Science.gov

Sample records for 2d contour plots

  1. Algorithm for Constructing Contour Plots

    NASA Technical Reports Server (NTRS)

    Johnson, W.; Silva, F.

    1984-01-01

    General computer algorithm developed for construction of contour plots. algorithm accepts as input data values at set of points irregularly distributed over plane. Algorithm based on interpolation scheme: points in plane connected by straight-line segments to form set of triangles. Program written in FORTRAN IV.

  2. Portable FORTRAN contour-plotting subprogram

    SciTech Connect

    Haskell, K.H.

    1983-07-01

    In this report we discuss a contour plotting Fortran subprogram. While contour plotting subroutines are available in many commercial plotting packages, this routine has the following advantages: (1) since it uses the Weasel and VDI plot routines developed at Sandia, it occupies little storage and can be used on most of the Sandia time-sharing systems as part of a larger program. In the past, the size of plotting packages often forced a user to perform plotting operations in a completely separate program; (2) the contour computation algorithm is efficient and robust, and computes accurate contours for sets of data with low resolution; and (3) the subprogram is easy to use. A simple contour plot can be produced with a minimum of information provided by a user in one Fortran subroutine call. Through the use of a wide variety of subroutine options, many additional features can be used. These include such items as plot titles, grid lines, placement of text on the page, etc. The subroutine is written in portable Fortran 77, and is designed to run on any system which supports the Weasel and VDI plot packages. It also uses routines from the SLATEC mathematical subroutine library.

  3. Characterization of Muscat wines aroma evolution using comprehensive gas chromatography followed by a post-analytic approach to 2D contour plots comparison.

    PubMed

    Bordiga, Matteo; Rinaldi, Maurizio; Locatelli, Monica; Piana, Gianluca; Travaglia, Fabiano; Coïsson, Jean Daniel; Arlorio, Marco

    2013-09-01

    This study presents the application of a headspace solid-phase microextraction (HS-SPME) method on the analysis of Muscat-based wines volatiles by comprehensive two-dimensional gas chromatography (GC×GC) and Time-Of-Flight mass spectrometry (TOF-MS). The aroma patterns were established for different samples of Asti Spumante and Moscato d'Asti wines, stored in bottles for 6 months at different temperatures. Wines stored at 5 °C for 6 months did not show significant changes in flavor; otherwise, the samples stored at 15 and 25 °C, showed a significant decrease in linalool, β-damascenone, ethyl hexanoate, and ethyl octanoate levels. In these last samples, α-terpineol, hotrienol, nerol oxide, furanic linalool oxides A/B and rose oxide concentrations significantly increased. A mathematical approach was developed and applied to raw data exported after the chromatographic course, in order (i) to normalise different 2D chromatograms, permitting their direct comparison and (ii) to automatically identify and calculate from pixel-to-pixel re-designed 2D chromatograms any differences among key volatile compounds. PMID:23578615

  4. Measuring and Plotting Surface-Contour Deviations

    NASA Technical Reports Server (NTRS)

    Aragon, Lino A.; Shuck, Thomas; Crockett, Leroy K.

    1987-01-01

    Hand-held device measures deviation of contour of surface from desired contour and provides output to x-y plotter. Carriage on device rolled along track representing desired contour, while spring-loaded stylus on device deflects perpendicularly to track to follow surface. Operator moves carriage of contour-measuring device on beamlike track. Stylus on carriage traces contour of surface above it. Carriage of measuring device holds transducer measuring cross-track displacement of surface from desired contour, and multiple-turn potentiometer measuring position along track.

  5. Oblique orthographic projections and contour plots

    NASA Technical Reports Server (NTRS)

    Giles, G. L.

    1977-01-01

    Oblique orthographic projections allow model to be viewed in any selected orientation specified by Euler-angle transformation. This transformation resolves coordinate system of model to principal plane on which display is to be plotted.

  6. An Unusual Application of NASTRAN Contour Plotting Capability

    NASA Technical Reports Server (NTRS)

    Mittal, S.; Gallo, M.; Wang, T.

    1985-01-01

    A procedure is presented for obtaining contour plots of any physical quantity defined on a number of points of the surface of a structure. Rigid Format 1 of HEAT approach in Cosmic NASTRAN is ALTERED to enable use of contour plotting capability for scalar quantities. The ALTERED DMAP sequence is given. Examples include temperature distribution on the face of a cooled laser mirror and the angle of incidence or a radome surface.

  7. WCPP-THE WOLF PLOTTING AND CONTOURING PACKAGE

    NASA Technical Reports Server (NTRS)

    Masaki, G. T.

    1994-01-01

    The WOLF Contouring and Plotting Package provides the user with a complete general purpose plotting and contouring capability. This package is a complete system for producing line printer, SC4020, Gerber, Calcomp, and SD4060 plots. The package has been designed to be highly flexible and easy to use. Any plot from a quick simple plot (which requires only one call to the package) to highly sophisticated plots (including motion picture plots) can be easily generated with only a basic knowledge of FORTRAN and the plot commands. Anyone designing a software system that requires plotted output will find that this package offers many advantages over the standard hardware support packages available. The WCPP package is divided into a plot segment and a contour segment. The plot segment can produce output for any combination of line printer, SC4020, Gerber, Calcomp, and SD4060 plots. The line printer plots allow the user to have plots available immediately after a job is run at a low cost. Although the resolution of line printer plots is low, the quick results allows the user to judge if a high resolution plot of a particular run is desirable. The SC4020 and SD4060 provide high speed high resolution cathode ray plots with film and hard copy output available. The Gerber and Calcomp plotters provide very high quality (of publishable quality) plots of good resolution. Being bed or drum type plotters, the Gerber and Calcomp plotters are usually slow and not suited for large volume plotting. All output for any or all of the plotters can be produced simultaneously. The types of plots supported are: linear, semi-log, log-log, polar, tabular data using the FORTRAN WRITE statement, 3-D perspective linear, and affine transformations. The labeling facility provides for horizontal labels, vertical labels, diagonal labels, vector characters of a requested size (special character fonts are easily implemented), and rotated letters. The gridding routines label the grid lines according to

  8. A GENERAL ALGORITHM FOR THE CONSTRUCTION OF CONTOUR PLOTS

    NASA Technical Reports Server (NTRS)

    Johnson, W.

    1994-01-01

    The graphical presentation of experimentally or theoretically generated data sets frequently involves the construction of contour plots. A general computer algorithm has been developed for the construction of contour plots. The algorithm provides for efficient and accurate contouring with a modular approach which allows flexibility in modifying the algorithm for special applications. The algorithm accepts as input data values at a set of points irregularly distributed over a plane. The algorithm is based on an interpolation scheme in which the points in the plane are connected by straight line segments to form a set of triangles. In general, the data is smoothed using a least-squares-error fit of the data to a bivariate polynomial. To construct the contours, interpolation along the edges of the triangles is performed, using the bivariable polynomial if data smoothing was performed. Once the contour points have been located, the contour may be drawn. This program is written in FORTRAN IV for batch execution and has been implemented on an IBM 360 series computer with a central memory requirement of approximately 100K of 8-bit bytes. This computer algorithm was developed in 1981.

  9. VECTUM. Irregular 2D Velocity Vector Field Plotting Package

    SciTech Connect

    McClurg, F.R.; Mousseau, V.A.

    1992-05-04

    VECTUM is a NCAR Graphics based package, for generating a plot of an irregular 2D velocity vector field. The program reads an ASCII database of x, y, u, v, data pairs and produces a plot in Computer Graphics Metafile (CGM) format. The program also uses an ASCII parameter file for controlling annotation details such as the plot title, arrowhead style, scale of vectors, windowing, etc. Simple geometry (i.e. lines, arcs, splines) can be defined to be included with the velocity vectors. NCAR Graphics drivers can be used to display the CGM file into PostScript, HPGL, HDF, etc, output.

  10. THE CONTOUR METHOD: SIMPLE 2-D MAPPING OF RESIDUAL STRESSES

    SciTech Connect

    M. PRIME; A. GONZALES

    2000-06-01

    We present an entirely new method for measuring residual stress that is extremely simple to apply yet more powerful than existing techniques. In this method, a part is carefully cut in two. The contour of the resulting new surface is measured to determine the displacements normal to the surface caused by the release of the residual stresses. Analytically, the opposite of these measured displacements are applied as boundary conditions to the surface in a finite element model. By Bueckner's superposition principle, this gives the original residual stresses normal to the plane of the cut. Unlike other relaxation methods for measuring residual stress, the measured data can be used to solve directly for the stresses without a tedious inversion technique. At the same time, an arbitrary two-dimensional variation in stresses can be determined. We demonstrate the method on a steel specimen with a known residual stress profile.

  11. A general algorithm for the construction of contour plots

    NASA Technical Reports Server (NTRS)

    Johnson, W.; Silva, F.

    1981-01-01

    An algorithm is described that performs the task of drawing equal level contours on a plane, which requires interpolation in two dimensions based on data prescribed at points distributed irregularly over the plane. The approach is described in detail. The computer program that implements the algorithm is documented and listed.

  12. Using contour plots in elecgroproduction to examine regions in {epsilon}, Q{sup 2}, W space

    SciTech Connect

    Funsten, H.

    1994-04-01

    In determining incident CEBAF beam energies for CLAS electroproduction experiments that separate the longitudinal and transverse cross section components, contour plots of {epsilon} defined over a 2 dimensional Q{sup 2}, W space can be useful. This note describes an approximate method of constructing such plots.

  13. Flyby Error Analysis Based on Contour Plots for the Cassini Tour

    NASA Technical Reports Server (NTRS)

    Stumpf, P. W.; Gist, E. M.; Goodson, T. D.; Hahn, Y.; Wagner, S. V.; Williams, P. N.

    2008-01-01

    The maneuver cancellation analysis consists of cost contour plots employed by the Cassini maneuver team. The plots are two-dimensional linear representations of a larger six-dimensional solution to a multi-maneuver, multi-encounter mission at Saturn. By using contours plotted with the dot product of vectors B and R and the dot product of vectors B and T components, it is possible to view the effects delta V on for various encounter positions in the B-plane. The plot is used in operations to help determine if the Approach Maneuver (ensuing encounter minus three days) and/or the Cleanup Maneuver (ensuing encounter plus three days) can be cancelled and also is a linear check of an integrated solution.

  14. Visualizing Europe’s demographic scars with coplots and contour plots

    PubMed Central

    Minton, Jonathan; Vanderbloemen, Laura; Dorling, Danny

    2013-01-01

    We present two enhancements to existing methods for visualizing vital statistics data. Data from the Human Mortality Database were used and vital statistics from England and Wales are used for illustration. The simpler of these methods involves coplotting mean age of death with its variance, and the more complex of these methods is to present data as a contour plot. The coplot method shows the effect of the 20th century’s epidemiological transitions. The contour plot method allows more complex and subtle age, period and cohort effects to be seen. The contour plot shows the effects of broad improvements in public health over the 20th century, including vast reductions in rates of childhood mortality, reduced baseline mortality risks during adulthood and the postponement of higher mortality risks to older ages. They also show the effects of the two world wars and the 1918 influenza pandemic on men of fighting age, women and children. The contour plots also show a cohort effect for people born around 1918, suggesting a possible epigenetic effect of parental exposure to the pandemic which shortened the cohort’s lifespan and which has so far received little attention. Although this article focuses on data from England and Wales, the associated online appendices contain equivalent visualizations for almost 50 series of data available on the Human Mortality Database. We expect that further analyses of these visualizations will reveal further insights into global public health. PMID:24062300

  15. Creation and evaluation of a two-dimensional contour plot of fatty acid methyl esters after off-line coupling of reversed-phase HPLC and GC/EI-MS.

    PubMed

    Hauff, Simone; Vetter, Walter

    2010-04-01

    Fatty acid methyl esters obtained from a fish oil sample were fractionated by non-aqueous reversed-phase high-performance liquid chromatography (RP-HPLC) using three serially connected C(18)-columns and pure methanol as the eluent. The HPLC fractions were analyzed by gas chromatography-electron ionization mass spectrometry in the selected ion monitoring mode. Data analysis and visualization was performed by the creation of a two-dimensional (2D) contour plot, in which GC retention times were plotted against the HPLC fractions. The 2D contour plot resulted in a full resolution of more than 120 fatty acids. The fatty acids were arranged on predictable lines and curves in dependence of the number of carbons and double bonds. The 2D contour plot enabled both the recognition of unknown fatty acids (which were found off the lines and curves) and the prediction of the coordinates of known fatty acids. Finally, selected HPLC fractions were subjected to further experiments (hydrogenation, silver ion fractionation, specific GC/MS measurements) in order to verify the structural assignments predicted from the 2D contour plot. All in all, the structures of over 100 FAs could be assigned to the peaks detected in the 2D contour plots. PMID:20155411

  16. Algorithms for Accurate and Fast Plotting of Contour Surfaces in 3D Using Hexahedral Elements

    NASA Astrophysics Data System (ADS)

    Singh, Chandan; Saini, Jaswinder Singh

    2016-07-01

    In the present study, Fast and accurate algorithms for the generation of contour surfaces in 3D are described using hexahedral elements which are popular in finite element analysis. The contour surfaces are described in the form of groups of boundaries of contour segments and their interior points are derived using the contour equation. The locations of contour boundaries and the interior points on contour surfaces are as accurate as the interpolation results obtained by hexahedral elements and thus there are no discrepancies between the analysis and visualization results.

  17. Algorithms for Accurate and Fast Plotting of Contour Surfaces in 3D Using Hexahedral Elements

    NASA Astrophysics Data System (ADS)

    Singh, Chandan; Saini, Jaswinder Singh

    2016-05-01

    In the present study, Fast and accurate algorithms for the generation of contour surfaces in 3D are described using hexahedral elements which are popular in finite element analysis. The contour surfaces are described in the form of groups of boundaries of contour segments and their interior points are derived using the contour equation. The locations of contour boundaries and the interior points on contour surfaces are as accurate as the interpolation results obtained by hexahedral elements and thus there are no discrepancies between the analysis and visualization results.

  18. HP-9825A calculator programs for plotting orbiter RCS jet dynamic pressure contours

    NASA Technical Reports Server (NTRS)

    Wilson, S. W.

    1977-01-01

    Computer programs which generate displays of the dynamic pressure fields generated by orbiter RCS thruster firings are described. The programs can be used to generate dynamic contours for an isolated RCS jet and to superimpose the plume contours for specific jets or jet clusters on front and side views of the orbiter profile.

  19. E2GPR - Edit your geometry, Execute GprMax2D and Plot the Results!

    NASA Astrophysics Data System (ADS)

    Pirrone, Daniele; Pajewski, Lara

    2015-04-01

    can be employed to import synthetic data created by GprMax using the binary-format option into MATLAB, in order to be processed and/or visualized. Further MATLAB procedures for the visualization of GprMax synthetic data have been developed within the COST Action TU1208 [2] and are available for free public download on www.GPRadar.eu. The current version of GprMax3D is compiled with OpenMP, supporting multi-platform shared memory multiprocessing which allows GprMax3D to take advantage of multiple cores/CPUs. GprMax2D, instead, exploits a single core when executed. E2GPR is a new software tool, available free of charge for both academic and commercial use, conceived to: 1) assist in the creation, modification and analysis of GprMax2D models, through a Computer-Aided Design (CAD) system; 2) allow parallel and/or distributed computing with GprMax2D, on a network of computers; 3) automatically plot A-scans and B-scans generated by GprMax2D. The CAD and plotter parts of the tool are implemented in Java and can run on any Java Virtual Machine (JVM) regardless of computer architecture. The part of the tool devoted to supporting parallel and/or distributed computing, instead, requires the set up of a Web-Service (on a server emulator or server); in fact, it is currently configured only for Windows Server and Internet Information Services (IIS). In this work, E2GPR is presented and examples are provided which demonstrate its use. The tool can be currently obtained by contacting the authors. It will soon be possible to download it from www.GPRadar.eu. Acknowledgement This work is a contribution to the COST Action TU1208 'Civil Engineering Applications of Ground Penetrating Radar.' The authors thank COST for funding the Action TU1208. References [1] A. Giannopoulos, 'Modelling ground penetrating radar by GprMax,' Construction and Building Materials, vol. 19, pp. 755-762, 2005. [2] L. Pajewski, A. Benedetto, X. Dérobert, A. Giannopoulos, A. Loizos, G. Manacorda, M. Marciniak, C

  20. E2GPR - Edit your geometry, Execute GprMax2D and Plot the Results!

    NASA Astrophysics Data System (ADS)

    Pirrone, Daniele; Pajewski, Lara

    2015-04-01

    can be employed to import synthetic data created by GprMax using the binary-format option into MATLAB, in order to be processed and/or visualized. Further MATLAB procedures for the visualization of GprMax synthetic data have been developed within the COST Action TU1208 [2] and are available for free public download on www.GPRadar.eu. The current version of GprMax3D is compiled with OpenMP, supporting multi-platform shared memory multiprocessing which allows GprMax3D to take advantage of multiple cores/CPUs. GprMax2D, instead, exploits a single core when executed. E2GPR is a new software tool, available free of charge for both academic and commercial use, conceived to: 1) assist in the creation, modification and analysis of GprMax2D models, through a Computer-Aided Design (CAD) system; 2) allow parallel and/or distributed computing with GprMax2D, on a network of computers; 3) automatically plot A-scans and B-scans generated by GprMax2D. The CAD and plotter parts of the tool are implemented in Java and can run on any Java Virtual Machine (JVM) regardless of computer architecture. The part of the tool devoted to supporting parallel and/or distributed computing, instead, requires the set up of a Web-Service (on a server emulator or server); in fact, it is currently configured only for Windows Server and Internet Information Services (IIS). In this work, E2GPR is presented and examples are provided which demonstrate its use. The tool can be currently obtained by contacting the authors. It will soon be possible to download it from www.GPRadar.eu. Acknowledgement This work is a contribution to the COST Action TU1208 'Civil Engineering Applications of Ground Penetrating Radar.' The authors thank COST for funding the Action TU1208. References [1] A. Giannopoulos, 'Modelling ground penetrating radar by GprMax,' Construction and Building Materials, vol. 19, pp. 755-762, 2005. [2] L. Pajewski, A. Benedetto, X. Dérobert, A. Giannopoulos, A. Loizos, G. Manacorda, M. Marciniak, C

  1. Soft-tissues Image Processing: Comparison of Traditional Segmentation Methods with 2D active Contour Methods

    NASA Astrophysics Data System (ADS)

    Mikulka, J.; Gescheidtova, E.; Bartusek, K.

    2012-01-01

    The paper deals with modern methods of image processing, especially image segmentation, classification and evaluation of parameters. It focuses primarily on processing medical images of soft tissues obtained by magnetic resonance tomography (MR). It is easy to describe edges of the sought objects using segmented images. The edges found can be useful for further processing of monitored object such as calculating the perimeter, surface and volume evaluation or even three-dimensional shape reconstruction. The proposed solutions can be used for the classification of healthy/unhealthy tissues in MR or other imaging. Application examples of the proposed segmentation methods are shown. Research in the area of image segmentation focuses on methods based on solving partial differential equations. This is a modern method for image processing, often called the active contour method. It is of great advantage in the segmentation of real images degraded by noise with fuzzy edges and transitions between objects. In the paper, results of the segmentation of medical images by the active contour method are compared with results of the segmentation by other existing methods. Experimental applications which demonstrate the very good properties of the active contour method are given.

  2. Geometric Neural Computing for 2D Contour and 3D Surface Reconstruction

    NASA Astrophysics Data System (ADS)

    Rivera-Rovelo, Jorge; Bayro-Corrochano, Eduardo; Dillmann, Ruediger

    In this work we present an algorithm to approximate the surface of 2D or 3D objects combining concepts from geometric algebra and artificial neural networks. Our approach is based on the self-organized neural network called Growing Neural Gas (GNG), incorporating versors of the geometric algebra in its neural units; such versors are the transformations that will be determined during the training stage and then applied to a point to approximate the surface of the object. We also incorporate the information given by the generalized gradient vector flow to select automatically the input patterns, and also in the learning stage in order to improve the performance of the net. Several examples using medical images are presented, as well as images of automatic visual inspection. We compared the results obtained using snakes against the GSOM incorporating the gradient information and using versors. Such results confirm that our approach is very promising. As a second application, a kind of morphing or registration procedure is shown; namely the algorithm can be used when transforming one model at time t 1 into another at time t 2. We include also examples applying the same procedure, now extended to models based on spheres.

  3. Computer programs for plotting spot-beam coverages from an earth synchronous satellite and earth-station antenna elevation angle contours

    NASA Technical Reports Server (NTRS)

    Stagl, T. W.; Singh, J. P.

    1972-01-01

    A description and listings of computer programs for plotting geographical and political features of the world or a specified portion of it, for plotting spot-beam coverages from an earth-synchronous satellite over the computer generated mass, and for plotting polar perspective views of the earth and earth-station antenna elevation contours for a given satellite location are presented. The programs have been prepared in connection with a project on Application of Communication Satellites to Educational Development.

  4. Importance of the Correlation between Width and Length in the Shape Analysis of Nanorods: Use of a 2D Size Plot To Probe Such a Correlation.

    PubMed

    Zhao, Zhihua; Zheng, Zhiqin; Roux, Clément; Delmas, Céline; Marty, Jean-Daniel; Kahn, Myrtil L; Mingotaud, Christophe

    2016-08-22

    Analysis of nanoparticle size through a simple 2D plot is proposed in order to extract the correlation between length and width in a collection or a mixture of anisotropic particles. Compared to the usual statistics on the length associated with a second and independent statistical analysis of the width, this simple plot easily points out the various types of nanoparticles and their (an)isotropy. For each class of nano-objects, the relationship between width and length (i.e., the strong or weak correlations between these two parameters) may suggest information concerning the nucleation/growth processes. It allows one to follow the effect on the shape and size distribution of physical or chemical processes such as simple ripening. Various electron microscopy pictures from the literature or from the authors' own syntheses are used as examples to demonstrate the efficiency and simplicity of the proposed 2D plot combined with a multivariate analysis. PMID:27460632

  5. Re-Dimensional Thinking in Earth Science: From 3-D Virtual Reality Panoramas to 2-D Contour Maps

    ERIC Educational Resources Information Center

    Park, John; Carter, Glenda; Butler, Susan; Slykhuis, David; Reid-Griffin, Angelia

    2008-01-01

    This study examines the relationship of gender and spatial perception on student interactivity with contour maps and non-immersive virtual reality. Eighteen eighth-grade students elected to participate in a six-week activity-based course called "3-D GeoMapping." The course included nine days of activities related to topographic mapping. At the end…

  6. 2-d Finite Element Code Postprocessor

    1996-07-15

    ORION is an interactive program that serves as a postprocessor for the analysis programs NIKE2D, DYNA2D, TOPAZ2D, and CHEMICAL TOPAZ2D. ORION reads binary plot files generated by the two-dimensional finite element codes currently used by the Methods Development Group at LLNL. Contour and color fringe plots of a large number of quantities may be displayed on meshes consisting of triangular and quadrilateral elements. ORION can compute strain measures, interface pressures along slide lines, reaction forcesmore » along constrained boundaries, and momentum. ORION has been applied to study the response of two-dimensional solids and structures undergoing finite deformations under a wide variety of large deformation transient dynamic and static problems and heat transfer analyses.« less

  7. Reconstruction of surfaces from planar contours through contour interpolation

    NASA Astrophysics Data System (ADS)

    Sunderland, Kyle; Woo, Boyeong; Pinter, Csaba; Fichtinger, Gabor

    2015-03-01

    Segmented structures such as targets or organs at risk are typically stored as 2D contours contained on evenly spaced cross sectional images (slices). Contour interpolation algorithms are implemented in radiation oncology treatment planning software to turn 2D contours into a 3D surface, however the results differ between algorithms, causing discrepancies in analysis. Our goal was to create an accurate and consistent contour interpolation algorithm that can handle issues such as keyhole contours, rapid changes, and branching. This was primarily motivated by radiation therapy research using the open source SlicerRT extension for the 3D Slicer platform. The implemented algorithm triangulates the mesh by minimizing the length of edges spanning the contours with dynamic programming. The first step in the algorithm is removing keyholes from contours. Correspondence is then found between contour layers and branching patterns are determined. The final step is triangulating the contours and sealing the external contours. The algorithm was tested on contours segmented on computed tomography (CT) images. Some cases such as inner contours, rapid changes in contour size, and branching were handled well by the algorithm when encountered individually. There were some special cases in which the simultaneous occurrence of several of these problems in the same location could cause the algorithm to produce suboptimal mesh. An open source contour interpolation algorithm was implemented in SlicerRT for reconstructing surfaces from planar contours. The implemented algorithm was able to generate qualitatively good 3D mesh from the set of 2D contours for most tested structures.

  8. magicaxis: Pretty scientific plotting with minor-tick and log minor-tick support

    NASA Astrophysics Data System (ADS)

    Robotham, Aaron S. G.

    2016-04-01

    The R suite magicaxis makes useful and pretty plots for scientific plotting and includes functions for base plotting, with particular emphasis on pretty axis labelling in a number of circumstances that are often used in scientific plotting. It also includes functions for generating images and contours that reflect the 2D quantile levels of the data designed particularly for output of MCMC posteriors where visualizing the location of the 68% and 95% 2D quantiles for covariant parameters is a necessary part of the post MCMC analysis, can generate low and high error bars, and allows clipping of values, rejection of bad values, and log stretching.

  9. Computer Programs for Plotting Spot-Beam Coverages from an Earth-Synchronous Satellite and Earth-Station Antenna Elevation Angle Contours. Memorandum Number 72/4.

    ERIC Educational Resources Information Center

    Stagl, Thomas W.; Singh, Jai P.

    Computer programs prepared in connection with a project on Application of Communication Satellites to Educational Development (see EM 010 449) are described and listed in this memorandum. First, the data tape containing a digitized map of the world which was used for the programs is described. Then the first program, WORLDMAP, which plots the tape…

  10. SutraPlot, a graphical post-processor for SUTRA, a model for ground-water flow with solute or energy transport

    USGS Publications Warehouse

    Souza, W.R.

    1999-01-01

    This report documents a graphical display post-processor (SutraPlot) for the U.S. Geological Survey Saturated-Unsaturated flow and solute or energy TRAnsport simulation model SUTRA, Version 2D3D.1. This version of SutraPlot is an upgrade to SutraPlot for the 2D-only SUTRA model (Souza, 1987). It has been modified to add 3D functionality, a graphical user interface (GUI), and enhanced graphic output options. Graphical options for 2D SUTRA (2-dimension) simulations include: drawing the 2D finite-element mesh, mesh boundary, and velocity vectors; plots of contours for pressure, saturation, concentration, and temperature within the model region; 2D finite-element based gridding and interpolation; and 2D gridded data export files. Graphical options for 3D SUTRA (3-dimension) simulations include: drawing the 3D finite-element mesh; plots of contours for pressure, saturation, concentration, and temperature in 2D sections of the 3D model region; 3D finite-element based gridding and interpolation; drawing selected regions of velocity vectors (projected on principal coordinate planes); and 3D gridded data export files. Installation instructions and a description of all graphic options are presented. A sample SUTRA problem is described and three step-by-step SutraPlot applications are provided. In addition, the methodology and numerical algorithms for the 2D and 3D finite-element based gridding and interpolation, developed for SutraPlot, are described. 1

  11. Creative Contours.

    ERIC Educational Resources Information Center

    Fashing, Edward; Appenbrink, David

    1978-01-01

    Students often have difficulty relating contour lines to the shape of a landform. This article describes the construction of a simple landform model designed to help students better understand contour lines. (MA)

  12. A general purpose contouring system

    USGS Publications Warehouse

    Evenden, Gerald Ian

    1975-01-01

    Three Decsystem-10 FORTRAN IV programs provide a general purpose system for contouring two-dimensional data. The system can provide both quick or final, publication quality contour maps on either interactive or offline plotting devices. Complete user documentation, with examples, and program listings are presented.

  13. Generalized gradient and contour program

    USGS Publications Warehouse

    Hellman, Marshall Strong

    1972-01-01

    This program computes estimates of gradients, prepares contour maps, and plots various sets of data provided by the user on the CalComp plotters. The gradients represent the maximum rates of change of a real variable Z=f(X,Y) with respect to the twodimensional rectangle on which the function is defined. The contours are lines of equal Z values. The program also plots special line data sets provided by the user.

  14. Plotting Lightning-Stroke Data

    NASA Technical Reports Server (NTRS)

    Tatom, F. B.; Garst, R. A.

    1986-01-01

    Data on lightning-stroke locations become easier to correlate with cloudcover maps with aid of new graphical treatment. Geographic region divided by grid into array of cells. Number of lightning strokes in each cell tabulated, and value representing density of lightning strokes assigned to each cell. With contour-plotting routine, computer draws contours of lightning-stroke density for region. Shapes of contours compared directly with shapes of storm cells.

  15. Contouring Trivariate Data

    NASA Technical Reports Server (NTRS)

    Stead, S. E.; Makatura, G. T.

    1985-01-01

    In many applications, the data consist of discrete 3-D points at which one or more parameters are given. To display contours, the data are represented by a continuous function which is evaluated at any point as needed for contouring. Contouring results are presented which are applicable both to artitrarily spaced data and to data which lie on a topologically rectangular three dimensional grid. the contours are assumed to be described by 3-D display lists for viewing on a dynamic color graphics device; that is, they will not simply be projected into 2-D and viewed as a static image on a frame buffer. Dynamic viewing of color contours may be essential to the proper interpretation of results. The gridded data lie on a topologically rectangular grid although two or more nodes may be the same point. Parametric tensor product methods may be used to fit the gridded data and to generate the contours. Rectangular elements are convenient but not necessary. For example, there are other methods which are effective for contouring over tetrahedral elements.

  16. Contour complexity and contour detection

    PubMed Central

    Wilder, John; Feldman, Jacob; Singh, Manish

    2015-01-01

    It is well-known that “smooth” chains of oriented elements—contours—are more easily detected amid background noise than more undulating (i.e., “less smooth”) chains. Here, we develop a Bayesian framework for contour detection and show that it predicts that contour detection performance should decrease with the contour's complexity, quantified as the description length (DL; i.e., the negative logarithm of probability integrated along the contour). We tested this prediction in two experiments in which subjects were asked to detect simple open contours amid pixel noise. In Experiment 1, we demonstrate a consistent decline in performance with increasingly complex contours, as predicted by the Bayesian model. In Experiment 2, we confirmed that this effect is due to integrated complexity along the contour, and does not seem to depend on local stretches of linear structure. The results corroborate the probabilistic model of contours, and show how contour detection can be understood as a special case of a more general process—the identification of organized patterns in the environment. PMID:26024453

  17. Tongue Motion Averaging from Contour Sequences

    ERIC Educational Resources Information Center

    Li, Min; Kambhamettu, Chandra; Stone, Maureen

    2005-01-01

    In this paper, a method to get the best representation of a speech motion from several repetitions is presented. Each repetition is a representation of the same speech captured at different times by sequence of ultrasound images and is composed of a set of 2D spatio-temporal contours. These 2D contours in different repetitions are time aligned…

  18. Program Manipulates Plots For Effective Display

    NASA Technical Reports Server (NTRS)

    Bauer, F.; Downing, J.

    1990-01-01

    Windowed Observation of Relative Motion (WORM) computer program primarily intended for generation of simple X-Y plots from data created by other programs. Enables user to label, zoom, and change scales of various plots. Three-dimensional contour and line plots provided. Written in PASCAL.

  19. Contour Mapping

    NASA Technical Reports Server (NTRS)

    1995-01-01

    In the early 1990s, the Ohio State University Center for Mapping, a NASA Center for the Commercial Development of Space (CCDS), developed a system for mobile mapping called the GPSVan. While driving, the users can map an area from the sophisticated mapping van equipped with satellite signal receivers, video cameras and computer systems for collecting and storing mapping data. George J. Igel and Company and the Ohio State University Center for Mapping advanced the technology for use in determining the contours of a construction site. The new system reduces the time required for mapping and staking, and can monitor the amount of soil moved.

  20. CONTOUR; a modification of G.I. Evenden's general purpose contouring program

    USGS Publications Warehouse

    Godson, R.H.; Webring, M.W.

    1982-01-01

    A contouring program written for the DEC-10 computer (Evenden, 1975) has been modified and enhanced to operate on a Honeywell Multics 68/80 computer. The program uses a device independent plotting system (Wahl, 1977) so that output can be directed to any of several plotting devices by simply specifying one input variable.

  1. MOSS2D V1

    2001-01-31

    This software reduces the data from two-dimensional kSA MOS program, k-Space Associates, Ann Arbor, MI. Initial MOS data is recorded without headers in 38 columns, with one row of data per acquisition per lase beam tracked. The final MOSS 2d data file is reduced, graphed, and saved in a tab-delimited column format with headers that can be plotted in any graphing software.

  2. Distributed Contour Trees

    SciTech Connect

    Morozov, Dmitriy; Weber, Gunther H.

    2014-03-31

    Topological techniques provide robust tools for data analysis. They are used, for example, for feature extraction, for data de-noising, and for comparison of data sets. This chapter concerns contour trees, a topological descriptor that records the connectivity of the isosurfaces of scalar functions. These trees are fundamental to analysis and visualization of physical phenomena modeled by real-valued measurements. We study the parallel analysis of contour trees. After describing a particular representation of a contour tree, called local{global representation, we illustrate how di erent problems that rely on contour trees can be solved in parallel with minimal communication.

  3. Male Body Contouring.

    PubMed

    Singh, Babu; Keaney, Terrence; Rossi, Anthony M

    2015-09-01

    Men are increasingly turning to dermatologists and plastic surgeons to request procedures that correct or enhance physical features. With the advent of this emerging new patient population, alterations in preexisting aesthetic techniques, gender-specific uses of existing devices and overall approaches need to be revisited and adapted to obtain results that are suitable for the male patient. Recently, body contouring has become one of the most sought out procedures by men. Although the majority of clinical studies involving body contouring esthetics are performed with female patients, gains from such studies can be extrapolated to men. Body contouring can be broadly classified as non-invasive or invasive, depending on the modality used. Non-invasive contouring is most frequently performed with devices that target subcutaneous adipose with focused electrical or thermal energy, including low-level laser, cryolipolysis, ultrasonography, and radiofrequency. Invasive body contouring modalities useful for male body contouring include liposuction, pectoral and abdominal wall etching, jawline fillers, synthetic deoxycholic acid injections, and solid silicone implants. The purpose of this review is to bring attention to the unique aspects, strategies, and modalities used in aesthetic body contouring for the male patient. PMID:26355627

  4. Modeling robot contour processes

    NASA Astrophysics Data System (ADS)

    Whitney, D. E.; Edsall, A. C.

    Robot contour processes include those with contact force like car body grinding or deburring of complex castings, as well as those with little or no contact force like inspection. This paper describes ways of characterizing, identifying, and estimating contours and robot trajectories. Contour and robot are modeled as stochastic processes in order to emphasize that both successive robot cycles and successive industrial workpieces are similar but not exactly the same. The stochastic models can be used to identify the state of a workpiece or process, or to design a filter to estimate workpiece, shape and robot position from robot-based measurements.

  5. NEMAR plotting computer program

    NASA Technical Reports Server (NTRS)

    Myler, T. R.

    1981-01-01

    A FORTRAN coded computer program which generates CalComp plots of trajectory parameters is examined. The trajectory parameters are calculated and placed on a data file by the Near Earth Mission Analysis Routine computer program. The plot program accesses the data file and generates the plots as defined by inputs to the plot program. Program theory, user instructions, output definitions, subroutine descriptions and detailed FORTRAN coding information are included. Although this plot program utilizes a random access data file, a data file of the same type and formatted in 102 numbers per record could be generated by any computer program and used by this plot program.

  6. Faster simulation plots

    NASA Technical Reports Server (NTRS)

    Fowell, Richard A.

    1989-01-01

    Most simulation plots are heavily oversampled. Ignoring unnecessary data points dramatically reduces plot time with imperceptible effect on quality. The technique is suited to most plot devices. The departments laser printer's speed was tripled for large simulation plots by data thinning. This reduced printer delays without the expense of a faster laser printer. Surpisingly, it saved computer time as well. All plot data are now thinned, including PostScript and terminal plots. The problem, solution, and conclusions are described. The thinning algorithm is described and performance studies are presented. To obtain FORTRAN 77 or C source listings, mail a SASE to the author.

  7. Combinatorial Geometry Printer Plotting.

    1987-01-05

    Picture generates plots of two-dimensional slices through the three-dimensional geometry described by the combinatorial geometry (CG) package used in such codes as MORSE and QAD-CG. These plots are printed on a standard line printer.

  8. Variable contour securing system

    NASA Technical Reports Server (NTRS)

    Zebus, P. P.; Packer, P. N.; Haynie, C. C. (Inventor)

    1978-01-01

    A variable contour securing system has a retaining structure for a member whose surface contains a variable contour. The retaining mechanism includes a spaced array of adjustable spindles mounted on a housing. Each spindle has a base member support cup at one end. A vacuum source is applied to the cups for seating the member adjacent to the cups. A locking mechanism sets the spindles in a predetermined position once the member has been secured to the spindle support cups.

  9. Contour-map encoding of shape for early vision

    NASA Technical Reports Server (NTRS)

    Kanerva, Pentti

    1990-01-01

    Contour maps provide a general method for recognizing 2-D shapes. All but blank images give rise to such maps, and people are good at recognizing objects and shapes from them. The maps are encoded easily in long feature vectors that are suitable for recognition by an associative memory. These properties of contour maps suggest a role for them in early visual perception. The prevalence of direction sensitive neurons in the visual cortex of mammals supports this view.

  10. Improved NASTRAN plotting

    NASA Technical Reports Server (NTRS)

    Chan, Gordon C.

    1991-01-01

    The new 1991 COSMIC/NASTRAN version, compatible with the older versions, tries to remove some old constraints and make it easier to extract information from the plot file. It also includes some useful improvements and new enhancements. New features available in the 1991 version are described. They include a new PLT1 tape with simplified ASCII plot commands and short records, combined hidden and shrunk plot, an x-y-z coordinate system on all structural plots, element offset plot, improved character size control, improved FIND and NOFIND logic, a new NASPLOT post-prosessor to perform screen plotting or generate PostScript files, and a BASIC/NASTPLOT program for PC.

  11. Contour detection based on brightness and contour completion

    NASA Astrophysics Data System (ADS)

    Zou, Lamei; Wan, Min; Jin, Liujia; Gao, Yahong; Yang, Weidong

    2015-12-01

    The further research of visual processing mechanism provides a new idea for contour detection. On the primary visual cortex, the non-classical receptive field of the neurons has the orientation selectivity exerts suppression effect on the response of classical receptive field, which influences edge or line perception. Based on the suppression property of non-classical receptive field and contour completion, this paper proposed a contour detection method based on brightness and contour completion. The experiment shows that the proposed method can not only effectively eliminate clutter information, but also connect the broken contour points by taking advantage of contour completion.

  12. Fancy plots for SIG

    SciTech Connect

    Norris, J.; Daniels, B.

    1986-02-01

    The fancy plot package is a group of five programs which allow the user to make 2- and 3-dimensional document quality plots from the SIG data base. The fancyplot package was developed using a DEC VT100 terminal fitted with a Digital Engineering Retrographics board and the QMS Laserprinter. If a terminal emulates the VT100/Retrographic terminal the package should work. A Pericom terminal for example, works perfectly. The fancy plot package is available to provide report-ready plots without resorting to cutting and pasting. This package is contained in programs FFP, TFP, TDFD, 3DFFP and 3DTFP in directory ERD131::USER2 DISK:(HUDSON.SIG). These programs may be summarized as follows: FFP - 2-Dimensional Frequency Fancy Plots with magnitude/phase option; TFP - 2-Dimensional Time Fancy Plots; TDFD - 2-Dimensional Time Domain Frequency Domain Plots; and 3DFFP - equally spaced 3-Dimensional Frequency Fancy Plots; 3DTFP - equally spaced 3-Dimensional Time Plots. 8 figs.

  13. Assessing crop yield benefits from in situ rainwater harvesting through contour ridges in semi-arid Zimbabwe

    NASA Astrophysics Data System (ADS)

    Mhizha, A.; Ndiritu, J. G.

    Rainwater harvesting through modified contour ridges known as dead level contours has been practiced in Zimbabwe in the last two decades. Studies have shown marginal soil moisture retention benefits for using this technique while results on crop yield benefits are lacking. This paper presents results from a field study for assessing the impact of dead level contours on soil moisture and crop yield carried out from 2009 to 2011 within the Limpopo River Basin. The experiments were carried out on two study sites; one containing silt loam soil and another containing sandy soil. Three treatments constituting dead level contoured plots, non-contoured plots and plots with the traditional graded contours were used on each site. All the three treatments were planted with a maize crop and managed using conventional farming methods. Planting, weeding and fertiliser application in the three treatments were done at the same time. Crop monitoring was carried out on sub plots measuring 4 m by 4 m established in every treatment. The development of the crop was monitored until harvesting time with data on plant height, leaf moisture and crop yield being collected. An analysis of the data shows that in the site with silt loam soil more soil moisture accumulated after heavy rainfall in dead level contour plots compared to the control (no contours) and graded contour plots (P < 0.05). However the maize crop experienced an insignificantly (P > 0.05) higher yield in the dead level contoured treatment compared to the non-contoured treatment while a significantly (P < 0.05) higher yield was obtained in the dead level contoured treatment when compared with a graded contoured treatment. Different results were obtained from the site with sandy soil where there was no significant difference in soil moisture after a high rainfall event of 60 mm/day between dead level contour plots compared to the control and graded contour plots. The yield from the dead level contoured treatment and that from

  14. STILTS Plotting Tools

    NASA Astrophysics Data System (ADS)

    Taylor, M. B.

    2009-09-01

    The new plotting functionality in version 2.0 of STILTS is described. STILTS is a mature and powerful package for all kinds of table manipulation, and this version adds facilities for generating plots from one or more tables to its existing wide range of non-graphical capabilities. 2- and 3-dimensional scatter plots and 1-dimensional histograms may be generated using highly configurable style parameters. Features include multiple dataset overplotting, variable transparency, 1-, 2- or 3-dimensional symmetric or asymmetric error bars, higher-dimensional visualization using color, and textual point labeling. Vector and bitmapped output formats are supported. The plotting options provide enough flexibility to perform meaningful visualization on datasets from a few points up to tens of millions. Arbitrarily large datasets can be plotted without heavy memory usage.

  15. Compressing industrial computed tomography images by means of contour coding

    NASA Astrophysics Data System (ADS)

    Jiang, Haina; Zeng, Li

    2013-10-01

    An improved method for compressing industrial computed tomography (CT) images is presented. To have higher resolution and precision, the amount of industrial CT data has become larger and larger. Considering that industrial CT images are approximately piece-wise constant, we develop a compression method based on contour coding. The traditional contour-based method for compressing gray images usually needs two steps. The first is contour extraction and then compression, which is negative for compression efficiency. So we merge the Freeman encoding idea into an improved method for two-dimensional contours extraction (2-D-IMCE) to improve the compression efficiency. By exploiting the continuity and logical linking, preliminary contour codes are directly obtained simultaneously with the contour extraction. By that, the two steps of the traditional contour-based compression method are simplified into only one. Finally, Huffman coding is employed to further losslessly compress preliminary contour codes. Experimental results show that this method can obtain a good compression ratio as well as keeping satisfactory quality of compressed images.

  16. Aniso2D

    2005-07-01

    Aniso2d is a two-dimensional seismic forward modeling code. The earth is parameterized by an X-Z plane in which the seismic properties Can have monoclinic with x-z plane symmetry. The program uses a user define time-domain wavelet to produce synthetic seismograms anrwhere within the two-dimensional media.

  17. PLplot: Cross-platform Software Package for Scientific Plots

    NASA Astrophysics Data System (ADS)

    Many Developers

    2011-06-01

    PLplot is a cross-platform software package for creating scientific plots. To help accomplish that task it is organized as a core C library, language bindings for that library, and device drivers which control how the plots are presented in non-interactive and interactive plotting contexts. The PLplot core library can be used to create standard x-y plots, semi-log plots, log-log plots, contour plots, 3D surface plots, mesh plots, bar charts and pie charts. Multiple graphs (of the same or different sizes) may be placed on a single page, and multiple pages are allowed for those device formats that support them. PLplot has core support for Unicode. This means for our many Unicode-aware devices that plots can be labelled using the enormous selection of Unicode mathematical symbols. A large subset of our Unicode-aware devices also support complex text layout (CTL) languages such as Arabic, Hebrew, and Indic and Indic-derived CTL scripts such as Devanagari, Thai, Lao, and Tibetan. PLplot device drivers support a number of different file formats for non-interactive plotting and a number of different platforms that are suitable for interactive plotting. It is easy to add new device drivers to PLplot by writing a small number of device dependent routines.

  18. The Development of Contour Interpolation: Evidence from Subjective Contours

    ERIC Educational Resources Information Center

    Hadad, Bat-Sheva; Maurer, Daphne; Lewis, Terri L.

    2010-01-01

    Adults are skilled at perceiving subjective contours in regions without any local image information (e.g., [Ginsburg, 1975] and [Kanizsa, 1976]). Here we examined the development of this skill and the effect thereon of the support ratio (i.e., the ratio of the physically specified contours to the total contour length). Children (6-, 9-, and…

  19. Runoff through and upslope of contour switchgrass hedges

    Technology Transfer Automated Retrieval System (TEKTRAN)

    Grass hedges are specialized vegetative buffers effective in trapping sediment but less is known about their ability to reduce and/or redirect runoff. Runoff and sediment yield from natural rainfall were measured during eight years from 0.1-ha contour-planted plots with and without 1-m wide switchgr...

  20. Mesh2d

    SciTech Connect

    Greg Flach, Frank Smith

    2011-12-31

    Mesh2d is a Fortran90 program designed to generate two-dimensional structured grids of the form [x(i),y(i,j)] where [x,y] are grid coordinates identified by indices (i,j). The x(i) coordinates alone can be used to specify a one-dimensional grid. Because the x-coordinates vary only with the i index, a two-dimensional grid is composed in part of straight vertical lines. However, the nominally horizontal y(i,j0) coordinates along index i are permitted to undulate or otherwise vary. Mesh2d also assigns an integer material type to each grid cell, mtyp(i,j), in a user-specified manner. The complete grid is specified through three separate input files defining the x(i), y(i,j), and mtyp(i,j) variations.

  1. Mesh2d

    2011-12-31

    Mesh2d is a Fortran90 program designed to generate two-dimensional structured grids of the form [x(i),y(i,j)] where [x,y] are grid coordinates identified by indices (i,j). The x(i) coordinates alone can be used to specify a one-dimensional grid. Because the x-coordinates vary only with the i index, a two-dimensional grid is composed in part of straight vertical lines. However, the nominally horizontal y(i,j0) coordinates along index i are permitted to undulate or otherwise vary. Mesh2d also assignsmore » an integer material type to each grid cell, mtyp(i,j), in a user-specified manner. The complete grid is specified through three separate input files defining the x(i), y(i,j), and mtyp(i,j) variations.« less

  2. Vertical 2D Heterostructures

    NASA Astrophysics Data System (ADS)

    Lotsch, Bettina V.

    2015-07-01

    Graphene's legacy has become an integral part of today's condensed matter science and has equipped a whole generation of scientists with an armory of concepts and techniques that open up new perspectives for the postgraphene area. In particular, the judicious combination of 2D building blocks into vertical heterostructures has recently been identified as a promising route to rationally engineer complex multilayer systems and artificial solids with intriguing properties. The present review highlights recent developments in the rapidly emerging field of 2D nanoarchitectonics from a materials chemistry perspective, with a focus on the types of heterostructures available, their assembly strategies, and their emerging properties. This overview is intended to bridge the gap between two major—yet largely disjunct—developments in 2D heterostructures, which are firmly rooted in solid-state chemistry or physics. Although the underlying types of heterostructures differ with respect to their dimensions, layer alignment, and interfacial quality, there is common ground, and future synergies between the various assembly strategies are to be expected.

