mol-1 for 1 minute average concentration measurements, and minimum detectable fluxes for each isotopologue were <0.1 ng N m-2 s-1. Emissions of all N2O isotopologues were evident immediately following 15N addition. Emissions of 14N15NO, 15N14NO and 15N15NO isotopologues subsided within 10 d, but 14N14NO fluxes were evident over the entire experiment. The figure provides an overview of the emissions. Cumulative 15N-N2O fluxes (sum of the three 15N isotopologues) per chamber for the 14 days following 15N addition ranged from 1.5 to 10.3 mg 15N-N2O m-2. The chambers were destructively sampled after 2 weeks and 15N analyzed in soil and plant material using isotope ratio mass spectrometry. Approximately 1% (range 0.7 - 1.9%) of the total amount of

  10. Influence of open ocean nitrogen supply on the skeletal δ15N of modern shallow-water scleractinian corals

    NASA Astrophysics Data System (ADS)

    Wang, Xingchen T.; Sigman, Daniel M.; Cohen, Anne L.; Sinclair, Daniel J.; Sherrell, Robert M.; Cobb, Kim M.; Erler, Dirk V.; Stolarski, Jarosław; Kitahara, Marcelo V.; Ren, Haojia

    2016-05-01

    The isotopic composition of skeleton-bound organic nitrogen in shallow-water scleractinian corals (hereafter, CS-δ15N) is an emerging tool for studying the marine nitrogen cycle in the past. The CS-δ15N has been shown to reflect the δ15N of nitrogen (N) sources to corals, with most applications to date focusing on the anthropogenic/terrestrial N inputs to reef environments. However, many coral reefs receive their primary N sources from the open ocean, and the CS-δ15N of these corals may provide information on past changes in the open ocean regional and global N cycle. Using a recently developed persulfate/denitrifier-based method, we measured CS-δ15N in modern shallow-water scleractinian corals from 8 sites proximal to the open ocean. At sites with low open ocean surface nitrate concentrations typical of the subtropics and tropics, measured CS-δ15N variation on seasonal and annual timescales is most often less than 2‰. In contrast, a broad range in CS-δ15N (of ∼10‰) is measured across these sites, with a strong correlation between CS-δ15N and the δ15N of the deep nitrate supply to the surface waters near the reefs. While CS-δ15N can be affected by other N sources as well and can vary in response to local reef conditions as well as coral/symbiont physiological changes, this survey indicates that, when considering corals proximal to the open ocean, the δ15N of the subsurface nitrate supply to surface waters drives most of the CS-δ15N variation across the global ocean. Thus, CS-δ15N is a promising proxy for reconstructing the open ocean N cycle in the past.

  11. Eastern oyster (Crassostrea virginica) δ15N as a bioindicator of nitrogen sources: Observations and modeling

    PubMed Central

    Fertig, B.; Carruthers, T.J.B.; Dennison, W.C.; Fertig, E.J.; Altabet, M.A.

    2013-01-01

    Stable nitrogen isotopes (δ15N) in bioindicators are increasingly employed to identify nitrogen sources in many ecosystems and biological characteristics of the eastern oyster (Crassostrea virginica) make it an appropriate species for this purpose. To assess nitrogen isotopic fractionation associated with assimilation and baseline variations in oyster mantle, gill, and muscle tissue δ15N, manipulative fieldwork in Chesapeake Bay and corresponding modeling exercises were conducted. This study (1) determined that five individuals represented an optimal sample size; (2) verified that δ15N in oysters from two locations converged after shared deployment to a new location reflecting a change in nitrogen sources; (3) identified required exposure time and temporal integration (four months for muscle, two to three months for gill and mantle); and (4) demonstrated seasonal δ15N increases in seston (summer) and oysters (winter). As bioindicators, oysters can be deployed for spatial interpolation of nitrogen sources, even in areas lacking extant populations. PMID:20381097

  12. Distribution of 15N-chlorocholine chloride in eggs of laying hens.

    PubMed

    Songsang, A; Chakeredza, S; Thinggaard, G; Vearasilp, T; ter Meulen, U

    2002-06-01

    The distribution of Chlorocholine chloride (CCC) in the eggs of laying hens was studied using 15N-CCC. Twelve layers (37 weeks old) were divided into four groups and used in this study consisting of three feeding phases. In phase one (7 days), all the hens received a CCC-free diet [165 g CP/kg dry matter (DM); 11.58 MJ ME/kg DM]. In phase two (11 days), four levels of 15N-CCC: 0, 5, 50 and 250 ppm were added to the respective diets, while in phase three (7 days), CCC-free feed was again offered. Egg samples were taken and the 15N content of egg yolk and albumin were determined. At the end of phase two, there was a significant (p < 0.05) increase in 15N content in egg yolk from hens fed the 50 and 250 ppm CCC diets and in albumin from hens fed the 250 ppm CCC diet. The estimated 15N-CCC residue was 1.71, 6.64, 28.80 ppm in egg yolk and 1.58, 1.08 and 4.50 ppm in albumin from hens fed 5, 50 and 250 ppm CCC, respectively. The CCC residue, from quantitative analysis ranged from 0.21 to 0.93 and 0.93 to 2.43 ppm in yolk of hens fed 50 and 250 ppm CCC, respectively, whereas a range of 0.40-1.46 ppm, was found in the albumin of hens fed 250 ppm. The difference in measured CCC in yolk and albumin and that estimated from 15N-CCC could have been due to breakdown products of 15N-CCC. Seven days after withdrawal of 15N-CCC, the estimated 15N-CCC residue in egg yolk decreased to 0.43, 2.45 and 15.59 ppm, on 5, 50 and 250 ppm CCC dietary treatments, respectively, and to 2.46 ppm in albumin from hens fed 250 ppm CCC. The higher increase in 15N content could have been due to a higher incorporation of 15N-CCC into yolk than albumin during the process of rapid yolk deposition. This experiment showed that consumed CCC is distributed both into yolk and albumin in a dose dependent manner and that CCC is metabolized in laying hens. However, the level of CCC in the diet which could lead to accumulation of detectable CCC levels in eggs as observed in this study, is much higher than the

  13. Post-translational heterocyclic backbone modifications in the 43-peptide antibiotic microcin B17. Structure elucidation and NMR study of a 13C,15N-labelled gyrase inhibitor.

    PubMed

    Bayer, A; Freund, S; Jung, G

    1995-12-01

    Microcin B17 (McB17), the first known gyrase inhibitor of peptidic nature, is produced by ribosomal synthesis and post-translational modification of the 69-residue precursor protein by an Escherichia coli strain. To elucidate the chemical structure of the mature 43-residue peptide antibiotic, fermentation and purification protocols were established and optimized which allowed the isolation and purification of substantial amounts of highly pure McB17 (non-labelled, 15N-labelled and 13C/15N-labelled peptide. By ultraviolet-absorption spectroscopy. HPLC-electrospray mass spectrometry and GC-mass spectrometry, amino acid analysis, protein sequencing, and, in particular, multidimensional NMR, we could demonstrate and unequivocally prove that the enzymic modification of the precursor backbone at Gly-Cys and Gly-Ser segments leads to the formation of 2-aminomethylthiazole-4-carboxylic acid and 2-aminomethyloxazole-4-carboxylic acid, respectively. In addition, two bicyclic modifications 2-(2-aminomethyloxazolyl)thiazole-4-carboxylic acid and 2-(2-aminomethylthiazolyl)oxazole-4-carboxylic acid were found that consist of directly linked thiazole and oxazole rings derived from one Gly-Ser-Cys and one Gly-Cys-Ser segment. Analogous to the thiazole and oxazole rings found in antitumor peptides of microbial and marine origin, these heteroaromatic ring systems of McB17 presumably play an important role in its gyrase-inhibiting activity, e.g. interacting with the DNA to trap the covalent protein-DNA intermediate of the breakage-reunion reaction of the gyrase.

  14. Nitrate removal in stream ecosystems measured by 15N addition experiments: 2. Denitrification

    SciTech Connect

    Mulholland, Patrick J; Hall, Robert; Sobota, Daniel; Dodds, Walter; Findlay, Stuart; Grimm, Nancy; Hamilton, Stephen; McDowell, William; O'Brien, Jon; Tank, Jennifer; Ashkenas, Linda; Cooper, Lee W; Dahm, Cliff; Gregory, Stanley; Johnson, Sherri; Meyer, Judy; Peterson, Bruce; Poole, Geoff; Valett, H. Maurice; Webster, Jackson; Arango, Clay; Beaulieu, Jake; Bernot, Melody; Burgin, Amy; Crenshaw, Chelsea; Helton, Ashley; Johnson, Laura; Niederlehner, Bobbie; Potter, Jody; Sheibley, Rich; Thomas, Suzanne

    2009-01-01

    We measured denitrification rates using a field {sup 15}N-NO{sub 3}{sup -} tracer-addition approach in a large, cross-site study of nitrate uptake in reference, agricultural, and suburban-urban streams. We measured denitrification rates in 49 of 72 streams studied. Uptake length due to denitrification (S{sub Wden}) ranged from 89 m to 184 km (median of 9050 m) and there were no significant differences among regions or land-use categories, likely because of the wide range of conditions within each region and land use. N{sub 2} production rates far exceeded N{sub 2}O production rates in all streams. The fraction of total NO{sub 3}{sup -} removal from water due to denitrification ranged from 0.5% to 100% among streams (median of 16%), and was related to NH{sub 4}{sup +} concentration and ecosystem respiration rate (ER). Multivariate approaches showed that the most important factors controlling S{sub Wden} were specific discharge (discharge/width) and NO{sub 3}{sup -} concentration (positive effects), and ER and transient storage zones (negative effects). The relationship between areal denitrification rate (U{sub den}) and NO{sub 3}{sup -} concentration indicated a partial saturation effect. A power function with an exponent of 0.5 described this relationship better than a Michaelis-Menten equation. Although U{sub den} increased with increasing NO{sub 3}{sup -} concentration, the efficiency of NO{sub 3}{sup -} removal from water via denitrification declined, resulting in a smaller proportion of streamwater NO{sub 3}{sup -} load removed over a given length of stream. Regional differences in stream denitrification rates were small relative to the proximate factors of NO{sub 3}{sup -} concentration and ecosystem respiration rate, and land use was an important but indirect control on denitrification in streams, primarily via its effect on NO{sub 3}{sup -} concentration.

  15. Nitrate removal in stream ecosystems measured by 15N addition experiments: Denitrification

    USGS Publications Warehouse

    Mulholland, P.J.; Hall, R.O.; Sobota, D.J.; Dodds, W.K.; Findlay, S.E.G.; Grimm, N. B.; Hamilton, S.K.; McDowell, W.H.; O'Brien, J. M.; Tank, J.L.; Ashkenas, L.R.; Cooper, L.W.; Dahm, Clifford N.; Gregory, S.V.; Johnson, S.L.; Meyer, J.L.; Peterson, B.J.; Poole, G.C.; Valett, H.M.; Webster, J.R.; Arango, C.P.; Beaulieu, J.J.; Bernot, M.J.; Burgin, A.J.; Crenshaw, C.L.; Helton, A.M.; Johnson, L.T.; Niederlehner, B.R.; Potter, J.D.; Sheibley, R.W.; Thomasn, S.M.

    2009-01-01

    We measured denitrification rates using a field 15N-NO- 3 tracer-addition approach in a large, cross-site study of nitrate uptake in reference, agricultural, and suburban-urban streams. We measured denitrification rates in 49 of 72 streams studied. Uptake length due to denitrification (SWden) ranged from 89 m to 184 km (median of 9050 m) and there were no significant differences among regions or land-use categories, likely because of the wide range of conditions within each region and land use. N2 production rates far exceeded N2O production rates in all streams. The fraction of total NO-3 removal from water due to denitrification ranged from 0.5% to 100% among streams (median of 16%), and was related to NHz 4 concentration and ecosystem respiration rate (ER). Multivariate approaches showed that the most important factors controlling SWden were specific discharge (discharge / width) and NO-3 concentration (positive effects), and ER and transient storage zones (negative effects). The relationship between areal denitrification rate (Uden) and NO- 3 concentration indicated a partial saturation effect. A power function with an exponent of 0.5 described this relationship better than a Michaelis-Menten equation. Although Uden increased with increasing NO- 3 concentration, the efficiency of NO-3 removal from water via denitrification declined, resulting in a smaller proportion of streamwater NO-3 load removed over a given length of stream. Regional differences in stream denitrification rates were small relative to the proximate factors of NO-3 concentration and ecosystem respiration rate, and land use was an important but indirect control on denitrification in streams, primarily via its effect on NO-3 concentration. ?? 2009.

  16. A pilot study of the behavior of gas- and particle-phase ETS tracers in residences

    SciTech Connect

    Apte, Michael; Gundel, Lara; Dod, Raymond; Chang, Gee-Min; Sextro, Richard

    2002-02-01

    Our previous study of environmental tobacco smoke (ETS) in a three-room environmental chamber showed that smoking history significantly influenced inter-room ETS transport, particularly of gas-phase nicotine. We conducted a three-home pilot study where smoking was limited to one room. Single-smoker residences were monitored during five one-week periods while the smoker participated in a smoking cessation program. Nicotine traced ETS particles were detected reliably in the smoking rooms (SRs) and unreliably in the non-smoking rooms (NSRs). On average, the ventilation- and volume-normalized smoking rate, 0.1 Cigarette-h{sup -1} m{sup -3}, added about 17 and 4 {micro}g m{sup -3} of ETS particles into the SR and NSR, while average nicotine concentration increases were 2 and 0.06 {micro}g m{sup -3}, respectively. Thus, nicotine tracers may underestimate ETS particle exposure in a NSR (e.g., a child's bedroom) by a factor of 2 to 8. In other words, ETS exposure predicted from nicotine concentrations could be almost an order of magnitude lower than actual exposure.

  17. Green River air quality model development: meteorological and tracer data, July/August 1982 field study in Brush Valley, Colorado

    SciTech Connect

    Whiteman, C.D.; Lee, R.N.; Orgill, M.M.; Zak, B.D.

    1984-06-01

    Meteorological and atmospheric tracer studies were conducted during a 3-week period in July and August of 1982 in the Brush Creek Valley of northwestern Colorado. The objective of the field experiments was to obtain data to evaluate a model, called VALMET, developed at PNL to predict dispersion of air pollutants released from an elevated stack located within a deep mountain valley in the post-sunrise temperature inversion breakup period. Three tracer experiments were conducted in the valley during the 2-week period. In these experiments, sulfur hexafluoride (SF/sub 6/) was released from a height of approximately 100 m, beginning before sunrise and continuing until the nocturnal down-valley winds reversed several hours after sunrise. Dispersion of the sulfur hexafluoride after release was evaluated by measuring SF/sub 6/ concentrations in ambient air samples taken from sampling devices operated within the valley up to about 8 km down valley from the source. An instrumented research aircraft was also used to measure concentrations in and above the valley. Tracer samples were collected using a network of radio-controlled bag sampling stations, two manually operated gas chromatographs, a continuous SF/sub 6/ monitor, and a vertical SF/sub 6/ profiler. In addition, basic meteorological data were collected during the tracer experiments. Frequent profiles of vertical wind and temperature structure were obtained with tethered balloons operated at the release site and at a site 7.7 km down the valley from the release site. 10 references, 63 figures, 50 tables.

  18. Diatoms as a tracer of hydrological connectivity: the Oak Creek case study (Oregon, USA)

    NASA Astrophysics Data System (ADS)

    Antonelli, Marta; Martínez-Carreras, Nuria; Frentress, Jay; Pfister, Laurent

    2015-04-01

    The vast heterogeneity and complexity of rainfall-runoff transformation processes expresses itself in a multitude of water sources and flowpaths - ultimately resulting in the well-known intricacy of hydrological connectivity. Pioneering work of Pfister et al. (2009) conducted in the Weierbach catchment (0.45 km2, NW Luxembourg, semi-oceanic climate) demonstrated the potential for diatoms (unicellular, eukaryotic algae) to be used as a tracer of hydrological connectivity. Diatoms originating from terrestrial habitats had been shown to be systematically flushed from the riparian areas into the stream during storm events. Here, we present a study conducted in the Oak Creek(0.17 km2, Oregon, Mediterranean climate), characterised by a large riparian area. Our first working hypothesis (H1) stipulates that diatoms are an ubiquitous tracer of fast hydrological flowpaths. The second hypothesis (H2) states that the riparian area is the major reservoir of terrestrial diatoms that contributes to the flushing process during rainfall events. A winter rainfall-runoff event was monitored in March 2012. Diatom samples were collected from soil, moss, epipelon and streamwater in order to characterise the communities along the hillslope-riparian-stream (HRS) continuum. Diatoms in each sample were also assigned to different wetness categories (according to Van Dam et al., 1994). The catchment was instrumented with an ISCO automatic streamwater sampler and the samples were analysed for conductivity, 18O, 2H, chemical elements and presence/abundance of diatoms belonging to different wetness categories. Our results show that the percentage of diatom species originating from habitats located outside of the stream evolves along the rising and falling limbs of the hydrograph. This observation confirms the event-related flushing of diatoms from terrestrial habitats to the stream and, consequently, the potential for diatoms to be used for the detection of hydrological connectivity in the

  19. The First in Vivo Observation of 13C- 15N Coupling in Mammalian Brain

    NASA Astrophysics Data System (ADS)

    Kanamori, Keiko; Ross, Brian D.

    2001-12-01

    [5-13C,15N]Glutamine, with 1J(13C-15N) of 16 Hz, was observed in vivo in the brain of spontaneously breathing rats by 13C MRS at 4.7 T. The brain [5-13C]glutamine peak consisted of the doublet from [5-13C,15N]glutamine and the center [5-13C,14N]glutamine peak, resulting in an apparent triplet with a separation of 8 Hz. The time course of formation of brain [5-13C,15N]glutamine was monitored in vivo with a time resolution of 20-35 min. This [5-13C,15N]glutamine was formed by glial uptake of released neurotransmitter [5-13C]glutamate and its reaction with 15NH3 catalyzed by the glia-specific glutamine synthetase. The neurotransmitter glutamate C5 was selectively13C-enriched by intravenous [2,5-13C]glucose infusion to 13C-label whole-brain glutamate C5, followed by [12C]glucose infusion to chase 13C from the small and rapidly turning-over glial glutamate pool, leaving 13C mainly in the neurotransmitter [5-13C]glutamate pool, which is sequestered in vesicles until release. Hence, the observed [5-13C,15N]glutamine arises from a coupling between 13C of neuronal origin and 15N of glial origin. Measurement of the rate of brain [5-13C,15N]glutamine formation provides a novel noninvasive method of studying the kinetics of neurotransmitter uptake into glia in vivo, a process that is crucial for protecting the brain from glutamate excitotoxicity.

  20. Ecosystem N distribution and δ15N during a century of forest regrowth after agricultural abandonment

    USGS Publications Warehouse

    Compton, J.E.; Hooker, T.D.; Perakis, S.S.

    2007-01-01

    Stable isotope ratios of terrestrial ecosystem nitrogen (N) pools reflect internal processes and input–output balances. Disturbance generally increases N cycling and loss, yet few studies have examined ecosystem δ15N over a disturbance-recovery sequence. We used a chronosequence approach to examine N distribution and δ15N during forest regrowth after agricultural abandonment. Site ages ranged from 10 to 115 years, with similar soils, climate, land-use history, and overstory vegetation (white pine Pinus strobus). Foliar N and δ15N decreased as stands aged, consistent with a progressive tightening of the N cycle during forest regrowth on agricultural lands. Over time, foliar δ15N became more negative, indicating increased fractionation along the mineralization–mycorrhizal–plant uptake pathway. Total ecosystem N was constant across the chronosequence, but substantial internal N redistribution occurred from the mineral soil to plants and litter over 115 years (>25% of ecosystem N or 1,610 kg ha−1). Temporal trends in soil δ15N generally reflected a redistribution of depleted N from the mineral soil to the developing O horizon. Although plants and soil δ15N are coupled over millennial time scales of ecosystem development, our observed divergence between plants and soil suggests that they can be uncoupled during the disturbance-regrowth sequence. The approximate 2‰ decrease in ecosystem δ15N over the century scale suggests significant incorporation of atmospheric N, which was not detected by traditional ecosystem N accounting. Consideration of temporal trends and disturbance legacies can improve our understanding of the influence of broader factors such as climate or N deposition on ecosystem N balances and δ15N.

  1. A simulation study on superparamagnetic nanoparticle based multi-tracer tracking

    NASA Astrophysics Data System (ADS)

    Wu, Kai; Batra, Akash; Jain, Shray; Ye, Clark; Liu, Jinming; Wang, Jian-Ping

    2015-10-01

    Superparamagnetic nanoparticles (MNPs) have been utilized in biomedical sensing, detection, therapeutics, and diagnostics due to their unique magnetic response under different driving fields. In this letter, we report a multi-tracer tracking method that uses different kinds of MNPs as magnetic tracers along with two alternating magnetic fields that can be potentially used to build magnetic-based flow cytometry. By applying two driving fields at frequency f H and f L to MNPs, the response signal is measured at the combinatorial frequencies such as f H ± 2 f L (3rd harmonics), f H ± 4 f L (5th harmonics), f H ± 6 f L (7th harmonics), and so on. Each MNP has its own signature of phase and amplitude, and it is possible to differentiate individual MNPs in a mixture. We theoretically demonstrated colorizing up to 4-MNP tracers in one mixture with an error rate lower than 10%. The performance of multi-tracer imaging can be optimized by increasing the driving field frequency, choosing MNPs with higher saturation magnetization, and using MNP tracers with more centralized size distribution.

  2. Use of /sup 15/N to measure nitrogen uptake in eutrophic oceans; experimental considerations

    SciTech Connect

    Not Available

    1986-07-01

    The use of /sup 15/N to measure the flux of nitrogen compounds has become increasingly popular as the techniques and instrumentation for stable isotope analysis have become more widely available. Questions concerning equations for calculating uptake, effect of isotope dilution (in the case of ammonium), duration of incubation, and relationship between disappearance of a nitrogen compound and the /sup 15/N uptake measurement have arisen, especially for the research conducted in oligotrophic regions. Fewer problems seem to have occurred ineutrophic areas. However, sufficient literature now exists to allow some generally accepted experimental procedures for /sup 15/N studies in eutrophic regions to be laid down. Incubation periods of 2-6 h appear to avoid problems related to isotope dilution and to overcome the bias introduced in some cases by initial high rate or surge uptake. During such incubation periods, assimilation is measured rather than uptake or transport into the cell. Incorporation of /sup 15/N into the particulate fraction is usually linear with time over the periods currently used. The /sup 15/N method provides a better estimate of incorporation into phytoplankton than /sup 14/N disappearance, but a small fraction appears to be lost. Although most workers suggest the loss to be a result of dissolved organic nitrogen production, direct evidence is lacking. If the considerations discussed here are applied with the /sup 15/N techniques currently available, reliable estimates of phytoplankton nitrogen flux in eutrophic areas can be obtained.

  3. Identification and characterization of conservative organic tracers for use as hydrologic tracers for the Yucca Mountain Site characterization study; Progress report, April 1, 1993--June 30, 1993

    SciTech Connect

    Dombrowski, T.; Stetzenbach, K.

    1993-08-01

    This report is in two parts one for the fluorinated benzoic acids and one for the fluorinated aliphatic acids. The assumptions made in the report regarding the amount of tracer that will be used, dilution of the tracer during the test and the length of exposure (if any) to individuals drinking the water were made by the authors. These assumptions must really come from the USGS hydrologists in charge of the c-well tracer testing program. Accurate estimates of dilution of the tracer during the test are also important because of solubility limitations of some of the tracers. Three of the difluorobenzoic acids have relatively low solubilities and may not be usable if the dilution estimates are large. The toxicologist that reviewed the document agreed with our conclusion that the fluorinated benzoic and toluic acids do not represent a health hazard if used under the conditions as outlined in the report. We are currently testing 15 of these compounds, and if even if three difluorobenzoic acids cannot be used because of solubility limitations we will still have 12 tracers. The toxicologist felt that the aliphatic fluorinated acids potentially present more of a health risk than the aromatic. This assessment was based on the fact of a known allergic response to halothane anesthetic. This risk, although minimal, is known and he felt that was enough reason to recommend against their use. The authors feel that the toxicologists interpretation of this risk was overly conservative, however, we will not go against his recommendation at this time for the following reasons. First, without the aliphatic compounds we still have 12 to 15 fluorinated aromatic acids which, should be enough for the c-well tests. Second, to get a permit to use aliphatic compounds would undoubtedly require a hearing which could be quite lengthy.

  4. Identification and characterization of conservative organic tracers for use as hydrologic tracers for the Yucca Mountain site characterization study. Final report

    SciTech Connect

    Stetzenbach, K.; Farnham, I.

    1996-06-01

    Extensive tracer testing is expected to take place at the C-well complex in the Nevada Test Site as part of the Yucca Mountain Site Characterization Project. The C-well complex consists of one pumping well, C3, and two injection wells, C1 and C2 into which tracer will be introduced. The goal of this research was to provide USGS with numerous tracers to completed these tests. Several classes of fluorinated organic acids have been evaluated. These include numerous isomers of fluorinated benzoic acids, cinnamic acids, and salicylic acids. Also several derivatives of 2-hydroxy nicotinic acid (pyridone) have been tested. The stability of these compounds was determined using batch and column tests. Ames testing (mutagenicity/carcinogenicity) was conducted on the fluorinated benzoic acids and a literature review of toxicity of the fluorobenzoates and three perfluoro aliphatic acids was prepared. Solubilities were measured and method development work was performed to optimize the detection of these compounds. A Quality Assurance (QA) Program was developed under existing DOE and USGS guidelines. The program includes QA procedures and technical standard operating procedures. A tracer test, using sodium iodide, was performed at the C-well complex. HRC chemists performed analyses on site, to provide real time data for the USGS hydrologists and in the laboratories at UNLV. Over 2,500 analyses were performed. This report provides the results of the laboratory experiments and literature reviews used to evaluate the potential tracers and reports on the results of the iodide C-well tracer test.

  5. Terrestrial inert gases - Isotope tracer studies and clues to primordial components in the mantle

    NASA Astrophysics Data System (ADS)

    Lupton, J. E.

    The use of He-3/He-4 measurements for characterizing terrestrial materials and tracing natural-system processes is surveyed. Terrestrial He is classified according to its He-3/He-4 ratio, expressed as R/R-A where R-A is the He-3/He-4 ratio of atmospheric He, 1.4 x 10 to the -6th; radiogenic He typical of continental rocks has R/R-A of 0.01-0.1, while mantle He, typical of midoceanic ridge basalts (MORB) and other geothermal environments and attributed to gas entrapment during the earth's formation, has R/R-A of 5-30. Determinations of R/R-A for MORB and for samples from hot spots, from Tristan da Cunha, and from subduction zones are compared with Sr, Nd, Ar, Ne, and Xe data and shown to support a two-layer (depleted/fertile) model of the mantle, with mixing processes accounting for tectonic variations in R/R-A. The use of He-3 as a tracer for mapping ocean circulation patterns, studying ridge-crest tectonic and hydrothermal processes, and geothermal and hydrologic prospecting is described.

  6. Tracer-based quantification of individual frac discharge in single-well multiple-frac backflow: sensitivity study

    NASA Astrophysics Data System (ADS)

    Ghergut, Julia; Behrens, Horst; Sauter, Martin

    2014-05-01

    Within the deep-geothermal research project at GroßSchönebeck in the NE German Basin, targeting volcanic rocks (Lower Rotliegend) and siliciclastics (Upper Rotliegend) in the Lower Permian by means of a well doublet with several screening intervals between 3815 and 4247 m b.s.l., several artificial fractures with different geometric and hydraulic characteristics were created at each well, aiming to increase reservoir performance [1], [2]. It could not be told a priori which of the various fracturing treatments was to prove as most promising in terms of future reservoir productivity. At the intended-production well (GS-4), one large-area waterfrac was created in the low-permeability volcanic rocks, and two gel-proppant fractures in selected sandstone layers. Each fracturing treatment was accompanied by the injection of a water-dissolved tracer slug, followed by a defined volume of tracer-free ('chaser') fluid [3]. Each frac received a different species of a sulfonated aromatic acid salt, as a conservative water tracer. During subsequent backflow tests (either gas-based lifting, or production by means of a downhole submersible pump), each frac can contribute a certain (more or less constant) amount to the measured total discharge (also depending on whether and when each frac 'starts' contributing, and which effective aperture and area it actually 'manifests' during the process). Since these individual-frac discharge amounts cannot be measured directly, it was endeavoured to indirectly determine ('resolve') them from tracer signals as detectable in the overall backflow discharge. Therefore, we need to examine how these tracer signals depend on local discharge values and on local hydrogeologic parameters (matrix porosity, permeability distribution; frac transmissivity, thickness, effective area and aperture), and to what extent hydrogeological uncertainty will impede the inversion of local discharge values. To this end, a parameter sensitivity study was conducted on

  7. Feasibility Study of Non-Radioactive Tracers for Monitoring Injected Water in Oil Reservoirs

    NASA Astrophysics Data System (ADS)

    Sawamura, H.; Nishimura, K.; Mituishi, H.; Muta, T.; Schweitzer, J. S.

    This paper discusses the results of analyses conducted on non-radioactive tracers that can be used in combination with the sea water injected into a well for monitoring the water permeating through the oil reservoir by a nuclear logging tool utilizing a pulsed neutron generator. The model of the pulsed neutron tool is constructed to permit Monte Carlo Simulations to be performed of the tool response to the presence of non-radioactive tracers to achieve a desirable level of the neutron absorbing cross sections in the sea water injected into and permeating through the oil reservoirs. Sensitivity analyses of the tool response of the nuclear logging tool were performed for two types of non-radioactive tracers, ammonium tetraborate and gadolinium chloride.

  8. The use of air as a natural tracer infractured hydrothermal systems, Los Azufres, Mexico, case study

    SciTech Connect

    Mario Cesar Sudrez Arriaga; Hector Gutierrez Puente, Josefina Moreno Ochoa

    1991-01-01

    Injection of atmospheric air mixed with cold water has been occurring since 1982 at the Los Azufres geothermal field. Several chemical and thermodynamical evidences show that air injection into this fractured hydrothermal system could be considered as a long term natural tracer test. Nitrogen and Argon separated from the air mixture migrate, under the action of the induced injection-extraction gradient, from reinjection sectors to production zones following preferential paths closely related to high permeability conduits. A coarse numerical estimation of the average permeability tensor existing at Tejamaniles, the southern sector, explains the unsuccessful recovery of the artificial tracer tests performed in past years: the anisotropic nature of the fractured volcanic rock would demand considerably quantities of tracer in order to be detected at the producing wells, especially when fluid extraction was low. At the same time concentrations of calcium, cesium, chloride, potassium, rubidium and sodium, are increasing in the liquid produced by the oldest wells of this field's sector.

  9. Metamorphic origin of ore-forming fluids for orogenic gold-bearing quartz vein systems in the North American Cordillera: constraints from a reconnaissance study of δ15N, δD, and δ18O

    USGS Publications Warehouse

    Jia, Y.; Kerrich, R.; Goldfarb, R.

    2003-01-01

    The western North American Cordillera hosts a large number of gold-bearing quartz vein systems from the Mother Lode of southern California, through counterparts in British Columbia and southeastern Alaska, to the Klondike district in central Yukon. These vein systems are structurally controlled by major fault zones, which are often reactivated terrane-bounding sutures that formed in orogens built during accretion and subduction of terranes along the continental margin of North America. Mineralization ages span mid-Jurassic to early Tertiary and encompass much of the evolution ofthe Cordilleran orogen. Nitrogen contents and ??15N values of hydrothermal micas from veins are between 130 and 3,500 ppm and 1.7 to 5.5 per mil, respectively. These values are consistent with fluids derived from metamorphic dehydration reactions within the Phanerozoic accretion-subduction complexes, which have ??15N values of 1 to 6 per mil. The ??18O values of gold-bearing vein quartz from different locations in the Cordillera are between 14.6 and 22.2 per mil but are uniform for individual vein systems. The ??D values of hydrothermal micas are between -110 and -60 per mil. Ore fluids have calculated ??18O values of 8 to 16 per mil and ??D values of -65 to -10 per mil at an estimated temperature of 300??C; ??D values of ore fluids do not show any latitudinal control. These results indicate a deep crustal source for the ore-forming fluids, most likely of metamorphic origin. Low ??DH2O values of -120 to -130 per mil for a hydrous muscovite from the Sheba vein in the Klondike district reflect secondary exchange between recrystallizing mica and meteoric waters. Collectively, the N, H, and O isotope compositions of ore-related hydrothermal minerals indicate that the formation of these gold-bearing veins involved dilute, aqueous carbonic, and nitrogen-bearing fluids that were generated from metamorphic dehydration reactions at deep crustal levels. These data are not consistent with either mantle

  10. Isotopic tracer studies of Fischer-Tropsch Synthesis over Ru/TiO{sub 2} catalysts

    SciTech Connect

    Krishna, K.R.

    1992-01-01

    Fischer-Tropsch synthesis is a process in which CO and H{sub 2} react to give predominantly liquid hydrocarbons. The reaction can be considered a special type of polymerization in which the monomer is produced in situ, and chain growth occurs by a sequence of independently repeated additions of the monomer to the growing chain. A investigation has been conducted to study the CO hydrogenation reaction in order to better understand catalyst deactivation and the elementary surface processes involved in chain growth. Isotopic tracers are used in conjunction with transient-response techniques in this study of Fischer-Tropsch synthesis over Ru/TiO{sub 2} catalysts. Experiments are conducted at a total pressure of 1 atmosphere, reaction temperatures of 453--498 K and D{sub 2}/CO (or H{sub 2}/CO) ratios of 2--5. Synthesis products are analyzed by gas chromatography or isotope-ratio gas chromatography-mass spectrometry. Rate constants for chain initiation, propagation and termination are evaluated under steady-state reaction conditions by using transients in isotopic composition. The activation energy for chain termination is much higher than that for propagation, accounting for the observed decrease in the chain growth parameter are also estimated. Coverages by reaction intermediates are also estimated. When small amounts of {sup 12}C-labelled ethylene are added to {sup 13}CO/H{sub 2} synthesis gas, ethylene acts as the sole chain initiator. Ethylene-derived carbon also accounts for 45% of the C{sub 1} monomer pool. 102 refs., 29 figs., 11 tabs.

  11. Isotopic tracer studies of Fischer-Tropsch Synthesis over Ru/TiO sub 2 catalysts

    SciTech Connect

    Krishna, K.R.

    1992-01-01

    Fischer-Tropsch synthesis is a process in which CO and H{sub 2} react to give predominantly liquid hydrocarbons. The reaction can be considered a special type of polymerization in which the monomer is produced in situ, and chain growth occurs by a sequence of independently repeated additions of the monomer to the growing chain. A investigation has been conducted to study the CO hydrogenation reaction in order to better understand catalyst deactivation and the elementary surface processes involved in chain growth. Isotopic tracers are used in conjunction with transient-response techniques in this study of Fischer-Tropsch synthesis over Ru/TiO{sub 2} catalysts. Experiments are conducted at a total pressure of 1 atmosphere, reaction temperatures of 453--498 K and D{sub 2}/CO (or H{sub 2}/CO) ratios of 2--5. Synthesis products are analyzed by gas chromatography or isotope-ratio gas chromatography-mass spectrometry. Rate constants for chain initiation, propagation and termination are evaluated under steady-state reaction conditions by using transients in isotopic composition. The activation energy for chain termination is much higher than that for propagation, accounting for the observed decrease in the chain growth parameter are also estimated. Coverages by reaction intermediates are also estimated. When small amounts of {sup 12}C-labelled ethylene are added to {sup 13}CO/H{sub 2} synthesis gas, ethylene acts as the sole chain initiator. Ethylene-derived carbon also accounts for 45% of the C{sub 1} monomer pool. 102 refs., 29 figs., 11 tabs.

  12. Inductively coupled plasma mass spectrometry for stable isotope metabolic tracer studies of living systems

    SciTech Connect

    Luong, E.

    1999-05-10

    This dissertation focuses on the development of methods for stable isotope metabolic tracer studies in living systems using inductively coupled plasma single and dual quadrupole mass spectrometers. Sub-nanogram per gram levels of molybdenum (Mo) from human blood plasma are isolated by the use of anion exchange alumina microcolumns. Million-fold more concentrated spectral and matrix interferences such as sodium, chloride, sulfate, phosphate, etc. in the blood constituents are removed from the analyte. The recovery of Mo from the alumina column is 82 {+-} 5% (n = 5). Isotope dilution inductively coupled plasma mass spectrometry (ID-ICP-MS) is utilized for the quantitative ultra-trace concentration determination of Mo in bovine and human blood samples. The average Mo concentration in reference bovine serum determined by this method is 10.2 {+-} 0.4 ng/g, while the certified value is 11.5 {+-} 1.1 ng/g (95% confidence interval). The Mo concentration of one pool of human blood plasma from two healthy male donors is 0.5 {+-} 0.1 ng/g. The inductively coupled plasma twin quadrupole mass spectrometer (ICP-TQMS) is used to measure the carbon isotope ratio from non-volatile organic compounds and bio-organic molecules to assess the ability as an alternative analytical method to gas chromatography combustion isotope ratio mass spectrometry (GC-combustion-IRMS). Trytophan, myoglobin, and {beta}-cyclodextrin are chosen for the study, initial observation of spectral interference of {sup 13}C{sup +} with {sup 12}C{sup 1}H{sup +} comes from the incomplete dissociation of myoglobin and/or {beta}-cyclodextrin.

  13. Sample site selection for tracer studies applying a unidirectional circulatory approach

    SciTech Connect

    Layman, D.K.; Wolfe, R.R.

    1987-08-01

    The optimal arterial or venous sites for infusion and sampling during isotopic tracer studies have not been established. This study determined the relationship of plasma and tissue enrichment (E) when isotopes were infused in an artery and sampled from a vein (av mode) or infused in a vein and sampled from an artery (va mode). Adult dogs were given primed constant infusions of (3-/sup 13/C)lactate, (1-/sup 13/C)leucine, and /sup 14/C-labeled bicarbonate. Simultaneous samples were drawn from the vena cava, aortic arch, and breath. Tissue samples were removed from skeletal muscle, liver, kidney, and gut. Breath samples were analyzed for /sup 14/CO/sub 2/ by liquid scintillation counting and plasma isotopic enrichments of (/sup 13/C)lactate, (/sup 13/C)leucine, and alpha-(/sup 13/C)ketoisocaproate (KIC) were determined by gas chromatography-mass spectrometry. By using the va mode, the plasma E for lactate and leucine were 30-40% above tissue E. The av mode provided an accurate reflection of tissue E for lactate, which equilibrates rapidly with tissues, and a reasonable estimate for leucine, which exchanges more slowly. The isotopic enrichment of plasma KIC more directly reflected tissue leucine E than did plasma leucine E, and KIC enrichment was insensitive to sampling site. We also evaluated theoretically a circulatory model that predicts venous isotopic enrichments when the va mode is used. We conclude that the av mode is optimal but that the problems arising from use of the va mode can be overcome by use of a metabolic product (i.e., KIC) or by calculation of venous specific activity with our circulatory mode.