  3. Contour-based two-dimension mask pattern metrology

    NASA Astrophysics Data System (ADS)

    Tian, Mingjing; Wang, Jianwei; Bandoh, Hideaki; Guo, Eric; Lu, Max

    2015-10-01

    Mask pattern measurement becomes one of the main challenges for the quality evaluation of the mask which is applied with complex lithography optical effect correction. Traditional straight edge mask pattern is evaluated with 1-dimension Critical Dimension (CD) method. But for 2-dimension pattern especially the mask full filled with complex shapes OPC pattern, many special approaches are studied attempt to characterize 2D pattern from different points of view [1-5]. A simple CD's information and the traditional mask performance evaluation parameters, such as CD mean-to-target and CD uniformity, are no longer suitable to such 2D pattern due to lacking of the pattern's character descriptions. Therefore the CD performances may not represent the actual wafer printing result in many cases. In addition, non-straight pattern edge induces significant CD measure error which makes it difficult to clarify the real mask pattern making quality. This paper investigates a pattern contour based solution for 2D structure performance evaluation. The basic contours of GDS and CD-SEM image are extracted, overlapped and processed and then the edge roughness of SEM contour and the bias between the above two kinds of contour are adopted on 2D individual pattern performance's statistics. By utilizing this solution, the 2D pattern quality can be described quantitatively as two main aspects, shape and size with the results of edge roughness and bias. Generalize this solution, the 2D pattern's uniformity, mean size, or other performances, can be evaluated quantitatively in the similar way as well. This solution calculation bases on pattern contour, therefore the measure pattern is not restricted by its shape.

  4. IRIS Spectrum Line Plot

    NASA Video Gallery

    This video shows a line plot of the spectrum. The spectra here are shown for various locations on the Sun. The changes in the movie are caused by differing physical conditions in the locations. Cre...

  5. PlotData

    2001-01-12

    Plot Data collects and saves waveforms from specified digitizers, displays waveform data on the screen with hard copy option, and performs specific waveform data reduction types including but not limited to VISAR.

  6. WinPlot

    NASA Technical Reports Server (NTRS)

    Moody, John R.

    2004-01-01

    WinPlot is a powerful desktop graphical analysis tool that allows the user to generate displays of unrestrictive amounts of data. It is designed to operate on a Windows 98/NT/2000 based desktop platform. WinPlot was developed to fulfill the need for fast and easily managed graphical displays of NASA test articles and facilities with extreme amount of test data in a desktop-computer environment.

  7. The contour method: a new approach in experimental mechanics

    SciTech Connect

    Prime, Michael B

    2009-01-01

    The recently developed contour method can measure complex residual-stress maps in situations where other measurement methods cannot. This talk first describes the principle of the contour method. A part is cut in two using a precise and low-stress cutting technique such as electric discharge machining. The contour of the resulting new surface, which will not be flat if residual stresses are relaxed by the cutting, is then measured. Finally, a conceptually simple finite element analysis determines the original residual stresses from the measured contour. Next, this talk gives several examples of applications. The method is validated by comparing with neutron diffraction measurements in an indented steel disk and in a friction stir weld between dissimilar aluminum alloys. Several applications are shown that demonstrate the power of the contour method: large aluminum forgings, railroad rails, and welds. Finally, this talk discusses why the contour method is significant departure from conventional experimental mechanics. Other relaxation method, for example hole-drilling, can only measure a 1-D profile of residual stresses, and yet they require a complicated inverse calculation to determine the stresses from the strain data. The contour method gives a 2-D stress map over a full cross-section, yet a direct calculation is all that is needed to reduce the data. The reason for these advantages lies in a subtle but fundamental departure from conventional experimental mechanics. Applying new technology to old methods like will not give similar advances, but the new approach also introduces new errors.

  8. NPLOT - NASTRAN PLOT

    NASA Technical Reports Server (NTRS)

    Mcentire, K.

    1994-01-01

    NPLOT is an interactive computer graphics program for plotting undeformed and deformed NASTRAN finite element models (FEMs). Although there are many commercial codes already available for plotting FEMs, these have limited use due to their cost, speed, and lack of features to view BAR elements. NPLOT was specifically developed to overcome these limitations. On a vector type graphics device the two best ways to show depth are by hidden line plotting or haloed line plotting. A hidden line algorithm generates views of models with all hidden lines removed, and a haloed line algorithm displays views with aft lines broken in order to show depth while keeping the entire model visible. A haloed line algorithm is especially useful for plotting models composed of many line elements and few surface elements. The most important feature of NPLOT is its ability to create both hidden line and haloed line views accurately and much more quickly than with any other existing hidden or haloed line algorithms. NPLOT is also capable of plotting a normal wire frame view to display all lines of a model. NPLOT is able to aid in viewing all elements, but it has special features not generally available for plotting BAR elements. These features include plotting of TRUE LENGTH and NORMALIZED offset vectors and orientation vectors. Standard display operations such as rotation and perspective are possible, but different view planes such as X-Y, Y-Z, and X-Z may also be selected. Another display option is the Z-axis cut which allows a portion of the fore part of the model to be cut away to reveal details of the inside of the model. A zoom function is available to terminals with a locator (graphics cursor, joystick, etc.). The user interface of NPLOT is designed to make the program quick and easy to use. A combination of menus and commands with help menus for detailed information about each command allows experienced users greater speed and efficiency. Once a plot is on the screen the interface

  9. [Post bariatric body contouring.

    PubMed

    Winge, Rikke; Henriksen, Trine Foged; Printzlau, Andreas; Hülmich, Lisbet

    2014-03-17

    Post bariatric body contouring in Denmark is currently a field under development. The scope of this article is to give an overview of existing plastic surgery techniques being used to treat patients with massive weight loss, as well as the current indications for patient referral. Furthermore, we describe how to optimise the preoperative evaluation of the patient and give a brief description of potential surgical adverse effects and their prevalence. Further research can provide this field with invaluable data regarding the post-operative effects on patient rehabilitation and quality of life. PMID:25096208

  10. matplotlib -- A Portable Python Plotting Package

    NASA Astrophysics Data System (ADS)

    Barrett, P.; Hunter, J.; Miller, J. T.; Hsu, J.-C.; Greenfield, P.

    2005-12-01

    matplotlib is a portable 2D plotting and imaging package aimed primarily at visualization of scientific, engineering, and financial data. matplotlib can be used interactively from the Python shell, called from python scripts, or embedded in a GUI application (GTK, Wx, Tk, Windows). Many popular hardcopy outputs are supported including JPEG, PNG, PostScript and SVG. Features include the creation of multiple axes and figures per page, interactive navigation, many predefined line styles and symbols, images, antialiasing, alpha blending, date and financial plots, W3C compliant font management and FreeType2 support, legends and tables, pseudocolor plots, mathematical text and more. It works with both numarray and Numeric. The goals of the package, basic architecture, current features (illustrated with examples), and planned enhancements will be described.

  11. Graph-Plotting Routine

    NASA Technical Reports Server (NTRS)

    Kantak, Anil V.

    1987-01-01

    Plotter routine for IBM PC (AKPLOT) designed for engineers and scientists who use graphs as integral parts of their documentation. Allows user to generate graph and edit its appearance on cathode-ray tube. Graph may undergo many interactive alterations before finally dumped from screen to be plotted by printer. Written in BASIC.

  12. Contour Completion Without Region Segmentation.

    PubMed

    Ming, Yansheng; Li, Hongdong; He, Xuming

    2016-08-01

    Contour completion plays an important role in visual perception, where the goal is to group fragmented low-level edge elements into perceptually coherent and salient contours. Most existing methods for contour completion have focused on pixelwise detection accuracy. In contrast, fewer methods have addressed the global contour closure effect, despite psychological evidences for its importance. This paper proposes a purely contour-based higher order CRF model to achieve contour closure, through local connectedness approximation. This leads to a simplified problem structure, where our higher order inference problem can be transformed into an integer linear program and be solved efficiently. Compared with the methods based on the same bottom-up edge detector, our method achieves a superior contour grouping ability (measured by Rand index), a comparable precision-recall performance, and more visually pleasing results. Our results suggest that contour closure can be effectively achieved in contour domain, in contrast to a popular view that segmentation is essential for this purpose. PMID:27168599

  13. Method for contour extraction for object representation

    DOEpatents

    Skourikhine, Alexei N.; Prasad, Lakshman

    2005-08-30

    Contours are extracted for representing a pixelated object in a background pixel field. An object pixel is located that is the start of a new contour for the object and identifying that pixel as the first pixel of the new contour. A first contour point is then located on the mid-point of a transition edge of the first pixel. A tracing direction from the first contour point is determined for tracing the new contour. Contour points on mid-points of pixel transition edges are sequentially located along the tracing direction until the first contour point is again encountered to complete tracing the new contour. The new contour is then added to a list of extracted contours that represent the object. The contour extraction process associates regions and contours by labeling all the contours belonging to the same object with the same label.

  14. Precision contour gage

    DOEpatents

    Bieg, Lothar F.

    1990-12-11

    An apparatus for gaging the contour of a machined part includes a rotary slide assembly, a kinematic mount to move the apparatus into and out of position for measuring the part while the part is still on the machining apparatus, a linear probe assembly with a suspension arm and a probe assembly including as probe tip for providing a measure of linear displacement of the tip on the surface of the part, a means for changing relative positions between the part and the probe tip, and a means for recording data points representing linear positions of the probe tip at prescribed rotation intervals in the position changes between the part and the probe tip.

  15. Precision contour gage

    DOEpatents

    Bieg, L.F.

    1990-12-11

    An apparatus for gaging the contour of a machined part includes a rotary slide assembly, a kinematic mount to move the apparatus into and out of position for measuring the part while the part is still on the machining apparatus, a linear probe assembly with a suspension arm and a probe assembly including as probe tip for providing a measure of linear displacement of the tip on the surface of the part, a means for changing relative positions between the part and the probe tip, and a means for recording data points representing linear positions of the probe tip at prescribed rotation intervals in the position changes between the part and the probe tip. 5 figs.

  16. Film coatings for contoured surfaces

    NASA Technical Reports Server (NTRS)

    Flanery, H. E.; Frost, R. K.; Olson, A. J.

    1981-01-01

    Thickness of fluorocarbon elastomer films applied in contoured shapes by vacuum forming is difficult to control at sharply curved areas. Process for spraying contoured fluorocarbon elastomer films of uniform strength and thickness has been used instead of vacuum forming to fabricate curtain covering external tank of Space Shuttle. Conventional spray equipment may be used.

  17. Sensory Information and Subjective Contour

    ERIC Educational Resources Information Center

    Brussell, Edward M.; And Others

    1977-01-01

    The possibility that subjective contours are an artifact of brightness contrast was explored. Concludes that subjective contour and brightness contrast are distinct perceptual phenomena but share a dependency on the processing of edge information transmitted through the achromatic channels of the visual system. (Editor/RK)

  18. Three-Dimensional Contour Maps

    ERIC Educational Resources Information Center

    Lee, Edward

    2005-01-01

    In summary, this highly conceptual activity helps middle school students understand that the lines on the contour map represent intersections of the surface of the landform with regularly spaced horizontal planes. Building the landform and relating its features to the contour map offer many opportunities for visualization, all grounded in concrete…

  19. MAINE CONTOUR LINES 500 FEET

    EPA Science Inventory

    MECON500 contains 500 foot contour intervals for Maine, generated from USGS 1:250,000 DEMs. Arcs are coded by elevation. Due to the nature of the source data, the positional accuracy of these contour lines varies from good to poor. Use of these data at scales of greater then 1:2...

  20. MAINE CONTOUR LINES 60 FEET

    EPA Science Inventory

    MECON60 contains contours at 60 foot intervals for the entire state of Maine as generated from USGS 1:250,000 scale digital elevation models using ARC/INFO software. Arcs are coded by elevation. Due to the nature of the source data, the positional accuracy of these contour line...

  1. Contour Integration across Spatial Frequency

    ERIC Educational Resources Information Center

    Persike, Malte; Olzak, Lynn A.; Meinhardt, Gunter

    2009-01-01

    Association field models of contour integration suggest that local band-pass elements are spatially grouped to global contours within limited bands of spatial frequency (Field, Hayes, & Hess, 1993). While results for local orientation and spacing variation render support for AF models, effects of spatial frequency (SF) have rarely been addressed.…

  2. SU-E-J-108: Solving the Chinese Postman Problem for Effective Contour Deformation

    SciTech Connect

    Yang, J; Zhang, L; Balter, P; Court, L; Zhang, Y; Dong, L

    2015-06-15

    Purpose: To develop a practical approach for accurate contour deformation when deformable image registration (DIR) is used for atlas-based segmentation or contour propagation in image-guided radiotherapy. Methods: A contour deformation approach was developed on the basis of 3D mesh operations. The 2D contours represented by a series of points in each slice were first converted to a 3D triangular mesh, which was deformed by the deformation vectors resulting from DIR. A set of parallel 2D planes then cut through the deformed 3D mesh, generating unordered points and line segments, which should be reorganized into a set of 2D contour points. It was realized that the reorganization problem was equivalent to solving the Chinese Postman Problem (CPP) by traversing a graph built from the unordered points with the least cost. Alternatively, deformation could be applied to a binary mask converted from the original contours. The deformed binary mask was then converted back into contours at the CT slice locations. We performed a qualitative comparison to validate the mesh-based approach against the image-based approach. Results: The DIR could considerably change the 3D mesh, making complicated 2D contour representations after deformation. CPP was able to effectively reorganize the points in 2D planes no matter how complicated the 2D contours were. The mesh-based approach did not require a post-processing of the contour, thus accurately showing the actual deformation in DIR. The mesh-based approach could keep some fine details and resulted in smoother contours than the image-based approach did, especially for the lung structure. Image-based approach appeared to over-process contours and suffered from image resolution limits. The mesh-based approach was integrated into in-house DIR software for use in routine clinic and research. Conclusion: We developed a practical approach for accurate contour deformation. The efficiency of this approach was demonstrated in both clinic and

  3. Splatterplots: Overcoming Overdraw in Scatter Plots

    PubMed Central

    Mayorga, Adrian; Gleicher, Michael

    2014-01-01

    We introduce Splatterplots, a novel presentation of scattered data that enables visualizations that scale beyond standard scatter plots. Traditional scatter plots suffer from overdraw (overlapping glyphs) as the number of points per unit area increases. Overdraw obscures outliers, hides data distributions, and makes the relationship among subgroups of the data difficult to discern. To address these issues, Splatterplots abstract away information such that the density of data shown in any unit of screen space is bounded, while allowing continuous zoom to reveal abstracted details. Abstraction automatically groups dense data points into contours and samples remaining points. We combine techniques for abstraction with with perceptually based color blending to reveal the relationship between data subgroups. The resulting visualizations represent the dense regions of each subgroup of the dataset as smooth closed shapes and show representative outliers explicitly. We present techniques that leverage the GPU for Splatterplot computation and rendering, enabling interaction with massive data sets. We show how splatterplots can be an effective alternative to traditional methods of displaying scatter data communicating data trends, outliers, and data set relationships much like traditional scatter plots, but scaling to data sets of higher density and up to millions of points on the screen. PMID:23846097

  4. Contour Error Map Algorithm

    NASA Technical Reports Server (NTRS)

    Merceret, Francis; Lane, John; Immer, Christopher; Case, Jonathan; Manobianco, John

    2005-01-01

    The contour error map (CEM) algorithm and the software that implements the algorithm are means of quantifying correlations between sets of time-varying data that are binarized and registered on spatial grids. The present version of the software is intended for use in evaluating numerical weather forecasts against observational sea-breeze data. In cases in which observational data come from off-grid stations, it is necessary to preprocess the observational data to transform them into gridded data. First, the wind direction is gridded and binarized so that D(i,j;n) is the input to CEM based on forecast data and d(i,j;n) is the input to CEM based on gridded observational data. Here, i and j are spatial indices representing 1.25-km intervals along the west-to-east and south-to-north directions, respectively; and n is a time index representing 5-minute intervals. A binary value of D or d = 0 corresponds to an offshore wind, whereas a value of D or d = 1 corresponds to an onshore wind. CEM includes two notable subalgorithms: One identifies and verifies sea-breeze boundaries; the other, which can be invoked optionally, performs an image-erosion function for the purpose of attempting to eliminate river-breeze contributions in the wind fields.

  5. PLOT3D/AMES, DEC VAX VMS VERSION USING DISSPLA (WITH TURB3D)

    NASA Technical Reports Server (NTRS)

    Buning, P.

    1994-01-01

    five groups: 1) Grid Functions for grids, grid-checking, etc.; 2) Scalar Functions for contour or carpet plots of density, pressure, temperature, Mach number, vorticity magnitude, helicity, etc.; 3) Vector Functions for vector plots of velocity, vorticity, momentum, and density gradient, etc.; 4) Particle Trace Functions for rake-like plots of particle flow or vortex lines; and 5) Shock locations based on pressure gradient. TURB3D is a modification of PLOT3D which is used for viewing CFD simulations of incompressible turbulent flow. Input flow data consists of pressure, velocity and vorticity. Typical quantities to plot include local fluctuations in flow quantities and turbulent production terms, plotted in physical or wall units. PLOT3D/TURB3D includes both TURB3D and PLOT3D because the operation of TURB3D is identical to PLOT3D, and there is no additional sample data or printed documentation for TURB3D. Graphical capabilities of PLOT3D version 3.6b+ vary among the implementations available through COSMIC. Customers are encouraged to purchase and carefully review the PLOT3D manual before ordering the program for a specific computer and graphics library. There is only one manual for use with all implementations of PLOT3D, and although this manual generally assumes that the Silicon Graphics Iris implementation is being used, informative comments concerning other implementations appear throughout the text. With all implementations, the visual representation of the object and flow field created by PLOT3D consists of points, lines, and polygons. Points can be represented with dots or symbols, color can be used to denote data values, and perspective is used to show depth. Differences among implementations impact the program's ability to use graphical features that are based on 3D polygons, the user's ability to manipulate the graphical displays, and the user's ability to obtain alternate forms of output. The VAX/VMS/DISSPLA implementation of PLOT3D supports 2-D polygons as

  6. PLOT3D/AMES, DEC VAX VMS VERSION USING DISSPLA (WITHOUT TURB3D)

    NASA Technical Reports Server (NTRS)

    Buning, P. G.

    1994-01-01

    five groups: 1) Grid Functions for grids, grid-checking, etc.; 2) Scalar Functions for contour or carpet plots of density, pressure, temperature, Mach number, vorticity magnitude, helicity, etc.; 3) Vector Functions for vector plots of velocity, vorticity, momentum, and density gradient, etc.; 4) Particle Trace Functions for rake-like plots of particle flow or vortex lines; and 5) Shock locations based on pressure gradient. TURB3D is a modification of PLOT3D which is used for viewing CFD simulations of incompressible turbulent flow. Input flow data consists of pressure, velocity and vorticity. Typical quantities to plot include local fluctuations in flow quantities and turbulent production terms, plotted in physical or wall units. PLOT3D/TURB3D includes both TURB3D and PLOT3D because the operation of TURB3D is identical to PLOT3D, and there is no additional sample data or printed documentation for TURB3D. Graphical capabilities of PLOT3D version 3.6b+ vary among the implementations available through COSMIC. Customers are encouraged to purchase and carefully review the PLOT3D manual before ordering the program for a specific computer and graphics library. There is only one manual for use with all implementations of PLOT3D, and although this manual generally assumes that the Silicon Graphics Iris implementation is being used, informative comments concerning other implementations appear throughout the text. With all implementations, the visual representation of the object and flow field created by PLOT3D consists of points, lines, and polygons. Points can be represented with dots or symbols, color can be used to denote data values, and perspective is used to show depth. Differences among implementations impact the program's ability to use graphical features that are based on 3D polygons, the user's ability to manipulate the graphical displays, and the user's ability to obtain alternate forms of output. The VAX/VMS/DISSPLA implementation of PLOT3D supports 2-D polygons as

  7. On the Nature of Earth-Mars Porkchop Plots

    NASA Technical Reports Server (NTRS)

    Woolley, Ryan C.; Whetsel, Charles W.

    2013-01-01

    Porkchop plots are a quick and convenient tool to help mission designers plan ballistic trajectories between two bodies. Parameter contours give rise to the familiar 'porkchop' shape. Each synodic period the pattern repeats, but not exactly, primarily due to differences in inclination and non-zero eccentricity. In this paper we examine the morphological features of Earth-to-Mars porkchop plots and the orbital characteristics that create them. These results are compared to idealistic and optimized transfers. Conclusions are drawn about 'good' opportunities versus 'bad' opportunities for different mission applications.

  8. Visualization of a Large Set of Hydrogen Atomic Orbital Contours Using New and Expanded Sets of Parametric Equations

    ERIC Educational Resources Information Center

    Rhile, Ian J.

    2014-01-01

    Atomic orbitals are a theme throughout the undergraduate chemistry curriculum, and visualizing them has been a theme in this journal. Contour plots as isosurfaces or contour lines in a plane are the most familiar representations of the hydrogen wave functions. In these representations, a surface of a fixed value of the wave function ? is plotted…

  9. Application of SEM-based contours for OPC model weighting and sample plan reduction

    NASA Astrophysics Data System (ADS)

    Miller, Marshal; Hitomi, Keiichiro; Halle, Scott; Graur, Ioana; Bailey, Todd

    2015-03-01

    Continued improvements in SEM contour extraction capabilities have enabled calibrating more accurate OPC models for advanced technology nodes using a hybrid approach, combining CDs for 1D structures and full contour measurements for more complex 2D patterns. Previous work has addressed various components of contour modeling including alignment, edge detection, CD to contour consistency, and image parameter space coverage. This study covers weighting strategies for CDs compared to contours. Additionally the total number of structures in a sample plan can be reduced by incorporating contours for model calibration due to the increased number of evaluation points they provide. Repeated measurements of the same structure at separate locations are used to extract SEM contours across several instances. The average measurements from these locations can then be used for OPC model calibration. Using 14nm process data, it is shown that including more contours in hybrid OPC model calibration leads to improved model verification. Within an appropriate range, higher weight on the contour patterns leads to improved model verification on measurement sites unseen by the calibration set. Calibrating a model with fewer contour structures, but at higher weight shows improvement over standard CD only model calibration.

  10. High divergent 2D grating

    NASA Astrophysics Data System (ADS)

    Wang, Jin; Ma, Jianyong; Zhou, Changhe

    2014-11-01

    A 3×3 high divergent 2D-grating with period of 3.842μm at wavelength of 850nm under normal incidence is designed and fabricated in this paper. This high divergent 2D-grating is designed by the vector theory. The Rigorous Coupled Wave Analysis (RCWA) in association with the simulated annealing (SA) is adopted to calculate and optimize this 2D-grating.The properties of this grating are also investigated by the RCWA. The diffraction angles are more than 10 degrees in the whole wavelength band, which are bigger than the traditional 2D-grating. In addition, the small period of grating increases the difficulties of fabrication. So we fabricate the 2D-gratings by direct laser writing (DLW) instead of traditional manufacturing method. Then the method of ICP etching is used to obtain the high divergent 2D-grating.

  11. PLOT3D/AMES, GENERIC UNIX VERSION USING DISSPLA (WITHOUT TURB3D)

    NASA Technical Reports Server (NTRS)

    Buning, P.

    1994-01-01

    five groups: 1) Grid Functions for grids, grid-checking, etc.; 2) Scalar Functions for contour or carpet plots of density, pressure, temperature, Mach number, vorticity magnitude, helicity, etc.; 3) Vector Functions for vector plots of velocity, vorticity, momentum, and density gradient, etc.; 4) Particle Trace Functions for rake-like plots of particle flow or vortex lines; and 5) Shock locations based on pressure gradient. TURB3D is a modification of PLOT3D which is used for viewing CFD simulations of incompressible turbulent flow. Input flow data consists of pressure, velocity and vorticity. Typical quantities to plot include local fluctuations in flow quantities and turbulent production terms, plotted in physical or wall units. PLOT3D/TURB3D includes both TURB3D and PLOT3D because the operation of TURB3D is identical to PLOT3D, and there is no additional sample data or printed documentation for TURB3D. Graphical capabilities of PLOT3D version 3.6b+ vary among the implementations available through COSMIC. Customers are encouraged to purchase and carefully review the PLOT3D manual before ordering the program for a specific computer and graphics library. There is only one manual for use with all implementations of PLOT3D, and although this manual generally assumes that the Silicon Graphics Iris implementation is being used, informative comments concerning other implementations appear throughout the text. With all implementations, the visual representation of the object and flow field created by PLOT3D consists of points, lines, and polygons. Points can be represented with dots or symbols, color can be used to denote data values, and perspective is used to show depth. Differences among implementations impact the program's ability to use graphical features that are based on 3D polygons, the user's ability to manipulate the graphical displays, and the user's ability to obtain alternate forms of output. The UNIX/DISSPLA implementation of PLOT3D supports 2-D polygons as

  12. PLOT3D/AMES, GENERIC UNIX VERSION USING DISSPLA (WITH TURB3D)

    NASA Technical Reports Server (NTRS)

    Buning, P.

    1994-01-01

    five groups: 1) Grid Functions for grids, grid-checking, etc.; 2) Scalar Functions for contour or carpet plots of density, pressure, temperature, Mach number, vorticity magnitude, helicity, etc.; 3) Vector Functions for vector plots of velocity, vorticity, momentum, and density gradient, etc.; 4) Particle Trace Functions for rake-like plots of particle flow or vortex lines; and 5) Shock locations based on pressure gradient. TURB3D is a modification of PLOT3D which is used for viewing CFD simulations of incompressible turbulent flow. Input flow data consists of pressure, velocity and vorticity. Typical quantities to plot include local fluctuations in flow quantities and turbulent production terms, plotted in physical or wall units. PLOT3D/TURB3D includes both TURB3D and PLOT3D because the operation of TURB3D is identical to PLOT3D, and there is no additional sample data or printed documentation for TURB3D. Graphical capabilities of PLOT3D version 3.6b+ vary among the implementations available through COSMIC. Customers are encouraged to purchase and carefully review the PLOT3D manual before ordering the program for a specific computer and graphics library. There is only one manual for use with all implementations of PLOT3D, and although this manual generally assumes that the Silicon Graphics Iris implementation is being used, informative comments concerning other implementations appear throughout the text. With all implementations, the visual representation of the object and flow field created by PLOT3D consists of points, lines, and polygons. Points can be represented with dots or symbols, color can be used to denote data values, and perspective is used to show depth. Differences among implementations impact the program's ability to use graphical features that are based on 3D polygons, the user's ability to manipulate the graphical displays, and the user's ability to obtain alternate forms of output. The UNIX/DISSPLA implementation of PLOT3D supports 2-D polygons as

  13. Recurrence plots revisited

    NASA Astrophysics Data System (ADS)

    Casdagli, M. C.

    1997-09-01

    We show that recurrence plots (RPs) give detailed characterizations of time series generated by dynamical systems driven by slowly varying external forces. For deterministic systems we show that RPs of the time series can be used to reconstruct the RP of the driving force if it varies sufficiently slowly. If the driving force is one-dimensional, its functional form can then be inferred up to an invertible coordinate transformation. The same results hold for stochastic systems if the RP of the time series is suitably averaged and transformed. These results are used to investigate the nonlinear prediction of time series generated by dynamical systems driven by slowly varying external forces. We also consider the problem of detecting a small change in the driving force, and propose a surrogate data technique for assessing statistical significance. Numerically simulated time series and a time series of respiration rates recorded from a subject with sleep apnea are used as illustrative examples.

  14. Wavelet Representation of Contour Sets

    SciTech Connect

    Bertram, M; Laney, D E; Duchaineau, M A; Hansen, C D; Hamann, B; Joy, K I

    2001-07-19

    We present a new wavelet compression and multiresolution modeling approach for sets of contours (level sets). In contrast to previous wavelet schemes, our algorithm creates a parametrization of a scalar field induced by its contoum and compactly stores this parametrization rather than function values sampled on a regular grid. Our representation is based on hierarchical polygon meshes with subdivision connectivity whose vertices are transformed into wavelet coefficients. From this sparse set of coefficients, every set of contours can be efficiently reconstructed at multiple levels of resolution. When applying lossy compression, introducing high quantization errors, our method preserves contour topology, in contrast to compression methods applied to the corresponding field function. We provide numerical results for scalar fields defined on planar domains. Our approach generalizes to volumetric domains, time-varying contours, and level sets of vector fields.

  15. Non-contact contour gage

    DOEpatents

    Bieg, Lothar F.

    1990-12-18

    A fluid probe for measuring the surface contour of a machined part is provided whereby the machined part can remain on the machining apparatus during surface contour measurement. A measuring nozzle in a measuring probe directs a measuring fluid flow onto the surface. The measuring nozzle is on the probe situated midway between two guide nozzles that direct guide fluid flows onto the surface. When the guide fluid flows interact with the surface, they cause the measuring flow and measuring probe to be oriented perpendicular to the surface. The measuring probe includes a pressure chamber whose pressure is monitored. As the measuring fluid flow encounters changes in surface contour, pressure changes occur in the pressure chamber. The surface contour is represented as data corresponding to pressure changes in the pressure chamber as the surface is scanned.

  16. Using Lateral Coupled Snakes for Modeling the Contours of Worms

    NASA Astrophysics Data System (ADS)

    Wang, Qing; Ronneberger, Olaf; Schulze, Ekkehard; Baumeister, Ralf; Burkhardt, Hans

    A model called lateral coupled snakes is proposed to describe the contours of moving C. elegans worms on 2D images with high accuracy. The model comprises two curves with point correspondence between them. The line linking a corresponding pair is approximately perpendicular to the curves at the two points, which is ensured by shear restoring forces. Experimental proofs reveal that the model is a promising tool for locating and segmenting worms or objects with similar shapes.

  17. NOTE: A software tool for 2D/3D visualization and analysis of phase-space data generated by Monte Carlo modelling of medical linear accelerators

    NASA Astrophysics Data System (ADS)

    Neicu, Toni; Aljarrah, Khaled M.; Jiang, Steve B.

    2005-10-01

    A computer program has been developed for novel 2D/3D visualization and analysis of the phase-space parameters of Monte Carlo simulations of medical accelerator radiation beams. The software is written in the IDL language and reads the phase-space data generated in the BEAMnrc/BEAM Monte Carlo code format. Contour and colour-wash plots of the fluence, mean energy, energy fluence, mean angle, spectra distribution, energy fluence distribution, angular distribution, and slices and projections of the 3D ZLAST distribution can be calculated and displayed. Based on our experience of using it at Massachusetts General Hospital, the software has proven to be a useful tool for analysis and verification of the Monte Carlo generated phase-space files. The software is in the public domain.

  18. Contour-Based Surface Reconstruction using MPU Implicit Models.

    PubMed

    Braude, Ilya; Marker, Jeffrey; Museth, Ken; Nissanov, Jonathan; Breen, David

    2007-03-01

    This paper presents a technique for creating a smooth, closed surface from a set of 2D contours, which have been extracted from a 3D scan. The technique interprets the pixels that make up the contours as points in ℝ(3) and employs Multi-level Partition of Unity (MPU) implicit models to create a surface that approximately fits to the 3D points. Since MPU implicit models additionally require surface normal information at each point, an algorithm that estimates normals from the contour data is also described. Contour data frequently contains noise from the scanning and delineation process. MPU implicit models provide a superior approach to the problem of contour-based surface reconstruction, especially in the presence of noise, because they are based on adaptive implicit functions that locally approximate the points within a controllable error bound. We demonstrate the effectiveness of our technique with a number of example datasets, providing images and error statistics generated from our results. PMID:18496609

  19. PlotStuff: A class for plotting stuff from overture based on: GL{underscore}GraphicsInterface: A graphics interface based on OpenGL based on: GenericGraphicsInterface: A generic graphics interface: User guide, Version 1.00

    SciTech Connect

    Henshaw, B.

    1996-10-16

    {bold PlotStuff} can be used to interactively plot objects from Overture such as mappings, grids and grid functions. PlotStuff can be used to plot contours, surfaces, streamlines and grids. It can also be used to plot one-dimensional line plots. {bold GL{emdash}GraphicsInterface} is a class (from which PlotStuff is derived) that implements some standard plotting functions using OpenGL. {bold GL{emdash}Graphicslnterface} is itself derived from the class GenericGraphicsInterface which defines some standard plotting functions that are independent of any particular graphics package.

  20. Prostate segmentation algorithm using dyadic wavelet transform and discrete dynamic contour

    NASA Astrophysics Data System (ADS)

    Chiu, Bernard; Freeman, George H.; Salama, M. M. A.; Fenster, Aaron

    2004-11-01

    Knowing the location and the volume of the prostate is important for ultrasound-guided prostate brachytherapy, a commonly used prostate cancer treatment method. The prostate boundary must be segmented before a dose plan can be obtained. However, manual segmentation is arduous and time consuming. This paper introduces a semi-automatic segmentation algorithm based on the dyadic wavelet transform (DWT) and the discrete dynamic contour (DDC). A spline interpolation method is used to determine the initial contour based on four user-defined initial points. The DDC model then refines the initial contour based on the approximate coefficients and the wavelet coefficients generated using the DWT. The DDC model is executed under two settings. The coefficients used in these two settings are derived using smoothing functions with different sizes. A selection rule is used to choose the best contour based on the contours produced in these two settings. The accuracy of the final contour produced by the proposed algorithm is evaluated by comparing it with the manual contour outlined by an expert observer. A total of 114 2D TRUS images taken for six different patients scheduled for brachytherapy were segmented using the proposed algorithm. The average difference between the contour segmented using the proposed algorithm and the manually outlined contour is less than 3 pixels.

  1. Prostate segmentation algorithm using dyadic wavelet transform and discrete dynamic contour.

    PubMed

    Chiu, Bernard; Freeman, George H; Salama, M M A; Fenster, Aaron

    2004-11-01

    Knowing the location and the volume of the prostate is important for ultrasound-guided prostate brachytherapy, a commonly used prostate cancer treatment method. The prostate boundary must be segmented before a dose plan can be obtained. However, manual segmentation is arduous and time consuming. This paper introduces a semi-automatic segmentation algorithm based on the dyadic wavelet transform (DWT) and the discrete dynamic contour (DDC). A spline interpolation method is used to determine the initial contour based on four user-defined initial points. The DDC model then refines the initial contour based on the approximate coefficients and the wavelet coefficients generated using the DWT. The DDC model is executed under two settings. The coefficients used in these two settings are derived using smoothing functions with different sizes. A selection rule is used to choose the best contour based on the contours produced in these two settings. The accuracy of the final contour produced by the proposed algorithm is evaluated by comparing it with the manual contour outlined by an expert observer. A total of 114 2D TRUS images taken for six different patients scheduled for brachytherapy were segmented using the proposed algorithm. The average difference between the contour segmented using the proposed algorithm and the manually outlined contour is less than 3 pixels. PMID:15584529

  2. Entropy reduction via simplified image contourization

    NASA Technical Reports Server (NTRS)

    Turner, Martin J.

    1993-01-01

    The process of contourization is presented which converts a raster image into a set of plateaux or contours. These contours can be grouped into a hierarchical structure, defining total spatial inclusion, called a contour tree. A contour coder has been developed which fully describes these contours in a compact and efficient manner and is the basis for an image compression method. Simplification of the contour tree has been undertaken by merging contour tree nodes thus lowering the contour tree's entropy. This can be exploited by the contour coder to increase the image compression ratio. By applying general and simple rules derived from physiological experiments on the human vision system, lossy image compression can be achieved which minimizes noticeable artifacts in the simplified image.

  3. Plotting and Scheming

    NASA Technical Reports Server (NTRS)

    2004-01-01

    [figure removed for brevity, see original site] Figure 1 [figure removed for brevity, see original site] Figure 2 Click for larger view

    These two graphics are planning tools used by Mars Exploration Rover engineers to plot and scheme the perfect location to place the rock abrasion tool on the rock collection dubbed 'El Capitan' near Opportunity's landing site. 'El Capitan' is located within a larger outcrop nicknamed 'Opportunity Ledge.'

    The rover visualization team from NASA Ames Research Center, Moffett Field, Calif., initiated the graphics by putting two panoramic camera images of the 'El Capitan' area into their three-dimensional model. The rock abrasion tool team from Honeybee Robotics then used the visualization tool to help target and orient their instrument on the safest and most scientifically interesting locations. The blue circle represents one of two current targets of interest, chosen because of its size, lack of dust, and most of all its distinct and intriguing geologic features. To see the second target location, see the image titled 'Plotting and Scheming.'

    The rock abrasion tool is sensitive to the shape and texture of a rock, and must safely sit within the 'footprint' indicated by the blue circles. The rock area must be large enough to fit the contact sensor and grounding mechanism within the area of the outer blue circle, and the rock must be smooth enough to get an even grind within the abrasion area of the inner blue circle. If the rock abrasion tool were not grounded by its support mechanism or if the surface were uneven, it could 'run away' from its target. The rock abrasion tool is location on the rover's instrument deployment device, or arm.

    Over the next few martian days, or sols, the rover team will use these and newer, similar graphics created with more recent, higher-resolution panoramic camera images and super-spectral data from the miniature thermal emission spectrometer. These data will be used to pick the best

  4. AnisWave 2D

    2004-08-01

    AnisWave2D is a 2D finite-difference code for a simulating seismic wave propagation in fully anisotropic materials. The code is implemented to run in parallel over multiple processors and is fully portable. A mesh refinement algorithm has been utilized to allow the grid-spacing to be tailored to the velocity model, avoiding the over-sampling of high-velocity materials that usually occurs in fixed-grid schemes.

  5. GnuForPlot Graphics

    2015-11-04

    Gnuforplot Graphics is a Fortran90 program designed to generate two and three dimensional plots of data on a personal computer. The program uses calls to the open source code Gnuplot to generate the plots. Two Fortran90 programs have been written to use the Gnuplot graphics capabilities. The first program, named Plotsetup.f90 reads data from output files created by either the Stadium or LeachXS/Orchestra modeling codes and saves the data in arrays for plotting. This programmore » then calls Gnuforplot which takes the data array along with user specified parameters to set plot specifications and issues Gnuplot commands that generate the screen plots. The user can view the plots and optionally save copies in jpeg format.« less

  6. GnuForPlot Graphics

    SciTech Connect

    2015-11-04

    Gnuforplot Graphics is a Fortran90 program designed to generate two and three dimensional plots of data on a personal computer. The program uses calls to the open source code Gnuplot to generate the plots. Two Fortran90 programs have been written to use the Gnuplot graphics capabilities. The first program, named Plotsetup.f90 reads data from output files created by either the Stadium or LeachXS/Orchestra modeling codes and saves the data in arrays for plotting. This program then calls Gnuforplot which takes the data array along with user specified parameters to set plot specifications and issues Gnuplot commands that generate the screen plots. The user can view the plots and optionally save copies in jpeg format.

  7. Enabling scanning electron microscope contour-based optical proximity correction models

    NASA Astrophysics Data System (ADS)

    Weisbuch, François; Jantzen, Kenneth

    2015-04-01

    A scanning electron microscope (SEM) is the metrology tool used to accurately characterize very fine structures on wafers, usually by extracting one critical dimension (CD) per SEM image. This approach for optical proximity correction (OPC) modeling requires many measurements resulting in a lengthy cycle time for data collection, review, and cleaning, and faces reliability issues when dealing with critical two-dimensional (2-D) structures. An alternative to CD-based metrology is to use SEM image contours for OPC modeling. To calibrate OPC models with contours, reliable contours matched to traditional CD-SEM measurements are required along with a method to choose structure and site selections (number, type, and image space coverage) specific to a contour-based OPC model calibration. The potential of SEM contour model-based calibration is illustrated by comparing two contour-based models to reference models, one empirical model and a second rigorous simulation-based model. The contour-based models are as good as or better than a CD-based model with a significant advantage in the prediction of complex 2-D configurations with a reduced metrology work load.

  8. General purpose film plotting system

    NASA Technical Reports Server (NTRS)

    Mcquillan, C.

    1977-01-01

    The general purpose film plotting system which is a plot program design to handle a majority of the data tape formats presently available under OS/360 was discussed. The convenience of this program is due to the fact that the user merely describes the format of his data set and the type of data plots he desires. It processes the input data according to the given specifications. The output is generated on a tape which yields data plots when processed by the selected plotter. A summary of each job is produced on the printer.

  9. Topological Cacti: Visualizing Contour-based Statistics

    SciTech Connect

    Weber, Gunther H.; Bremer, Peer-Timo; Pascucci, Valerio

    2011-05-26

    Contours, the connected components of level sets, play an important role in understanding the global structure of a scalar field. In particular their nestingbehavior and topology-often represented in form of a contour tree-have been used extensively for visualization and analysis. However, traditional contour trees onlyencode structural properties like number of contours or the nesting of contours, but little quantitative information such as volume or other statistics. Here we use thesegmentation implied by a contour tree to compute a large number of per-contour (interval) based statistics of both the function defining the contour tree as well asother co-located functions. We introduce a new visual metaphor for contour trees, called topological cacti, that extends the traditional toporrery display of acontour tree to display additional quantitative information as width of the cactus trunk and length of its spikes. We apply the new technique to scalar fields ofvarying dimension and different measures to demonstrate the effectiveness of the approach.

  10. Two-dimensional correlation analysis and waterfall plots for detecting positional fluctuations of spectral changes.

    PubMed

    Ryu, Soo Ryeon; Noda, Isao; Lee, Chang-Hee; Lee, Phil Ho; Hwang, Hyonseok; Jung, Young Mee

    2011-04-01

    In this study, we demonstrate the potentials and pitfalls of using various waterfall plots, such as conventional waterfall plots, two-dimensional (2D) gradient maps, moving window two-dimensional analysis (MW2D), perturbation-correlation moving window two-dimensional analysis (PCMW2D), and moving window principal component analysis two-dimensional correlation analysis (MWPCA2D), in the detection of the existence of band position shifts. Waterfall plots of the simulated spectral datasets are compared with conventional 2D correlation spectra. Different waterfall plots give different features in differentiating the behaviors of frequency shift versus two overlapped bands. Two-dimensional correlation spectra clearly show the very characteristic cluster pattern for both band position shifts and two overlapped bands. The vivid pattern differences are readily detectable in various waterfalls plots. Various types of waterfall plots of temperature-dependent infrared (IR) spectra of ethylene glycol, which does not have the actual band shift but only two overlapped bands, and of Fourier transform infrared (FT-IR) spectra of 2 wt% acetone in a mixed solvent of CHCl(3)/CCl(4) demonstrate that waterfall plots are not able to unambiguously detect the difference between real band shift and two overlapped bands. Thus, the presence or lack of the asynchronous 2D butterfly pattern seems like the most effective diagnostic tool for band shift detection. PMID:21396181

  11. MULTISCALE DISCRETIZATION OF SHAPE CONTOURS

    SciTech Connect

    Prasad, L.; Rao, R.

    2000-09-01

    We present an efficient multi-scale scheme to adaptively approximate the continuous (or densely sampled) contour of a planar shape at varying resolutions. The notion of shape is intimately related to the notion of contour, and the efficient representation of the contour of a shape is vital to a computational understanding of the shape. Any polygonal approximation of a planar smooth curve is equivalent to a piecewise constant approximation of the parameterized X and Y coordinate functions of a discrete point set obtained by densely sampling the curve. Using the Haar wavelet transform for the piecewise approximation yields a hierarchical scheme in which the size of the approximating point set is traded off against the morphological accuracy of the approximation. Our algorithm compresses the representation of the initial shape contour to a sparse sequence of points in the plane defining the vertices of the shape's polygonal approximation. Furthermore, it is possible to control the overall resolution of the approximation by a single, scale-independent parameter.

  12. Gage for 3-d contours

    NASA Technical Reports Server (NTRS)

    Haynie, C. C.

    1980-01-01

    Simple gage, used with template, can help inspectors determine whether three-dimensional curved surface has correct contour. Gage was developed as aid in explosive forming of Space Shuttle emergency-escape hatch. For even greater accuracy, wedge can be made of metal and calibrated by indexing machine.

  13. Box-and-Whisker Plots.

    ERIC Educational Resources Information Center

    Larsen, Russell D.

    1985-01-01

    Box-and-whisker plots (which give rapid visualization of batches of data) can be effectively used to present diverse collections of data used in traditional first-year chemistry courses. Construction of box-and-whisker plots and their use with bond energy data and data on heats of formation and solution are discussed. (JN)

  14. A contoured continuum surface force model for particle methods

    NASA Astrophysics Data System (ADS)

    Duan, Guangtao; Koshizuka, Seiichi; Chen, Bin

    2015-10-01

    A surface tension model is essential to simulate multiphase flows with deformed interfaces. This study develops a contoured continuum surface force (CCSF) model for particle methods. A color function that varies sharply across the interface to mark different fluid phases is smoothed in the transition region, where the local contour curvature can be regarded as the interface curvature. The local contour passing through each reference particle in the transition region is extracted from the local profile of the smoothed color function. The local contour curvature is calculated based on the Taylor series expansion of the smoothed color function, whose derivatives are calculated accurately according to the definition of the smoothed color function. Two schemes are proposed to specify the smooth radius: fixed scheme, where 2 ×re (re = particle interaction radius) is assigned to all particles in the transition region; and varied scheme, where re and 2 ×re are assigned to the central and edged particles in the transition region respectively. Numerical examples, including curvature calculation for static circle and ellipse interfaces, deformation of square droplet to a circle (2D and 3D), droplet deformation in shear flow, and droplet coalescence, are simulated to verify the CCSF model and compare its performance with those of other methods. The CCSF model with the fixed scheme is proven to produce the most accurate curvature and lowest parasitic currents among the tested methods.

  15. CMOS image sensor with contour enhancement

    NASA Astrophysics Data System (ADS)

    Meng, Liya; Lai, Xiaofeng; Chen, Kun; Yuan, Xianghui

    2010-10-01

    Imitating the signal acquisition and processing of vertebrate retina, a CMOS image sensor with bionic pre-processing circuit is designed. Integration of signal-process circuit on-chip can reduce the requirement of bandwidth and precision of the subsequent interface circuit, and simplify the design of the computer-vision system. This signal pre-processing circuit consists of adaptive photoreceptor, spatial filtering resistive network and Op-Amp calculation circuit. The adaptive photoreceptor unit with a dynamic range of approximately 100 dB has a good self-adaptability for the transient changes in light intensity instead of intensity level itself. Spatial low-pass filtering resistive network used to mimic the function of horizontal cell, is composed of the horizontal resistor (HRES) circuit and OTA (Operational Transconductance Amplifier) circuit. HRES circuit, imitating dendrite of the neuron cell, comprises of two series MOS transistors operated in weak inversion region. Appending two diode-connected n-channel transistors to a simple transconductance amplifier forms the OTA Op-Amp circuit, which provides stable bias voltage for the gate of MOS transistors in HRES circuit, while serves as an OTA voltage follower to provide input voltage for the network nodes. The Op-Amp calculation circuit with a simple two-stage Op-Amp achieves the image contour enhancing. By adjusting the bias voltage of the resistive network, the smoothing effect can be tuned to change the effect of image's contour enhancement. Simulations of cell circuit and 16×16 2D circuit array are implemented using CSMC 0.5μm DPTM CMOS process.

  16. Map_plot and bgg_plot: software for integration of geoscience datasets

    NASA Astrophysics Data System (ADS)

    Gaillot, Philippe; Punongbayan, Jane T.; Rea, Brice

    2004-02-01

    Since 1985, the Ocean Drilling Program (ODP) has been supporting multidisciplinary research in exploring the structure and history of Earth beneath the oceans. After more than 200 Legs, complementary datasets covering different geological environments, periods and space scales have been obtained and distributed world-wide using the ODP-Janus and Lamont Doherty Earth Observatory-Borehole Research Group (LDEO-BRG) database servers. In Earth Sciences, more than in any other science, the ensemble of these data is characterized by heterogeneous formats and graphical representation modes. In order to fully and quickly assess this information, a set of Unix/Linux and Generic Mapping Tool-based C programs has been designed to convert and integrate datasets acquired during the present ODP and the future Integrated ODP (IODP) Legs. Using ODP Leg 199 datasets, we show examples of the capabilities of the proposed programs. The program map_plot is used to easily display datasets onto 2-D maps. The program bgg_plot (borehole geology and geophysics plot) displays data with respect to depth and/or time. The latter program includes depth shifting, filtering and plotting of core summary information, continuous and discrete-sample core measurements (e.g. physical properties, geochemistry, etc.), in situ continuous logs, magneto- and bio-stratigraphies, specific sedimentological analyses (lithology, grain size, texture, porosity, etc.), as well as core and borehole wall images. Outputs from both programs are initially produced in PostScript format that can be easily converted to Portable Document Format (PDF) or standard image formats (GIF, JPEG, etc.) using widely distributed conversion programs. Based on command line operations and customization of parameter files, these programs can be included in other shell- or database-scripts, automating plotting procedures of data requests. As an open source software, these programs can be customized and interfaced to fulfill any specific

  17. S2PLOT: Three-dimensional (3D) Plotting Library

    NASA Astrophysics Data System (ADS)

    Barnes, D. G.; Fluke, C. J.; Bourke, P. D.; Parry, O. T.

    2011-03-01

    We present a new, three-dimensional (3D) plotting library with advanced features, and support for standard and enhanced display devices. The library - S2PLOT - is written in C and can be used by C, C++ and FORTRAN programs on GNU/Linux and Apple/OSX systems. S2PLOT draws objects in a 3D (x,y,z) Cartesian space and the user interactively controls how this space is rendered at run time. With a PGPLOT inspired interface, S2PLOT provides astronomers with elegant techniques for displaying and exploring 3D data sets directly from their program code, and the potential to use stereoscopic and dome display devices. The S2PLOT architecture supports dynamic geometry and can be used to plot time-evolving data sets, such as might be produced by simulation codes. In this paper, we introduce S2PLOT to the astronomical community, describe its potential applications, and present some example uses of the library.

  18. PLOT3D user's manual

    NASA Technical Reports Server (NTRS)

    Walatka, Pamela P.; Buning, Pieter G.; Pierce, Larry; Elson, Patricia A.

    1990-01-01

    PLOT3D is a computer graphics program designed to visualize the grids and solutions of computational fluid dynamics. Seventy-four functions are available. Versions are available for many systems. PLOT3D can handle multiple grids with a million or more grid points, and can produce varieties of model renderings, such as wireframe or flat shaded. Output from PLOT3D can be used in animation programs. The first part of this manual is a tutorial that takes the reader, keystroke by keystroke, through a PLOT3D session. The second part of the manual contains reference chapters, including the helpfile, data file formats, advice on changing PLOT3D, and sample command files.

  19. Differential contribution of early visual areas to the perceptual process of contour processing.

    PubMed

    Schira, Mark M; Fahle, Manfred; Donner, Tobias H; Kraft, Antje; Brandt, Stephan A

    2004-04-01

    We investigated contour processing and figure-ground detection within human retinotopic areas using event-related functional magnetic resonance imaging (fMRI) in 6 healthy and naïve subjects. A figure (6 degrees side length) was created by a 2nd-order texture contour. An independent and demanding foveal letter-discrimination task prevented subjects from noticing this more peripheral contour stimulus. The contour subdivided our stimulus into a figure and a ground. Using localizers and retinotopic mapping stimuli we were able to subdivide each early visual area into 3 eccentricity regions corresponding to 1) the central figure, 2) the area along the contour, and 3) the background. In these subregions we investigated the hemodynamic responses to our stimuli and compared responses with or without the contour defining the figure. No contour-related blood oxygenation level-dependent modulation in early visual areas V1, V3, VP, and MT+ was found. Significant signal modulation in the contour subregions of V2v, V2d, V3a, and LO occurred. This activation pattern was different from comparable studies, which might be attributable to the letter-discrimination task reducing confounding attentional modulation. In V3a, but not in any other retinotopic area, signal modulation corresponding to the central figure could be detected. Such contextual modulation will be discussed in light of the recurrent processing hypothesis and the role of visual awareness. PMID:14668291

  20. Stacking up 2D materials

    NASA Astrophysics Data System (ADS)

    Mayor, Louise

    2016-05-01

    Graphene might be the most famous example, but there are other 2D materials and compounds too. Louise Mayor explains how these atomically thin sheets can be layered together to create flexible “van der Waals heterostructures”, which could lead to a range of novel applications.

  1. Hybrid OPC modeling with SEM contour technique for 10nm node process

    NASA Astrophysics Data System (ADS)

    Hitomi, Keiichiro; Halle, Scott; Miller, Marshal; Graur, Ioana; Saulnier, Nicole; Dunn, Derren; Okai, Nobuhiro; Hotta, Shoji; Yamaguchi, Atsuko; Komuro, Hitoshi; Ishimoto, Toru; Koshihara, Shunsuke; Hojo, Yutaka

    2014-03-01

    Hybrid OPC modeling is investigated using both CDs from 1D and simple 2D structures and contours extracted from complex 2D structures, which are obtained by a Critical Dimension-Scanning Electron Microscope (CD-SEM). Recent studies have addressed some of key issues needed for the implementation of contour extraction, including an edge detection algorithm consistent with conventional CD measurements, contour averaging and contour alignment. Firstly, pattern contours obtained from CD-SEM images were used to complement traditional site driven CD metrology for the calibration of OPC models for both metal and contact layers of 10 nm-node logic device, developed in Albany Nano-Tech. The accuracy of hybrid OPC model was compared with that of conventional OPC model, which was created with only CD data. Accuracy of the model, defined as total error root-mean-square (RMS), was improved by 23% with the use of hybrid OPC modeling for contact layer and 18% for metal layer, respectively. Pattern specific benefit of hybrid modeling was also examined. Resist shrink correction was applied to contours extracted from CD-SEM images in order to improve accuracy of the contours, and shrink corrected contours were used for OPC modeling. The accuracy of OPC model with shrink correction was compared with that without shrink correction, and total error RMS was decreased by 0.2nm (12%) with shrink correction technique. Variation of model accuracy among 8 modeling runs with different model calibration patterns was reduced by applying shrink correction. The shrink correction of contours can improve accuracy and stability of OPC model.

  2. SEM-contour shape analysis method for advanced semiconductor devices

    NASA Astrophysics Data System (ADS)

    Toyoda, Yasutaka; Shindo, Hiroyuki; Ota, Yoshihiro; Matsuoka, Ryoichi; Hojo, Yutaka; Fuchimoto, Daisuke; Hibino, Daisuke; Sakai, Hideo

    2013-04-01

    The new measuring method that we developed executes a contour shape analysis that is based on the pattern edge information from a SEM image. This analysis helps to create a highly precise quantification of every circuit pattern shape by comparing the contour extracted from the SEM image using a CD measurement algorithm and the ideal circuit pattern. The developed method, in the next phase, can generate four shape indices by using the analysis mass measurement data. When the shape index measured using the developed method is compared the CD, the difference of the shape index and the CD is negligibly small for the quantification of the circuit pattern shape. In addition, when the 2D patterns on a FEM wafer are measured using the developed method, the tendency for shape deformations is precisely caught by the four shape indices. This new method and the evaluation results will be presented in detail in this paper.

  3. Adjusting the Contour of Reflector Panels

    NASA Technical Reports Server (NTRS)

    Palmer, W. B.; Giebler, M. M.

    1984-01-01

    Postfabrication adjustment of contour of panels for reflector, such as parabolic reflector for radio antennas, possible with simple mechanism consisting of threaded stud, two nuts, and flexure. Contours adjusted manually.

  4. Contoured Surface Eddy Current Inspection System

    DOEpatents

    Batzinger, Thomas James; Fulton, James Paul; Rose, Curtis Wayne; Perocchi, Lee Cranford

    2003-04-08

    Eddy current inspection of a contoured surface of a workpiece is performed by forming a backing piece of flexible, resiliently yieldable material with a contoured exterior surface conforming in shape to the workpiece contoured surface. The backing piece is preferably cast in place so as to conform to the workpiece contoured surface. A flexible eddy current array probe is attached to the contoured exterior surface of the backing piece such that the probe faces the contoured surface of the workpiece to be inspected when the backing piece is disposed adjacent to the workpiece. The backing piece is then expanded volumetrically by inserting at least one shim into a slot in the backing piece to provide sufficient contact pressure between the probe and the workpiece contoured surface to enable the inspection of the workpiece contoured surface to be performed.

  5. CFD Extraction Tool for TecPlot From DPLR Solutions

    NASA Technical Reports Server (NTRS)

    Norman, David

    2013-01-01

    This invention is a TecPlot macro of a computer program in the TecPlot programming language that processes data from DPLR solutions in TecPlot format. DPLR (Data-Parallel Line Relaxation) is a NASA computational fluid dynamics (CFD) code, and TecPlot is a commercial CFD post-processing tool. The Tec- Plot data is in SI units (same as DPLR output). The invention converts the SI units into British units. The macro modifies the TecPlot data with unit conversions, and adds some extra calculations. After unit conversions, the macro cuts a slice, and adds vectors on the current plot for output format. The macro can also process surface solutions. Existing solutions use manual conversion and superposition. The conversion is complicated because it must be applied to a range of inter-related scalars and vectors to describe a 2D or 3D flow field. It processes the CFD solution to create superposition/comparison of scalars and vectors. The existing manual solution is cumbersome, open to errors, slow, and cannot be inserted into an automated process. This invention is quick and easy to use, and can be inserted into an automated data-processing algorithm.

  6. Doubly rotated contoured quartz resonators.

    PubMed

    Sinha, B K

    2001-09-01

    Doubly rotated contoured quartz resonators are used in the design of temperature-compensated stable clocks and dual-mode sensors for simultaneous measurements of pressure and temperature. The design of these devices is facilitated by models that can predict frequency spectra associated with the three thickness modes and temperature and stress-induced frequency changes as a function of crystalline orientation. The Stevens-Tiersten technique for the analysis of the C-mode of a doubly rotated contoured quartz resonator is extended to include the other two thickness modes. Computational results for harmonic and anharmonic overtones of all three thickness modes of such resonators help in optimizing the radius of curvature of the contour and electrode shape for suppression of unwanted modes and prevention of activity dips. The temperature and stress-induced changes in thickness-mode resonator frequencies are calculated from a perturbation technique for small dynamic fields superposed on a static bias. The static bias refers to either a temperature or stress-induced static deformation of the resonator plate. Phenomenological models are also used for calculating the temperature and stress-induced changes in resonant frequencies as a function of crystalline orientation. Results for the SBTC-cut quartz plate with a spherical convex contour of 260 mm indicate that normal trapping occurs for the third (n = 3) and fifth (n = 5) harmonic of the A-mode, the fundamental (n = 1) and third (n = 3) harmonic of the B-mode, and the fundamental (n = 1) and fifth (n = 5) harmonic of the C-mode. PMID:11570746

  7. Numerical computation of Pop plot

    SciTech Connect

    Menikoff, Ralph

    2015-03-23

    The Pop plot — distance-of-run to detonation versus initial shock pressure — is a key characterization of shock initiation in a heterogeneous explosive. Reactive burn models for high explosives (HE) must reproduce the experimental Pop plot to have any chance of accurately predicting shock initiation phenomena. This report describes a methodology for automating the computation of a Pop plot for a specific explosive with a given HE model. Illustrative examples of the computation are shown for PBX 9502 with three burn models (SURF, WSD and Forest Fire) utilizing the xRage code, which is the Eulerian ASC hydrocode at LANL. Comparison of the numerical and experimental Pop plot can be the basis for a validation test or as an aid in calibrating the burn rate of an HE model. Issues with calibration are discussed.

  8. Intonation contour in synchronous speech

    NASA Astrophysics Data System (ADS)

    Wang, Bei; Cummins, Fred

    2003-10-01

    Synchronous Speech (Syn-S), obtained by having pairs of speakers read a prepared text together, has been shown to result in interesting properties in the temporal domain, especially in the reduction of inter-speaker variability in supersegmental timing [F. Cummins, ARLO 3, 7-11 (2002)]. Here we investigate the effect of synchronization among speakers on the intonation contour, with a view to informing models of intonation. Six pairs of speakers (all females) read a short text (176 words) both synchronously and solo. Results show that (1) the pitch accent height above a declining baseline is reduced in Syn-S, compared with solo speech, while the pitch accent location is consistent across speakers in both conditions; (2) in contrast to previous findings on duration matching, there is an asymmetry between speakers, with one speaker exerting a stronger influence on the observed intonation contour than the other; (3) agreement on the boundaries of intonational phrases is greater in Syn-S and intonation contours are well matched from the first syllable of the phrase and throughout.

  9. ODP-PLOT and MAP-PLOT: Software for integration of geosciences data set

    NASA Astrophysics Data System (ADS)

    Gaillot, P.

    2002-12-01

    Since 17 years, Ocean Drilling Program (ODP) supports multidisciplinary researches to explore the structure and history of Earth beneath the oceans. After more than 200 Legs, complementary data sets covering different time and space scales have been obtained and distributed world-wide using ODP-Janus and LDEO-BRG data base servers. In Earth Sciences, more than any other science, the ensemble of these data is characterized by heterogeneous format and graphical representation mode. In order to fully and quickly put value into this information, we present a set of Unix/Linux-based C programs for conversion and integration of data sets acquired during ODP legs. Using Leg 199 datasets, we show examples of the capabilities of these programs. ODP-PLOT displays data with respect to depth and/or time. The program includes depth-time shifting, filtering and plotting of core summary, analysis (structure) and measurements (physical properties, geochemistry ...) of samples, in-situ continuous logs, magneto- and bio-stratigraphy, specific sediment analysis (lithology, grain size, texture, porosity...), core and borehole wall images. MAP-PLOT is used to easily display datasets onto 2-D maps. Outputs of both programs can be in post-script (ps), portable document format (pdf) or standard image format (GIF, JPEG, ...). Based on command line operations and customization of parameter files, these programs can be included in other Shell- or database- scripts, automating plotting procedures of data request. As an open source software, these programs can be customized to answer any specific plotting need.

  10. What is in a contour map? A region-based logical formalization of contour semantics

    USGS Publications Warehouse

    Usery, E. Lynn; Hahmann, Torsten

    2015-01-01

    This paper analyses and formalizes contour semantics in a first-order logic ontology that forms the basis for enabling computational common sense reasoning about contour information. The elicited contour semantics comprises four key concepts – contour regions, contour lines, contour values, and contour sets – and their subclasses and associated relations, which are grounded in an existing qualitative spatial ontology. All concepts and relations are illustrated and motivated by physical-geographic features identifiable on topographic contour maps. The encoding of the semantics of contour concepts in first-order logic and a derived conceptual model as basis for an OWL ontology lay the foundation for fully automated, semantically-aware qualitative and quantitative reasoning about contours.

  11. Multi-object geodesic active contours (MOGAC).

    PubMed

    Lucas, Blake C; Kazhdan, Michael; Taylor, Russell H

    2012-01-01

    An emerging topic is to build image segmentation systems that can segment hundreds to thousands of objects (i.e. cell segmentation\\tracking, full brain parcellation, full body segmentation, etc.). Multi-object Level Set Methods (MLSM) perform this task with the benefit of sub-pixel precision. However, current implementations of MLSM are not as computationally or memory efficient as their region growing and graph cut counterparts which lack sub-pixel precision. To address this performance gap, we present a novel parallel implementation of MLSM that leverages the sparse properties of the algorithm to minimize its memory footprint for multiple objects. The new method, Multi-Object Geodesic Active Contours (MOGAC), can represent N objects with just two functions: a label mask image and unsigned distance field. The time complexity of the algorithm is shown to be O((M (power)d)/P) for M (power)d pixels and P processing units in dimension d = {2,3}, independent of the number of objects. Results are presented for 2D and 3D image segmentation problems. PMID:23286074

  12. Mouse Ability to Perceive Subjective Contours.

    PubMed

    Okuyama-Uchimura, Fumi; Komai, Shoji

    2016-03-01

    In contrast to the previously held notion that mice have a weak visual system, it is now generally accepted that mice can perceive rather complicated figures in various contexts such as in cognitive experiments and in social settings. Here, we show that mice could even be capable of perceiving a visual illusion--subjective contours. This illusion requires the visual system to compensate for a lack of visual information in compressed 2D images on the retina. In this experiment, we trained mice to respond appropriately to a rectangle-shaped rewarded figure of specific orientation in a two-choice visual discrimination task with a touchscreen monitor. In Transfer Test 1, mice could discriminate illusory rectangle-shaped figures significantly as compared with a figure, which did not induce illusory figures. In Transfer Test 2, the choice rate of targets decreased with imperfect illusory figures, which produced weak perception of rotated or deficient inducers. Moreover, in Transfer Test 3, mice could not discriminate the low-resolution illusory figure, which also induced weak perception. These results demonstrated the possibility that mice might be useful for investigating fundamental properties of the neural visual system. PMID:26562875

  13. Contours identification of elements in a cone beam computed tomography for investigating maxillary cysts

    NASA Astrophysics Data System (ADS)

    Chioran, Doina; Nicoarǎ, Adrian; Roşu, Şerban; Cǎrligeriu, Virgil; Ianeş, Emilia

    2013-10-01

    Digital processing of two-dimensional cone beam computer tomography slicesstarts by identification of the contour of elements within. This paper deals with the collective work of specialists in medicine and applied mathematics in computer science on elaborating and implementation of algorithms in dental 2D imagery.

  14. Nanoimprint lithography: 2D or not 2D? A review

    NASA Astrophysics Data System (ADS)

    Schift, Helmut

    2015-11-01

    Nanoimprint lithography (NIL) is more than a planar high-end technology for the patterning of wafer-like substrates. It is essentially a 3D process, because it replicates various stamp topographies by 3D displacement of material and takes advantage of the bending of stamps while the mold cavities are filled. But at the same time, it keeps all assets of a 2D technique being able to pattern thin masking layers like in photon- and electron-based traditional lithography. This review reports about 20 years of development of replication techniques at Paul Scherrer Institut, with a focus on 3D aspects of molding, which enable NIL to stay 2D, but at the same time enable 3D applications which are "more than Moore." As an example, the manufacturing of a demonstrator for backlighting applications based on thermally activated selective topography equilibration will be presented. This technique allows generating almost arbitrary sloped, convex and concave profiles in the same polymer film with dimensions in micro- and nanometer scale.

  15. Inhibitory effects of phytochemicals on metabolic capabilities of CYP2D6*1 and CYP2D6*10 using cell-based models in vitro

    PubMed Central

    Qu, Qiang; Qu, Jian; Han, Lu; Zhan, Min; Wu, Lan-xiang; Zhang, Yi-wen; Zhang, Wei; Zhou, Hong-hao

    2014-01-01

    Aim: Herbal products have been widely used, and the safety of herb-drug interactions has aroused intensive concerns. This study aimed to investigate the effects of phytochemicals on the catalytic activities of human CYP2D6*1 and CYP2D6*10 in vitro. Methods: HepG2 cells were stably transfected with CYP2D6*1 and CYP2D6*10 expression vectors. The metabolic kinetics of the enzymes was studied using HPLC and fluorimetry. Results: HepG2-CYP2D6*1 and HepG2-CYP2D6*10 cell lines were successfully constructed. Among the 63 phytochemicals screened, 6 compounds, including coptisine sulfate, bilobalide, schizandrin B, luteolin, schizandrin A and puerarin, at 100 μmol/L inhibited CYP2D6*1- and CYP2D6*10-mediated O-demethylation of a coumarin compound AMMC by more than 50%. Furthermore, the inhibition by these compounds was dose-dependent. Eadie-Hofstee plots demonstrated that these compounds competitively inhibited CYP2D6*1 and CYP2D6*10. However, their Ki values for CYP2D6*1 and CYP2D6*10 were very close, suggesting that genotype-dependent herb-drug inhibition was similar between the two variants. Conclusion: Six phytochemicals inhibit CYP2D6*1 and CYP2D6*10-mediated catalytic activities in a dose-dependent manner in vitro. Thus herbal products containing these phytochemicals may inhibit the in vivo metabolism of co-administered drugs whose primary route of elimination is CYP2D6. PMID:24786236

  16. Shape from equal thickness contours

    SciTech Connect

    Cong, G.; Parvin, B.

    1998-05-10

    A unique imaging modality based on Equal Thickness Contours (ETC) has introduced a new opportunity for 3D shape reconstruction from multiple views. We present a computational framework for representing each view of an object in terms of its object thickness, and then integrating these representations into a 3D surface by algebraic reconstruction. The object thickness is inferred by grouping curve segments that correspond to points of second derivative maxima. At each step of the process, we use some form of regularization to ensure closeness to the original features, as well as neighborhood continuity. We apply our approach to images of a sub-micron crystal structure obtained through a holographic process.

  17. Reviewing ChIPS, The Chandra Imaging and Plotting System

    NASA Astrophysics Data System (ADS)

    Miller, J.; Burke, D. J.; Evans, I. N.; Evans, J. D.; McLaughlin, W.

    2015-09-01

    The Chandra Imaging and Plotting System (ChIPS) is a 2D plotting system designed to allow users to easily create, manipulate, and produce publication quality visualizations. ChIPS has a simple but very powerful interactive interface that allows users to dynamically modify the contents and layout of their plots quickly and efficiently, with the results of any changes being immediately visible. ChIPS allows users to construct their plots fully interactively, and then save the final plot commands as a Python script. This bypasses the need to iteratively edit and rerun the script when developing the plot. Features such as undo and redo commands allow users to easily step backwards and forwards through previous commands, while the ability so save ChIPS sessions in a platform-independent state file allows the session to be restored at any time, even on another machine. Because ChIPS offers a Python interface, users can analyze their data using the broad array of modules offered in Python, and visualize the information in ChIPS at the same time. In this paper we explore the design decisions behind the development of ChIPS and some of the lessons learned along the way.

  18. SUPERIMPOSED MESH PLOTTING IN MCNP

    SciTech Connect

    J. HENDRICKS

    2001-02-01

    The capability to plot superimposed meshes has been added to MCNP{trademark}. MCNP4C featured a superimposed mesh weight window generator which enabled users to set up geometries without having to subdivide geometric cells for variance reduction. The variance reduction was performed with weight windows on a rectangular or cylindrical mesh superimposed over the physical geometry. Experience with the new capability was favorable but also indicated that a number of enhancements would be very beneficial, particularly a means of visualizing the mesh and its values. The mathematics for plotting the mesh and its values is described here along with a description of other upgrades.

  19. Radial Frequency Analysis of Contour Shapes in the Visual Cortex

    PubMed Central

    Salmela, Viljami R.; Henriksson, Linda; Vanni, Simo

    2016-01-01

    Cumulative psychophysical evidence suggests that the shape of closed contours is analysed by means of their radial frequency components (RFC). However, neurophysiological evidence for RFC-based representations is still missing. We investigated the representation of radial frequency in the human visual cortex with functional magnetic resonance imaging. We parametrically varied the radial frequency, amplitude and local curvature of contour shapes. The stimuli evoked clear responses across visual areas in the univariate analysis, but the response magnitude did not depend on radial frequency or local curvature. Searchlight-based, multivariate representational similarity analysis revealed RFC specific response patterns in areas V2d, V3d, V3AB, and IPS0. Interestingly, RFC-specific representations were not found in hV4 or LO, traditionally associated with visual shape analysis. The modulation amplitude of the shapes did not affect the responses in any visual area. Local curvature, SF-spectrum and contrast energy related representations were found across visual areas but without similar specificity for visual area that was found for RFC. The results suggest that the radial frequency of a closed contour is one of the cortical shape analysis dimensions, represented in the early and mid-level visual areas. PMID:26866917

  20. Radial Frequency Analysis of Contour Shapes in the Visual Cortex.

    PubMed

    Salmela, Viljami R; Henriksson, Linda; Vanni, Simo

    2016-02-01

    Cumulative psychophysical evidence suggests that the shape of closed contours is analysed by means of their radial frequency components (RFC). However, neurophysiological evidence for RFC-based representations is still missing. We investigated the representation of radial frequency in the human visual cortex with functional magnetic resonance imaging. We parametrically varied the radial frequency, amplitude and local curvature of contour shapes. The stimuli evoked clear responses across visual areas in the univariate analysis, but the response magnitude did not depend on radial frequency or local curvature. Searchlight-based, multivariate representational similarity analysis revealed RFC specific response patterns in areas V2d, V3d, V3AB, and IPS0. Interestingly, RFC-specific representations were not found in hV4 or LO, traditionally associated with visual shape analysis. The modulation amplitude of the shapes did not affect the responses in any visual area. Local curvature, SF-spectrum and contrast energy related representations were found across visual areas but without similar specificity for visual area that was found for RFC. The results suggest that the radial frequency of a closed contour is one of the cortical shape analysis dimensions, represented in the early and mid-level visual areas. PMID:26866917

  1. Brightness alteration with interweaving contours

    PubMed Central

    Roncato, Sergio

    2012-01-01

    Chromatic induction is observed whenever the perceived colour of a target surface shifts towards the hue of a neighbouring surface. Some vivid manifestations may be seen in a white background where thin coloured lines have been drawn (assimilation) or when lines of different colours are collinear (neon effect) or adjacent (watercolour) to each other. This study examines a particular colour induction that manifests in concomitance with an opposite effect of colour saturation (or anti-spread). The two phenomena can be observed when a repetitive pattern is drawn in which outline thin contours intercept wider contours or surfaces, colour spreading appear to fill the surface occupied by surfaces or thick lines whereas the background traversed by thin lines is seen as brighter or filled of a saturated white. These phenomena were first observed by Bozzi (1975) and Kanizsa (1979) in figural conditions that did not allow them to document their conjunction. Here we illustrate various manifestations of this twofold phenomenon and compare its effects with the known effects of brightness and colour induction. Some conjectures on the nature of these effects are discussed. PMID:23483806

  2. Antenna surface contour control system

    NASA Technical Reports Server (NTRS)

    Ahl, Elvin L. (Inventor); Miller, James B. (Inventor)

    1989-01-01

    The invention is a system for automatically controlling the surface contour of a deployable and restowable antenna having a mesh reflector surface supported by a circular, folding hoop affixed to a central, telescoping column. The antenna, when deployed, forms a quad-aperture reflector with each quadrant of the mesh surface shaped to provide an offset parabolic radio frequency (RF) reflector. The hoop is supported and positioned by quartz support cords attached to the top of a column and by lower graphite hoop control cords that extend between the hoop and base of the column. The antenna, an RF reflective surface, is a gold plated molybdenum wire mesh supported on a graphite cord truss structure that includes the hoop control cords and a plurality of surface control cords attached at selected points on the surface and to the base of the column. The contour of the three-dimensional surface of the antenna is controlled by selectively adjusting the lengths of the surface control cords and the graphite hoop control cords by means of novel actuator assemblies that automatically sense and change the lengths of the lower hoop control cords and surface control cords.

  3. The Laura++ Dalitz plot fitter

    NASA Astrophysics Data System (ADS)

    Latham, Thomas

    2016-05-01

    The Laura++ software package is designed for performing fits of amplitude models to data from decays of spin-0 particles into final states containing three spin-0 particles — so-called Dalitz-plot analysis. An overview of the amplitude formalism and its software implementation is given as well as summaries of recently added features and planned future developments.

  4. Projection moire for remote contour analysis

    NASA Technical Reports Server (NTRS)

    Doty, J. L.

    1983-01-01

    Remote projection and viewing of moire contours are examined analytically for a system employing separate projection and viewing optics, with specific attention paid to the practical limitations imposed by the optical systems. It is found that planar contours are possible only when the optics are telecentric (exit pupil at infinity) but that the requirement for spatial separability of the contour fringes from extraneous fringes is independent of the specific optics and is a function only of the angle separating the two optic axes. In the nontelecentric case, the contour separation near the object is unchanged from that of the telecentric case, although the contours are distorted into low-eccentricity (near-circular) ellipses. Furthermore, the minimum contour spacing is directly related to the depth of focus through the resolution of the optics.

  5. Contour trenching, a contribution to artificial recharge in a semi-arid area in Vietnam

    NASA Astrophysics Data System (ADS)

    Pramana, K. E. R.; Ertsen, M. W.; Uhlenbrook, S.; van de Giesen, N. C.

    2010-05-01

    The long term impact of contour trenching tends to be that more runoff turns into groundwater recharge. In 2008, the contribution of recharge at a contour trench plot was determined as potential and not quite visible. Recharge has not been confirmed, since groundwater level data at the contour trench plot were not available. For further study, 4 new observation wells were installed on 8 hectares contour trench plot to asses the impact of the trenches to the groundwater system. This investigation was conducted during a single rainy season in 2009, shortly after the construction of the new observation wells. The subsurface conditions seemed to be an important feature controlling recharge processes and groundwater flow. Well logs data indicated granite bedrock at about 25 m below loamy sand and weathered granite layer respectively. The groundwater measurements are showing almost constant and fluctuated groundwater level between 1 to 15 meters deep below the trenches. More important is that data are showing a rising trend because of the infiltration of ponding water in the trenches. Additionally, water logging could be found remaining in weeks after rainfall events at the most downhill of the contour trench plot. Annual rainfall reached 1303 mm, suggesting a rarely wet year. After 4 heavy rainfall events, runoff from uphill and outside the contour trench plot randomly filled up the trenches, yielded to roughly 4 times filling up the volume of the trenches. Ponding water infiltrated further in different temporal scale. Whilst at the same time, erosion occurred at the uphill area, bringing along fine sediment towards the trenches. It eventually creates a sediment layer at the bottom the trenches which in accordance reduces the infiltration capacity and thus increases the time of ponding of water. MODHMS from HydroGeologic Inc. (a fully coupled surface water, unsaturated zone and groundwater model) was used to simulate the hydrological condition and measured groundwater

  6. Contouring variability of human- and deformable-generated contours in radiotherapy for prostate cancer

    NASA Astrophysics Data System (ADS)

    Gardner, Stephen J.; Wen, Ning; Kim, Jinkoo; Liu, Chang; Pradhan, Deepak; Aref, Ibrahim; Cattaneo, Richard, II; Vance, Sean; Movsas, Benjamin; Chetty, Indrin J.; Elshaikh, Mohamed A.

    2015-06-01

    This study was designed to evaluate contouring variability of human-and deformable-generated contours on planning CT (PCT) and CBCT for ten patients with low-or intermediate-risk prostate cancer. For each patient in this study, five radiation oncologists contoured the prostate, bladder, and rectum, on one PCT dataset and five CBCT datasets. Consensus contours were generated using the STAPLE method in the CERR software package. Observer contours were compared to consensus contour, and contour metrics (Dice coefficient, Hausdorff distance, Contour Distance, Center-of-Mass [COM] Deviation) were calculated. In addition, the first day CBCT was registered to subsequent CBCT fractions (CBCTn: CBCT2-CBCT5) via B-spline Deformable Image Registration (DIR). Contours were transferred from CBCT1 to CBCTn via the deformation field, and contour metrics were calculated through comparison with consensus contours generated from human contour set. The average contour metrics for prostate contours on PCT and CBCT were as follows: Dice coefficient—0.892 (PCT), 0.872 (CBCT-Human), 0.824 (CBCT-Deformed); Hausdorff distance—4.75 mm (PCT), 5.22 mm (CBCT-Human), 5.94 mm (CBCT-Deformed); Contour Distance (overall contour)—1.41 mm (PCT), 1.66 mm (CBCT-Human), 2.30 mm (CBCT-Deformed); COM Deviation—2.01 mm (PCT), 2.78 mm (CBCT-Human), 3.45 mm (CBCT-Deformed). For human contours on PCT and CBCT, the difference in average Dice coefficient between PCT and CBCT (approx. 2%) and Hausdorff distance (approx. 0.5 mm) was small compared to the variation between observers for each patient (standard deviation in Dice coefficient of 5% and Hausdorff distance of 2.0 mm). However, additional contouring variation was found for the deformable-generated contours (approximately 5.0% decrease in Dice coefficient and 0.7 mm increase in Hausdorff distance relative to human-generated contours on CBCT). Though deformable contours provide a reasonable starting point for contouring on

  7. Contoured insulation window for evacuated solar collector

    SciTech Connect

    Coppola, F. T.; Lentz, W. P.; Vandewoestine, R. V.

    1980-02-05

    An insulating contoured window is provided for use with an enclosed chamber such as an evacuated flat plate solar heat collector with the contoured solar window being of minimum thickness and supported solely about its peripheral edge portions. The window is contoured in both its longitudinal and transverse directions, such that in its longitudinal direction the window is composed of a plurality of sinusoidal corrugations whereas in its transverse direction the peaks of such corrugations are contoured in the form of paraboloids so that the structure may withstand the forces generated thereon by the atmosphere.

  8. Creation of digital contours that approach the characteristics of cartographic contours

    USGS Publications Warehouse

    Tyler, Dean J.; Greenlee, Susan K.

    2012-01-01

    The capability to easily create digital contours using commercial off-the-shelf (COTS) software has existed for decades. Out-of-the-box raw contours are suitable for many scientific applications without pre- or post-processing; however, cartographic applications typically require additional improvements. For example, raw contours generally require smoothing before placement on a map. Cartographic contours must also conform to certain spatial/logical rules; for example, contours may not cross waterbodies. The objective was to create contours that match as closely as possible the cartographic contours produced by manual methods on the 1:24,000-scale, 7.5-minute Topographic Map series. This report outlines the basic approach, describes a variety of problems that were encountered, and discusses solutions. Many of the challenges described herein were the result of imperfect input raster elevation data and the requirement to have the contours integrated with hydrographic features from the National Hydrography Dataset (NHD).

  9. Improvement of a 2D numerical model of lava flows

    NASA Astrophysics Data System (ADS)

    Ishimine, Y.

    2013-12-01

    I propose an improved procedure that reduces an improper dependence of lava flow directions on the orientation of Digital Elevation Model (DEM) in two-dimensional simulations based on Ishihara et al. (in Lava Flows and Domes, Fink, JH eds., 1990). The numerical model for lava flow simulations proposed by Ishihara et al. (1990) is based on two-dimensional shallow water model combined with a constitutive equation for a Bingham fluid. It is simple but useful because it properly reproduces distributions of actual lava flows. Thus, it has been regarded as one of pioneer work of numerical simulations of lava flows and it is still now widely used in practical hazard prediction map for civil defense officials in Japan. However, the model include an improper dependence of lava flow directions on the orientation of DEM because the model separately assigns the condition for the lava flow to stop due to yield stress for each of two orthogonal axes of rectangular calculating grid based on DEM. This procedure brings a diamond-shaped distribution as shown in Fig. 1 when calculating a lava flow supplied from a point source on a virtual flat plane although the distribution should be circle-shaped. To improve the drawback, I proposed a modified procedure that uses the absolute value of yield stress derived from both components of two orthogonal directions of the slope steepness to assign the condition for lava flows to stop. This brings a better result as shown in Fig. 2. Fig. 1. (a) Contour plots calculated with the original model of Ishihara et al. (1990). (b) Contour plots calculated with a proposed model.

  10. Body Contouring After Bariatric Surgery.

    PubMed

    Ellison, Jo M; Steffen, Kristine J; Sarwer, David B

    2015-11-01

    Individuals who undergo bariatric surgery generally experience rapid and dramatic weight loss. While the weight loss typically confers significant health benefits, an undesirable consequence is often excessive quantities of hanging, surplus skin. Some patients undergo body-contouring surgery (BCS) in order to improve health, mobility, appearance and psychological adjustment. While the majority of post-bariatric patients desire BCS in one or more body regions, a small percentage of patients receive such surgeries. Lack of knowledge about procedures, cost and (in the USA and several other countries) difficulty obtaining insurance reimbursement likely prevents many patients from undergoing BCS. Those who do undergo BCS appear to be at heightened risk for wound-healing complications. Despite these complications, the majority of patients report satisfactory BCS outcomes. The extant literature in this area provides a great deal of information about these issues; nevertheless, additional research is needed to further inform clinical management and improve patient outcomes. PMID:26395601

  11. Sodium Deoxycholate for Submental Contouring.

    PubMed

    Humphrey, S; Beleznay, K; Beleznay, J D A

    2016-09-01

    The chin and jaw line are integral parts of an individual's aesthetic profile, and the presence of submental fat detracts from this and can lead to displeasure with one's facial appearance. While liposuction and cosmetic surgery are regarded as the gold standard in treating submental fat, surgical intervention is not appealing to all patients and has potential surgical complications including longer recovery, and contour irregularities. Despite ample advances in aesthetic medicine to enhance the appearance of the face, very little is available in non-invasive options to reduce submental fat that has been supported by robust evidence. ATX-101, a proprietary formulation of deoxycholic acid that is synthetically derived, has been extensively explored in a vigorous clinical development program that has established the safety and efficacy of the injectable. It has recently received approval by regulatory authorities in Canada (Belkyra™) and the US (Kybella®) for the treatment of submental fat. PMID:27603325

  12. Grazing incidence neutron diffraction from large scale 2D structures

    SciTech Connect

    Toperverg, B. P.; Felcher, G. P.; Metlushko, V. V.; Leiner, V.; Siebrecht, R.; Nikonov, O.

    2000-01-13

    The distorted wave Born approximation (DWBA) is applied to evaluate the diffraction pattern of neutrons (or X-rays) from a 2D array of dots deposited onto a dissimilar substrate. With the radiation impinging on the surface at a grazing incidence angle {alpha}, the intensities diffracted both in and out the plane of specular reflection are calculated as a function of the periodicity of the array, height and diameter of the dots. The results are presented in the form of diffracted intensity contours in a plane with coordinates {alpha} and {alpha}{prime}, the latter being the glancing angle of scattering. The optimization of the experimental conditions for polarized neutron experiments on submicron dots is discussed. The feasibility of such measurements is confirmed by a test experiment.

  13. Interval and Contour Processing in Autism

    ERIC Educational Resources Information Center

    Heaton, Pamela

    2005-01-01

    High functioning children with autism and age and intelligence matched controls participated in experiments testing perception of pitch intervals and musical contours. The finding from the interval study showed superior detection of pitch direction over small pitch distances in the autism group. On the test of contour discrimination no group…

  14. Auditory and Visual Similarity of Pitch Contours.

    ERIC Educational Resources Information Center

    Hermes, Dik J.

    1998-01-01

    In two experiments, five phoneticians rated the dissimilarity of two pitch contours to investigate whether important audible differences would correspond with visually conspicuous differences between displayed pitch contours. Results indicate that visual feedback may be very effective in intonation training if auditorily relevant features of pitch…

  15. Measuring the Perceptual Similarity of Pitch Contours.

    ERIC Educational Resources Information Center

    Hermes, Dik J.

    1998-01-01

    This study investigated the effectiveness of four different methods for measuring the similarity of pitch contours. The correlation coefficient between two normalized contours was the best method; however, if pitch range is important, the mean distance and the root-mean-square distance should be considered first in automatic training in…

  16. Analysis of DC Characteristics and Small Signal Equivalent Circuit Parameters of GaAs Metal-Semiconductor Field Effect Transistors with Different Gate Lengths and Different Gate Contours by Two-Dimensional Device Simulations

    NASA Astrophysics Data System (ADS)

    Meng, C. C.; Su, J. Y.; Yang, S. M.

    2005-09-01

    The gate length and gate contour of a GaAs metal-semiconductor field effect transistor (MESFET) device play important roles in determining the small signal circuit parameters and large signal breakdown voltage behavior. GaAs MESFETs with different gate lengths and gate contours were studied by the two-dimensional (2-D) semiconductor device simulations to investigate the dependence of small signal circuit parameters and breakdown voltage on gate length and gate contour. The results show that gate length affects small-signal circuit parameter Cgs while gate contour affects Cgd. The breakdown voltage has strong dependence on gate contour and little dependence on gate length.

  17. Feasibility study consisting of a review of contour generation methods from stereograms

    NASA Technical Reports Server (NTRS)

    Kim, C. J.; Wyant, J. C.

    1980-01-01

    A review of techniques for obtaining contour information from stereo pairs is given. Photogrammetric principles including a description of stereoscopic vision are presented. The use of conventional contour generation methods, such as the photogrammetric plotting technique, electronic correlator, and digital correlator are described. Coherent optical techniques for contour generation are discussed and compared to the electronic correlator. The optical techniques are divided into two categories: (1) image plane operation and (2) frequency plane operation. The description of image plane correlators are further divided into three categories: (1) image to image correlator, (2) interferometric correlator, and (3) positive negative transparencies. The frequency plane correlators are divided into two categories: (1) correlation of Fourier transforms, and (2) filtering techniques.

  18. ABCASH plotting program users guide

    SciTech Connect

    Troyer, G.L.

    1995-04-25

    The Automated Bar Coding of Air Samples at Hanford (ABCASH) system provides an integrated data collection, sample tracking, and data reporting system for radioactive particulate air filter samples. The ABCASH plotting program provides a graphical trend report for ABCASH of the performance of air sample results. This document provides an operational guide for using the program. Based on sample location identifier and date range, a trend chart of the available data is generated. The trend chart shows radiological activity versus time. General indications of directional trend of the concentrations in air over time may be discerned. Comparison limit set point values are also shown as derived from the ABCASH data base.

  19. NKG2D ligands as therapeutic targets

    PubMed Central

    Spear, Paul; Wu, Ming-Ru; Sentman, Marie-Louise; Sentman, Charles L.

    2013-01-01

    The Natural Killer Group 2D (NKG2D) receptor plays an important role in protecting the host from infections and cancer. By recognizing ligands induced on infected or tumor cells, NKG2D modulates lymphocyte activation and promotes immunity to eliminate ligand-expressing cells. Because these ligands are not widely expressed on healthy adult tissue, NKG2D ligands may present a useful target for immunotherapeutic approaches in cancer. Novel therapies targeting NKG2D ligands for the treatment of cancer have shown preclinical success and are poised to enter into clinical trials. In this review, the NKG2D receptor and its ligands are discussed in the context of cancer, infection, and autoimmunity. In addition, therapies targeting NKG2D ligands in cancer are also reviewed. PMID:23833565

  20. Effect of Contour Felled Log Treatment on Runoff and Erosion After Wildfire

    NASA Astrophysics Data System (ADS)

    Gartner, J. D.

    2001-12-01

    Contour felled logs (also known as log erosion barriers) are used increasingly to control runoff and erosion after wildfires, yet their effectiveness at different scales and rainfall intensities is poorly understood. Following the June 2000 Hi Meadow Fire near Bailey, Colorado, we instrumented four adjacent, severely burned watersheds (5 to 15 ha) with a total of twelve rainfall gages, eight 1-meter long sediment traps, eight 10-meter long sediment traps, 4 check dams, and 4 stream gages. Two watersheds were treated with contour felled logs, and two were not. With this network of instruments, we examined rainfall, runoff, and sediment production relationships at the plot (1 m2), hillslope (500 m2) and watershed (5 ha and 15 ha) scales in the summer and fall of 2001. To date, seven storms have produced runoff. The maximum intensity storm rained 5 mm in 15 minutes. Preliminary results suggest that the contour felled log treatment is less important in determining runoff and sediment production than other basin characteristics such as channel morphology, soil properties and revegetation rates. At the plot scale, our data show no significant difference between treated and untreated areas in erosion and runoff. However, the contour felled log treatment may reduce erosion and runoff at the hillslope and watershed scales in low and medium intensity storms (less than 6 mm/hr). This study can help guide future studies on runoff and erosion mitigation as well as cost-benefit analysis of post-fire rehabilitation.

  1. Spectral measurements in support of SIR-B using the Surface Contour Radar. [for South Pacific

    NASA Technical Reports Server (NTRS)

    Walsh, E. J.; Hancock, D. W., III; Hines, D. E.; Swift, R. N.; Scott, J. F.

    1985-01-01

    The use of the Surface Contour Radar (SCR) from an aircraft to obtain spectral information on the seas off the tip of South America, in support of the SIR-B experiment in October 1984, is reported. The SCR is a computer-controlled 36-GHz radar that measures sea surface directional wave spectra and produces a real-time topographical map of the surface below the aircraft. Ground tracks and polar plots of the data obtained are illustrated.

  2. Determination of the absolute contours of optical flats

    NASA Technical Reports Server (NTRS)

    Primak, W.

    1969-01-01

    Emersons procedure is used to determine true absolute contours of optical flats. Absolute contours of standard flats are determined and a comparison is then made between standard and unknown flats. Contour differences are determined by deviation of Fizeau fringe.

  3. WE-D-9A-01: A Novel Mesh-Based Deformable Surface-Contour Registration

    SciTech Connect

    Zhong, Z; Cai, Y; Guo, X; Jia, X; Chiu, T; Kearney, V; Liu, H; Jiang, L; Chen, S; Yordy, J; Nedzi, L; Mao, W

    2014-06-15

    Purpose: Initial guess is vital for 3D-2D deformable image registration (DIR) while dealing with large deformations for adaptive radiation therapy. A fast procedure has been developed to deform body surface to match 2D body contour on projections. This surface-contour DIR will provide an initial deformation for further complete 3D DIR or image reconstruction. Methods: Both planning CT images and come-beam CT (CBCT) projections are preprocessed to create 0–1 binary mask. Then the body surface and CBCT projection body contours are extracted by Canny edge detector. A finite element modeling system was developed to automatically generate adaptive meshes based on the image surface. After that, the projections of the CT surface voxels are computed and compared with corresponding 2D projection contours from CBCT scans. As a result, the displacement vector field (DVF) on mesh vertices around the surface was optimized iteratively until the shortest Euclidean distance between the pixels on the projections of the deformed CT surface and the corresponding CBCT projection contour is minimized. With the help of the tetrahedral meshes, we can smoothly diffuse the deformation from the surface into the interior of the volume. Finally, the deformed CT images are obtained by the optimal DVF applied on the original planning CT images. Results: The accuracy of the surface-contour registration is evaluated by 3D normalized cross correlation increased from 0.9176 to 0.9957 (sphere-ellipsoid phantom) and from 0.7627 to 0.7919 (H and N cancer patient data). Under the GPU-based implementation, our surface-contour-guided method on H and N cancer patient data takes 8 seconds/iteration, about 7.5 times faster than direct 3D method (60 seconds/iteration), and it needs fewer optimization iterations (30 iterations vs 50 iterations). Conclusion: The proposed surface-contour DIR method can substantially improve both the accuracy and the speed of reconstructing volumetric images, which is helpful

  4. Preparation of magnetic anomaly profile and contour maps from DOE-NURE aerial survey data. Volume I. Processing procedures

    SciTech Connect

    Tinnel, E.P.; Hinze, W.J.

    1981-09-01

    Total intensity magnetic anomaly data acquired as a supplement to radiometric data in the DOE National Uranium Resource Evaluation (NURE) Program are useful in preparing regional profile and contour maps. Survey-contractor-supplied magnetic anomaly data are subjected to a multiprocess, computer-based procedure which prepares these data for presentation. This procedure is used to produce the following machine plotted maps of National Topographic Map Series quadrangle units at a 1:250,000 scale: (1) profile map of contractor-supplied magnetic anomaly data, (2) profile map of high-cut filtered data with contour levels of each profile marked and annotated on the associated flight track, (3) profile map of critical-point data with contour levels indicated, and (4) contour map of filtered and selected data. These quadrangle maps are supplemented with a range of statistical measures of the data which are useful in quality evaluation.

  5. The hydrological impact of contour trenching in Vietnam

    NASA Astrophysics Data System (ADS)

    Pramana, K. E. R.; Ertsen, M. W.; Uhlenbrook, S.; de Laat, P.; Nonner, J.