  14. Many Paths to Skilled Employment: A Reverse Tracer Study of Seven Occupations in Colombia.

    ERIC Educational Resources Information Center

    Ziderman, Adrian; Horn, Robin

    1995-01-01

    Employs reverse tracer techniques to identify alternative training paths for selected skilled and semiskilled occupations in Colombia. Shows that workers pursue various alternative training paths to acquire essential occupational skills. Strong public intervention in training markets should be discouraged, as choices would be narrowed and the…

  15. Comparison of [11C]cocaine binding at tracer and pharmacological doses of baboon brain: A PET study

    SciTech Connect

    Volkow, N.D.; Fowler, J.S.; Logan, J.

    1994-05-01

    In vitro studies have shown that cocaine (C) binds to both high and low affinity sites on the dopamine transporter (DAT). We have previously characterized the binding of tracer doses of [{sup 11}C]cocaine (C*)to a high affinity site on the DAT. To assess if in vivo C also binds to low affinity sites we used PET to compare binding of tracer doses (17.8{plus_minus}12.2 {mu}g C) of C* to pharmacological doses (8 mg of C coadministered with C*). Sixteen paired studies were done to assess test/retest variability, specific versus non specific binding and to characterize binding profile. Dynamic scans were started immediately after injection of C* (5-8 mCi) for 50 min on the CTI-931 (6 x 6 x 6.5 mm FWHM). Time activity curves for tissue concentration and for unchanged tracer in plasma were used to calculate the transport constant between plasma and tissue (K1) and to obtain the distribution volume (DV). The ratio of the DV in striatum (ST) to that in cerebellum (CB) (which corresponds to Bmax/Kd-1) was used as model parameter. Peak brain uptake of C* was significantly higher for tracer than for pharmacological doses (0.041 versus 0.033 % dose/cc), as were the values for K1 (1.07{plus_minus}0.21 versus 0.68{plus_minus}0.26 (t=3.0 p<0.01)). Repeated measures were reproducible for tracer ({plus_minus}2%) and pharmacological doses of C* ({plus_minus}4%). Tracer dose C* showed highest binding and slowest clearance in ST which was reduced by C (0.5-2.0 mg/kg iv, -25 to -30%) and by drugs that inhibit DAT (2mg/kg nomifensine - 21%, 0.5 mg/kg methylphenidate -12%) and was increased by serotonin transporter inhibitors (5HT-Ti) (2 mg/kg citalopram +11%, 0.5 mg/kg fluoxetine +6%) and not changed by NE transporter inhibitors (0.5 mg/kg desipramine or 2 mg/kg tomoxetine). The increase with (5HT-Ti) may reflect neurotransmitter interactions or changes in bioavailability. At pharmacological doses C* showed homogeneous distribution and was not changed by C nor by any of the above drugs.

  16. Tracer testing for reservoir description

    SciTech Connect

    Brigham, W.E.; Abbaszadeh-Dehghani, M.

    1987-05-01

    When a reservoir is studied in detail for an EOR project, well-to-well tracers should be used as a tool to help understand the reservoir in a quantitative way. Tracers complement the more traditional reservoir evaluation tools. This paper discusses the concepts underlying tracer testing, the analysis methods used to produce quantitative results, and the meaning of these results in terms of conceptual picture of the reservoir. Some of the limitations of these analysis methods are discussed, along with ongoing research on tracer flow.

  17. Nuclear hyperfine and quadrupole tensor characterization of the nitrogen hydrogen bond donors to the semiquinone of the QB site in bacterial reaction centers: a combined X- and S-band (14,15)N ESEEM and DFT study.

    PubMed

    Taguchi, Alexander T; O'Malley, Patrick J; Wraight, Colin A; Dikanov, Sergei A

    2014-02-13

    The secondary quinone anion radical QB(-) (SQB) in reaction centers of Rhodobacter sphaeroides interacts with Nδ of His-L190 and Np (peptide nitrogen) of Gly-L225 involved in hydrogen bonds to the QB carbonyls. In this work, S-band (∼3.6 GHz) ESEEM was used with the aim of obtaining a complete characterization of the nuclear quadrupole interaction (nqi) tensors for both nitrogens by approaching the cancelation condition between the isotropic hyperfine coupling and (14)N Zeeman frequency at lower microwave frequencies than traditional X-band (9.5 GHz). By performing measurements at S-band, we found a dominating contribution of Nδ in the form of a zero-field nqi triplet at 0.55, 0.92, and 1.47 MHz, defining the quadrupole coupling constant K = e(2)qQ/4h = 0.4 MHz and associated asymmetry parameter η = 0.69. Estimates of the hyperfine interaction (hfi) tensors for Nδ and Np were obtained from simulations of 1D and 2D (14,15)N X-band and three-pulse (14)N S-band spectra with all nuclear tensors defined in the SQB g-tensor coordinate system. From simulations, we conclude that the contribution of Np to the S-band spectrum is suppressed by its strong nqi and weak isotropic hfi comparable to the level of hyperfine anisotropy, despite the near-cancelation condition for Np at S-band. The excellent agreement between our EPR simulations and DFT calculations of the nitrogen hfi and nqi tensors to SQB is promising for the future application of powder ESEEM to full tensor characterizations.

  18. Nuclear hyperfine and quadrupole tensor characterization of the nitrogen hydrogen bond donors to the semiquinone of the QB site in bacterial reaction centers: a combined X- and S-band (14,15)N ESEEM and DFT study.

    PubMed

    Taguchi, Alexander T; O'Malley, Patrick J; Wraight, Colin A; Dikanov, Sergei A

    2014-02-13

    The secondary quinone anion radical QB(-) (SQB) in reaction centers of Rhodobacter sphaeroides interacts with Nδ of His-L190 and Np (peptide nitrogen) of Gly-L225 involved in hydrogen bonds to the QB carbonyls. In this work, S-band (∼3.6 GHz) ESEEM was used with the aim of obtaining a complete characterization of the nuclear quadrupole interaction (nqi) tensors for both nitrogens by approaching the cancelation condition between the isotropic hyperfine coupling and (14)N Zeeman frequency at lower microwave frequencies than traditional X-band (9.5 GHz). By performing measurements at S-band, we found a dominating contribution of Nδ in the form of a zero-field nqi triplet at 0.55, 0.92, and 1.47 MHz, defining the quadrupole coupling constant K = e(2)qQ/4h = 0.4 MHz and associated asymmetry parameter η = 0.69. Estimates of the hyperfine interaction (hfi) tensors for Nδ and Np were obtained from simulations of 1D and 2D (14,15)N X-band and three-pulse (14)N S-band spectra with all nuclear tensors defined in the SQB g-tensor coordinate system. From simulations, we conclude that the contribution of Np to the S-band spectrum is suppressed by its strong nqi and weak isotropic hfi comparable to the level of hyperfine anisotropy, despite the near-cancelation condition for Np at S-band. The excellent agreement between our EPR simulations and DFT calculations of the nitrogen hfi and nqi tensors to SQB is promising for the future application of powder ESEEM to full tensor characterizations. PMID:24437652

  19. Effect of Error Propagation in Stable Isotope Tracer Studies: An Approach for Estimating Impact on Apparent Biochemical Flux.

    PubMed

    Previs, Stephen F; Herath, Kithsiri; Castro-Perez, Jose; Mahsut, Ablatt; Zhou, Haihong; McLaren, David G; Shah, Vinit; Rohm, Rory J; Stout, Steven J; Zhong, Wendy; Wang, Sheng-Ping; Johns, Douglas G; Hubbard, Brian K; Cleary, Michele A; Roddy, Thomas P

    2015-01-01

    Stable isotope tracers are widely used to quantify metabolic rates, and yet a limited number of studies have considered the impact of analytical error on estimates of flux. For example, when estimating the contribution of de novo lipogenesis, one typically measures a minimum of four isotope ratios, i.e., the precursor and product labeling pre- and posttracer administration. This seemingly simple problem has 1 correct solution and 80 erroneous outcomes. In this report, we outline a methodology for evaluating the effect of error propagation on apparent physiological endpoints. We demonstrate examples of how to evaluate the influence of analytical error in case studies concerning lipid and protein synthesis; we have focused on (2)H2O as a tracer and contrast different mass spectrometry platforms including GC-quadrupole-MS, GC-pyrolysis-IRMS, LC-quadrupole-MS, and high-resolution FT-ICR-MS. The method outlined herein can be used to determine how to minimize variations in the apparent biology by altering the dose and/or the type of tracer. Likewise, one can facilitate biological studies by estimating the reduction in the noise of an outcome that is expected for a given increase in the number of replicate injections. PMID:26358910

  20. 40K-40Ca systematics as a Tracer of Silicate Weathering: A Himalayan case study

    NASA Astrophysics Data System (ADS)

    Davenport, Jesse; Caro, Guillaume; France-Lanord, Christian

    2015-04-01

    This study investigates the use of the 40K-40Ca system as a tracer to better quantify the contributions of silicate and carbonate lithologies in the dissolved load of major Himalayan rivers. Previous work using Sr isotopes as a proxy for silicate weathering has been complicated by the redistribution of radiogenic 87Sr between silicate and carbonate lithologies, particularly in the Lesser Himalaya, where dolomites exhibit 87Sr/86Sr ratios as high as 0.85. The 40Ca signature of carbonates, on the other hand, appears to be remarkably resistant to metamorphism and dolomitization [1]. It was therefore anticipated that the 40K-40Ca system could circumvent issues associated with such secondary events, and yield more robust constraints on the relative contribution of silicate vs. carbonate lithologies in dissolved river loads. The main difficulty in applying the 40K-40Ca decay scheme as a tracer lies in the analytical precision required to measure small variations (~1 ɛ-unit) on the large 40Ca isotope (96.9%). This difficulty can now be overcome using the Finnigan Triton TIMS, which allows measurements of the 40Ca/44Ca ratio with external precision of 0.35 ɛ-unit in multidynamic mode. Using this method, we generated high-precision 40Ca data on carbonates/dolomites, bedload sediments, dissolved load, and clay samples originating from and representing the main litho-tectonic units of the Himalaya. Our results show that metamorphosed dolomites from the Lesser Himalaya (LH) exhibit no radiogenic 40Ca excess despite highly variable 87Sr/86Sr signatures (0.73-0.85). Thus, all Himalayan carbonates appear to be characterized by a homogeneous ɛ40Ca=0. In contrast, silicate material is radiogenic, with ɛ40Ca averaging +1 in the Tethyan Sedimentary Series (TSS), +1.6 in the High Himalaya crystalline (HHC) and +4 ɛ-units in the LH. Results obtained from a series of 35 Himalayan rivers (including the Brahmaputra, Ganga and its main tributaries) show that ɛ40Ca in the

  1. You are not always what we think you eat. Selective assimilation across multiple whole-stream isotopic tracer studies

    SciTech Connect

    Dodds, W. K.; Collins, S. M.; Hamilton, S. K.; Tank, J. L.; Johnson, S.; Webster, J. R.; Simon, K. S.; Whiles, M. R.; Rantala, H. M.; McDowell, W. H.; Peterson, S. D.; Riis, T.; Crenshaw, C. L.; Thomas, S. A.; Kristensen, P. B.; Cheever, B. M.; Flecker, A. S.; Griffiths, N. A.; Crowl, T.; Rosi-Marshall, E. J.; El-Sabaawi, R.; Martí, E.

    2014-10-01

    Analyses of 21 15N stable isotope tracer experiments, designed to examine food web dynamics in streams around the world, indicated that the isotopic composition of food resources assimilated by primary consumers (mostly invertebrates) poorly reflected the presumed food sources. Modeling indicated that consumers assimilated only 33–50% of the N available in sampled food sources such as decomposing leaves, epilithon, and fine particulate detritus over feeding periods of weeks or more. Thus, common methods of sampling food sources consumed by animals in streams do not sufficiently reflect the pool of N they assimilate. Lastly, Isotope tracer studies, combined with modeling and food separation techniques, can improve estimation of N pools in food sources that are assimilated by consumers.

  2. Analysing fluorobenzoate tracers in groundwater samples using liquid chromatography-tandem mass spectrometry. A tool for leaching studies and hydrology.

    PubMed

    Juhler, René K; Mortensen, Annette P

    2002-05-24

    A sensitive LC-MS-MS method for the direct determination and quantification of 15 fluorobenzoic acids (FBAs) was developed. FBAs are used as conservative tracers for hydrological modelling of water flow and in studies of pesticides and other xenobiotic compounds. The use of FBAs is discussed in relation to other tracers (bromide, chloride, uranine). The method covers mono-substituted fluorobenzoic acid, difluorobenzoic acid, trifluorobenzoic acid, and tetrafluorobenzoic acid. The general detection limit in ground water was 1 microg/l using electrospray ionisation and 20 microg/l using atmospheric pressure chemical ionisation. Analysis time was less than 10 min, small sample volumes were needed and no clean-up was required.

  3. The 15N isotope to evaluate fertilizer nitrogen absorption efficiency by the coffee plant.

    PubMed

    Fenilli, Tatiele A B; Reichart, Klaus; Bacchi, Osny O S; Trivelin, Paulo C O; Dourado-Neto, Durval

    2007-12-01

    The use of the 15N label for agronomic research involving nitrogen (N) cycling and the fate of fertilizer-N is well established, however, in the case of long term experimentation with perennial crops like citrus, coffee and rubber tree, there are still shortcomings mainly due to large plant size, sampling procedures, detection levels and interferences on the system. This report tries to contribute methodologically to the design and development of 15N labeled fertilizer experiments, using as an example a coffee crop fertilized with 15N labeled ammonium sulfate, which was followed for two years. The N of the plant derived from the fertilizer was studied in the different parts of the coffee plant in order to evaluate its distribution within the plant and the agronomic efficiency of the fertilizer application practice. An enrichment of the fertilizer-N of the order of 2% 15N abundance was sufficient to study N absorption rates and to establish fertilizer-N balances after one and two years of coffee cropping. The main source of errors in the estimated values lies in the inherent variability among field replicates and not in the measurements of N contents and 15N enrichments of plant material by mass-spectrometry. PMID:18066442

  4. Rivermouth Alteration of Agricultural Impacts on Consumer Tissue δ15N

    PubMed Central

    Larson, James H.; Richardson, William B.; Vallazza, Jon M.; Nelson, John C.

    2013-01-01

    Terrestrial agricultural activities strongly influence riverine nitrogen (N) dynamics, which is reflected in the δ15N of riverine consumer tissues. However, processes within aquatic ecosystems also influence consumer tissue δ15N. As aquatic processes become more important terrestrial inputs may become a weaker predictor of consumer tissue δ15N. In a previous study, this terrestrial-consumer tissue δ15N connection was very strong at river sites, but was disrupted by processes occurring in rivermouths (the ‘rivermouth effect’). This suggested that watershed indicators of N loading might be accurate in riverine settings, but could be inaccurate when considering N loading to the nearshore of large lakes and oceans. In this study, the rivermouth effect was examined on twenty-five sites spread across the Laurentian Great Lakes. Relationships between agriculture and consumer tissue δ15N occurred in both upstream rivers and at the outlets where rivermouths connect to the nearshore zone, but agriculture explained less variation and had a weaker effect at the outlet. These results suggest that rivermouths may sometimes be significant sources or sinks of N, which would cause N loading estimates to the nearshore zone that are typically made at discharge gages further upstream to be inaccurate. Identifying definitively the controls over the rivermouth effect on N loading (and other nutrients) will require integration of biogeochemical and hydrologic models. PMID:23935980

  5. The 15N isotope to evaluate fertilizer nitrogen absorption efficiency by the coffee plant.

    PubMed

    Fenilli, Tatiele A B; Reichart, Klaus; Bacchi, Osny O S; Trivelin, Paulo C O; Dourado-Neto, Durval

    2007-12-01

    The use of the 15N label for agronomic research involving nitrogen (N) cycling and the fate of fertilizer-N is well established, however, in the case of long term experimentation with perennial crops like citrus, coffee and rubber tree, there are still shortcomings mainly due to large plant size, sampling procedures, detection levels and interferences on the system. This report tries to contribute methodologically to the design and development of 15N labeled fertilizer experiments, using as an example a coffee crop fertilized with 15N labeled ammonium sulfate, which was followed for two years. The N of the plant derived from the fertilizer was studied in the different parts of the coffee plant in order to evaluate its distribution within the plant and the agronomic efficiency of the fertilizer application practice. An enrichment of the fertilizer-N of the order of 2% 15N abundance was sufficient to study N absorption rates and to establish fertilizer-N balances after one and two years of coffee cropping. The main source of errors in the estimated values lies in the inherent variability among field replicates and not in the measurements of N contents and 15N enrichments of plant material by mass-spectrometry.

  6. Rivermouth alteration of agricultural impacts on consumer tissue δ15N

    USGS Publications Warehouse

    Larson, James H.; Richardson, William B.; Vallazza, Jonathan M.; Nelson, J. C.

    2013-01-01

    Terrestrial agricultural activities strongly influence riverine nitrogen (N) dynamics, which is reflected in the δ15N of riverine consumer tissues. However, processes within aquatic ecosystems also influence consumer tissue δ15N. As aquatic processes become more important terrestrial inputs may become a weaker predictor of consumer tissue δ15N. In a previous study, this terrestrial-consumer tissue δ15N connection was very strong at river sites, but was disrupted by processes occurring in rivermouths (the ‘rivermouth effect’). This suggested that watershed indicators of N loading might be accurate in riverine settings, but could be inaccurate when considering N loading to the nearshore of large lakes and oceans. In this study, the rivermouth effect was examined on twenty-five sites spread across the Laurentian Great Lakes. Relationships between agriculture and consumer tissue δ15N occurred in both upstream rivers and at the outlets where rivermouths connect to the nearshore zone, but agriculture explained less variation and had a weaker effect at the outlet. These results suggest that rivermouths may sometimes be significant sources or sinks of N, which would cause N loading estimates to the nearshore zone that are typically made at discharge gages further upstream to be inaccurate. Identifying definitively the controls over the rivermouth effect on N loading (and other nutrients) will require integration of biogeochemical and hydrologic models.

  7. Plant and Soil Natural Abundance delta-15N: Indicators of Nitrogen Cycling in the Catskill Mountains, New York, USA

    NASA Astrophysics Data System (ADS)

    Templer, P. H.; Lovett, G. M.; Weathers, K.; Arthur, M. A.

    2002-12-01

    We examined the potential use of natural abundance 15N of plants and soils as an indicator of forest nitrogen (N) cycling rates within the Catskill Mountains, NY. These watersheds receive among the highest rates of N deposition in the northeastern United States and are beginning to show signs of N saturation. Many studies have shown a link between increased N cycling rates and 15N enrichment of soil and plant pools. Faster rates of N cycling processes, especially nitrification, lead to fractionation of 14/15N, creating N products that are relatively depleted in 15N. This can lead to enrichment of soil pools, as lighter 14N is lost from the system via leaching or denitrification. Plant N pools can become increasingly enriched as they take up 15N-enriched soil N. Despite similar amounts of N deposition across the Catskill Mountains, forests dominated by different tree species appear to vary in the amount of N retained or lost to nearby streams. To determine if plant and soil 15N could be used as indicators of N cycling rates, we collected foliage, wood, litterfall, organic and mineral soil, and fine roots from single species stands of American beech (Fagus grandifolia), eastern hemlock (Tsuga canadensis), red oak (Quercus rubra), and sugar maple (Acer saccharum). Fine roots and soil 15N were highest within sugar maple stands (p<0.05). Sugar maple soils also had the highest rates of net nitrification and N leaching. Therefore, soil 15N appears to correlate with forest N retention and loss. However, 15N enrichment was highest within foliage, litterfall and wood of beech trees (p<0.05). The decoupling between foliage 15N and N cycling, as well as between 15N of foliage and fine roots, illustrates that it may not be possible to use a single plant pool as an indicator of N cycling rates.

  8. Unusually negative nitrogen isotopic compositions (δ15N) of mangroves and lichens in an oligotrophic, microbially-influenced ecosystem

    NASA Astrophysics Data System (ADS)

    Fogel, M. L.; Wooller, M. J.; Cheeseman, J.; Smallwood, B. J.; Roberts, Q.; Romero, I.; Meyers, M. J.

    2008-12-01

    Extremes in δ15N values in mangrove tissues and lichens (range =+4 to -22‰) were measured from a mangrove forest ecosystem located on Twin Cays, offshore islands in Belize, Central America. The N isotopic compositions and concentrations of NH4+/NH3 in porewater, rainwater, and atmospheric ammonia, and the δ15N of lichens, mangrove leaves, roots, stems, and wood were examined to study the biogeochemical processes important for establishing these unusual N isotopic ratios. Dwarfed Rhizophora mangle trees had the most negative δ15N, whereas fringing Rhizophora trees, the most positive δ15N values. Porewater ammonium concentrations had little relationship to N isotopic fractionation in mangrove tissues. In dwarfed mangroves, the δ15N of fine and coarse roots were 6-9‰ more positive than leaf tissue from the same tree, indicating different sources of N for root and leaf tissues. When P was added to dwarfed mangrove trees without added N, δ15N increased within one year from -12‰ to -2‰, approaching the δ15N of porewater ammonium (δ15N=+4‰). Isotopically depleted ammonia in the atmosphere (δ15N=-19‰) and in rainwater (δ15N=-10‰) were found on Twin Cays. We propose that foliar uptake of these atmospheric sources by P-stressed, dwarfed mangrove trees and lichens can explain their very negative δ15N values. In environments where P is limiting for growth, uptake of atmospheric N by Rhizophora mangle may be an important adaptive strategy.

  9. Tracer and hydrometric study of preferential flow in large undisturbed soil cores from the Georgia Piedmont, USA

    USGS Publications Warehouse

    McIntosh, Janice; McDonnell, Jeffrey J.; Peters, Norman E.

    1999-01-01

    We studied the temporal patterns of tracer throughput in the outflow of large (30 cm diameter by 38 cm long) undisturbed cores from the Panola Mountain Research Watershed, Georgia. Tracer breakthrough was affected by soil structure and rainfall intensity. Two rainfall intensities (20 and 40 mm hr-1) for separate Cl- and Br- amended solutions were applied to two cores (one extracted from a hillslope soil and one extracted from a residual clay soil on the ridge). For both low and high rainfall intensity experiments, preferential flow occurred in the clay core, but not in the hillslope core. The preferential flow is attributed to well-developed interpedal macrochannels that are commonly found in structured clay soils, characteristic of the ridge site. However, each rainfall intensity exceeded the matrix infiltration capacity at the top of the hillslope core, but did not exceed the matrix infiltration capacity at the middle and bottom of the hillslope core and at all levels in the clay core. Localized zones of saturation created when rainfall intensity exceeds the matrix infiltration capacity may cause water and tracer to overflow from the matrix into macrochannels, where preferential flow occurs to depth in otherwise unsaturated soil. Copyright © 1999 John Wiley & Sons, Ltd.

  10. Tracer and hydrometric study of preferential flow in large undisturbed soil cores from the Georgia Piedmont, USA

    NASA Astrophysics Data System (ADS)

    McIntosh, Janice; McDonnell, Jeffrey J.; Peters, Norman E.

    1999-02-01

    We studied the temporal patterns of tracer throughput in the outflow of large (30 cm diameter by 38 cm long) undisturbed cores from the Panola Mountain Research Watershed, Georgia. Tracer breakthrough was affected by soil structure and rainfall intensity. Two rainfall intensities (20 and 40 mm hr-1) for separate Cl- and Br- amended solutions were applied to two cores (one extracted from a hillslope soil and one extracted from a residual clay soil on the ridge). For both low and high rainfall intensity experiments, preferential flow occurred in the clay core, but not in the hillslope core. The preferential flow is attributed to well-developed interpedal macrochannels that are commonly found in structured clay soils, characteristic of the ridge site. However, each rainfall intensity exceeded the matrix infiltration capacity at the top of the hillslope core, but did not exceed the matrix infiltration capacity at the middle and bottom of the hillslope core and at all levels in the clay core. Localized zones of saturation created when rainfall intensity exceeds the matrix infiltration capacity may cause water and tracer to overflow from the matrix into macrochannels, where preferential flow occurs to depth in otherwise unsaturated soil.

  11. Macroalgae δ15N values in well-mixed estuaries: Indicator of anthropogenic nitrogen input or macroalgae metabolism?

    NASA Astrophysics Data System (ADS)

    Raimonet, Mélanie; Guillou, Gaël; Mornet, Françoise; Richard, Pierre

    2013-03-01

    Although nitrogen stable isotope ratio (δ15N) in macroalgae is widely used as a bioindicator of anthropogenic nitrogen inputs to the coastal zone, recent studies suggest the possible role of macroalgae metabolism in δ15N variability. Simultaneous determinations of δ15N of dissolved inorganic nitrogen (DIN) along the land-sea continuum, inter-species variability of δ15N and its sensitivity to environmental factors are necessary to confirm the efficiency of macroalgae δ15N in monitoring nitrogen origin in mixed-use watersheds. In this study, δ15N of annual and perennial macroalgae (Ulva sp., Enteromorpha sp., Fucus vesiculosus and Fucus serratus) are compared to δ15N-DIN along the Charente Estuary, after characterizing δ15N of the three main DIN sources (i.e. cultivated area, pasture, sewage treatment plant outlet). During late winter and spring, when human activities produce high DIN inputs, DIN sources exhibit distinct δ15N signals in nitrate (NO) and ammonium (NH): cultivated area (+6.5 ± 0.6‰ and +9.0 ± 11.0‰), pasture (+9.2 ± 1.8‰ and +12.4‰) and sewage treatment plant discharge (+16.9 ± 8.7‰ and +25.4 ± 5.9‰). While sources show distinct δN- in this multiple source catchment, the overall mixture of NO sources - generally >95% DIN - leads to low variations of δN-NO at the mouth of the estuary (+7.7 to +8.4‰). Even if estuarine δN-NO values are not significantly different from pristine continental and oceanic site (+7.3‰ and +7.4‰), macroalgae δ15N values are generally higher at the mouth of the estuary. This highlights high anthropogenic DIN inputs in the estuary, and enhanced contribution of 15N-depleted NH in oceanic waters. Although seasonal variations in δN-NO are low, the same temporal trends in macroalgae δ15N values at estuarine and oceanic sites, and inter-species differences in δ15N values, suggest that macroalgae δ15N values might be modified by the metabolic response of macroalgae to environmental parameters (e

  12. Intestinal renal metabolism of L-citrulline and L-arginine following enteral or parenteral infusion of L-alanyl-L-[2,15N]glutamine or L-[2,15N]glutamine in mice.

    PubMed

    Boelens, Petra G; van Leeuwen, Paul A M; Dejong, Cornelis H C; Deutz, Nicolaas E P

    2005-10-01

    Previously, we observed increased plasma arginine (ARG) concentrations after glutamine (GLN)-enriched diets, in combination with clinical benefits. GLN delivers nitrogen for ARG synthesis, and the present study was designed to quantify the interorgan relationship of exogenous L-GLN or GLN dipeptide, by enteral or parenteral route, contributing to intestinal citrulline (CIT) and renal de novo ARG synthesis in mice. To study this, we used a multicatheterized mouse model with Swiss mice (n = 43) in the postabsorptive state. Stable isotopes were infused into the jugular vein or into the duodenum {per group either free L-[2,(15)N]GLN or dipeptide L-ALA-L-[2,(15)N]GLN, all with L-[ureido-(13)C-(2)H(2)]CIT and L-[guanidino-(15)N(2)-(2)H(2)]ARG} to establish renal and intestinal ARG and CIT metabolism. Blood flow was measured using (14)C-para-aminohippuric acid. Net intestinal CIT release, renal uptake of CIT, and net renal ARG efflux was found, as assessed by arteriovenous flux measurements. Quantitatively, more de novo L-[2,(15)N]CIT was produced when free L-[2,(15)N]GLN was given than when L-ALA-L-[2,(15)N]GLN was given, whereas renal de novo L-[2,(15)N]ARG was similar in all groups. In conclusion, the intestinal-renal axis is hereby proven in mice in that L-[2,(15)N]GLN or dipeptide were both converted into de novo renal L-[2,(15)N]ARG; however, not all was derived from intestinal L-[2,(15)N]CIT production. In this model, the feeding route and form of GLN did not influence de novo renal ARG production derived from GLN.

  13. Unusually negative nitrogen isotopic compositions (δ15N) of mangroves and lichens in an oligotrophic, microbially-influenced ecosystem

    NASA Astrophysics Data System (ADS)

    Fogel, M. L.; Wooller, M. J.; Cheeseman, J.; Smallwood, B. J.; Roberts, Q.; Romero, I.; Jacobsen Meyers, M.

    2008-02-01

    Extremes in (δ15N values in mangrove tissues and lichens (range = +4 to -22‰) were measured from a mangrove forest ecosystem located on Twin Cays, offshore islands in Belize, Central America. The N isotopic compositions and concentrations of NH4+/NH3 in porewater, rainwater, atmospheric ammonia, mangrove leaves, roots, stems, and wood, and lichens, were examined to study the biogeochemical processes important for establishing these unusual N isotopic ratios. Porewater ammonium concentrations had little to no relationship to N isotopic fractionation in mangrove tissues. The δ15N of fine and coarse roots was 9‰ more positive than leaf tissue from the same tree. When P was added to dwarfed mangrove trees without added N, δ15N increased within one year to a &delta:15N closer to the &delta:15N of porewater ammonium (δ15N=+4‰). Isotopically negative ammonia in the atmosphere (δ15N=-18‰) and in rainwater (δ15N=-9‰) were found on Twin Cays and may be sources of available N for isotopically depleted mangrove trees and lichens. In highly stressed, severely P limited trees, uptake of atmospheric N by Rhizophora mangle may be an important adaptive strategy.

  14. Biosynthetic uniform 13C,15N-labelling of zervamicin IIB. Complete 13C and 15N NMR assignment.

    PubMed

    Ovchinnikova, Tatyana V; Shenkarev, Zakhar O; Yakimenko, Zoya A; Svishcheva, Natalia V; Tagaev, Andrey A; Skladnev, Dmitry A; Arseniev, Alexander S

    2003-01-01

    Zervamicin IIB is a member of the alpha-aminoisobutyric acid containing peptaibol antibiotics. A new procedure for the biosynthetic preparation of the uniformly 13C- and 15N-enriched peptaibol is described This compound was isolated from the biomass of the fungus-producer Emericellopsis salmosynnemata strain 336 IMI 58330 obtained upon cultivation in the totally 13C, 15N-labelled complete medium. To prepare such a medium the autolysed biomass and the exopolysaccharides of the obligate methylotrophic bacterium Methylobacillus flagellatus KT were used. This microorganism was grown in totally 13C, 15N-labelled minimal medium containing 13C-methanol and 15N-ammonium chloride as the only carbon and nitrogen sources. Preliminary NMR spectroscopic analysis indicated a high extent of isotope incorporation (> 90%) and led to the complete 13C- and 15N-NMR assignment including the stereospecific assignment of Aib residues methyl groups. The observed pattern of the structurally important secondary chemical shifts of 1H(alpha), 13C=O and 13C(alpha) agrees well with the previously determined structure of zervamicin IIB in methanol solution. PMID:14658801

  15. A radiogenic isotope tracer study of transatlantic dust transport from Africa to the Caribbean

    USGS Publications Warehouse

    Kumar, A.; Abouchami, W.; Galer, S.J.G.; Garrison, V.H.; Williams, E.; Andreae, M.O.

    2014-01-01

    Many studies have suggested that long-range transport of African desert dusts across the Atlantic Ocean occurs, delivering key nutrients and contributing to fertilization of the Amazon rainforest. Here we utilize radiogenic isotope tracers – Sr, Nd and Pb – to derive the provenance, local or remote, and pathways of dust transport from Africa to the Caribbean. Atmospheric total suspended particulate (TSP) matter was collected in 2008 on quartz fibre filters, from both sides of the Atlantic Ocean at three different locations: in Mali (12.6°N, 8.0°W; 555 m a.s.l.), Tobago (11.3°N, 60.5°W; 329 m a.s.l.) and the U.S. Virgin Islands (17.7°N, 64.6°W; 27 m a.s.l.). Both the labile phase, representative of the anthropogenic signal, and the refractory detrital silicate fraction were analysed. Dust deposits and soils from around the sampling sites were measured as well to assess the potential contribution from local sources to the mineral dust collected. The contribution from anthropogenic sources of Pb was predominant in the labile, leachate phase. The overall similarity in Pb isotope signatures found in the leachates is attributed to a common African source of anthropogenic Pb, with minor inputs from other sources, such as from Central and South America. The Pb, Sr and Nd isotopic compositions in the silicate fraction were found to be systematically more radiogenic than those in the corresponding labile phases. In contrast, Nd and Sr isotopic compositions from Mali, Tobago, and the Virgin Islands are virtually identical in both leachates and residues. Comparison with existing literature data on Saharan and Sahelian sources constrains the origin of summer dust transported to the Caribbean to mainly originate from the Sahel region, with some contribution from northern Saharan sources. The source regions derived from the isotope data are consistent with 7-day back-trajectory analyses, demonstrating the usefulness of radiogenic isotopes in tracing dust provenance and

  16. Tracer studies of pathways and rates of meltwater transport through Arctic summer sea ice

    NASA Astrophysics Data System (ADS)

    Eicken, H.; Krouse, H. R.; Kadko, D.; Perovich, D. K.

    2002-10-01

    At the Surface Heat Budget of the Arctic Ocean (SHEBA) program's field site in the northern Chukchi Sea, snow and ice meltwater flow was found to have a strong impact on the heat and mass balance of sea ice during the summer of 1998. Pathways and rates of meltwater transport were derived from tracer studies (H218O, 7Be, and release of fluorescent dyes), complemented by in situ sea-ice permeability measurements. It was shown that the balance between meltwater supply at the surface (averaging between 3.5 and 10.5 mm d-1) and ice permeability (between <10-11 and >10-9 m2) determines the retention and pooling of meltwater, which in turn controls ice albedo. We found that the seasonal evolution of first-year and multiyear ice permeability and surface morphology determine four distinct stages of melt. At the start of the ablation season (stage 1), ponding is widespread and lateral melt flow dominates. Several tens of cubic meters of meltwater per day were found to drain hundreds to thousands of square meters of ice through flaws and permeable zones. Significant formation of underwater ice, composed between <30 and >50% of meteoric water, formed at these drainage sites. Complete removal of snow cover, increase in ice permeability, and reductions in hydraulic gradients driving fluid flow mark stage 2, concurrent with a reduction in pond coverage and albedo. During stage 3, maximum permeabilities were measured, with surface meltwater penetrating to 1 m depth in the ice and convective overturning and desalination found to dominate the lower layers of first-year and thin multiyear ice. Enhanced fluid flow into flaws and permeable zones was observed to promote ice floe breakup and disintegration, concurrent with increases in pond salinities and 7Be. Advective heat flows of several tens of watts per square meter were derived, promoting widening of ponds and increases in pond coverage. Stage 4 corresponds to freeze-up. Roughly 40% of the total surface melt was retained by the

  17. Heavy water and 15N labeling with NanoSIMS analysis reveals growth-rate dependent metabolic heterogeneity in chemostats

    PubMed Central

    McGlynn, Shawn E.; Green-Saxena, Abigail

    2015-01-01

    To measure single cell microbial activity and substrate utilization patterns in environmental systems, we employ a new technique using stable isotope labeling of microbial populations with heavy water (a passive tracer) and 15N ammonium in combination with multi-isotope imaging mass spectrometry. We demonstrate simultaneous NanoSIMS analysis of hydrogen, carbon and nitrogen at high spatial and mass resolution, and report calibration data linking single cell isotopic compositions to the corresponding bulk isotopic equivalents for Pseudomonas aeruginosa and Staphylococcus aureus. Our results show that heavy water is capable of quantifying in situ single cell microbial activities ranging from generational time scales of minutes to years, with only light isotopic incorporation (∼0.1 atom % 2H). Applying this approach to study the rates of fatty acid biosynthesis by single cells of S. aureus growing at different rates in chemostat culture (∼6 hours, 1 day and 2 week generation times), we observe the greatest anabolic activity diversity in the slowest growing populations. By using heavy water to constrain cellular growth activity, we can further infer the relative contributions of ammonium vs. amino acid assimilation to the cellular nitrogen pool. The approach described here can be applied to disentangle individual cell activities even in nutritionally complex environments. PMID:25655651

  18. Retrieving nitrogen isotopic signatures from fresh leaf reflectance spectra: disentangling δ(15)N from biochemical and structural leaf properties.

    PubMed

    Hellmann, Christine; Große-Stoltenberg, André; Lauströ, Verena; Oldeland, Jens; Werner, Christiane

    2015-01-01

    Linking remote sensing methodology to stable isotope ecology provides a promising approach to study ecological processes from small to large spatial scales. Here, we show that δ(15)N can be detected in fresh leaf reflectance spectra of field samples along a spatial gradient of increasing nitrogen input from an N2-fixing invasive species. However, in field data it is unclear whether δ(15)N directly influences leaf reflectance spectra or if the relationship is based on covariation between δ(15)N and foliar nitrogen content or other leaf properties. Using a (15)N-labeling approach, we experimentally varied δ(15)N independently of any other leaf properties in three plant species across different leaf developmental and physiological states. δ(15)N could successfully be modeled by means of partial least squares (PLSs) regressions, using leaf reflectance spectra as predictor variables. PLS models explained 53-73% of the variation in δ(15)N within species. Several wavelength regions important for predicting δ(15)N were consistent across species and could furthermore be related to known absorption features of N-containing molecular bonds. By eliminating covariation with other leaf properties as an explanation for the relationship between reflectance and δ(15)N, our results demonstrate that (15)N itself has an inherent effect on leaf reflectance spectra. Thus, our study substantiates the use of spectroscopic measurements to retrieve isotopic signatures for ecological studies and encourages future development. Furthermore, our results highlight the great potential of optical measurements for up-scaling isotope ecology to larger spatial scales.

  19. Retrieving nitrogen isotopic signatures from fresh leaf reflectance spectra: disentangling δ15N from biochemical and structural leaf properties

    PubMed Central

    Hellmann, Christine; Große-Stoltenberg, André; Lauströ, Verena; Oldeland, Jens; Werner, Christiane

    2015-01-01

    Linking remote sensing methodology to stable isotope ecology provides a promising approach to study ecological processes from small to large spatial scales. Here, we show that δ15N can be detected in fresh leaf reflectance spectra of field samples along a spatial gradient of increasing nitrogen input from an N2-fixing invasive species. However, in field data it is unclear whether δ15N directly influences leaf reflectance spectra or if the relationship is based on covariation between δ15N and foliar nitrogen content or other leaf properties. Using a 15N-labeling approach, we experimentally varied δ15N independently of any other leaf properties in three plant species across different leaf developmental and physiological states. δ15N could successfully be modeled by means of partial least squares (PLSs) regressions, using leaf reflectance spectra as predictor variables. PLS models explained 53–73% of the variation in δ15N within species. Several wavelength regions important for predicting δ15N were consistent across species and could furthermore be related to known absorption features of N-containing molecular bonds. By eliminating covariation with other leaf properties as an explanation for the relationship between reflectance and δ15N, our results demonstrate that 15N itself has an inherent effect on leaf reflectance spectra. Thus, our study substantiates the use of spectroscopic measurements to retrieve isotopic signatures for ecological studies and encourages future development. Furthermore, our results highlight the great potential of optical measurements for up-scaling isotope ecology to larger spatial scales. PMID:25983740

  20. The Numerical Simulation of a Tracer-Release Field Project to Study Motion within the Nocturnal Boundary Layer

    NASA Astrophysics Data System (ADS)

    Werth, D. W.; Leclerc, M. Y.; Buckley, R.; Parker, M.; Kurzeja, R.; Duarte, H. F.; Zhang, G.; Durden, D.

    2009-12-01

    The Savannah River National Laboratory (SRNL), Brookhaven National Laboratory (BNL), the University of Georgia (UGA), and the National Oceanic and Atmospheric Administration (NOAA) conducted a regional tracer experiment to study the nocturnal behavior of CO2 in the vicinity of an instrumented tall tower during two nights on May 11th and 12th, 2009. The experiment consisted of a release of five perfluorocarbon tracer (PFTs) compounds in twelve unique locations in Aiken County, South Carolina. Intensive meteorological measurements including in-situ turbulence were made in conjunction with the release and sampling of the PFTs. A 300m tower was also used to collect data from higher levels, allowing us to determine the extent to which the tracer was mixed vertically. Lagrangian plume simulations performed during the experiment demonstrated transport over distances of >8 km, and correlated well with in situ sampling. The area was characterized by heavy vegetation cover, and carbon dioxide concentrations were also monitored in an effort to determine how respiration and advection affect CO2 levels in the stable layer. Tracer release locations were carefully selected via a fine-scale mesoscale modeling study of similar nights. The purpose of these experiments was to provide data that will be used to increase the understanding of the terrestrial carbon budget, especially with respect to nocturnal boundary layer (NBL) phenomena such as low level jets and breaking gravity waves. Using these data, a simulation of the motion of the tracer within the boundary layer was developed using the Regional Atmospheric Modeling System (RAMS) mesoscale model coupled to a tracer model. The RAMS model was also coupled to the Simple Biosphere (SiB) vegetation model, which allowed for the simulation of the release of carbon dioxide into the NBL. The simulation results are used to validate the NBL hypothesis of CO2 monitoring, by which the release of CO2 can be correlated with the accumulation

  1. Synthesis and NMR of {sup 15}N-labeled DNA fragments

    SciTech Connect

    Jones, R.A.

    1994-12-01

    DNA fragments labeled with {sup 15}N at the ring nitrogens and at the exocyclic amino groups can be used to obtain novel insight into interactions such as base pairing, hydration, drug binding, and protein binding. A number of synthetic routes to {sup 15}N-labeled pyrimidine nucleosides, purines, and purine nucleosides have been reported. Moreover, many of these labeled bases or monomers have been incorporated into nucleic acids, either by chemical synthesis or by biosynthetic procedures. The focus of this chapter will be on the preparation of {sup 15}N-labeled purine 2{prime}-deoxynucleosides, their incorporation into DNA fragments by chemical synthesis, and the results of NMR studies using these labeled DNA fragments.

  2. Towards interpreting nitrate-δ15N records in ice cores in terms of nitrogen oxide sources

    NASA Astrophysics Data System (ADS)

    Hastings, M. G.; Buffen, A. M.

    2011-12-01

    The isotopic composition of nitrate preserved in ice cores offers unique potential for reconstructing past contributions of nitrogen oxides (NOx = NO and NO2) to the atmosphere. Sources of NOx imprint a nitrogen stable isotopic (δ15N) signature, which can be conserved during subsequent oxidation to form nitrate. Major sources of NOx include fossil fuels combustion, biomass burning, microbial processes in soils, and lightning, and thus a quantitative tracer of emissions would help detail connections between the atmosphere, the biosphere, and climate. Unfortunately, the δ15N signatures of most NOx sources are not yet well enough constrained to allow for quantitative partitioning, though new methodology for directly collecting NOx for isotopic analysis is promising (Fibiger and Hastings, A43D-0265, AGU 2010). Still, a growing network of ice core δ15N records may offer insight into source signatures, as different sources are important to different regions of the world. For example, a 300-year ice core record of nitrate-δ15N from Summit, Greenland shows a clear and significant 12% (vs. N2) decrease since the Preindustrial that reflects emissions from fossil fuel combustion and/or soils related to changing agricultural practices in North America and Europe. Over the same time period, Antarctic ice cores show no such trend in δ15N. This would be consistent with previous work suggesting that biomass burning and/or stratospheric intrusion of NOx produced from N2O oxidation are dominant sources for nitrate formation at high southern latitudes. In comparison to the polar records, nitrate in tropical ice cores should represent more significant inputs from lightning, microbial processes in soils, and biomass burning. This may be reflected in new results from a high-elevation site in the Peruvian Andes that shows strong seasonal δ15N cycles of up to 15% (vs. N2). We compare and contrast these records in an effort to evaluate the contribution of NOx sources to nitrate over

  3. Effect of tidal phase on solute flushing from a strait: SF6 tracer study in the East River, New York

    NASA Astrophysics Data System (ADS)

    Caplow, T.; Schlosser, P.; Ho, D. T.

    2003-12-01

    Flow in the East River, a 25 km tidal strait connecting Long Island Sound with New York Harbor, is driven by a tidal phase lag between the two ends of the strait. The direction and rate of solutes transported in the strait, including natural materials as well as anthropogenic contaminants, has important implications for the environmental management of Long Island Sound and other fragile local ecosystems. Sulfur hexafluoride (SF6) is a successful deliberate tracer for rivers, estuaries, and coastal areas. It is non-reactive, inexpensive, and offers an extremely low detection limit. High-resolution transport studies of complex coastal and estuarine areas up to 100 km2, and lasting up to two weeks, have recently been achieved using a boat-mounted SF6 measurement system with a sampling interval of 1 min and a detection limit of 1 x 10-14 mol L-1. In June 2003, two injections of 6.2 mol sulfur hexafluoride (SF6) were made 8 days apart in the East River to study residual circulation and rates of solute dissipation at different states of the tide. Both injections were made at the same location, but the first injection occurred at the slack before flood (northward flow), and the second injection occurred at the slack before ebb (southward flow). Tidally synchronized surveys of the SF6 tracer patch were made by boat for 7 days following the flood injection and for 5 days following the ebb injection. For the flood and ebb injections, respectively, mean displacement of the center of tracer mass within the East River, a proxy for residual circulation, was northward at 0.31 +/- 0.35 and 1.5 +/- 1.0 km day-1, mean fractional tracer loss due to tidal flushing was 0.32 +/- 0.06 day-1 and 0.52 +/- 0.10 day-1, and mean residence time was 2.6 +/- 0.4 days and 1.3 +/- 0.6 days. These tracer loss rates include a small correction for air-water gas exchange, which was estimated by a combination of previously established relationships between gas transfer velocity and wind speeds, river

  4. 15N isotope fractionation in an aquatic food chain: Bellamya aeruginosa (Reeve) as an algal control agent.

    PubMed

    Han, Shiqun; Yan, Shaohua; Chen, Kaining; Zhang, Zhenhua; Zed, Rengel; Zhang, Jianqiu; Song, Wei; Liu, Haiqin

    2010-01-01

    15N isotope tracer techniques and ecological modeling were adopted to investigate the fractionation of nitrogen, its uptake and transformation in algae and snail (Bellamya aeruginosa Reeve). Different algal species were found to differ in their uptake of nitrogen isotopes. Microcystis aeruginisa Kütz. demonstrated the greatest 15N accumulation capacity, with the natural variation in isotopic ratio (delta 15N) and the isotope fractionation factor (epsilon, % per hundred) being the highest among the species investigated. The transformation and utilization of 15N by snails differed depending on the specific algae consumed (highest for Chlorella pyrenoidosa Chick., lowest for M. aeruginisa). When snails was seeded in the experimental pond, the algae population structure changed significantly, and total algal biomass as well as the concentration of all nitrogen species decreased, causing an increase in water transparency. A model, incorporating several chemical and biological parameters, was developed to predict algal biomass in an aquatic system when snails was present. The data collected during this investigation indicated that the gastropods such as snails could significantly impact biological community and water quality of small water bodies, suggesting a role for biological control of noxious algal blooms associated with eutrophication.

  5. Radioisotope tracer studies in the NASA Skylab ethothermic brazing experiment M-552

    NASA Technical Reports Server (NTRS)

    Braski, D. N.; Adair, H. L.; Kobisk, E. H.

    1974-01-01

    The first use of radioisotope tracer for mapping flow patterns during brazing of metal components in a space environment (near-zero gravity) proved successful. A nickel ferrule was brazed to a nickel tube with Lithobraze BT (71.8% Ag, 28% Cu, 0.2% Li) which contained a trace amount of radioactive Ag-110. Mapping of the flow of the braze alloy in the annulus formed between the tube and the concentric ferrule was determined by counting the radiation intensity as a function of position in the braze joint. Significant information concerning the thermal history of the braze was determined.

  6. Effects of four different restoration treatments on the natural abundance of (15)n stable isotopes in plants.

    PubMed

    Temperton, Vicky M; Märtin, Lea L A; Röder, Daniela; Lücke, Andreas; Kiehl, Kathrin

    2012-01-01

    δ(15)N signals in plant and soil material integrate over a number of biogeochemical processes related to nitrogen (N) and therefore provide information on net effects of multiple processes on N dynamics. In general little is known in many grassland restoration projects on soil-plant N dynamics in relation to the restoration treatments. In particular, δ(15)N signals may be a useful tool to assess whether abiotic restoration treatments have produced the desired result. In this study we used the range of abiotic and biotic conditions provided by a restoration experiment to assess to whether the restoration treatments and/or plant functional identity and legume neighborhood affected plant δ(15)N signals. The restoration treatments consisted of hay transfer and topsoil removal, thus representing increasing restoration effort, from no restoration measures, through biotic manipulation to major abiotic manipulation. We measured δ(15)N and %N in six different plant species (two non-legumes and four legumes) across the restoration treatments. We found that restoration treatments were clearly reflected in δ(15)N of the non-legume species, with very depleted δ(15)N associated with low soil N, and our results suggest this may be linked to uptake of ammonium (rather than nitrate). The two non-legume species differed considerably in their δ(15)N signals, which may be related to the two species forming different kinds of mycorrhizal symbioses. Plant δ(15)N signals could clearly separate legumes from non-legumes, but our results did not allow for an assessment of legume neighborhood effects on non-legume δ(15)N signals. We discuss our results in the light of what the δ(15)N signals may be telling us about plant-soil N dynamics and their potential value as an indicator for N dynamics in restoration.

  7. Effects of Four Different Restoration Treatments on the Natural Abundance of 15N Stable Isotopes in Plants

    PubMed Central

    Temperton, Vicky M.; Märtin, Lea L. A.; Röder, Daniela; Lücke, Andreas; Kiehl, Kathrin

    2012-01-01

    δ15N signals in plant and soil material integrate over a number of biogeochemical processes related to nitrogen (N) and therefore provide information on net effects of multiple processes on N dynamics. In general little is known in many grassland restoration projects on soil–plant N dynamics in relation to the restoration treatments. In particular, δ15N signals may be a useful tool to assess whether abiotic restoration treatments have produced the desired result. In this study we used the range of abiotic and biotic conditions provided by a restoration experiment to assess to whether the restoration treatments and/or plant functional identity and legume neighborhood affected plant δ15N signals. The restoration treatments consisted of hay transfer and topsoil removal, thus representing increasing restoration effort, from no restoration measures, through biotic manipulation to major abiotic manipulation. We measured δ15N and %N in six different plant species (two non-legumes and four legumes) across the restoration treatments. We found that restoration treatments were clearly reflected in δ15N of the non-legume species, with very depleted δ15N associated with low soil N, and our results suggest this may be linked to uptake of ammonium (rather than nitrate). The two non-legume species differed considerably in their δ15N signals, which may be related to the two species forming different kinds of mycorrhizal symbioses. Plant δ15N signals could clearly separate legumes from non-legumes, but our results did not allow for an assessment of legume neighborhood effects on non-legume δ15N signals. We discuss our results in the light of what the δ15N signals may be telling us about plant–soil N dynamics and their potential value as an indicator for N dynamics in restoration. PMID:22645597

  8. Determination of γ -ray widths in 15N using nuclear resonance fluorescence

    NASA Astrophysics Data System (ADS)

    Szücs, T.; Bemmerer, D.; Caciolli, A.; Fülöp, Zs.; Massarczyk, R.; Michelagnoli, C.; Reinhardt, T. P.; Schwengner, R.; Takács, M. P.; Ur, C. A.; Wagner, A.; Wagner, L.

    2015-07-01

    Background: The stable nucleus 15N is the mirror of 15O, the bottleneck in the hydrogen burning CNO cycle. Most of the 15N level widths below the proton emission threshold are known from just one nuclear resonance fluorescence (NRF) measurement, with limited precision in some cases. A recent experiment with the AGATA demonstrator array determined level lifetimes using the Doppler shift attenuation method in 15O. As a reference and for testing the method, level lifetimes in 15N have also been determined in the same experiment. Purpose: The latest compilation of 15N level properties dates back to 1991. The limited precision in some cases in the compilation calls for a new measurement to enable a comparison to the AGATA demonstrator data. The widths of several 15N levels have been studied with the NRF method. Method: The solid nitrogen compounds enriched in 15N have been irradiated with bremsstrahlung. The γ rays following the deexcitation of the excited nuclear levels were detected with four high-purity germanium detectors. Results: Integrated photon-scattering cross sections of 10 levels below the proton emission threshold have been measured. Partial γ -ray widths of ground-state transitions were deduced and compared to the literature. The photon-scattering cross sections of two levels above the proton emission threshold, but still below other particle emission energies have also been measured, and proton resonance strengths and proton widths were deduced. Conclusions: Gamma and proton widths consistent with the literature values were obtained, but with greatly improved precision.

  9. Tracer development at ESRI

    SciTech Connect

    Adams, M.C.; Rose, P.E.; McPherson, P.

    1996-04-10

    At ESRI the Tracer Development Program is divided into three components: liquid-phase tracers, vapor-phase tracers, and pre-test modeling. The liquid-phase project has tested 40 aromatic acids and 10 fluorescent tracers for geothermal use. The vapor-phase project, which develops tracers for reservoirs such as the Geysers, is currently focused on testing SF{sub 6} at high temperatures and examining HPLC methods for the sensitive analysis of alcohol tracers. The pre-test modeling component is exploring the feasibility of using simple numerical models to lower the cost of tracer tests by providing estimates of tracer quantities, flowpaths, and arrival times.

  10. Viral tracer studies indicate contamination of marine waters by sewage disposal practices in key largo, Florida.

    PubMed

    Paul, J H; Rose, J B; Brown, J; Shinn, E A; Miller, S; Farrah, S R

    1995-06-01

    Domestic wastewater disposal practices in the Florida Keys are primarily limited to on-site disposal systems such as septic tanks, injection wells, and illegal cesspits. Poorly treated sewage is thus released into the highly porous subsurface Key Largo limestone matrix. To investigate the fate and transport of sewage in the subsurface environment and the potential for contamination of marine surface waters, we employed bacteriophages as tracers in a domestic septic system and a simulated injection well in Key Largo, Florida. Transport of bacteriophage (Phi)HSIC-1 from the septic tank to adjacent surface canal waters and outstanding marine waters occurred in as little as 11 and 23 h, respectively. Transport of the Salmonella phage PRD1 from the simulated injection well to a canal adjacent to the injection site occurred in 11.2 h. Estimated rates of migration of viral tracers ranged from 0.57 to 24.2 m/h, over 500-fold greater than flow rates measured previously by subsurface flow meters in similar environments. These results suggest that current on-site disposal practices can lead to contamination of the subsurface and surface marine waters in the Keys. PMID:16535046

  11. Stepwise enrichment of 15N along food chains: Further evidence and the relation between δ 15N and animal age

    NASA Astrophysics Data System (ADS)

    Minagawa, Masao; Wada, Eitaro

    1984-05-01

    The isotopic composition of nitrogen was measured in marine and fresh-water animals from the East China Sea, The Bering Sea, Lake Ashinoko and Usujiri intertidal zone. Primary producers, showed average δ15Nversus atmospheric nitrogen of +5.0%. (+3.4 to +7.5) in the Bering Sea and Lake Ashinoko, and +6.8%. (+6.0 to +7.6) in Usujiri intertidal zone. Blue green algae from the East China Sea show an average -0.55%. (-0.8 to +1.2). All consumers, Zooplankton, fish and bird exhibited Stepwise enrichment of 15N with increasing trophic level. The 15N enrichment at a single feeding process ranged from +1.3 to +5.3 averaging +3.4 ± 1.1%.. This isotopic fractionation seems to be independent of habitat. The effect of age in animals was obtained by analyzing two marine mussels. The soft tissue nitrogen showed +2.0%. enrichment relative to that of primary producers, and the magnitude was almost constant with shell ages ranging from 0 to 8 years. A similar 15N enrichment occurs in all Molluscs, Crustaceans, Insecta, Amphibia, Fish, Ave and Mammal species regardless of the difference in the form of excreted nitrogen and in laboratory cultured fish, brine shrimp and mice (+2.9 to +4.9%.). The excreted ammonia from guppy was sufficiently light to balance the concentration of 15N to animal body.

  12. Study of sediment movement in an irrigated maize-cotton system combining rainfall simulations, sediment tracers and soil erosion models

    NASA Astrophysics Data System (ADS)

    Guzmán, Gema; Laguna, Ana; Cañasveras, Juan Carlos; Boulal, Hakim; Barrón, Vidal; Gómez-Macpherson, Helena; Giráldez, Juan Vicente; Gómez, José Alfonso

    2015-05-01

    Although soil erosion is one of the main threats to agriculture sustainability in many areas of the world, its processes are difficult to measure and still need a better characterization. The use of iron oxides as sediment tracers, combined with erosion and mixing models opens up a pathway for improving the knowledge of the erosion and redistribution of soil, determining sediment sources and sinks. In this study, magnetite and a multivariate mixing model were used in rainfall simulations at the micro-plot scale to determine the source of the sediment at different stages of a furrow-ridge system both with (+T) and without (-T) wheel tracks. At a plot scale, magnetite, hematite and goethite combined with two soil erosion models based on the kinematic wave approach were used in a sprinkler irrigation test to study trends in sediment transport and tracer dynamics along furrow lengths under a wide range of scenarios. In the absence of any stubble cover, sediment contribution from the ridges was larger than the furrow bed one, almost 90%, while an opposite trend was observed with stubble, with a smaller contribution from the ridge (32%) than that of the bed, at the micro-plot trials. Furthermore, at a plot scale, the tracer concentration analysis showed an exponentially decreasing trend with the downstream distance both for sediment detachment along furrows and soil source contribution from tagged segments. The parameters of the distributed model KINEROS2 have been estimated using the PEST Model to obtain a more accurate evaluation. Afterwards, this model was used to simulate a broad range of common scenarios of topography and rainfall from commercial farms in southern Spain. Higher slopes had a significant influence on sediment yields while long furrow distances allowed a more efficient water use. For the control of runoff, and therefore soil loss, an equilibrium between irrigation design (intensity, duration, water pattern) and hydric needs of the crops should be

  13. Numerical simulation of a natural gradient tracer experiment for the natural attenuation study: flow and physical transport.

    PubMed

    Julian, H E; Boggs, J M; Zheng, C; Feehley, C E

    2001-01-01

    Results are presented for numerical simulations of ground water flow and physical transport associated with a natural gradient tracer experiment conducted within a heterogeneous alluvial aquifer of the Natural Attenuation Study (NATS) site near Columbus, Mississippi. A principal goal of NATS is to evaluate biogeochemical models that predict the rate and extent of natural biodegradation under field conditions. This paper describes the initial phase in the model evaluation process, i.e., calibration of flow and physical transport models that simulate conservative bromide tracer plume evolution during NATS. An initial large-scale flow model (LSM) is developed encompassing the experimental site and surrounding region. This model is subsequently scaled down in telescopic fashion to an intermediate-scale ground water flow model (ISM) covering the tracer-monitoring network, followed by a small-scale transport model (SSM) focused on the small region of hydrocarbon plume migration observed during NATS. The LSM uses inferred depositional features of the site in conjunction with hydraulic conductivity (K) data from aquifer tests and borehole flowmeter tests to establish large-scale K and flow field trends in and around the experimental site. The subsequent ISM incorporates specified flux boundary conditions and large-scale K trends obtained from the calibrated LSM, while preserving small-scale K structure based on some 4000 flowmeter data for solute transport modeling. The configuration of the ISM-predicted potentiometric surface approximates that of the observed surface within a root mean squared error of 0.15 m. The SSM is based on the dual-domain mass-transfer approach. Despite the well-recognized difficulties in modeling solute transport in extremely heterogeneous media as found at the NATS site, the dual-domain model adequately reproduced the observed bromide concentration distributions. Differences in observed and predicted bromide concentration distributions are

  14. Cereal grain, rachis and pulse seed amino acid δ15N values as indicators of plant nitrogen metabolism.

    PubMed

    Styring, Amy K; Fraser, Rebecca A; Bogaard, Amy; Evershed, Richard P

    2014-01-01

    Natural abundance δ(15)N values of plant tissue amino acids (AAs) reflect the cycling of N into and within plants, providing an opportunity to better understand environmental and anthropogenic effects on plant metabolism. In this study, the AA δ(15)N values of barley (Hordeum vulgare) and bread wheat (Triticum aestivum) grains and rachis and broad bean (Vicia faba) and pea (Pisum sativum) seeds, grown at the experimental farm stations of Rothamsted, UK and Bad Lauchstädt, Germany, were determined by GC-C-IRMS. It was found that the δ(15)N values of cereal grain and rachis AAs could be largely attributed to metabolic pathways involved in their biosynthesis and catabolism. The relative (15)N-enrichment of phenylalanine can be attributed to its involvement in the phenylpropanoid pathway and glutamate has a δ(15)N value which is an average of the other AAs due to its central role in AA-N cycling. The relative AA δ(15)N values of broad bean and pea seeds were very different from one another, providing evidence for differences in the metabolic routing of AAs to the developing seeds in these leguminous plants. This study has shown that AA δ(15)N values relate to known AA biosynthetic pathways in plants and thus have the potential to aid understanding of how various external factors, such as source of assimilated N, influence metabolic cycling of N within plants.

  15. Fluorescent particle tracers for surface hydrology: development of a sensing station for field studies

    NASA Astrophysics Data System (ADS)

    Capocci, I.; Mocio, G.; Insogna, F.; Tauro, F.; Petroselli, A.; Rapiti, R.; Cipollari, G.; Grimaldi, S.; Porfiri, M.

    2012-04-01

    This work focuses on the development and testing of a sensing station for the detection and tracking of a new class of fluorescent particle tracers for surface hydrology. This tracing methodology is based on the release of microspheres that fluoresce at labeled wavelengths in natural streams. The particles are detected as they transit below a sensing station that comprises a light source and a digital camera. Video feed from the station is then processed to obtain direct flow measurements and stream reach travel times. This novel tracing technology is a low-cost measurement system that can be implemented on a variety of real-world settings, spanning from small scale streams to few centimeters rills in natural hillslopes. In particular, the use of insoluble buoyant particles limits the tracer dispersion from adhesion to natural substrates and thus minimizes the amount of tracing material for experimental measurements. Further, particle enhanced fluorescence allows for non-intrusively detecting the tracer without deploying probes and samplers in the water. The performance of the sensing station is assessed by conducting a large array of experiments under different flow and acquisition conditions. More specifically, experiments are performed for multiple flow velocities, camera acquisition frequencies, light sources, and distances of the sensing station from the flow surface. Particles are deployed in a custom built artificial water channel of adjustable slope to simulate varying flow conditions. A high definition bullet camera is used to detect particles that fluoresce either in green or red and two optical filters, corresponding to the emission wavelengths of the particles, are incorporated in the sensing station. In this implementation, green emission is elicited by using Ultra Violet lights, while white light drives the red emission. Experimental results confirm the versatility and the effectiveness of the proposed methodology. Both particle types are found to be

  16. Glacial-interglacial dynamics of Antarctic firn columns: comparison between simulations and ice core air-?15N measurements

    NASA Astrophysics Data System (ADS)

    Capron, E.; Landais, A.; Buiron, D.; Cauquoin, A.; Chappellaz, J. A.; Debret, M.; Jouzel, J.; Leuenberger, M.; Martinerie, P.; Masson-Delmotte, V.; Mulvaney, R.; Parrenin, F.; Prié, F.

    2013-12-01

    Correct estimation of the firn lock-in depth is essential for correctly linking gas and ice chronologies in ice core studies. Here, two approaches to constrain the firn depth evolution in Antarctica are presented over the last deglaciation: outputs of a firn densification model, and measurements of δ15N of N2 in air trapped in ice core, assuming that δ15N is only affected by gravitational fractionation in the firn column. Since the firn densification process is largely governed by surface temperature and accumulation rate, we have investigated four ice cores drilled in coastal (Berkner Island, BI, and James Ross Island, JRI) and semi-coastal (TALDICE and EPICA Dronning Maud Land, EDML) Antarctic regions. Combined with available ice core air- δ15N measurements from the EPICA Dome C (EDC) site, the studied regions encompass a large range of surface accumulation rates and temperature conditions. Our δ15N profiles reveal a heterogeneous response of the firn structure to glacial-interglacial climatic changes. While firn densification simulations correctly predict TALDICE δ15N variations, they systematically fail to capture the large millennial-scale δ15N variations measured at BI and the δ15N glacial levels measured at JRI and EDML - a mismatch previously reported for central East Antarctic ice cores. New constraints of the EDML gas-ice depth offset during the Laschamp event (41 ka) and the last deglaciation do not favour the hypothesis of a large convective zone within the firn as the explanation of the glacial firn model- δ15N data mismatch for this site. While we could not conduct an in-depth study of the influence of impurities in snow for firnification from the existing datasets, our detailed comparison between the δ15N profiles and firn model simulations under different temperature and accumulation rate scenarios suggests that the role of accumulation rate may have been underestimated in the current description of firnification models.

  17. Glacial-interglacial dynamics of Antarctic firn columns: comparison between simulations and ice core air-δ15N measurements

    NASA Astrophysics Data System (ADS)

    Capron, E.; Landais, A.; Buiron, D.; Cauquoin, A.; Chappellaz, J.; Debret, M.; Jouzel, J.; Leuenberger, M.; Martinerie, P.; Masson-Delmotte, V.; Mulvaney, R.; Parrenin, F.; Prié, F.

    2013-05-01

    Correct estimation of the firn lock-in depth is essential for correctly linking gas and ice chronologies in ice core studies. Here, two approaches to constrain the firn depth evolution in Antarctica are presented over the last deglaciation: outputs of a firn densification model, and measurements of δ15N of N2 in air trapped in ice core, assuming that δ15N is only affected by gravitational fractionation in the firn column. Since the firn densification process is largely governed by surface temperature and accumulation rate, we have investigated four ice cores drilled in coastal (Berkner Island, BI, and James Ross Island, JRI) and semi-coastal (TALDICE and EPICA Dronning Maud Land, EDML) Antarctic regions. Combined with available ice core air-δ15N measurements from the EPICA Dome C (EDC) site, the studied regions encompass a large range of surface accumulation rates and temperature conditions. Our δ15N profiles reveal a heterogeneous response of the firn structure to glacial-interglacial climatic changes. While firn densification simulations correctly predict TALDICE δ15N variations, they systematically fail to capture the large millennial-scale δ15N variations measured at BI and the δ15N glacial levels measured at JRI and EDML - a mismatch previously reported for central East Antarctic ice cores. New constraints of the EDML gas-ice depth offset during the Laschamp event (~41 ka) and the last deglaciation do not favour the hypothesis of a large convective zone within the firn as the explanation of the glacial firn model-δ15N data mismatch for this site. While we could not conduct an in-depth study of the influence of impurities in snow for firnification from the existing datasets, our detailed comparison between the δ15N profiles and firn model simulations under different temperature and accumulation rate scenarios suggests that the role of accumulation rate may have been underestimated in the current description of firnification models.

  18. Compound-specific δ15N and chlorin preservation in surface sediments of the Peru Margin with implications for ancient bulk δ15N records

    NASA Astrophysics Data System (ADS)

    Junium, Christopher K.; Arthur, Michael A.; Freeman, Katherine H.

    2015-07-01

    Understanding the processes that control the preservation of paleoceanographic proxies is of clear importance. Surface sediments from the Peru Margin oxygen-minimum zone are subject to lateral and downslope transport by bottom currents that decrease organic matter (OM) quality. Indicators of bulk OM quality (pyrolysis hydrogen index, pyrolysis S1 + S2 and C/N) demonstrate significant degradation between 150 and 400 m water depth, within the oxygen-minimum zone. Concentrations of the three most abundant chlorins (chlorophyllone, pheophytin and pyropheophytin) decrease from 750 to 150 nmol g TOC-1 from 150 to 400 m water depth though the relative abundances of the chlorins in an individual sample do not change. This suggests that the three chlorins have similar reactivity over the ambient conditions. Values for δ15N of bulk sediments (δ15Nbulk) decrease by 3‰ from the inner shelf to the upper slope (1000 m) but co-occurring compound-specific δ15N values (δ15Nchlorin) do not decrease downslope. The low variability of δ15Nchlorin values supports a single source for the chlorins, and demonstrates the recalcitrance of δ15Nchlorin values despite degradation. This set of observation raises questions about which type of OM fraction best records 'primary' signatures. We assess two possible models to guide our interpretation of these disparate datasets (1) that decreasing δ15Nbulk values are the result of degradation of a 15N-enriched fraction during downslope transport, and that δ15Nchlorin values reflect primary values; (2) that δ15Nbulk values are primary and that chlorins are derived from material transported from upslope. These data reaffirm that in active sedimentary environments such as the Eastern Tropical Pacific, transport of OM can significantly alter bulk geochemical parameters of OM integrity, but the impacts on the δ15N record of bulk sediments and chlorins are less clear, and require more study to be thoroughly understood.

  19. Synthesis of 15 alpha-hydroxyestrogen 15-N-acetylglucosaminides.

    PubMed

    Suzuki, E; Namba, S; Kurihara, H; Goto, J; Matsuki, Y; Nambara, T

    1995-03-01

    The synthesis of 15-N-acetylglucosaminides of 15 alpha-hydroxyesterone, 15 alpha-hydroxyestradiol, and 15 alpha-hydroxyestriol (estetrol) is described. The latter two were prepared by condensation of 2-acetamido-1 alpha-chloro-1,2-dideoxy-3,4,6-trio-O-acetyl-D-glucopyranose with appropriately protected 15 alpha-hydroxyestrogens by the Koenigs-Knorr reaction employing cadmium carbonate as a catalyst. Subsequent removal of protecting groups with methanolic potassium hydroxide provided the desired conjugates. 15 alpha-Hydroxyestrone 15-N-acetylglucosaminide was synthesized from the corresponding 15 alpha-hydroxyestradiol derivative by Jones oxidation followed by brief alkaline hydrolysis. These conjugates underwent enzymatic hydrolysis with beta-N-acetylglucosaminidase from Jack beans to produce 15 alpha-hydroxyestrogens. PMID:7792832

  20. The potential of silica encapsulated DNA magnetite microparticles (SiDNAMag) for multi-tracer studies in subsurface hydrology

    NASA Astrophysics Data System (ADS)

    Willem Foppen, Jan; Bogaard, Thom; van Osnabrugge, Bart; Puddu, Michela; Grass, Robert

    2015-04-01

    With tracer experiments, knowledge on solute transport, travel times, flow pathways, source areas, and linkages between infiltration and exfiltration zones in subsurface hydrological studies can be obtained. To overcome the well-known limitations of artificial tracers, we report here the development and application of an inexpensive method to produce large quantities of environmentally friendly 150-200 nm microparticles composed of a magnetite core to which small fragments of synthetic 80 nt ssDNA were adsorbed, which were then covered by a layer of inert silica (acronym: SiDNAMag). The main advantages of using DNA are the theoretically unlimited amount of different DNA tracers and the low DNA detection limit using the quantitative polymerase chain reaction (qPCR); the main advantage of the silica layer is to prevent DNA decay, while the magnetite core facilitates magnetic separation, recovery and up-concentration. In 10 cm columns of saturated quartz sand, we first injected NaCl, a conservative salt tracer, and measured the breakthrough. Then, we injected SiDNAMag suspended in water of known composition, harvested the SiDNAMag in column effluent samples, and measured the DNA concentration via qPCR after dissolving the SiDNAMag. The results indicated that the timing of the rising limb of the DNA breakthrough curve, the plateau phase and the falling limb were identical to the NaCl breakthrough curve. However, the relative maximum DNA concentration reached during the plateau phase was around 0.3, indicating that around 70% of the SiDNAMag mass was retained in the column. From these results we inferred that SiDNAMag was not retarded and therefore not subject to equilibrium sorption. Instead, first order irreversible kinetic attachment appeared to be the dominant retention mechanism. Based on our results, we speculate that, despite significant retention, due to the low DNA detection limit and the possibility of magnetic up-concentration, the use of SiDNAMag is a very

  1. Diffusion technique for 15N and inorganic N analysis of low-N aqueous solutions and Kjeldahl digests.

    PubMed

    Chen, Rui Rui; Dittert, Klaus

    2008-06-01

    Diffusion of ammonia is a common sample preparation method for the stable isotope analysis of inorganic nitrogen in aqueous solution. Classical diffusion methods usually require 6-12 days of diffusion and often focus on (15)N/(14)N analysis only. More recent studies have discussed whether complete N recovery was necessary for the precise analysis of stable N isotope ratios. In this paper we present a newly revised diffusion technique that allows correct and simultaneous determination of total N and (15)N at% from aqueous solutions and Kjeldahl digests, with N concentrations down to sub-0.5-mg N L(-1) levels, and it is tested under different conditions of (15)N isotope labelling. With the modification described, the diffusion time was reduced to 72 h, while the ratios of measured and expected (15)N at% were greater than 99% and the simultaneous recovery of total N was >95%. Analysis of soil microbial biomass N and its (15)N/(14)N ratio is one of the most important applications of this diffusion technique. An experiment with soil extracts spiked with (15)N-labelled yeast showed that predigestion was necessary to prevent serious N loss during Kjeldahl digestion of aqueous samples (i.e. soil extracts). The whole method of soil microbial biomass N preparation for (15)N/(14)N analysis included chloroform fumigation, predigestion, Kjeldahl digestion and diffusion. An experiment with soil spiked with (15)N-labelled yeast was carried out to evaluate the method. Results showed a highly significant correlation of recovered and added N, with the same recovery rate (0.21) of both total N and (15)N. A k(N) value of 0.25 was obtained based on the data. In conclusion, the diffusion method works for soil extracts and microbial biomass N determination and hence could be useful in many types of soil/water studies.

  2. Plant and soil natural abundance delta (15)N: indicators of relative rates of nitrogen cycling in temperate forest ecosystems.

    PubMed

    Templer, Pamela H; Arthur, Mary A; Lovett, Gary M; Weathers, Kathleen C

    2007-08-01

    Watersheds within the Catskill Mountains, New York, receive among the highest rates of nitrogen (N) deposition in the northeastern United States and are beginning to show signs of N saturation. Despite similar amounts of N deposition across watersheds within the Catskill Mountains, rates of soil N cycling and N retention vary significantly among stands of different tree species. We examined the potential use of delta (15)N of plants and soils as an indicator of relative forest soil N cycling rates. We analyzed the delta (15)N of foliage, litterfall, bole wood, surface litter layer, fine roots and organic soil from single-species stands of American beech (Fagus grandifolia), eastern hemlock (Tsuga canadensis), red oak (Quercus rubra), and sugar maple (Acer saccharum). Fine root and organic soil delta (15)N values were highest within sugar maple stands, which correlated significantly with higher rates of net mineralization and nitrification. Results from this study suggest that fine root and organic soil delta (15)N can be used as an indicator of relative rates of soil N cycling. Although not statistically significant, delta (15)N was highest within foliage, wood and litterfall of beech stands, a tree species associated with intermediate levels of soil N cycling rates and forest N retention. Our results show that belowground delta (15)N values are a better indicator of relative rates of soil N cycling than are aboveground delta (15)N values.

  3. Estimation of internal and external nitrogen for corals with a long-term 15N-labelling experiment and subsequent model calculations

    NASA Astrophysics Data System (ADS)

    Tanaka, Yasuaki; Grottoli, Andréa; Matsui, Yohei; Suzuki, Atsushi; Sakai, Kazuhiko

    2014-05-01

    Coral reef ecosystems maintain high primary productivity though the seawater is extremely oligotrophic. One of the hypotheses to explain this paradox is the recycling of nutrients in animal-algal symbiotic organisms such as corals. It is relatively easy to measure nutrient uptake rates by corals from seawater, but the proportion of internally circulating nutrients between the coral host and the endosymbiotic algae (zooxanthellae) is more challenging. Here, we performed a long-term and continuous 15N-labelling experiment to quantify the proportionate contribution of seawater (external N source) and the animal host (internal N source) to the total N influx in the endosymbiotic algae. Branches from the scleractinian corals Porites cylindrica and Montipora digitata from Okinawa, Japan, were cultured for 2 months in indoor, flow-through, filtered seawater tanks with the continuous supply of 15N-labelled nitrate. At the initial and after 2, 4, and 9 weeks of the study, coral branches were collected and the algal and animal fractions were separated for isotopic analyses. In both corals, the N isotope ratio of symbiotic algae exponentially increased and the values were much higher than those of the host tissue, suggesting that the algae had a faster turnover N time than the animal host. Algal and host N biomass normalized to the coral surface area slowly decreased in both coral species over the study period. To calculate the contribution of internal and external N, a simple mixing model of algal N metabolism was designed. Using differential equations of 15N balance and N biomass balance, F1 and F2 (external and internal N fluxes to symbiotic algae, respectively) were expressed as the functions of time. The model calculations showed that F2 was much higher than F1 in P. cylindrica and the percentage of internal N to the total influx N (PIN) was >70%. On the other hand, the contribution of F1 and F2 was comparable in M. digitata and the PIN was 40-70%. These results

  4. Marking Drosophila suzukii (Diptera: Drosophilidae) With Rubidium or 15N.

    PubMed

    Klick, J; Yang, W Q; Bruck, D J

    2015-06-01

    Drosophila suzukii Matsumura (Diptera: Drosophilidae) has caused significant economic damage to berry and stone fruit production regions. Markers that are systemic in plants and easily transferred to target organisms are needed to track D. suzukii exploitation of host resources and trophic interactions. High and low concentrations of the trace element, rubidium (Rb), and the stable isotope, 15N, were tested to mark D. suzukii larvae feeding on fruits of enriched strawberry plants grown in containers under greenhouse conditions. Fly marker content and proportion of flies marked 1, 7, and 14 d after emergence from enriched fruits and fly dry mass were analyzed. Nearly 100% of the flies analyzed 14 d after emerging from 15N-enriched plants were marked, whereas only 30-75% and 0-3% were marked 14 d after emerging from high and low Rb concentration plants, respectively. Rapid Rb decay, strong 15N persistence, and the economics of using these markers in the field to elucidate D. suzukii pest ecology are discussed. PMID:26470275

  5. 15N chemical shift referencing in solid state NMR.