    2009-04-01

    At the foothill in the driest rural area in Vietnam, at Ninh Thuan province, poor farmers cultivate up-land crops during the wet season. The area is about 9 hectares of deforested land with a slope up to 8% and has a geology surface of crusted sands and gravels. Water is scarce during the dry season and runs off rapidly during the wet season. Hence, to provide sustainable water resources and support crop growth, a project started in 2007 aiming introducing contour trenching. The main purpose of contour trenching is to trap run off, increase soil moisture for vegetation growth and recharge the groundwater. In order to investigate the impact of the trenches, a field monitoring program was initiated measuring rainfall, soil moisture content, surface water levels and groundwater levels. Recorded annual rainfall reached 600 mm. The groundwater levels are relatively deep and constant at -8 and -10 meters. The soil moisture content ranged from 3% at the driest condition to 37% below the trench at ponding. Water levels in trenches differed from uphill to downhill with higher levels at the first trench uphill. After ponding, water in the trenches infiltrates within a period of days. In this contribution, available field measurements are analyzed in two ways. First, runoff is analyzed. Immediately after significant rainfall events, the observed ponding levels in the trenches with defined uphill runoff areas can be related to the rainfall. The results show reduction of runoff coefficients per trench in downhill direction. Second, the two dimension numerical saturated-unsaturated model Hydrus 2-D was used to simulate the soil moisture content measurements. Model results confirm that infiltration is a quick process in this area with its loamy sand soils. Based on these analyzes, potential of contour trenches for local water retention and groundwater recharge will be discussed.

  6. Calculate and Plot Complex Potential

    1998-05-05

    SOLUPLOT is a program designed to calculate and plot complex potential, pH diagrams and log oxygen activity, pH diagrams for aqueous chemical syatems, considering speciation of ligands, from free energy and thermodynamic activity data. These diagrams, commonly referred to as Eh-pH and ao2-pH diagrams, respectively, define areas of predominance in Eh-pH diagrams or ao2-pH space for chemical species of a chemical system at equilibrium. Over an area of predominance, one predominant species is at greatermore » activity than the other species of the system considered. The diagram axes, pH (a measure of hydrogen ion activity) and either Eh or log ao2 (measures of a tendency toward either oxidation or reduction) , are paremeters commonly applied in describing the chemistry of aqueous systems.« less

  7. Biclusters Visualization and Detection Using Parallel Coordinate Plots

    NASA Astrophysics Data System (ADS)

    Cheng, K. O.; Law, N. F.; Siu, W. C.; Liew, A. W. C.

    2007-11-01

    The parallel coordinate (PC) plot is a powerful visualization tools for high-dimensional data. In this paper, we explore its usage on gene expression data analysis. We found that both the additive-related and the multiplicative-related coherent genes exhibit special patterns in the PC plots. One-dimensional clustering can then be applied to detect these patterns. Besides, a split-and-merge mechanism is employed to find the biggest coherent subsets inside the gene expression matrix. Experimental results showed that our proposed algorithm is effective in detecting various types of biclusters. In addition, the biclustering results can be visualized under a 2D setting, in which objective and subjective cluster quality evaluation can be performed.

  8. Extreme_SeaState_Contour_v1

    2015-10-19

    This software generates environmental contours of extreme sea states using buoy observations of significant wave height and energy period or peak period. The code transforms these observations using principal component analysis (PCA) to create an uncorrelated representation of the data. The subsequent components are modeled using probability distributions and parameter fitting functions. The inverse first-order reliability method (I-FORM) is then applied to these models in order to generate an extreme event contour based on amore » given return period (i.e., 100 years).The subsequent contour is then transformed back into the original input space defined by the variables of interest in order to create an environmental contour of extreme sea states.« less

  9. Extreme_SeaState_Contour_v1

    SciTech Connect

    2015-10-19

    This software generates environmental contours of extreme sea states using buoy observations of significant wave height and energy period or peak period. The code transforms these observations using principal component analysis (PCA) to create an uncorrelated representation of the data. The subsequent components are modeled using probability distributions and parameter fitting functions. The inverse first-order reliability method (I-FORM) is then applied to these models in order to generate an extreme event contour based on a given return period (i.e., 100 years).The subsequent contour is then transformed back into the original input space defined by the variables of interest in order to create an environmental contour of extreme sea states.

  10. Holding fixture for variable-contour parts

    NASA Technical Reports Server (NTRS)

    Haynie, C. C.; Packer, P. N.; Zebus, P. P.

    1979-01-01

    Array of vacuum cups on spindles holds parts for safe machining and other processings. Variable-contour part resting on fixture is held firmly enough for machining, coating, or other mechanical treatment.

  11. The contour method cutting assumption: error minimization and correction

    SciTech Connect

    Prime, Michael B; Kastengren, Alan L

    2010-01-01

    The recently developed contour method can measure 2-D, cross-sectional residual-stress map. A part is cut in two using a precise and low-stress cutting technique such as electric discharge machining. The contours of the new surfaces created by the cut, which will not be flat if residual stresses are relaxed by the cutting, are then measured and used to calculate the original residual stresses. The precise nature of the assumption about the cut is presented theoretically and is evaluated experimentally. Simply assuming a flat cut is overly restrictive and misleading. The critical assumption is that the width of the cut, when measured in the original, undeformed configuration of the body is constant. Stresses at the cut tip during cutting cause the material to deform, which causes errors. The effect of such cutting errors on the measured stresses is presented. The important parameters are quantified. Experimental procedures for minimizing these errors are presented. An iterative finite element procedure to correct for the errors is also presented. The correction procedure is demonstrated on experimental data from a steel beam that was plastically bent to put in a known profile of residual stresses.

  12. Spatially-global integration of closed, fragmented contours by finding the shortest-path in a log-polar representation

    PubMed Central

    Kwon, TaeKyu; Agrawal, Kunal; Li, Yunfeng; Pizlo, Zygmunt

    2015-01-01

    Finding the occluding contours of objects in real 2D retinal images of natural 3D scenes is done by determining, which contour fragments are relevant, and the order in which they should be connected. We developed a model that finds the closed contour represented in the image by solving a shortest path problem that uses a log-polar representation of the image; the kind of representation known to exist in area V1 of the primate cortex. The shortest path in a log-polar representation favors the smooth, convex and closed contours in the retinal image that have the smallest number of gaps. This approach is practical because finding a globally-optimal solution to a shortest path problem is computationally easy. Our model was tested in four psychophysical experiments. In the first two experiments, the subject was presented with a fragmented convex or concave polygon target among a large number of unrelated pieces of contour (distracters). The density of these pieces of contour was uniform all over the screen to minimize spatially-local cues. The orientation of each target contour fragment was randomly perturbed by varying the levels of jitter. Subjects drew a closed contour that represented the target’s contour on a screen. The subjects’ performance was nearly perfect when the jitter-level was low. Their performance deteriorated as jitter-levels were increased. The performance of our model was very similar to our subjects’. In two subsequent experiments, the subject was asked to discriminate a briefly-presented egg-shaped object while maintaining fixation at several different positions relative to the closed contour of the shape. The subject’s discrimination performance was affected by the fixation position in much the same way as the model’s. PMID:26241462

  13. Perspectives for spintronics in 2D materials

    NASA Astrophysics Data System (ADS)

    Han, Wei

    2016-03-01

    The past decade has been especially creative for spintronics since the (re)discovery of various two dimensional (2D) materials. Due to the unusual physical characteristics, 2D materials have provided new platforms to probe the spin interaction with other degrees of freedom for electrons, as well as to be used for novel spintronics applications. This review briefly presents the most important recent and ongoing research for spintronics in 2D materials.

  14. Jefferson Lab Plotting Toolkit for accelerator controls

    SciTech Connect

    Chen, J; Keesee, M; Larrieu, C; Lei, G

    1999-03-01

    Experimental physics generates numerous data sets that scientists analyze using plots, graphs, etc. The Jefferson Lab Plotting Toolkit, JPT, a graphical user interface toolkit, was developed at Jefferson Lab to do data plotting. JPT provides data structures for sets of data, analyzes the range of the data, calculates the reasonable maximum, minimum, and scale of axes, sets line styles and marker styles, plots curves and fills areas.

  15. Characterization of Porous Medium Properties Using 2D NMR

    NASA Astrophysics Data System (ADS)

    Sun, Boqin; Dunn, Keh-Jim

    2003-03-01

    We have successfully applied the concept of 2D NMR to the characterization of properties of fluid-saturated porous medium. Using a two-windowed modified CPMG pulse sequence, we were able to explore the magnetic internal filed gradient distribution within the pore space of a fluid-saturated porous medium due to magnetic susceptibility contrast between the solid matrix and pore fluid. Similar scheme is used to identify and quantify different types of pore fluids, such as oil, water, and gas, based on the contrast in their diffusion coefficients. The magic angle spinning technique (MAS) can also be applied in the 2D NMR framework for delineating the chemical shift spectra of the pore fluids in a porous medium at different T1 or T2 relaxation times. The results can be displayed in a two-dimensional plot, with one axis being the T1 or T2 relaxation times, the other axis being the internal field gradient, diffusion coefficient, or chemical shift, and the third axis being the proton population. Our preliminary laboratory work indicates that the 2D NMR approach can be a powerful tool for the characterization of properties of fluid-saturated porous medium, such as fluid typing, oil viscosity determination, surface wettability, etc.

  16. Isolating contour information from arbitrary images

    NASA Technical Reports Server (NTRS)

    Jobson, Daniel J.

    1989-01-01

    Aspects of natural vision (physiological and perceptual) serve as a basis for attempting the development of a general processing scheme for contour extraction. Contour information is assumed to be central to visual recognition skills. While the scheme must be regarded as highly preliminary, initial results do compare favorably with the visual perception of structure. The scheme pays special attention to the construction of a smallest scale circular difference-of-Gaussian (DOG) convolution, calibration of multiscale edge detection thresholds with the visual perception of grayscale boundaries, and contour/texture discrimination methods derived from fundamental assumptions of connectivity and the characteristics of printed text. Contour information is required to fall between a minimum connectivity limit and maximum regional spatial density limit at each scale. Results support the idea that contour information, in images possessing good image quality, is (centered at about 10 cyc/deg and 30 cyc/deg). Further, lower spatial frequency channels appear to play a major role only in contour extraction from images with serious global image defects.

  17. Hyperspectral image segmentation using active contours

    NASA Astrophysics Data System (ADS)

    Lee, Cheolha P.; Snyder, Wesley E.

    2004-08-01

    Multispectral or hyperspectral image processing has been studied as a possible approach to automatic target recognition (ATR). Hundreds of spectral bands may provide high data redundancy, compensating the low contrast in medium wavelength infrared (MWIR) and long wavelength infrared (LWIR) images. Thus, the combination of spectral (image intensity) and spatial (geometric feature) information analysis could produce a substantial improvement. Active contours provide segments with continuous boundaries, while edge detectors based on local filtering often provide discontinuous boundaries. The segmentation by active contours depends on geometric feature of the object as well as image intensity. However, the application of active contours to multispectral images has been limited to the cases of simply textured images with low number of frames. This paper presents a supervised active contour model, which is applicable to vector-valued images with non-homogeneous regions and high number of frames. In the training stage, histogram models of target classes are estimated from sample vector-pixels. In the test stage, contours are evolved based on two different metrics: the histogram models of the corresponding segments and the histogram models estimated from sample target vector-pixels. The proposed segmentation method integrates segmentation and model-based pattern matching using supervised segmentation and multi-phase active contour model, while traditional methods apply pattern matching only after the segmentation. The proposed algorithm is implemented with both synthetic and real multispectral images, and shows desirable segmentation and classification results even in images with non-homogeneous regions.

  18. Automatic bootstrapping and tracking of object contours.

    PubMed

    Chiverton, John; Xie, Xianghua; Mirmehdi, Majid

    2012-03-01

    A new fully automatic object tracking and segmentation framework is proposed. The framework consists of a motion-based bootstrapping algorithm concurrent to a shape-based active contour. The shape-based active contour uses finite shape memory that is automatically and continuously built from both the bootstrap process and the active-contour object tracker. A scheme is proposed to ensure that the finite shape memory is continuously updated but forgets unnecessary information. Two new ways of automatically extracting shape information from image data given a region of interest are also proposed. Results demonstrate that the bootstrapping stage provides important motion and shape information to the object tracker. This information is found to be essential for good (fully automatic) initialization of the active contour. Further results also demonstrate convergence properties of the content of the finite shape memory and similar object tracking performance in comparison with an object tracker with unlimited shape memory. Tests with an active contour using a fixed-shape prior also demonstrate superior performance for the proposed bootstrapped finite-shape-memory framework and similar performance when compared with a recently proposed active contour that uses an alternative online learning model. PMID:21908256

  19. Surgical correction of postliposuction contour irregularities.

    PubMed

    Chang, K N

    1994-07-01

    The surgical correction of postliposuction contour irregularities and the results are presented. Postliposuction contour irregularities are classified as major or minor according to the size of the area, severity of the irregularity, difficulty of the correction, visual impact, and the need for dermolipectomy. Methods of correction include (1) liposuction of the area of protuberance, (2) liposuction around the area of depression, (3) simultaneous fat grafting, and (4) dermolipectomy. Results of 22 patients with 43 areas of postliposuction contour irregularities were analyzed. Follow-up ranged from 1 to 4.8 years (mean 2.1 +/- 1.0 years). All patients had corrective liposuction except one, who required medial thigh dermolipectomy. Fat grafting was performed in 19 areas in 9 patients. Average number of operations performed was 1.4 per patient (range 1 to 3). Of 17 areas of minor postliposuction contour irregularities, 8 (47 percent) were improved and 8 (47 percent) were corrected. Of 26 areas of major postliposuction contour irregularities, 17 (65 percent) were improved and 8 (31 percent) were corrected. Of all 43 areas, 25 (58 percent) were improved and 16 (37 percent) were corrected. Overcorrection in two areas (4.7 percent) resulted in minor depressions in 2 patients. Results from 5 patients are presented. In summary, postliposuction contour irregularities were treated with various surgical techniques with a high rate of improvement or correction. PMID:8016225

  20. Annotated Bibliography of EDGE2D Use

    SciTech Connect

    J.D. Strachan and G. Corrigan

    2005-06-24

    This annotated bibliography is intended to help EDGE2D users, and particularly new users, find existing published literature that has used EDGE2D. Our idea is that a person can find existing studies which may relate to his intended use, as well as gain ideas about other possible applications by scanning the attached tables.

  1. Staring 2-D hadamard transform spectral imager

    DOEpatents

    Gentry, Stephen M.; Wehlburg, Christine M.; Wehlburg, Joseph C.; Smith, Mark W.; Smith, Jody L.

    2006-02-07

    A staring imaging system inputs a 2D spatial image containing multi-frequency spectral information. This image is encoded in one dimension of the image with a cyclic Hadamarid S-matrix. The resulting image is detecting with a spatial 2D detector; and a computer applies a Hadamard transform to recover the encoded image.

  2. Prostate Contouring Variation: Can It Be Fixed?

    SciTech Connect

    Khoo, Eric L.H.; Schick, Karlissa; Plank, Ashley W.; Poulsen, Michael; Wong, Winnie W.G.; Middleton, Mark; Martin, Jarad M.

    2012-04-01

    Purpose: To assess whether an education program on CT and MRI prostate anatomy would reduce inter- and intraobserver prostate contouring variation among experienced radiation oncologists. Methods and Materials: Three patient CT and MRI datasets were selected. Five radiation oncologists contoured the prostate for each patient on CT first, then MRI, and again between 2 and 4 weeks later. Three education sessions were then conducted. The same contouring process was then repeated with the same datasets and oncologists. The observer variation was assessed according to changes in the ratio of the encompassing volume to intersecting volume (volume ratio [VR]), across sets of target volumes. Results: For interobserver variation, there was a 15% reduction in mean VR with CT, from 2.74 to 2.33, and a 40% reduction in mean VR with MRI, from 2.38 to 1.41 after education. A similar trend was found for intraobserver variation, with a mean VR reduction for CT and MRI of 9% (from 1.51 to 1.38) and 16% (from 1.37 to 1.15), respectively. Conclusion: A well-structured education program has reduced both inter- and intraobserver prostate contouring variations. The impact was greater on MRI than on CT. With the ongoing incorporation of new technologies into routine practice, education programs for target contouring should be incorporated as part of the continuing medical education of radiation oncologists.

  3. Light field morphing using 2D features.

    PubMed

    Wang, Lifeng; Lin, Stephen; Lee, Seungyong; Guo, Baining; Shum, Heung-Yeung

    2005-01-01

    We present a 2D feature-based technique for morphing 3D objects represented by light fields. Existing light field morphing methods require the user to specify corresponding 3D feature elements to guide morph computation. Since slight errors in 3D specification can lead to significant morphing artifacts, we propose a scheme based on 2D feature elements that is less sensitive to imprecise marking of features. First, 2D features are specified by the user in a number of key views in the source and target light fields. Then the two light fields are warped view by view as guided by the corresponding 2D features. Finally, the two warped light fields are blended together to yield the desired light field morph. Two key issues in light field morphing are feature specification and warping of light field rays. For feature specification, we introduce a user interface for delineating 2D features in key views of a light field, which are automatically interpolated to other views. For ray warping, we describe a 2D technique that accounts for visibility changes and present a comparison to the ideal morphing of light fields. Light field morphing based on 2D features makes it simple to incorporate previous image morphing techniques such as nonuniform blending, as well as to morph between an image and a light field. PMID:15631126

  4. 2D materials for nanophotonic devices

    NASA Astrophysics Data System (ADS)

    Xu, Renjing; Yang, Jiong; Zhang, Shuang; Pei, Jiajie; Lu, Yuerui

    2015-12-01

    Two-dimensional (2D) materials have become very important building blocks for electronic, photonic, and phononic devices. The 2D material family has four key members, including the metallic graphene, transition metal dichalcogenide (TMD) layered semiconductors, semiconducting black phosphorous, and the insulating h-BN. Owing to the strong quantum confinements and defect-free surfaces, these atomically thin layers have offered us perfect platforms to investigate the interactions among photons, electrons and phonons. The unique interactions in these 2D materials are very important for both scientific research and application engineering. In this talk, I would like to briefly summarize and highlight the key findings, opportunities and challenges in this field. Next, I will introduce/highlight our recent achievements. We demonstrated atomically thin micro-lens and gratings using 2D MoS2, which is the thinnest optical component around the world. These devices are based on our discovery that the elastic light-matter interactions in highindex 2D materials is very strong. Also, I would like to introduce a new two-dimensional material phosphorene. Phosphorene has strongly anisotropic optical response, which creates 1D excitons in a 2D system. The strong confinement in phosphorene also enables the ultra-high trion (charged exciton) binding energies, which have been successfully measured in our experiments. Finally, I will briefly talk about the potential applications of 2D materials in energy harvesting.

  5. Inertial solvation in femtosecond 2D spectra

    NASA Astrophysics Data System (ADS)

    Hybl, John; Albrecht Ferro, Allison; Farrow, Darcie; Jonas, David

    2001-03-01

    We have used 2D Fourier transform spectroscopy to investigate polar solvation. 2D spectroscopy can reveal molecular lineshapes beneath ensemble averaged spectra and freeze molecular motions to give an undistorted picture of the microscopic dynamics of polar solvation. The transition from "inhomogeneous" to "homogeneous" 2D spectra is governed by both vibrational relaxation and solvent motion. Therefore, the time dependence of the 2D spectrum directly reflects the total response of the solvent-solute system. IR144, a cyanine dye with a dipole moment change upon electronic excitation, was used to probe inertial solvation in methanol and propylene carbonate. Since the static Stokes' shift of IR144 in each of these solvents is similar, differences in the 2D spectra result from solvation dynamics. Initial results indicate that the larger propylene carbonate responds more slowly than methanol, but appear to be inconsistent with rotational estimates of the inertial response. To disentangle intra-molecular vibrations from solvent motion, the 2D spectra of IR144 will be compared to the time-dependent 2D spectra of the structurally related nonpolar cyanine dye HDITCP.

  6. Internal Photoemission Spectroscopy of 2-D Materials

    NASA Astrophysics Data System (ADS)

    Nguyen, Nhan; Li, Mingda; Vishwanath, Suresh; Yan, Rusen; Xiao, Shudong; Xing, Huili; Cheng, Guangjun; Hight Walker, Angela; Zhang, Qin

    Recent research has shown the great benefits of using 2-D materials in the tunnel field-effect transistor (TFET), which is considered a promising candidate for the beyond-CMOS technology. The on-state current of TFET can be enhanced by engineering the band alignment of different 2D-2D or 2D-3D heterostructures. Here we present the internal photoemission spectroscopy (IPE) approach to determine the band alignments of various 2-D materials, in particular SnSe2 and WSe2, which have been proposed for new TFET designs. The metal-oxide-2-D semiconductor test structures are fabricated and characterized by IPE, where the band offsets from the 2-D semiconductor to the oxide conduction band minimum are determined by the threshold of the cube root of IPE yields as a function of photon energy. In particular, we find that SnSe2 has a larger electron affinity than most semiconductors and can be combined with other semiconductors to form near broken-gap heterojunctions with low barrier heights which can produce a higher on-state current. The details of data analysis of IPE and the results from Raman spectroscopy and spectroscopic ellipsometry measurements will also be presented and discussed.

  7. Evaluation of cardiac output by 5 arterial pulse contour techniques using trend interchangeability method.

    PubMed

    Fischer, Marc-Olivier; Diouf, Momar; Wilde, Robert B P de; Dupont, Hervé; Hanouz, Jean-Luc; Lorne, Emmanuel

    2016-06-01

    Cardiac output measurement with pulse contour analysis is a continuous, mini-invasive, operator-independent, widely used, and cost-effective technique, which could be helpful to assess changes in cardiac output. The 4-quadrant plot and the polar plot have been described to compare the changes between 2 measurements performed under different conditions, and the direction of change by using different methods of measurements. However, the 4-quadrant plot and the polar plot present a number of limitations, with a risk of misinterpretation in routine clinical practice. We describe a new trend interchangeability method designed to objectively define the interchangeability of each change of a variable. Using the repeatability of the reference method, we classified each change as either uninterpretable or interpretable and then as either noninterchangeable, in the gray zone or interchangeable. An interchangeability rate can then be calculated by the number of interchangeable changes divided by the total number of interpretable changes. In this observational study, we used this objective method to assess cardiac output changes with 5 arterial pulse contour techniques (Wesseling's method, LiDCO, PiCCO, Hemac method, and Modelflow) in comparison with bolus thermodilution technique as reference method in 24 cardiac surgery patients. A total of 172 cardiac output variations were available from the 199 data points: 88 (51%) were uninterpretable, according to the first step of the method. The second step of the method, based on the 84 (49%) interpretable variations, showed that only 18 (21%) to 30 (36%) variations were interchangeable regardless of the technique used. None of pulse contour cardiac output technique could be interchangeable with bolus thermodilution to assess changes in cardiac output using the trend interchangeability method in cardiac surgery patients. Future studies may consider using this method to assess interchangeability of changes between different methods

  8. Coding Long Contour Shapes of Binary Objects

    NASA Astrophysics Data System (ADS)

    Sánchez-Cruz, Hermilo; Rodríguez-Díaz, Mario A.

    This is an extension of the paper appeared in [15]. This time, we compare four methods: Arithmetic coding applied to 3OT chain code (Arith-3OT), Arithmetic coding applied to DFCCE (Arith-DFCCE), Huffman coding applied to DFCCE chain code (Huff-DFCCE), and, to measure the efficiency of the chain codes, we propose to compare the methods with JBIG, which constitutes an international standard. In the aim to look for a suitable and better representation of contour shapes, our probes suggest that a sound method to represent contour shapes is 3OT, because Arithmetic coding applied to it gives the best results regarding JBIG, independently of the perimeter of the contour shapes.

  9. Modified contour-improved perturbation theory

    SciTech Connect

    Cvetic, Gorazd; Loewe, Marcelo; Martinez, Cristian; Valenzuela, Cristian

    2010-11-01

    The semihadronic tau decay width allows a clean extraction of the strong coupling constant at low energies. We present a modification of the standard ''contour-improved'' method based on a derivative expansion of the Adler function. The new approach has some advantages compared to contour-improved perturbation theory. The renormalization scale dependence is weaker by more than a factor of 2 and the last term of the expansion is reduced by about 10%, while the renormalization scheme dependence remains approximately equal. The extracted QCD coupling at the tau mass scale is by 2% lower than the contour-improved value. We find {alpha}{sub s}(M{sub Z}{sup 2})=0.1211{+-}0.0010.

  10. Adding stress plot function to NASTRAN

    NASA Technical Reports Server (NTRS)

    Katoh, S.

    1978-01-01

    Stress plot function was developed and added to the NASTRAN level 15.5. Computed stress distribution can be displayed by this function, with vectors showing the principal stresses of the finite elements over the specified portions of the structure. NASTRAN is reviewed in the aspect of plotting capabilities. Stress tensor field is examined in preparation of stress display. Then the stress plot function as added to the NASTRAN is described. A sample plotout by this function is shown.

  11. Brittle damage models in DYNA2D

    SciTech Connect

    Faux, D.R.

    1997-09-01

    DYNA2D is an explicit Lagrangian finite element code used to model dynamic events where stress wave interactions influence the overall response of the system. DYNA2D is often used to model penetration problems involving ductile-to-ductile impacts; however, with the advent of the use of ceramics in the armor-anti-armor community and the need to model damage to laser optics components, good brittle damage models are now needed in DYNA2D. This report will detail the implementation of four brittle damage models in DYNA2D, three scalar damage models and one tensor damage model. These new brittle damage models are then used to predict experimental results from three distinctly different glass damage problems.

  12. Matrix models of 2d gravity

    SciTech Connect

    Ginsparg, P.

    1991-01-01

    These are introductory lectures for a general audience that give an overview of the subject of matrix models and their application to random surfaces, 2d gravity, and string theory. They are intentionally 1.5 years out of date.

  13. Matrix models of 2d gravity

    SciTech Connect

    Ginsparg, P.

    1991-12-31

    These are introductory lectures for a general audience that give an overview of the subject of matrix models and their application to random surfaces, 2d gravity, and string theory. They are intentionally 1.5 years out of date.

  14. 2D electronic materials for army applications

    NASA Astrophysics Data System (ADS)

    O'Regan, Terrance; Perconti, Philip

    2015-05-01

    The record electronic properties achieved in monolayer graphene and related 2D materials such as molybdenum disulfide and hexagonal boron nitride show promise for revolutionary high-speed and low-power electronic devices. Heterogeneous 2D-stacked materials may create enabling technology for future communication and computation applications to meet soldier requirements. For instance, transparent, flexible and even wearable systems may become feasible. With soldier and squad level electronic power demands increasing, the Army is committed to developing and harnessing graphene-like 2D materials for compact low size-weight-and-power-cost (SWAP-C) systems. This paper will review developments in 2D electronic materials at the Army Research Laboratory over the last five years and discuss directions for future army applications.

  15. Contour-based classification of video objects

    NASA Astrophysics Data System (ADS)

    Richter, Stephan; Kuehne, Gerald; Schuster, Oliver

    2000-12-01

    The recognition of objects that appear in a video sequence is an essential aspect of any video content analysis system. We present an approach which classifies a segmented video object base don its appearance in successive video frames. The classification is performed by matching curvature features of the contours of these object views to a database containing preprocessed views of prototypical objects using a modified curvature scale space technique. By integrating the result of an umber of successive frames and by using the modified curvature scale space technique as an efficient representation of object contours, our approach enables the robust, tolerant and rapid object classification of video objects.

  16. Contour-based classification of video objects

    NASA Astrophysics Data System (ADS)

    Richter, Stephan; Kuehne, Gerald; Schuster, Oliver

    2001-01-01

    The recognition of objects that appear in a video sequence is an essential aspect of any video content analysis system. We present an approach which classifies a segmented video object base don its appearance in successive video frames. The classification is performed by matching curvature features of the contours of these object views to a database containing preprocessed views of prototypical objects using a modified curvature scale space technique. By integrating the result of an umber of successive frames and by using the modified curvature scale space technique as an efficient representation of object contours, our approach enables the robust, tolerant and rapid object classification of video objects.

  17. Leaf Shape Recognition using Centroid Contour Distance

    NASA Astrophysics Data System (ADS)

    Hasim, Abdurrasyid; Herdiyeni, Yeni; Douady, Stephane

    2016-01-01

    This research recognizes the leaf shape using Centroid Contour Distance (CCD) as shape descriptor. CCD is an algorithm of shape representation contour-based approach which only exploits boundary information. CCD calculates the distance between the midpoint and the points on the edge corresponding to interval angle. Leaf shapes that included in this study are ellips, cordate, ovate, and lanceolate. We analyzed 200 leaf images of tropical plant. Each class consists of 50 images. The best accuracy is obtained by 96.67%. We used Probabilistic Neural Network to classify the leaf shape. Experimental results demonstrated the effectiveness of the proposed approach for shape recognition with high accuracy.

  18. Robot Hand Would Adapt To Contours

    NASA Technical Reports Server (NTRS)

    Collins, Earl R., Jr.

    1990-01-01

    Conceptual device uses hydraulic pressure to activate fingers. Projections on opposing fingers of proposed robot hand automatically conform to contours of object on contact. Pistons connected to common reservoir provide gentle, firm grip. Fingers communicate with each other via hydraulic pressure, without elaborate control system. Pistons move in and out, and tips slope to match contour of object. Their action tends to center object on finger. Hand used to grasp objects of various shapes and sizes. Conforming process passive; pressure of object on one or several pad elements forces other pad elements to touch it. Would not use elaborate mechanisms involving motors, cams, and cables.

  19. Chemical Approaches to 2D Materials.

    PubMed

    Samorì, Paolo; Palermo, Vincenzo; Feng, Xinliang

    2016-08-01

    Chemistry plays an ever-increasing role in the production, functionalization, processing and applications of graphene and other 2D materials. This special issue highlights a selection of enlightening chemical approaches to 2D materials, which nicely reflect the breadth of the field and convey the excitement of the individuals involved in it, who are trying to translate graphene and related materials from the laboratory into a real, high-impact technology. PMID:27478083

  20. Xplot: XY plotting software for Sun Workstations

    SciTech Connect

    Hess, B.V.

    1991-06-01

    A user friendly XY plotting package for Sun Workstations has been developed. Xplot is X-windows based and Open Look compliant. Running under an Open Look window manager, it supports the Drag Drop metaphor allowing the user to simply drag and drop a file icon into the plot window to create XY plots of multi-column ASCII data files. It supports color and monochrome PostScript hardcopy and re-sizeable windows. It has been designed to provide simple XY plots with minimal effort from the user. 7 figs.

  1. An Excel macro for generating trilinear plots.

    PubMed

    Shikaze, Steven G; Crowe, Allan S

    2007-01-01

    This computer note describes a method for creating trilinear plots in Microsoft Excel. Macros have been created in MS Excel's internal language: Visual Basic for Applications (VBA). A simple form has been set up to allow the user to input data from an Excel worksheet. The VBA macro is used to convert the triangular data (which consist of three columns of percentage data) into X-Y data. The macro then generates the axes, labels, and grid for the trilinear plot. The X-Y data are plotted as scatter data in Excel. By providing this macro in Excel, users can create trilinear plots in a quick, inexpensive manner. PMID:17257347

  2. 2D magnetic nanoparticle imaging using magnetization response second harmonic

    NASA Astrophysics Data System (ADS)

    Tanaka, Saburo; Murata, Hayaki; Oishi, Tomoya; Suzuki, Toshifumi; Zhang, Yi

    2015-06-01

    A detection method and an imaging technique for magnetic nanoparticles (MNPs) have been investigated. In MNP detection and in magnetic particle imaging (MPI), the most commonly employed method is the detection of the odd harmonics of the magnetization response. We examined the advantage of using the second harmonic response when applying an AC magnetic modulation field and a DC bias field. If the magnetization response is detected by a Cu-wound-coil detection system, the output voltage from the coil is proportional to the change in the flux, dϕ/dt. Thus, the dependence of the derivative of the magnetization, M, on an AC magnetic modulation field and a DC bias field were calculated and investigated. The calculations were in good agreement with the experimental results. We demonstrated that the use of the second harmonic response for the detection of MNPs has an advantage compared with the usage of the third harmonic response, when the Cu-wound-coil detection system is employed and the amplitude of the ratio of the AC modulation field and a knee field Hac/Hk is less than 2. We also constructed a 2D MPI scanner using a pair of permanent ring magnets with a bore of ϕ80 mm separated by 90 mm. The magnets generated a gradient of Gz=3.17 T/m transverse to the imaging bore and Gx=1.33 T/m along the longitudinal axis. An original concentrated 10 μl Resovist solution in a ϕ2×3 mm2 vessel was used as a sample, and it was imaged by the scanner. As a result, a 2D contour map image could be successfully generated using the method with a lock-in amplifier.

  3. Extended 2D generalized dilaton gravity theories

    NASA Astrophysics Data System (ADS)

    de Mello, R. O.

    2008-09-01

    We show that an anomaly-free description of matter in (1+1) dimensions requires a deformation of the 2D relativity principle, which introduces a non-trivial centre in the 2D Poincaré algebra. Then we work out the reduced phase space of the anomaly-free 2D relativistic particle, in order to show that it lives in a noncommutative 2D Minkowski space. Moreover, we build a Gaussian wave packet to show that a Planck length is well defined in two dimensions. In order to provide a gravitational interpretation for this noncommutativity, we propose to extend the usual 2D generalized dilaton gravity models by a specific Maxwell component, which guages the extra symmetry associated with the centre of the 2D Poincaré algebra. In addition, we show that this extension is a high energy correction to the unextended dilaton theories that can affect the topology of spacetime. Further, we couple a test particle to the general extended dilaton models with the purpose of showing that they predict a noncommutativity in curved spacetime, which is locally described by a Moyal star product in the low energy limit. We also conjecture a probable generalization of this result, which provides strong evidence that the noncommutativity is described by a certain star product which is not of the Moyal type at high energies. Finally, we prove that the extended dilaton theories can be formulated as Poisson Sigma models based on a nonlinear deformation of the extended Poincaré algebra.

  4. Segmentation of urinary bladder in CT urography (CTU) using CLASS with enhanced contour conjoint procedure

    NASA Astrophysics Data System (ADS)

    Cha, Kenny; Hadjiiski, Lubomir; Chan, Heang-Ping; Cohan, Richard H.; Caoili, Elaine M.; Zhou, Chuan

    2014-03-01

    We are developing a computerized method for bladder segmentation in CT urography (CTU) for computeraided diagnosis of bladder cancer. A challenge for computerized bladder segmentation in CTU is that the bladder often contains regions filled with intravenous (IV) contrast and without contrast. Previously, we proposed a Conjoint Level set Analysis and Segmentation System (CLASS) consisting of four stages: preprocessing and initial segmentation, 3D and 2D level set segmentation, and post-processing. In case the bladder is partially filled with contrast, CLASS segments the non-contrast (NC) region and the contrast (C) filled region separately and conjoins the contours with a Contour Conjoint Procedure (CCP). The CCP is not trivial. Inaccuracies in the NC and C contours may cause CCP to exclude portions of the bladder. To alleviate this problem, we implemented model-guided refinement to propagate the C contour if the level set propagation in the region stops prematurely due to substantial non-uniformity of the contrast. An enhanced CCP with regularized energies further propagates the conjoint contours to the correct bladder boundary. Segmentation performance was evaluated using 70 cases. For all cases, 3D hand segmented contours were obtained as reference standard, and computerized segmentation accuracy was evaluated in terms of average volume intersection %, average % volume error, and average minimum distance. With enhanced CCP, those values were 84.4±10.6%, 8.3±16.1%, 3.4±1.8 mm, respectively. With CLASS, those values were 74.6±13.1%, 19.6±18.6%, 4.4±2.2 mm, respectively. The enhanced CCP improved bladder segmentation significantly (p<0.001) for all three performance measures.

  5. Gaining a Better Understanding of Estuarine Circulation and Improving Data Visualization Skills Through a Hands-on Contouring Exercise

    NASA Astrophysics Data System (ADS)

    Mailloux, B. J.; Kenna, T. C.

    2008-12-01

    The creation and accurate interpretation of graphs is becoming a lost art among students. The availability of numerous graphing software programs makes the act of graphing data easy but does not necessarily aide students in interpreting complex visual data. This is especially true for contour maps; which have become a critical skill in the earth sciences and everyday life. In multiple classes, we have incorporated a large-scale, hands-on, contouring exercise of temperature, salinity, and density data collected in the Hudson River Estuary. The exercise allows students to learn first-hand how to plot, analyze, and present three dimensional data. As part of a day-long sampling expedition aboard an 80' research vessel, students deploy a water profiling instrument (Seabird CTD). Data are collected along a transect between the Verrazano and George Washington Bridges. The data are then processed and binned at 0.5 meter intervals. The processed data is then used during a later laboratory period for the contouring exercise. In class, students work in groups of 2 to 4 people and are provided with the data, a set of contouring instructions, a piece of large (3' x 3') graph paper, a ruler, and a set of colored markers. We then let the groups work together to determine the details of the graphs. Important steps along the way are talking to the students about X and Y scales, interpolation, and choices of contour intervals and colors. Frustration and bottlenecks are common at the beginning when students are unsure how to even begin with the raw data. At some point during the exercise, students start to understand the contour concept and each group usually produces a finished contour map in an hour or so. Interestingly, the groups take pride in the coloring portion of the contouring as it indicates successful interpretation of the data. The exercise concludes with each group presenting and discussing their contour plot. In almost every case, the hands-on graphing has improved the

  6. Apparatus for electrolytically tapered or contoured cavities

    NASA Technical Reports Server (NTRS)

    Williams, L. A. (Inventor)

    1967-01-01

    An electrolytic machining apparatus for forming tapered or contoured cavities in an electrically conductive and electrochemically erodible piece is presented. It supports the workpiece and an electrode for movement relatively toward each other and has means for pumping an electrolyte between the workpiece and the electrode.

  7. Improved discrimination in photographic density contouring

    NASA Technical Reports Server (NTRS)

    Godding, R. A.

    1974-01-01

    Density discrimination can be accomplished through use of special photographic contouring material which has two sensitive layers (one negative, one positive) on single support. Process will be of interest to investigators who require finer discrimination of densities of original photograph for purposes such as identification of crops and analysis of energy levels of radiating objects.

  8. Automatic Contour Tracking in Ultrasound Images

    ERIC Educational Resources Information Center

    Li, Min; Kambhamettu, Chandra; Stone, Maureen

    2005-01-01

    In this paper, a new automatic contour tracking system, EdgeTrak, for the ultrasound image sequences of human tongue is presented. The images are produced by a head and transducer support system (HATS). The noise and unrelated high-contrast edges in ultrasound images make it very difficult to automatically detect the correct tongue surfaces. In…

  9. Expectations for Melodic Contours Transcend Pitch

    PubMed Central

    Graves, Jackson E.; Micheyl, Christophe; Oxenham, Andrew J.

    2015-01-01

    The question of what makes a good melody has interested composers, music theorists, and psychologists alike. Many of the observed principles of good “melodic continuation” involve melodic contour – the pattern of rising and falling pitch within a sequence. Previous work has shown that contour perception can extend beyond pitch to other auditory dimensions, such as brightness and loudness. Here, we show with two experiments that the generalization of contour perception to non-traditional dimensions also extends to melodic expectations. In the first experiment, subjective ratings for three-tone sequences that vary in brightness or loudness conformed to the same general contour-based expectations as pitch sequences. In the second experiment, we modified the sequence of melody presentation such that melodies with the same beginning were blocked together. This change produced substantively different results, but the patterns of ratings remained similar across the three auditory dimensions. Taken together, these results suggest that 1) certain well-known principles of melodic expectation (such as the expectation for a reversal following a skip) are dependent on long-term context, and 2) these expectations are not unique to the dimension of pitch and may instead reflect more general principles of perceptual organization. PMID:25365571

  10. Expectations for melodic contours transcend pitch.

    PubMed

    Graves, Jackson E; Micheyl, Christophe; Oxenham, Andrew J

    2014-12-01

    The question of what makes a good melody has interested composers, music theorists, and psychologists alike. Many of the observed principles of good "melodic continuation" involve melodic contour-the pattern of rising and falling pitch within a sequence. Previous work has shown that contour perception can extend beyond pitch to other auditory dimensions, such as brightness and loudness. Here, we show that the generalization of contour perception to nontraditional dimensions also extends to melodic expectations. In the first experiment, subjective ratings for 3-tone sequences that vary in brightness or loudness conformed to the same general contour-based expectations as pitch sequences. In the second experiment, we modified the sequence of melody presentation such that melodies with the same beginning were blocked together. This change produced substantively different results, but the patterns of ratings remained similar across the 3 auditory dimensions. Taken together, these results suggest that (a) certain well-known principles of melodic expectation (such as the expectation for a reversal following a skip) are dependent on long-term context, and (b) these expectations are not unique to the dimension of pitch and may instead reflect more general principles of perceptual organization. PMID:25365571

  11. Contoured Orifice for Silicon-Ribbon Die

    NASA Technical Reports Server (NTRS)

    Mackintosh, B. H.

    1985-01-01

    Die configuration encourages purity and stable growth. Contour of die orifice changes near ribbon edges. As result, silicon ribbon has nearly constant width and little carbon contamination. Die part of furnace being developed to produce high-quality, low-cost material for solar cells.

  12. Vascular active contour for vessel tree segmentation.

    PubMed

    Shang, Yanfeng; Deklerck, Rudi; Nyssen, Edgard; Markova, Aneta; de Mey, Johan; Yang, Xin; Sun, Kun

    2011-04-01

    In this paper, a novel active contour model is proposed for vessel tree segmentation. First, we introduce a region competition-based active contour model exploiting the gaussian mixture model, which mainly segments thick vessels. Second, we define a vascular vector field to evolve the active contour along its center line into the thin and weak vessels. The vector field is derived from the eigenanalysis of the Hessian matrix of the image intensity in a multiscale framework. Finally, a dual curvature strategy, which uses a vesselness measure-dependent function selecting between a minimal principal curvature and a mean curvature criterion, is added to smoothen the surface of the vessel without changing its shape. The developed model is used to extract the liver and lung vessel tree as well as the coronary artery from high-resolution volumetric computed tomography images. Comparisons are made with several classical active contour models and manual extraction. The experiments show that our model is more accurate and robust than these classical models and is, therefore, more suited for automatic vessel tree extraction. PMID:21138795

  13. A Computer Language for ECG Contour Analysis

    PubMed Central

    McConnochie, John W.

    1982-01-01

    The purpose of this paper is to demonstrate contructively that criteria for ECG contour analysis can be interpreted directly by a computer. Thereby, the programming task is greatly reduced. Direct interpretation is achieved by the creation of a computer language that is well-suited for the expression of such criteria. Further development of the language is planned.

  14. Localizing Region-Based Active Contours

    PubMed Central

    Lankton, Shawn; Tannenbaum, Allen

    2009-01-01

    In this paper, we propose a natural framework that allows any region-based segmentation energy to be re-formulated in a local way. We consider local rather than global image statistics and evolve a contour based on local information. Localized contours are capable of segmenting objects with heterogeneous feature profiles that would be difficult to capture correctly using a standard global method. The presented technique is versatile enough to be used with any global region-based active contour energy and instill in it the benefits of localization. We describe this framework and demonstrate the localization of three well-known energies in order to illustrate how our framework can be applied to any energy. We then compare each localized energy to its global counterpart to show the improvements that can be achieved. Next, an in-depth study of the behaviors of these energies in response to the degree of localization is given. Finally, we show results on challenging images to illustrate the robust and accurate segmentations that are possible with this new class of active contour models. PMID:18854247

  15. Contour completion through depth interferes with stereoacuity

    NASA Technical Reports Server (NTRS)

    Vreven, Dawn; McKee, Suzanne P.; Verghese, Preeti

    2002-01-01

    Local disparity signals must interact in visual cortex to represent boundaries and surfaces of three-dimensional (3D) objects. We investigated how disparity signals interact in 3D contours and in 3D surfaces generated from the contours. We compared flat (single disparity) stimuli with curved (multi-disparity) stimuli. We found no consistent differences in sensitivity to contours vs. surfaces; for equivalent amounts of disparity, however, observers were more sensitive to flat stimuli than curved stimuli. Poor depth sensitivity for curved stimuli cannot be explained by the larger range of disparities present in the curved surface, nor by disparity averaging, nor by poor sensitivity to the largest disparity in the stimulus. Surprisingly, sensitivity to surfaces curved in depth was improved by removing portions of the surface and thus removing disparity information. Stimulus configuration had a profound effect on stereo thresholds that cannot be accounted for by disparity-energy models of V1 processing. We suggest that higher-level 3D contour or 3D shape mechanisms are involved.

  16. Molding Compound For Inspection Of Internal Contours

    NASA Technical Reports Server (NTRS)

    Adams, Jim; Ricklefs, Steve

    1988-01-01

    Material clean, sets rapidly, and easy to use. Silicone elastomer, Citrocon or equivalent, commonly used in dentistry, in combination with mold-release agent (Also see MFS-29240), speeds and facilitates making of impressions of interior surfaces so surface contours examined. Elastomer easily moved around in cavity until required location found.

  17. Aircraft noise source and contour estimation

    NASA Technical Reports Server (NTRS)

    Dunn, D. G.; Peart, N. A.

    1973-01-01

    Calculation procedures are presented for predicting the noise-time histories and noise contours (footprints) of five basic types of aircraft; turbojet, turofan, turboprop, V/STOL, and helicopter. The procedures have been computerized to facilitate prediction of the noise characteristics during takeoffs, flyovers, and/or landing operations.

  18. Contour-measuring tool for composite layups

    NASA Technical Reports Server (NTRS)

    Fontes, M. J.

    1981-01-01

    Simple handtool helps form contours and complex shapes from laminae of resin-impregnated fabric. Tool, which consists of yoke having ballpoint pen and spindle and gage, is placed so that it straddles model. As toll is moved, pen draws constant thickness focus that is used as template.

  19. Camera Would Monitor Weld-Pool Contours

    NASA Technical Reports Server (NTRS)

    Gordon, Stephen S.; Gutow, David A.

    1990-01-01

    Weld pool illuminated and viewed coaxially along welding torch. Proposed monitoring subsystem for arc welder provides image in which horizontal portions of surface of weld pool highlighted. Monitoring and analyzing subsystems integrated into overall control system of robotic welder. Control system sets welding parameters to adapt to changing conditions, maintaining surface contour giving desired pattern of reflections.

  20. Interactive Visualizations of Plot in Fiction

    ERIC Educational Resources Information Center

    Dobson, Teresa; Michura, Piotr; Ruecker, Stan; Brown, Monica; Rodriguez, Omar

    2011-01-01

    In this paper, we expand on our presentation at ICDS2010 (Dobson et al., 2010) in describing the design of several new forms of interactive visualization intended for teaching the concept of plot in fiction. The most common visualization currently used for teaching plot is a static diagram known as Freytag's Pyramid, which was initially intended…

  1. The Heuristic Interpretation of Box Plots

    ERIC Educational Resources Information Center

    Lem, Stephanie; Onghena, Patrick; Verschaffel, Lieven; Van Dooren, Wim

    2013-01-01

    Box plots are frequently used, but are often misinterpreted by students. Especially the area of the box in box plots is often misinterpreted as representing number or proportion of observations, while it actually represents their density. In a first study, reaction time evidence was used to test whether heuristic reasoning underlies this…

  2. Reaction Order Ambiguity in Integrated Rate Plots

    ERIC Educational Resources Information Center

    Lee, Joe

    2008-01-01

    Integrated rate plots are frequently used in reaction kinetics to determine orders of reactions. It is often emphasised, when using this methodology in practice, that it is necessary to monitor the reaction to a substantial fraction of completion for these plots to yield unambiguous orders. The present article gives a theoretical and statistical…

  3. Box Plots in the Australian Curriculum

    ERIC Educational Resources Information Center

    Watson, Jane M.

    2012-01-01

    This article compares the definition of "box plot" as used in the "Australian Curriculum: Mathematics" with other definitions used in the education community; describes the difficulties students experience when dealing with box plots; and discusses the elaboration that is necessary to enable teachers to develop the knowledge necessary to use them…

  4. Melodic Contour Identification by Cochlear Implant Listeners

    PubMed Central

    Galvin, John J.; Fu, Qian-Jie; Nogaki, Geraldine

    2013-01-01

    Objective While the cochlear implant provides many deaf patients with good speech understanding in quiet, music perception and appreciation with the cochlear implant remains a major challenge for most cochlear implant users. The present study investigated whether a closed-set melodic contour identification (MCI) task could be used to quantify cochlear implant users’ ability to recognize musical melodies and whether MCI performance could be improved with moderate auditory training. The present study also compared MCI performance with familiar melody identification (FMI) performance, with and without MCI training. Methods For the MCI task, test stimuli were melodic contours composed of 5 notes of equal duration whose frequencies corresponded to musical intervals. The interval between successive notes in each contour was varied between 1 and 5 semitones; the “root note” of the contours was also varied (A3, A4, and A5). Nine distinct musical patterns were generated for each interval and root note condition, resulting in a total of 135 musical contours. The identification of these melodic contours was measured in 11 cochlear implant users. FMI was also evaluated in the same subjects; recognition of 12 familiar melodies was tested with and without rhythm cues. MCI was also trained in 6 subjects, using custom software and melodic contours presented in a different frequency range from that used for testing. Results Results showed that MCI recognition performance was highly variable among cochlear implant users, ranging from 14% to 91% correct. For most subjects, MCI performance improved as the number of semitones between successive notes was increased; performance was slightly lower for the A3 root note condition. Mean FMI performance was 58% correct when rhythm cues were preserved and 29% correct when rhythm cues were removed. Statistical analyses revealed no significant correlation between MCI performance and FMI performance (with or without rhythmic cues). However

  5. Optical properties of GaAs 2D hexagonal and cubic photonic crystal

    SciTech Connect

    Arab, F. Assali, A.; Grain, R.; Kanouni, F.

    2015-03-30

    In this paper we present our theoretical study of 2D hexagonal and cubic rods GaAs in air, with plan wave expansion (PWE) and finite difference time domain (FDTD) by using BandSOLVE and FullWAVE of Rsoft photonic CAD package. In order to investigate the effect of symmetry and radius, we performed calculations of the band structures for both TM and TE polarization, contour and electromagnetic propagation and transmission spectra. Our calculations show that the hexagonal structure gives a largest band gaps compare to cubic one for a same filling factor.

  6. 2D-CELL: image processing software for extraction and analysis of 2-dimensional cellular structures

    NASA Astrophysics Data System (ADS)

    Righetti, F.; Telley, H.; Leibling, Th. M.; Mocellin, A.

    1992-01-01

    2D-CELL is a software package for the processing and analyzing of photographic images of cellular structures in a largely interactive way. Starting from a binary digitized image, the programs extract the line network (skeleton) of the structure and determine the graph representation that best models it. Provision is made for manually correcting defects such as incorrect node positions or dangling bonds. Then a suitable algorithm retrieves polygonal contours which define individual cells — local boundary curvatures are neglected for simplicity. Using elementary analytical geometry relations, a range of metric and topological parameters describing the population are then computed, organized into statistical distributions and graphically displayed.

  7. GEO2D - Two-Dimensional Computer Model of a Ground Source Heat Pump System

    DOE Data Explorer

    James Menart

    2013-06-07

    This file contains a zipped file that contains many files required to run GEO2D. GEO2D is a computer code for simulating ground source heat pump (GSHP) systems in two-dimensions. GEO2D performs a detailed finite difference simulation of the heat transfer occurring within the working fluid, the tube wall, the grout, and the ground. Both horizontal and vertical wells can be simulated with this program, but it should be noted that the vertical wall is modeled as a single tube. This program also models the heat pump in conjunction with the heat transfer occurring. GEO2D simulates the heat pump and ground loop as a system. Many results are produced by GEO2D as a function of time and position, such as heat transfer rates, temperatures and heat pump performance. On top of this information from an economic comparison between the geothermal system simulated and a comparable air heat pump systems or a comparable gas, oil or propane heating systems with a vapor compression air conditioner. The version of GEO2D in the attached file has been coupled to the DOE heating and cooling load software called ENERGYPLUS. This is a great convenience for the user because heating and cooling loads are an input to GEO2D. GEO2D is a user friendly program that uses a graphical user interface for inputs and outputs. These make entering data simple and they produce many plotted results that are easy to understand. In order to run GEO2D access to MATLAB is required. If this program is not available on your computer you can download the program MCRInstaller.exe, the 64 bit version, from the MATLAB website or from this geothermal depository. This is a free download which will enable you to run GEO2D..

  8. Optical modulators with 2D layered materials

    NASA Astrophysics Data System (ADS)

    Sun, Zhipei; Martinez, Amos; Wang, Feng

    2016-04-01

    Light modulation is an essential operation in photonics and optoelectronics. With existing and emerging technologies increasingly demanding compact, efficient, fast and broadband optical modulators, high-performance light modulation solutions are becoming indispensable. The recent realization that 2D layered materials could modulate light with superior performance has prompted intense research and significant advances, paving the way for realistic applications. In this Review, we cover the state of the art of optical modulators based on 2D materials, including graphene, transition metal dichalcogenides and black phosphorus. We discuss recent advances employing hybrid structures, such as 2D heterostructures, plasmonic structures, and silicon and fibre integrated structures. We also take a look at the future perspectives and discuss the potential of yet relatively unexplored mechanisms, such as magneto-optic and acousto-optic modulation.

  9. Large Area Synthesis of 2D Materials

    NASA Astrophysics Data System (ADS)

    Vogel, Eric

    Transition metal dichalcogenides (TMDs) have generated significant interest for numerous applications including sensors, flexible electronics, heterostructures and optoelectronics due to their interesting, thickness-dependent properties. Despite recent progress, the synthesis of high-quality and highly uniform TMDs on a large scale is still a challenge. In this talk, synthesis routes for WSe2 and MoS2 that achieve monolayer thickness uniformity across large area substrates with electrical properties equivalent to geological crystals will be described. Controlled doping of 2D semiconductors is also critically required. However, methods established for conventional semiconductors, such as ion implantation, are not easily applicable to 2D materials because of their atomically thin structure. Redox-active molecular dopants will be demonstrated which provide large changes in carrier density and workfunction through the choice of dopant, treatment time, and the solution concentration. Finally, several applications of these large-area, uniform 2D materials will be described including heterostructures, biosensors and strain sensors.

  10. 2D microwave imaging reflectometer electronics

    SciTech Connect

    Spear, A. G.; Domier, C. W. Hu, X.; Muscatello, C. M.; Ren, X.; Luhmann, N. C.; Tobias, B. J.

    2014-11-15

    A 2D microwave imaging reflectometer system has been developed to visualize electron density fluctuations on the DIII-D tokamak. Simultaneously illuminated at four probe frequencies, large aperture optics image reflections from four density-dependent cutoff surfaces in the plasma over an extended region of the DIII-D plasma. Localized density fluctuations in the vicinity of the plasma cutoff surfaces modulate the plasma reflections, yielding a 2D image of electron density fluctuations. Details are presented of the receiver down conversion electronics that generate the in-phase (I) and quadrature (Q) reflectometer signals from which 2D density fluctuation data are obtained. Also presented are details on the control system and backplane used to manage the electronics as well as an introduction to the computer based control program.

  11. 2D microwave imaging reflectometer electronics

    NASA Astrophysics Data System (ADS)

    Spear, A. G.; Domier, C. W.; Hu, X.; Muscatello, C. M.; Ren, X.; Tobias, B. J.; Luhmann, N. C.

    2014-11-01

    A 2D microwave imaging reflectometer system has been developed to visualize electron density fluctuations on the DIII-D tokamak. Simultaneously illuminated at four probe frequencies, large aperture optics image reflections from four density-dependent cutoff surfaces in the plasma over an extended region of the DIII-D plasma. Localized density fluctuations in the vicinity of the plasma cutoff surfaces modulate the plasma reflections, yielding a 2D image of electron density fluctuations. Details are presented of the receiver down conversion electronics that generate the in-phase (I) and quadrature (Q) reflectometer signals from which 2D density fluctuation data are obtained. Also presented are details on the control system and backplane used to manage the electronics as well as an introduction to the computer based control program.

  12. 2D microwave imaging reflectometer electronics.

    PubMed

    Spear, A G; Domier, C W; Hu, X; Muscatello, C M; Ren, X; Tobias, B J; Luhmann, N C

    2014-11-01

    A 2D microwave imaging reflectometer system has been developed to visualize electron density fluctuations on the DIII-D tokamak. Simultaneously illuminated at four probe frequencies, large aperture optics image reflections from four density-dependent cutoff surfaces in the plasma over an extended region of the DIII-D plasma. Localized density fluctuations in the vicinity of the plasma cutoff surfaces modulate the plasma reflections, yielding a 2D image of electron density fluctuations. Details are presented of the receiver down conversion electronics that generate the in-phase (I) and quadrature (Q) reflectometer signals from which 2D density fluctuation data are obtained. Also presented are details on the control system and backplane used to manage the electronics as well as an introduction to the computer based control program. PMID:25430247

  13. 2D-Crystal-Based Functional Inks.

    PubMed

    Bonaccorso, Francesco; Bartolotta, Antonino; Coleman, Jonathan N; Backes, Claudia

    2016-08-01

    The possibility to produce and process graphene, related 2D crystals, and heterostructures in the liquid phase makes them promising materials for an ever-growing class of applications as composite materials, sensors, in flexible optoelectronics, and energy storage and conversion. In particular, the ability to formulate functional inks with on-demand rheological and morphological properties, i.e., lateral size and thickness of the dispersed 2D crystals, is a step forward toward the development of industrial-scale, reliable, inexpensive printing/coating processes, a boost for the full exploitation of such nanomaterials. Here, the exfoliation strategies of graphite and other layered crystals are reviewed, along with the advances in the sorting of lateral size and thickness of the exfoliated sheets together with the formulation of functional inks and the current development of printing/coating processes of interest for the realization of 2D-crystal-based devices. PMID:27273554

  14. PLOT300: A Tektronics PLOT10 emulator for HP 9000 series 200/300 computers

    NASA Technical Reports Server (NTRS)

    Kjelgaard, Scott O.

    1988-01-01

    A software package which emulates the Tektronics PLOT10 Graphics package on Hewlett-Packard 9000 Series 200/300 computers is described. The Software is written in HP Rocky Mountain BASIC and can be run under BASIC revisions 3.0 and 4.0. Although this subroutine library emulates a subset of PLOT10, several subroutines have been added which enhance basic plot generation. Example codes using PLOT300 and descriptions of the subroutines are included in the text.

  15. Longitudinal strain bull's eye plot patterns in patients with cardiomyopathy and concentric left ventricular hypertrophy.

    PubMed

    Liu, Dan; Hu, Kai; Nordbeck, Peter; Ertl, Georg; Störk, Stefan; Weidemann, Frank

    2016-01-01

    Despite substantial advances in the imaging techniques and pathophysiological understanding over the last decades, identification of the underlying causes of left ventricular hypertrophy by means of echocardiographic examination remains a challenge in current clinical practice. The longitudinal strain bull's eye plot derived from 2D speckle tracking imaging offers an intuitive visual overview of the global and regional left ventricular myocardial function in a single diagram. The bull's eye mapping is clinically feasible and the plot patterns could provide clues to the etiology of cardiomyopathies. The present review summarizes the longitudinal strain, bull's eye plot features in patients with various cardiomyopathies and concentric left ventricular hypertrophy and the bull's eye plot features might serve as one of the cardiac workup steps on evaluating patients with left ventricular hypertrophy. PMID:27165726

  16. Prostate contours delineation using interactive directional active contours model and parametric shape prior model.

    PubMed

    Derraz, Foued; Forzy, Gérard; Delebarre, Arnaud; Taleb-Ahmed, Abdelmalik; Oussalah, Mourad; Peyrodie, Laurent; Verclytte, Sebastien

    2015-11-01

    Prostate contours delineation on Magnetic Resonance (MR) images is a challenging and important task in medical imaging with applications of guiding biopsy, surgery and therapy. While a fully automated method is highly desired for this application, it can be a very difficult task due to the structure and surrounding tissues of the prostate gland. Traditional active contours-based delineation algorithms are typically quite successful for piecewise constant images. Nevertheless, when MR images have diffuse edges or multiple similar objects (e.g. bladder close to prostate) within close proximity, such approaches have proven to be unsuccessful. In order to mitigate these problems, we proposed a new framework for bi-stage contours delineation algorithm based on directional active contours (DAC) incorporating prior knowledge of the prostate shape. We first explicitly addressed the prostate contour delineation problem based on fast globally DAC that incorporates both statistical and parametric shape prior model. In doing so, we were able to exploit the global aspects of contour delineation problem by incorporating a user feedback in contours delineation process where it is shown that only a small amount of user input can sometimes resolve ambiguous scenarios raised by DAC. In addition, once the prostate contours have been delineated, a cost functional is designed to incorporate both user feedback interaction and the parametric shape prior model. Using data from publicly available prostate MR datasets, which includes several challenging clinical datasets, we highlighted the effectiveness and the capability of the proposed algorithm. Besides, the algorithm has been compared with several state-of-the-art methods. PMID:26009857

  17. The 2D lingual appliance system.

    PubMed

    Cacciafesta, Vittorio

    2013-09-01

    The two-dimensional (2D) lingual bracket system represents a valuable treatment option for adult patients seeking a completely invisible orthodontic appliance. The ease of direct or simplified indirect bonding of 2D lingual brackets in combination with low friction mechanics makes it possible to achieve a good functional and aesthetic occlusion, even in the presence of a severe malocclusion. The use of a self-ligating bracket significantly reduces chair-side time for the orthodontist, and the low-profile bracket design greatly improves patient comfort. PMID:24005953

  18. Inkjet printing of 2D layered materials.

    PubMed

    Li, Jiantong; Lemme, Max C; Östling, Mikael

    2014-11-10

    Inkjet printing of 2D layered materials, such as graphene and MoS2, has attracted great interests for emerging electronics. However, incompatible rheology, low concentration, severe aggregation and toxicity of solvents constitute critical challenges which hamper the manufacturing efficiency and product quality. Here, we introduce a simple and general technology concept (distillation-assisted solvent exchange) to efficiently overcome these challenges. By implementing the concept, we have demonstrated excellent jetting performance, ideal printing patterns and a variety of promising applications for inkjet printing of 2D layered materials. PMID:25169938

  19. Measurement of 2D birefringence distribution

    NASA Astrophysics Data System (ADS)

    Noguchi, Masato; Ishikawa, Tsuyoshi; Ohno, Masahiro; Tachihara, Satoru

    1992-10-01

    A new measuring method of 2-D birefringence distribution has been developed. It has not been an easy job to get a birefringence distribution in an optical element with conventional ellipsometry because of its lack of scanning means. Finding an analogy between the rotating analyzer method in ellipsometry and the phase-shifting method in recently developed digital interferometry, we have applied the phase-shifting algorithm to ellipsometry, and have developed a new method that makes the measurement of 2-D birefringence distribution easy and possible. The system contains few moving parts, assuring reliability, and measures a large area of a sample at one time, making the measuring time very short.

  20. Real geographies and virtual landscapes: exploring the influence on place and space on mortality Lexis surfaces using shaded contour maps.

    PubMed

    Minton, Jonathan

    2014-07-01

    This paper describes how shaded contour plots, applied to mortality data from the Human Mortality Database, can be used to compare between nations, and start to tease out some of the ways that place and space matters. A number of shaded contour plots are presented, in order to describe the age, period and cohort effects which are apparent within them. They show variations between different subpopulations within the same nation, over time, and between nations. In illustrating these intra- and international variations in the patterns, we hope to encourage the development of hypotheses about the influence of such factors on mortality rates. We conclude with a brief discussion about how such hypotheses might be developed into statistical models, allowing for more rigourous testing of hypotheses and projection across time, place and space. PMID:25113591

  1. Automatic liver contouring for radiotherapy treatment planning.

    PubMed

    Li, Dengwang; Liu, Li; Kapp, Daniel S; Xing, Lei

    2015-10-01

    To develop automatic and efficient liver contouring software for planning 3D-CT and four-dimensional computed tomography (4D-CT) for application in clinical radiation therapy treatment planning systems.The algorithm comprises three steps for overcoming the challenge of similar intensities between the liver region and its surrounding tissues. First, the total variation model with the L1 norm (TV-L1), which has the characteristic of multi-scale decomposition and an edge-preserving property, is used for removing the surrounding muscles and tissues. Second, an improved level set model that contains both global and local energy functions is utilized to extract liver contour information sequentially. In the global energy function, the local correlation coefficient (LCC) is constructed based on the gray level co-occurrence matrix both of the initial liver region and the background region. The LCC can calculate the correlation of a pixel with the foreground and background regions, respectively. The LCC is combined with intensity distribution models to classify pixels during the evolutionary process of the level set based method. The obtained liver contour is used as the candidate liver region for the following step. In the third step, voxel-based texture characterization is employed for refining the liver region and obtaining the final liver contours.The proposed method was validated based on the planning CT images of a group of 25 patients undergoing radiation therapy treatment planning. These included ten lung cancer patients with normal appearing livers and ten patients with hepatocellular carcinoma or liver metastases. The method was also tested on abdominal 4D-CT images of a group of five patients with hepatocellular carcinoma or liver metastases. The false positive volume percentage, the false negative volume percentage, and the dice similarity coefficient between liver contours obtained by a developed algorithm and a current standard delineated by the expert group

  2. Automatic liver contouring for radiotherapy treatment planning

    NASA Astrophysics Data System (ADS)

    Li, Dengwang; Liu, Li; Kapp, Daniel S.; Xing, Lei

    2015-09-01

    To develop automatic and efficient liver contouring software for planning 3D-CT and four-dimensional computed tomography (4D-CT) for application in clinical radiation therapy treatment planning systems. The algorithm comprises three steps for overcoming the challenge of similar intensities between the liver region and its surrounding tissues. First, the total variation model with the L1 norm (TV-L1), which has the characteristic of multi-scale decomposition and an edge-preserving property, is used for removing the surrounding muscles and tissues. Second, an improved level set model that contains both global and local energy functions is utilized to extract liver contour information sequentially. In the global energy function, the local correlation coefficient (LCC) is constructed based on the gray level co-occurrence matrix both of the initial liver region and the background region. The LCC can calculate the correlation of a pixel with the foreground and background regions, respectively. The LCC is combined with intensity distribution models to classify pixels during the evolutionary process of the level set based method. The obtained liver contour is used as the candidate liver region for the following step. In the third step, voxel-based texture characterization is employed for refining the liver region and obtaining the final liver contours. The proposed method was validated based on the planning CT images of a group of 25 patients undergoing radiation therapy treatment planning. These included ten lung cancer patients with normal appearing livers and ten patients with hepatocellular carcinoma or liver metastases. The method was also tested on abdominal 4D-CT images of a group of five patients with hepatocellular carcinoma or liver metastases. The false positive volume percentage, the false negative volume percentage, and the dice similarity coefficient between liver contours obtained by a developed algorithm and a current standard delineated by the expert group

  3. A 2D driven 3D vessel segmentation algorithm for 3D digital subtraction angiography data.

    PubMed

    Spiegel, M; Redel, T; Struffert, T; Hornegger, J; Doerfler, A

    2011-10-01

    Cerebrovascular disease is among the leading causes of death in western industrial nations. 3D rotational angiography delivers indispensable information on vessel morphology and pathology. Physicians make use of this to analyze vessel geometry in detail, i.e. vessel diameters, location and size of aneurysms, to come up with a clinical decision. 3D segmentation is a crucial step in this pipeline. Although a lot of different methods are available nowadays, all of them lack a method to validate the results for the individual patient. Therefore, we propose a novel 2D digital subtraction angiography (DSA)-driven 3D vessel segmentation and validation framework. 2D DSA projections are clinically considered as gold standard when it comes to measurements of vessel diameter or the neck size of aneurysms. An ellipsoid vessel model is applied to deliver the initial 3D segmentation. To assess the accuracy of the 3D vessel segmentation, its forward projections are iteratively overlaid with the corresponding 2D DSA projections. Local vessel discrepancies are modeled by a global 2D/3D optimization function to adjust the 3D vessel segmentation toward the 2D vessel contours. Our framework has been evaluated on phantom data as well as on ten patient datasets. Three 2D DSA projections from varying viewing angles have been used for each dataset. The novel 2D driven 3D vessel segmentation approach shows superior results against state-of-the-art segmentations like region growing, i.e. an improvement of 7.2% points in precision and 5.8% points for the Dice coefficient. This method opens up future clinical applications requiring the greatest vessel accuracy, e.g. computational fluid dynamic modeling. PMID:21908904

  4. A 2D driven 3D vessel segmentation algorithm for 3D digital subtraction angiography data

    NASA Astrophysics Data System (ADS)

    Spiegel, M.; Redel, T.; Struffert, T.; Hornegger, J.; Doerfler, A.

    2011-10-01

    Cerebrovascular disease is among the leading causes of death in western industrial nations. 3D rotational angiography delivers indispensable information on vessel morphology and pathology. Physicians make use of this to analyze vessel geometry in detail, i.e. vessel diameters, location and size of aneurysms, to come up with a clinical decision. 3D segmentation is a crucial step in this pipeline. Although a lot of different methods are available nowadays, all of them lack a method to validate the results for the individual patient. Therefore, we propose a novel 2D digital subtraction angiography (DSA)-driven 3D vessel segmentation and validation framework. 2D DSA projections are clinically considered as gold standard when it comes to measurements of vessel diameter or the neck size of aneurysms. An ellipsoid vessel model is applied to deliver the initial 3D segmentation. To assess the accuracy of the 3D vessel segmentation, its forward projections are iteratively overlaid with the corresponding 2D DSA projections. Local vessel discrepancies are modeled by a global 2D/3D optimization function to adjust the 3D vessel segmentation toward the 2D vessel contours. Our framework has been evaluated on phantom data as well as on ten patient datasets. Three 2D DSA projections from varying viewing angles have been used for each dataset. The novel 2D driven 3D vessel segmentation approach shows superior results against state-of-the-art segmentations like region growing, i.e. an improvement of 7.2% points in precision and 5.8% points for the Dice coefficient. This method opens up future clinical applications requiring the greatest vessel accuracy, e.g. computational fluid dynamic modeling.

  5. Parallel stitching of 2D materials

    DOE PAGESBeta

    Ling, Xi; Wu, Lijun; Lin, Yuxuan; Ma, Qiong; Wang, Ziqiang; Song, Yi; Yu, Lili; Huang, Shengxi; Fang, Wenjing; Zhang, Xu; et al

    2016-01-27

    Diverse parallel stitched 2D heterostructures, including metal–semiconductor, semiconductor–semiconductor, and insulator–semiconductor, are synthesized directly through selective “sowing” of aromatic molecules as the seeds in the chemical vapor deposition (CVD) method. Lastly, the methodology enables the large-scale fabrication of lateral heterostructures, which offers tremendous potential for its application in integrated circuits.

  6. Parallel Stitching of 2D Materials.

    PubMed

    Ling, Xi; Lin, Yuxuan; Ma, Qiong; Wang, Ziqiang; Song, Yi; Yu, Lili; Huang, Shengxi; Fang, Wenjing; Zhang, Xu; Hsu, Allen L; Bie, Yaqing; Lee, Yi-Hsien; Zhu, Yimei; Wu, Lijun; Li, Ju; Jarillo-Herrero, Pablo; Dresselhaus, Mildred; Palacios, Tomás; Kong, Jing

    2016-03-01

    Diverse parallel stitched 2D heterostructures, including metal-semiconductor, semiconductor-semiconductor, and insulator-semiconductor, are synthesized directly through selective "sowing" of aromatic molecules as the seeds in the chemical vapor deposition (CVD) method. The methodology enables the large-scale fabrication of lateral heterostructures, which offers tremendous potential for its application in integrated circuits. PMID:26813882

  7. Baby universes in 2d quantum gravity

    NASA Astrophysics Data System (ADS)

    Ambjørn, Jan; Jain, Sanjay; Thorleifsson, Gudmar

    1993-06-01

    We investigate the fractal structure of 2d quantum gravity, both for pure gravity and for gravity coupled to multiple gaussian fields and for gravity coupled to Ising spins. The roughness of the surfaces is described in terms of baby universes and using numerical simulations we measure their distribution which is related to the string susceptibility exponent γstring.

  8. A contour-based approach to multisensor image registration.

    PubMed

    Li, H; Manjunath, B S; Mitra, S K

    1995-01-01

    Image registration is concerned with the establishment of correspondence between images of the same scene. One challenging problem in this area is the registration of multispectral/multisensor images. In general, such images have different gray level characteristics, and simple techniques such as those based on area correlations cannot be applied directly. On the other hand, contours representing region boundaries are preserved in most cases. The authors present two contour-based methods which use region boundaries and other strong edges as matching primitives. The first contour matching algorithm is based on the chain-code correlation and other shape similarity criteria such as invariant moments. Closed contours and the salient segments along the open contours are matched separately. This method works well for image pairs in which the contour information is well preserved, such as the optical images from Landsat and Spot satellites. For the registration of the optical images with synthetic aperture radar (SAR) images, the authors propose an elastic contour matching scheme based on the active contour model. Using the contours from the optical image as the initial condition, accurate contour locations in the SAR image are obtained by applying the active contour model. Both contour matching methods are automatic and computationally quite efficient. Experimental results with various kinds of image data have verified the robustness of the algorithms, which have outperformed manual registration in terms of root mean square error at the control points. PMID:18289982

  9. 47 CFR 73.311 - Field strength contours.

    Code of Federal Regulations, 2010 CFR

    2010-10-01

    ... 47 Telecommunication 4 2010-10-01 2010-10-01 false Field strength contours. 73.311 Section 73.311... Broadcast Stations § 73.311 Field strength contours. (a) Applications for FM broadcast authorizations must show the field strength contours required by FCC Form 301 or FCC Form 340, as appropriate. (b)...

  10. 47 CFR 73.311 - Field strength contours.

    Code of Federal Regulations, 2013 CFR

    2013-10-01

    ... 47 Telecommunication 4 2013-10-01 2013-10-01 false Field strength contours. 73.311 Section 73.311... Broadcast Stations § 73.311 Field strength contours. (a) Applications for FM broadcast authorizations must show the field strength contours required by FCC Form 301 or FCC Form 340, as appropriate. (b)...

  11. 47 CFR 73.311 - Field strength contours.

    Code of Federal Regulations, 2011 CFR

    2011-10-01

    ... 47 Telecommunication 4 2011-10-01 2011-10-01 false Field strength contours. 73.311 Section 73.311... Broadcast Stations § 73.311 Field strength contours. (a) Applications for FM broadcast authorizations must show the field strength contours required by FCC Form 301 or FCC Form 340, as appropriate. (b)...

  12. 47 CFR 73.311 - Field strength contours.

    Code of Federal Regulations, 2014 CFR

    2014-10-01

    ... 47 Telecommunication 4 2014-10-01 2014-10-01 false Field strength contours. 73.311 Section 73.311... Broadcast Stations § 73.311 Field strength contours. (a) Applications for FM broadcast authorizations must show the field strength contours required by FCC Form 301 or FCC Form 340, as appropriate. (b)...

  13. 47 CFR 73.311 - Field strength contours.

    Code of Federal Regulations, 2012 CFR

    2012-10-01

    ... 47 Telecommunication 4 2012-10-01 2012-10-01 false Field strength contours. 73.311 Section 73.311... Broadcast Stations § 73.311 Field strength contours. (a) Applications for FM broadcast authorizations must show the field strength contours required by FCC Form 301 or FCC Form 340, as appropriate. (b)...

  14. Image Segmentation With Cage Active Contours.

    PubMed

    Garrido, Lluís; Guerrieri, Marité; Igual, Laura

    2015-12-01

    In this paper, we present a framework for image segmentation based on parametrized active contours. The evolving contour is parametrized according to a reduced set of control points that form a closed polygon and have a clear visual interpretation. The parametrization, called mean value coordinates, stems from the techniques used in computer graphics to animate virtual models. Our framework allows to easily formulate region-based energies to segment an image. In particular, we present three different local region-based energy terms: 1) the mean model; 2) the Gaussian model; 3) and the histogram model. We show the behavior of our method on synthetic and real images and compare the performance with state-of-the-art level set methods. PMID:26316128

  15. Thermal contouring of forestry data: Wallops Island

    NASA Technical Reports Server (NTRS)

    Thomson, F.

    1972-01-01

    The contouring of 8-13.5 micrometer thermal data collected over a forestry site in Virginia is described. The data were collected at an altitude of 1000 ft above terrain on November 4, 1970. The site was covered on three approximately parallel lines. The purpose of the contouring was to attempt to delineate pine trees attacked by southern pine bark beetle, and to map other important terrain categories. Special processing steps were required to achieve the correct aspect ratio of the thermal data. The reference for the correction procedure was color infrared photography. Data form and quality are given, processing steps are outlined, a brief interpretation of results is given, and conclusion are presented.

  16. EFFICIENT FEATURE-BASED CONTOUR EXTRACTION.

    SciTech Connect

    Gattiker, J. R.

    2001-01-01

    Extraction of contours in binary images is an important element of object recognition. This paper discusses a more efficient approach to contour representation and generation. This approach defines a bounding polygon as defined by its vertices rather than by all enclosing pixels, which in itself is an effective representation. These corners can be identified by convolution of the image with a 3 x 3 filter. When these corners are organized by their connecting orientation, identified by the convolution, and type, inside or outside, connectivity characteristics can be articulated to highly constrain the task of sorting the vertices into ordered boundary lists. The search for the next bounding polygon vertex is reduced to a one dimensional minimum distance search rather than the standard, more intensive two dimensional nearest Euclidean neighbor search.

  17. Contour forming of metals by laser peening

    DOEpatents

    Hackel, Lloyd; Harris, Fritz

    2002-01-01

    A method and apparatus are provided for forming shapes and contours in metal sections by generating laser induced compressive stress on the surface of the metal workpiece. The laser process can generate deep compressive stresses to shape even thick components without inducing unwanted tensile stress at the metal surface. The precision of the laser-induced stress enables exact prediction and subsequent contouring of parts. A light beam of 10 to 100 J/pulse is imaged to create an energy fluence of 60 to 200 J/cm.sup.2 on an absorptive layer applied over a metal surface. A tamping layer of water is flowed over the absorptive layer. The absorption of laser light causes a plasma to form and consequently creates a shock wave that induces a deep residual compressive stress into the metal. The metal responds to this residual stress by bending.

  18. Numerosity underestimation in sets with illusory contours.

    PubMed

    Kirjakovski, Atanas; Matsumoto, Eriko

    2016-05-01

    People underestimate the numerosity of collections in which a few dots are connected in pairs by task-irrelevant lines. Such configural processing suggests that visual numerosity depends on the perceived scene segments, rather than on the perceived total area occupied by a collection. However, a methodology that uses irrelevant line connections may also introduce unnecessary distraction and variety, or obscure the perception of task-relevant items, given the saliency of the lines. To avoid such potentially confounding variables, we conducted four experiments where the line-connected dots were replaced with collinear inducers of Kanizsa-type illusory contours. Our participants had to compare two simultaneously presented collections and choose the more numerous one. Displays comprised c-shaped inducers and disks (Experiment 1), c-shaped inducers only (Experiments 2 and 4), or closed inducers (Experiment 3). One display always showed a 12- (Experiments 1-3) or 48-item reference pattern (Experiment 4); the other was a test pattern with numerosity varying between 9 and 15 (Experiments 1-3) or 36-60 items (Experiment 4). By manipulating the number of illusory contours in the test patterns, the level of connectedness increased or decreased respectively. The fitted psychometric functions revealed an underestimation that increased with the number of illusory contours in Experiments 1 and 2, but was absent in Experiments 3 and 4, where illusory contours were more difficult to perceive or larger numerosities were used. Results corroborate claims that visual numerosity estimation depends on segmented inputs, but only within moderate numerical ranges. PMID:27038561

  19. Experimental Garden Plots for Botany Lessons

    ERIC Educational Resources Information Center

    Gorodnicheva, V. V.; Vasil'eva, E. I.

    1976-01-01

    Discussion of the botany lessons used at two schools points out the need for fifth and sixth grade students to be taught the principles of plant life through observations made at an experimental garden plot at the school. (ND)

  20. Preparation of magnetic anomaly profile and contour maps from DOE-NURE aerial survey data. Volume I: processing procedures. [National Uranium Resource Evaluation

    SciTech Connect

    Tinnel, E.P.; Hinze, W.J.

    1981-09-01

    Total intensity magnetic anomaly data acquired as a supplement to radiometric data in the DOE National Uranium Resource Evaluation (NURE) Program are useful in preparing regional profile and contour maps. Survey-contractor-supplied magnetic anomaly data are subjected to a multiprocess, computer-based procedure which prepares these data for presentation. This procedure is used to produce the following machine plotted maps of National Topographic Map Series quadrangle units at a 1:250,000 scale: (1) profile map of contractor-supplied magnetic anomaly data, (2) profile map of high-cut filtered data with contour levels of each profile marked and annotated on the associated flight track, (3) profile map of critical-point data with contour levels indicated, and (4) contour map of filtered and selected data. These quadrangle maps are supplemented with a range of statistical measures of the data which are useful in quality evaluation.

  1. Semi-automated contour recognition using DICOMautomaton

    NASA Astrophysics Data System (ADS)

    Clark, H.; Wu, J.; Moiseenko, V.; Lee, R.; Gill, B.; Duzenli, C.; Thomas, S.

    2014-03-01

    Purpose: A system has been developed which recognizes and classifies Digital Imaging and Communication in Medicine contour data with minimal human intervention. It allows researchers to overcome obstacles which tax analysis and mining systems, including inconsistent naming conventions and differences in data age or resolution. Methods: Lexicographic and geometric analysis is used for recognition. Well-known lexicographic methods implemented include Levenshtein-Damerau, bag-of-characters, Double Metaphone, Soundex, and (word and character)-N-grams. Geometrical implementations include 3D Fourier Descriptors, probability spheres, boolean overlap, simple feature comparison (e.g. eccentricity, volume) and rule-based techniques. Both analyses implement custom, domain-specific modules (e.g. emphasis differentiating left/right organ variants). Contour labels from 60 head and neck patients are used for cross-validation. Results: Mixed-lexicographical methods show an effective improvement in more than 10% of recognition attempts compared with a pure Levenshtein-Damerau approach when withholding 70% of the lexicon. Domain-specific and geometrical techniques further boost performance. Conclusions: DICOMautomaton allows users to recognize contours semi-automatically. As usage increases and the lexicon is filled with additional structures, performance improves, increasing the overall utility of the system.

  2. Inlet contour and flow effects on radiation

    NASA Technical Reports Server (NTRS)

    Ville, J. M.; Silcox, R. J.

    1980-01-01

    An experimental investigation of sound radiation from inlets with different contours with and without flow is being conducted to study the possibility of reducing noise radiated by aircraft engines. For each inlet configuration, complex directivity patterns and complex pressure reflection coefficients are measured as a function of a single space-time structure of the wave (up to a frequency of 4000Hz and an azimuthal wave number 6) and of flow velocity (up to Mach number 0.4) in a cylindrical duct located downstream the inlet. Experimental results of radiation from an unflanged duct are compared with theory. Effect of inlet contour and flow are deduced by comparing respectively unflanged duct and bellmouth measurements and, no flow and flow measurements with the bellmouth. Results are presented which indicate that the contour effect is significant near the cut-on frequency of a mode and emphasize the necessity for taking into account the inlet geometry in a radiation prediction. These results show also that internal flow has a weak effect on the amplitude of the directivity pattern

  3. Inlet contour and flow effects on radiation

    NASA Astrophysics Data System (ADS)

    Ville, J. M.; Silcox, R. J.

    1980-06-01

    An experimental investigation of sound radiation from inlets with different contours with and without flow is being conducted to study the possibility of reducing noise radiated by aircraft engines. For each inlet configuration, complex directivity patterns and complex pressure reflection coefficients are measured as a function of a single space-time structure of the wave (up to a frequency of 4000Hz and an azimuthal wave number 6) and of flow velocity (up to Mach number 0.4) in a cylindrical duct located downstream the inlet. Experimental results of radiation from an unflanged duct are compared with theory. Effect of inlet contour and flow are deduced by comparing respectively unflanged duct and bellmouth measurements and, no flow and flow measurements with the bellmouth. Results are presented which indicate that the contour effect is significant near the cut-on frequency of a mode and emphasize the necessity for taking into account the inlet geometry in a radiation prediction. These results show also that internal flow has a weak effect on the amplitude of the directivity pattern

  4. Breast Contour Detection with Stable Paths

    NASA Astrophysics Data System (ADS)

    Cardoso, Jaime S.; Sousa, Ricardo; Teixeira, Luís F.; Cardoso, M. J.

    Breast cancer conservative treatment (BCCT), due to its proven oncological safety, is considered, when feasible, the gold standard of breast cancer treatment. However, aesthetic results are heterogeneous and difficult to evaluate in a standardized way, due to the lack of reproducibility of the subjective methods usually applied. The objective assessment methods, considered in the past as being less capable of evaluating all aspects of BCCT, are nowadays being preferred to overcome the drawbacks of the subjective evaluation. A computer-aided medical system was recently developed to objectively and automatically evaluate the aesthetic result of BCCT. In this system, the detection of the breast contour on the patient's digital photograph is a necessary step to extract the features subsequently used in the evaluation process. In this paper an algorithm based on the shortest path on a graph is proposed to detect automatically the breast contour. The proposed method extends an existing semi-automatic algorithm for the same purpose. A comprehensive comparison with manually-drawn contours reveals the strength of the proposed method.

  5. Contour-Driven Atlas-Based Segmentation.

    PubMed

    Wachinger, Christian; Fritscher, Karl; Sharp, Greg; Golland, Polina

    2015-12-01

    We propose new methods for automatic segmentation of images based on an atlas of manually labeled scans and contours in the image. First, we introduce a Bayesian framework for creating initial label maps from manually annotated training images. Within this framework, we model various registration- and patch-based segmentation techniques by changing the deformation field prior. Second, we perform contour-driven regression on the created label maps to refine the segmentation. Image contours and image parcellations give rise to non-stationary kernel functions that model the relationship between image locations. Setting the kernel to the covariance function in a Gaussian process establishes a distribution over label maps supported by image structures. Maximum a posteriori estimation of the distribution over label maps conditioned on the outcome of the atlas-based segmentation yields the refined segmentation. We evaluate the segmentation in two clinical applications: the segmentation of parotid glands in head and neck CT scans and the segmentation of the left atrium in cardiac MR angiography images. PMID:26068202

  6. Application of 2D Non-Graphene Materials and 2D Oxide Nanostructures for Biosensing Technology

    PubMed Central

    Shavanova, Kateryna; Bakakina, Yulia; Burkova, Inna; Shtepliuk, Ivan; Viter, Roman; Ubelis, Arnolds; Beni, Valerio; Starodub, Nickolaj; Yakimova, Rositsa; Khranovskyy, Volodymyr

    2016-01-01

    The discovery of graphene and its unique properties has inspired researchers to try to invent other two-dimensional (2D) materials. After considerable research effort, a distinct “beyond graphene” domain has been established, comprising the library of non-graphene 2D materials. It is significant that some 2D non-graphene materials possess solid advantages over their predecessor, such as having a direct band gap, and therefore are highly promising for a number of applications. These applications are not limited to nano- and opto-electronics, but have a strong potential in biosensing technologies, as one example. However, since most of the 2D non-graphene materials have been newly discovered, most of the research efforts are concentrated on material synthesis and the investigation of the properties of the material. Applications of 2D non-graphene materials are still at the embryonic stage, and the integration of 2D non-graphene materials into devices is scarcely reported. However, in recent years, numerous reports have blossomed about 2D material-based biosensors, evidencing the growing potential of 2D non-graphene materials for biosensing applications. This review highlights the recent progress in research on the potential of using 2D non-graphene materials and similar oxide nanostructures for different types of biosensors (optical and electrochemical). A wide range of biological targets, such as glucose, dopamine, cortisol, DNA, IgG, bisphenol, ascorbic acid, cytochrome and estradiol, has been reported to be successfully detected by biosensors with transducers made of 2D non-graphene materials. PMID:26861346

  7. Application of 2D Non-Graphene Materials and 2D Oxide Nanostructures for Biosensing Technology.

    PubMed

    Shavanova, Kateryna; Bakakina, Yulia; Burkova, Inna; Shtepliuk, Ivan; Viter, Roman; Ubelis, Arnolds; Beni, Valerio; Starodub, Nickolaj; Yakimova, Rositsa; Khranovskyy, Volodymyr

    2016-01-01

    The discovery of graphene and its unique properties has inspired researchers to try to invent other two-dimensional (2D) materials. After considerable research effort, a distinct "beyond graphene" domain has been established, comprising the library of non-graphene 2D materials. It is significant that some 2D non-graphene materials possess solid advantages over their predecessor, such as having a direct band gap, and therefore are highly promising for a number of applications. These applications are not limited to nano- and opto-electronics, but have a strong potential in biosensing technologies, as one example. However, since most of the 2D non-graphene materials have been newly discovered, most of the research efforts are concentrated on material synthesis and the investigation of the properties of the material. Applications of 2D non-graphene materials are still at the embryonic stage, and the integration of 2D non-graphene materials into devices is scarcely reported. However, in recent years, numerous reports have blossomed about 2D material-based biosensors, evidencing the growing potential of 2D non-graphene materials for biosensing applications. This review highlights the recent progress in research on the potential of using 2D non-graphene materials and similar oxide nanostructures for different types of biosensors (optical and electrochemical). A wide range of biological targets, such as glucose, dopamine, cortisol, DNA, IgG, bisphenol, ascorbic acid, cytochrome and estradiol, has been reported to be successfully detected by biosensors with transducers made of 2D non-graphene materials. PMID:26861346

  8. Automated contouring error detection based on supervised geometric attribute distribution models for radiation therapy: A general strategy

    SciTech Connect

    Chen, Hsin-Chen; Tan, Jun; Dolly, Steven; Kavanaugh, James; Harold Li, H.; Altman, Michael; Gay, Hiram; Thorstad, Wade L.; Mutic, Sasa; Li, Hua; Anastasio, Mark A.; Low, Daniel A.

    2015-02-15

    were separately employed to test the effectiveness of the proposed contouring error detection strategy. Results: An evaluation tool was implemented to illustrate how the proposed strategy automatically detects the radiation therapy contouring errors for a given patient and provides 3D graphical visualization of error detection results as well. The contouring error detection results were achieved with an average sensitivity of 0.954/0.906 and an average specificity of 0.901/0.909 on the centroid/volume related contouring errors of all the tested samples. As for the detection results on structural shape related contouring errors, an average sensitivity of 0.816 and an average specificity of 0.94 on all the tested samples were obtained. The promising results indicated the feasibility of the proposed strategy for the detection of contouring errors with low false detection rate. Conclusions: The proposed strategy can reliably identify contouring errors based upon inter- and intrastructural constraints derived from clinically approved contours. It holds great potential for improving the radiation therapy workflow. ROC and box plot analyses allow for analytically tuning of the system parameters to satisfy clinical requirements. Future work will focus on the improvement of strategy reliability by utilizing more training sets and additional geometric attribute constraints.

  9. 3D Actin Network Centerline Extraction with Multiple Active Contours

    PubMed Central

    Xu, Ting; Vavylonis, Dimitrios; Huang, Xiaolei

    2013-01-01

    Fluorescence microscopy is frequently used to study two and three dimensional network structures formed by cytoskeletal polymer fibers such as actin filaments and actin cables. While these cytoskeletal structures are often dilute enough to allow imaging of individual filaments or bundles of them, quantitative analysis of these images is challenging. To facilitate quantitative, reproducible and objective analysis of the image data, we propose a semi-automated method to extract actin networks and retrieve their topology in 3D. Our method uses multiple Stretching Open Active Contours (SOACs) that are automatically initialized at image intensity ridges and then evolve along the centerlines of filaments in the network. SOACs can merge, stop at junctions, and reconfigure with others to allow smooth crossing at junctions of filaments. The proposed approach is generally applicable to images of curvilinear networks with low SNR. We demonstrate its potential by extracting the centerlines of synthetic meshwork images, actin networks in 2D Total Internal Reflection Fluorescence Microscopy images, and 3D actin cable meshworks of live fission yeast cells imaged by spinning disk confocal microscopy. Quantitative evaluation of the method using synthetic images shows that for images with SNR above 5.0, the average vertex error measured by the distance between our result and ground truth is 1 voxel, and the average Hausdorff distance is below 10 voxels. PMID:24316442

  10. 3D Filament Network Segmentation with Multiple Active Contours

    NASA Astrophysics Data System (ADS)

    Xu, Ting; Vavylonis, Dimitrios; Huang, Xiaolei

    2014-03-01

    Fluorescence microscopy is frequently used to study two and three dimensional network structures formed by cytoskeletal polymer fibers such as actin filaments and microtubules. While these cytoskeletal structures are often dilute enough to allow imaging of individual filaments or bundles of them, quantitative analysis of these images is challenging. To facilitate quantitative, reproducible and objective analysis of the image data, we developed a semi-automated method to extract actin networks and retrieve their topology in 3D. Our method uses multiple Stretching Open Active Contours (SOACs) that are automatically initialized at image intensity ridges and then evolve along the centerlines of filaments in the network. SOACs can merge, stop at junctions, and reconfigure with others to allow smooth crossing at junctions of filaments. The proposed approach is generally applicable to images of curvilinear networks with low SNR. We demonstrate its potential by extracting the centerlines of synthetic meshwork images, actin networks in 2D TIRF Microscopy images, and 3D actin cable meshworks of live fission yeast cells imaged by spinning disk confocal microscopy.

  11. Numerical characterization of DNA sequences in a 2-D graphical representation scheme of low degeneracy

    NASA Astrophysics Data System (ADS)

    Guo, Xiaofeng; Nandy, Ashesh

    2003-02-01

    Some 2-D and 3-D graphical representations of DNA sequences have been given by Gate, Nandy, Leong, Randic, and Guo et al. Based on 2-D graphical representation of DNA sequences, Raychaudhury and Nandy introduced the first-order moments of the x and y coordinates and the radius of the plot of a DNA sequence for indexing scheme and similarity measures of DNA sequences. In this Letter, based on Guo's novel 2-D graphical representation of DNA sequences of low degeneracy, we introduce the improved first-order moments of the x and y coordinates and the radius of DNA sequences, and the distance of two DNA sequences. The new descriptors of DNA sequences give a good numerical characterization of DNA sequences, which have lower degeneracy.

  12. Computer programs for plotting curves with various dashed-line sequences

    NASA Technical Reports Server (NTRS)

    Desmarais, R. N.; Bennett, R. M.

    1972-01-01

    Two FORTRAN-callable subprograms have been written to draw a smooth curve through a set of input points as a solid line or as a general sequence of long and short dashes. Subroutine LINSEQ draws conventional curves whereas subroutine CONSEQ draws smooth closed curves (contours). The subprograms are based on an approximate calculation of the arc length along the curve and spline interpolation along the arc length. Options are provided for smoothing of the input data and for offsetting the plotted curve from the input data points. The method of calculation of the arc length and the generation of the line sequence are described.Usage descriptions of the main subprograms, sample calling programs illustrating the various features of the subprograms, and sample plots are given. The subroutines should be readily adaptable to almost any computer-driven incremental plotter.