    PubMed

    Bertani, Philippe; Raya, Jésus; Bechinger, Burkhard

    2014-01-01

    Solid-state NMR spectroscopy has much advanced during the last decade and provides a multitude of data that can be used for high-resolution structure determination of biomolecules, polymers, inorganic compounds or macromolecules. In some cases the chemical shift referencing has become a limiting factor to the precision of the structure calculations and we have therefore evaluated a number of methods used in proton-decoupled (15)N solid-state NMR spectroscopy. For (13)C solid-state NMR spectroscopy adamantane is generally accepted as an external standard, but to calibrate the (15)N chemical shift scale several standards are in use. As a consequence the published chemical shift values exhibit considerable differences (up to 22 ppm). In this paper we report the (15)N chemical shift of several commonly used references compounds in order to allow for comparison and recalibration of published data and future work. We show that (15)NH4Cl in its powdered form (at 39.3 ppm with respect to liquid NH3) is a suitable external reference as it produces narrow lines when compared to other reference compounds and at the same time allows for the set-up of cross-polarization NMR experiments. The compound is suitable to calibrate magic angle spinning and static NMR experiments. Finally the temperature variation of (15)NH4Cl chemical shift is reported.

  6. δ15N as a proxy for historic anthropogenic nitrogen loading in Charleston Harbor, SC, USA

    NASA Astrophysics Data System (ADS)

    Payne, T. N.; Andrus, C. F. T.

    2015-12-01

    Bivalve shell geochemistry can serve as a useful indicator of changes in coastal environments. There is increasing interest in developing paleoenvironmental proxies from mollusk shell organic components. Numerous studies have focused on how the δ15N obtained from bivalve tissues can be used to trace present-day wastewater input into estuaries. However, comparatively little attention has been paid to tracing the impact of anthropogenic nitrogen loading into estuaries over time. By measuring historic levels of δ15N in the organic fraction of oyster shells (Crassostrea virginica) from archaeological sites around Charleston Harbor and comparing those levels to the δ15N content of modern shells, it is possible to assess how nitrogen has fluctuated historically in the area. Whole-shell samples from the Late Archaic Period (~3000-4000 BP, Late Woodland Period (~1400-800 BP), 18th and 19th centuries, and modern controls were measured for %N and d15N. Evidence of increased anthropogenic input of N is expected to begin in the early historic period based on similar analysis in Chesapeake Bay. More ancient samples may give insight into baseline conditions prior to recent population growth and industrialization. This information could help understand how large-scale anthropogenic nitrogen loading has affected coastal ecosystems over time and guide future remediation. Furthermore, this project will help refine and improve this novel proxy of past environmental conditions.

  7. The use of delta(15)N in assessing sewage stress on coral reefs.

    PubMed

    Risk, Michael J; Lapointe, Brian E; Sherwood, Owen A; Bedford, Bradley J

    2009-06-01

    While coral reefs decline, scientists argue, and effective strategies to manage land-based pollution lag behind the extent of the problem. There is need for objective, cost-effective, assessment methods. The measurement of stable nitrogen isotope ratios, delta(15)N, in tissues of reef organisms shows promise as an indicator of sewage stress. The choice of target organism will depend upon study purpose, availability, and other considerations such as conservation. Algae are usually plentiful and have been shown faithfully to track sewage input. The organic matrix of bivalve shells can provide time series spanning, perhaps, decades. Gorgonians have been shown to track sewage, and can provide records potentially centuries-long. In areas where baseline data are lacking, which is almost everywhere, delta(15)N in gorgonians can provide information on status and trends. In coral tissue, delta(15)N combined with insoluble residue determination can provide information on both sewage and sediment stress in areas lacking baseline data. In the developed world, delta(15)N provides objective assessment in a field complicated by conflicting opinions. Sample handling and processing are simple and analysis costs are low. This is a method deserving widespread application.

  8. Tracer dating and ocean ventilation

    SciTech Connect

    Thiele, G.; Sarmiento, J.L. )

    1990-06-15

    The interpretation of transient tracer observations depends on difficult to obtain information on the evolution in time of the tracer boundary conditions and interior distributions. Recent studies have attempted to circumvent this problem by making use of a derived quantity, age, based on the simultaneous distribution of two complementary tracers, such as tritium and its daughter, helium 3. The age is defined with reference to the surface such that the boundary condition takes on a constant value of zero. The authors use a two-dimensional model to explore the circumstances under which such a combination of conservation equations for two complementary tracers can lead to a cancellation of the time derivative terms. An interesting aspect of this approach is that mixing can serve as a source or sink of tracer based age. The authors define an idealized ventilation age tracer that is conservative with respect to mixing, and they explore how its behavior compares with that of the tracer-based ages over a range of advective and diffusive parameters.

  9. Vertical δ13C and δ15N changes during pedogenesis

    NASA Astrophysics Data System (ADS)

    Brunn, Melanie; Spielvogel, Sandra; Wells, Andrew; Condron, Leo; Oelmann, Yvonne

    2015-04-01

    The natural abundance of soil organic matter (SOM) stable C and N isotope ratios are subjected to vertical changes throughout the soil profile. This vertical distribution is a widely reported phenomenon across varieties of ecosystems and constitutes important insights of soil carbon cycling. In most ecosystems, SOM becomes enriched in heavy isotopes by several per mill in the first few centimeters of the topsoil. The enrichment of 13C in SOM with soil depth is attributed to biological and physical-chemical processes in soil e.g., plant physiological impacts, microbial decomposition, sorption and transport processes. Such vertical trends in 13C and 15N abundance have rarely been related to SOM composition during pedogenesis. The aims of our study were to investigate short and long-term δ13C and δ15N depth changes and their interrelations under progressing pedogenesis and ecosystem development. We sampled soils across the well studied fordune progradation Haast-chronosequence, a dune ridge system under super-humid climate at the West Coast of New Zealand's South Island (43° 53' S, 169° 3' E). Soils from 11 sites with five replicates each covered a time span of around 2870 yr of soil development (from Arenosol to Podzol). Vertical changes of δ13C and δ15N values of SOM were investigated in the organic layers and in 1-cm depth intervals of the upper 10 cm of the mineral soil. With increasing soil depth SOM became enriched in δ13C by 1.9 ± SE 0.1 o and in δ15N by 6.0 ± 0.4 ‰˙Litter δ13C values slightly decreased with increasing soil age (r = -0.61; p = 0.00) likely due to less efficient assimilation linked to nutrient limitations. Fractionation processes during mycorrhizal transfer appeared to affect δ15N values in the litter. We found a strong decrease of δ15N in the early succession stages ≤ 300 yr B.P. (r = -0.95; p = 0.00). Positive relations of vertical 13C and 15N enrichment with soil age might be related to decomposition and appeared to be

  10. Feasibility study of silver iodide smoke as an atmospheric dispersion tracer for Rocky Flats Plant site, July 1983-December 1984

    SciTech Connect

    Langer, G.

    1986-09-22

    At Rocky Flats Plant, we developed a technique that employs the release of silver iodide (AgI) smoke as a very economical tracer for air dispersion around the Plant. In an emergency, the AgI smoke would trace a contaminant plume over long distances, in real time, to guide emergency response. To test this technique, we experimented with first releasing AgI smoke particles, then tracking them up to 50 km from the Plant by vehicle and aircraft under various typical weather conditions. Able to detect single AgI particles as small as 0.01 ..mu..m in real time, a portable cloud chamber operated on either a pickup truck or a small aircraft. For both procedures, a simple smoke generator operating unattended produced up to 1 x 10/sup 15/ particles/g of AgI. Ground tracking of the smoke (1) showed the influence on dispersion by the midday shift from downslope to upslope flow during stable conditions and (2) provided an interesting case study of a nearby thunderstorm as a transient effect. Aerial tracking during eight flights covered a wide range of meteorological conditions. Convective flow often lofted the smoke completely off the ground before it left the Plant boundary. During inversion conditions, the tracer remained within 100 m of the ground.

  11. Localization of 15N uptake in a Tibetan alpine Kobresia pasture

    NASA Astrophysics Data System (ADS)

    Schleuß, Per-Marten; Kuzyakov, Yakov

    2014-05-01

    The Kobresia Pygmea ecotone covers approximately 450.000 km2 and is of large global and regional importance due several socio-ecological aspects. For instance Kobresia pastures store high amounts of carbon, nitrogen and other nutrients, represent large grazing areas for herbivores, provide a fast regrowth after grazing events and protect against mechanical degradation and soil erosion. However, Kobresia pastures are assumed to be a grazing induced and are accompanied with distinct root mats varying in thickness between 5-30 cm. Yet, less is known about the morphology and the functions of this root mats, especially in the background of a progressing degradation due to changes of climate and management. Thus we aimed to identify the importance of single soil layers for plant nutrition. Accordingly, nitrogen uptake from different soil depths and its remain in above-ground biomass (AGB), belowground biomass (BGB) and soil were determined by using a 15N pulse labeling approach during the vegetation period in summer 2012. 15N urea was injected into six different soil depths (0.5 cm, 2.5 cm, 7.5 cm, 12.5 cm, 17.5 cm, 22.5 cm / for each 4 replicates) and plots were sampled 45 days after the labeling. For soil and BGB samples were taken in strict sample intervals of 0-1 cm, 1-5 cm, 5-10 cm, 10-15 cm, 15-20 cm, 20-25 cm. Results indicate that total recovery (including AGB, BGB and soil) was highest, if tracer was injected into the top 5 cm and subsequently decreased with decreasing injection depth. This is especially the case for the 15N recovery of BGB, which is clearly attributed to the root density and strongly decreased with soil depth. In contrast, the root activity derived from the 15N content of roots increased with soil depth, which is primary associated to a proportionate increase of living roots related to dead roots. However, most 15N was captured in plant biomass (67.5-85.3 % of total recovery), indicating high 15N uptake efficiency possibly due to N limitation

  12. Birth Outcomes in a Prospective Pregnancy–Birth Cohort Study of Environmental Risk Factors in Kuwait: The TRACER Study

    PubMed Central

    AlSeaidan, Mohammad; Al Wotayan, Rihab; Christophi, Costas A.; Al-Makhseed, Massouma; Awad, Yara Abu; Nassan, Feiby; Ahmed, Ayah; Abraham, Smitha; Boley, Robert Bruce; James-Todd, Tamarra; Wright, Rosalind J.; Dockery, Douglas W.; Behbehani, Kazem

    2016-01-01

    Background Rapid development and westernisation in Kuwait and other Gulf states have been accompanied by rising rates of obesity, diabetes, asthma, and other chronic conditions. Prenatal experiences and exposures may be important targets for intervention. We undertook a prospective pregnancy–birth cohort study in Kuwait, the TRansgenerational Assessment of Children’s Environmental Risk (TRACER) Study, to examine prenatal risk factors for early childhood obesity. This article describes the methodology and results of follow-up through birth. Methods Women were recruited at antenatal clinical visits. Interviewers administered questionnaires during the pregnancy and collected and banked biological samples. Children are being followed up with quarterly maternal interviews, annual anthropometric measurements, and periodic collection of biosamples. Frequencies of birth outcomes (i.e. stillbirth, preterm birth, small and large for gestational age, and macrosomia) were calculated as a function of maternal characteristics and behaviours. Results Two thousand four hundred seventy-eight women were enrolled, and 2254 women were followed to delivery. Overall, frequencies of stillbirth (0.6%), preterm birth (9.3%), and small for gestational age (7.4%) were comparable to other developed countries, but not strongly associated with maternal characteristics or behaviours. Macrosomia (6.1%) and large for gestational age (23.0%) were higher than expected and positively associated with pre-pregnancy maternal overweight/obesity. Conclusions A large birth cohort has been established in Kuwait. The collected risk factors and banked biosamples will allow examination of the effects of prenatal exposures on the development of chronic disease in children. Initial results suggest that maternal overweight/obesity before pregnancy should be targeted to prevent macrosomia and its associated sequelae of childhood overweight/obesity. PMID:27193754

  13. Evaluating δ(15)N-body size relationships across taxonomic levels using hierarchical models.

    PubMed

    Reum, Jonathan C P; Marshall, Kristin N

    2013-12-01

    Ecologists routinely set out to estimate the trophic position of individuals, populations, and species composing food webs, and nitrogen stable isotopes (δ(15)N) are a widely used proxy for trophic position. Although δ(15)N values are often sampled at the level of individuals, estimates and confidence intervals are frequently sought for aggregations of individuals. If individual δ(15)N values are correlated as an artifact of sampling design (e.g., clustering of samples in space or time) or due to intrinsic groupings (e.g., life history stages, social groups, taxonomy), such estimates may be biased and exhibit overly optimistic confidence intervals. However, these issues can be accommodated using hierarchical modeling methods. Here, we demonstrate how hierarchical models offer an additional quantitative tool for investigating δ(15)N variability and we explicitly evaluate how δ(15)N varies with body size at successively higher levels of taxonomic aggregation in a diverse fish assemblage. The models take advantage of all available data, better account for uncertainty in parameters estimates, may improve inferences on coefficients corresponding to groups with small to moderate sample sizes, and partition variation across model levels, which provides convenient summaries of the 'importance' of each level in terms of unexplained heterogeneity in the data. These methods can easily be applied to diet-based studies of trophic position. Although hierarchical models are well-understood and established tools, their benefits have yet to be fully reaped by stable isotope and food web ecologists. We suggest that hierarchical models can provide a robust framework for conceptualizing and statistically modeling trophic position at multiple levels of aggregation. PMID:23812110

  14. A tracer study of ventilation in the Japan/East Sea

    NASA Astrophysics Data System (ADS)

    Postlethwaite, C. F.; Rohling, E. J.; Jenkins, W. J.; Walker, C. F.

    2005-06-01

    During the Circulation Research in East Asian Marginal Seas (CREAMS) summer cruises in 1999, a suite of samples was collected for tracer analysis. Oxygen isotopes combined with tritium-helium ventilation timescales and noble gas measurements give unique insights into the ventilation of water masses in the Japan/East Sea (JES). In particular, noble gases and oxygen isotopes are indicators of brine rejection, which may assist in explaining the recent changes observed in the ventilation of the JES. Oxygen isotope data presented here indicate that both thermally driven convection and brine rejection have played significant roles in deep-water formation but that brine rejection is unlikely to be a significant contributor at the moment. A 6-box ventilation model of the JES, calibrated with tritium and helium-3 measurements, performed better when a significant decrease of dense-water formation rates in the mid-1960s was incorporated. However, the model calculations suggest that Japan Sea Intermediate Water formation is still occurring. Subduction of sea-ice melt water may be a significant ventilation mechanism for this water mass, based on an argon saturation minimum at the recently ventilated salinity minimum in the northwestern sector of the JES. The salinity and oxygen isotope budgets imply a potential bottom-water formation rate of 3.97±0.89×10 12 m 3 yr -1 due to brine rejection, which could account for a time averaged fraction of between 25% and 35% of the ventilation of subsurface water formation in the JES.

  15. Radioisotope tracer studies of inorganic carbon and Ca in microbially derived CaCO3

    USGS Publications Warehouse

    Yates, Kimberly K.; Robbins, Lisa L.

    1999-01-01

    Microbial calcification significantly impacts the cycling and deposition of inorganic carbon. This research employs 45Ca and 14C techniques as radioisotopic tracers to examine the role of cellular cycling of Ca2+ and inorganic carbon in CaCO3 precipitation by the unicellular green alga Nannochloris atomus. Implications of the effects of these physiological aspects on CaCO3 precipitation and the effects of microbial calcification on CaCO3 δ13C ratios are discussed. Results from pulse/chase experiments indicate that intracellular Ca2+ is incorporated into extracellular CaCO3. Intracellular inorganic carbon leaks from cells within 10 to 12 s after injection of unlabelled NaHCO3, providing a source of inorganic carbon for extracellular CaCO3. Cellular expulsion of calcium plays a key role in increasing the CaCO3 saturation state at the site of calcification. The δ13C ratios of microbial carbonates may vary depending on the amount of photorespiratory CO2 incorporated.

  16. Automatic alignment of renal DCE-MRI image series for improvement of quantitative tracer kinetic studies

    NASA Astrophysics Data System (ADS)

    Zikic, Darko; Sourbron, Steven; Feng, Xinxing; Michaely, Henrik J.; Khamene, Ali; Navab, Nassir

    2008-03-01

    Tracer kinetic modeling with dynamic contrast enhanced MRI (DCE-MRI) and the quantification of the kinetic parameters are active fields of research which have the potential to improve the measurement of renal function. However, the strong coronal motion of the kidney in the time series inhibits an accurate assessment of the kinetic parameters. Automatic motion correction is challenging due to the large movement of the kidney and the strong intensity changes caused by the injected bolus. In this work, we improve the quantification results by a template matching motion correction method using a gradient-based similarity measure. Thus, a tedious manual motion correction is replaced by an automatic procedure. The only remaining user interaction is reduced to a selection of a reference slice and a coarse manual segmentation of the kidney in this slice. These steps do not present an overhead to the interaction needed for the assessment of the kinetic parameters. In order to achieve reliable and fast results, we constrain the degrees of freedom for the correction method as far as possible. Furthermore, we compare our method to deformable registration using the same similarity measure. In all our tests, the presented template matching correction was superior to the deformable approach in terms of reliability, leading to more accurate parameter quantification. The evaluation on 10 patient data series with 180-230 images each demonstrate that the quantitative analysis by a two-compartment model can be improved by our method.

  17. Atom exchange between aqueous Fe(II) and goethite: an Fe isotope tracer study.

    PubMed

    Handler, Robert M; Beard, Brian L; Johnson, Clark M; Scherer, Michelle M

    2009-02-15

    The reaction of aqueous Fe(II) with Fe(III) oxides is a complex process, comprising sorption, electron transfer, and in some cases, reductive dissolution and transformation to secondary minerals. To better understand the dynamics of these reactions, we measured the extent and rate of Fe isotope exchange between aqueous Fe(II) and goethite using a 57Fe isotope tracer approach. We observed near-complete exchange of Fe atoms between the aqueous phase and goethite nanorods over a 30-day time period. Despite direct isotopic evidence for extensive mixing between the aqueous and goethite Fe, no phase transformation was observed, nor did the size or shape of the goethite rods change appreciably. High-resolution transmission electron microscopy images, however, appear to indicate that some recrystallization of the goethite particles may have occurred. Near-complete exchange of Fe between aqueous Fe(II) and goethite, coupled with negligible change in the goethite mineralogy and morphology, suggests a mechanism of coupled growth (via sorption and electron transfer) and dissolution at separate crystallographic goethite sites. We propose that sorption and dissolution sites are linked via conduction through the bulk crystal, as was recently demonstrated for hematite. Extensive mixing between aqueous Fe(II) and goethite, a relatively stable iron oxide, has significant implications for heavy metal sequestration and release (e.g., arsenic and uranium), as well as reduction of soil and groundwater contaminants.

  18. A study of the accuracy of neutrally buoyant bubbles used as flow tracers in air

    NASA Technical Reports Server (NTRS)

    Kerho, Michael F.

    1993-01-01

    Research has been performed to determine the accuracy of neutrally buoyant and near neutrally buoyant bubbles used as flow tracers in air. Theoretical, computational, and experimental results are presented to evaluate the dynamics of bubble trajectories and factors affecting their ability to trace flow-field streamlines. The equation of motion for a single bubble was obtained and evaluated using a computational scheme to determine the factors which affect a bubble's trajectory. A two-dimensional experiment was also conducted to experimentally determine bubble trajectories in the stagnation region of NACA 0012 airfoil at 0 deg angle of attack using a commercially available helium bubble generation system. Physical properties of the experimental bubble trajectories were estimated using the computational scheme. These properties included the density ratio and diameter of the individual bubbles. the helium bubble system was then used to visualize and document the flow field about a 30 deg swept semispan wing with simulated glaze ice. Results were compared to Navier-Stokes calculations and surface oil flow visualization. The theoretical and computational analysis have shown that neutrally buoyant bubbles will trace even the most complex flow patterns. Experimental analysis revealed that the use of bubbles to trace flow patterns should be limited to qualitative measurements unless care is taken to ensure neutral buoyancy. This is due to the difficulty in the production of neutrally buoyant bubbles.

  19. Novel and nontraditional use of stable isotope tracers to study metal bioavailability from natural particles.

    PubMed

    Croteau, Marie-Noële; Cain, Daniel J; Fuller, Christopher C

    2013-04-01

    We devised a novel tracing approach that involves enriching test organisms with a stable metal isotope of low natural abundance prior to characterizing metal bioavailability from natural inorganic particles. In addition to circumventing uncertainties associated with labeling natural particles and distinguishing background metals, the proposed "reverse labeling" technique overcomes many drawbacks inherent to using radioisotope tracers. Specifically, we chronically exposed freshwater snails ( Lymnaea stagnalis ) to synthetic water spiked with Cu that was 99.4% (65)Cu to increase the relative abundance of (65)Cu in the snail's tissues from ~32% to >80%. The isotopically enriched snails were then exposed to benthic algae mixed with Cu-bearing Fe-Al particles collected from the Animas River (Colorado), an acid mine drainage impacted river. We used (63)Cu to trace Cu uptake from the natural particles and inferred their bioavailability from calculation of Cu assimilation into tissues. Cu assimilation from these particles was 44%, indicating that 44% of the particulate Cu was absorbed by the invertebrate. This demonstrates that inorganic particulate Cu can be bioavailable. The reverse labeling approach shows great potential in various scientific areas such as environmental contamination and nutrition for addressing questions involving uptake of an element that naturally has multiple isotopes.

  20. Using 15N, 17O, and 18O to determine nitrate sources in the Yellow River, China.

    PubMed

    Liu, Ting; Wang, Fan; Michalski, Greg; Xia, Xinghui; Liu, Shaoda

    2013-01-01

    Many previous studies have used δ(15)N and δ(18)O of nitrate (δ(15)NNO3 and δ(18)ONO3) to determine the nitrate sources in rivers but were subject to substantial uncertainties and limitations, especially associated with evaluating the atmospheric contribution. The Δ(17)O of nitrate (Δ(17)ONO3) has been suggested as an unambiguous tracer of atmospheric NO3(-) and may serve as an additional nitrate source constraint. In the present study, triple nitrate isotopes (δ(15)NNO3, Δ(17)ONO3, and δ(18)ONO3) were used for the first time to assess the sources and sinks of nitrate in the Yellow River (YR) basin, which is the second longest river in China. Results showed that the Δ(17)ONO3 of the water from the YR ranged from 0‰ to 1.6‰ during two normal-water seasons. This suggested that unprocessed atmospheric nitrate accounted for 0-7% of the total nitrate in the YR. The corrected δ(15)NNO3 and δ(18)ONO3 values with atmospheric imprints being removed indicated that the main terrestrial sources of nitrate were sewage/manure effluents in the upstream of the YR and manure/sewage effluents and ammonium/urea-containing fertilizer in the middle and lower reaches which made comparable contributions to the nitrate. In addition, there was a significant positive relationship between δ(15)NNO3 and δ(18)ONO3 values of river water (p < 0.01) which may signal the presence of denitrification. This study indicates that the triple nitrate isotope method is useful for assessing the nitrate sources in rivers, especially for the measurements of atmospheric nitrate contribution.

  1. Rapid dual-tracer PTSM+ATSM PET imaging of tumour blood flow and hypoxia: a simulation study.

    PubMed

    Rust, T C; Kadrmas, D J

    2006-01-01

    Blood flow and hypoxia are interrelated aspects of physiology that affect cancer treatment and response. Cu-PTSM and Cu-ATSM are related PET tracers for blood flow and hypoxia, and the ability to rapidly image both tracers in a single scan would bring several advantages over conventional single-tracer techniques. Using dynamic imaging with staggered injections, overlapping signals for multiple PET tracers may be recovered utilizing information from kinetics and radioactive decay. In this work, rapid dual-tracer PTSM+ATSM PET was simulated and tested as a function of injection delay, order and relative dose for several copper isotopes, and the results were compared relative to separate single-tracer data. Time-activity curves representing a broad range of tumour blood flow and hypoxia levels were simulated, and parallel dual-tracer compartment modelling was used to recover the signals for each tracer. The main results were tested further using a torso phantom simulation of PET tumour imaging. Using scans as short as 30 minutes, the dual-tracer method provided measures of blood flow and hypoxia similar to single-tracer imaging. The best performance was obtained by injecting PTSM first and using a somewhat higher dose for ATSM. Comparable results for different copper isotopes suggest that tracer kinetics with staggered injections play a more important role than radioactive decay in the signal separation process. Rapid PTSM+ATSM PET has excellent potential for characterizing both tumour blood flow and hypoxia in a single, fast scan, provided that technological hurdles related to algorithm development and routine use can be overcome.

  2. A Case Study of the Weather Research and Forecasting Model Applied to the Joint Urban 2003 Tracer Field Experiment. Part 2: Gas Tracer Dispersion

    NASA Astrophysics Data System (ADS)

    Nelson, Matthew A.; Brown, Michael J.; Halverson, Scot A.; Bieringer, Paul E.; Annunzio, Andrew; Bieberbach, George; Meech, Scott

    2016-07-01

    The Quick Urban & Industrial Complex (QUIC) atmospheric transport, and dispersion modelling, system was evaluated against the Joint Urban 2003 tracer-gas measurements. This was done using the wind and turbulence fields computed by the Weather Research and Forecasting (WRF) model. We compare the simulated and observed plume transport when using WRF-model-simulated wind fields, and local on-site wind measurements. Degradation of the WRF-model-based plume simulations was cased by errors in the simulated wind direction, and limitations in reproducing the small-scale wind-field variability. We explore two methods for importing turbulence from the WRF model simulations into the QUIC system. The first method uses parametrized turbulence profiles computed from WRF-model-computed boundary-layer similarity parameters; and the second method directly imports turbulent kinetic energy from the WRF model. Using the WRF model's Mellor-Yamada-Janjic boundary-layer scheme, the parametrized turbulence profiles and the direct import of turbulent kinetic energy were found to overpredict and underpredict the observed turbulence quantities, respectively. Near-source building effects were found to propagate several km downwind. These building effects and the temporal/spatial variations in the observed wind field were often found to have a stronger influence over the lateral and vertical plume spread than the intensity of turbulence. Correcting the WRF model wind directions using a single observational location improved the performance of the WRF-model-based simulations, but using the spatially-varying flow fields generated from multiple observation profiles generally provided the best performance.

  3. Salt tracer experiments in constructed wetland ponds with emergent vegetation: laboratory study on the formation of density layers and its influence on breakthrough curve analysis.

    PubMed

    Schmid, Bernhard H; Hengl, Michael A; Stephan, Ursula

    2004-04-01

    Constructed wetlands are a rapidly expanding and intensively studied wastewater treatment system. One of the main types in use is the free water surface (FWS) wetland or wetland pond. In studies on these ponds, salt tracer experiments are a convenient tool to determine travel time distributions, which are, in turn, related to hydraulic and sedimentation (trapping) as well as nutrient removal efficiencies. Typically, flows encountered in constructed wetland ponds are characterized by low Reynolds numbers, at times even within the laminar flow regime. In such conditions the injection of salt may cause strong density effects, thereby threatening the usefulness of the recorded breakthrough curves. The processes and mechanisms governing the formation of density stratification due to salt tracer injections into wetland ponds with emergent vegetation were studied in the laboratory. The results reported are expected to be useful in the planning of future field tracer experiments.

  4. Variation in foliar [sup 15]N abundance and the availability of soil nitrogen on Walker Branch Watershed

    SciTech Connect

    Garten, C.T. Jr. )

    1993-10-01

    Spatial patterns in natural [sup 15]N abundance ([sigma][sup 15]N) in soil, soil solutions, and non-N[sub 2]-fixing plants were studied in the deciduous forest on Walker Branch Watershed near Oak Ridge, Tennessee. This study was undertaken to test the hypothesis that foliar [sigma][sup 15]N values are related to the availability of inorganic nitrogen in mineral soil. Soils collected in or near valley bottoms on the watershed had higher levels of net nitrogen mineralization and net nitrification potential than those sampled from ridges and slopes. More positive foliar [sigma][sup 15]N values occurred in valley bottoms, which, relative to other positions on the watershed, were characterized by greater availability of soil nitrogen and lower C-to-N ratios in the O[sub 1]-horizon, in the surface mineral soil, and in autumn leaf fall. Although leaf nitrogen concentrations changed significantly over the course of the growing season, there was little seasonal variation in foliar [sigma][sup 15]N values. A hypothesis about the relative importance of different sources of nitrogen to the forest and how nitrogen cycling varies with topography in this nitrogen-deficient ecosystem was derived, in part, from spatial patterns in natural [sup 15]N abundance. There appear to be two processes affecting the topographic patterns in foliar [sup 15]N abundance on this watershed: (1) greater uptake from isotopically heavy pools of inorganic soil nitrogen by plants in valley bottoms, and (2) uptake of isotopically light ammonium-N in atmospheric deposition by plants on ridges and slopes (where the availability of inorganic soil nitrogen to plant roots is more limited). Results from this study indicate that foliar [sigma][sup 15]N values are positively correlated with net nitrification potential in surface soil. 34 refs., 13 figs., 8 tabs.

  5. Modeling of meteorology, tracer transport and chemistry for the Uintah Basin Winter Ozone Studies 2012 and 2013

    NASA Astrophysics Data System (ADS)

    Ahmadov, R.; McKeen, S. A.; Angevine, W. M.; Frost, G. J.; Roberts, J. M.; De Gouw, J. A.; Warneke, C.; Peischl, J.; Brown, S. S.; Edwards, P. M.; Wild, R. J.; Pichugina, Y. L.; Banta, R. M.; Brewer, A.; Senff, C. J.; Langford, A. O.; Petron, G.; Karion, A.; Sweeney, C.; Schnell, R. C.; Johnson, B.; Zamora, R. J.; Helmig, D.; Park, J.; Evans, J.; Stephens, C. R.; Olson, J. B.; Trainer, M.

    2013-12-01

    The Uintah Basin Winter Ozone Studies (UBWOS) field campaigns took place during winter of 2012 and 2013 in the Uintah Basin, Utah. The studies were aimed at characterizing meteorology, emissions of atmospheric constituents and air chemistry in a region abundant with oil and gas production, with associated emissions of various volatile organic compounds (VOCs) and NOx. High ozone pollution events were observed throughout the Uintah Basin during the winter of 2013, but not during the winter of 2012. A clear understanding of the processes leading to high ozone events is still lacking. We present here high spatiotemporal resolution simulations of meteorology, tracer transport and gas chemistry over the basin during January-February, 2012 and 2013 using the WRF/Chem regional photochemical model. Correctly characterizing the meteorology poses unique challenges due to complex terrain, cold-pool conditions, and shallow inversion layers observed during the winter of 2013. We discuss the approach taken to adequately simulate the meteorology over the basin and present evaluations of the modeled meteorology using surface, lidar and tethersonde measurements. Initial simulations use a passive tracer within the model as a surrogate for CH4 released from oil and gas wells. These tracer transport simulations show that concentrations of inert, emitted species near the surface in 2013 were 4-8 times higher than 2012 due to much shallower boundary layers and reduced winds in 2013. This is supported by in-situ measurements of CH4 made at the Horse Pool surface station during the field campaigns. Full photochemical simulations are forced by VOC and NOx emissions that are determined in a top-down approach, using observed emission ratios of VOC and NOx relative to CH4, along with available information of active wells, compressors, and processing plants. We focus on differences in meteorology, temperature, and radiation between the two winters in determining ozone concentrations in the

  6. Evaluation of short-term tracer fluctuations in groundwater and soil air in a two year study

    NASA Astrophysics Data System (ADS)

    Jenner, Florian; Mayer, Simon; Aeschbach, Werner; Weissbach, Therese

    2016-04-01

    The application of gas tracers like noble gases (NGs), SF6 or CFCs in groundwater studies such as paleo temperature determination requires a detailed understanding of the dynamics of reactive and inert gases in the soil air with which the infiltrating water equilibrates. Due to microbial gas consumption and production, NG partial pressures in soil air can deviate from atmospheric air, an effect that could bias noble gas temperatures estimates if not taken into account. So far, such an impact on NG contents in groundwater has not been directly demonstrated. We provide the first long-term study of the above mentioned gas tracers and physical parameters in both the saturated and unsaturated soil zone, sampled continuously for more than two years near Mannheim (Germany). NG partial pressures in soil air correlate with soil moisture and the sum value of O2+CO2, with a maximal significant enhancement of 3-6% with respect to atmospheric air during summer time. Observed seasonal fluctuations result in a mass dependent fractionation of NGs in soil air. Concentrations of SF6 and CFCs in soil air are determined by corresponding fluctuations in local atmospheric air, caused by industrial emissions. Arising concentration peaks are damped with increasing soil depth. Shallow groundwater shows short-term NG fluctuations which are smoothed within a few meters below the water table. A correlation between NG contents of soil air and of groundwater is observable during strong recharge events. However, there is no evidence for a permanent influence of seasonal variations of soil air composition on shallow groundwater. Fluctuating NG contents in shallow groundwater are rather determined by variations of soil temperature and water table level. Our data gives evidence for a further temperature driven equilibration of groundwater with entrapped air bubbles within the topmost saturated zone, which permanently occurs even some years after recharge. Local subsurface temperature fluctuations

  7. Species specific and environment induced variation of δ13C and δ15N in alpine plants

    PubMed Central

    Yang, Yang; Siegwolf, Rolf T. W.; Körner, Christian

    2015-01-01

    Stable carbon and nitrogen isotope signals in plant tissues integrate plant-environment interactions over long periods. In this study, we hypothesized that humid alpine life conditions are narrowing the scope for significant deviations from common carbon, water and nitrogen relations as captured by stable isotope signals. We explored the variation in δ13C and δ15N in 32 plant species from tissue type to ecosystem scale across a suite of locations at c. Two thousand five hundred meter elevation in the Swiss Alps. Foliar δ13C and δ15N varied among species by about 3–4‰ and 7–8‰ respectively. However, there was no overall difference in means of δ13C and δ15N for species sampled in different plant communities or when bulk plant dry matter harvests of different plant communities were compared. δ13C was found to be highly species specific, so that the ranking among species was mostly maintained across 11 habitats. However, δ15N varied significantly from place to place in all species (a range of 2.7‰) except in Fabaceae (Trifolium alpinum) and Juncaceae (Luzula lutea). There was also a substantial variation among individuals of the same species collected next to each other. No difference was found in foliar δ15N of non-legumes, which were either collected next to or away from the most common legume, T. alpinum. δ15N data place Cyperaceae and Juncaceae, just like Fabaceae, in a low discrimination category, well separated from other families. Soil δ15N was higher than in plants and increased with soil depth. The results indicate a high functional diversity in alpine plants that is similar to that reported for low elevation plants. We conclude that the surprisingly high variation in δ13C and δ15N signals in the studied high elevation plants is largely species specific (genetic) and insensitive to obvious environmental cues. PMID:26097487

  8. Olfacto-retinalis pathway in Austrolebias charrua fishes: a neuronal tracer study.

    PubMed

    Rosillo, J C; Olivera-Bravo, S; Casanova, G; García-Verdugo, J M; Fernández, A S

    2013-12-01

    The olfacto-retinal centrifugal system, a constant component of the central nervous system that appears to exist in all vertebrate groups, is part of the terminal nerve (TN) complex. TN allows the integration of different sensory modalities, and its anatomic variability may have functional and evolutionary significance. We propose that the olfacto-retinal branch of TN is an important anatomical link that allows the functional interaction between olfactory and visual systems in Austrolebias. By injecting three different neuronal tracers (biocytin, horseradish peroxidase, and 1,1'-dioctadecyl-3,3,3',3'tetramethyl-indocarbocyanine perchlorate (DiI)) in the left eye of Austrolebias charrua fishes, we identified the olfacto-retinal branch of TN and related neuronal somas that were differentiable by location, shape, and size. The olfacto-retinal TN branch is composed of numerous thin axons that run ventrally along the olfactory bulb (OB) and telencephalic lobes, and appears to originate from a group of many small monopolar neurons located in the rostral portion of both the ipsi- and contralateral OB (referred to as region 1). Labeled cells were found in two other regions: bipolar and multipolar neurons in the transition between the OB and telencephalic lobes (region 2) and two other groups in the preoptic/pretectal area (region 3). In this last region, the most rostral group is constituted by monopolar pear-shaped neurons and may belong to the septo-preoptic TN complex. The second group, putatively located in the pretectal region, is formed by pseudounipolar neurons and coincides with a conserved vertebrate nucleus of the centrifugal retinal system not involved in the TN complex. The found that connections between the olfactory and visual systems via the olfacto-retinal TN branch suggest an early interaction between these sensory modalities, and contribute to the identification of their currently unknown circuital organization.

  9. Effects of climate on deer bone δ15N and δ13C: Lack of precipitation effects on δ15N for animals consuming low amounts of C 4 plants

    NASA Astrophysics Data System (ADS)

    Cormie, A. B.; Schwarcz, H. P.

    1996-11-01

    We have examined the relationship of bone collagen δ15N and δ13C to climatic variables, humidity, temperature, and amount of precipitation using fifty-nine specimens of North American white-tailed deer ( Odocoileus virginianus) from forty-six different locations. In previous studies of African mammals there was a significant correlation between bone collagen δ15N and local amount of precipitation. Results presented here similarly show an increase in δ15N with decreasing amount of precipitation but only for 25% of the animals, namely those consuming more than 10% C 4 plants. These animals also exhibited a significant correlation between δ13C and temperature which mirrors previous observations for grasses suggesting that these deer consume grasses during times of population and nutrient stress. In contrast, even in dry areas containing high proportions of C 4 grasses, the majority of the deer had consumed low amounts of C 4 plants and these deer did not have δ15N which correlate with amount of precipitation. Only when deer deviated from their normal feeding pattern by consuming C 4 plants or grasses did their δ15N correlate with amount of rainfall. For these animals, consumption of C 4 plants or grasses may signal conditions of water and nutrient stress. An increase in δ15N of bone collagen may result from combined effects from excretion of concentrated urine (to conserve water) and increased internal recycling of nitrogen (to conserve nitrogen).

  10. Modeling and interpretation of two-phase flow and tracer studies from a subbituminous coal seam in the San Juan basin of New Mexico

    SciTech Connect

    Nuttall, H.E.; Travis, B.J.

    1980-01-01

    Field and modeling studies were performed to characterize two-phase flow within the natural cleat structure of an upper Cretaceous subbituminous coal seam. A two borehole pattern with open completion was used in a study of dewatering and tracer residence time distribution. Air was pumped into a five meter thick seam located about 170 meters below the surface. Krypton 85 was used as the airborne tracer. Air inflow and air and water production rates and tracer arrival times were monitored. The field tests were simulated with a two-phase, three component, porous flow code. Results showed that the air inflow and air and water outflow rates and breakthrough times could not be modeled assuming a uniform darcy-type permeability. The use of a pressure dependent permeability did provide, however, a much better match with the field data.

  11. A pilot study of the feasibility of long-term human bone balance during perimenopause using a 41Ca tracer

    NASA Astrophysics Data System (ADS)

    Hui, S. K.; Prior, J.; Gelbart, Z.; Johnson, R. R.; Lentle, B. C.; Paul, M.