  13. Static & Dynamic Response of 2D Solids

    1996-07-15

    NIKE2D is an implicit finite-element code for analyzing the finite deformation, static and dynamic response of two-dimensional, axisymmetric, plane strain, and plane stress solids. The code is fully vectorized and available on several computing platforms. A number of material models are incorporated to simulate a wide range of material behavior including elasto-placicity, anisotropy, creep, thermal effects, and rate dependence. Slideline algorithms model gaps and sliding along material interfaces, including interface friction, penetration and single surfacemore » contact. Interactive-graphics and rezoning is included for analyses with large mesh distortions. In addition to quasi-Newton and arc-length procedures, adaptive algorithms can be defined to solve the implicit equations using the solution language ISLAND. Each of these capabilities and more make NIKE2D a robust analysis tool.« less

  14. Stochastic Inversion of 2D Magnetotelluric Data

    2010-07-01

    The algorithm is developed to invert 2D magnetotelluric (MT) data based on sharp boundary parametrization using a Bayesian framework. Within the algorithm, we consider the locations and the resistivity of regions formed by the interfaces are as unknowns. We use a parallel, adaptive finite-element algorithm to forward simulate frequency-domain MT responses of 2D conductivity structure. Those unknown parameters are spatially correlated and are described by a geostatistical model. The joint posterior probability distribution function ismore » explored by Markov Chain Monte Carlo (MCMC) sampling methods. The developed stochastic model is effective for estimating the interface locations and resistivity. Most importantly, it provides details uncertainty information on each unknown parameter. Hardware requirements: PC, Supercomputer, Multi-platform, Workstation; Software requirements C and Fortan; Operation Systems/version is Linux/Unix or Windows« less

  15. Stochastic Inversion of 2D Magnetotelluric Data

    SciTech Connect

    Chen, Jinsong

    2010-07-01

    The algorithm is developed to invert 2D magnetotelluric (MT) data based on sharp boundary parametrization using a Bayesian framework. Within the algorithm, we consider the locations and the resistivity of regions formed by the interfaces are as unknowns. We use a parallel, adaptive finite-element algorithm to forward simulate frequency-domain MT responses of 2D conductivity structure. Those unknown parameters are spatially correlated and are described by a geostatistical model. The joint posterior probability distribution function is explored by Markov Chain Monte Carlo (MCMC) sampling methods. The developed stochastic model is effective for estimating the interface locations and resistivity. Most importantly, it provides details uncertainty information on each unknown parameter. Hardware requirements: PC, Supercomputer, Multi-platform, Workstation; Software requirements C and Fortan; Operation Systems/version is Linux/Unix or Windows

  16. Explicit 2-D Hydrodynamic FEM Program

    1996-08-07

    DYNA2D* is a vectorized, explicit, two-dimensional, axisymmetric and plane strain finite element program for analyzing the large deformation dynamic and hydrodynamic response of inelastic solids. DYNA2D* contains 13 material models and 9 equations of state (EOS) to cover a wide range of material behavior. The material models implemented in all machine versions are: elastic, orthotropic elastic, kinematic/isotropic elastic plasticity, thermoelastoplastic, soil and crushable foam, linear viscoelastic, rubber, high explosive burn, isotropic elastic-plastic, temperature-dependent elastic-plastic. Themore » isotropic and temperature-dependent elastic-plastic models determine only the deviatoric stresses. Pressure is determined by one of 9 equations of state including linear polynomial, JWL high explosive, Sack Tuesday high explosive, Gruneisen, ratio of polynomials, linear polynomial with energy deposition, ignition and growth of reaction in HE, tabulated compaction, and tabulated.« less

  17. Schottky diodes from 2D germanane

    NASA Astrophysics Data System (ADS)

    Sahoo, Nanda Gopal; Esteves, Richard J.; Punetha, Vinay Deep; Pestov, Dmitry; Arachchige, Indika U.; McLeskey, James T.

    2016-07-01

    We report on the fabrication and characterization of a Schottky diode made using 2D germanane (hydrogenated germanene). When compared to germanium, the 2D structure has higher electron mobility, an optimal band-gap, and exceptional stability making germanane an outstanding candidate for a variety of opto-electronic devices. One-atom-thick sheets of hydrogenated puckered germanium atoms have been synthesized from a CaGe2 framework via intercalation and characterized by XRD, Raman, and FTIR techniques. The material was then used to fabricate Schottky diodes by suspending the germanane in benzonitrile and drop-casting it onto interdigitated metal electrodes. The devices demonstrate significant rectifying behavior and the outstanding potential of this material.

  18. Layer Engineering of 2D Semiconductor Junctions.

    PubMed

    He, Yongmin; Sobhani, Ali; Lei, Sidong; Zhang, Zhuhua; Gong, Yongji; Jin, Zehua; Zhou, Wu; Yang, Yingchao; Zhang, Yuan; Wang, Xifan; Yakobson, Boris; Vajtai, Robert; Halas, Naomi J; Li, Bo; Xie, Erqing; Ajayan, Pulickel

    2016-07-01

    A new concept for junction fabrication by connecting multiple regions with varying layer thicknesses, based on the thickness dependence, is demonstrated. This type of junction is only possible in super-thin-layered 2D materials, and exhibits similar characteristics as p-n junctions. Rectification and photovoltaic effects are observed in chemically homogeneous MoSe2 junctions between domains of different thicknesses. PMID:27136275

  19. 2dF mechanical engineering

    NASA Astrophysics Data System (ADS)

    Smith, Greg; Lankshear, Allan

    1998-07-01

    2dF is a multi-object instrument mounted at prime focus at the AAT capable of spectroscopic analysis of 400 objects in a single 2 degree field. It also prepares a second 2 degree 400 object field while the first field is being observed. At its heart is a high precision robotic positioner that places individual fiber end magnetic buttons on one of two field plates. The button gripper is carried on orthogonal gantries powered by linear synchronous motors and contains a TV camera which precisely locates backlit buttons to allow placement in user defined locations to 10 (mu) accuracy. Fiducial points on both plates can also be observed by the camera to allow repeated checks on positioning accuracy. Field plates rotate to follow apparent sky rotation. The spectrographs both analyze light from the 200 observing fibers each and back- illuminate the 400 fibers being re-positioned during the observing run. The 2dF fiber position and spectrograph system is a large and complex instrument located at the prime focus of the Anglo Australian Telescope. The mechanical design has departed somewhat from the earlier concepts of Gray et al, but still reflects the audacity of those first ideas. The positioner is capable of positioning 400 fibers on a field plate while another 400 fibers on another plate are observing at the focus of the telescope and feeding the twin spectrographs. When first proposed it must have seemed like ingenuity unfettered by caution. Yet now it works, and works wonderfully well. 2dF is a system which functions as the result of the combined and coordinated efforts of the astronomers, the mechanical designers and tradespeople, the electronic designers, the programmers, the support staff at the telescope, and the manufacturing subcontractors. The mechanical design of the 2dF positioner and spectrographs was carried out by the mechanical engineering staff of the AAO and the majority of the manufacture was carried out in the AAO workshops.

  20. Realistic and efficient 2D crack simulation

    NASA Astrophysics Data System (ADS)

    Yadegar, Jacob; Liu, Xiaoqing; Singh, Abhishek

    2010-04-01

    Although numerical algorithms for 2D crack simulation have been studied in Modeling and Simulation (M&S) and computer graphics for decades, realism and computational efficiency are still major challenges. In this paper, we introduce a high-fidelity, scalable, adaptive and efficient/runtime 2D crack/fracture simulation system by applying the mathematically elegant Peano-Cesaro triangular meshing/remeshing technique to model the generation of shards/fragments. The recursive fractal sweep associated with the Peano-Cesaro triangulation provides efficient local multi-resolution refinement to any level-of-detail. The generated binary decomposition tree also provides efficient neighbor retrieval mechanism used for mesh element splitting and merging with minimal memory requirements essential for realistic 2D fragment formation. Upon load impact/contact/penetration, a number of factors including impact angle, impact energy, and material properties are all taken into account to produce the criteria of crack initialization, propagation, and termination leading to realistic fractal-like rubble/fragments formation. The aforementioned parameters are used as variables of probabilistic models of cracks/shards formation, making the proposed solution highly adaptive by allowing machine learning mechanisms learn the optimal values for the variables/parameters based on prior benchmark data generated by off-line physics based simulation solutions that produce accurate fractures/shards though at highly non-real time paste. Crack/fracture simulation has been conducted on various load impacts with different initial locations at various impulse scales. The simulation results demonstrate that the proposed system has the capability to realistically and efficiently simulate 2D crack phenomena (such as window shattering and shards generation) with diverse potentials in military and civil M&S applications such as training and mission planning.

  1. Compact 2-D graphical representation of DNA

    NASA Astrophysics Data System (ADS)

    Randić, Milan; Vračko, Marjan; Zupan, Jure; Novič, Marjana

    2003-05-01

    We present a novel 2-D graphical representation for DNA sequences which has an important advantage over the existing graphical representations of DNA in being very compact. It is based on: (1) use of binary labels for the four nucleic acid bases, and (2) use of the 'worm' curve as template on which binary codes are placed. The approach is illustrated on DNA sequences of the first exon of human β-globin and gorilla β-globin.

  2. 2D materials: Graphene and others

    NASA Astrophysics Data System (ADS)

    Bansal, Suneev Anil; Singh, Amrinder Pal; Kumar, Suresh

    2016-05-01

    Present report reviews the recent advancements in new atomically thick 2D materials. Materials covered in this review are Graphene, Silicene, Germanene, Boron Nitride (BN) and Transition metal chalcogenides (TMC). These materials show extraordinary mechanical, electronic and optical properties which make them suitable candidates for future applications. Apart from unique properties, tune-ability of highly desirable properties of these materials is also an important area to be emphasized on.

  3. TACO (2D AND 3D). Taco

    SciTech Connect

    Mason, W.E.

    1983-03-01

    A set of finite element codes for the solution of nonlinear, two-dimensional (TACO2D) and three-dimensional (TACO3D) heat transfer problems. Performs linear and nonlinear analyses of both transient and steady state heat transfer problems. Has the capability to handle time or temperature dependent material properties. Materials may be either isotropic or orthotropic. A variety of time and temperature dependent boundary conditions and loadings are available including temperature, flux, convection, radiation, and internal heat generation.

  4. The role of head movements in the discrimination of 2-D shape by blind echolocation experts.

    PubMed

    Milne, Jennifer L; Goodale, Melvyn A; Thaler, Lore

    2014-08-01

    Similar to certain bats and dolphins, some blind humans can use sound echoes to perceive their silent surroundings. By producing an auditory signal (e.g., a tongue click) and listening to the returning echoes, these individuals can obtain information about their environment, such as the size, distance, and density of objects. Past research has also hinted at the possibility that blind individuals may be able to use echolocation to gather information about 2-D surface shape, with definite results pending. Thus, here we investigated people's ability to use echolocation to identify the 2-D shape (contour) of objects. We also investigated the role played by head movements--that is, exploratory movements of the head while echolocating--because anecdotal evidence suggests that head movements might be beneficial for shape identification. To this end, we compared the performance of six expert echolocators to that of ten blind nonecholocators and ten blindfolded sighted controls in a shape identification task, with and without head movements. We found that the expert echolocators could use echoes to determine the shapes of the objects with exceptional accuracy when they were allowed to make head movements, but that their performance dropped to chance level when they had to remain still. Neither blind nor blindfolded sighted controls performed above chance, regardless of head movements. Our results show not only that experts can use echolocation to successfully identify 2-D shape, but also that head movements made while echolocating are necessary for the correct identification of 2-D shape. PMID:24874262

  5. Motion-based mechanisms of illusory contour synthesis.

    PubMed

    Anderson, B L; Barth, H C

    1999-10-01

    Neurophysiological studies and computational models of illusory contour formation have focused on contour orientation as the underlying determinant of illusory contour shape in both static and moving displays. Here, we report a class of motion-induced illusory contours that demonstrate the existence of novel mechanisms of illusory contour synthesis. In a series of experiments, we show that the velocity of contour terminations and the direction of motion of a partially occluded figure regulate the perceived shape and apparent movement of illusory contours formed from moving image sequences. These results demonstrate the existence of neural mechanisms that reconstruct occlusion relationships from both real and inferred image velocities, in contrast to the static geometric mechanisms that have been the focus of studies to date. PMID:10571236

  6. Enhanced perception of terrain hazards in off-road path choice: stereoscopic 3D versus 2D displays

    NASA Astrophysics Data System (ADS)

    Merritt, John O.; CuQlock-Knopp, V. Grayson; Myles, Kimberly

    1997-06-01

    Off-road mobility at night is a critical factor in modern military operations. Soldiers traversing off-road terrain, both on foot and in combat vehicles, often use 2D viewing devices (such as a driver's thermal viewer, or biocular or monocular night-vision goggles) for tactical mobility under low-light conditions. Perceptual errors can occur when 2D displays fail to convey adequately the contours of terrain. Some off-road driving accidents have been attributed to inadequate perception of terrain features due to using 2D displays (which do not provide binocular-parallax cues to depth perception). In this study, photographic images of terrain scenes were presented first in conventional 2D video, and then in stereoscopic 3D video. The percentage of possible correct answers for 2D and 3D were: 2D pretest equals 52%, 3D pretest equals 80%, 2D posttest equals 48%, 3D posttest equals 78%. Other recent studies conducted at the US Army Research Laboratory's Human Research and Engineering Directorate also show that stereoscopic 3D displays can significantly improve visual evaluation of terrain features, and thus may improve the safety and effectiveness of military off-road mobility operation, both on foot and in combat vehicles.

  7. Tomosynthesis imaging with 2D scanning trajectories

    NASA Astrophysics Data System (ADS)

    Khare, Kedar; Claus, Bernhard E. H.; Eberhard, Jeffrey W.

    2011-03-01

    Tomosynthesis imaging in chest radiography provides volumetric information with the potential for improved diagnostic value when compared to the standard AP or LAT projections. In this paper we explore the image quality benefits of 2D scanning trajectories when coupled with advanced image reconstruction approaches. It is intuitively clear that 2D trajectories provide projection data that is more complete in terms of Radon space filling, when compared with conventional tomosynthesis using a linearly scanned source. Incorporating this additional information for obtaining improved image quality is, however, not a straightforward problem. The typical tomosynthesis reconstruction algorithms are based on direct inversion methods e.g. Filtered Backprojection (FBP) or iterative algorithms that are variants of the Algebraic Reconstruction Technique (ART). The FBP approach is fast and provides high frequency details in the image but at the same time introduces streaking artifacts degrading the image quality. The iterative methods can reduce the image artifacts by using image priors but suffer from a slow convergence rate, thereby producing images lacking high frequency details. In this paper we propose using a fast converging optimal gradient iterative scheme that has advantages of both the FBP and iterative methods in that it produces images with high frequency details while reducing the image artifacts. We show that using favorable 2D scanning trajectories along with the proposed reconstruction method has the advantage of providing improved depth information for structures such as the spine and potentially producing images with more isotropic resolution.

  8. MAGNUM-2D computer code: user's guide

    SciTech Connect

    England, R.L.; Kline, N.W.; Ekblad, K.J.; Baca, R.G.

    1985-01-01

    Information relevant to the general use of the MAGNUM-2D computer code is presented. This computer code was developed for the purpose of modeling (i.e., simulating) the thermal and hydraulic conditions in the vicinity of a waste package emplaced in a deep geologic repository. The MAGNUM-2D computer computes (1) the temperature field surrounding the waste package as a function of the heat generation rate of the nuclear waste and thermal properties of the basalt and (2) the hydraulic head distribution and associated groundwater flow fields as a function of the temperature gradients and hydraulic properties of the basalt. MAGNUM-2D is a two-dimensional numerical model for transient or steady-state analysis of coupled heat transfer and groundwater flow in a fractured porous medium. The governing equations consist of a set of coupled, quasi-linear partial differential equations that are solved using a Galerkin finite-element technique. A Newton-Raphson algorithm is embedded in the Galerkin functional to formulate the problem in terms of the incremental changes in the dependent variables. Both triangular and quadrilateral finite elements are used to represent the continuum portions of the spatial domain. Line elements may be used to represent discrete conduits. 18 refs., 4 figs., 1 tab.

  9. Engineering light outcoupling in 2D materials.

    PubMed

    Lien, Der-Hsien; Kang, Jeong Seuk; Amani, Matin; Chen, Kevin; Tosun, Mahmut; Wang, Hsin-Ping; Roy, Tania; Eggleston, Michael S; Wu, Ming C; Dubey, Madan; Lee, Si-Chen; He, Jr-Hau; Javey, Ali

    2015-02-11

    When light is incident on 2D transition metal dichalcogenides (TMDCs), it engages in multiple reflections within underlying substrates, producing interferences that lead to enhancement or attenuation of the incoming and outgoing strength of light. Here, we report a simple method to engineer the light outcoupling in semiconducting TMDCs by modulating their dielectric surroundings. We show that by modulating the thicknesses of underlying substrates and capping layers, the interference caused by substrate can significantly enhance the light absorption and emission of WSe2, resulting in a ∼11 times increase in Raman signal and a ∼30 times increase in the photoluminescence (PL) intensity of WSe2. On the basis of the interference model, we also propose a strategy to control the photonic and optoelectronic properties of thin-layer WSe2. This work demonstrates the utilization of outcoupling engineering in 2D materials and offers a new route toward the realization of novel optoelectronic devices, such as 2D LEDs and solar cells. PMID:25602462

  10. 2D superconductivity by ionic gating

    NASA Astrophysics Data System (ADS)

    Iwasa, Yoshi

    2D superconductivity is attracting a renewed interest due to the discoveries of new highly crystalline 2D superconductors in the past decade. Superconductivity at the oxide interfaces triggered by LaAlO3/SrTiO3 has become one of the promising routes for creation of new 2D superconductors. Also, the MBE grown metallic monolayers including FeSe are also offering a new platform of 2D superconductors. In the last two years, there appear a variety of monolayer/bilayer superconductors fabricated by CVD or mechanical exfoliation. Among these, electric field induced superconductivity by electric double layer transistor (EDLT) is a unique platform of 2D superconductivity, because of its ability of high density charge accumulation, and also because of the versatility in terms of materials, stemming from oxides to organics and layered chalcogenides. In this presentation, the following issues of electric filed induced superconductivity will be addressed; (1) Tunable carrier density, (2) Weak pinning, (3) Absence of inversion symmetry. (1) Since the sheet carrier density is quasi-continuously tunable from 0 to the order of 1014 cm-2, one is able to establish an electronic phase diagram of superconductivity, which will be compared with that of bulk superconductors. (2) The thickness of superconductivity can be estimated as 2 - 10 nm, dependent on materials, and is much smaller than the in-plane coherence length. Such a thin but low resistance at normal state results in extremely weak pinning beyond the dirty Boson model in the amorphous metallic films. (3) Due to the electric filed, the inversion symmetry is inherently broken in EDLT. This feature appears in the enhancement of Pauli limit of the upper critical field for the in-plane magnetic fields. In transition metal dichalcogenide with a substantial spin-orbit interactions, we were able to confirm the stabilization of Cooper pair due to its spin-valley locking. This work has been supported by Grant-in-Aid for Specially

  11. The use of plots in orthopaedic literature.

    PubMed

    Cool, P; Ockendon, M

    2015-12-01

    Plots are an elegant and effective way to represent data. At their best they encourage the reader and promote comprehension. A graphical representation can give a far more intuitive feel to the pattern of results in the study than a list of numerical data, or the result of a statistical calculation. The temptation to exaggerate differences or relationships between variables by using broken axes, overlaid axes, or inconsistent scaling between plots should be avoided. A plot should be self-explanatory and not complicated. It should make good use of the available space. The axes should be scaled appropriately and labelled with an appropriate dimension. Plots are recognised statistical methods of presenting data and usually require specialised statistical software to create them. The statistical analysis and methods to generate the plots are as important as the methodology of the study itself. The software, including dates and version numbers, as well as statistical tests should be appropriately referenced. Following some of the guidance provided in this article will enhance a manuscript. PMID:26637671

  12. Set-size effects in simple visual search for contour curvature.

    PubMed

    Sakai, Koji; Morishita, Masanao; Matsumoto, Hirofumi

    2007-01-01

    In a visual-search paradigm, both perception and decision processes contribute to the set-size effects. Using yes - no search tasks in set sizes from 2 to 8 for contour curvature, we examined whether the set-size effects are predicted by either the limited-capacity model or the decision-noise model. There are limitations in perception and decision-making in the limited-capacity model, but only in decision-making in the decision-noise model. The results of four experiments showed that the slopes of the logarithm of threshold plotted against the logarithm of set size ranged from 0.24 to 0.32, when the curvature was high or low, contour convexity was upward or downward, and stimulus was masked or unmasked. These slopes were closer to the prediction of 0.23 by the decision-noise model than that of 0.73 by the limited-capacity model. We interpret this that in simple visual search for contour curvature, the decision noise mainly affects the set-size effects and perceptual capacity is not limited. PMID:17455749

  13. BOREAS TE-23 Map Plot Data

    NASA Technical Reports Server (NTRS)

    Rich, Paul M.; Fournier, Robert; Hall, Forrest G. (Editor); Papagno, Andrea (Editor)

    2000-01-01

    The Boreal Ecosystem-Atmospheric Study (BOREAS) TE-23 (Terrestrial Ecology) team collected map plot data in support of its efforts to characterize and interpret information on canopy architecture and understory cover at the BOREAS tower flux sites and selected auxiliary sites from May to August 1994. Mapped plots (typical dimensions 50 m x 60 m) were set up and characterized at all BOREAS forested tower flux and selected auxiliary sites. Detailed measurement of the mapped plots included: (1) stand characteristics (location, density, basal area); (2) map locations diameter at breast height (DBH) of all trees; (3) detailed geometric measures of a subset of trees (height, crown dimensions); and (4) understory cover maps. The data are stored in tabular ASCII files. The data files are available on a CD-ROM (see document number 20010000884), or from the Oak Ridge National Laboratory (ORNL) Distributed Active Archive Center (DAAC).

  14. [Comparative quality measurements part 3: funnel plots].

    PubMed

    Kottner, Jan; Lahmann, Nils

    2014-02-01

    Comparative quality measurements between organisations or institutions are common. Quality measures need to be standardised and risk adjusted. Random error must also be taken adequately into account. Rankings without consideration of the precision lead to flawed interpretations and enhances "gaming". Application of confidence intervals is one possibility to take chance variation into account. Funnel plots are modified control charts based on Statistical Process Control (SPC) theory. The quality measures are plotted against their sample size. Warning and control limits that are 2 or 3 standard deviations from the center line are added. With increasing group size the precision increases and so the control limits are forming a funnel. Data points within the control limits are considered to show common cause variation; data points outside special cause variation without the focus of spurious rankings. Funnel plots offer data based information about how to evaluate institutional performance within quality management contexts. PMID:24571847

  15. Modeling water flow and nitrate dynamics in a plastic mulch vegetable cultivation system using HYDRUS-2D

    NASA Astrophysics Data System (ADS)

    Filipović, Vilim; Romić, Davor; Romić, Marija; Matijević, Lana; Mallmann, Fábio J. K.; Robinson, David A.

    2016-04-01

    Growing vegetables commercially requires intensive management and involves high irrigation demands and input of agrochemicals. Plastic mulch application in combination with drip irrigation is a common agricultural management technique practiced due to variety of benefits to the crop, mostly vegetable biomass production. However, the use of these techniques can result in various impacts on water and nutrient distribution in underlying soil and consequently affect nutrient leaching towards groundwater resources. The aim of this work is to estimate the effect of plastic mulch cover in combination with drip irrigation on water and nitrate dynamics in soil using HYDRUS-2D model. The field site was located in Croatian costal karst area on a Gleysol (WRB). The experiment was designed according to the split-plot design in three repetitions and was divided into plots with plastic mulch cover (MULCH) and control plots with bare soil (CONT). Each of these plots received applications of three levels of nitrogen fertilizer: 70, 140, and 210 kg per ha. All plots were equipped with drip irrigation and cropped with bell pepper (Capsicum annuum L. cv. Bianca F1). Lysimeters were installed at 90 cm depth in all plots and were used for monitoring the water and nitrate outflow. HYDRUS-2D was used for modeling the water and nitrogen outflow in the MULCH and CONT plots, implementing the proper boundary conditions. HYDRUS-2D simulated results showed good fitting to the field site observed data in both cumulative water and nitrate outflow, with high level of agreement. Water flow simulations produced model efficiency of 0.84 for CONT and 0.56 for MULCH plots, while nitrate simulations showed model efficiency ranging from 0.67 to 0.83 and from 0.70 to 0.93, respectively. Additional simulations were performed with the absence of the lysimeter, revealing faster transport of nitrates below drip line in the CONT plots, mostly because of the increased surface area subjected to precipitation

  16. High effectiveness contour matching contact heat exchanger

    NASA Astrophysics Data System (ADS)

    Blakely, Robert L.; Roebelen, George J., Jr.; Davenport, Arthur K.

    1988-08-01

    There is a need in the art for a heat exchanger design having a flexible core providing contour matching capabilities, which compensates for manufacturing tolerance and distortion buildups, and which accordingly furnishes a relatively uniform thermal contact conductance between the core and external heat sources under essentially all operating conditions. The core of the heat exchanger comprises a top plate and a bottom plate, each having alternate rows of pins attached. Each of the pins fits into corresponding tight-fitting recesses in the opposite plate.

  17. Body contouring following massive weight loss

    PubMed Central

    Langer, Vijay; Singh, Amitabh; Aly, Al S.; Cram, Albert E.

    2011-01-01

    Obesity is a global disease with epidemic proportions. Bariatric surgery or modified lifestyles go a long way in mitigating the vast weight gain. Patients following these interventions usually undergo massive weight loss. This results in redundant tissues in various parts of the body. Loose skin causes increased morbidity and psychological trauma. This demands various body contouring procedures that are usually excisional. These procedures are complex and part of a painstaking process that needs a committed patient and an industrious plastic surgeon. As complications in these patients can be quite frequent, both the patient and the surgeon need to be aware and willing to deal with them. PMID:21713202

  18. Contour dynamics model for electric discharges.

    PubMed

    Arrayás, M; Fontelos, M A; Jiménez, C

    2010-03-01

    We present an effective contour model for electrical discharges deduced as the asymptotic limit of the minimal streamer model for the propagation of electric discharges, in the limit of small electron diffusion. The incorporation of curvature effects to the velocity propagation and not to the boundary conditions is a feature and makes it different from the classical Laplacian growth models. The dispersion relation for a nonplanar two-dimensional discharge is calculated. The development and propagation of fingerlike patterns are studied and their main features quantified. PMID:20365808

  19. High effectiveness contour matching contact heat exchanger

    NASA Technical Reports Server (NTRS)

    Blakely, Robert L. (Inventor); Roebelen, George J., Jr. (Inventor); Davenport, Arthur K. (Inventor)

    1988-01-01

    There is a need in the art for a heat exchanger design having a flexible core providing contour matching capabilities, which compensates for manufacturing tolerance and distortion buildups, and which accordingly furnishes a relatively uniform thermal contact conductance between the core and external heat sources under essentially all operating conditions. The core of the heat exchanger comprises a top plate and a bottom plate, each having alternate rows of pins attached. Each of the pins fits into corresponding tight-fitting recesses in the opposite plate.

  20. Shear-strain contours from moire interferometry

    NASA Technical Reports Server (NTRS)

    Post, D.; Czarnek, R.; Joh, D.

    1985-01-01

    The development of whole-field contour maps of shear strains gamma (xy), derived from displacement fields obtained by moire interferometry with 2400 lines/mm, is described. The use of mechanical differentiation to obtain cross-derivatives of displacements and the use of graphical additive moire to sum the cross-derivatives are explained. Quantitative analysis in the small-strain domain is possible because of the high sensitivity of moire interferometry. The applicability of this technique is shown by the testing of a short epoxy beam under three-point bending.

  1. Topologically correct reconstruction of tortuous contour forests

    PubMed Central

    Edwards, John; Bajaj, Chandrajit

    2011-01-01

    Motivated by the need for correct and robust 3D models of neuronal processes, we present a method for reconstruction of spatially realistic and topologically correct models from planar cross sections of multiple objects. Previous work in 3D reconstruction from serial contours has focused on reconstructing one object at a time, potentially producing inter-object intersections between slices. We have developed a robust algorithm that removes these intersections using a geometric approach. Our method not only removes intersections but can guarantee a given minimum separation distance between objects. This paper describes the algorithm for geometric adjustment, proves correctness, and presents several results of our high-fidelity modeling. PMID:22003256

  2. GBL-2D Version 1.0: a 2D geometry boolean library.

    SciTech Connect

    McBride, Cory L. (Elemental Technologies, American Fort, UT); Schmidt, Rodney Cannon; Yarberry, Victor R.; Meyers, Ray J.

    2006-11-01

    This report describes version 1.0 of GBL-2D, a geometric Boolean library for 2D objects. The library is written in C++ and consists of a set of classes and routines. The classes primarily represent geometric data and relationships. Classes are provided for 2D points, lines, arcs, edge uses, loops, surfaces and mask sets. The routines contain algorithms for geometric Boolean operations and utility functions. Routines are provided that incorporate the Boolean operations: Union(OR), XOR, Intersection and Difference. A variety of additional analytical geometry routines and routines for importing and exporting the data in various file formats are also provided. The GBL-2D library was originally developed as a geometric modeling engine for use with a separate software tool, called SummitView [1], that manipulates the 2D mask sets created by designers of Micro-Electro-Mechanical Systems (MEMS). However, many other practical applications for this type of software can be envisioned because the need to perform 2D Boolean operations can arise in many contexts.

  3. PLOT3D Export Tool for Tecplot

    NASA Technical Reports Server (NTRS)

    Alter, Stephen

    2010-01-01

    The PLOT3D export tool for Tecplot solves the problem of modified data being impossible to output for use by another computational science solver. The PLOT3D Exporter add-on enables the use of the most commonly available visualization tools to engineers for output of a standard format. The exportation of PLOT3D data from Tecplot has far reaching effects because it allows for grid and solution manipulation within a graphical user interface (GUI) that is easily customized with macro language-based and user-developed GUIs. The add-on also enables the use of Tecplot as an interpolation tool for solution conversion between different grids of different types. This one add-on enhances the functionality of Tecplot so significantly, it offers the ability to incorporate Tecplot into a general suite of tools for computational science applications as a 3D graphics engine for visualization of all data. Within the PLOT3D Export Add-on are several functions that enhance the operations and effectiveness of the add-on. Unlike Tecplot output functions, the PLOT3D Export Add-on enables the use of the zone selection dialog in Tecplot to choose which zones are to be written by offering three distinct options - output of active, inactive, or all zones (grid blocks). As the user modifies the zones to output with the zone selection dialog, the zones to be written are similarly updated. This enables the use of Tecplot to create multiple configurations of a geometry being analyzed. For example, if an aircraft is loaded with multiple deflections of flaps, by activating and deactivating different zones for a specific flap setting, new specific configurations of that aircraft can be easily generated by only writing out specific zones. Thus, if ten flap settings are loaded into Tecplot, the PLOT3D Export software can output ten different configurations, one for each flap setting.

  4. Increasing biomass in Amazonian forest plots.

    PubMed Central

    Baker, Timothy R; Phillips, Oliver L; Malhi, Yadvinder; Almeida, Samuel; Arroyo, Luzmila; Di Fiore, Anthony; Erwin, Terry; Higuchi, Niro; Killeen, Timothy J; Laurance, Susan G; Laurance, William F; Lewis, Simon L; Monteagudo, Abel; Neill, David A; Vargas, Percy Núñez; Pitman, Nigel C A; Silva, J Natalino M; Martínez, Rodolfo Vásquez

    2004-01-01

    A previous study by Phillips et al. of changes in the biomass of permanent sample plots in Amazonian forests was used to infer the presence of a regional carbon sink. However, these results generated a vigorous debate about sampling and methodological issues. Therefore we present a new analysis of biomass change in old-growth Amazonian forest plots using updated inventory data. We find that across 59 sites, the above-ground dry biomass in trees that are more than 10 cm in diameter (AGB) has increased since plot establishment by 1.22 +/- 0.43 Mg per hectare per year (ha(-1) yr(-1), where 1 ha = 10(4) m2), or 0.98 +/- 0.38 Mg ha(-1) yr(-1) if individual plot values are weighted by the number of hectare years of monitoring. This significant increase is neither confounded by spatial or temporal variation in wood specific gravity, nor dependent on the allometric equation used to estimate AGB. The conclusion is also robust to uncertainty about diameter measurements for problematic trees: for 34 plots in western Amazon forests a significant increase in AGB is found even with a conservative assumption of zero growth for all trees where diameter measurements were made using optical methods and/or growth rates needed to be estimated following fieldwork. Overall, our results suggest a slightly greater rate of net stand-level change than was reported by Phillips et al. Considering the spatial and temporal scale of sampling and associated studies showing increases in forest growth and stem turnover, the results presented here suggest that the total biomass of these plots has on average increased and that there has been a regional-scale carbon sink in old-growth Amazonian forests during the previous two decades. PMID:15212090

  5. Image Appraisal for 2D and 3D Electromagnetic Inversion

    SciTech Connect

    Alumbaugh, D.L.; Newman, G.A.

    1999-01-28

    Linearized methods are presented for appraising image resolution and parameter accuracy in images generated with two and three dimensional non-linear electromagnetic inversion schemes. When direct matrix inversion is employed, the model resolution and posterior model covariance matrices can be directly calculated. A method to examine how the horizontal and vertical resolution varies spatially within the electromagnetic property image is developed by examining the columns of the model resolution matrix. Plotting the square root of the diagonal of the model covariance matrix yields an estimate of how errors in the inversion process such as data noise and incorrect a priori assumptions about the imaged model map into parameter error. This type of image is shown to be useful in analyzing spatial variations in the image sensitivity to the data. A method is analyzed for statistically estimating the model covariance matrix when the conjugate gradient method is employed rather than a direct inversion technique (for example in 3D inversion). A method for calculating individual columns of the model resolution matrix using the conjugate gradient method is also developed. Examples of the image analysis techniques are provided on 2D and 3D synthetic cross well EM data sets, as well as a field data set collected at the Lost Hills Oil Field in Central California.

  6. Intelligence Constraints on Terrorist Network Plots

    NASA Astrophysics Data System (ADS)

    Woo, Gordon

    Since 9/11, the western intelligence and law enforcement services have managed to interdict the great majority of planned attacks against their home countries. Network analysis shows that there are important intelligence constraints on the number and complexity of terrorist plots. If two many terrorists are involved in plots at a given time, a tipping point is reached whereby it becomes progressively easier for the dots to be joined and for the conspirators to be arrested, and for the aggregate evidence to secure convictions. Implications of this analysis are presented for the campaign to win hearts and minds.

  7. Ground penetrating radar: 2-D and 3-D subsurface imaging of a coastal barrier spit, Long Beach, WA, USA

    NASA Astrophysics Data System (ADS)

    Jol, Harry M.; Lawton, Don C.; Smith, Derald G.

    2003-07-01

    The ability to effectively interpret and reconstruct geomorphic environments has been significantly aided by the subsurface imaging capabilities of ground penetrating radar (GPR). The GPR method, which is based on the propagation and reflection of pulsed high frequency electromagnetic energy, provides high resolution (cm to m scale) and shallow subsurface (0-60 m), near continuous profiles of many coarser-grained deposits (sediments of low electrical conductivity). This paper presents 2-D and 3-D GPR results from an experiment on a regressive modern barrier spit at Willapa Bay, WA, USA. The medium-grained sand spit is 38 km long, up to 2-3.5 km wide, and is influenced by a 3.7-m tidal range (spring) as well as high energy longshore transport and high wave energy depositional processes. The spit has a freshwater aquifer recharged by rainfall. The GPR acquisition system used for the test was a portable, digital pulseEKKO™ system with antennae frequency ranging from 25 to 200 MHz and transmitter voltages ranging from 400 to 1000 V. Step sizes and antennae separation varied depending on the test requirements. In addition, 100-MHz antennae were used for conducting antennae orientation tests and collecting a detailed grid of data (50×50 m sampled every meter). The 2-D digital profiles were processed and plotted using pulseEKKO™ software. The 3-D datasets, after initial processing, were entered into a LANDMARK™ workstation that allowed for unique 3-D perspectives of the subsurface. To provide depth, near-surface velocity measurements were calculated from common midpoint (CMP) surveys. Results from the present study demonstrate higher resolution from the 200-MHz antennae for the top 5-6 m, whereas the 25- and 50-MHz antennae show deeper penetration to >10 m. For the study site, 100-MHz antennae provided acceptable resolution, continuity of reflections, and penetration. The dip profiles show a shingle-like accretionary depositional pattern, whereas strike profiles

  8. Interparticle Attraction in 2D Complex Plasmas

    NASA Astrophysics Data System (ADS)

    Kompaneets, Roman; Morfill, Gregor E.; Ivlev, Alexei V.

    2016-03-01

    Complex (dusty) plasmas allow experimental studies of various physical processes occurring in classical liquids and solids by directly observing individual microparticles. A major problem is that the interaction between microparticles is generally not molecularlike. In this Letter, we propose how to achieve a molecularlike interaction potential in laboratory 2D complex plasmas. We argue that this principal aim can be achieved by using relatively small microparticles and properly adjusting discharge parameters. If experimentally confirmed, this will make it possible to employ complex plasmas as a model system with an interaction potential resembling that of conventional liquids.

  9. Periodically sheared 2D Yukawa systems

    SciTech Connect

    Kovács, Anikó Zsuzsa; Hartmann, Peter; Donkó, Zoltán

    2015-10-15

    We present non-equilibrium molecular dynamics simulation studies on the dynamic (complex) shear viscosity of a 2D Yukawa system. We have identified a non-monotonic frequency dependence of the viscosity at high frequencies and shear rates, an energy absorption maximum (local resonance) at the Einstein frequency of the system at medium shear rates, an enhanced collective wave activity, when the excitation is near the plateau frequency of the longitudinal wave dispersion, and the emergence of significant configurational anisotropy at small frequencies and high shear rates.

  10. ENERGY LANDSCAPE OF 2D FLUID FORMS

    SciTech Connect

    Y. JIANG; ET AL

    2000-04-01

    The equilibrium states of 2D non-coarsening fluid foams, which consist of bubbles with fixed areas, correspond to local minima of the total perimeter. (1) The authors find an approximate value of the global minimum, and determine directly from an image how far a foam is from its ground state. (2) For (small) area disorder, small bubbles tend to sort inwards and large bubbles outwards. (3) Topological charges of the same sign repel while charges of opposite sign attract. (4) They discuss boundary conditions and the uniqueness of the pattern for fixed topology.

  11. A scalable 2-D parallel sparse solver

    SciTech Connect

    Kothari, S.C.; Mitra, S.

    1995-12-01

    Scalability beyond a small number of processors, typically 32 or less, is known to be a problem for existing parallel general sparse (PGS) direct solvers. This paper presents a parallel general sparse PGS direct solver for general sparse linear systems on distributed memory machines. The algorithm is based on the well-known sequential sparse algorithm Y12M. To achieve efficient parallelization, a 2-D scattered decomposition of the sparse matrix is used. The proposed algorithm is more scalable than existing parallel sparse direct solvers. Its scalability is evaluated on a 256 processor nCUBE2s machine using Boeing/Harwell benchmark matrices.

  12. 2D stepping drive for hyperspectral systems

    NASA Astrophysics Data System (ADS)

    Endrödy, Csaba; Mehner, Hannes; Grewe, Adrian; Sinzinger, Stefan; Hoffmann, Martin

    2015-07-01

    We present the design, fabrication and characterization of a compact 2D stepping microdrive for pinhole array positioning. The miniaturized solution enables a highly integrated compact hyperspectral imaging system. Based on the geometry of the pinhole array, an inch-worm drive with electrostatic actuators was designed resulting in a compact (1 cm2) positioning system featuring a step size of about 15 µm in a 170 µm displacement range. The high payload (20 mg) as required for the pinhole array and the compact system design exceed the known electrostatic inch-worm-based microdrives.

  13. Automatic brain cropping enhancement using active contours initialized by a PCNN

    NASA Astrophysics Data System (ADS)

    Swathanthira Kumar, Murali Murugavel; Sullivan, John M., Jr.

    2009-02-01

    Active contours are a popular medical image segmentation strategy. However in practice, its accuracy is dependent on the initialization of the process. The PCNN (Pulse Coupled Neural Network) algorithm developed by Eckhorn to model the observed synchronization of neural assemblies in small mammals such as cats allows for segmenting regions of similar intensity but it lacks a convergence criterion. In this paper we report a novel PCNN based strategy to initialize the zero level contour for automatic brain cropping of T2 weighted MRI image volumes of Long-Evans rats. Individual 2D anatomy slices of the rat brain volume were processed by means of a PCNN and a surrogate image 'signature' was constructed for each slice. By employing a previously trained artificial neural network (ANN) an approximate PCNN iteration (binary mask) was selected. This mask was then used to initialize a region based active contour model to crop the brain region. We tested this hybrid algorithm on 30 rat brain (256*256*12) volumes and compared the results against manually cropped gold standard. The Dice and Jaccard similarity indices were used for numerical evaluation of the proposed hybrid model. The highly successful system yielded an average of 0.97 and 0.94 respectively.

  14. Snow cover detection based on two-dimensional scatter plots from MODIS imagery data

    NASA Astrophysics Data System (ADS)

    Pan, Paipai; Chen, Guoyue; Saruta, Kazuki; Terata, Yuki

    2015-01-01

    Snow cover detection (SCD) using remote sensing imagery has received increasing attention since the development of satellite remote sensing technology. In the present work, a SCD method based on two-dimensional (2-D) scatter plots generated from MODIS imagery data over Akita Prefecture in Japan is proposed. The imagery of the study area is preprocessed, including a geographic correction, clipping, an atmospheric correction, and a topographic correction, before SCD is conducted. For this, snow and cloud pixels are extracted from other ground surface features according to a 2-D scatter plot of bands 1 and 3 in the reflectance spectrum. Finally, a snow cover map of Akita Prefecture is obtained after removal of the cloud pixels detected from a 2-D scatter plot of bands 6 and 7. Comparison and validation with AMeDAS in situ snow depth data from the study area shows that the average accuracy obtained from our proposed method represents an improvement of 11.79% over the MOD10A1 product, and 22.05% over the SCD results from a combination of normalized difference snow index and normalized difference vegetation index. In addition, Aomori Prefecture and Mt. Chokaizan are also evaluated as further tests of the proposed method. All results suggest that the proposed method is feasible for SCD in the study areas and can provide information for agricultural development, water resource management, and ecological environment construction.

  15. Response priming evidence for feedforward processing of snake contours but not of ladder contours and textures.

    PubMed

    Schmidt, Filipp; Vancleef, Kathleen

    2016-09-01

    In contour integration, increased difficulty in detection and shape discrimination of a chain of parallel elements (a ladder contour) compared to collinear elements (a snake contour) suggests more extensive processing of ladders than of snakes. In addition, conceptual similarities between ladders and textures - which also involve grouping of parallel elements - raises the question whether ladder and texture processing requires feedback from higher visual areas while snakes are processed in a fast feedforward sweep. We tested this in a response priming paradigm, where participants responded as quickly and accurately as possible to the orientation of a diagonal contour in a Gabor array (target). The diagonal was defined either by a snake, ladder, texture, or a continuous line. The target was preceded with varying stimulus onset asynchrony (SOA) by a prime that was either a snake, ladder, or texture, and was consistent or inconsistent to the response demands of the target. Resulting priming effects clearly distinguished between processing of snakes, ladders, and textures. Effects generally increased with SOA but were stronger for snakes and textures compared to ladders. Importantly, only priming effects for snakes were fully present already in the fastest response times, in accordance with a simple feedforward processing model. We conclude that snakes, ladders, and textures do not share similar processing characteristics, with snakes exhibiting a pronounced processing advantage. PMID:25771400

  16. Human body contour data based activity recognition.

    PubMed

    Myagmarbayar, Nergui; Yuki, Yoshida; Imamoglu, Nevrez; Gonzalez, Jose; Otake, Mihoko; Yu, Wenwei

    2013-01-01

    This research work is aimed to develop autonomous bio-monitoring mobile robots, which are capable of tracking and measuring patients' motions, recognizing the patients' behavior based on observation data, and providing calling for medical personnel in emergency situations in home environment. The robots to be developed will bring about cost-effective, safe and easier at-home rehabilitation to most motor-function impaired patients (MIPs). In our previous research, a full framework was established towards this research goal. In this research, we aimed at improving the human activity recognition by using contour data of the tracked human subject extracted from the depth images as the signal source, instead of the lower limb joint angle data used in the previous research, which are more likely to be affected by the motion of the robot and human subjects. Several geometric parameters, such as, the ratio of height to weight of the tracked human subject, and distance (pixels) between centroid points of upper and lower parts of human body, were calculated from the contour data, and used as the features for the activity recognition. A Hidden Markov Model (HMM) is employed to classify different human activities from the features. Experimental results showed that the human activity recognition could be achieved with a high correct rate. PMID:24111015

  17. Memory for pure tone sequences without contour.

    PubMed

    Lefebvre, Christine; Jolicœur, Pierre

    2016-06-01

    We presented pure tones interspersed with white noise sounds to disrupt contour perception in an acoustic short-term memory (ASTM) experiment during which we recorded the electroencephalogram. The memory set consisted of seven stimuli, 0, 1, 2, 3, or 4 of which were to-be-remembered tones. We estimated each participant׳s capacity, K, for each set size and measured the amplitude of the SAN (sustained anterior negativity, an ERP related to acoustic short-term memory). We correlated their K slopes with their SAN amplitude slopes as a function of set size, and found a significant link between performance and the SAN: a larger increase in SAN amplitude was linked with a larger number of stimuli maintained in ASTM. The SAN decreased in amplitude in the later portion of the silent retention interval, but the correlation between the SAN and capacity remained strong. These results show the SAN is not an index of contour but rather an index of the maintenance of individual objects in STM. This article is part of a Special Issue entitled SI: Auditory working memory. PMID:26903419

  18. PLOT3D/AMES, APOLLO UNIX VERSION USING GMR3D (WITH TURB3D)

    NASA Technical Reports Server (NTRS)

    Buning, P.

    1994-01-01

    five groups: 1) Grid Functions for grids, grid-checking, etc.; 2) Scalar Functions for contour or carpet plots of density, pressure, temperature, Mach number, vorticity magnitude, helicity, etc.; 3) Vector Functions for vector plots of velocity, vorticity, momentum, and density gradient, etc.; 4) Particle Trace Functions for rake-like plots of particle flow or vortex lines; and 5) Shock locations based on pressure gradient. TURB3D is a modification of PLOT3D which is used for viewing CFD simulations of incompressible turbulent flow. Input flow data consists of pressure, velocity and vorticity. Typical quantities to plot include local fluctuations in flow quantities and turbulent production terms, plotted in physical or wall units. PLOT3D/TURB3D includes both TURB3D and PLOT3D because the operation of TURB3D is identical to PLOT3D, and there is no additional sample data or printed documentation for TURB3D. Graphical capabilities of PLOT3D version 3.6b+ vary among the implementations available through COSMIC. Customers are encouraged to purchase and carefully review the PLOT3D manual before ordering the program for a specific computer and graphics library. There is only one manual for use with all implementations of PLOT3D, and although this manual generally assumes that the Silicon Graphics Iris implementation is being used, informative comments concerning other implementations appear throughout the text. With all implementations, the visual representation of the object and flow field created by PLOT3D consists of points, lines, and polygons. Points can be represented with dots or symbols, color can be used to denote data values, and perspective is used to show depth. Differences among implementations impact the program's ability to use graphical features that are based on 3D polygons, the user's ability to manipulate the graphical displays, and the user's ability to obtain alternate forms of output. The Apollo implementation of PLOT3D uses some of the capabilities of

  19. PLOT3D/AMES, APOLLO UNIX VERSION USING GMR3D (WITHOUT TURB3D)

    NASA Technical Reports Server (NTRS)

    Buning, P.

    1994-01-01

    five groups: 1) Grid Functions for grids, grid-checking, etc.; 2) Scalar Functions for contour or carpet plots of density, pressure, temperature, Mach number, vorticity magnitude, helicity, etc.; 3) Vector Functions for vector plots of velocity, vorticity, momentum, and density gradient, etc.; 4) Particle Trace Functions for rake-like plots of particle flow or vortex lines; and 5) Shock locations based on pressure gradient. TURB3D is a modification of PLOT3D which is used for viewing CFD simulations of incompressible turbulent flow. Input flow data consists of pressure, velocity and vorticity. Typical quantities to plot include local fluctuations in flow quantities and turbulent production terms, plotted in physical or wall units. PLOT3D/TURB3D includes both TURB3D and PLOT3D because the operation of TURB3D is identical to PLOT3D, and there is no additional sample data or printed documentation for TURB3D. Graphical capabilities of PLOT3D version 3.6b+ vary among the implementations available through COSMIC. Customers are encouraged to purchase and carefully review the PLOT3D manual before ordering the program for a specific computer and graphics library. There is only one manual for use with all implementations of PLOT3D, and although this manual generally assumes that the Silicon Graphics Iris implementation is being used, informative comments concerning other implementations appear throughout the text. With all implementations, the visual representation of the object and flow field created by PLOT3D consists of points, lines, and polygons. Points can be represented with dots or symbols, color can be used to denote data values, and perspective is used to show depth. Differences among implementations impact the program's ability to use graphical features that are based on 3D polygons, the user's ability to manipulate the graphical displays, and the user's ability to obtain alternate forms of output. The Apollo implementation of PLOT3D uses some of the capabilities of

  20. Analysis of group differences in processing speed: Brinley plots, Q-Q plots, and other conspiracies.

    PubMed

    Myerson, Joel; Adams, David R; Hale, Sandra; Jenkins, Lisa

    2003-03-01

    Researchers in a growing number of areas (including cognitive development, aging, and neuropsychology) use Brinley plots to compare the processing speed of different groups. Ratcliff, Spieler, and McKoon (2000) argued that a Brinley plot is a quantile-quantile (Q-Q) plot and that therefore Brinley plot regression slopes measure standard deviation ratios rather than relative speed of processing. We show that this argument is incorrect. Brinley plots, by definition, are not Q-Q plots; the former are based on unranked data and the latter are based on ranked data. Furthermore, the relationship between standard deviation ratios and slopes is a general property of regression lines and has no implications for the use of Brinley plot regression slopes as processing speed measures. We also show that the relative speed interpretation of Brinley plot slopes is strongly supported by converging evidence from a metaanalysis of visual search, mental rotation, and memory scanning in young and older adults. As to Ratcliff et al.'s hypothesis that age differences in response time are attributable to greater cautiousness on the part of the elderly, rather than true processing speed differences, this hypothesis has been extensively tested in previous studies and found wanting. PMID:12747512

  1. WFR-2D: an analytical model for PWAS-generated 2D ultrasonic guided wave propagation

    NASA Astrophysics Data System (ADS)

    Shen, Yanfeng; Giurgiutiu, Victor

    2014-03-01

    This paper presents WaveFormRevealer 2-D (WFR-2D), an analytical predictive tool for the simulation of 2-D ultrasonic guided wave propagation and interaction with damage. The design of structural health monitoring (SHM) systems and self-aware smart structures requires the exploration of a wide range of parameters to achieve best detection and quantification of certain types of damage. Such need for parameter exploration on sensor dimension, location, guided wave characteristics (mode type, frequency, wavelength, etc.) can be best satisfied with analytical models which are fast and efficient. The analytical model was constructed based on the exact 2-D Lamb wave solution using Bessel and Hankel functions. Damage effects were inserted in the model by considering the damage as a secondary wave source with complex-valued directivity scattering coefficients containing both amplitude and phase information from wave-damage interaction. The analytical procedure was coded with MATLAB, and a predictive simulation tool called WaveFormRevealer 2-D was developed. The wave-damage interaction coefficients (WDICs) were extracted from harmonic analysis of local finite element model (FEM) with artificial non-reflective boundaries (NRB). The WFR-2D analytical simulation results were compared and verified with full scale multiphysics finite element models and experiments with scanning laser vibrometer. First, Lamb wave propagation in a pristine aluminum plate was simulated with WFR-2D, compared with finite element results, and verified by experiments. Then, an inhomogeneity was machined into the plate to represent damage. Analytical modeling was carried out, and verified by finite element simulation and experiments. This paper finishes with conclusions and suggestions for future work.

  2. Microwave Assisted 2D Materials Exfoliation

    NASA Astrophysics Data System (ADS)

    Wang, Yanbin

    Two-dimensional materials have emerged as extremely important materials with applications ranging from energy and environmental science to electronics and biology. Here we report our discovery of a universal, ultrafast, green, solvo-thermal technology for producing excellent-quality, few-layered nanosheets in liquid phase from well-known 2D materials such as such hexagonal boron nitride (h-BN), graphite, and MoS2. We start by mixing the uniform bulk-layered material with a common organic solvent that matches its surface energy to reduce the van der Waals attractive interactions between the layers; next, the solutions are heated in a commercial microwave oven to overcome the energy barrier between bulk and few-layers states. We discovered the minutes-long rapid exfoliation process is highly temperature dependent, which requires precise thermal management to obtain high-quality inks. We hypothesize a possible mechanism of this proposed solvo-thermal process; our theory confirms the basis of this novel technique for exfoliation of high-quality, layered 2D materials by using an as yet unknown role of the solvent.

  3. Photocurrent spectroscopy of 2D materials

    NASA Astrophysics Data System (ADS)

    Cobden, David

    Confocal photocurrent measurements provide a powerful means of studying many aspects of the optoelectronic and electrical properties of a 2D device or material. At a diffraction-limited point they can provide a detailed absorption spectrum, and they can probe local symmetry, ultrafast relaxation rates and processes, electron-electron interaction strengths, and transport coefficients. We illustrate this with several examples, once being the photo-Nernst effect. In gapless 2D materials, such as graphene, in a perpendicular magnetic field a photocurrent antisymmetric in the field is generated near to the free edges, with opposite sign at opposite edges. Its origin is the transverse thermoelectric current associated with the laser-induced electron temperature gradient. This effect provides an unambiguous demonstration of the Shockley-Ramo nature of long-range photocurrent generation in gapless materials. It also provides a means of investigating quasiparticle properties. For example, in the case of graphene on hBN, it can be used to probe the Lifshitz transition that occurs due to the minibands formed by the Moire superlattice. We also observe and discuss photocurrent generated in other semimetallic (WTe2) and semiconducting (WSe2) monolayers. Work supported by DoE BES and NSF EFRI grants.

  4. Multienzyme Inkjet Printed 2D Arrays.

    PubMed

    Gdor, Efrat; Shemesh, Shay; Magdassi, Shlomo; Mandler, Daniel

    2015-08-19

    The use of printing to produce 2D arrays is well established, and should be relatively facile to adapt for the purpose of printing biomaterials; however, very few studies have been published using enzyme solutions as inks. Among the printing technologies, inkjet printing is highly suitable for printing biomaterials and specifically enzymes, as it offers many advantages. Formulation of the inkjet inks is relatively simple and can be adjusted to a variety of biomaterials, while providing nonharmful environment to the enzymes. Here we demonstrate the applicability of inkjet printing for patterning multiple enzymes in a predefined array in a very straightforward, noncontact method. Specifically, various arrays of the enzymes glucose oxidase (GOx), invertase (INV) and horseradish peroxidase (HP) were printed on aminated glass surfaces, followed by immobilization using glutardialdehyde after printing. Scanning electrochemical microscopy (SECM) was used for imaging the printed patterns and to ascertain the enzyme activity. The successful formation of 2D arrays consisting of enzymes was explored as a means of developing the first surface confined enzyme based logic gates. Principally, XOR and AND gates, each consisting of two enzymes as the Boolean operators, were assembled, and their operation was studied by SECM. PMID:26214072

  5. KINETICS MODEL AND OZONE ISOPLETH PLOTTING PACKAGE

    EPA Science Inventory

    The Kinetics Model and Ozone Isopleth Plotting Package (OZIPP) computer program can be used to simulate ozone formation in urban atmospheres. OZIPP calculates maximum one-hour average ozone concentrations given a set of input assumptions about initial precursor concentrations, li...

  6. PLOT3D- DRAWING THREE DIMENSIONAL SURFACES

    NASA Technical Reports Server (NTRS)

    Canright, R. B.

    1994-01-01

    PLOT3D is a package of programs to draw three-dimensional surfaces of the form z = f(x,y). The function f and the boundary values for x and y are the input to PLOT3D. The surface thus defined may be drawn after arbitrary rotations. However, it is designed to draw only functions in rectangular coordinates expressed explicitly in the above form. It cannot, for example, draw a sphere. Output is by off-line incremental plotter or online microfilm recorder. This package, unlike other packages, will plot any function of the form z = f(x,y) and portrays continuous and bounded functions of two independent variables. With curve fitting; however, it can draw experimental data and pictures which cannot be expressed in the above form. The method used is division into a uniform rectangular grid of the given x and y ranges. The values of the supplied function at the grid points (x, y) are calculated and stored; this defines the surface. The surface is portrayed by connecting successive (y,z) points with straight-line segments for each x value on the grid and, in turn, connecting successive (x,z) points for each fixed y value on the grid. These lines are then projected by parallel projection onto the fixed yz-plane for plotting. This program has been implemented on the IBM 360/67 with on-line CDC microfilm recorder.

  7. IRIS Spectrum Line Plot - Numeric Simulation

    NASA Video Gallery

    This video is similar to the IRIS Spectrum Line Plot video at http://www.youtube.com/watch?v=E4V_vF3qMSI, but now as derived from a numerical simulation of the Sun by the University of Oslo. Credit...

  8. Purging Plot from Film and Literature Courses.

    ERIC Educational Resources Information Center

    Peavler, Terry J.

    1983-01-01

    Argues that film and literature courses must get beyond discussions of plot to explorations of narrative perspective and structure, communication techniques, and critical methodologies in order to give students an awareness of the inherent natures, limitations, and possibilities of film and literature. (DMM)

  9. Advanced Bode Plot Techniques for Ultrasonic Transducers

    NASA Astrophysics Data System (ADS)

    DeAngelis, D. A.; Schulze, G. W.

    The Bode plot, displayed as either impedance or admittance versus frequency, is the most basic test used by ultrasonic transducer designers. With simplicity and ease-of-use, Bode plots are ideal for baseline comparisons such as spacing of parasitic modes or impedance, but quite often the subtleties that manifest as poor process control are hard to interpret or are nonexistence. In-process testing of transducers is time consuming for quantifying statistical aberrations, and assessments made indirectly via the workpiece are difficult. This research investigates the use of advanced Bode plot techniques to compare ultrasonic transducers with known "good" and known "bad" process performance, with the goal of a-priori process assessment. These advanced techniques expand from the basic constant voltage versus frequency sweep to include constant current and constant velocity interrogated locally on transducer or tool; they also include up and down directional frequency sweeps to quantify hysteresis effects like jumping and dropping phenomena. The investigation focuses solely on the common PZT8 piezoelectric material used with welding transducers for semiconductor wire bonding. Several metrics are investigated such as impedance, displacement/current gain, velocity/current gain, displacement/voltage gain and velocity/voltage gain. The experimental and theoretical research methods include Bode plots, admittance loops, laser vibrometry and coupled-field finite element analysis.

  10. Study of Plot in English. [Computer Diskette].

    ERIC Educational Resources Information Center

    Hughes, Tony

    Part of a three-program set, this computer software provides a comprehensive range of generic questions on plot in literature. The program is comprised of: 150 questions sorted into 14 categories; supporting ideological commentary classifying question types; and a user-friendly program enabling worksheet production. It is underpinned by a Critical…

  11. A reduced volumetric expansion factor plot

    NASA Technical Reports Server (NTRS)

    Hendricks, R. C.

    1979-01-01

    A reduced volumetric expansion factor plot has been constructed for simple fluids which is suitable for engineering computations in heat transfer. Volumetric expansion factors have been found useful in correlating heat transfer data over a wide range of operating conditions including liquids, gases and the near critical region.

  12. A reduced volumetric expansion factor plot

    NASA Technical Reports Server (NTRS)

    Hendricks, R. C.

    1979-01-01

    A reduced volumetric expansion factor plot was constructed for simple fluids which is suitable for engineering computations in heat transfer. Volumetric expansion factors were found useful in correlating heat transfer data over a wide range of operating conditions including liquids, gases and the near critical region.

  13. Comparing Box Plot Distributions: A Teacher's Reasoning

    ERIC Educational Resources Information Center

    Pfannkuch, Maxine

    2006-01-01

    Drawing conclusions from the comparison of datasets using informal statistical inference is a challenging task since the nature and type of reasoning expected is not fully understood. In this paper a secondary teacher's reasoning from the comparison of box plot distributions during the teaching of a Year 11 (15-year-old) class is analyzed. From…

  14. Tracking Epithelial Cell Junctions in C. elegans Embryogenesis With Active Contours Guided by SIFT Flow

    PubMed Central

    Lee, Chen-Yu; Gonçalves, Monira; Chisholm, Andrew D.; Cosman, Pamela C.

    2015-01-01

    Quantitative analysis of cell shape in live samples is an important goal in developmental biology. Automated or semiautomated segmentation and tracking of cell nuclei has been successfully implemented in several biological systems. Segmentation and tracking of cell surfaces has been more challenging. Here, we present a new approach to tracking cell junctions in the developing epidermis of C. elegans embryos. Epithelial junctions as visualized with DLG-1::GFP form lines at the subapical circumference of differentiated epidermal cells and delineate changes in epidermal cell shape and position. We develop and compare two approaches for junction segmentation. For the first method (projection approach), 3-D cell boundaries are projected into 2D for segmentation using active contours with a nonintersecting force, and subsequently tracked using scale-invariant feature transform (SIFT) flow. The resulting 2-D tracked boundaries are then back-projected into 3-D space. The second method (volumetric approach) uses a 3-D extended version of active contours guided by SIFT flow in 3-D space. In both methods, cell junctions are manually located at the first time point and tracked in a fully automated way for the remainder of the video. Using these methods, we have generated the first quantitative description of ventral epidermal cell movements and shape changes during epidermal enclosure. PMID:24771564

  15. 2-D or not 2-D, that is the question: A Northern California test

    SciTech Connect

    Mayeda, K; Malagnini, L; Phillips, W S; Walter, W R; Dreger, D

    2005-06-06

    Reliable estimates of the seismic source spectrum are necessary for accurate magnitude, yield, and energy estimation. In particular, how seismic radiated energy scales with increasing earthquake size has been the focus of recent debate within the community and has direct implications on earthquake source physics studies as well as hazard mitigation. The 1-D coda methodology of Mayeda et al. has provided the lowest variance estimate of the source spectrum when compared against traditional approaches that use direct S-waves, thus making it ideal for networks that have sparse station distribution. The 1-D coda methodology has been mostly confined to regions of approximately uniform complexity. For larger, more geophysically complicated regions, 2-D path corrections may be required. The complicated tectonics of the northern California region coupled with high quality broadband seismic data provides for an ideal ''apples-to-apples'' test of 1-D and 2-D path assumptions on direct waves and their coda. Using the same station and event distribution, we compared 1-D and 2-D path corrections and observed the following results: (1) 1-D coda results reduced the amplitude variance relative to direct S-waves by roughly a factor of 8 (800%); (2) Applying a 2-D correction to the coda resulted in up to 40% variance reduction from the 1-D coda results; (3) 2-D direct S-wave results, though better than 1-D direct waves, were significantly worse than the 1-D coda. We found that coda-based moment-rate source spectra derived from the 2-D approach were essentially identical to those from the 1-D approach for frequencies less than {approx}0.7-Hz, however for the high frequencies (0.7{le} f {le} 8.0-Hz), the 2-D approach resulted in inter-station scatter that was generally 10-30% smaller. For complex regions where data are plentiful, a 2-D approach can significantly improve upon the simple 1-D assumption. In regions where only 1-D coda correction is available it is still preferable over 2

  16. Noninvasive and minimally invasive techniques in body contouring.

    PubMed

    Afrooz, Paul N; Pozner, Jason N; DiBernardo, Barry E

    2014-10-01

    Major surgical body contouring procedures have several inherent drawbacks, including hospitalization, anesthetic use, pain, swelling, and prolonged recovery. It is for these reasons that body contouring through noninvasive and minimally invasive methods has become one of the most alluring areas in aesthetic surgery. Patient expectations and demands have driven the field toward safer, less-invasive procedures with less discomfort, fewer complications, and a shorter recovery. In this article, the current minimally invasive and noninvasive modalities for body contouring are reviewed. PMID:25283463

  17. Effects of Spatial Frequency Similarity and Dissimilarity on Contour Integration

    PubMed Central

    Persike, Malte; Meinhardt, Günter

    2015-01-01

    We examined the effects of spatial frequency similarity and dissimilarity on human contour integration under various conditions of uncertainty. Participants performed a temporal 2AFC contour detection task. Spatial frequency jitter up to 3.0 octaves was applied either to background elements, or to contour and background elements, or to none of both. Results converge on four major findings. (1) Contours defined by spatial frequency similarity alone are only scarcely visible, suggesting the absence of specialized cortical routines for shape detection based on spatial frequency similarity. (2) When orientation collinearity and spatial frequency similarity are combined along a contour, performance amplifies far beyond probability summation when compared to the fully heterogenous condition but only to a margin compatible with probability summation when compared to the fully homogenous case. (3) Psychometric functions are steeper but not shifted for homogenous contours in heterogenous backgrounds indicating an advantageous signal-to-noise ratio. The additional similarity cue therefore not so much improves contour detection performance but primarily reduces observer uncertainty about whether a potential candidate is a contour or just a false positive. (4) Contour integration is a broadband mechanism which is only moderately impaired by spatial frequency dissimilarity. PMID:26057620

  18. Contour identification with pitch and loudness cues using cochlear implants.

    PubMed

    Luo, Xin; Masterson, Megan E; Wu, Ching-Chih

    2014-01-01

    Different from speech, pitch and loudness cues may or may not co-vary in music. Cochlear implant (CI) users with poor pitch perception may use loudness contour cues more than normal-hearing (NH) listeners. Contour identification was tested in CI users and NH listeners; the five-note contours contained either pitch cues alone, loudness cues alone, or both. Results showed that NH listeners' contour identification was better with pitch cues than with loudness cues; CI users performed similarly with either cues. When pitch and loudness cues were co-varied, CI performance significantly improved, suggesting that CI users were able to integrate the two cues. PMID:24437857

  19. FLOWCHART; a computer program for plotting flowcharts

    USGS Publications Warehouse

    Bender, Bernice

    1982-01-01

    The computer program FLOWCHART can be used to very quickly and easily produce flowcharts of high quality for publication. FLOWCHART centers each element or block of text that it processes on one of a set of (imaginary) vertical lines. It can enclose a text block in a rectangle, circle or other selected figure. It can draw a 'line connecting the midpoint of any side of any figure with the midpoint of any side of any other figure and insert an arrow pointing in the direction of flow. It can write 'yes' or 'no' next to the line joining two figures. FLOWCHART creates flowcharts using some basic plotting subroutine* which permit plots to be generated interactively and inspected on a Tektronix compatible graphics screen or plotted in a deferred mode on a Houston Instruments 42' pen plotter. The size of the plot, character set and character height in inches are inputs to the program. Plots generated using the pen plotter can be up to 42' high--the larger size plots being directly usable as visual aids in a talk. FLOWCHART centers each block of text on an imaginary column line. (The number of columns and column width are specified as input.) The midpoint of the longest line of text within the block is defined to be the center of the block and is placed on the column line. The spacing of individual words within the block is not altered when the block is positioned. The program writes the first block of text in a designated column and continues placing each subsequent block below the previous block in the same column. A block of text may be placed in a different column by specifying the number of the column and an earlier block of text with which the new block is to be aligned. If block zero is given as the earlier block, the new text is placed in the new column continuing down the page below the previous block. Optionally a column and number of inches from the top of the page may be given for positioning the next block of text. The program will normally draw one of five

  20. Numerical Evaluation of 2D Ground States

    NASA Astrophysics Data System (ADS)

    Kolkovska, Natalia

    2016-02-01

    A ground state is defined as the positive radial solution of the multidimensional nonlinear problem \\varepsilon propto k_ bot 1 - ξ with the function f being either f(u) =a|u|p-1u or f(u) =a|u|pu+b|u|2pu. The numerical evaluation of ground states is based on the shooting method applied to an equivalent dynamical system. A combination of fourth order Runge-Kutta method and Hermite extrapolation formula is applied to solving the resulting initial value problem. The efficiency of this procedure is demonstrated in the 1D case, where the maximal difference between the exact and numerical solution is ≈ 10-11 for a discretization step 0:00025. As a major application, we evaluate numerically the critical energy constant. This constant is defined as a functional of the ground state and is used in the study of the 2D Boussinesq equations.

  1. Canard configured aircraft with 2-D nozzle

    NASA Technical Reports Server (NTRS)

    Child, R. D.; Henderson, W. P.

    1978-01-01

    A closely-coupled canard fighter with vectorable two-dimensional nozzle was designed for enhanced transonic maneuvering. The HiMAT maneuver goal of a sustained 8g turn at a free-stream Mach number of 0.9 and 30,000 feet was the primary design consideration. The aerodynamic design process was initiated with a linear theory optimization minimizing the zero percent suction drag including jet effects and refined with three-dimensional nonlinear potential flow techniques. Allowances were made for mutual interference and viscous effects. The design process to arrive at the resultant configuration is described, and the design of a powered 2-D nozzle model to be tested in the LRC 16-foot Propulsion Wind Tunnel is shown.

  2. 2D Electrostatic Actuation of Microshutter Arrays

    NASA Technical Reports Server (NTRS)

    Burns, Devin E.; Oh, Lance H.; Li, Mary J.; Jones, Justin S.; Kelly, Daniel P.; Zheng, Yun; Kutyrev, Alexander S.; Moseley, Samuel H.

    2015-01-01

    An electrostatically actuated microshutter array consisting of rotational microshutters (shutters that rotate about a torsion bar) were designed and fabricated through the use of models and experiments. Design iterations focused on minimizing the torsional stiffness of the microshutters, while maintaining their structural integrity. Mechanical and electromechanical test systems were constructed to measure the static and dynamic behavior of the microshutters. The torsional stiffness was reduced by a factor of four over initial designs without sacrificing durability. Analysis of the resonant behavior of the microshutter arrays demonstrates that the first resonant mode is a torsional mode occurring around 3000 Hz. At low vacuum pressures, this resonant mode can be used to significantly reduce the drive voltage necessary for actuation requiring as little as 25V. 2D electrostatic latching and addressing was demonstrated using both a resonant and pulsed addressing scheme.

  3. 2D Electrostatic Actuation of Microshutter Arrays

    NASA Technical Reports Server (NTRS)

    Burns, Devin E.; Oh, Lance H.; Li, Mary J.; Kelly, Daniel P.; Kutyrev, Alexander S.; Moseley, Samuel H.

    2015-01-01

    Electrostatically actuated microshutter arrays consisting of rotational microshutters (shutters that rotate about a torsion bar) were designed and fabricated through the use of models and experiments. Design iterations focused on minimizing the torsional stiffness of the microshutters, while maintaining their structural integrity. Mechanical and electromechanical test systems were constructed to measure the static and dynamic behavior of the microshutters. The torsional stiffness was reduced by a factor of four over initial designs without sacrificing durability. Analysis of the resonant behavior of the microshutters demonstrates that the first resonant mode is a torsional mode occurring around 3000 Hz. At low vacuum pressures, this resonant mode can be used to significantly reduce the drive voltage necessary for actuation requiring as little as 25V. 2D electrostatic latching and addressing was demonstrated using both a resonant and pulsed addressing scheme.

  4. Graphene suspensions for 2D printing

    NASA Astrophysics Data System (ADS)

    Soots, R. A.; Yakimchuk, E. A.; Nebogatikova, N. A.; Kotin, I. A.; Antonova, I. V.

    2016-04-01

    It is shown that, by processing a graphite suspension in ethanol or water by ultrasound and centrifuging, it is possible to obtain particles with thicknesses within 1-6 nm and, in the most interesting cases, 1-1.5 nm. Analogous treatment of a graphite suspension in organic solvent yields eventually thicker particles (up to 6-10 nm thick) even upon long-term treatment. Using the proposed ink based on graphene and aqueous ethanol with ethylcellulose and terpineol additives for 2D printing, thin (~5 nm thick) films with sheet resistance upon annealing ~30 MΩ/□ were obtained. With the ink based on aqueous graphene suspension, the sheet resistance was ~5-12 kΩ/□ for 6- to 15-nm-thick layers with a carrier mobility of ~30-50 cm2/(V s).

  5. PetroPlot: A plotting and data management tool set for Microsoft Excel

    NASA Astrophysics Data System (ADS)

    Su, Yongjun; Langmuir, Charles H.; Asimow, Paul D.

    2003-03-01

    PetroPlot is a 4000-line software code written in Visual Basic for the spreadsheet program Excel that automates plotting and data management tasks for large amount of data. The major plotting functions include: automation of large numbers of multiseries XY plots; normalized diagrams (e.g., spider diagrams); replotting of any complex formatted diagram with multiple series for any other axis parameters; addition of customized labels for individual data points; and labeling flexible log scale axes. Other functions include: assignment of groups for samples based on multiple customized criteria; removal of nonnumeric values; calculation of averages/standard deviations; calculation of correlation matrices; deletion of nonconsecutive rows; and compilation of multiple rows of data for a single sample to single rows appropriate for plotting. A cubic spline function permits curve fitting to complex time series, and comparison of data to the fits. For users of Excel, PetroPlot increases efficiency of data manipulation and visualization by orders of magnitude and allows exploration of large data sets that would not be possible making plots individually. The source codes are open to all users.

  6. Metrology for graphene and 2D materials

    NASA Astrophysics Data System (ADS)

    Pollard, Andrew J.

    2016-09-01

    The application of graphene, a one atom-thick honeycomb lattice of carbon atoms with superlative properties, such as electrical conductivity, thermal conductivity and strength, has already shown that it can be used to benefit metrology itself as a new quantum standard for resistance. However, there are many application areas where graphene and other 2D materials, such as molybdenum disulphide (MoS2) and hexagonal boron nitride (h-BN), may be disruptive, areas such as flexible electronics, nanocomposites, sensing and energy storage. Applying metrology to the area of graphene is now critical to enable the new, emerging global graphene commercial world and bridge the gap between academia and industry. Measurement capabilities and expertise in a wide range of scientific areas are required to address this challenge. The combined and complementary approach of varied characterisation methods for structural, chemical, electrical and other properties, will allow the real-world issues of commercialising graphene and other 2D materials to be addressed. Here, examples of metrology challenges that have been overcome through a multi-technique or new approach are discussed. Firstly, the structural characterisation of defects in both graphene and MoS2 via Raman spectroscopy is described, and how nanoscale mapping of vacancy defects in graphene is also possible using tip-enhanced Raman spectroscopy (TERS). Furthermore, the chemical characterisation and removal of polymer residue on chemical vapour deposition (CVD) grown graphene via secondary ion mass spectrometry (SIMS) is detailed, as well as the chemical characterisation of iron films used to grow large domain single-layer h-BN through CVD growth, revealing how contamination of the substrate itself plays a role in the resulting h-BN layer. In addition, the role of international standardisation in this area is described, outlining the current work ongoing in both the International Organization of Standardization (ISO) and the

  7. The mouse ruby-eye 2(d) (ru2(d) /Hps5(ru2-d) ) allele inhibits eumelanin but not pheomelanin synthesis.

    PubMed

    Hirobe, Tomohisa; Ito, Shosuke; Wakamatsu, Kazumasa

    2013-09-01

    The novel mutation named ru2(d) /Hps5(ru2-d) , characterized by light-colored coats and ruby-eyes, prohibits differentiation of melanocytes by inhibiting tyrosinase (Tyr) activity, expression of Tyr, Tyr-related protein 1 (Tyrp1), Tyrp2, and Kit. However, it is not known whether the ru2(d) allele affects pheomelanin synthesis in recessive yellow (e/Mc1r(e) ) or in pheomelanic stage in agouti (A) mice. In this study, effects of the ru2(d) allele on pheomelanin synthesis were investigated by chemical analysis of melanin present in dorsal hairs of 5-week-old mice from F2 generation between C57BL/10JHir (B10)-co-isogenic ruby-eye 2(d) and B10-congenic recessive yellow or agouti. Eumelanin content was decreased in ruby-eye 2(d) and ruby-eye 2(d) agouti mice, whereas pheomelanin content in ruby-eye 2(d) recessive yellow and ruby-eye 2(d) agouti mice did not differ from the corresponding Ru2(d) /- mice, suggesting that the ru2(d) allele inhibits eumelanin but not pheomelanin synthesis. PMID:23672590

  8. Vorticity generation by contoured wall injectors

    NASA Technical Reports Server (NTRS)

    Waitz, Ian A.; Marble, Frank E.; Zukoski, Edward E.

    1992-01-01

    A class of contoured wall fuel injectors was designed to enable shock-enhancement of hypervelocity mixing for supersonic combustion ramjet applications. Previous studies of these geometries left unresolved questions concerning the relative importance of various axial vorticity sources in mixing the injectant with the freestream. The present study is a numerical simulation of two generic fuel injectors which is aimed at elucidating the relative roles of axial vorticity sources including: baroclinic torque through shock-impingement, cross-stream shear, turning of boundary layer vorticity, shock curvature, and diffusive flux. Both the magnitude of the circulation, and the location of vorticity with respect to the mixing interface were considered. Baroclinic torque and cross-stream shear were found to be most important in convectively mixing the injectant with the freestream, with the former providing for deposition of vorticity directly on the fuel/air interface.

  9. The aperture problem in contoured stimuli

    PubMed Central

    Kane, David; Bex, Peter J.; Dakin, Steven C.

    2010-01-01

    A moving object elicits responses from V1 neurons tuned to a broad range of locations, directions, and spatiotemporal frequencies. Global pooling of such signals can overcome their intrinsic ambiguity in relation to the object’s direction/speed (the “aperture problem”); here we examine the role of low-spatial frequencies (SF) and second-order statistics in this process. Subjects made a 2AFC fine direction-discrimination judgement of ‘naturally’ contoured stimuli viewed rigidly translating behind a series of small circular apertures. This configuration allowed us to manipulate the scene in several ways; by randomly switching which portion of the stimulus was presented behind each aperture or by occluding certain spatial frequency bands. We report that global motion integration is (a) largely insensitive to the second-order statistics of such stimuli and (b) is rigidly broadband even in the presence of a disrupted low SF component. PMID:19810794

  10. Loran-C plotting program for plotting lines of position on standard charts

    NASA Technical Reports Server (NTRS)

    Roman, J. P.

    1981-01-01

    A set of programs used to plot Loran C lines of position on any common map or standard aviation sectional chart are given. The Loran C plotting program JRPLOT FORTRAN uses a standard Calcomp compatible plotting subroutine package for the Hewlett-Packard 7203A graphic plotter. The programs are designed to be run on an IBM System 370 computer. A simple add subtract method is used to calculate the lines of position. A description of how to use the program and some methods of operation are given.

  11. Plot of virtual surgery based on CT medical images

    NASA Astrophysics Data System (ADS)

    Song, Limei; Zhang, Chunbo

    2009-10-01

    Although the CT device can give the doctors a series of 2D medical images, it is difficult to give vivid view for the doctors to acknowledge the decrease part. In order to help the doctors to plot the surgery, the virtual surgery system is researched based on the three-dimensional visualization technique. After the disease part of the patient is scanned by the CT device, the 3D whole view will be set up based on the 3D reconstruction module of the system. TCut a part is the usually used function for doctors in the real surgery. A curve will be created on the 3D space; and some points can be added on the curve automatically or manually. The position of the point can change the shape of the cut curves. The curve can be adjusted by controlling the points. If the result of the cut function is not satisfied, all the operation can be cancelled to restart. The flexible virtual surgery gives more convenience to the real surgery. Contrast to the existing medical image process system, the virtual surgery system is added to the system, and the virtual surgery can be plotted for a lot of times, till the doctors have enough confidence to start the real surgery. Because the virtual surgery system can give more 3D information of the disease part, some difficult surgery can be discussed by the expert doctors in different city via internet. It is a useful function to understand the character of the disease part, thus to decrease the surgery risk.

  12. Application and histology-driven refinement of active contour models to functional region and nerve delineation: towards a digital brainstem atlas

    NASA Astrophysics Data System (ADS)

    Patel, Nirmal; Sultana, Sharmin; Rashid, Tanweer; Krusienski, Dean; Audette, Michel A.

    2015-03-01

    This paper presents a methodology for the digital formatting of a printed atlas of the brainstem and the delineation of cranial nerves from this digital atlas. It also describes on-going work on the 3D resampling and refinement of the 2D functional regions and nerve contours. In MRI-based anatomical modeling for neurosurgery planning and simulation, the complexity of the functional anatomy entails a digital atlas approach, rather than less descriptive voxel or surface-based approaches. However, there is an insufficiency of descriptive digital atlases, in particular of the brainstem. Our approach proceeds from a series of numbered, contour-based sketches coinciding with slices of the brainstem featuring both closed and open contours. The closed contours coincide with functionally relevant regions, whereby our objective is to fill in each corresponding label, which is analogous to painting numbered regions in a paint-by-numbers kit. Any open contour typically coincides with a cranial nerve. This 2D phase is needed in order to produce densely labeled regions that can be stacked to produce 3D regions, as well as identifying the embedded paths and outer attachment points of cranial nerves. Cranial nerves are modeled using an explicit contour based technique called 1-Simplex. The relevance of cranial nerves modeling of this project is two-fold: i) this atlas will fill a void left by the brain segmentation communities, as no suitable digital atlas of the brainstem exists, and ii) this atlas is necessary to make explicit the attachment points of major nerves (except I and II) having a cranial origin. Keywords: digital atlas, contour models, surface models

  13. An exploratory drilling exhaustion sequence plot program

    USGS Publications Warehouse

    Schuenemeyer, J.H.; Drew, L.J.

    1977-01-01

    The exhaustion sequence plot program computes the conditional area of influence for wells in a specified rectangular region with respect to a fixed-size deposit. The deposit is represented by an ellipse whose size is chosen by the user. The area of influence may be displayed on computer printer plots consisting of a maximum of 10,000 grid points. At each point, a symbol is presented that indicates the probability of that point being exhausted by nearby wells with respect to a fixed-size ellipse. This output gives a pictorial view of the manner in which oil fields are exhausted. In addition, the exhaustion data may be used to estimate the number of deposits remaining in a basin. ?? 1977.

  14. External Use of TOPCAT's Plotting Library

    NASA Astrophysics Data System (ADS)

    Taylor, M. B.

    2015-09-01

    The table analysis application TOPCAT uses a custom Java plotting library for highly configurable high-performance interactive or exported visualisations in two and three dimensions. We present here a variety of ways for end users or application developers to make use of this library outside of the TOPCAT application: via the command-line suite STILTS or its Jython variant JyStilts, via a traditional Java API, or by programmatically assigning values to a set of parameters in java code or using some form of inter-process communication. The library has been built with large datasets in mind; interactive plots scale well up to several million points, and static output to standard graphics formats is possible for unlimited sized input data.

  15. Kinetic plots for programmed temperature gas chromatography.

    PubMed

    Jespers, Sander; Roeleveld, Kevin; Lynen, Frederic; Broeckhoven, Ken; Desmet, Gert

    2016-06-10

    The applicability of the kinetic plot theory to temperature-programmed gas chromatography (GC) has been confirmed experimentally by measuring the efficiency of a temperature gradient separation of a simple test mixture on 15, 30, 60 and 120m long (coupled) columns. It has been shown that the temperature-dependent data needed for the kinetic plot calculation can be obtained from isothermal experiments at the significant temperature, a temperature that characterizes the entire gradient run. Furthermore, optimal flow rates have been calculated for various combinations of column length, diameter, and operating temperature (or significant temperature). The tabulated outcome of these calculations provide good starting points for the optimization of any GC separation. PMID:27179678

  16. Reads and Plots PCM Data Files

    1999-08-23

    WINPLOT21 reads and plots PCM (Pulse code modulated) data files. The data files must contain the PCM data formatted per IRIG 106 Telemetry standards. The contents of the data files are interpreted using information found in ancillary calibration file that can be created using a Calibration Wizard feature of this program. PCM data is read in and scaled to engineering units. First and second order equations are applied to the engineering units. The user hasmore » the option of plotting the raw PCM counts, engineering units, integrated engineering units, or second order integration of the engineering units. A Butterworth filter can be applied to the engineering units if the source of the data is not a PCM subcommed channel. Scroll bars allow for zooming in along both the x and y axis.« less

  17. Realtime multi-plot graphics system

    NASA Technical Reports Server (NTRS)

    Shipkowski, Michael S.

    1990-01-01

    The increased complexity of test operations and customer requirements at Langley Research Center's National Transonic Facility (NTF) surpassed the capabilities of the initial realtime graphics system. The analysis of existing hardware and software and the enhancements made to develop a new realtime graphics system are described. The result of this effort is a cost effective system, based on hardware already in place, that support high speed, high resolution, generation and display of multiple realtime plots. The enhanced graphics system (EGS) meets the current and foreseeable future realtime graphics requirements of the NTF. While this system was developed to support wind tunnel operations, the overall design and capability of the system is applicable to other realtime data acquisition systems that have realtime plot requirements.

  18. Combining prior day contours to improve automated prostate segmentation

    SciTech Connect

    Godley, Andrew; Sheplan Olsen, Lawrence J.; Stephans, Kevin; Zhao Anzi

    2013-02-15

    Purpose: To improve the accuracy of automatically segmented prostate, rectum, and bladder contours required for online adaptive therapy. The contouring accuracy on the current image guidance [image guided radiation therapy (IGRT)] scan is improved by combining contours from earlier IGRT scans via the simultaneous truth and performance level estimation (STAPLE) algorithm. Methods: Six IGRT prostate patients treated with daily kilo-voltage (kV) cone-beam CT (CBCT) had their original plan CT and nine CBCTs contoured by the same physician. Three types of automated contours were produced for analysis. (1) Plan: By deformably registering the plan CT to each CBCT and then using the resulting deformation field to morph the plan contours to match the CBCT anatomy. (2) Previous: The contour set drawn by the physician on the previous day CBCT is similarly deformed to match the current CBCT anatomy. (3) STAPLE: The contours drawn by the physician, on each prior CBCT and the plan CT, are deformed to match the CBCT anatomy to produce multiple contour sets. These sets are combined using the STAPLE algorithm into one optimal set. Results: Compared to plan and previous, STAPLE improved the average Dice's coefficient (DC) with the original physician drawn CBCT contours to a DC as follows: Bladder: 0.81 {+-} 0.13, 0.91 {+-} 0.06, and 0.92 {+-} 0.06; Prostate: 0.75 {+-} 0.08, 0.82 {+-} 0.05, and 0.84 {+-} 0.05; and Rectum: 0.79 {+-} 0.06, 0.81 {+-} 0.06, and 0.85 {+-} 0.04, respectively. The STAPLE results are within intraobserver consistency, determined by the physician blindly recontouring a subset of CBCTs. Comparing plans recalculated using the physician and STAPLE contours showed an average disagreement less than 1% for prostate D98 and mean dose, and 5% and 3% for bladder and rectum mean dose, respectively. One scan takes an average of 19 s to contour. Using five scans plus STAPLE takes less than 110 s on a 288 core graphics processor unit. Conclusions: Combining the plan and

  19. Extended quantification of the generalized recurrence plot

    NASA Astrophysics Data System (ADS)

    Riedl, Maik; Marwan, Norbert; Kurths, Jürgen

    2016-04-01

    The generalized recurrence plot is a modern tool for quantification of complex spatial patterns. Its application spans the analysis of trabecular bone structures, Turing structures, turbulent spatial plankton patterns, and fractals. But, it is also successfully applied to the description of spatio-temporal dynamics and the detection of regime shifts, such as in the complex Ginzburg-Landau- equation. The recurrence plot based determinism is a central measure in this framework quantifying the level of regularities in temporal and spatial structures. We extend this measure for the generalized recurrence plot considering additional operations of symmetry than the simple translation. It is tested not only on two-dimensional regular patterns and noise but also on complex spatial patterns reconstructing the parameter space of the complex Ginzburg-Landau-equation. The extended version of the determinism resulted in values which are consistent to the original recurrence plot approach. Furthermore, the proposed method allows a split of the determinism into parts which based on laminar and non-laminar regions of the two-dimensional pattern of the complex Ginzburg-Landau-equation. A comparison of these parts with a standard method of image classification, the co-occurrence matrix approach, shows differences especially in the description of patterns associated with turbulence. In that case, it seems that the extended version of the determinism allows a distinction of phase turbulence and defect turbulence by means of their spatial patterns. This ability of the proposed method promise new insights in other systems with turbulent dynamics coming from climatology, biology, ecology, and social sciences, for example.

  20. Intensive Site 1 Vegetation Plot Photos 2012

    SciTech Connect

    Norby, Richard; Sloan, Victoria

    2015-04-02

    Photographs were taken on 24th June, 15th July and 17th August 2012, using a Canon Ixus 70 7.1 megapixel digital camera. Photographs were taken during the recording of weekly soil moisture, temperature and thaw depth measurements (Sloan et al., 2014), over a time period spanning approximately 6 hours on each day. Photographs were taken from positions where matted trail allowed access to vegetation plots.

  1. Phasor plots of luminescence decay functions

    NASA Astrophysics Data System (ADS)

    Berberan-Santos, Mário N.

    2015-03-01

    Luminescence decay functions describe the time dependence of the intensity of radiation emitted by electronically excited species. Decay phasor plots (plots of the Fourier sine transform vs. the Fourier cosine transform, for one or several angular frequencies) are being increasingly used in fluorescence, namely in lifetime imaging microscopy (FLIM). In this work, a detailed study of the sum of two exponentials decay function is carried out revealing that sub-exponential, super-exponential and unimodal decays have different phasor signatures. A generalization of the lever rule is obtained, and the existence of an outermost phasor curve corresponding to intermediate-like decays is demonstrated. A study of the behavior of more complex decay functions (sum of three exponentials, stretched and compressed exponentials, phosphorescence with reabsorption and triplet-triplet annihilation, fluorescence with quantum beats) allows concluding that a rich diversity of phasor plot patterns exists. In particular, super-exponential decays can present complex shapes, spiraling at high frequencies. The concept of virtual phasor is also introduced.

  2. A new inversion method for (T2, D) 2D NMR logging and fluid typing

    NASA Astrophysics Data System (ADS)

    Tan, Maojin; Zou, Youlong; Zhou, Cancan

    2013-02-01

    One-dimensional nuclear magnetic resonance (1D NMR) logging technology has some significant limitations in fluid typing. However, not only can two-dimensional nuclear magnetic resonance (2D NMR) provide some accurate porosity parameters, but it can also identify fluids more accurately than 1D NMR. In this paper, based on the relaxation mechanism of (T2, D) 2D NMR in a gradient magnetic field, a hybrid inversion method that combines least-squares-based QR decomposition (LSQR) and truncated singular value decomposition (TSVD) is examined in the 2D NMR inversion of various fluid models. The forward modeling and inversion tests are performed in detail with different acquisition parameters, such as magnetic field gradients (G) and echo spacing (TE) groups. The simulated results are discussed and described in detail, the influence of the above-mentioned observation parameters on the inversion accuracy is investigated and analyzed, and the observation parameters in multi-TE activation are optimized. Furthermore, the hybrid inversion can be applied to quantitatively determine the fluid saturation. To study the effects of noise level on the hybrid method and inversion results, the numerical simulation experiments are performed using different signal-to-noise-ratios (SNRs), and the effect of different SNRs on fluid typing using three fluid models are discussed and analyzed in detail.

  3. 9 CFR 108.3 - Preparation of plot plans.

    Code of Federal Regulations, 2010 CFR

    2010-01-01

    ... 9 Animals and Animal Products 1 2010-01-01 2010-01-01 false Preparation of plot plans. 108.3... LICENSED ESTABLISHMENTS § 108.3 Preparation of plot plans. Plot plans shall show all of the buildings on a... on the plot plan the use of immediate adjacent properties such as, residential area, pasture,...

  4. 9 CFR 108.3 - Preparation of plot plans.

    Code of Federal Regulations, 2012 CFR

    2012-01-01

    ... 9 Animals and Animal Products 1 2012-01-01 2012-01-01 false Preparation of plot plans. 108.3... LICENSED ESTABLISHMENTS § 108.3 Preparation of plot plans. Plot plans shall show all of the buildings on a... on the plot plan the use of immediate adjacent properties such as, residential area, pasture,...

  5. 9 CFR 108.3 - Preparation of plot plans.

    Code of Federal Regulations, 2014 CFR

    2014-01-01

    ... 9 Animals and Animal Products 1 2014-01-01 2014-01-01 false Preparation of plot plans. 108.3... LICENSED ESTABLISHMENTS § 108.3 Preparation of plot plans. Plot plans shall show all of the buildings on a... on the plot plan the use of immediate adjacent properties such as, residential area, pasture,...

  6. 9 CFR 108.3 - Preparation of plot plans.

    Code of Federal Regulations, 2011 CFR

    2011-01-01

    ... 9 Animals and Animal Products 1 2011-01-01 2011-01-01 false Preparation of plot plans. 108.3... LICENSED ESTABLISHMENTS § 108.3 Preparation of plot plans. Plot plans shall show all of the buildings on a... on the plot plan the use of immediate adjacent properties such as, residential area, pasture,...

  7. 9 CFR 108.3 - Preparation of plot plans.

    Code of Federal Regulations, 2013 CFR

    2013-01-01

    ... 9 Animals and Animal Products 1 2013-01-01 2013-01-01 false Preparation of plot plans. 108.3... LICENSED ESTABLISHMENTS § 108.3 Preparation of plot plans. Plot plans shall show all of the buildings on a... on the plot plan the use of immediate adjacent properties such as, residential area, pasture,...

  8. Brain networks supporting perceptual grouping and contour selection

    PubMed Central

    Volberg, Gregor; Greenlee, Mark W.

    2014-01-01

    The human visual system groups local elements into global objects seemingly without effort. Using a contour integration task and EEG source level analyses, we tested the hypothesis that perceptual grouping requires a top-down selection, rather than a passive pooling, of neural information that codes local elements in the visual image. The participants were presented visual displays with or without a hidden contour. Two tasks were performed: a central luminance-change detection task and a peripheral contour detection task. Only in the contour-detection task could we find differential brain activity between contour and non-contour conditions, within a distributed brain network including parietal, lateral occipital and primary visual areas. Contour processing was associated with an inflow of information from lateral occipital into primary visual regions, as revealed from the slope of phase differences between source level oscillations within these areas. The findings suggest that contour integration results from a selection of neural information from lower visual areas, and that this selection is driven by the lateral occipital cortex. PMID:24772096

  9. UNCERTAINTY ANALYSIS OF RUNOFF ESTIMATES FROM A RUNOFF CONTOUR MAP

    EPA Science Inventory

    The US EPA in cooperation with the USGS conducted an analysis to quantify the uncertainty associated with interpolatinq runoff to specific sites using a runoff contour map. e interpolated runoff to 93 gaged watersheds from a runoff contour map using 1) hand interpolation to the w...

  10. 32 CFR 707.5 - Underway replenishment contour lights.

    Code of Federal Regulations, 2011 CFR

    2011-07-01

    ... 32 National Defense 5 2011-07-01 2011-07-01 false Underway replenishment contour lights. 707.5... RULES WITH RESPECT TO ADDITIONAL STATION AND SIGNAL LIGHTS § 707.5 Underway replenishment contour lights... underway replenishment operations, either red or blue lights at delivery-ship-deck-edge extremities....

  11. 32 CFR 707.5 - Underway replenishment contour lights.

    Code of Federal Regulations, 2013 CFR

    2013-07-01

    ... 32 National Defense 5 2013-07-01 2013-07-01 false Underway replenishment contour lights. 707.5... RULES WITH RESPECT TO ADDITIONAL STATION AND SIGNAL LIGHTS § 707.5 Underway replenishment contour lights... underway replenishment operations, either red or blue lights at delivery-ship-deck-edge extremities....

  12. 32 CFR 707.5 - Underway replenishment contour lights.

    Code of Federal Regulations, 2012 CFR

    2012-07-01

    ... 32 National Defense 5 2012-07-01 2012-07-01 false Underway replenishment contour lights. 707.5... RULES WITH RESPECT TO ADDITIONAL STATION AND SIGNAL LIGHTS § 707.5 Underway replenishment contour lights... underway replenishment operations, either red or blue lights at delivery-ship-deck-edge extremities....