    2007-06-01

    The mechanisms governing calcium fluxes during bone remodeling processes in perimenopausal women are poorly known. Despite higher, albeit erratic, estradiol levels in perimenopause, spine bone loss is greater than during the first five years past the final menstrual flow when estradiol becomes low. Understanding changes during this dynamic transition are important to prevent fragility fractures in midlife and older women. The exploration of long-lived 41Ca (T1/2 = 1.04 × 105 yrs) tracer measurements using accelerator mass spectrometry (AMS) leads to the possibility of monitoring bone remodeling balance. With this new technology, we explored a pilot long-term feasibility study of bone health by measuring the 41Ca trace element in urine for six years from premenopausal to later perimenopausal phases in one midlife woman. We measured bone mineral density in parallel.

  12. Preferential flow in heterogeneous forest-reclaimed lignitic mine soil I. Cell-lysimeter and multiple-tracer study

    NASA Astrophysics Data System (ADS)

    Hangen, E.; Gerke, H. H.; Schaaf, W.; Hüttl, R. F.

    2003-04-01

    Flow and transport processes in forest-reclaimed lignitic mine soils are required to quantify water and element budgets, which are important for long-term predictions of restored ecosystem stability and development of mining area water quality. Soil water pressure head and solute concentration measurements using tensiometers and suction cups showed strong spatial heterogeneity possibly indicating preferential flow effects. Properties and spatial structures of the mostly sandy mine soils and transport processes, however, have not sufficiently been known for detailed assessments. The objective of this study was to quantitatively analyse flow paths and measure amount and spatial distribtion of leaching. Water and element fluxes were studied at a reclaimed mine spoil site, which was afforested in 1982 with Pinus nigra. At a 3.3 m2 plot, the total percolating water was collected in 110 cm soil depth by 45 squared suction cells of 27 cm edge length each. A multi-tracer solution containing deuterium, bromide, and terbuthylazine was applied evenly at the plot surface and imposed to natural infiltration. Leaching was measured for a period of about 2 years. One third of the cells never delivered any drainage water while few cells had large drainage rates which in one case even exceeded local infiltration rates. About 71 % of the drainage was through 9 % of the area. The spatial distribution of the leached bromide tracer did not always correspond with that of drainage. Relative concentrations of bromide and deuterium were similar. Terbuthylazine was observed only sporadically during the first drainage period and at relatively small concentrations just above the analytical detection limit. Leaching patterns of the sorptive herbicide indicate only relatively small nonequilibrium-type preferential flow. Sediment structures, water repellent regions, and tree root distributions seem to be important for funneling and flow path formation.

  13. Investigation of Contaminant Transport and Dispersion in New York Harbor by a High Resolution SF6 Tracer Study

    NASA Astrophysics Data System (ADS)

    Caplow, T.; Schlosser, P.; Ho, D. T.

    2002-12-01

    . Most measurements were taken at a depth of 1 m, with deeper profiles at certain locations. Numerous CTD casts were made to examine the halocline and thermocline at different points. The study period coincided with relatively dry and calm conditions. The data suggest rapid initial dispersion, both laterally and vertically, driven by the tides. However, flushing of the area as a whole was slow during the study period. After two weeks, the tracer persisted throughout Newark Bay, the Kills, and the lower reaches of the rivers. Bulk seaward advection was weak, although a considerable quantity of tracer found its way out of the Kills due to tidal action, whereupon it was heavily diluted in Raritan Bay or Upper New York Bay. Overall, the study enables prediction of available response time for certain contamination events, while also providing critical validation data for computational fluid dynamics models of this area.

  14. Isotopic variability of cave bears (δ15N, δ13C) across Europe during MIS 3

    NASA Astrophysics Data System (ADS)

    Krajcarz, Magdalena; Pacher, Martina; Krajcarz, Maciej T.; Laughlan, Lana; Rabeder, Gernot; Sabol, Martin; Wojtal, Piotr; Bocherens, Hervé

    2016-01-01

    Collagen, the organic fraction of bone, records the isotopic parameters of consumed food for carbon (δ13C) and nitrogen (δ15N). This relationship of isotopic signature between diet and tissue is an important tool for the study of dietary preferences of modern and fossil animal species. Since the first information on the isotopic signature of cave bear was reported, numerous data from Europe have become available. The goal of this work is to track the geographical variation of cave bear collagen isotopic values in Europe during Marine Isotopic Stage 3 (about 60,000-25,000 yr BP). In this study the results of new δ13C and δ15N isotopic analyses of cave bear collagen from four Central-Eastern European sites are presented, as well as a review of all published isotopic data for cave bears of the same period. The main conclusion is a lack of geographical East-West pattern in the variations of δ13C and δ15N values of cave bear collagen. Moreover, no relationship was found between cave bear taxonomy and isotopic composition. The cave bears from Central-Eastern Europe exhibit δ13C and δ15N values near the average of the range of Central, Western and Southern European cave bears. Despite the fact that most cave bear sites follow an altitudinal gradient, separate groups of sites exhibit shift in absolute values of δ13C, what disturbs an altitude-related isotopic pattern. The most distinct groups are: high Alpine sites situated over 1500 m a.s.l. - in terms of δ13C; and two Romanian sites Peştera cu Oase and Urşilor - in case of δ15N. Although the cave bear isotopic signature is driven by altitude, the altitudinal adjustment of isotopic data is not enough to explain the isotopic dissimilarity of these cave bears. The unusually high δ15N signature of mentioned Romanian sites is an isolated case in Europe. Cave bears from relatively closely situated Central-Eastern European sites and other Romanian sites are more similar to Western European than to Romanian

  15. On the use of flow-storage repartitions derived from artificial tracer tests for geothermal reservoir characterization in the Malm-Molasse basin: a theoretical study

    NASA Astrophysics Data System (ADS)

    Dewi, Dina Silvia; Osaigbovo Enomayo, Augustine; Mohsin, Rizwan; Karmakar, Shyamal; Ghergut, Julia; Sauter, Martin

    2016-04-01

    needed to calculate FSR. Looking at the Sauerlach example, we find that premature interruption of tracer sampling systematically leads to overestimating the reservoir's storage capacity and underestimating its flow capacity, with misestimation generally increasing as the bedded/reef interfacial area per volume is increased. It is interesting to correlate these findings with the tracer-based approach to facies identification for the shallower Malm aquifers of the Southern Franconian Alb, proposed by Seiler et al. (1989, 1995) and with expectations from the direct (i. e., distributed-parameter) modeling of matrix-diffusive effects (Maloszewski and Zuber 1985) on measured tracer signals. References: Maloszewski P, Zuber A (1985) On the theory of tracer experiments in fissured rocks with a porous matrix, Journal of Hydrology, 79, 333-358 Seiler K-P, Behrens H, Wolf M (1995) Use of artificial and environmental tracers to study storage and drainage of groundwater in the Franconian Alb, Germany, and the consequences for groundwater protection, Proc Isotopes in Water Resources Management, 2, 135-146 (IAEA, Vienna) Seiler K-P, Maloszewski P, Behrens H (1989) Hydrodynamic dispersion in karstified limestones and dolomites in the Upper Jurassic of the Franconian Alb, FRG, Journal of Hydrology, 108, 235-247 Shook G M (2003) A Simple, Fast Method of Estimating Fractured Reservoir Geometry from Tracer Tests, Geothermal Resources Council Transactions, 27, 407-411 Financial support from the German Federal Ministry for Economic Affairs and Energy is gratefully acknowledged. - Gefördert durch BMWi aufgrund eines Beschlusses des Deutschen Bundestages (FKZ 0325515 "TRENDS").

  16. Characterization of Atmospheric Nitrate Dynamics in a Sub-Alpine Watershed Using Δ17O and δ15N

    NASA Astrophysics Data System (ADS)

    Bourgeois, I.; Savarino, J. P.; Clement, J. C.

    2015-12-01

    Remote subalpine ecosystems are usually characterized by nutrient-poor soils (Körner, 2004; Seastedt et al., 2004), making them particularly susceptible to undergo changes due to increased atmospheric N deposition (Vitousek et al., 1997; Preunkert et al., 2003). Using Δ17O, a conserved tracer of atmospheric nitrate (NO3 atm) (Michalski et al., 2004; Tsunogai et al., 2010), and δ15N, indicator of NO3 biological sources (Kendall, 1998; Casciotti et al., 2009), we measured the seasonal variations of NO3 atm stable isotopic composition and concentration in several streams and soils originating from two sub-alpine watersheds in the French Alps. Our objective was to investigate whether or not NO3 atm impacts the soil N biogeochemical cycle by increasing nutrients availability for plants and bacteria. We coupled streams and soils measurements with snow-pits sampling and aerosols collection at the Lautaret Pass, to better emphasize the correlation between atmospheric deposition, soil retention and watersheds effluents response. Our results reveal that different temporal dynamics govern our study site: stream measurements show that in spring, snowmelt results in a NO3 atm impulse, accounting for ca. 31 % of the total stream NO3 budget; on the opposite in autumn, NO3 atm accounts only for ca. 3 % of the total stream NO3 budget, highlighting the presence of a NO3 bacterial pool (nitrification). We also inferred from the observed Δ17O variations two distinct phenomena in the spring/summer season: a fast snow run-off and a slower snow-water percolation. The later is believed to affect most the soil N cycle as it directly increases available NO3. Measured soil leachates and extracts confirm this hypothesis and point out the potential importance of anthropogenic N deposition as on average 7 to 10 % of the soil solutions NO3 derives directly from the atmosphere.

  17. Analysis of tracer and thermal transients during reinjection

    SciTech Connect

    Kocabas, I.

    1989-10-01

    This work studied tracer and thermal transients during reinjection in geothermal reserviors and developed a new technique which combines the results from interwell tracer tests and thermal injection-backflow tests to estimate the thermal breakthrough times. Tracer tests are essential to determine the degree of connectivity between the injection wells and the producing wells. To analyze the tracer return profiles quantitatively, we employed three mathematical models namely, the convection-dispersion (CD) model, matrix diffusion (MD) model, and the Avodnin (AD) model, which were developed to study tracer and heat transport in a single vertical fracture. We considered three types of tracer tests namely, interwell tracer tests without recirculation, interwell tracer tests with recirculation, and injection-backflow tracer tests. To estimate the model parameters, we used a nonlinear regression program to match tracer return profiles to the solutions.

  18. Using delta15N values to characterise the nitrogen nutrient pathways from intensive animal units.

    PubMed

    Skinner, R A; Ineson, P; Jones, H; Sleep, D; Rank, R

    2006-01-01

    Previous studies on foliar delta15N values, in certain bryophytes, have indicated signature similarities to source pollutants. The object of this study was to investigate the effect further, by examining the mechanisms whereby isotopic fractionation occurs in systems such as atmospheric ammonia (NH3), throughfall, vegetation and soil. Measurements taken in and around point emission sources will then be used to characterise the various fractionation effects associated with these N transformations, as well as to demonstrate some of the issues associated with using delta15N values as pollution indicators. The atmospheric dispersion model UK-ADMS has also been used to model atmospheric delta15NH3 emissions, with signatures exhibiting marked negative shifts immediately downwind of an agricultural NH3 source. Similar dispersion patterns were mapped for NH3 concentration data illustrating the link between these two forms of measurement.

  19. Using dual-bacterial denitrification to improve δ15N determinations of nitrates containing mass-independent 17O

    USGS Publications Warehouse

    Coplen, T.B.; Böhlke, J.K.; Casciotti, K.L.

    2004-01-01

    The bacterial denitrification method for isotopic analysis of nitrate using N2O generated from Pseudomonas aureofaciens may overestimate ??15N values by as much as 1-2??? for samples containing atmospheric nitrate because of mass-independent 17O variations in such samples. By analyzing such samples for ??15N and ??18O using the denitrifier Pseudomonas chlororaphis, one obtains nearly correct ??15N values because oxygen in N 2O generated by P. chlororaphis is primarily derived from H 2O. The difference between the apparent ??15N value determined with P. aureofaciens and that determined with P. chlororaphis, assuming mass-dependent oxygen isotopic fractionation, reflects the amount of mass-independent 17O in a nitrate sample. By interspersing nitrate isotopic reference materials having substantially different ?? 18O values with samples, one can normalize oxygen isotope ratios and determine the fractions of oxygen in N2O derived from the nitrate and from water with each denitrifier. This information can be used to improve ??15N values of nitrates having excess 17O. The same analyses also yield estimates of the magnitude of 17O excess in the nitrate (expressed as ??17O) that may be useful in some environmental studies. The 1-?? uncertainties of ??15N, ??18O and ??17O measurements are ??0.2, ??0.3 and ??5???, respectively. Copyright ?? 2004 John Wiley & Sons, Ltd.

  20. A field tracer study of attenuation of atrazine, hexazinone and procymidone in a pumice sand aquifer.

    PubMed

    Pang, L; Close, M E

    2001-12-01

    A field tracer experiment, simulating point source contamination, was conducted to investigate attenuation and transport of atrazine, hexazinone and procymidone in a volcanic pumice sand aquifer. Preliminary laboratory incubation tests were also carried out to determine degradation rates. Field transport of the pesticides was observed to the significant under non-equilibrium conditions. Therefore, a two-region/two-site non-equilibrium transport model, N3DADE, was used for analysis of the field data. A lump reduction rate constant was used in this paper to encompass all the irreversible reduction processes (e.g. degradation, irreversible adsorption, complexation and filtration for the pesticides adsorbed into particles and colloids) which are assumed to follow a first-order rate law. Results from the field experiment suggest that (a) hexazinone was the most mobile (retardation factor R = 1.4) and underwent least mass reduction; (b) procymidone was the least mobile (R = 9.26) and underwent the greatest mass reduction; (c) the mobility of atrazine (R = 4.45) was similar to that of rhodamine WT (R = 4.10). Hence, rhodamine WT can be used to delimit the appearance of atrazine in pumice sand groundwater. Results from the incubation tests suggest that (a) hexazinone was degraded only in the mixture of groundwater and aquifer material (degradation rate constant = 4.36 x 10(-3) day-1); (b) procymidone was degraded not only in the mixture of groundwater and aquifer material (rate constant = 1.12 x 10(-2) day-1) but also in the groundwater alone (rate constant = 2.79 x 10(-2) and-1); (c) atrazine was not degraded over 57 days incubation in either the mixture of aquifer material and groundwater or the groundwater alone. Degradation rates measured in the batch tests were much lower than the total reduction rates. This suggests that not only degradation but also other irreversible processes are important in attenuating pesticides under field conditions. Hence, the use of

  1. Tracer tomography (in) rocks!

    NASA Astrophysics Data System (ADS)

    Somogyvári, Márk; Jalali, Mohammadreza; Jimenez Parras, Santos; Bayer, Peter

    2016-04-01

    Physical behavior of fractured aquifers is rigorously controlled by the presence of interconnected conductive fractures, as they represent the main pathways for flow and transport. Ideally, they are simulated as a discrete fracture network (DFN) in a model to capture the role of fracture system geometry, i.e. fracture length, height, and width (aperture/transmissivity). Such network may be constrained by prior geological information or direct data resources such as field mapping, borehole logging and geophysics. With the many geometric features, however, calibration of a DFN to measured data is challenging. This is especially the case when spatial properties of a fracture network need to be calibrated to flow and transport data. One way to increase the insight in a fractured rock is by combining the information from multiple field tests. In this study, a tomographic configuration that combines multiple tracer tests is suggested. These tests are conducted from a borehole with different injection levels that act as sources. In a downgradient borehole, the tracer is recorded at different levels or receivers, in order to maximize insight in the spatial heterogeneity of the rock. As tracer here we chose heat, and temperature breakthrough curves are recorded. The recorded tracer data is inverted using a novel stochastic trans-dimensional Markov Chain Monte Carlo procedure. An initial DFN solution is generated and sequentially modified given available geological information, such as expected fracture density, orientation, length distribution, spacing and persistency. During this sequential modification, the DFN evolves in a trans-dimensional inversion space through adding and/or deleting fracture segments. This stochastic inversion algorithm requires a large number of thousands of model runs to converge, and thus using a fast and robust forward model is essential to keep the calculation efficient. To reach this goal, an upwind coupled finite difference method is employed

  2. Kinetic measurements of bone mineral metabolism: The use of Na-22 as a tracer for long-term bone mineral turnover studies

    NASA Technical Reports Server (NTRS)

    Palmer, H. E.

    1978-01-01

    Sodium-22 was studied as a tracer for bone mineral metabolism in rats and dogs. When incorporated into bone during growth from birth to adulthood, the bone becomes uniformly tagged with (22)Na which is released through the metabolic turnover of the bone. The (22)Na which is not incorporated in the bone matrix is rapidly excreted within a few days when animals are fed high but nontoxic levels of NaCl. The (22)Na tracer can be used to measure bone mineral loss in animals during space flight and in research on bone disease.

  3. INL Tracer Interpretation

    2007-03-27

    This spreadsheet application is for tracer test analysis. The analyses are based on the first temporal moment of a tracer. The governing equations are briefly discussed, and the individual steps required of the user are outlined. A series of Excel macros written in Visual Basic calculate mean residence time, swept pore volume, and flow-storage geometry from a tracer history.

  4. Natural abundance 14N and 15N solid-state NMR of pharmaceuticals and their polymorphs

    DOE PAGES

    Veinberg, Stanislav L.; Johnston, Karen E.; Jaroszewicz, Michael J.; Kispal, Brianna M.; Mireault, Christopher R.; Kobayashi, Takeshi; Pruski, Marek; Schurko, Robert W.

    2016-06-08

    14N ultra-wideline (UW), 1H{15N} indirectly-detected HETCOR (idHETCOR) and 15N dynamic nuclear polarization (DNP) solid-state NMR (SSNMR) experiments, in combination with plane-wave density functional theory (DFT) calculations of 14N EFG tensors, were utilized to characterize a series of nitrogen-containing active pharmaceutical ingredients (APIs), including HCl salts of scopolamine, alprenolol, isoprenaline, acebutolol, dibucaine, nicardipine, and ranitidine. Here, a case study applying these methods for the differentiation of polymorphs of bupivacaine HCl is also presented. All experiments were conducted upon samples with naturally-abundant nitrogen isotopes. For most of the APIs, it was possible to acquire frequency-stepped UW 14N SSNMR spectra of stationarymore » samples, which display powder patterns corresponding to pseudo-tetrahedral (i.e., RR'R"NH+ and RR'NH2+) or other (i.e., RNH2 and RNO2) nitrogen environments.« less

  5. 1H, 13C and 15N NMR assignments of phenazopyridine derivatives.

    PubMed

    Burgueño-Tapia, Eleuterio; Mora-Pérez, Yolanda; Morales-Ríos, Martha S; Joseph-Nathan, Pedro

    2005-03-01

    Phenazopyridine hydrochloride (1), a drug in clinical use for many decades, and some derivatives were studied by one- and two-dimensional (1)H, (13)C and (15)N NMR methodology. The assignments, combined with DFT calculations, reveal that the preferred protonation site of the drug is the pyridine ring nitrogen atom. The chemoselective acetylation of phenazopyridine (2) and its influence on the polarization of the azo nitrogen atoms were evidenced by the (15)N NMR spectra. Molecular calculations of the phenazopyridines 2-4 show that the pyridine and phenyl groups are oriented in an antiperiplanar conformation with intramolecular hydrogen bonding between the N-b atom and the C-2 amino group preserving the E-azo stereochemistry.

  6. Effect of body size and body mass on δ 13 C and δ 15 N in coastal fishes and cephalopods

    NASA Astrophysics Data System (ADS)

    Vinagre, C.; Máguas, C.; Cabral, H. N.; Costa, M. J.

    2011-11-01

    Carbon and nitrogen isotopes have been widely used in the investigation of trophic relations, energy pathways, trophic levels and migrations, under the assumption that δ 13C is independent of body size and that variation in δ 15N occurs exclusively due to ontogenetic changes in diet and not body size increase per se. However, several studies have shown that these assumptions are uncertain. Data from food-webs containing an important number of species lack theoretical support on these assumptions because very few species have been tested for δ 13C and δ 15N variation in captivity. However, if sampling comprises a wide range of body sizes from various species, the variation of δ 13C and δ 15N with body size can be investigated. While correlation between body size and δ 13C and δ 15N can be due to ontogenetic diet shifts, stability in such values throughout the size spectrum can be considered an indication that δ 13C and δ 15N in muscle tissues of such species is independent of body size within that size range, and thus the basic assumptions can be applied in the interpretation of such food webs. The present study investigated the variation in muscle δ 13C and δ 15N with body size and body mass of coastal fishes and cephalopods. It was concluded that muscle δ 13C and δ 15N did not vary with body size or mass for all bony fishes with only one exception, the dragonet Callionymus lyra. Muscle δ 13C and δ 15N also did not vary with body size or mass in cartilaginous fishes and cephalopods, meaning that body size/mass per se have no effect on δ 13C or δ 15N, for most species analysed and within the size ranges sampled. The assumption that δ 13C is independent of body size and that variation in δ 15N is not affected by body size increase per se was upheld for most organisms and can be applied to the coastal food web studied taking into account that C. lyra is an exception.

  7. Food webs of two intermittently open estuaries receiving 15N-enriched sewage effluent

    NASA Astrophysics Data System (ADS)

    Hadwen, Wade L.; Arthington, Angela H.

    2007-01-01

    Carbon and nitrogen stable isotope signatures were used to assess the response of food webs to sewage effluent discharged into two small intermittently open estuaries in northern New South Wales, Australia. One of these systems, Tallows Creek, has a history of direct sewage inputs, whilst the other, Belongil Creek, receives wastewater via an extensive wetland treatment system. The food webs of both systems were driven by algal sources of carbon, reflecting high autotrophic productivity in response to the nutrients entering the system from sewage effluent. All aquatic biota collected from Tallows Creek had significantly enriched δ15N signatures relative to their conspecifics from Belongil Creek, indicating that sewage nitrogen had been assimilated and transferred throughout the Tallows Creek food web. These δ15N values were higher than those reported from studies in permanently open estuaries receiving sewage effluent. We suggest that these enriched signatures and the transfer of nitrogen throughout the entire food web reflect differences in hydrology and associated nitrogen cycling processes between permanently open and intermittently open estuaries. Although all organisms in Tallows Creek were generally 15N-enriched, isotopically light (less 15N-enriched) individuals of estuary perchlet ( Ambassis marianus) and sea mullet ( Mugil cephalus) were also collected. These individuals were most likely recent immigrants into Tallows Creek, as this system had only recently been opened to the ocean. This isotopic discrimination between resident (enriched) and immigrant (significantly less enriched) individuals can provide information on fish movement patterns and the role of heavily polluted intermittently open estuaries in supporting commercially and recreationally valuable estuarine species.

  8. Impact of seaweed beachings on dynamics of δ(15)N isotopic signatures in marine macroalgae.

    PubMed

    Lemesle, Stéphanie; Mussio, Isabelle; Rusig, Anne-Marie; Menet-Nédélec, Florence; Claquin, Pascal

    2015-08-15

    A fine-scale survey of δ(15)N, δ(13)C, tissue-N in seaweeds was conducted using samples from 17 sampling points at two sites (Grandcamp-Maisy (GM), Courseulles/Mer (COU)) along the French coast of the English Channel in 2012 and 2013. Partial triadic analysis was performed on the parameter data sets and revealed the functioning of three areas: one estuary (EstA) and two rocky areas (GM(∗), COU(∗)). In contrast to oceanic and anthropogenic reference points similar temporal dynamics characterized δ(15)N signatures and N contents at GM(∗) and COU(∗). Nutrient dynamics were similar: the N-concentrations in seawater originated from the River Seine and local coastal rivers while P-concentrations mainly from these local rivers. δ(15)N at GM(∗) were linked to turbidity suggesting inputs of autochthonous organic matter from large-scale summer seaweed beachings made up of a mixture of Rhodophyta, Phaeophyta and Chlorophyta species. This study highlights the coupling between seaweed beachings and nitrogen sources of intertidal macroalgae.

  9. Affordable uniform isotope labeling with (2)H, (13)C and (15)N in insect cells.

    PubMed

    Sitarska, Agnieszka; Skora, Lukasz; Klopp, Julia; Roest, Susan; Fernández, César; Shrestha, Binesh; Gossert, Alvar D

    2015-06-01

    For a wide range of proteins of high interest, the major obstacle for NMR studies is the lack of an affordable eukaryotic expression system for isotope labeling. Here, a simple and affordable protocol is presented to produce uniform labeled proteins in the most prevalent eukaryotic expression system for structural biology, namely Spodoptera frugiperda insect cells. Incorporation levels of 80% can be achieved for (15)N and (13)C with yields comparable to expression in full media. For (2)H,(15)N and (2)H,(13)C,(15)N labeling, incorporation is only slightly lower with 75 and 73%, respectively, and yields are typically twofold reduced. The media were optimized for isotope incorporation, reproducibility, simplicity and cost. High isotope incorporation levels for all labeling patterns are achieved by using labeled algal amino acid extracts and exploiting well-known biochemical pathways. The final formulation consists of just five commercially available components, at costs 12-fold lower than labeling media from vendors. The approach was applied to several cytosolic and secreted target proteins. PMID:25929326

  10. An analysis of whole body tracer kinetics in dynamic PET studies with application to image-based blood input function extraction.

    PubMed

    Huang, Jian; O'Sullivan, Finbarr

    2014-05-01

    In a positron emission tomography (PET) study, the local uptake of the tracer is dependent on vascular delivery and retention. For dynamic studies the measured uptake time-course information can be best interpreted when knowledge of the time-course of tracer in the blood is available. This is certainly true for the most established tracers such as 18F-Fluorodeoxyglucose (FDG) and 15O-Water (H2O). Since direct sampling of blood as part of PET studies is increasingly impractical, there is ongoing interest in image-extraction of blood time-course information. But analysis of PET-measured blood pool signals is complicated because they will typically involve a combination of arterial, venous and tissue information. Thus, a careful appreciation of these components is needed to interpret the available data. To facilitate this process, we propose a novel Markov chain model for representation of the circulation of a tracer atom in the body. The model represents both arterial and venous time-course patterns. Under reasonable conditions equilibration of tracer activity in arterial and venous blood is achieved by the end of the PET study-consistent with empirical measurement. Statistical inference for Markov model parameters is a challenge. A penalized nonlinear least squares process, incorporating a generalized cross-validation score, is proposed. Random effects analysis is used to adaptively specify the structure of the penalty function based on historical samples of directly measured blood data. A collection of arterially sampled data from PET studies with FDG and H2O is used to illustrate the methodology. These data analyses are highly supportive of the overall modeling approach. An adaptation of the model to the problem of extraction of arterial blood signals from imaging data is also developed and promising preliminary results for cerebral and thoracic imaging studies with FDG and H2O are obtained.

  11. An Analysis of Whole Body Tracer Kinetics in Dynamic PET Studies With Application to Image-Based Blood Input Function Extraction

    PubMed Central

    Huang, Jian; O’Sullivan, Finbarr

    2014-01-01

    In a positron emission tomography (PET) study, the local uptake of the tracer is dependent on vascular delivery and retention. For dynamic studies the measured uptake time-course information can be best interpreted when knowledge of the time-course of tracer in the blood is available. This is certainly true for the most established tracers such as 18F-Fluorodeoxyglucose (FDG) and 15O-Water (H2O). Since direct sampling of blood as part of PET studies is increasingly impractical, there is ongoing interest in image-extraction of blood time-course information. But analysis of PET-measured blood pool signals is complicated because they will typically involve a combination of arterial, venous and tissue information. Thus, a careful appreciation of these components is needed to interpret the available data. To facilitate this process, we propose a novel Markov chain model for representation of the circulation of a tracer atom in the body. The model represents both arterial and venous time-course patterns. Under reasonable conditions equilibration of tracer activity in arterial and venous blood is achieved by the end of the PET study—consistent with empirical measurement. Statistical inference for Markov model parameters is a challenge. A penalized nonlinear least squares process, incorporating a generalized cross-validation score, is proposed. Random effects analysis is used to adaptively specify the structure of the penalty function based on historical samples of directly measured blood data. A collection of arterially sampled data from PET studies with FDG and H2O is used to illustrate the methodology. These data analyses are highly supportive of the overall modeling approach. An adaptation of the model to the problem of extraction of arterial blood signals from imaging data is also developed and promising preliminary results for cerebral and thoracic imaging studies with FDG and H2O are obtained. PMID:24770914

  12. The effect of noncollinearity of 15N-1H dipolar and 15N CSA tensors and rotational anisotropy on 15N relaxation, CSA/dipolar cross correlation, and TROSY.

    PubMed

    Fushman, D; Cowburn, D

    1999-02-01

    Current approaches to 15N relaxation in proteins assume that the 15N-1H dipolar and 15N CSA tensors are collinear. We show theoretically that, when there is significant anisotropy of molecular rotation, different orientations of the two tensors, experimentally observed in proteins, nucleic acids, and small peptides, will result in differences in site-specific correlation functions and spectral densities. The standard treatments of the rates of longitudinal and transverse relaxation of amide 15N nuclei, of the 15N CSA/15N-1H dipolar cross correlation, and of the TROSY experiment are extended to account for the effect of noncollinearity of the 15N-1H dipolar and 15N CSA (chemical shift anisotropy) tensors. This effect, proportional to the degree of anisotropy of the overall motion, (D parallel/D perpendicular - 1), is sensitive to the relative orientation of the two tensors and to the orientation of the peptide plane with respect to the diffusion coordinate frame. The effect is negligible at small degrees of anisotropy, but is predicted to become significant for D parallel/D perpendicular > or = 1.5, and at high magnetic fields. The effect of noncollinearity of 15N CSA and 15N-1H dipolar interaction is sensitive to both gross (hydrodynamic) properties and atomic-level details of protein structure. Incorporation of this effect into relaxation data analysis is likely to improve both precision and accuracy of the derived characteristics of protein dynamics, especially at high magnetic fields and for molecules with a high degree of anisotropy of the overall motion. The effect will also make TROSY efficiency dependent on local orientation in moderately anisotropic systems.

  13. A novel method for trapping and analyzing 15N in NO for tracing NO sources

    NASA Astrophysics Data System (ADS)

    Kang, Ronghua; Mulder, Jan; Dörsch, Peter

    2016-04-01

    15N isotope tracing is an effective and direct approach to investigate the biological and chemical sources of nitric oxide (NO) in soil. However, NO is highly reactive and rapidly converted to nitrogen dioxide (NO2) in the presence of ozone. Various chemical conversions of NO to the more stable solutes nitrite (NO2-) and nitrate (NO3-) have been proposed, which allow analysing the 15N abundance without major fractionation. However, NO emissions from soils are usually small, posing major challenges to conversion efficiency and background contamination. Here we present a novel method in which NO is oxidized to NO2- by chromium trioxide (CrO3) prior to conversion to NO2- and NO3- in an alkaline hydrogen peroxide (H2O2) solution. Immediately following trapping, manganese dioxide (MnO2) and 5M HCl are added to remove excess H2O2, and to adjust the pH to around 6.0-7.0, respectively. The resulting solution can be stored until analysis and is none-toxic, allowing to use a modified denitrifier method (Zhu et al., submitted), where NO2- and NO3- are reduced quantitatively to nitrous oxide (N2O). Optimum NO conversion rates of > 90% even at extremely low initial NO concentration were obtained with 4% H2O2, 0.5 M NaOH, and 0.5 L min-1 gas flow rate. In a laboratory test, using NO gas with different 15N signals produced from unlabelled and labelled NO2-, we found an overall precision of 0.4‰ for unlabelled and 49.7‰ for NO enriched with 1.0 atom% 15N, respectively. This indicates that this method can be used for both natural abundance studies of NO, as well as in labelling studies tracing NO sources. Zhu J, Yu L, Bakken LR, Mørkved PT, Mulder J, Dörsch P. Controlled induction of denitrification in Pseudomonas aureofaciens: a modified denitrifier method for 15N and 18O analysis in NO3- from natural water samples by IRMS. Submitted.

  14. Paleoenvironmental implications of taxonomic variation among δ 15 N values of chloropigments

    NASA Astrophysics Data System (ADS)

    Higgins, Meytal B.; Wolfe-Simon, Felisa; Robinson, Rebecca S.; Qin, Yelun; Saito, Mak A.; Pearson, Ann

    2011-11-01

    Natural variations in the ratios of nitrogen isotopes in biomass reflect variations in nutrient sources utilized for growth. In order to use δ 15N values of chloropigments of photosynthetic organisms to determine the corresponding δ 15N values of biomass - and by extension, surface waters - the isotopic offset between chlorophyll and biomass must be constrained. Here we examine this offset in various geologically-relevant taxa, grown using nutrient sources that may approximate ocean conditions at different times in Earth's history. Phytoplankton in this study include cyanobacteria (diazotrophic and non-diazotrophic), eukaryotic algae (red and green), and anoxygenic photosynthetic bacteria (Proteobacteria), as well as environmental samples from sulfidic lake water. Cultures were grown using N 2, NO 3-, and NH 4+ as nitrogen sources, and were examined under different light regimes and growth conditions. We find surprisingly high variability in the isotopic difference (δ 15N biomass - δ 15N chloropigment) for prokaryotes, with average values for species ranging from -12.2‰ to +11.7‰. We define this difference as ɛpor, a term that encompasses diagenetic porphyrins and chlorins, as well as chlorophyll. Negative values of ɛpor reflect chloropigments that are 15N-enriched relative to biomass. Notably, this enrichment appears to occur only in cyanobacteria. The average value of ɛpor for freshwater cyanobacterial species is -9.8 ± 1.8‰, while for marine cyanobacteria it is -0.9 ± 1.3‰. These isotopic effects group environmentally but not phylogenetically, e.g., ɛpor values for freshwater Chroococcales resemble those of freshwater Nostocales but differ from those of marine Chroococcales. Our measured values of ɛpor for eukaryotic algae (range = 4.7-8.7‰) are similar to previous reports for pure cultures. For all taxa studied, values of ɛpor do not depend on the type of nitrogen substrate used for growth. The observed environmental control of

  15. Natural abundance (14)N and (15)N solid-state NMR of pharmaceuticals and their polymorphs.

    PubMed

    Veinberg, Stanislav L; Johnston, Karen E; Jaroszewicz, Michael J; Kispal, Brianna M; Mireault, Christopher R; Kobayashi, Takeshi; Pruski, Marek; Schurko, Robert W

    2016-06-29

    (14)N ultra-wideline (UW), (1)H{(15)N} indirectly-detected HETCOR (idHETCOR) and (15)N dynamic nuclear polarization (DNP) solid-state NMR (SSNMR) experiments, in combination with plane-wave density functional theory (DFT) calculations of (14)N EFG tensors, were utilized to characterize a series of nitrogen-containing active pharmaceutical ingredients (APIs), including HCl salts of scopolamine, alprenolol, isoprenaline, acebutolol, dibucaine, nicardipine, and ranitidine. A case study applying these methods for the differentiation of polymorphs of bupivacaine HCl is also presented. All experiments were conducted upon samples with naturally-abundant nitrogen isotopes. For most of the APIs, it was possible to acquire frequency-stepped UW (14)N SSNMR spectra of stationary samples, which display powder patterns corresponding to pseudo-tetrahedral (i.e., RR'R''NH(+) and RR'NH2(+)) or other (i.e., RNH2 and RNO2) nitrogen environments. Directly-excited (14)N NMR spectra were acquired using the WURST-CPMG pulse sequence, which incorporates WURST (wideband, uniform rate, and smooth truncation) pulses and a CPMG (Carr-Purcell Meiboom-Gill) refocusing protocol. In certain cases, spectra were acquired using (1)H → (14)N broadband cross-polarization, via the BRAIN-CP (broadband adiabatic inversion - cross polarization) pulse sequence. These spectra provide (14)N electric field gradient (EFG) tensor parameters and orientations that are particularly sensitive to variations in local structure and intermolecular hydrogen-bonding interactions. The (1)H{(15)N} idHETCOR spectra, acquired under conditions of fast magic-angle spinning (MAS), used CP transfers to provide (1)H-(15)N chemical shift correlations for all nitrogen environments, except for two sites in acebutolol and nicardipine. One of these two sites (RR'NH2(+) in acebutolol) was successfully detected using the DNP-enhanced (15)N{(1)H} CP/MAS measurement, and one (RNO2 in nicardipine) remained elusive due to the absence of

  16. Plant uptake of cations under nutrient limitation: An environmental tracer study using Ca/Sr and K/Rb ratios

    NASA Astrophysics Data System (ADS)

    Shi, Z.; Keller, C. K.; Stacks, D.; Grant, M.; Harsh, J. B.; Letourneau, M.; Gill, R. A.; Balogh-Brunstad, Z.; Thomashow, L.; Dohnalkova, A.

    2012-12-01

    Vascular plant growth builds soils and ecosystem nutrient capital by sequestering and partitioning atmospheric CO2 into organic matter and continental runoff and driving terrestrial water and energy balances. Plant root-system functions, e.g. nutrient mobilization and uptake, are altered by environmental stress. However, the stress-response relationships are poorly understood. Chemical tracers have potential for assessing contributions of nutrients from various nutrient pools. Our objective is to quantitatively study how varying degrees of nutrient limitation (and corresponding needs to extract base cations from mineral sources) influence Ca and K uptake functions in a plant-root-mineral system. We are studying plant-driven mineral weathering in column experiments with red pine (Pinus resinosa) seedlings. The columns contain quartz sand amended with anorthite and biotite that constitute the sole mineral sources of Ca and K. These minerals also contain known amounts of Sr and Rb, which exhibit chemical behavior similar to Ca and K, respectively. The solution source of Ca and K was varied by adding 0% (no dissolved Ca and K), 10%, 30%, or 100% of a full strength Ca and K nutrient solution through irrigation water in which both Sr and Rb concentrations were negligible. Selected columns were destructively sampled at 3, 6 and 9 months to harvest biomass and measure plant uptake of cations. We used Ca/Sr and K/Rb ratio results to estimate the contributions of Ca and K from mineral and solution sources. For the 0% nutrient treatment, the Ca/Sr and K/Rb ratios in total biomass at 3 months, compared with those in the mineral phases, suggested preferential uptake of Ca and K over Sr and Rb, respectively, and allowed us to determine uptake discrimination factors for both cations. The K/Rb ratios in total biomass increased with greater K availability in the solution source, as expected, but Ca/Sr ratios did not show any dependence on Ca availability in the solution source

  17. Exploring the nitrogen ingestion of aphids--a new method using electrical penetration graph and (15)N labelling.

    PubMed

    Kuhlmann, Franziska; Opitz, Sebastian E W; Inselsbacher, Erich; Ganeteg, Ulrika; Näsholm, Torgny; Ninkovic, Velemir

    2013-01-01

    Studying plant-aphid interactions is challenging as aphid feeding is a complex process hidden in the plant tissue. Here we propose a combination of two well established methods to study nutrient acquisition by aphids focusing on the uptake of isotopically labelled nitrogen ((15)N). We combined the Electrical Penetration Graph (EPG) technique that allows detailed recording of aphid feeding behaviour and stable isotope ratio mass spectrometry (IRMS) to precisely measure the uptake of nitrogen. Bird cherry-oat aphids Rhopalosiphum padi L. (Hemiptera, Aphididae) fed for 24 h on barley plants (Hordeum vulgare L., cultivar Lina, Poaceae) that were cultivated with a (15)N enriched nutrient solution. The time aphids fed in the phloem was strongly positive correlated with their (15)N uptake. All other single behavioural phases were not correlated with (15)N enrichment in the aphids, which corroborates their classification as non-feeding EPG phases. In addition, phloem-feeding and (15)N enrichment of aphids was divided into two groups. One group spent only short time in the phloem phase and was unsuccessful in nitrogen acquisition, while the other group displayed longer phloem-feeding phases and was successful in nitrogen acquisition. This suggests that several factors such as the right feeding site, time span of feeding and individual conditions play a role for the aphids to acquire nutrients successfully. The power of this combination of methods for studying plant-aphid interactions is discussed.

  18. Spatial Patterns of Plant δ13C and δ15N Along a Topoedaphic Gradient in a Subtropical Savanna Landscape

    NASA Astrophysics Data System (ADS)

    Bai, E.; Boutton, T. W.; Liu, F.; Wu, B.; Archer, S. R.

    2005-12-01

    δ13C and δ15N values of plants are powerful tools in physiological ecology, ecosystem science, and global biogeochemistry, yet we know relatively little about their variation and controls at the landscape scale. In this study, we investigated landscape-scale spatial variations in the foliar isotopic composition of 3 woody plant species across a 308 m topoedaphic gradient, along which soil texture and plant resources (water and nitrogen availability) varied from upland (86 m) to lowland (84 m) portions of the landscape. The study was conducted in a subtropical savanna at the La Copita Research Area, approximately 60 km west of Corpus Christi, TX. Foliar δ13C, δ15N, leaf nitrogen concentration ([N]), and specific leaf area (SLA) were measured on all individuals of Prosopis glandulosa, Condalia hookeri, and Zanthoxylum fagara present within a belt transect 308 m long x 12 m wide. Soil texture, available soil moisture, and total N were measured at 1 m intervals along the center-line of the belt transect. Clay content, available soil moisture, and soil total N were all negatively correlated with elevation along the transect. Leaf δ13C and δ15N values for all 3 species increased by 1-4 o/oo with decreasing elevation along the transect. Contrary to theory and previous studies, δ13C values were highest where soil water was most available, suggesting that some other variable could be overriding or interacting with water availability. Foliar [N] appeared to exert the strongest control over landscape-level variation, and was positively correlated with δ13C of all species (R 2 = 0.58, p<0.0001). Since leaf [N] is positively related to photosynthetic capacity, plants with high [N] are likely to have low Ci/Ca ratios and therefore higher δ13C values. δ15N values of Zanthoxylum and Condalia were positively correlated with leaf [N] and soil water availability; however, these relationships were absent for Prosopis, an N-fixing tree legume. We speculate that the

  19. Human ketone body production and utilization studied using tracer techniques: Regulation by free fatty acids, insulin, catecholamines, and thyroid hormones

    SciTech Connect

    Keller, U.; Lustenberger, M.; Mueller-Brand, J.G.; Gerber, P.P.; Stauffacher, W.

    1989-05-01

    Ketone body concentrations fluctuate markedly during physiological and pathological conditions. Tracer techniques have been developed in recent years to study production, utilization, and the metabolic clearance rate of ketone bodies. This review describes data on the roles of insulin, catecholamines, and thyroid hormones in the regulation of ketone body kinetics. The data indicate that insulin lowers ketone body concentrations by three independent mechanisms: first, it inhibits lipolysis, and thus lowers free fatty acid availability for ketogenesis; second, it restrains ketone body production within the liver; third, it enhances peripheral ketone body utilization. To assess these effects in humans in vivo, experimental models were developed to study insulin effects with controlled concentrations of free fatty acids, insulin, glucagon, and ketone bodies. Presently available data also support an important role of catecholamines in increasing ketone body concentrations. Evidence was presented that norepinephrine increases ketogenesis not only by stimulating lipolysis, and thus releasing free fatty acids, but also by increasing intrahepatic ketogenesis. Thyroid hormone availability was associated with lipolysis and ketogenesis. Ketone body concentrations after an overnight fast were only modestly elevated in hyperthyroidism resulting from increased peripheral ketone body clearance. There was a significant correlation between serum triiodothyronine levels and the ketone body metabolic clearance rate. Thus, ketone body homeostasis in human subjects resulted from the interaction of hormones such as insulin, catecholamines, and thyroid hormones regulating lipolysis, intrahepatic ketogenesis, and peripheral ketone body utilization. 58 references.

  20. Foliar and fungal 15N:14N ratios reflect development of mycorrhizae and nitrogen supply during primary succession: testing analytical models.

    PubMed

    Hobbie, Erik A; Jumpponen, Ari; Trappe, Jim

    2005-12-01

    per thousand. Plants, fungi and soil were at least 4 per thousand higher in delta15N from the mature site than in recently exposed sites. On both the forefront and the mature site, host-specific ectomycorrhizal fungi had higher delta15N values than ectomycorrhizal fungi with a broad host range. From these isotopic patterns, we conclude: (1) large enrichments in 15N of many ectomycorrhizal fungi relative to co-occurring ectomycorrhizal plants are best explained by treating the plant-fungal-soil system as a closed system with a discrimination against 15N of 8-10 per thousand during transfer from fungi to plants, (2) based on models of 15N mass balance, ericoid and ectomycorrhizal fungi retain up to two-thirds of the N in the plant-mycorrhizal system under the N-limited conditions at forefront sites, (3) sporocarps are probably enriched in 15N by an additional 3 per thousand relative to available nitrogen, and (4) host-specific ectomycorrhizal fungi may transfer more N to plant hosts than non-host-specific ectomycorrhizal fungi. Our study confirms that nitrogen isotopes are a powerful tool for probing nitrogen dynamics between mycorrhizal fungi and associated plants.

  1. Measurement of multiple psi torsion angles in uniformly 13C,15N-labeled alpha-spectrin SH3 domain using 3D 15N-13C-13C-15N MAS dipolar-chemical shift correlation spectroscopy.

    PubMed

    Ladizhansky, Vladimir; Jaroniec, Christopher P; Diehl, Annette; Oschkinat, Hartmut; Griffin, Robert G

    2003-06-01

    We demonstrate the simultaneous measurement of several backbone torsion angles psi in the uniformly (13)C,(15)N-labeled alpha-Spectrin SH3 domain using two different 3D 15N-13C-13C-15N dipolar-chemical shift magic-angle spinning (MAS) NMR experiments. The first NCCN experiment utilizes double quantum (DQ) spectroscopy combined with the INADEQUATE type 13C-13C chemical shift correlation. The decay of the DQ coherences formed between 13C'(i) and 13C(alphai) spin pairs is determined by the "correlated" dipolar field due to 15N(i)-13C(alphai) and 13C'(i)-15N(i+1) dipolar couplings and is particularly sensitive to variations of the torsion angle in the regime |psi| > 140 degrees. However, the ability of this experiment to constrain multiple psi-torsion angles is limited by the resolution of the 13C(alpha)-(13)CO correlation spectrum. This problem is partially addressed in the second approach described here, which is an NCOCA NCCN experiment. In this case the resolution is enhanced by the superior spectral dispersion of the 15N resonances present in the 15N(i+1)-13C(alphai) part of the NCOCA chemical shift correlation spectrum. For the case of the 62-residue alpha-spectrin SH3 domain, we determined 13 psi angle constraints with the INADEQUATE NCCN experiment and 22 psi constraints were measured in the NCOCA NCCN experiment.

  2. Effects of submesoscale turbulence on ocean tracers

    NASA Astrophysics Data System (ADS)

    Smith, Katherine M.; Hamlington, Peter E.; Fox-Kemper, Baylor

    2016-01-01

    Ocean tracers such as carbon dioxide, nutrients, plankton, and oil advect, diffuse, and react primarily in the oceanic mixed layer where air-sea gas exchange occurs and light is plentiful for photosynthesis. There can be substantial heterogeneity in the spatial distributions of these tracers due to turbulent stirring, particularly in the submesoscale range where partly geostrophic fronts and eddies and small-scale three-dimensional turbulence are simultaneously active. In this study, a large eddy simulation spanning horizontal scales from 20 km down to 5 m is used to examine the effects of multiscale turbulent mixing on nonreactive passive ocean tracers from interior and sea-surface sources. The simulation includes the effects of both wave-driven Langmuir turbulence and submesoscale eddies, and tracers with different initial and boundary conditions are examined in order to understand the respective impacts of small-scale and submesoscale motions on tracer transport. Tracer properties are characterized using spatial fields and statistics, multiscale fluxes, and spectra, and the results detail how tracer mixing depends on air-sea tracer flux rate, tracer release depth, and flow regime. Although vertical fluxes of buoyancy by submesoscale eddies compete with mixing by Langmuir turbulence, vertical fluxes of tracers are often dominated by Langmuir turbulence, particularly for tracers that are released near the mixed-layer base or that dissolve rapidly through the surface, even in regions with pronounced submesoscale activity. Early in the evolution of some tracers, negative eddy diffusivities occur co-located with regions of negative potential vorticity, suggesting that symmetric instabilities or other submesoscale phenomenon may act to oppose turbulent mixing.

  3. FUNCTIONAL OVERLAP OF ROOT SYSTEMS IN AN OLD-GROWTH FOREST INFERRED FROM TRACER 15N UPTAKE

    EPA Science Inventory

    Belowground competition for nutrients and water is considered a key factor affecting spatial organization and productivity of individual stems within forest stands, yet there are few data describing the lateral extent and overlap of competing root systems. We quantified the func...

  4. delta15N and delta13C diet-tissue discrimination factors for large sharks under semi-controlled conditions.

    PubMed

    Hussey, Nigel E; Brush, Jaclyn; McCarthy, Ian D; Fisk, Aaron T

    2010-04-01

    Stable isotopes (delta(15)N and delta(13)C) are being widely applied in ecological research but there has been a call for ecologists to determine species- and tissue-specific diet discrimination factors ((13)C and (15)N) for their study animals. For large sharks stable isotopes may provide an important tool to elucidate aspects of their ecological roles in marine systems, but laboratory based controlled feeding experiments are impractical. By utilizing commercial aquaria, we estimated (15)N and (13)C of muscle, liver, vertebral cartilage and a number of organs of three large sand tiger (Carcharias taurus) and one large lemon shark (Negaprion brevirostris) under a controlled feeding regime. For all sharks mean+/-SD for (15)N and (13)C in lipid extracted muscle using lipid extracted prey data were 2.29 per thousand+/-0.22 and 0.90 per thousand+/-0.33, respectively. The use of non-lipid extracted muscle and prey resulted in very similar (15)N and (13)C values but mixing of lipid and non-lipid extracted data produced variable estimates. Values of (15)N and (13)C in lipid extracted liver and prey were 1.50 per thousand+/-0.54 and 0.22 per thousand+/-1.18, respectively. Non-lipid extracted diet discrimination factors in liver were highly influenced by lipid content and studies that examine stable isotopes in shark liver, and likely any high lipid tissue, should strive to remove lipid effects through standardising C:N ratios, prior to isotope analysis. Mean vertebral cartilage (15)N and (13)C values were 1.45 per thousand+/-0.61 and 3.75 per thousand+/-0.44, respectively. Organ (15)N and (13)C values were more variable among individual sharks but heart tissue was consistently enriched by approximately 1-2.5 per thousand. Minimal variability in muscle and liver delta(15)N and delta(13)C sampled at different intervals along the length of individual sharks and between liver lobes suggests that stable isotope values are consistent within tissues of individual animals. To our

  5. Isotope tracer studies of diffusion in silicates and of geological transport processes using actinide elements

    SciTech Connect

    Wasserburg, G.J.

    1992-01-01

    The following are reported: high abundance sensitivity mass spectrometer for U-Th studies; [sup 238]U-[sup 230]Th disequilibrium in recent lavas from Iceland; water-rock interaction from U-Th studies; resonance ionization mass spectrometry of Os and Ti isotopes; and self-diffusion of Mg.

  6. Biological tracer method

    DOEpatents

    Strong-Gunderson, J.M.; Palumbo, A.V.

    1998-09-15

    The present invention is a biological tracer method for characterizing the movement of a material through a medium, comprising the steps of: introducing a biological tracer comprising a microorganism having ice nucleating activity into a medium; collecting at least one sample of the medium from a point removed from the introduction point; and analyzing the sample for the presence of the biological tracer. The present invention is also a method for using a biological tracer as a label for material identification by introducing a biological tracer having ice nucleating activity into a material, collecting a sample of a portion of the labelled material and analyzing the sample for the presence of the biological tracer. 2 figs.

  7. Biological tracer method

    DOEpatents

    Strong-Gunderson, Janet M.; Palumbo, Anthony V.

    1998-01-01

    The present invention is a biological tracer method for characterizing the movement of a material through a medium, comprising the steps of: introducing a biological tracer comprising a microorganism having ice nucleating activity into a medium; collecting at least one sample of the medium from a point removed from the introduction point; and analyzing the sample for the presence of the biological tracer. The present invention is also a method for using a biological tracer as a label for material identification by introducing a biological tracer having ice nucleating activity into a material, collecting a sample of a portion of the labelled material and analyzing the sample for the presence of the biological tracer.

  8. Quantification of (15)N-nitrate in urine with gas chromatography combustion isotope ratio mass spectrometry to estimate endogenous NO production.

    PubMed

    Houben, Els; Hamer, Henrike M; Luypaerts, Anja; De Preter, Vicky; Evenepoel, Pieter; Rutgeerts, Paul; Verbeke, Kristin

    2010-01-15

    The use of stable isotope labeled substrates and subsequent analysis of urinary nitrate, forms a noninvasive test for evaluation of the in vivo NO metabolism. The present paper describes a new method for simultaneous quantification of (15)N-nitrate and total nitrate with gas chromatography combustion isotope ratio mass spectrometry (GC-C-IRMS). Nitrate, isolated from urine with a nitrate selective resin, was reduced to nitrite using copperized cadmium. Subsequently, Sudan I was formed by diazotation. Sudan II was added as internal standard, and both molecules were analyzed with GC-C-IRMS as tert-butyldimethylsilyl derivatives. The accuracy was determined during a recovery study of two different known nitrate concentrations and two (15)N-enrichments. A recovery of 101.6% and 103.9% for total nitrate and 107.6% and 91.2% for (15)N-nitrate was obtained, respectively. The validated method was applied on complete 72 h urine collections after intravenous administration of (15)N-nitrate and (15)N-arginine in humans. On average, 51.8% (47.0-71.0%) of administered (15)N-nitrate was excreted, while 0.68% (0.44-1.17%) of (15)N-arginine was metabolized to nitrate. In conclusion, this method can be used for accurate simultaneous determination of (15)N-nitrate and total nitrate concentrations in urine and can be applied in clinical studies for noninvasive evaluation of NO metabolism in vivo.

  9. The fate of 15N-nitrate in mesocosms from five European peatlands differing in long-term nitrogen deposition rate

    NASA Astrophysics Data System (ADS)

    Zając, K.; Blodau, C.

    2016-02-01

    Elevated nitrogen (N) deposition changes the retention, transformation, and fluxes of N in ombrotrophic peatlands. To evaluate such effects we applied a 15N tracer (NH4 15NO3) at a rate of 2.3 g N m-2 yr-1 to mesocosms of five European peatlands with differing long-term N deposition rates for a period of 76 days of dry and 90 days of wet conditions. We determined background N content and moss length growth, and recovered the 15N tracer from the mosses, graminoids, shrubs, the peat, and dissolved N. Background N contents in Sphagnum mosses increased from 5.5 (Degerö Stormyr, deposition < 0.2 g N m-2 yr-1) up to 12.2 mg g-1 (Frölichshaier Sattelmoor, 4.7-6.0 g N m-2 yr-1). In peat from Degerö, nitrate and ammonium concentrations were below 3 mg L-1, whereas up to 30 (nitrate) and 11 mg L-1 (ammonium) was found in peat from Frölichshaier Sattelmoor. Sphagnum mosses (down to 5 cm below surface) generally intercepted large amounts of 15N (0.2-0.35 mg g-1) and retained the tracer most effectively relative to their biomass. Similar quantities of the 15N were recovered from the peat, followed by shrubs, graminoids, and the dissolved pool. At the most polluted sites we recovered more 15N from shrubs (up to 12.4 %) and from nitrate and ammonium (up to 0.7 %). However, no impact of N deposition on 15N retention by Sphagnum could be identified and their length growth was highest under high N background deposition. Our experiment suggests that the decline in N retention at levels above ca. 1.5 g m-2 yr-1, as expressed by elevated near-surface peat N content and increased dissolved N concentrations, is likely more modest than previously thought. This conclusion is related to the finding that Sphagnum species can apparently thrive at elevated long-term N deposition rates in European peatlands.

  10. Application of stable isotope tracers in the study of exercise metabolism in children: a primer.

    PubMed

    Mahon, Anthony D; Timmons, Brian W

    2014-02-01

    Exercise metabolism in children has traditionally been assessed using the respiratory exchange ratio (RER) to determine the contributions of fat and carbohydrate to the exercise energy demands. Although easily measured, RER measurements have limitations. Other methods to assess metabolism such as the obtainment of a muscle biopsy and the use of nuclear magnetic resonance spectroscopy carry ethical and feasibility concerns, respectively, which limit their use in studies involving children. Stable isotopes, used routinely in studies involving adults, can also be applied in studies involving children in an ethical and feasible manner. Two common stable isotopes used in metabolic studies involving children include carbon-13 (¹³C) and nitrogen-15 (¹⁵N). ¹³C-glucose can be used to study carbohydrate metabolism and ¹⁵N-glycine can be used to assess protein metabolism. This article reviews the use of ¹³C-glucose and ¹⁵N-glycine to study exercise metabolism in children, considers some of the associated ethical aspects, explains the general methodology involved in administering these isotopes and the resources required, and describes studies involving children utilizing these methods. Finally, suggestions for future research are provided to encourage further use of these techniques.

  11. Sources of nitrate in the Arno River waters: Constraints from d15N and d18O

    USGS Publications Warehouse

    Nisi, Barbara; Vaselli, Orlando; Buccianti, Antonella; Silva, Steven R.

    2005-01-01

    Running waters in anthropogenically affected areas are susceptible to nitrate contamination. Source identification is a fundamental step for the development of effective remediation. Previous studies pointed to pollution by nitrogen-bearing contaminants in the Arno Basin. In this paper, eleven surface water samples have been analysed for main and trace components and 15N/14N and 18O/16O ratios, with the aim of identifying for the first time the origin of nitrate in the Arno River Basin so that further investigations can appropriately be designed. d18O(NO3)and d15N(NO3) values have allowed to hypothesise the main sources of nitrate, as follows: i) mineralized fertilizer, ii) soil-organic nitrogen, iii) manure and septic waste. The anomalously high d15N and d18O values in the Chiana (d15N=24.9‰ and d18O=15.5‰) and Usciana tributaries (d15N=30.1‰ and d18O=7.2‰) show a low probability of belonging to the same population as that of the other samples and can be related to denitrification process of nitrate from animal waste/sewage and/or an industrial process (e.g. tanneries).

  12. Elucidating the trophodynamics of four coral reef fishes of the Solomon Islands using δ15N and δ13C

    NASA Astrophysics Data System (ADS)

    Greenwood, N. D. W.; Sweeting, C. J.; Polunin, N. V. C.

    2010-09-01

    Size-related diet shifts are important characteristics of fish trophodynamics. Here, body size-related changes in muscle δ15N and δ13C of four coral reef fishes, Acanthurus nigrofuscus (herbivore), Chaetodon lunulatus (corallivore) , Chromis xanthura (planktivore) and Plectropomus leopardus (piscivore) were investigated at two locations in the Solomon Islands. All four species occupied distinct isotopic niches and the concurrent δ13C' values of C. xanthura and P. leopardus suggested a common planktonic production source. Size-related shifts in δ15N, and thus trophic level, were observed in C. xanthura, C. lunulatus and P. leopardus, and these trends varied between location, indicating spatial differences in trophic ecology. A literature review of tropical fishes revealed that positive δ15N-size trends are common while negative δ15N-size trends are rare. Size-δ15N trends fall into approximately equal groups representing size-based feeding within a food chain, and that associated with a basal resource shift and occurs in conjunction with changes in production source, indicated by δ13C. The review also revealed large scale differences in isotope-size trends and this, combined with small scale location differences noted earlier, highlights a high degree of plasticity in the reef fishes studied. This suggests that trophic size analysis of reef fishes would provide a productive avenue to identify species potentially vulnerable to reef impacts as a result of constrained trophic behaviour.

  13. 15N2 formation and fast oxygen isotope exchange during pulsed 15N18O exposure of MnOx/CeO2

    SciTech Connect

    Kwak, Ja Hun; Szanyi, Janos

    2014-12-23

    Pulsing 15N18O onto an annealed 1% Mn16Ox/Ce16O2 catalyst resulted in very fast oxygen isotope exchange and 15N2 formation at 295 K. In the 1st 15N18O pulse, due to the presence of large number of surface oxygen defects, extensive 15N218O and 15N2 formations were observed. In subsequent pulses oxygen isotope exchange dominated as a result of highly labile oxygen in the oxide. We gratefully acknowledge the US Department of Energy (DOE), Office of Energy Efficiency and Renewable Energy/Vehicle Technologies Program for the support of this work. The research described in this paper was performed at the Environmental Molecular Sciences Laboratory (EMSL), a national scientific user facility sponsored by the DOE’s Office of Biological and Environmental Research and located at Pacific Northwest National Laboratory (PNNL). PNNL is operated for the US DOE by Battelle.

  14. Application of the tracer-aerosol gradient interpretive technique to sulfur attribution for the big bend regional aerosol and visibility observational study.

    PubMed

    Green, Mark; Kuhns, Hampden; Pitchford, Marc; Dietz, Russell; Ashbaugh, Lowell; Watson, Tom

    2003-05-01

    A simple data analysis method called the Tracer-Aerosol Gradient Interpretive Technique (TAGIT) is used to attribute particulate S and SO2 at Big Bend National Park in Texas and nearby areas to local and regional sources. Particulate S at Big Bend is of concern because of its effects on atmospheric visibility. The analysis used particulate S, SO2, and perfluorocarbon tracer data from six 6-hr sampling sites in and near Big Bend National Park. The data were collected in support of the Big Bend Regional Aerosol and Visibility Observational (BRAVO) Study; the field portion was conducted from July through October 1999. Perfluorocarbon tracer was released continuously from a tower at Eagle Pass, TX, approximately 25 km northeast of two large coal-fired power plants (Carbon I and II) in Coahuila, Mexico, and approximately 270 km east-southeast of Big Bend National Park. The perfluorocarbon tracer did not properly represent the location of the emissions from the Carbon power plants for individual 6-hr sampling periods and attributed only 3% of the particulate S and 27% of the SO2 at the 6-hr sites in and near Big Bend to sources represented by the tracer. An alternative approach using SO2 to tag "local" sources such as the Carbon plants attributed 10% of the particulate S and 75% of the SO2 at the 6-hr sites to local sources. Based on these two approaches, most of the regional (65-86%) and a small fraction (19-31%) of the local SO2 was converted to particulate S. The analysis implies that substantial reductions in particulate S at Big Bend National Park cannot be achieved by only reducing emissions from the Carbon power plants; reduction of emissions from many sources over a regional area would be necessary.

  15. Determination of traveltimes in the lower San Joaquin River basin, California, from dye-tracer studies during 1994-1995

    USGS Publications Warehouse

    Kratzer, Charles R.; Biagtan, Rhoda N.

    1997-01-01

    Dye-tracer studies were done in the lower San Joaquin River Basin in February 1994, June 1994, and February 1995. Dye releases were made in the Merced River (February 1994), Salt Slough (June 1994), Tuolumne River (February 1995), and Dry Creek (February 1995). The traveltimes determined in the studies aided the interpretation of pesticide data collected during storm sampling and guided sample collection during a Lagrangian pesticide study. All three studies used rhodamine WT 20-percent dye solution, which was released as a slug in midstream. The mean traveltime determined in the dye studies were compared to estimates based on regression equations of mean stream velocity as a function of streamflow. Dye recovery, the ratio of the calculated dye load at downstream sites to the initial amount of dye released, was determined for the 1994 studies and a dye-dosage formula was evaluated for all studies. In the February 1994 study, mean traveltime from the Merced River at River Road to the San Joaquin River near Vernalis (46.8 river miles) was 38.5 hours, and to the Delta-Mendota Canal at Tracy pumps (84.3 river miles) was 90.4 hours. In the June 1994 study, mean traveltime from Salt Slough at Highway 165 to Vernalis (64.0 river miles) was 80.1 hours. In the February 1995 study, the mean traveltime from the Tuolumne River at Roberts Ferry to Vernalis (51.5 river miles) was 35.8 hours. For the 1994 studies, the regression equations provided suitable estimates of travel-time, with ratios of estimated traveltime to mean dye traveltime of 0.94 to 1.08. However, for the 1995 dye studies, the equations considerably underestimated traveltime, with ratios of 0.49 to 0.73.In the February 1994 study, 70 percent of the dye released was recovered at Vernalis and 35percent was recovered at the Delta-Mendota Canal at Tracy pumps. In the June 1994 study, recovery was 61 percent at Patterson, 43 percent just upstream of the Tuolumne River confluence, and 37 percent at Vernalis. The dye

  16. Nitrogen mineralization from selected /sup 15/N-labelled crop residues and humus as affected by inorganic nitrogen

    SciTech Connect

    Santos, J.A.

    1987-01-01

    The use of cover crops or crop residues as a source of N to succeeding crops has become a matter of increasing importance for economic and environmental reason. Greenhouse and field studies were conducted to determine the N contribution of four /sup 15/N labelled crop residues, rye (Secale cereale L.), wheat (Triticum aestivum L.), crimson clover (Trifolium encarnatum L.), and hairy vetch (Vicia sativa L.), to successive crops and to evaluate the effect of different organic (ON) and inorganic N (IN) combinations on mineralization of the above residues. Total /sup 15/N recovery from the residues ranged from 51% to 85% and 4% to 74% for the greenhouse and field studies, respectively.

  17. Study of large eddy simulation of the effects of boundary layer convection on tracer uplift and transport

    NASA Astrophysics Data System (ADS)

    Huang, Qian; Wang, Rong

    2016-04-01

    Using large eddy model (LEM) and observed data from Dunhuang meteorological station during the intensive period of land-atmosphere interaction field experiment over arid region of North-west China, a series of sensitivity experiments have been performed to investigate the effects of the surface heat flux and wind shear on the strength and the organization of boundary layer convection as well as the growth of the convective boundary layer (CBL). The results show that surface heat flux increases with constant wind shear will give rise to a thicker and warmer CBL, stronger convections and larger thermal eddies due to intense surface turbulence transporting more energy to the upper layer. On the other hand wind shear increases with constant surface heat flux lead to a thicker and warmer CBL because of the entrainment of warm air from the inversion layer to the mixed layer, while the boundary layer convection became weaker with broken thermal eddies. To investigate the quantitative linkage of surface heat flux, wind shear with the tracer uplift rate and transport height, a passive tracer with a constant value of 100 was added at all model levels below the 100 m in all simulations. The least square analysis reveals that the tracer uplift rate increases linearly with the surface heat flux when wind shear is less than 10.5×10-3 s-1 owing to the enhancement of the downward transport of higher momentum. However, the tracer uplift rate decreases with increasing wind shear when the surface heat flux is less than 462.5 W/m2 because of the weakened convection. The passive tracer in the model is also shown to be transported to the higher altitude with increasing surface heat flux and under constant wind shear. However, under a constant surface heat flux, the tracer transport height increases with increasing wind shear only when the shear is above a certain threshold and this threshold depend on the magnitude of surface heat fluxes.

  18. Study of the effects of the chaser in push-pull tracer tests by using temporal moment analysis

    NASA Astrophysics Data System (ADS)

    Hebig, Klaus; Zeilfelder, Sarah; Ito, Narimitsu; Machida, Isao; Marui, Atsunao; Scheytt, Traugott

    2015-04-01

    "Push-pull" tracer tests are a suitable tracer test method for hydrochemical charac-terization of an aquifer in a single-well setting (e.g. in deep geothermal systems). A known amount of selected solutes as conservative and reactive tracers is injected into the aquifer ("push") and afterwards extracted ("pull"). In many cases, a so-called "chaser", which is just original groundwater without any added solutes, is injected directly after the injection of the test solution. Its objective is to push the test solution out of the bore-hole into the aquifer and therefore to mini-mize the influence of the gravel pack on the shape of the breakthrough curve. The influence of the chaser on the tracer breakthrough curve is unknown so far. Also, the determination of the appropriate volume for the chaser is a difficult task if at all applied. A first experiment was conducted with the objective to compare three push-pull tests with similar injection volumes, two tests with and one without a chaser. Results show that the application of a chaser lowers the main peak concentration. However, it does not alter the tailing of the breakthrough curve nor does it have a negative in-fluence on tracer mass recovery. In a second experiment, a new method was developed to determine the optimal chaser volume by testing seven different chaser injection volumes combined with temporal moment analysis and comparison of the mean residence times of the in-jected tracer fluid. As a result, the application of a chaser is recommended, when reactions of injected solutes within the open well or the gravel pack should be avoided. If a chaser is used, the new method mentioned above can easily be used to determine the required chaser injection volume. The experiments were conducted at the Hamasato test site in Horonobe (Hokkaido, Japan).

  19. NOAA EPA Near-Roadway Sound Barrier Atmospheric Tracer Study 2008

    EPA Science Inventory

    A roadway toxics dispersion study was conducted at the Idaho National Laboratory to document the effects on concentrations of roadway emissions behind a roadside sound barrier in various conditions of atmospheric stability. The key finding was that reduced concentrations were me...

  20. Experimental evidence for diel δ15N-patterns in different tissues, xylem and phloem saps of castor bean (Ricinus communis L.).

    PubMed

    Peuke, A D; Gessler, A; Tcherkez, G

    2013-12-01

    Nitrogen isotope signatures in plants might give insights in the metabolism and allocation of nitrogen. To obtain a deeper understanding of the modifications of the nitrogen isotope signatures, we determined δ(15)N in transport saps and in different fractions of leaves, axes and roots during a diel course along the plant axis. The most significant diel variations were observed in xylem and phloem saps where δ(15)N was significantly higher during the day compared with during the night. However in xylem saps, this was observed only in the canopy, but not at the hypocotyl positions. In the canopy, δ(15)N was correlated fairly well between phloem and xylem saps. These variations in δ(15)N in transport saps can be attributed to nitrate reduction in leaves during the photoperiod as well as to (15)N-enriched glutamine acting as transport form of N. δ(15)N of the water soluble fraction of roots and leaves partially affected δ(15)N of phloem and xylems saps. δ(15)N patterns are likely the result of a complex set of interactions and N-fluxes between plant organs. Furthermore, the natural nitrogen isotope abundance in plant tissue is not constant during the diel course - a fact that needs to be taken into account when sampling for isotopic studies.

  1. Isotope Tracers as Tools for Identifying Water Sources in Developing Regions: Case of Study in Southern Ecuador

    NASA Astrophysics Data System (ADS)

    Mosquera, G.; Lazo, P.; Crespo, P.; Célleri, R.

    2014-12-01

    Páramo ecosystems are widely recognized for their high water regulation capacity and as the main source of runoff generation in the Andean region. Understanding the hydrological functioning of the fragile wet Andean páramo ecosystems is critical in the mountainous regions of South America given their high susceptibility to global and local stressors such as land use change and climate change and variability . Despite this, most of the basins in the Andean mountain range are still ungauged, resulting in a currently hindered hydrologic analysis of the water sources contributing to runoff generation in the high-elevation páramo ecosystems. To improve this situation and provide a baseline for future tracer-based hydrologic studies, the isotopic signature of water samples collected within the Zhurucay River experimental basin (7.53 km2) was analyzed. The study area is located in the southern Ecuador and stretches over an altitudinal range of 3200 and 3900 m a.s.l. Water samples in rainfall, streamflow, and soils were collected between May 2011 and May 2013. Streamflow hydrometric and isotopic information within the study site was collected using a nested monitoring system. The main soils in the study site are the Andosols mainly located in the steep slopes, and the Histosols (Andean páramo wetlands) predominantly located at the bottom of the valley. Results reveal that the Andosols drain the infiltrated rainfall water to the Histosols. The Histosols on their turn feed creeks and small rivers. Pre-event water stored in the Histosols is the primary source of runoff generation throughout the year. Defining the water sources contributing to runoff generation is the first step towards the establishment of scientifically-based programs of management and conservation of water resources in the Andean region; and the monitoring of isotopic information has proven useful to improve the understanding of the ecosystem's hydrologic behavior.

  2. Dynamics of δ(15)N isotopic signatures of different intertidal macroalgal species: Assessment of bioindicators of N sources in coastal areas.

    PubMed

    Lemesle, Stéphanie; Erraud, Alexandre; Mussio, Isabelle; Rusig, Anne-Marie; Claquin, Pascal

    2016-09-15

    δ(15)N of annual (Ulva sp., Porphyra sp.) and perennial intertidal seaweed species (Chondrus crispus, Fucus sp.) collected on 17 sampling points along the French coast of the English Channel in 2012 and 2013 were assessed on their suitability as bioindicators of N pollution in coastal areas. A sine function applied for δ(15)N time series data showed for all the species the same seasonal trend with lowest δ(15)N values in April and highest in summer but with no significant interspecific differences of amplitude (α) and phase angle (ϕ). This model provides a useful tool for monitoring the inter-annual changes of N pollution. An interspecific variability of δ(15)N values was observed, probably due to their tolerance to emersion. An in vitro study for comparing the kinetic acquisition of the isotopic signal and N uptake mechanisms of each species underlined the influence of algal physiology on the δ(15)N interspecific variability. PMID:27349382

  3. Dynamics of δ(15)N isotopic signatures of different intertidal macroalgal species: Assessment of bioindicators of N sources in coastal areas.

    PubMed

    Lemesle, Stéphanie; Erraud, Alexandre; Mussio, Isabelle; Rusig, Anne-Marie; Claquin, Pascal

    2016-09-15

    δ(15)N of annual (Ulva sp., Porphyra sp.) and perennial intertidal seaweed species (Chondrus crispus, Fucus sp.) collected on 17 sampling points along the French coast of the English Channel in 2012 and 2013 were assessed on their suitability as bioindicators of N pollution in coastal areas. A sine function applied for δ(15)N time series data showed for all the species the same seasonal trend with lowest δ(15)N values in April and highest in summer but with no significant interspecific differences of amplitude (α) and phase angle (ϕ). This model provides a useful tool for monitoring the inter-annual changes of N pollution. An interspecific variability of δ(15)N values was observed, probably due to their tolerance to emersion. An in vitro study for comparing the kinetic acquisition of the isotopic signal and N uptake mechanisms of each species underlined the influence of algal physiology on the δ(15)N interspecific variability.

  4. An sup 15 N NMR method for the characterization of organic sulfur in coal and coal products via iminosulfurane formation

    SciTech Connect

    Franz, J.A.; Lamb, C.N.; Linehan, J.C.

    1991-09-01

    The indirect of organic sulfur by {sup 15}N NMR spectroscopy in the solid state is feasible by facile reactions providing the iminosulfurane structures. Unfortunately, nitrogen chemical shifts appear to be insufficiently sensitive to the nature of the sulfur substituent to be useful for structural studies. Further work is underway to determine the {sup 15}N chemical shifts of iminosulfuranes formed from dibenzothiophene, 4-4{prime}-dimethoxydiphenyl sulfide, and a sulfur-containing, methylated asphaltene to determine the sensitivity of {sup 15}N shifts to a broader variation of aromatic structure. Although double cross-polarization experiments or rotational echo experiments could make use of iminosulfurane formation for detection of carbon in proximity to sulfur, the difficulties in quantitation using these methods are not encouraging for coal product mixtures. 6 refs., 1 fig., 1 tab.

  5. Synthesis of 13C and 15N labeled 2,4-dinitroanisole.

    PubMed

    Jagadish, Bhumasamudram; Field, Jim A; Chorover, Jon; Sierra-Alvarez, Reyes; Abrell, Leif; Mash, Eugene A

    2014-05-30

    Syntheses of [(13)C6]-2,4-dinitroanisole (ring-(13)C6) from [(13)C6]-anisole (ring-(13)C6) and [(15)N2]-2,4-dinitroanisole from anisole using in situ generated acetyl nitrate and [(15)N]-acetyl nitrate, respectively, are described. Treatment of [(13)C6]-anisole (ring-(13)C6) with acetyl nitrate generated in 100% HNO3 gave [(13)C6]-2,4-dinitroanisole (ring-(13)C6) in 83% yield. Treatment of anisole with [(15)N]-acetyl nitrate generated in 10 N [(15)N]-HNO3 gave [(15)N2 ]-2,4-dinitroanisole in 44% yield after two cycles of nitration. Byproducts in the latter reaction included [(15)N]-2-nitroanisole and [(15)N]-4-nitroanisole.

  6. The “Speedy” Synthesis of Atom-Specific 15N Imino/Amido-Labeled RNA

    PubMed Central

    Kreutz, Christoph; Micura, Ronald

    2016-01-01

    Although numerous reports on the synthesis of atom-specific 15N-labeled nucleosides exist, fast and facile access to the corresponding phosphoramidites for RNA solid-phase synthesis is still lacking. This situation represents a severe bottleneck for NMR spectroscopic investigations on functional RNAs. Here, we present optimized procedures to speed up the synthesis of 15N(1) adenosine and 15N(1) guanosine amidites, which are the much needed counterparts of the more straightforward-to-achieve 15N(3) uridine and 15N(3) cytidine amidites in order to tap full potential of 1H/15N/15N-COSY experiments for directly monitoring individual Watson–Crick base pairs in RNA. Demonstrated for two preQ1 riboswitch systems, we exemplify a versatile concept for individual base-pair labeling in the analysis of conformationally flexible RNAs when competing structures and conformational dynamics are encountered. PMID:26237536

  7. Utilizing the charge field effect on amide (15)N chemical shifts for protein structure validation.

    PubMed

    Bader, Reto

    2009-01-01

    Of all the nuclei in proteins, the nuclear magnetic resonance (NMR) chemical shifts of nitrogen are the theoretically least well understood. In this study, quantum chemical methods are used in combination with polarizable-continuum models in order to show that consideration of the effective electric field, including charge screening due to solvation, improves considerably the consistencies of statistical relationships between experimental and computed amide (15)N shifts between various sets of charged and uncharged oligopeptides and small organic molecules. A single conversion scheme between shielding parameters from first principles using density functional theory (DFT) and experimental shifts is derived that holds for all classes of compounds examined here. This relationship is then used to test the accuracy of such (15)N chemical shift predictions in the cyclic decapeptide antibiotic gramicidin S (GS). GS has previously been studied in great detail, both by NMR and X-ray crystallography. It adopts a well-defined backbone conformation, and hence, only a few discrete side chain conformational states need to be considered. Moreover, a charge-relay effect of the two cationic ornithine side chains to the protein backbone has been described earlier by NMR spectroscopy. Here, DFT-derived backbone amide nitrogen chemical shifts were calculated for multiple conformations of GS. Overall, the structural dynamics of GS is revisited in view of chemical shift behavior along with energetic considerations. Together, the study demonstrates proof of concept that (15)N chemical shift information is particularly useful in the analysis and validation of protein conformational states in a charged environment.

  8. Human baby hair amino acid natural abundance 15N-isotope values are not related to the 15N-isotope values of amino acids in mother's breast milk protein.

    PubMed

    Romek, Katarzyna M; Julien, Maxime; Frasquet-Darrieux, Marine; Tea, Illa; Antheaume, Ingrid; Hankard, Régis; Robins, Richard J

    2013-12-01

    Since exclusively breast-suckled infants obtain their nutrient only from their mother's milk, it might be anticipated that a correlation will exist between the (15)N/(14)N isotope ratios of amino acids of protein of young infants and those supplied by their mother. The work presented here aimed to determine whether amino nitrogen transfer from human milk to infant hair protein synthesized within the first month of life conserves the maternal isotopic signature or whether post-ingestion fractionation dominates the nitrogen isotope spectrum. The study was conducted at 1 month post-birth on 100 mother-infant pairs. Isotope ratios (15)N/(14)N and (13)C/(12)C were measured using isotope ratio measurement by Mass Spectrometry (irm-MS) for whole maternal milk, and infant hair and (15)N/(14)N ratios were also measured by GC-irm-MS for the N-pivaloyl-O-isopropyl esters of amino acids obtained from the hydrolysis of milk and hair proteins. The δ(15)N and δ(13)C (‰) were found to be significantly higher in infant hair than in breast milk (δ(15)N, P < 0.001; δ(13)C, P < 0.001). Furthermore, the δ(15)N (‰) of individual amino acids in infant hair was also significantly higher than that in maternal milk (P < 0.001). By calculation, the observed shift in isotope ratio was shown not to be accounted for by the amino acid composition of hair and milk proteins, indicating that it is not simply due to differences in the composition in the proteins present. Rather, it would appear that each pool-mother and infant-turns over independently, and that fractionation in infant N-metabolism even in the first month of life dominates over the nutrient N-content.

  9. Field study of time-dependent selenium partitioning in soils using isotopically enriched stable selenite tracer.

    PubMed

    Di Tullo, Pamela; Pannier, Florence; Thiry, Yves; Le Hécho, Isabelle; Bueno, Maïté

    2016-08-15

    A better understanding of selenium fate in soils at both short and long time scales is mandatory to consolidate risk assessment models relevant for managing both contamination and soil fertilization issues. The purpose of this study was thus to investigate Se retention processes and their kinetics by monitoring time-dependent distribution/speciation changes of both ambient and freshly added Se, in the form of stable enriched selenite-77, over a 2-years field experiment. This study clearly illustrates the complex reactivity of selenium in soil considering three methodologically defined fractions (i.e. soluble, exchangeable, organic). Time-dependent redistribution of Se-77 within solid-phases having different reactivity could be described as a combination of chemical and diffusion controlled processes leading to its stronger retention. Experimental data and their kinetic modeling evidenced that transfer towards less labile bearing phases are controlled by slow processes limiting the overall sorption of Se in soils. These results were used to estimate time needed for (77)Se to reach the distribution of naturally present selenium which may extend up to several decades. Ambient Se speciation accounted for 60% to 100% of unidentified species as function of soil type whereas (77)Se(IV) remained the more abundant species after 2-years field experiment. Modeling Se in the long-term without taking account these slow sorption kinetics would thus result in underestimation of Se retention. When using models based on Kd distribution coefficient, they should be at least reliant on ambient Se which is supposed to be at equilibrium. PMID:27100008

  10. Isotope Tracer Studies of Diffusion in Sillicates and of Geological Transport Processes Using Actinide Elements

    SciTech Connect

    Wasserburg, Gerald J

    2008-07-31

    The objectives were directed toward understanding the transport of chemical species in nature, with particular emphasis on aqueous transport in solution, in colloids, and on particles. Major improvements in measuring ultra-low concentrations of rare elements were achieved. We focused on two areas of studies: (1) Field, laboratory, and theoretical studies of the transport and deposition of U, Th isotopes and their daughter products in natural systems; and (2) Study of calcium isotope fractionation effects in marine carbonates and in carbonates precipitated in the laboratory, under controlled temperature, pH, and rates of precipitation. A major study of isotopic fractionation of Ca during calcite growth from solution has been completed and published. It was found that the isotopic shifts widely reported in the literature and attributed to biological processes are in fact due to a small equilibrium fractionation factor that is suppressed by supersaturation of the solution. These effects were demonstrated in the laboratory and with consideration of the solution conditions in natural systems, where [Ca{sup 2+}] >> [CO{sub 3}{sup 2-}] + [HCO{sub 3}{sup -}]. The controlling rate is not the diffusion of Ca, as was earlier proposed, but rather the rate of supply of [CO{sub 3}{sup 2-}] ions to the interface. This now opens the issues of isotopic fractionation of many elements to a more physical-chemical approach. The isotopic composition of Ca {Delta}({sup 44}Ca/{sup 40}Ca) in calcite crystals has been determined relative to that in the parent solutions by TIMS using a double spike. Solutions were exposed to an atmosphere of NH{sub 3} and CO{sub 2}, provided by the decomposition of (NH4)2CO3. Alkalinity, pH, and concentrations of CO{sub 3}{sup 2-}, HCO{sub 3}{sup -}, and CO{sub 2} in solution were determined. The procedures permitted us to determine {Delta}({sup 44}Ca/{sup 40}Ca) over a range of pH conditions, with the associated ranges of alkalinity. Two solutions with

  11. Magnetofossils as tracers of oxygenation change: a case study from the stratified Pettaquamscutt River Estuary

    NASA Astrophysics Data System (ADS)

    Chen, A. P.; Berounsky, V. M.; Chan, M. K.; Moskowitz, B. M.; Andrade Lima, E.; Kopp, R. E.; Cady, C.; Weiss, B. P.; Hesse, P. P.

    2013-12-01

    Magnetotactic bacteria (MB) are motile organisms commonly found around the oxic-anoxic-interface (OAI) in sediments and stratified water columns. Magnetite and greigite crystals synthesized by MB intracellularly, termed magnetosomes, can be preserved in sediments as magnetofossils. Changes in OAI thickness (due to changes in temperature, clathrate dissociation & methane oxidation, organic carbon supply/oxidation, or sedimentation rate) would produce proportional changes in MB population and sedimentary magnetofossil concentration. While potentially useful as an oxygenation proxy, magnetofossil quantification techniques and variables controlling their preservation in sediments need to be better understood. Most prior work focused on cultured magnetite-MB and sediment mixtures while studies of greigite-MB (found just below the OAI in the sulfidic hypolimnion) is lacking because axenic cultures do not exist. To address these issues, we study wild magnetite- and greigite-MB from the seasonally stratified Pettaquamscutt River Estuary Upper Basin (RI, USA) as a function of water depth, d. Transmission electron microscope imaging of 21 MB (377 magnetosomes) revealed a complexity in wild MB not found in cultures. From d=3.9 m-7.0 m, live-cell assays confirmed the presence of multiple MB morphotypes, both north- (majority) and south-seeking (minority), and a few magnetic protists. Based on a previous microscopy study just 1.4 km south of Upper Basin (Bazylinski et al., 1995), magnetite-MB are expected for d<5.0 m, mix magnetite- and greigite-MB for 5.0 m6.0 m. Coercivity distributions for all depths are characterized by a small variance, reflecting uniformity in magnetosome size. Interestingly, despite changing from dominant magnetite to greigite-MB with increasing depth, the median coercivity remained largely unchanged. Median coercivity is therefore not diagnostic of magnetosome mineralogy. We also report ferromagnetic resonance

  12. Organic vs. Conventional Grassland Management: Do 15N and 13C Isotopic Signatures of Hay and Soil Samples Differ?

    PubMed Central

    Klaus, Valentin H.; Hölzel, Norbert; Prati, Daniel; Schmitt, Barbara; Schöning, Ingo; Schrumpf, Marion; Fischer, Markus; Kleinebecker, Till

    2013-01-01

    Distinguishing organic and conventional products is a major issue of food security and authenticity. Previous studies successfully used stable isotopes to separate organic and conventional products, but up to now, this approach was not tested for organic grassland hay and soil. Moreover, isotopic abundances could be a powerful tool to elucidate differences in ecosystem functioning and driving mechanisms of element cycling in organic and conventional management systems. Here, we studied the δ15N and δ13C isotopic composition of soil and hay samples of 21 organic and 34 conventional grasslands in two German regions. We also used Δδ15N15N plant - δ15N soil) to characterize nitrogen dynamics. In order to detect temporal trends, isotopic abundances in organic grasslands were related to the time since certification. Furthermore, discriminant analysis was used to test whether the respective management type can be deduced from observed isotopic abundances. Isotopic analyses revealed no significant differences in δ13C in hay and δ15N in both soil and hay between management types, but showed that δ13C abundances were significantly lower in soil of organic compared to conventional grasslands. Δδ15N values implied that management types did not substantially differ in nitrogen cycling. Only δ13C in soil and hay showed significant negative relationships with the time since certification. Thus, our result suggest that organic grasslands suffered less from drought stress compared to conventional grasslands most likely due to a benefit of higher plant species richness, as previously shown by manipulative biodiversity experiments. Finally, it was possible to correctly classify about two third of the samples according to their management using isotopic abundances in soil and hay. However, as more than half of the organic samples were incorrectly classified, we infer that more research is needed to improve this approach before it can be efficiently used in practice

  13. Optical Microscopy Characterization for Borehole U-15n#12 in Support of NCNS Source Physics Experiment

    SciTech Connect

    Wilson, Jennifer E.; Sussman, Aviva Joy

    2015-05-22

    Optical microscopy characterization of thin sections from corehole U-15n#12 is part of a larger material characterization effort for the Source Physics Experiment (SPE). The SPE program was conducted in Nevada with a series of explosive tests designed to study the generation and propagation of seismic waves inside Stock quartz monzonite. Optical microscopy analysis includes the following: 1) imaging of full thin sections (scans and mosaic maps); 2) high magnification imaging of petrographic texture (grain size, foliations, fractures, etc.); and 3) measurement of microfracture density.

  14. Numerical evaluation of subsoil diffusion of (15) N labelled denitrification products during employment of the (15) N gas flux method in the field

    NASA Astrophysics Data System (ADS)

    Well, Reinhard; Buchen, Caroline; Lewicka-Szczebak, Dominika; Ruoss, Nicolas

    2016-04-01

    Common methods for measuring soil denitrification in situ include monitoring the accumulation of 15N labelled N2 and N2O evolved from 15N labelled soil nitrate pool in soil surface chambers. Gas diffusion is considered to be the main accumulation process. Because accumulation of the gases decreases concentration gradients between soil and chamber over time, gas production rates are underestimated if calculated from chamber concentrations. Moreover, concentration gradients to the non-labelled subsoil exist, inevitably causing downward diffusion of 15N labelled denitrification products. A numerical model for simulating gas diffusion in soil was used in order to determine the significance of this source of error. Results show that subsoil diffusion of 15N labelled N2 and N2O - and thus potential underestimation of denitrification derived from chamber fluxes - increases with cover closure time as well as with increasing diffusivity. Simulations based on the range of typical gas diffusivities of unsaturated soils show that the fraction of subsoil diffusion after chamber closure for 1 hour is always significant with values up to >30 % of total production of 15N labelled N2 and N2O. Field experiments for measuring denitrification with the 15N gas flux method were conducted. The ability of the model to predict the time pattern of gas accumulation was evaluated by comparing measured 15N2 concentrations and simulated values.

  15. Far-infrared study of tracers of oxygen chemistry in diffuse clouds

    NASA Astrophysics Data System (ADS)

    Wiesemeyer, H.; Güsten, R.; Heyminck, S.; Hübers, H. W.; Menten, K. M.; Neufeld, D. A.; Richter, H.; Simon, R.; Stutzki, J.; Winkel, B.; Wyrowski, F.

    2016-01-01

    Context. The chemistry of the diffuse interstellar medium rests upon three pillars: exothermic ion-neutral reactions ("cold chemistry"), endothermic neutral-neutral reactions with significant activation barriers ("warm chemistry"), and reactions on the surfaces of dust grains. While warm chemistry becomes important in the shocks associated with turbulent dissipation regions, the main path for the formation of interstellar OH and H2O is that of cold chemistry. Aims: The aim of this study is to observationally confirm the association of atomic oxygen with both atomic and molecular gas phases, and to understand the measured abundances of OH and OH+ as a function of the available reservoir of H2. Methods: We obtained absorption spectra of the ground states of OH, OH+ and O i with high-velocity resolution, with GREAT onboard SOFIA, and with the THz receiver at the APEX. We analyzed them along with ancillary spectra of HF and CH from HIFI. To deconvolve them from the hyperfine structure and to separate the blend that is due to various velocity components on the sightline, we fit model spectra consisting of an appropriate number of Gaussian profiles using a method combining simulated annealing with downhill simplex minimization. Together with HF and/or CH as a surrogate for H2, and H i λ21 cm data, the molecular hydrogen fraction fNH2 = N(H2)/(N(H) + 2N(H2)) can be determined. We then investigated abundance ratios as a function of fNH2. Results: The column density of O i is correlated at a high significance with the amount of available molecular and atomic hydrogen, with an atomic oxygen abundance of 3 × 10-4 relative to H nuclei. While the velocities of the absorption features of OH and OH+ are loosely correlated and reflect the spiral arm crossings on the sightline, upon closer inspection they display an anticorrespondence. The arm-to-interarm density contrast is found to be higher in OH than in OH+. While both species can coexist, with a higher abundance in OH than

  16. The fate of nitrogen in grain cropping systems: a meta-analysis of 15N field experiments.

    PubMed

    Gardner, Jennifer B; Drinkwater, Laurie E

    2009-12-01

    Intensively managed grain farms are saturated with large inputs of nitrogen (N) fertilizer, leading to N losses and environmental degradation. Despite decades of research directed toward reducing N losses from agroecosystems, progress has been minimal, and the currently promoted best management practices are not necessarily the most effective. We investigated the fate of N additions to temperate grain agroecosystems using a meta-analysis of 217 field-scale studies that followed the stable isotope 15N in crops and soil. We compared management practices that alter inorganic fertilizer additions, such as application timing or reduced N fertilizer rates, to practices that re-couple the biogeochemical cycles of carbon (C) and N, such as organic N sources and diversified crop rotations, and analyzed the following response variables: 15N recovery in crops, total recovery of 15N in crops and soil, and crop yield. More of the literature (94%) emphasized crop recovery of 15N than total 15N recovery in crops and soil (58%), though total recovery is a more ecologically appropriate indicator for assessing N losses. Findings show wide differences in the ability of management practices to improve N use efficiency. Practices that aimed to increase crop uptake of commercial fertilizer had a lower impact on total 15N recovery (3-21% increase) than practices that re-coupled C and N cycling (30-42% increase). A majority of studies (66%) were only one growing season long, which poses a particular problem when organic N sources are used because crops recover N from these sources over several years. These short-term studies neglect significant ecological processes that occur over longer time scales. Field-scale mass balance calculations using the 15N data set show that, on average, 43 kg N x ha(-1) x yr(-1) was unaccounted for at the end of one growing season out of 114 kg N x ha(-1) x yr(-1), representing approximately 38% of the total 15N applied. This comprehensive assessment of

  17. Compound-specific 15N stable isotope probing of N assimilation by the soil microbial biomass: a new methodological paradigm in soil N cycling

    NASA Astrophysics Data System (ADS)

    Charteris, A. F.; Knowles, T. D. J.; Michaelides, K.; Evershed, R. P.

    2015-10-01

    A compound-specific nitrogen-15 stable isotope probing (15N-SIP) technique is described which allows investigation of the fate of inorganic- or organic-N amendments to soils. The technique uses gas chromatography-combustion-isotope ratio mass spectrometry (GC-C-IRMS) to determine the δ15N values of individual amino acids (AAs; determined as N-acetyl, O-isopropyl derivatives) as proxies of biomass protein production. The δ15N values are used together with AA concentrations to quantify N assimilation of 15N-labelled substrates by the soil microbial biomass. The utility of the approach is demonstrated through incubation experiments using inorganic 15N-labelled substrates ammonium (15NH4+) and nitrate (15NO3-) and an organic 15N-labelled substrate, glutamic acid (15N-Glu). Assimilation of all the applied substrates was undetectable based on bulk soil properties, i.e. % total N (% TN), bulk soil N isotope composition and AA concentrations, all of which remained relatively constant throughout the incubation experiments. In contrast, compound-specific AA δ15N values were highly sensitive to N assimilation, providing qualitative and quantitative insights into the cycling and fate of the applied 15N-labelled substrates. The utility of this 15N-AA-SIP technique is considered in relation to other currently available methods for investigating the microbially-mediated assimilation of nitrogenous substrates into the soil organic N pool. This approach will be generally applicable to the study of N cycling in any soil, or indeed, in any complex ecosystem.

  18. Glacial-interglacial dynamics of Antarctic firn columns: comparison between simulations and ice core air-δ15N measurements

    NASA Astrophysics Data System (ADS)

    Capron, E.; Landais, A.; Buiron, D.; Cauquoin, A.; Chappellaz, J.; Debret, M.; Jouzel, J.; Leuenberger, M.; Martinerie, P.; Masson-Delmotte, V.; Mulvaney, R.; Parrenin, F.; Prié, F.

    2012-12-01

    Correct estimate of the firn lock-in depth is essential for correctly linking gas and ice chronologies in ice cores studies. Here, two approaches to constrain the firn depth evolution in Antarctica are presented over the last deglaciation: output of a firn densification model and measurements of δ15N of N2 in air trapped in ice core. Since the firn densification process is largely governed by surface temperature and accumulation rate, we have investigated four ice cores drilled in coastal (Berkner Island, BI, and James Ross Island, JRI) and semi coastal (TALDICE and EPICA Dronning Maud Land, EDML) Antarctic regions. Combined with available δ15N measurements performed from the EPICA Dome C (EDC) site, the studied regions encompass a large range of surface accumulation rate and temperature conditions. While firn densification simulations are able to correctly represent most of the δ15N trends over the last deglaciation measured in the EDC, BI, TALDICE and EDML ice cores, they systematically fail to capture BI and EDML δ15N glacial levels, a mismatch previously seen for Central East Antarctic ice cores. Using empirical constraints of the EDML gas-ice depth offset during the Laschamp event (~ 41 ka), we can rule out the existence of a large convective zone as the explanation of the glacial firn model-δ15N data mismatch for this site. The good match between modelled and measured δ15N at TALDICE as well as the lack of any clear correlation between insoluble dust concentration in snow and δ15N records in the different ice cores suggest that past changes in loads of impurities are not the only main driver of glacial-interglacial changes in firn lock-in depth. We conclude that firn densification dynamics may instead be driven mostly by accumulation rate changes. The mismatch between modelled and measured δ15N may be due to inaccurate reconstruction of past accumulation rate or underestimated influence of accumulation rate in firnification models.

  19. Tracer studies of transport processes in the tidal Hudson River: A comparison of SF6 and a fluorescent dye

    NASA Astrophysics Data System (ADS)

    Ho, D. T.; Schlosser, P.; Houghton, R.; Caplow, T.

    2004-12-01

    Fluorescent dyes have frequently been used to study transport processes such as net advection and longitudinal dispersion in rivers. Recently, it has been shown that sulfur hexafluoride (SF6) is a viable alternative to dyes, while offering many advantages. For example, SF6 is less expensive than dye, and has a greater dynamic range. As a result, experiments can be conducted on longer timescales and greater spatial scales. Also, because SF6 is a gas, its loss across the air-water interface can be used to quantify the gas transfer velocity, which affects the fate of volatile and semi-volatile compounds. Here, we present results from a dual tracer release conducted in the tidal Hudson River using a fluorescent dye (Fluorescein; C20H10O5Na2) and SF6. Fluorescein was surveyed for 5 days (until it was undetectable) and SF6 was surveyed for 11 days. The dye resolves initial vertical mixing on the first day, and then net advection and longitudinal dispersion on subsequent days, while the SF6 provides information on net advection and longitudinal mixing on larger spatial and longer time scales. Transport processes (net advection and longitudinal dispersion) calculated from the two methods were consistent for the first four days, and start to deviate on the fifth day when the signal to noise ratio of the dye deteriorated. Initial results indicate that for the first four days, net advection was 3.0 ± 0.1 km d-1, and longitudinal dispersion coefficients were 24.6 ± 6.6 and 19.6 ± 2.5 m2 s-1 for SF6 and dye, respectively. The SF6 results for the longer timescale and larger special scale will be discussed in the context of similar experiments conducted in other reaches of the tidal Hudson River.

  20. Laminar segregation of GABAergic neurons in the avian nucleus isthmi pars magnocellularis: a retrograde tracer and comparative study.

    PubMed

    Faunes, Macarena; Fernández, Sara; Gutiérrez-Ibáñez, Cristián; Iwaniuk, Andrew N; Wylie, Douglas R; Mpodozis, Jorge; Karten, Harvey J; Marín, Gonzalo

    2013-06-01

    The isthmic complex is part of a visual midbrain circuit thought to be involved in stimulus selection and spatial attention. In birds, this circuit is composed of the nuclei isthmi pars magnocellularis (Imc), pars parvocellularis (Ipc), and pars semilunaris (SLu), all of them reciprocally connected to the ipsilateral optic tectum (TeO). The Imc conveys heterotopic inhibition to the TeO, Ipc, and SLu via widespread γ-aminobutyric acid (GABA)ergic axons that allow global competitive interactions among simultaneous sensory inputs. Anatomical studies in the chick have described a cytoarchitectonically uniform Imc nucleus containing two intermingled cell types: one projecting to the Ipc and SLu and the other to the TeO. Here we report that in passerine species, the Imc is segregated into an internal division displaying larger, sparsely distributed cells, and an external division displaying smaller, more densely packed cells. In vivo and in vitro injections of neural tracers in the TeO and the Ipc of the zebra finch demonstrated that neurons from the external and internal subdivisions project to the Ipc and the TeO, respectively, indicating that each Imc subdivision contains one of the two cell types hodologically defined in the chick. In an extensive survey across avian orders, we found that, in addition to passerines, only species of Piciformes and Rallidae exhibited a segregated Imc, whereas all other groups exhibited a uniform Imc. These results offer a comparative basis to investigate the functional role played by each Imc neural type in the competitive interactions mediated by this nucleus.

  1. Nitrate Reduction in a Groundwater Microcosm Determined by 15N Gas Chromatography-Mass Spectrometry

    PubMed Central

    Bengtsson, Göran; Annadotter, Heléne

    1989-01-01

    Aerobic and anaerobic groundwater continuous-flow microcosms were designed to study nitrate reduction by the indigenous bacteria in intact saturated soil cores from a sandy aquifer with a concentration of 3.8 mg of NO3−-N liter−1. Traces of 15NO3− were added to filter-sterilized groundwater by using a Darcy flux of 4 cm day−1. Both assimilatory and dissimilatory reduction rates were estimated from analyses of 15N2, 15N2O, 15NH4+, and 15N-labeled protein amino acids by capillary gas chromatography-mass spectrometry. N2 and N2O were separated on a megabore fused-silica column and quantified by electron impact-selected ion monitoring. NO3− and NH4+ were analyzed as pentafluorobenzoyl amides by multiple-ion monitoring and protein amino acids as their N-heptafluorobutyryl isobutyl ester derivatives by negative ion-chemical ionization. The numbers of bacteria and their [methyl-3H]thymidine incorporation rates were simultaneously measured. Nitrate was completely reduced in the microcosms at a rate of about 250 ng g−1 day−1. Of this nitrate, 80 to 90% was converted by aerobic denitrification to N2, whereas only 35% was denitrified in the anaerobic microcosm, where more than 50% of NO3− was reduced to NH4+. Assimilatory reduction was recorded only in the aerobic microcosm, where N appeared in alanine in the cells. The nitrate reduction rates estimated for the aquifer material were low in comparison with rates in eutrophic lakes and coastal sediments but sufficiently high to remove nitrate from an uncontaminated aquifer of the kind examined in less than 1 month. PMID:16348048

  2. Tracers in rainfall simulation experiments to study the onset of the wet season in Eastern Mediterranean limestone environments

    NASA Astrophysics Data System (ADS)

    Lange, Jens

    2010-05-01

    from adjacent rocky areas. Once the plot was saturated, 80-90% of the applied rainfall became surface runoff. About 14% of the flow collected during the second day originated from water applied during the first day. Both water sources obviously mixed in saturated soil reservoirs and contributed in variable percentages to surface flow. The second plot was located above a karstic cave. Additionally to soil moisture and surface runoff, the drip response of cave stalactites was measured. This time electrical conductivity and bromide were used to study recharge processes, water origin and mixing inside a 28 m vadose zone. Bromide tracing allowed identification of quick direct flow paths. Under dry preconditions, 80 mm of artificial rainfall applied in less than seven hours was not enough to initiate significant downward water percolation. Most water was required to fill uppermost soil and rock storages. During the second day of sprinkling, higher water contents in soils and karst cavities facilitated piston flow effects and a more intense response of the cave drips. Both experiments yielded point estimates for seasonal thresholds of runoff generation and groundwater recharge. The filling of the unsaturated zone, including soil and rock storages, was found to be an important precondition for the onset of surface runoff and groundwater recharge. By mixing analysis, continuously applied tracers identified the dominating processes: saturation excess overland flow for runoff generation and piston flow for water percolation. Overall, a higher seasonal threshold for water percolation than for the generation of surface runoff was found.

  3. PET tracer development—a tale of mice and men

    PubMed Central

    Hicks, Rodney J; Dorow, Donna; Roselt, Peter

    2006-01-01

    PET scanning is an emerging technology for the clinical evaluation of many disease processes in man. The vast majority of clinical positron emission tomography (PET) studies are performed using a single tracer, fluorodeoxyglucose. Despite the excellent diagnostic performance of this tracer, it has recognised limitations. New tracers offer the potential to both address these limitations, and to establish new applications for PET. Small animal PET is a logical technique for validating new tracers relevant to human diseases. However, interspecies differences in the handling of chemicals may significantly influence the handling of novel tracers. This requires caution in extrapolating findings in animals to expectations of performance in man. Already there are several examples where biodistribution studies in mice would not have predicted the clinical utility of existing PET tracers. Nevertheless, application of a systematic approach to tracer development is likely to speed transition of new tracers from animals into man. PMID:17114061

  4. Monitoring High Velocity Salt Tracer via 4D Electrical Resistivity Tomography - Possibility for Salt Tracer Tomography

    NASA Astrophysics Data System (ADS)

    Doro, K. O.; Cirpka, O. A.; Patzelt, A.; Leven, C.

    2014-12-01

    Hydrogeological testing in a tomographic sequence as shown by the use of hydraulic tomography, allows an improvement of the spatial resolution of subsurface parameters. In this regard, recent studies show increasing interest in tracer tomography which involves sequential and spatially separated tracer injections and the measurement of their corresponding tracer breakthrough at different locations and depths. Such concentration measurements however require large experimental efforts and can be simplified by geophysical tracer monitoring techniques such as electrical resistivity. In this study, we present the use of 4-D, cross-hole electrical resistivity tomography (ERT) for monitoring salt tracer experiments in high velocity flow fields. For our study, we utilized a set up that enables the conduction of salt tracer experiments with complete recovery within 84 hours over a transport distance of 16 m. This allows the repetition of the experiments with different injection depths for a tomographic salt tracer testing. For ERT monitoring, we designed modular borehole electrodes for repeated usage in a flexible manner. We also assess the use of a high speed resistivity data acquisition mode for field scale tracer monitoring ensuring high spatial and temporal resolution without sacrificing data accuracy. We applied our approach at the Lauswiesen test site, Tübingen, Germany. In our 10 m × 10 m tracer monitoring domain with 16 borehole electrodes, we acquired 4650 data points in less than 18 minutes for each monitoring cycle. Inversion results show that the tracer could be successfully imaged using this approach. The results show that repeated salt tracer tests can be efficiently monitored at a high resolution with ERT which gives the possibility for salt tracer tomography at field scale. Our results also provide a data base for extending current hydrogeophysical inversion approaches to field scale data.

  5. (15)N in tree rings as a bio-indicator of changing nitrogen cycling in tropical forests: an evaluation at three sites using two sampling methods.

    PubMed

    van der Sleen, Peter; Vlam, Mart; Groenendijk, Peter; Anten, Niels P R; Bongers, Frans; Bunyavejchewin, Sarayudh; Hietz, Peter; Pons, Thijs L; Zuidema, Pieter A

    2015-01-01

    Anthropogenic nitrogen deposition is currently causing a more than twofold increase of reactive nitrogen input over large areas in the tropics. Elevated (15)N abundance (δ(15)N) in the growth rings of some tropical trees has been hypothesized to reflect an increased leaching of (15)N-depleted nitrate from the soil, following anthropogenic nitrogen deposition over the last decades. To find further evidence for altered nitrogen cycling in tropical forests, we measured long-term δ(15)N values in trees from Bolivia, Cameroon, and Thailand. We used two different sampling methods. In the first, wood samples were taken in a conventional way: from the pith to the bark across the stem of 28 large trees (the "radial" method). In the second, δ(15)N values were compared across a fixed diameter (the "fixed-diameter" method). We sampled 400 trees that differed widely in size, but measured δ(15)N in the stem around the same diameter (20 cm dbh) in all trees. As a result, the growth rings formed around this diameter differed in age and allowed a comparison of δ(15)N values over time with an explicit control for potential size-effects on δ(15)N values. We found a significant increase of tree-ring δ(15)N across the stem radius of large trees from Bolivia and Cameroon, but no change in tree-ring δ(15)N values over time was found in any of the study sites when controlling for tree size. This suggests that radial trends of δ(15)N values within trees reflect tree ontogeny (size development). However, for the trees from Cameroon and Thailand, a low statistical power in the fixed-diameter method prevents to conclude this with high certainty. For the trees from Bolivia, statistical power in the fixed-diameter method was high, showing that the temporal trend in tree-ring δ(15)N values in the radial method is primarily caused by tree ontogeny and unlikely by a change in nitrogen cycling. We therefore stress to account for tree size before tree-ring δ(15)N values can be properly

  6. (15)N in tree rings as a bio-indicator of changing nitrogen cycling in tropical forests: an evaluation at three sites using two sampling methods.

    PubMed

    van der Sleen, Peter; Vlam, Mart; Groenendijk, Peter; Anten, Niels P R; Bongers, Frans; Bunyavejchewin, Sarayudh; Hietz, Peter; Pons, Thijs L; Zuidema, Pieter A

    2015-01-01

    Anthropogenic nitrogen deposition is currently causing a more than twofold increase of reactive nitrogen input over large areas in the tropics. Elevated (15)N abundance (δ(15)N) in the growth rings of some tropical trees has been hypothesized to reflect an increased leaching of (15)N-depleted nitrate from the soil, following anthropogenic nitrogen deposition over the last decades. To find further evidence for altered nitrogen cycling in tropical forests, we measured long-term δ(15)N values in trees from Bolivia, Cameroon, and Thailand. We used two different sampling methods. In the first, wood samples were taken in a conventional way: from the pith to the bark across the stem of 28 large trees (the "radial" method). In the second, δ(15)N values were compared across a fixed diameter (the "fixed-diameter" method). We sampled 400 trees that differed widely in size, but measured δ(15)N in the stem around the same diameter (20 cm dbh) in all trees. As a result, the growth rings formed around this diameter differed in age and allowed a comparison of δ(15)N values over time with an explicit control for potential size-effects on δ(15)N values. We found a significant increase of tree-ring δ(15)N across the stem radius of large trees from Bolivia and Cameroon, but no change in tree-ring δ(15)N values over time was found in any of the study sites when controlling for tree size. This suggests that radial trends of δ(15)N values within trees reflect tree ontogeny (size development). However, for the trees from Cameroon and Thailand, a low statistical power in the fixed-diameter method prevents to conclude this with high certainty. For the trees from Bolivia, statistical power in the fixed-diameter method was high, showing that the temporal trend in tree-ring δ(15)N values in the radial method is primarily caused by tree ontogeny and unlikely by a change in nitrogen cycling. We therefore stress to account for tree size before tree-ring δ(15)N values can be properly

  7. Incorporation of (15)N-TNT transformation products into humifying plant organic matter as revealed by one- and two-dimensional solid state NMR spectroscopy.

    PubMed

    Knicker, Heike

    2003-06-01

    Solid-state double cross polarization magic angle spinning (DCPMAS) 15N 13C nuclear magnetic resonance (NMR) spectroscopy was applied to study the incorporation of TNT transformation products into humifying plant organic matter. For this approach, 13C-enriched plant material (Lolium perenne) was mixed with quartz sand and aerobically incubated for 11 months after addition of 15N(3)-2,4,6-trinitrotoluene (TNT). After successive extraction of the incubate with water, methanol and ethyl acetate, approximately 60% of the 15N added as 15N(3)-TNT (15N(add)) remained in the solid organic residue (SOR-fraction). The acid insoluble fraction (AI) obtained after NaOH and HCl extractions contained approximately 20% of 15N(add). For both fractions, 15N NMR spectroscopy revealed an almost complete reduction of the TNT after 11 months of aerobic incubation. Most of the reduced nitrogen groups underwent further condensation. The corresponding DCPMAS NMR spectra allowed the identification of amides that are further substituted by alkyl groups that resist even acid hydrolysis. This assigns them to relatively stable compounds rather than to newly synthesized microbial peptides. The results of this study suggest further that the covalent binding of TNT transformation products to plant derived organic matter is mediated by alkylation and acetylation reactions, rather than by 1,4 addition of TNT-derived nitrogenous groups to quinones of the humic material.

  8. Measurement of (15)N enrichment of glutamine and urea cycle amino acids derivatized with 6-aminoquinolyl-N-hydroxysuccinimidyl carbamate using liquid chromatography-tandem quadrupole mass spectrometry.

    PubMed

    Nakamura, Hidehiro; Karakawa, Sachise; Watanabe, Akiko; Kawamata, Yasuko; Kuwahara, Tomomi; Shimbo, Kazutaka; Sakai, Ryosei

    2015-05-01

    6-Aminoquinolyl-N-hydroxysuccinimidyl carbamate (AQC) is an amino acid-specific derivatizing reagent that has been used for sensitive amino acid quantification by liquid chromatography-tandem quadrupole mass spectrometry (LC-MS/MS). In this study, we aimed to evaluate the ability of this method to measure the isotopic enrichment of amino acids and to determine the positional (15)N enrichment of urea cycle amino acids (i.e., arginine, ornithine, and citrulline) and glutamine. The distribution of the M and M+1 isotopomers of each natural AQC-amino acid was nearly identical to the theoretical distribution. The standard deviation of the (M+1)/M ratio for each amino acid in repeated measurements was approximately 0.1%, and the ratios were stable regardless of the injected amounts. Linearity in the measurements of (15)N enrichment was confirmed by measuring a series of (15)N-labeled arginine standards. The positional (15)N enrichment of urea cycle amino acids and glutamine was estimated from the isotopic distribution of unique fragment ions generated at different collision energies. This method was able to identify their positional (15)N enrichment in the plasma of rats fed (15)N-labeled glutamine. These results suggest the utility of LC-MS/MS detection of AQC-amino acids for the measurement of isotopic enrichment in (15)N-labeled amino acids and indicate that this method is useful for the study of nitrogen metabolism in living organisms.

  9. Losses in the fluorescent tracer used in hydrodynamic modeling of constructed wetlands studied by laser induced fluorescence

    NASA Astrophysics Data System (ADS)

    Plazas, Lucero; Rosero, Edison; Solarte, Efraín; Sandoval, Jhon; Peña, Miguel

    2009-08-01

    Fluorescent tracer trials are performed to obtain useful information for hydrodynamic modeling. Particularly they have been used in constructed wetlands, aimed for residual water treatment, in order to find residence time distribution for particles entering the system and, in general, to know the flux pattern. Nevertheless, it has been reported that some tracers, as Rhodamine WT, exhibit adsorption phenomena over the substrate. This situation has to be considered in the analysis of residence time distribution curves, taking into account advection-dispersion processes which are given by the diffusion modified equation. Laser Induced Fluorescence (LIF) with a Nd:YAG laser (532 nm; 35mW), was used to determine Rhodamine WT accumulated concentration. Through adsorption coefficients obtained experimentally, an advection - dispersion model for solute transport in a subsurface flow constructed wetland was evaluated. Including this phenomenon allows to optimize the model, and another important condition is added in the behavior prediction of these complex ecosystems.

  10. Methodology Measuring Rare Earth Elements in High TDS Reservoir Brines Application as Natural Tracers in CCUS Studies

    NASA Astrophysics Data System (ADS)

    Smith, W.; Mcling, T. L.; Smith, R. W.; Neupane, H.

    2013-12-01

    In recent years rare earth elements (REE) have been demonstrated to be useful natural tracers for geochemical processes in aqueous environments. The application of REE's to carbon dioxide utilization and storage (CCUS) could provide researchers with a sensitive, inexpensive tool for tracking the movement of CO2 and displaced formation brines. By definition, geologic reservoirs that have been deemed suitable for carbon capture and storage contain formation brine with total dissolved solids (TDS) greater than 10,000 ppm and often these formation brines exceed 75,000 ppm TDS. This high TDS water makes it very difficult to measure REE, which typically occur at part per trillion concentrations. Critical to the use of REE for CCUS studies is the development of a procedure, which allows for the pre-concentration of REE's across a wide range of water quality. Additionally, due to the large number of samples that will need analysis, any developed procedure must be inexpensive, reproducible, and quick to implement. As part of the Big Sky Carbon Sequestration Project the INL's Center for Advance Energy Studies is developing REE pre-concentration procedures based on methods reported in the literature. While there are many REE pre-concentration procedures in the literature, our tests have shown these methods have difficulty at TDS greater than seawater (roughly 35,000 ppm TDS). Therefore, the ability to quantitatively measure REE's in formation brines with very high TDS has required the modification of an already developed procedure. After careful consideration and testing we selected methods modified after those described by Kingston et al., 1978 and Strachan et al., 1989 utilizing chelating media for very high TDS waters and ion-exchange media as detailed by Crock et al., 1984; Robinson et al., 1985; and Stetzenbach et al., 1994 for low TDS (<10,000 ppm TDS) waters. These modified procedures have been successfully tested in our laboratory and have proven effective in greatly

  11. Tracer attenuation in groundwater

    NASA Astrophysics Data System (ADS)

    Cvetkovic, Vladimir

    2011-12-01

    The self-purifying capacity of aquifers strongly depends on the attenuation of waterborne contaminants, i.e., irreversible loss of contaminant mass on a given scale as a result of coupled transport and transformation processes. A general formulation of tracer attenuation in groundwater is presented. Basic sensitivities of attenuation to macrodispersion and retention are illustrated for a few typical retention mechanisms. Tracer recovery is suggested as an experimental proxy for attenuation. Unique experimental data of tracer recovery in crystalline rock compare favorably with the theoretical model that is based on diffusion-controlled retention. Non-Fickian hydrodynamic transport has potentially a large impact on field-scale attenuation of dissolved contaminants.

  12. The coral δ15N record of terrestrial nitrate loading varies with river catchment land use

    NASA Astrophysics Data System (ADS)

    Yamazaki, A.; Watanabe, T.; Tsunogai, U.; Hasegawa, H.; Yamano, H.

    2015-03-01

    We analysed the nitrogen isotopes in two coral cores (δ15Ncoral) from the mouth of the Todoroki River, Ishigaki Island, Japan, to examine whether the δ15Ncoral reflects the run-off of nitrate related to the land use in the river catchment. The two coral cores were used to examine the seasonal variation in δ15Ncoral for 14 years (CORE1; 1993-2007) and the annual variation of δ15Ncoral for 52 years (CORE2; 1958-2010). In CORE1, the 5-month running mean of δ15Ncoral was positively correlated with that of monthly precipitation, excluding all strong precipitation events (>150 mm d-1). In CORE2, the δ15Ncoral mean in the earlier period (1958-1980) was 1.0 ‰ greater than that in the later period (1981-2010). The annual averages of δ15Ncoral are positively correlated with the total precipitation in the rainy season (May-June) for both time periods. The difference in the δ15Ncoral between the earlier and later periods is probably caused by the land use changed from paddy fields with 15N-rich manure to sugar cane fields in the early 1980s. Although some uncertainties still remain regarding the precision of δ15N coral proxy records, this study emphasises the clear potential for their use in reconstructing terrestrial nitrate discharge records from corals.

  13. Automated Protein Turnover Calculations from 15N Partial Metabolic Labeling LC/MS Shotgun Proteomics Data

    PubMed Central

    Lyon, David; Castillejo, Maria Angeles; Staudinger, Christiana; Weckwerth, Wolfram; Wienkoop, Stefanie; Egelhofer, Volker

    2014-01-01

    Protein turnover is a well-controlled process in which polypeptides are constantly being degraded and subsequently replaced with newly synthesized copies. Extraction of composite spectral envelopes from complex LC/MS shotgun proteomics data can be a challenging task, due to the inherent complexity of biological samples. With partial metabolic labeling experiments this complexity increases as a result of the emergence of additional isotopic peaks. Automated spectral extraction and subsequent protein turnover calculations enable the analysis of gigabytes of data within minutes, a prerequisite for systems biology high throughput studies. Here we present a fully automated method for protein turnover calculations from shotgun proteomics data. The approach enables the analysis of complex shotgun LC/MS 15N partial metabolic labeling experiments. Spectral envelopes of 1419 peptides can be extracted within an hour. The method quantifies turnover by calculating the Relative Isotope Abundance (RIA), which is defined as the ratio between the intensity sum of all heavy (15N) to the intensity sum of all light (14N) and heavy peaks. To facilitate this process, we have developed a computer program based on our method, which is freely available to download at http://promex.pph.univie.ac.at/protover. PMID:24736476

  14. Precursor discrimination of designer drug benzylpiperazine using δ13C and δ15N stable isotopes.

    PubMed

    Beckett, Nicola M; Grice, Darren I; Carter, James F; Cresswell, Sarah L

    2015-01-01

    Advances in analytical technology and emerging techniques have resulted in the increased exploitation of chemical and isotopic profiling for source linkage/discrimination of illicit drugs for forensic purposes. Although not routinely used for illicit drug investigations, such information has been obtained and its application demonstrated through the use of isotope ratio mass spectrometry (IRMS). There is a solid platform of research available relating to the isotopic analysis of methylenedioxymethamphetamine (MDMA) and methamphetamine (MA), however with the recently flourishing designer drug market it was of interest to examine the isotopic profiles of the popular 'party drug' benzylpiperazine hydrochloride (BZP·HCl). A preliminary analysis of δ13C and δ15N isotopic ratios in BZP·HCl products and corresponding synthetic intermediates (piperazine·HCl) synthesized in-house from three different precursor suppliers was conducted using IRMS. Analysis of the δ13C and δ15N isotopic data indicated that discrimination and correct grouping of all the intermediates and some of the product samples examined in this study were achievable.

  15. Selective observation of biologically important 15N-labeled metabolites in isolated rat brain and liver by 1H-detected multiple-quantum-coherence spectroscopy

    NASA Astrophysics Data System (ADS)

    Kanamori, Keiko; Ross, Brian D.; Parivar, Farhad

    Four cerebral metabolites of importance in neurotransmission, serotonin, L-tryptophan, L-glutamine, and N-acetyl- L-aspartate, and two hepatic urea-cycle intermediates, citrulline and urea, were found to be observable by 1H- 15N heteronuclear multiple-quantum-coherence (HMQC) spectroscopy in aqueous solution at physiological pH and temperature, through the protons spin-coupled to their indole, amide, or ureido nitrogen. Their 1H chemical shifts were well dispersed over a 5-10 ppm region while the 1J 15N- 1H values were 87-99 Hz. For [γ- 15N]glutamine, a 50- to 100-fold increase in sensitivity over direct 15N detection was achieved, in contrast to a 2-fold increase by the polarization-transfer method. In the isolated brain of portacaval-shunted rats, the amide protons of biologically 15N-enriched [γ- 15N]glutamine were observed in 2 min of acquisition, with suppression of proton signals from all other cerebral metabolites. In isolated liver of 15N-enriched control rats, [ 15NIurea protons were observed in 16 min. The HMQC method is likely to be effective for the in vivo study of cerebral and hepatic nitrogen metabolism.

  16. Influence of roots and mycorrhiza on the internal nitrogen cycle in an organic forest soil ­revealed by a 15N tracing experiment

    NASA Astrophysics Data System (ADS)

    Holz, M.; Rutting, T.; Klemedtsson, L.; Kuzyakov, Y.

    2014-12-01

    The cycle of nitrogen in soil is complex, consisting of many simultaneous occurring transformation processes. So far, microorganisms have been thought to govern N cycling in soil. Nevertheless, plant roots and their associated mycorrhizal symbionts may exert control on N turnover for example by input of labile C to soil. However, studies investigating the effect of roots on gross N turnover rates are scarce. We conducted a 15N tracer study under field conditions to reveal the effect of plants on soil N cycle. The experiment includes three treatments: (a) control, (b) excluding roots and (c) excluding roots + mycorrhiza. On the study site, exclusion of roots + mycorrhiza has previously been shown to increase N2O emissions which indicate that plants affect internal N cycling. 15NH4NO3 and NH415NO3 were given to the soil and traced for a period of 10 days. Gross N turnover rates were determined applying a numerical 15N tracing model. Results on N turnover rates showed that roots and their fungal symbionts increased N cycling probably by input of labile C to soil which may results in an activation of the microbial biomass. While gross N mineralization increased by 270 and 313 % compared to the treatment excluding roots + mycorrhiza, NH4+ immobilization increased by 402 and 489 %. Differences in ammonium and nitrate immobilization further indicated that ammonium was the preferred N source for roots and microorganisms. While ammonium availability decreased with trenching (0.59 compared to -0.47 and -0.96 μg N g-1 d-1), the opposite was true for nitrate (0.50 compared to 2.08 and 2.18 μg N g-1 d-1), explaining the increased N2O emissions which were likely caused by denitrification. Further, plants increased dissimilarity nitrate reduction to ammonium (DNRA) and affected autotrophic nitrification probably by the release of nitrification inhibitors and by influencing ammonium availability. We conclude that plants and their mycorrhizal symbionts actively control N cycling

  17. Variation in hair δ(13)C and δ (15)N values in long-tailed macaques (Macaca fascicularis) from Singapore.

    PubMed

    Schillaci, Michael A; Castellini, J Margaret; Stricker, Craig A; Jones-Engel, Lisa; Lee, Benjamin P Y-H; O'Hara, Todd M

    2014-01-01

    Much of the primatology literature on stable isotope ratios of carbon (δ(13)C) and nitrogen (δ(15)N) has focused on African and New World species, with comparatively little research published on Asian primates. Here we present hair δ(13)C and δ(15)N isotope values for a sample of 33 long-tailed macaques from Singapore. We evaluate the suggestion by a previous researcher that forest degradation and biodiversity loss in Singapore have led to a decline in macaque trophic level. The results of our analysis indicated significant spatial variability in δ(13)C but not δ(15)N. The range of variation in δ(13)C was consistent with a diet based on C3 resources, with one group exhibiting low values consistent with a closed canopy environment. Relative to other macaque species from Europe and Asia, the macaques from Singapore exhibited a low mean δ(13)C value but mid-range mean δ(15)N value. Previous research suggesting a decline in macaque trophic level is not supported by the results of our study.

  18. Variation in hair δ13C and δ15N values in long-tailed macaques (Macaca fascicularis) from Singapore

    USGS Publications Warehouse

    Schillaci, Michael A.; Castellini, J. Margaret; Stricker, Craig A.; Jones-Engel, Lisa; Lee, Benjamin P.Y.-H.

    2014-01-01

    Much of the primatology literature on stable isotope ratios of carbon (δ13C) and nitrogen (δ15N) has focused on African and New World species, with comparatively little research published on Asian primates. Here we present hair δ13C and δ15N isotope values for a sample of 33 long-tailed macaques from Singapore. We evaluate the suggestion by a previous researcher that forest degradation and biodiversity loss in Singapore have led to a decline in macaque trophic level. The results of our analysis indicated significant spatial variability in δ13C but not δ15N. The range of variation in δ13C was consistent with a diet based on C3 resources, with one group exhibiting low values consistent with a closed canopy environment. Relative to other macaque species from Europe and Asia, the macaques from Singapore exhibited a low mean δ13C value but mid-range mean δ15N value. Previous research suggesting a decline in macaque trophic level is not supported by the results of our study.

  19. The influence of fish cage culture on δ13C and δ15N of filter-feeding Bivalvia (Mollusca).

    PubMed

    Benedito, E; Figueroa, L; Takeda, A M; Manetta, G I

    2013-11-01

    The objective of this study was to evaluate the effect of Oreochromis niloticus cage culture promoted variations in the δ13C and δ15N in Corbicula fluminea (Mollusca; Bivalvia) and in the sediment of an aquatic food web. Samples were taken before and after net cage installation in the Rosana Reservoir (Paranapanema River, PR-SP). Samples of specimens of the bivalve filterer C. fluminea and samples of sediment were collected using a modified Petersen grab. All samples were dried in an oven (60 °C) for 72 hours, macerated to obtain homogenous fine powders and sent for carbon (δ13C) and nitrogen (δ15N) isotopic value analysis in a mass spectrometer. There were significant differences in the δ13C and δ15N values of the invertebrate C. fluminea between the beginning and the end of the experiment. There were no differences between the δ13C and δ15N values of sediment. These results indicate that the installation of fish cage culture promoted impacts in the isotopic composition of the aquatic food web organisms, which could exert influence over the native species and the ecosystem.

  20. Synthesis and biosynthesis of {sup 13}C-, {sup 15}N-labeled deoxynucleosides useful for biomolecular structural determinations

    SciTech Connect

    Ashburn, D.A.; Garcia, K.; Hanners, J.L.; Silks, L.A. III; Unkefer, C.J.

    1994-12-01

    Currently, there is a great emphasis on elucidating the structure, function, and dynamics of DNA. Much of the research involved in this study uses nuclear magnetic resonance (NMR) spectroscopy. Effective use of NMR spectroscopy for DNA molecules with mw > 10,000 requires stable isotope enrichment. We present strategies for site-specific isotopic labeling of the purine bases adenosine and guanosine and the biosynthesis of (U-{sup 13}C, {sup 15}N) DNA from methylotropic bacteria. With commercially available 6-chloropurine, an effective two-step route leads to 2{prime}-deoxy-(amino-{sup 15}N)adenosine (dA). The resulting d(amino-{sup 15}N)A is used in a series of reactions to synthesize 2{prime}-deoxy-(2-{sup 13}C,1,amino-{sup 15}N{sub 2})guanosine or any combination thereof. An improved biosynthesis of labeled DNA has been accomplished using Methylobacterium extorquens AS1. Each liter of growth medium contains 4 g of methanol to yield 1 g of lyophilized cells. As much as 200 mg of RNA per liter of culture has been obtained. We are currently developing large-scale isolation protocols. General synthetic pathways to oligomeric DNA will be presented.

  1. Variation in hair δ13C and δ15N values in long-tailed macaques (Macaca fascicularis) from Singapore

    PubMed Central

    Castellini, J. Margaret; Stricker, Craig A.; Jones-Engel, Lisa; Lee, Benjamin P.Y.-H.; O'Hara, Todd M.

    2015-01-01

    Much of the primatology literature on stable isotope ratios of carbon (δ13C) and nitrogen (δ15N) has focused on African and New World species, with comparatively little research published on Asian primates. Here we present hair δ13C and δ15N isotope values for a sample of 33 long-tailed macaques from Singapore. We evaluate the suggestion by a previous researcher that forest degradation and biodiversity loss in Singapore have led to a decline in macaque trophic level. The results of our analysis indicated significant spatial variability in δ13C but not δ15N. The range of variation in δ13C was consistent with a diet based on C3 resources, with one group exhibiting low values consistent with a closed canopy environment. Relative to other macaque species from Europe and Asia, the macaques from Singapore exhibited a low mean δ13C value but mid-range mean δ15N value. Previous research suggesting a decline in macaque trophic level is not supported by the results of our study. PMID:23729223

  2. First Experimental Measurement of the {sup 18}O(p,{alpha}){sup 15}N Reaction at Astrophysical Energies

    SciTech Connect

    La Cognata, M.; Sergi, M. L.; Spitaleri, C.; Cherubini, S.; Gulino, M.; Kiss, G.; Lamia, L.; Pizzone, R. G.; Romano, S.; Mukhamedzhanov, A.; Goldberg, V.; Tribble, R.; Coc, A.; Hammache, F.; Sereville, N. de; Tumino, A.

    2010-11-24

    The {sup 18}O(p,{alpha}){sup 15}N and {sup 17}O(p,{alpha}){sup 14}N reactions are of primary importance in several as-trophysical scenarios, including nucleosynthesis inside Asymptotic Giant Branch stars and oxygen and nitrogen isotopic ratios in meteorite grains. They are also key reactions to understand exotic systems such as R-Coronae Borealis stars and novae. Thus, the measurement of their cross sections in the low energy region can be crucial to reduce the nuclear uncertainty on theoretical predictions, because the resonance parameters are poorly determined. The Trojan Horse Method, in its newly developed form particularly suited to investigate low-energy resonances, has been applied to the {sup 2}H({sup 18}O,{alpha}{sup 15}N)n and {sup 2}H({sup 17}O,{alpha}{sup 14}N)n reactions to deduce the {sup 18}O(p,{alpha}){sup 15}N and {sup 17}O(p,{alpha}){sup 14}N cross sections at low energies. Resonances in the {sup 18}O(p,{alpha}){sup 15}N and {sup 17}O(p,{alpha}){sup 14}N excitation functions have been studied and the resonance parameters deduced.

  3. Leaf δ15N as a physiological indicator of the responsiveness of N2-fixing alfalfa plants to elevated [CO2], temperature and low water availability

    PubMed Central

    Ariz, Idoia; Cruz, Cristina; Neves, Tomé; Irigoyen, Juan J.; Garcia-Olaverri, Carmen; Nogués, Salvador; Aparicio-Tejo, Pedro M.; Aranjuelo, Iker

    2015-01-01

    The natural 15N/14N isotope composition (δ15N) of a tissue is a consequence of its N source and N physiological mechanisms in response to the environment. It could potentially be used as a tracer of N metabolism in plants under changing environmental conditions, where primary N metabolism may be complex, and losses and gains of N fluctuate over time. In order to test the utility of δ15N as an indicator of plant N status in N2-fixing plants grown under various environmental conditions, alfalfa (Medicago sativa L.) plants were subjected to distinct conditions of [CO2] (400 vs. 700 μmol mol−1), temperature (ambient vs. ambient +4°C) and water availability (fully watered vs. water deficiency—WD). As expected, increased [CO2] and temperature stimulated photosynthetic rates and plant growth, whereas these parameters were negatively affected by WD. The determination of δ15N in leaves, stems, roots, and nodules showed that leaves were the most representative organs of the plant response to increased [CO2] and WD. Depletion of heavier N isotopes in plants grown under higher [CO2] and WD conditions reflected decreased transpiration rates, but could also be related to a higher N demand in leaves, as suggested by the decreased leaf N and total soluble protein (TSP) contents detected at 700 μmol mol−1 [CO2] and WD conditions. In summary, leaf δ15N provides relevant information integrating parameters which condition plant responsiveness (e.g., photosynthesis, TSP, N demand, and water transpiration) to environmental conditions. PMID:26322051

  4. Leaf δ(15)N as a physiological indicator of the responsiveness of N2-fixing alfalfa plants to elevated [CO2], temperature and low water availability.

    PubMed

    Ariz, Idoia; Cruz, Cristina; Neves, Tomé; Irigoyen, Juan J; Garcia-Olaverri, Carmen; Nogués, Salvador; Aparicio-Tejo, Pedro M; Aranjuelo, Iker

    2015-01-01

    The natural (15)N/(14)N isotope composition (δ(15)N) of a tissue is a consequence of its N source and N physiological mechanisms in response to the environment. It could potentially be used as a tracer of N metabolism in plants under changing environmental conditions, where primary N metabolism may be complex, and losses and gains of N fluctuate over time. In order to test the utility of δ(15)N as an indicator of plant N status in N2-fixing plants grown under various environmental conditions, alfalfa (Medicago sativa L.) plants were subjected to distinct conditions of [CO2] (400 vs. 700 μmol mol(-1)), temperature (ambient vs. ambient +4°C) and water availability (fully watered vs. water deficiency-WD). As expected, increased [CO2] and temperature stimulated photosynthetic rates and plant growth, whereas these parameters were negatively affected by WD. The determination of δ(15)N in leaves, stems, roots, and nodules showed that leaves were the most representative organs of the plant response to increased [CO2] and WD. Depletion of heavier N isotopes in plants grown under higher [CO2] and WD conditions reflected decreased transpiration rates, but could also be related to a higher N demand in leaves, as suggested by the decreased leaf N and total soluble protein (TSP) contents detected at 700 μmol mol(-1) [CO2] and WD conditions. In summary, leaf δ(15)N provides relevant information integrating parameters which condition plant responsiveness (e.g., photosynthesis, TSP, N demand, and water transpiration) to environmental conditions. PMID:26322051

  5. Factors Controlling the Stable Nitrogen Isotopic Composition (δ15N) of Lipids in Marine Animals

    PubMed Central

    Svensson, Elisabeth; Schouten, Stefan; Hopmans, Ellen C.; Middelburg, Jack J.; Sinninghe Damsté, Jaap S.

    2016-01-01

    Lipid extraction of biomass prior to stable isotope analysis is known to cause variable changes in the stable nitrogen isotopic composition (δ15N) of residual biomass. However, the underlying factors causing these changes are not yet clear. Here we address this issue by comparing the δ15N of bulk and residual biomass of several marine animal tissues (fish, crab, cockle, oyster, and polychaete), as well as the δ15N of the extracted lipids. As observed previously, lipid extraction led to a variable offset in δ15N of biomass (differences ranging from -2.3 to +1.8 ‰). Importantly, the total lipid extract (TLE) was highly depleted in 15N compared to bulk biomass, and also highly variable (differences ranging from -14 to +0.7 ‰). The TLE consisted mainly of phosphatidylcholines, a group of lipids with one nitrogen atom in the headgroup. To elucidate the cause for the 15N-depletion in the TLE, the δ15N of amino acids was determined, including serine because it is one of the main sources of nitrogen to N-containing lipids. Serine δ15N values differed by -7 to +2 ‰ from bulk biomass δ15N, and correlated well with the 15N depletion in TLEs. On average, serine was less depleted (-3‰) than the TLE (-7 ‰), possibly due to fractionation during biosynthesis of N-containing headgroups, or that other nitrogen-containing compounds, such as urea and choline, or recycled nitrogen contribute to the nitrogen isotopic composition of the TLE. The depletion in 15N of the TLE relative to biomass increased with the trophic level of the organisms. PMID:26731720

  6. Factors Controlling the Stable Nitrogen Isotopic Composition (δ15N) of Lipids in Marine Animals.

    PubMed

    Svensson, Elisabeth; Schouten, Stefan; Hopmans, Ellen C; Middelburg, Jack J; Sinninghe Damsté, Jaap S

    2016-01-01

    Lipid extraction of biomass prior to stable isotope analysis is known to cause variable changes in the stable nitrogen isotopic composition (δ15N) of residual biomass. However, the underlying factors causing these changes are not yet clear. Here we address this issue by comparing the δ15N of bulk and residual biomass of several marine animal tissues (fish, crab, cockle, oyster, and polychaete), as well as the δ15N of the extracted lipids. As observed previously, lipid extraction led to a variable offset in δ15N of biomass (differences ranging from -2.3 to +1.8 ‰). Importantly, the total lipid extract (TLE) was highly depleted in 15N compared to bulk biomass, and also highly variable (differences ranging from -14 to +0.7 ‰). The TLE consisted mainly of phosphatidylcholines, a group of lipids with one nitrogen atom in the headgroup. To elucidate the cause for the 15N-depletion in the TLE, the δ15N of amino acids was determined, including serine because it is one of the main sources of nitrogen to N-containing lipids. Serine δ15N values differed by -7 to +2 ‰ from bulk biomass δ15N, and correlated well with the 15N depletion in TLEs. On average, serine was less depleted (-3‰) than the TLE (-7 ‰), possibly due to fractionation during biosynthesis of N-containing headgroups, or that other nitrogen-containing compounds, such as urea and choline, or recycled nitrogen contribute to the nitrogen isotopic composition of the TLE. The depletion in 15N of the TLE relative to biomass increased with the trophic level of the organisms.

  7. Factors Controlling the Stable Nitrogen Isotopic Composition (δ15N) of Lipids in Marine Animals.

    PubMed

    Svensson, Elisabeth; Schouten, Stefan; Hopmans, Ellen C; Middelburg, Jack J; Sinninghe Damsté, Jaap S

    2016-01-01

    Lipid extraction of biomass prior to stable isotope analysis is known to cause variable changes in the stable nitrogen isotopic composition (δ15N) of residual biomass. However, the underlying factors causing these changes are not yet clear. Here we address this issue by comparing the δ15N of bulk and residual biomass of several marine animal tissues (fish, crab, cockle, oyster, and polychaete), as well as the δ15N of the extracted lipids. As observed previously, lipid extraction led to a variable offset in δ15N of biomass (differences ranging from -2.3 to +1.8 ‰). Importantly, the total lipid extract (TLE) was highly depleted in 15N compared to bulk biomass, and also highly variable (differences ranging from -14 to +0.7 ‰). The TLE consisted mainly of phosphatidylcholines, a group of lipids with one nitrogen atom in the headgroup. To elucidate the cause for the 15N-depletion in the TLE, the δ15N of amino acids was determined, including serine because it is one of the main sources of nitrogen to N-containing lipids. Serine δ15N values differed by -7 to +2 ‰ from bulk biomass δ15N, and correlated well with the 15N depletion in TLEs. On average, serine was less depleted (-3‰) than the TLE (-7 ‰), possibly due to fractionation during biosynthesis of N-containing headgroups, or that other nitrogen-containing compounds, such as urea and choline, or recycled nitrogen contribute to the nitrogen isotopic composition of the TLE. The depletion in 15N of the TLE relative to biomass increased with the trophic level of the organisms. PMID:26731720

  8. Use of geochemical and isotope tracers to assess groundwater dependency of a terrestrial ecosystem: case study from southern Poland

    NASA Astrophysics Data System (ADS)

    Zurek, Anna J.; Witczak, Stanislaw; Kania, Jaroslaw; Rozanski, Kazimierz; Dulinski, Marek; Wachniew, Przemyslaw

    2015-04-01

    The presented study was aimed at better understanding of the functioning of groundwater dependent terrestrial ecosystem (GDTE) located in the south of Poland. The studied GDTE consists of a valuable forest stand (Niepolomice Forest) and associated wetland (Wielkie Bloto fen). It relies not only on shallow, unconfined aquifer but indirectly also on groundwater originating from the deeper confined aquifer, underlying the Quaternary cover and separated from it by an aquitard of variable thickness. The main objective of the study was to evaluate the contribution of groundwater to the water balance of the studied GDTE and thereby assess the potential risk to this system associated with intense exploitation of the deeper aquifer. The Wielkie Błoto fen area and the adjacent parts of Niepolomice Forest are drained by the Dluga Woda stream with 8.2 km2 of gauged catchment area. Hydrometric measurements, carried out on the Dluga Woda stream over two-year period (August 2011 - August 2013) were supplemented by chemical and isotope analyses of stream water, monitored on monthly basis. Physico-chemical parameters of the stream water (SEC, pH, Na content, Na/Cl molar ratio) and isotope tracers (deuterium, oxygen-18 and tritium) were used to quantify the expected contribution of groundwater seepage from the deeper aquifer to the water balance of the Dluga Woda catchment. The mean transit time of water through the catchment, derived from temporal variations of δ18O and tritium content in the Dluga Woda stream, was in the order of three months. This fast component of the total discharge of Dluga Woda stream is associated surface runoff and groundwater flow paths through the Quaternary cover. The slow component devoid of tritium and probably originated from the deeper Neogene aquifer is equal to approximately 30% of the total discharge. The relationships between the physico-chemical parameters of the stream water and the flow rate of Dluga Woda clearly indicate that the monitored

  9. Proton-decoupled CPMG: a better experiment for measuring (15)N R2 relaxation in disordered proteins.

    PubMed

    Yuwen, Tairan; Skrynnikov, Nikolai R

    2014-04-01

    (15)N R2 relaxation is one of the most informative experiments for characterization of intrinsically disordered proteins (IDPs). Small changes in nitrogen R2 rates are often used to determine how IDPs respond to various biologically relevant perturbations such as point mutations, posttranslational modifications and weak ligand interactions. However collecting high-quality (15)N relaxation data can be difficult. Of necessity, the samples of IDPs are often prepared with low protein concentration and the measurement time can be limited because of rapid sample degradation. Furthermore, due to hardware limitations standard experiments such as (15)N spin-lock and CPMG can sample the relaxation decay only to ca. 150ms. This is much shorter than (15)N T2 times in disordered proteins at or near physiological temperature. As a result, the sampling of relaxation decay profiles in these experiments is suboptimal, which further lowers the precision of the measurements. Here we report a new implementation of the proton-decoupled (PD) CPMG experiment which allows one to sample (15)N R2 relaxation decay up to ca. 0.5-1s. The new experiment has been validated through comparison with the well-established spin-lock measurement. Using dilute samples of denatured ubiquitin, we have demonstrated that PD-CPMG produces up to 3-fold improvement in the precision of the data. It is expected that for intrinsically disordered proteins the gains may be even more substantial. We have also shown that this sequence has a number of favorable properties: (i) the spectra are recorded with narrow linewidth in nitrogen dimension; (ii) (15)N offset correction is small and easy to calculate; (iii) the experiment is immune to various spurious effects arising from solvent exchange; (iv) the results are stable with respect to pulse miscalibration and rf field inhomogeneity; (v) with minimal change, the pulse sequence can also be used to measure R2 relaxation of (15)N(ε) spins in arginine side chains. We

  10. Asian Tracer Experiment and Atmospheric Modeling (TEAM) Project: Draft Field Work Plan for the Asian Long-Range Tracer Experiment

    SciTech Connect

    Allwine, K Jerry; Flaherty, Julia E.

    2007-08-01

    This report provides an experimental plan for a proposed Asian long-range tracer study as part of the international Tracer Experiment and Atmospheric Modeling (TEAM) Project. The TEAM partners are China, Japan, South Korea and the United States. Optimal times of year to conduct the study, meteorological measurements needed, proposed tracer release locations, proposed tracer sampling locations and the proposed durations of tracer releases and subsequent sampling are given. Also given are the activities necessary to prepare for the study and the schedule for completing the preparation activities leading to conducting the actual field operations. This report is intended to provide the TEAM members with the information necessary for planning and conducting the Asian long-range tracer study. The experimental plan is proposed, at this time, to describe the efforts necessary to conduct the Asian long-range tracer study, and the plan will undoubtedly be revised and refined as the planning goes forward over the next year.

  11. Evaluation of leakage from fume hoods using tracer gas, tracer nanoparticles and nanopowder handling test methodologies.

    PubMed

    Dunn, Kevin H; Tsai, Candace Su-Jung; Woskie, Susan R; Bennett, James S; Garcia, Alberto; Ellenbecker, Michael J

    2014-01-01

    The most commonly reported control used to minimize workplace exposures to nanomaterials is the chemical fume hood. Studies have shown, however, that significant releases of nanoparticles can occur when materials are handled inside fume hoods. This study evaluated the performance of a new commercially available nano fume hood using three different test protocols. Tracer gas, tracer nanoparticle, and nanopowder handling protocols were used to evaluate the hood. A static test procedure using tracer gas (sulfur hexafluoride) and nanoparticles as well as an active test using an operator handling nanoalumina were conducted. A commercially available particle generator was used to produce sodium chloride tracer nanoparticles. Containment effectiveness was evaluated by sampling both in the breathing zone (BZ) of a mannequin and operator as well as across the hood opening. These containment tests were conducted across a range of hood face velocities (60, 80, and 100 ft/min) and with the room ventilation system turned off and on. For the tracer gas and tracer nanoparticle tests, leakage was much more prominent on the left side of the hood (closest to the room supply air diffuser) although some leakage was noted on the right side and in the BZ sample locations. During the tracer gas and tracer nanoparticle tests, leakage was primarily noted when the room air conditioner was on for both the low and medium hood exhaust airflows. When the room air conditioner was turned off, the static tracer gas tests showed good containment across most test conditions. The tracer gas and nanoparticle test results were well correlated showing hood leakage under the same conditions and at the same sample locations. The impact of a room air conditioner was demonstrated with containment being adversely impacted during the use of room air ventilation. The tracer nanoparticle approach is a simple method requiring minimal setup and instrumentation. However, the method requires the reduction in

  12. Evaluation of leakage from fume hoods using tracer gas, tracer nanoparticles and nanopowder handling test methodologies.

    PubMed

    Dunn, Kevin H; Tsai, Candace Su-Jung; Woskie, Susan R; Bennett, James S; Garcia, Alberto; Ellenbecker, Michael J

    2014-01-01

    The most commonly reported control used to minimize workplace exposures to nanomaterials is the chemical fume hood. Studies have shown, however, that significant releases of nanoparticles can occur when materials are handled inside fume hoods. This study evaluated the performance of a new commercially available nano fume hood using three different test protocols. Tracer gas, tracer nanoparticle, and nanopowder handling protocols were used to evaluate the hood. A static test procedure using tracer gas (sulfur hexafluoride) and nanoparticles as well as an active test using an operator handling nanoalumina were conducted. A commercially available particle generator was used to produce sodium chloride tracer nanoparticles. Containment effectiveness was evaluated by sampling both in the breathing zone (BZ) of a mannequin and operator as well as across the hood opening. These containment tests were conducted across a range of hood face velocities (60, 80, and 100 ft/min) and with the room ventilation system turned off and on. For the tracer gas and tracer nanoparticle tests, leakage was much more prominent on the left side of the hood (closest to the room supply air diffuser) although some leakage was noted on the right side and in the BZ sample locations. During the tracer gas and tracer nanoparticle tests, leakage was primarily noted when the room air conditioner was on for both the low and medium hood exhaust airflows. When the room air conditioner was turned off, the static tracer gas tests showed good containment across most test conditions. The tracer gas and nanoparticle test results were well correlated showing hood leakage under the same conditions and at the same sample locations. The impact of a room air conditioner was demonstrated with containment being adversely impacted during the use of room air ventilation. The tracer nanoparticle approach is a simple method requiring minimal setup and instrumentation. However, the method requires the reduction in

  13. EVALUATION OF LEAKAGE FROM FUME HOODS USING TRACER GAS, TRACER NANOPARTICLES AND NANOPOWDER HANDLING TEST METHODOLOGIES

    PubMed Central

    Dunn, Kevin H.; Tsai, Candace Su-Jung; Woskie, Susan R.; Bennett, James S.; Garcia, Alberto; Ellenbecker, Michael J.

    2015-01-01

    The most commonly reported control used to minimize workplace exposures to nanomaterials is the chemical fume hood. Studies have shown, however, that significant releases of nanoparticles can occur when materials are handled inside fume hoods. This study evaluated the performance of a new commercially available nano fume hood using three different test protocols. Tracer gas, tracer nanoparticle, and nanopowder handling protocols were used to evaluate the hood. A static test procedure using tracer gas (sulfur hexafluoride) and nanoparticles as well as an active test using an operator handling nanoalumina were conducted. A commercially available particle generator was used to produce sodium chloride tracer nanoparticles. Containment effectiveness was evaluated by sampling both in the breathing zone (BZ) of a mannequin and operator as well as across the hood opening. These containment tests were conducted across a range of hood face velocities (60, 80, and 100 feet/minute) and with the room ventilation system turned off and on. For the tracer gas and tracer nanoparticle tests, leakage was much more prominent on the left side of the hood (closest to the room supply air diffuser) although some leakage was noted on the right side and in the BZ sample locations. During the tracer gas and tracer nanoparticle tests, leakage was primarily noted when the room air conditioner was on for both the low and medium hood exhaust air flows. When the room air conditioner was turned off, the static tracer gas tests showed good containment across most test conditions. The tracer gas and nanoparticle test results were well correlated showing hood leakage under the same conditions and at the same sample locations. The impact of a room air conditioner was demonstrated with containment being adversely impacted during the use of room air ventilation. The tracer nanoparticle approach is a simple method requiring minimal setup and instrumentation. However, the method requires the reduction in

  14. Selection of Actinide Chemical Analogues for WIPP Tests: Potential Nonradioactive Sorbing and Nonsorbing Tracers for Study of Ion Transport in the Environment

    SciTech Connect

    Dale Spall; Robert Villarreal

    1998-08-01

    Chemical characteristics of the actinides (Th, U, Np, Pu, Am) have been studied relative to nonradioactive chemical elements that have similar characteristics in an attempt to identify a group of actinide chemical analogues that are nonradioactive. In general, the chemistries of the actinides, especially U, Np, Pu, and Am, are very complex and attempts to identify a single chemical analogue for each oxidation state were not successful. However, the rationale for selecting a group of chemical analogues that would mimic the actinides as a group is provided. The categorization of possible chemical analogues (tracers) with similar chemical properties was based on the following criteria. Categorization was studied according.

  15. Single-well tracer test sensitivity w. r. to hydrofrac and matrix parameters (case study for the Horstberg site in the N-German Sedimentary Basin)

    NASA Astrophysics Data System (ADS)

    Ghergut, I.; Behrens, H.; Holzbecher, E.; Jung, R.; Sauter, M.; Tischner, T.

    2012-04-01

    are, as well, sensitive w. r. to X, but the effects of increasing X, upon tracer signals, are largely indistinguishable from those of increasing Solling porosity. Further numerical simulations of heat and solute tracer transport in above-named test settings reveal significant disparities between parameter sensitivities attainable in the same kind of test (A, B) conducted at different layers, as well as between solute concentration and temperature signal sensitivities w. r. to transport parameters in one and the same test (C). Why? - Test A features fracture flow, and dual-continuum transport, whereas test B features single-continuum flow and transport (within the host rock, with negligible losses to the hydrofrac). Flow is rapid in test A (being fracture-dominated), but slow in test B (being confined to the host rock). In test C, fluid first flows through the hydrofrac mainly, next it 'must' flow through the upper sandstone; heat transport is dominated by matrix diffusion across the hydrofrac (along which it thus experiences strong retardation), whereas solute transport is dominated by matrix micro-fissure and intra-particle diffusion within the upper sandstone (where it experiences strong retardation). We examine the implications of these findings upon the inversion of transport-effective hydrofrac parameters from measured tracer signals, and upon the tracer-based predictability of the system's thermal lifetime under different operation schemes. [1]http://www.geothermal-energy.org/pdf/IGAstandard/SGW/2005/jung.pdf [2]http://www.geothermal-energy.org/pdf/IGAstandard/WGC/2010/2272.pdf Acknowledgement: This study is funded by MWK Niedersachsen (Lower-Saxony's Science and Culture Ministry) and by Baker Hughes (Celle) within task units 'G6' and 'G7' of the Collaborative Research Project 'gebo' (Geothermal Energy and High-Performance Drilling).

  16. Experimental study of the effect of test-well arrangement for partitioning interwell tracer test on the estimation of NAPL saturation

    NASA Astrophysics Data System (ADS)

    Kim, B.; Kim, Y.; Yeo, I.; Yongcheol Kim, In Wook Yeo

    2011-12-01

    Partitioning interwell tracer test (PITT) is a method to quantify and qualify a contaminated site with NAPLs through a degree of retardation of partitioning tracers compared to a conservative one. Although PITT is known to be a more effective method to measure the saturation of spatially-distributed NAPL contaminant than the point investigation method, the saturation estimation from PITT is reported to be underestimated due to various factors including heterogeneity of the media, adsorption, source zone NAPL architecture, and long tailing in breakthrough curves of partitioning tracers. Analytical description of PITT assumes that the injection-pumping well pair is on the line of ambient groundwater flow direction, but the test-well pair could easily be off the line in the field site, which could be another erroneous factor in analyzing PITT data. The purpose of this work is to study the influence of the angle of the test-well pair to ambient groundwater flow direction based on the result from PITT. The experiments were conducted in a small-scale 3D sandbox with dimensions of 0.5 m × 0.4 m × 0.15 m (LWH) of stainless steel. The surface is covered and sealed with a plexiglass plate to make the physical model a confined aquifer. Eight full-screened wells of Teflon material were installed along the perimeter of a 50 mm circle with 45 degree intervals in the middle of the physical model. Both ends of the sand box are connected to constant head reservoirs. The physical model was wet-packed with sieved and washed sand. Trichloroethylene (TCE) and bromide were used as the contaminant and the conservative tracer, respectively. Hexanol, 2,4-dimethyl-3-pentanol and 6-methyl-2-heptanol were used as partitioning tracers. Before the injection of TCE, a PITT was conducted to measure adsorption coefficient of partitioning tracers to the sand material. TCE of 4.5 mL, dyed with Sudan IV, was injected into the inner part of the circle of the wells. PITTs using the test-well pair

  17. Identification of the magnesium-histidine stretching vibration of the bacteriochlorophyll cofactors in photosynthetic reaction centers via {sup 15}N-labeling of the histidines

    SciTech Connect

    Czarnecki, K.; Bocian, D.F.; Chynwat, V.; Erickson, J.P.; Frank, H.A.

    1997-03-12

    In this communication, we report low-frequency, near-infrared-exciation RR spectra of bacterial RCs in which the histidine residues of the protein are selectively labeled with {sup 15}N. For practical reasons, the studies were conducted by comparing the vibrational signatures of RCs in which {sup 15}N was universally incorporated (all cofactors and all protein residues) (designated all-{sup 15}N RCs) with those in which [{sup 14}N]histidine was introduced as a reverse label (disignated {sup 14}N-His RCs) into the all {sup 15}N-labeled RCs. The studies of the histidine-labeled RCs reveal that the vibrational characteristics of the BChl core are far more complicated than originally anticipated. These results have clear implications for the photoexcitation dynamics of the BChls in RCs and may also have significant consequences for the dynamics of exogenous ligand binding to heme-based oxygen carriers. 12 refs., 2 figs.

  18. Disturbance and topography shape nitrogen availability and δ15N over long-term forest succession

    EPA Science Inventory

    Forest disturbance and long-term succession can promote open N cycling that increases N loss and soil δ15N values. We examined soil and foliar patterns in N and δ15N, and soil N mineralization, across a topographically complex montane forest landscape influenced by human logging ...