  13. 32 CFR 707.5 - Underway replenishment contour lights.

    Code of Federal Regulations, 2014 CFR

    2014-07-01

    ... 32 National Defense 5 2014-07-01 2014-07-01 false Underway replenishment contour lights. 707.5... RULES WITH RESPECT TO ADDITIONAL STATION AND SIGNAL LIGHTS § 707.5 Underway replenishment contour lights... underway replenishment operations, either red or blue lights at delivery-ship-deck-edge extremities....

  14. 32 CFR 707.5 - Underway replenishment contour lights.

    Code of Federal Regulations, 2010 CFR

    2010-07-01

    ... 32 National Defense 5 2010-07-01 2010-07-01 false Underway replenishment contour lights. 707.5... RULES WITH RESPECT TO ADDITIONAL STATION AND SIGNAL LIGHTS § 707.5 Underway replenishment contour lights... underway replenishment operations, either red or blue lights at delivery-ship-deck-edge extremities....

  15. Automatic 4D Reconstruction of Patient-Specific Cardiac Mesh with 1-to-1 Vertex Correspondence from Segmented Contours Lines

    PubMed Central

    Lim, Chi Wan; Su, Yi; Yeo, Si Yong; Ng, Gillian Maria; Nguyen, Vinh Tan; Zhong, Liang; Tan, Ru San; Poh, Kian Keong; Chai, Ping

    2014-01-01

    We propose an automatic algorithm for the reconstruction of patient-specific cardiac mesh models with 1-to-1 vertex correspondence. In this framework, a series of 3D meshes depicting the endocardial surface of the heart at each time step is constructed, based on a set of border delineated magnetic resonance imaging (MRI) data of the whole cardiac cycle. The key contribution in this work involves a novel reconstruction technique to generate a 4D (i.e., spatial–temporal) model of the heart with 1-to-1 vertex mapping throughout the time frames. The reconstructed 3D model from the first time step is used as a base template model and then deformed to fit the segmented contours from the subsequent time steps. A method to determine a tree-based connectivity relationship is proposed to ensure robust mapping during mesh deformation. The novel feature is the ability to handle intra- and inter-frame 2D topology changes of the contours, which manifests as a series of merging and splitting of contours when the images are viewed either in a spatial or temporal sequence. Our algorithm has been tested on five acquisitions of cardiac MRI and can successfully reconstruct the full 4D heart model in around 30 minutes per subject. The generated 4D heart model conforms very well with the input segmented contours and the mesh element shape is of reasonably good quality. The work is important in the support of downstream computational simulation activities. PMID:24743555

  16. Radiofrequency Spectroscopy and Thermodynamics of Fermi Gases in the 2D to Quasi-2D Dimensional Crossover

    NASA Astrophysics Data System (ADS)

    Cheng, Chingyun; Kangara, Jayampathi; Arakelyan, Ilya; Thomas, John

    2016-05-01

    We tune the dimensionality of a strongly interacting degenerate 6 Li Fermi gas from 2D to quasi-2D, by adjusting the radial confinement of pancake-shaped clouds to control the radial chemical potential. In the 2D regime with weak radial confinement, the measured pair binding energies are in agreement with 2D-BCS mean field theory, which predicts dimer pairing energies in the many-body regime. In the qausi-2D regime obtained with increased radial confinement, the measured pairing energy deviates significantly from 2D-BCS theory. In contrast to the pairing energy, the measured radii of the cloud profiles are not fit by 2D-BCS theory in either the 2D or quasi-2D regimes, but are fit in both regimes by a beyond mean field polaron-model of the free energy. Supported by DOE, ARO, NSF, and AFOSR.

  17. Competing coexisting phases in 2D water

    PubMed Central

    Zanotti, Jean-Marc; Judeinstein, Patrick; Dalla-Bernardina, Simona; Creff, Gaëlle; Brubach, Jean-Blaise; Roy, Pascale; Bonetti, Marco; Ollivier, Jacques; Sakellariou, Dimitrios; Bellissent-Funel, Marie-Claire

    2016-01-01

    The properties of bulk water come from a delicate balance of interactions on length scales encompassing several orders of magnitudes: i) the Hydrogen Bond (HBond) at the molecular scale and ii) the extension of this HBond network up to the macroscopic level. Here, we address the physics of water when the three dimensional extension of the HBond network is frustrated, so that the water molecules are forced to organize in only two dimensions. We account for the large scale fluctuating HBond network by an analytical mean-field percolation model. This approach provides a coherent interpretation of the different events experimentally (calorimetry, neutron, NMR, near and far infra-red spectroscopies) detected in interfacial water at 160, 220 and 250 K. Starting from an amorphous state of water at low temperature, these transitions are respectively interpreted as the onset of creation of transient low density patches of 4-HBonded molecules at 160 K, the percolation of these domains at 220 K and finally the total invasion of the surface by them at 250 K. The source of this surprising behaviour in 2D is the frustration of the natural bulk tetrahedral local geometry and the underlying very significant increase in entropy of the interfacial water molecules. PMID:27185018

  18. 2D Radiative Processes Near Cloud Edges

    NASA Technical Reports Server (NTRS)

    Varnai, T.

    2012-01-01

    Because of the importance and complexity of dynamical, microphysical, and radiative processes taking place near cloud edges, the transition zone between clouds and cloud free air has been the subject of intense research both in the ASR program and in the wider community. One challenge in this research is that the one-dimensional (1D) radiative models widely used in both remote sensing and dynamical simulations become less accurate near cloud edges: The large horizontal gradients in particle concentrations imply that accurate radiative calculations need to consider multi-dimensional radiative interactions among areas that have widely different optical properties. This study examines the way the importance of multidimensional shortwave radiative interactions changes as we approach cloud edges. For this, the study relies on radiative simulations performed for a multiyear dataset of clouds observed over the NSA, SGP, and TWP sites. This dataset is based on Microbase cloud profiles as well as wind measurements and ARM cloud classification products. The study analyzes the way the difference between 1D and 2D simulation results increases near cloud edges. It considers both monochromatic radiances and broadband radiative heating, and it also examines the influence of factors such as cloud type and height, and solar elevation. The results provide insights into the workings of radiative processes and may help better interpret radiance measurements and better estimate the radiative impacts of this critical region.

  19. Simulation of Yeast Cooperation in 2D.

    PubMed

    Wang, M; Huang, Y; Wu, Z

    2016-03-01

    Evolution of cooperation has been an active research area in evolutionary biology in decades. An important type of cooperation is developed from group selection, when individuals form spatial groups to prevent them from foreign invasions. In this paper, we study the evolution of cooperation in a mixed population of cooperating and cheating yeast strains in 2D with the interactions among the yeast cells restricted to their small neighborhoods. We conduct a computer simulation based on a game theoretic model and show that cooperation is increased when the interactions are spatially restricted, whether the game is of a prisoner's dilemma, snow drifting, or mutual benefit type. We study the evolution of homogeneous groups of cooperators or cheaters and describe the conditions for them to sustain or expand in an opponent population. We show that under certain spatial restrictions, cooperator groups are able to sustain and expand as group sizes become large, while cheater groups fail to expand and keep them from collapse. PMID:26988702

  20. Phase Engineering of 2D Tin Sulfides.

    PubMed

    Mutlu, Zafer; Wu, Ryan J; Wickramaratne, Darshana; Shahrezaei, Sina; Liu, Chueh; Temiz, Selcuk; Patalano, Andrew; Ozkan, Mihrimah; Lake, Roger K; Mkhoyan, K A; Ozkan, Cengiz S

    2016-06-01

    Tin sulfides can exist in a variety of phases and polytypes due to the different oxidation states of Sn. A subset of these phases and polytypes take the form of layered 2D structures that give rise to a wide host of electronic and optical properties. Hence, achieving control over the phase, polytype, and thickness of tin sulfides is necessary to utilize this wide range of properties exhibited by the compound. This study reports on phase-selective growth of both hexagonal tin (IV) sulfide SnS2 and orthorhombic tin (II) sulfide SnS crystals with diameters of over tens of microns on SiO2 substrates through atmospheric pressure vapor-phase method in a conventional horizontal quartz tube furnace with SnO2 and S powders as the source materials. Detailed characterization of each phase of tin sulfide crystals is performed using various microscopy and spectroscopy methods, and the results are corroborated by ab initio density functional theory calculations. PMID:27099950

  1. Ion Transport in 2-D Graphene Nanochannels

    NASA Astrophysics Data System (ADS)

    Xie, Quan; Foo, Elbert; Duan, Chuanhua

    2015-11-01

    Graphene membranes have recently attracted wide attention due to its great potential in water desalination and selective molecular sieving. Further developments of these membranes, including enhancing their mass transport rate and/or molecular selectivity, rely on the understanding of fundamental transport mechanisms through graphene membranes, which has not been studied experimentally before due to fabrication and measurement difficulties. Herein we report the fabrication of the basic constituent of graphene membranes, i.e. 2-D single graphene nanochannels (GNCs) and the study of ion transport in these channels. A modified bonding technique was developed to form GNCs with well-defined geometry and uniform channel height. Ion transport in such GNCs was studied using DC conductance measurement. Our preliminary results showed that the ion transport in GNCs is still governed by surface charge at low concentrations (10-6M to 10-4M). However, GNCs exhibits much higher ionic conductances than silica nanochannels with the same geometries in the surface-charge-governed regime. This conductance enhancement can be attributed to the pre-accumulation of charges on graphene surfaces. The work is supported by the Faculty Startup Fund (Boston University, USA).

  2. Parallel map analysis on 2-D grids

    SciTech Connect

    Berry, M.; Comiskey, J.; Minser, K.

    1993-12-31

    In landscape ecology, computer modeling is used to assess habitat fragmentation and its ecological iMPLications. Specifically, maps (2-D grids) of habitat clusters must be analyzed to determine number, sizes and geometry of clusters. Models prior to this study relied upon sequential Fortran-77 programs which limited the sizes of maps and densities of clusters which could be analyzed. In this paper, we present more efficient computer models which can exploit recursion or parallelism. Significant improvements over the original Fortran-77 programs have been achieved using both recursive and nonrecursive C implementations on a variety of workstations such as the Sun Sparc 2, IBM RS/6000-350, and HP 9000-750. Parallel implementations on a 4096-processor MasPar MP-1 and a 32-processor CM-5 are also studied. Preliminary experiments suggest that speed improvements for the parallel model on the MasPar MP-1 (written in MPL) and on the CM-5 (written in C using CMMD) can be as much as 39 and 34 times faster, respectively, than the most efficient sequential C program on a Sun Sparc 2 for a 512 map. An important goal in this research effort is to produce a scalable map analysis algorithm for the identification and characterization of clusters for relatively large maps on massively-parallel computers.

  3. 2D Turbulence with Complicated Boundaries

    NASA Astrophysics Data System (ADS)

    Roullet, G.; McWilliams, J. C.

    2014-12-01

    We examine the consequences of lateral viscous boundary layers on the 2D turbulence that arises in domains with complicated boundaries (headlands, bays etc). The study is carried out numerically with LES. The numerics are carefully designed to ensure all global conservation laws, proper boundary conditions and a minimal range of dissipation scales. The turbulence dramatically differs from the classical bi-periodic case. Boundary layer separations lead to creation of many small vortices and act as a continuing energy source exciting the inverse cascade of energy throughout the domain. The detachments are very intermittent in time. In free decay, the final state depends on the effective numerical resolution: laminar with a single dominant vortex for low Re and turbulent with many vortices for large enough Re. After very long time, the turbulent end-state exhibits a striking tendency for the emergence of shielded vortices which then interact almost elastically. In the forced case, the boundary layers allow the turbulence to reach a statistical steady state without any artificial hypo-viscosity or other large-scale dissipation. Implications are discussed for the oceanic mesoscale and submesoscale turbulence.

  4. Competing coexisting phases in 2D water

    NASA Astrophysics Data System (ADS)

    Zanotti, Jean-Marc; Judeinstein, Patrick; Dalla-Bernardina, Simona; Creff, Gaëlle; Brubach, Jean-Blaise; Roy, Pascale; Bonetti, Marco; Ollivier, Jacques; Sakellariou, Dimitrios; Bellissent-Funel, Marie-Claire

    2016-05-01

    The properties of bulk water come from a delicate balance of interactions on length scales encompassing several orders of magnitudes: i) the Hydrogen Bond (HBond) at the molecular scale and ii) the extension of this HBond network up to the macroscopic level. Here, we address the physics of water when the three dimensional extension of the HBond network is frustrated, so that the water molecules are forced to organize in only two dimensions. We account for the large scale fluctuating HBond network by an analytical mean-field percolation model. This approach provides a coherent interpretation of the different events experimentally (calorimetry, neutron, NMR, near and far infra-red spectroscopies) detected in interfacial water at 160, 220 and 250 K. Starting from an amorphous state of water at low temperature, these transitions are respectively interpreted as the onset of creation of transient low density patches of 4-HBonded molecules at 160 K, the percolation of these domains at 220 K and finally the total invasion of the surface by them at 250 K. The source of this surprising behaviour in 2D is the frustration of the natural bulk tetrahedral local geometry and the underlying very significant increase in entropy of the interfacial water molecules.

  5. Competing coexisting phases in 2D water.

    PubMed

    Zanotti, Jean-Marc; Judeinstein, Patrick; Dalla-Bernardina, Simona; Creff, Gaëlle; Brubach, Jean-Blaise; Roy, Pascale; Bonetti, Marco; Ollivier, Jacques; Sakellariou, Dimitrios; Bellissent-Funel, Marie-Claire

    2016-01-01

    The properties of bulk water come from a delicate balance of interactions on length scales encompassing several orders of magnitudes: i) the Hydrogen Bond (HBond) at the molecular scale and ii) the extension of this HBond network up to the macroscopic level. Here, we address the physics of water when the three dimensional extension of the HBond network is frustrated, so that the water molecules are forced to organize in only two dimensions. We account for the large scale fluctuating HBond network by an analytical mean-field percolation model. This approach provides a coherent interpretation of the different events experimentally (calorimetry, neutron, NMR, near and far infra-red spectroscopies) detected in interfacial water at 160, 220 and 250 K. Starting from an amorphous state of water at low temperature, these transitions are respectively interpreted as the onset of creation of transient low density patches of 4-HBonded molecules at 160 K, the percolation of these domains at 220 K and finally the total invasion of the surface by them at 250 K. The source of this surprising behaviour in 2D is the frustration of the natural bulk tetrahedral local geometry and the underlying very significant increase in entropy of the interfacial water molecules. PMID:27185018

  6. 2-D wavelet with position controlled resolution

    NASA Astrophysics Data System (ADS)

    Walczak, Andrzej; Puzio, Leszek

    2005-09-01

    Wavelet transformation localizes all irregularities in the scene. It is most effective in the case when intensities in the scene have no sharp details. It is the case often present in a medical imaging. To identify the shape one has to extract it from the scene as typical irregularity. When the scene does not contain sharp changes then common differential filters are not efficient tool for a shape extraction. The new 2-D wavelet for such task has been proposed. Described wavelet transform is axially symmetric and has varied scale in dependence on the distance from the centre of the wavelet symmetry. The analytical form of the wavelet has been presented as well as its application for details extraction in the scene. Most important feature of the wavelet transform is that it gives a multi-scale transformation, and if zoom is on the wavelet selectivity varies proportionally to the zoom step. As a result, the extracted shape does not change during zoom operation. What is more the wavelet selectivity can be fit to the local intensity gradient properly to obtain best extraction of the irregularities.

  7. Bringing SEM-contour based OPC to production

    NASA Astrophysics Data System (ADS)

    Weisbuch, François; Koh, Kar Kit; Jantzen, Kenneth

    2014-03-01

    Calibrating an accurate OPC model usually requires a lot of one-dimensional CD-SEM measurements. A promising alternative is to use a SEM image contour approach but many challenges remain to implement this technique for production. In this work a specific flow is presented to get good and reliable contours well matched with traditional CDSEM measurements. Furthermore this work investigates the importance of site selection (number, type, image space coverage) for a successful contour-based OPC model. Finally the comparison of conventional and contour based models takes into account the calibration and verification performances of both models with a possible cross verification between model data sets. Specific advantages of contour based model are also discussed.

  8. Children's perception of certain musical properties: scale and contour.

    PubMed

    Pick, A D; Palmer, C F; Hennessy, B L; Unze, M G; Jones, R K; Richardson, R M

    1988-02-01

    Children's perception of scale and contour in melodies was investigated in five studies. Experimental tasks included judging transposed renditions of melodies (Studies 1 and 3), discriminating between transposed renditions of a melody (Study 2), judging contour-preserving transformations of melodies (Study 4), and judging similarity to a familiar target melody of transformations preserving rhythm or rhythm and contour (Study 5). The first and second studies showed that young children detect key transposition changes even in familiar melodies and they perceive similarity over key transpositions even in unfamiliar melodies. Young children also are sensitive to melodic contour over transformations that preserve it (Study 5), yet they distinguish spontaneously between melodies with the same contour and different intervals (Study 4). The key distance effect reported in the literature did not occur in the tasks of this investigation (Studies 1 and 3), and it may be apparent only for melodies shorter or more impoverished than those used here. PMID:3343585

  9. Robust contour tracking in ultrasound tongue image sequences.

    PubMed

    Xu, Kele; Yang, Yin; Stone, Maureen; Jaumard-Hakoun, Aurore; Leboullenger, Clémence; Dreyfus, Gérard; Roussel, Pierre; Denby, Bruce

    2016-01-01

    A new contour-tracking algorithm is presented for ultrasound tongue image sequences, which can follow the motion of tongue contours over long durations with good robustness. To cope with missing segments caused by noise, or by the tongue midsagittal surface being parallel to the direction of ultrasound wave propagation, active contours with a contour-similarity constraint are introduced, which can be used to provide 'prior' shape information. Also, in order to address accumulation of tracking errors over long sequences, we present an automatic re-initialization technique, based on the complex wavelet image similarity index. Experiments on synthetic data and on real 60 frame per second (fps) data from different subjects demonstrate that the proposed method gives good contour tracking for ultrasound image sequences even over durations of minutes, which can be useful in applications such as speech recognition where very long sequences must be analyzed in their entirety. PMID:26786063

  10. Some distinguishing characteristics of contour and texture phenomena in images

    NASA Technical Reports Server (NTRS)

    Jobson, Daniel J.

    1992-01-01

    The development of generalized contour/texture discrimination techniques is a central element necessary for machine vision recognition and interpretation of arbitrary images. Here, the visual perception of texture, selected studies of texture analysis in machine vision, and diverse small samples of contour and texture are all used to provide insights into the fundamental characteristics of contour and texture. From these, an experimental discrimination scheme is developed and tested on a battery of natural images. The visual perception of texture defined fine texture as a subclass which is interpreted as shading and is distinct from coarse figural similarity textures. Also, perception defined the smallest scale for contour/texture discrimination as eight to nine visual acuity units. Three contour/texture discrimination parameters were found to be moderately successful for this scale discrimination: (1) lightness change in a blurred version of the image, (2) change in lightness change in the original image, and (3) percent change in edge counts relative to local maximum.

  11. Enhancing gas chromatography-time of flight mass spectrometry data analysis using two-dimensional mass channel cluster plots.

    PubMed

    Fitz, Brian D; Reaser, Brooke C; Pinkerton, David K; Hoggard, Jamin C; Skogerboe, Kristen J; Synovec, Robert E

    2014-04-15

    A novel data reduction and representation method for gas chromatography time-of-flight mass spectrometry (GC-TOFMS) is presented that significantly facilitates separation visualization and analyte peak deconvolution. The method utilizes the rapid mass spectral data collection rate (100 scans/s or greater) of current generation TOFMS detectors. Chromatographic peak maxima (serving as the retention time, tR) above a user specified signal threshold are located, and the chromatographic peak width, W, are determined on a per mass channel (m/z) basis for each analyte peak. The peak W (per m/z) is then plotted against its respective tR (with 10 ms precision) in a two-dimensional (2D) format, producing a cluster of points (i.e., one point per peak W versus tR in the 2D plot). Analysis of GC-TOFMS data by this method produces what is referred to as a two-dimensional mass channel cluster plot (2D m/z cluster plot). We observed that adjacent eluting (even coeluting) peaks in a temperature programmed separation can have their peak W vary as much as ∼10-15%. Hence, the peak W provides useful chemical selectivity when viewed in the 2D m/z cluster plot format. Pairs of overlapped analyte peaks with one-dimensional GC resolution as low as Rs ≈ 0.03 can be visually identified as fully resolved in a 2D m/z cluster plot and readily deconvoluted using chemometrics (i.e., demonstrated using classical least-squares analysis). Using the 2D m/z cluster plot method, the effective peak capacity of one-dimensional GC separations is magnified nearly 40-fold in one-dimensional GC, and potentially ∼100-fold in the context of comparing it to a two-dimensional separation. The method was studied using a 73 component test mixture separated on a 30 m × 250 μm i.d. RTX-5 column with a LECO Pegasus III TOFMS. PMID:24661185

  12. 2D photonic crystals on the Archimedean lattices (tribute to Johannes Kepler (1571 1630))

    NASA Astrophysics Data System (ADS)

    Gajić, R.; class="cross-out">D. Jovanović,

    2008-03-01

    Results of our research on 2D Archemedean lattice photonic crystals are presented. This involves the calculations of the band structures, band-gap maps, equifrequency contours and FDTD simulations of electromagnetic propagation through the structures as well as an experimental verification of negative refraction at microwaves. The band-gap dependence on dielectric contrast is established both for dielectric rods in air and air-holes in dielectric materials. A special emphasis is placed on possibilities of negative refraction and left-handedness in these structures. Together with the familiar Archimedean lattices like square, triangular, honeycomb and Kagome' ones, we consider also, the less known, (3 2, 4, 3, 4) (ladybug) and (3, 4, 6, 4) (honeycomb-ring) structures.

  13. Program Aids Creation Of X-Y Plots

    NASA Technical Reports Server (NTRS)

    Jeletic, James F.

    1993-01-01

    VEGAS computer program enables application programmers to create X-Y plots in various modes through high-level subroutine calls. Modes consist of passive, autoupdate, and interactive modes. In passive mode, VEGAS takes input data, produces plot, and returns control to application program. In autoupdate mode, forms plots and automatically updates them as more information received. In interactive mode, displays plot and provides popup menus for user to alter appearance of plot or to modify data. Written in FORTRAN 77.

  14. Framework of a Contour Based Depth Map Coding Method

    NASA Astrophysics Data System (ADS)

    Wang, Minghui; He, Xun; Jin, Xin; Goto, Satoshi

    Stereo-view and multi-view video formats are heavily investigated topics given their vast application potential. Depth Image Based Rendering (DIBR) system has been developed to improve Multiview Video Coding (MVC). Depth image is introduced to synthesize virtual views on the decoder side in this system. Depth image is a piecewise image, which is filled with sharp contours and smooth interior. Contours in a depth image show more importance than interior in view synthesis process. In order to improve the quality of the synthesized views and reduce the bitrate of depth image, a contour based coding strategy is proposed. First, depth image is divided into layers by different depth value intervals. Then regions, which are defined as the basic coding unit in this work, are segmented from each layer. The region is further divided into the contour and the interior. Two different procedures are employed to code contours and interiors respectively. A vector-based strategy is applied to code the contour lines. Straight lines in contours cost few of bits since they are regarded as vectors. Pixels, which are out of straight lines, are coded one by one. Depth values in the interior of a region are modeled by a linear or nonlinear formula. Coefficients in the formula are retrieved by regression. This process is called interior painting. Unlike conventional block based coding method, the residue between original frame and reconstructed frame (by contour rebuilt and interior painting) is not sent to decoder. In this proposal, contour is coded in a lossless way whereas interior is coded in a lossy way. Experimental results show that the proposed Contour Based Depth map Coding (CBDC) achieves a better performance than JMVC (reference software of MVC) in the high quality scenarios.

  15. 2-D Animation's Not Just for Mickey Mouse.

    ERIC Educational Resources Information Center

    Weinman, Lynda

    1995-01-01

    Discusses characteristics of two-dimensional (2-D) animation; highlights include character animation, painting issues, and motion graphics. Sidebars present Silicon Graphics animations tools and 2-D animation programs for the desktop computer. (DGM)

  16. Electron Momentum Distribution Mapping of Trans-Stilbene Projected to [101] by Positron 2D-ACAR

    NASA Astrophysics Data System (ADS)

    Selvakumar, S.; Sivaji, K.; Smith, S. V.

    Electron momentum distribution (EMD) on trans-stilbene single crystal projected along [101] direction has been studied by using positron two dimensional -angular correlation of annihilation radiation (2D-ACAR). The projected EMD is explained with respect to the molecular arrangement in the plane. The EMD features reflected the delocalized electronic states in [101] direction. The results of EMD mapping did not show a characteristic ellipsoidal distribution at lower momentum region (LMR) as observed in trans-stilbene projected to [010] direction at room temperature. The LMR region exhibits a hexagonal contour projected to [101] direction.

  17. MAZE96. Generates 2D Input for DYNA NIKE & TOPAZ

    SciTech Connect

    Sanford, L.; Hallquist, J.O.

    1992-02-24

    MAZE is an interactive program that serves as an input and two-dimensional mesh generator for DYNA2D, NIKE2D, TOPAZ2D, and CHEMICAL TOPAZ2D. MAZE also generates a basic template for ISLAND input. MAZE has been applied to the generation of input data to study the response of two-dimensional solids and structures undergoing finite deformations under a wide variety of large deformation transient dynamic and static problems and heat transfer analyses.

  18. On 2D graphical representation of DNA sequence of nondegeneracy

    NASA Astrophysics Data System (ADS)

    Zhang, Yusen; Liao, Bo; Ding, Kequan

    2005-08-01

    Some two-dimensional (2D) graphical representations of DNA sequences have been given by Gates, Nandy, Leong and Mogenthaler, Randić, and Liao et al., which give visual characterizations of DNA sequences. In this Letter, we introduce a nondegeneracy 2D graphical representation of DNA sequence, which is different from Randić's novel 2D representation and Liao's 2D representation. We also present the nondegeneracy forms corresponding to the representations of Gates, Nandy, Leong and Mogenthaler.

  19. Generates 2D Input for DYNA NIKE & TOPAZ

    1996-07-15

    MAZE is an interactive program that serves as an input and two-dimensional mesh generator for DYNA2D, NIKE2D, TOPAZ2D, and CHEMICAL TOPAZ2D. MAZE also generates a basic template for ISLAND input. MAZE has been applied to the generation of input data to study the response of two-dimensional solids and structures undergoing finite deformations under a wide variety of large deformation transient dynamic and static problems and heat transfer analyses.

  20. A numerical tracing experiment of water erosion at the plot scale

    NASA Astrophysics Data System (ADS)

    Nord, G.; Esteves, M.

    2009-04-01

    A numerical experiment of water erosion was set up on a plot of 100m2 (20m long by 5m wide) using PSEM_2D (Plot Soil Erosion Model). Various environmental factors were tested: six topographies combining different slopes and microtopography, four extreme rainfall events representative of the Temperate and the Mediterranean climates, four different textured soils, and two conditions of upstream injected discharge. 192 simulations were run. The results enabled to study the processes that control erosion and sediment yield at the plot scale. A notable contribution of this study was the possibility to trace numerically eroded sediment. Sediment originated from five successive zones of 20m2 (4m long by 5m wide) was labelled in a different way and traced to assess re-deposition within the plot and exportation at the outlet of the plot. Over the 100m2 plot, the contribution of rainfall erosion processes was dominant for most of the simulations without upstream injected discharge. However, in certain conditions of runoff discharge, slope, and critical shear stress, flow erosion was activated in the downer part of the plot, becoming the major source of sediment and producing substantial sediment yield. For the simulations with upstream injected discharge, flow erosion processes were generally the primary source of sediment over the whole plot and sediment yield was very high. Sediment that left the 100m2 plot originated mostly from the downer part of the slope. In the case of low slope and break in slope, sediment came exclusively from the toeslope pointing out the efficiency of the break in slope to reduce significantly sediment yield. In the case of topographies with microrelief, an increase in slope caused an increase in both sediment yield and maximum travel distance of sediment. In the case of fine sediment, plane surfaces, and upstream injected discharge, the contribution of sediment from upper parts of the plot and the maximum travel distance of sediment were enhanced

  1. 2d PDE Linear Symmetric Matrix Solver

    1983-10-01

    ICCG2 (Incomplete Cholesky factorized Conjugate Gradient algorithm for 2d symmetric problems) was developed to solve a linear symmetric matrix system arising from a 9-point discretization of two-dimensional elliptic and parabolic partial differential equations found in plasma physics applications, such as resistive MHD, spatial diffusive transport, and phase space transport (Fokker-Planck equation) problems. These problems share the common feature of being stiff and requiring implicit solution techniques. When these parabolic or elliptic PDE''s are discretized withmore » finite-difference or finite-element methods,the resulting matrix system is frequently of block-tridiagonal form. To use ICCG2, the discretization of the two-dimensional partial differential equation and its boundary conditions must result in a block-tridiagonal supermatrix composed of elementary tridiagonal matrices. The incomplete Cholesky conjugate gradient algorithm is used to solve the linear symmetric matrix equation. Loops are arranged to vectorize on the Cray1 with the CFT compiler, wherever possible. Recursive loops, which cannot be vectorized, are written for optimum scalar speed. For matrices lacking symmetry, ILUCG2 should be used. Similar methods in three dimensions are available in ICCG3 and ILUCG3. A general source containing extensions and macros, which must be processed by a pre-compiler to obtain the standard FORTRAN source, is provided along with the standard FORTRAN source because it is believed to be more readable. The pre-compiler is not included, but pre-compilation may be performed by a text editor as described in the UCRL-88746 Preprint.« less

  2. 2d PDE Linear Asymmetric Matrix Solver

    1983-10-01

    ILUCG2 (Incomplete LU factorized Conjugate Gradient algorithm for 2d problems) was developed to solve a linear asymmetric matrix system arising from a 9-point discretization of two-dimensional elliptic and parabolic partial differential equations found in plasma physics applications, such as plasma diffusion, equilibria, and phase space transport (Fokker-Planck equation) problems. These equations share the common feature of being stiff and requiring implicit solution techniques. When these parabolic or elliptic PDE''s are discretized with finite-difference or finite-elementmore » methods, the resulting matrix system is frequently of block-tridiagonal form. To use ILUCG2, the discretization of the two-dimensional partial differential equation and its boundary conditions must result in a block-tridiagonal supermatrix composed of elementary tridiagonal matrices. A generalization of the incomplete Cholesky conjugate gradient algorithm is used to solve the matrix equation. Loops are arranged to vectorize on the Cray1 with the CFT compiler, wherever possible. Recursive loops, which cannot be vectorized, are written for optimum scalar speed. For problems having a symmetric matrix ICCG2 should be used since it runs up to four times faster and uses approximately 30% less storage. Similar methods in three dimensions are available in ICCG3 and ILUCG3. A general source, containing extensions and macros, which must be processed by a pre-compiler to obtain the standard FORTRAN source, is provided along with the standard FORTRAN source because it is believed to be more readable. The pre-compiler is not included, but pre-compilation may be performed by a text editor as described in the UCRL-88746 Preprint.« less

  3. Ultrasonic 2D matrix PVDF transducer

    NASA Astrophysics Data System (ADS)

    Ptchelintsev, A.; Maev, R. Gr.

    2000-05-01

    During the past decade a substantial amount of work has been done in the area of ultrasonic imaging technology using 2D arrays. The main problems arising for the two-dimensional matrix transducers at megahertz frequencies are small size and huge count of the elements, high electrical impedance, low sensitivity, bad SNR and slower data acquisition rate. The major technological difficulty remains the high density of the interconnect. To solve these problems numerous approaches have been suggested. In the present work, a 24×24 elements (24 transmit+24 receive) matrix and a switching board were developed. The transducer consists of two 52 μm PVDF layers each representing a linear array of 24 elements placed one on the top of the other. Electrodes in these two layers are perpendicular and form the grid of 0.5×0.5 mm pitch. The layers are bonded together with the ground electrode being monolithic and located between the layers. The matrix is backed from the rear surface with an epoxy composition. During the emission, a linear element from the emitting layer generates a longitudinal wave pulse propagating inside the test object. Reflected pulses are picked-up by the receiving layer. During one transmit-receive cycle one transmit element and one receive element are selected by corresponding multiplexers. These crossed elements emulate a small element formed by their intersection. The present design presents the following advantages: minimizes number of active channels and density of the interconnect; reduces the electrical impedance of the element improving electrical matching; enables the transmit-receive mode; due to the efficient backing provides bandwidth and good time resolution; and, significantly reduces the electronics complexity. The matrix can not be used for the beam steering and focusing. Owing to this impossibility of focusing, the penetration depth is limited as well by the diffraction phenomena.

  4. A PC-interactive stereonet plotting program

    NASA Astrophysics Data System (ADS)

    Pilant, Walter L.

    The computer program here described allows the structural geologist to rotate and revolve structural data interactively (strike dip: trend plunge). These actions can remove the effects of dip and plunge. Once a final screen plot is obtained, it may be printed on an associated graphics printer. This program requires an IBM PC/XT AT or compatible equipped with the color graphics (CGA) card. It also works satisfactorily on compatible PCs such as the COMPAQ or AT&T 6300 (which use a combination mono CGA screen). The addition of a math coprocessor (8087 or 80287) greatly speeds up the response time but is not required.

  5. Time delay plots of unflavoured baryons

    NASA Astrophysics Data System (ADS)

    Kelkar, N. G.; Nowakowski, M.; Khemchandani, K. P.; Jain, S. R.

    2004-01-01

    We explore the usefulness of the existing relations between the S-matrix and time delay in characterizing baryon resonances in pion-nucleon scattering. We draw attention to the fact that the existence of a positive maximum in time delay is a necessary criterion for the existence of a resonance and should be used as a constraint in conventional analyses which locate resonances from poles of the S-matrix and Argand diagrams. The usefulness of the time delay plots of resonances is demonstrated through a detailed analysis of the time delay in several partial waves of πN elastic scattering.

  6. Presentation of meta-analysis plots.

    PubMed

    Wald, N J; Bestwick, J P

    2015-03-01

    Meta-analysis (forest) plots are widely used to show the results from multiple individual randomized trials or observational studies that address the same question, including the assessment of screening markers. They show the between study spread of results and provide a summary estimate of the results from all the studies combined. We here illustrate the advantage of ordering study results by the magnitude of the effect and including a vertical shaded band encompassing the summary 95% confidence interval of the summary estimate to emphasize the uncertainty of the estimate in a way that is more prominent than only displaying a "diamond" around its value. PMID:25753762

  7. A Planar Quantum Transistor Based on 2D-2D Tunneling in Double Quantum Well Heterostructures

    SciTech Connect

    Baca, W.E.; Blount, M.A.; Hafich, M.J.; Lyo, S.K.; Moon, J.S.; Reno, J.L.; Simmons, J.A.; Wendt, J.R.

    1998-12-14

    We report on our work on the double electron layer tunneling transistor (DELTT), based on the gate-control of two-dimensional -- two-dimensional (2D-2D) tunneling in a double quantum well heterostructure. While previous quantum transistors have typically required tiny laterally-defined features, by contrast the DELTT is entirely planar and can be reliably fabricated in large numbers. We use a novel epoxy-bond-and-stop-etch (EBASE) flip-chip process, whereby submicron gating on opposite sides of semiconductor epitaxial layers as thin as 0.24 microns can be achieved. Because both electron layers in the DELTT are 2D, the resonant tunneling features are unusually sharp, and can be easily modulated with one or more surface gates. We demonstrate DELTTs with peak-to-valley ratios in the source-drain I-V curve of order 20:1 below 1 K. Both the height and position of the resonant current peak can be controlled by gate voltage over a wide range. DELTTs with larger subband energy offsets ({approximately} 21 meV) exhibit characteristics that are nearly as good at 77 K, in good agreement with our theoretical calculations. Using these devices, we also demonstrate bistable memories operating at 77 K. Finally, we briefly discuss the prospects for room temperature operation, increases in gain, and high-speed.

  8. Discourse-level contours in Nehiyawewin

    NASA Astrophysics Data System (ADS)

    Muehlbauer, Jeff; Cook, Clare

    2005-04-01

    This study describes declination and discourse-sized intonation contours in Nehiyawewin, an Algonquian language whose pitch and intonation systems have not been previously studied. The study draws on 270 min of recordings of two female Nehiyaw elders telling their life stories to another Nehiyawewin native speaker. Data is analyzed by using Praat's default algorithm to generate f0 curves for each breath group. Preliminary results indicate: (1) When breath-group internal pitch peaks are considered, an obvious downward trend of f0 occurred in fewer than half the breath groups analyzed (about 40% or 37/90). This raises questions about the role of classical declination in natural discourse [Umeda, Journal of Phonetics 10 (1982)]. (2) When we abstract away from declination within a breath group by computing mean f0 and mean pitch peak for each breath group and tracking trends for these means, larger patterns seem to emerge; breath groups can be grouped into larger units based on raising and lowering trends. These units have a mean peak range of 150 Hz with a 30 Hz change from one breath group to the next and correspond to a domain of around five clauses (about 3-4 breath groups, about 45 syllables).

  9. Directed random polymers via nested contour integrals

    NASA Astrophysics Data System (ADS)

    Borodin, Alexei; Bufetov, Alexey; Corwin, Ivan

    2016-05-01

    We study the partition function of two versions of the continuum directed polymer in 1 + 1 dimension. In the full-space version, the polymer starts at the origin and is free to move transversally in R, and in the half-space version, the polymer starts at the origin but is reflected at the origin and stays in R-. The partition functions solve the stochastic heat equation in full-space or half-space with mixed boundary condition at the origin; or equivalently the free energy satisfies the Kardar-Parisi-Zhang equation. We derive exact formulas for the Laplace transforms of the partition functions. In the full-space this is expressed as a Fredholm determinant while in the half-space this is expressed as a Fredholm Pfaffian. Taking long-time asymptotics we show that the limiting free energy fluctuations scale with exponent 1 / 3 and are given by the GUE and GSE Tracy-Widom distributions. These formulas come from summing divergent moment generating functions, hence are not mathematically justified. The primary purpose of this work is to present a mathematical perspective on the polymer replica method which is used to derive these results. In contrast to other replica method work, we do not appeal directly to the Bethe ansatz for the Lieb-Liniger model but rather utilize nested contour integral formulas for moments as well as their residue expansions.

  10. ANOPP/VMS HSCT ground contour system

    NASA Technical Reports Server (NTRS)

    Rawls, John, Jr.; Glaab, Lou

    1992-01-01

    This viewgraph shows the integration of the Visual Motion Simulator with ANOPP. ANOPP is an acronym for the Aircraft NOise Prediction Program. It is a computer code consisting of dedicated noise prediction modules for jet, propeller, and rotor powered aircraft along with flight support and noise propagation modules, all executed under the control of an executive system. The Visual Motion Simulator (VMS) is a ground based motion simulator with six degrees of freedom. The transport-type cockpit is equipped with conventional flight and engine-thrust controls and with flight instrument displays. Control forces on the wheel, column, and rudder pedals are provided by a hydraulic system coupled with an analog computer. The simulator provides variable-feel characteristics of stiffness, damping, coulomb friction, breakout forces, and inertia. The VMS provides a wide range of realistic flight trajectories necessary for computing accurate ground contours. The NASA VMS will be discussed in detail later in this presentation. An equally important part of the system for both ANOPP and VMS is the engine performance. This will also be discussed in the presentation.

  11. Evaluation of Dosimetric Consequences of Seroma Contour Variability in Accelerated Partial Breast Irradiation Using a Constructed Representative Seroma Contour

    SciTech Connect

    Kosztyla, Robert; Olson, Robert; Carolan, Hannah; Balkwill, Susan; Moiseenko, Vitali; Kwan, Winkle

    2012-10-01

    Purpose: Contouring variability of the seroma can have important implications in the planning and delivery of accelerated partial breast irradiation (APBI). This study aimed to quantify the dosimetric impact of these interobserver and intraobserver contouring variations by construction of a representative seroma contour (RSC). Methods and Materials: Twenty-one patients with a seroma suitable for APBI underwent four computed tomography (CT) scans: one planning CT and three additional CTs on the first, third, and fifth days of treatment. Three radiation oncologists contoured the seroma on each CT scan. For 3 patients, oncologists repeated contouring twice to assess intraobserver variations. Seroma contour variability was quantified by construction of an RSC. In addition, the percent volume overlap (PVO) was calculated. Root-mean-square (RMS) differences in seroma volume, size, and center of mass position compared to those of the RSC were calculated. Treatment fields from the original plan were applied to the repeated CTs by using the same isocenter shifts as the original plan. The dosimetric impact of the contour variations was assessed using V{sub 95} (volume receiving at least 95% of the prescribed dose) and equivalent uniform dose (EUD). Results: Interobserver RMS volume differences were, on average, 5.6 times larger than intraobserver differences. The median interobserver RMS seroma volume difference was 1.48 cm{sup 3}. The median PVO was 51.6%. V{sub 95} and EUD of the seroma contours were similar for all patients. The median RMS differences of the seroma V{sub 95} and EUD were 0.01% (range, 0%-3.99%) and 0.05 Gy (range, 0-0.98 Gy). Conclusions: Construction of the RSC showed that interobserver variations were most responsible for contour variations of the seroma. Current planning margins provided adequate dose coverage of the seroma despite these contour variations.

  12. Computation of neutron fluxes in clusters of fuel pins arranged in hexagonal assemblies (2D and 3D)

    SciTech Connect

    Prabha, H.; Marleau, G.

    2012-07-01

    For computations of fluxes, we have used Carvik's method of collision probabilities. This method requires tracking algorithms. An algorithm to compute tracks (in 2D and 3D) has been developed for seven hexagonal geometries with cluster of fuel pins. This has been implemented in the NXT module of the code DRAGON. The flux distribution in cluster of pins has been computed by using this code. For testing the results, they are compared when possible with the EXCELT module of the code DRAGON. Tracks are plotted in the NXT module by using MATLAB, these plots are also presented here. Results are presented with increasing number of lines to show the convergence of these results. We have numerically computed volumes, surface areas and the percentage errors in these computations. These results show that 2D results converge faster than 3D results. The accuracy on the computation of fluxes up to second decimal is achieved with fewer lines. (authors)

  13. Manifest: A computer program for 2-D flow modeling in Stirling machines

    NASA Technical Reports Server (NTRS)

    Gedeon, David

    1989-01-01

    A computer program named Manifest is discussed. Manifest is a program one might want to use to model the fluid dynamics in the manifolds commonly found between the heat exchangers and regenerators of Stirling machines; but not just in the manifolds - in the regenerators as well. And in all sorts of other places too, such as: in heaters or coolers, or perhaps even in cylinder spaces. There are probably nonStirling uses for Manifest also. In broad strokes, Manifest will: (1) model oscillating internal compressible laminar fluid flow in a wide range of two-dimensional regions, either filled with porous materials or empty; (2) present a graphics-based user-friendly interface, allowing easy selection and modification of region shape and boundary condition specification; (3) run on a personal computer, or optionally (in the case of its number-crunching module) on a supercomputer; and (4) allow interactive examination of the solution output so the user can view vector plots of flow velocity, contour plots of pressure and temperature at various locations and tabulate energy-related integrals of interest.

  14. Orientation-Enhanced Parallel Coordinate Plots.

    PubMed

    Raidou, Renata Georgia; Eisemann, Martin; Breeuwer, Marcel; Eisemann, Elmar; Vilanova, Anna

    2016-01-01

    Parallel Coordinate Plots (PCPs) is one of the most powerful techniques for the visualization of multivariate data. However, for large datasets, the representation suffers from clutter due to overplotting. In this case, discerning the underlying data information and selecting specific interesting patterns can become difficult. We propose a new and simple technique to improve the display of PCPs by emphasizing the underlying data structure. Our Orientation-enhanced Parallel Coordinate Plots (OPCPs) improve pattern and outlier discernibility by visually enhancing parts of each PCP polyline with respect to its slope. This enhancement also allows us to introduce a novel and efficient selection method, the Orientation-enhanced Brushing (O-Brushing). Our solution is particularly useful when multiple patterns are present or when the view on certain patterns is obstructed by noise. We present the results of our approach with several synthetic and real-world datasets. Finally, we conducted a user evaluation, which verifies the advantages of the OPCPs in terms of discernibility of information in complex data. It also confirms that O-Brushing eases the selection of data patterns in PCPs and reduces the amount of necessary user interactions compared to state-of-the-art brushing techniques. PMID:26529720

  15. Holey buckets! Monitoring plot-scale runoff

    NASA Astrophysics Data System (ADS)

    Rupp, D. E.; Stewart, R. D.; Abou Najm, M. R.; Selker, J. S.; Selker, F.; Van De Giesen, N.

    2011-12-01

    Measurement of plot-scale surface runoff is commonly achieved by diverting flow through a flume or tipping bucket system, or into a storage tank, such as bucket. The principle advantages of the "bucket method" are relative simplicity and low cost. The principle drawback is that the bucket requires frequent emptying during heavy runoff, unless the bucket volume is very large. As a solution to the problem of emptying the bucket while still retaining the properties of simplicity and economy, we used a holey bucket. Our "bucket" is vertical 4"-diameter ABS pipe, sealed at the bottom, and with holes along the side of the pipe. A screen in the pipe catches debris that could block the holes. The holes' diameters and locations were chosen to capture both low (<1 L min-1) and high (>100 L min-1) flows. Runoff is diverted into the top of the pipe. The runoff rate is determined from the water level and the rate of change in water level: the water level gives the flow rate out of the submerged holes (using Torricelli's Law) and the change in water level gives the rate of change in storage in the pipe. The runoff is calculated as the sum of the hole discharge and the rate of change in storage. A calibration parameter is applied to account for departures from assumptions of the theory. The design is currently being utilized to monitor runoff from experimental plots on a rural hillslope in Chile.

  16. Rainfall Manipulation Plot Study (RaMPS)

    DOE Data Explorer

    Blair, John [Kansas State University; Fay, Phillip [USDA-ARS; Knapp, Alan [Colorado State University; Collins, Scott [University of New Mexico; Smith, Melinda [Yale University

    Rainfall Manipulation Plots facility (RaMPs) is a unique experimental infrastructure that allows us to manipulate precipitation events and temperature, and assess population community, and ecosystem responses in native grassland. This facility allows us to manipulate the amount and timing of individual precipitation events in replicated field plots at the Konza Prairie Long-Term Ecological Research (LTER) site. Questions we are addressing include: • What is the relative importance of more extreme precipitation patterns (increased climatic variability) vs. increased temperatures (increased climatic mean) with regard to their impact on grassland ecosystem structure and function? Both projected climate change factors are predicted to decrease soil water availability, but the mechanisms by which this resource depletion occurs differ. • Will altered precipitation patterns, increased temperatures and their interaction increase opportunities for invasion by exotic species? • Will long-term (6-10 yr) trajectories of community and ecosystem change in response to more extreme precipitation patterns continue at the same rate as initial responses from years 1-6? Or will non-linear change occur as potential ecological thresholds are crossed? And will increased temperatures accelerate these responses? Data sets are available as ASCII files, in Excel spreadsheets, and in SAS format. (Taken from http://www.konza.ksu.edu/ramps/backgrnd.html

  17. Material properties from contours: New insights on object perception.

    PubMed

    Pinna, Baingio; Deiana, Katia

    2015-10-01

    In this work we explored phenomenologically the visual complexity of the material attributes on the basis of the contours that define the boundaries of a visual object. The starting point is the rich and pioneering work done by Gestalt psychologists and, more in detail, by Rubin, who first demonstrated that contours contain most of the information related to object perception, like the shape, the color and the depth. In fact, by investigating simple conditions like those used by Gestalt psychologists, mostly consisting of contours only, we demonstrated that the phenomenal complexity of the material attributes emerges through appropriate manipulation of the contours. A phenomenological approach, analogous to the one used by Gestalt psychologists, was used to answer the following questions. What are contours? Which attributes can be phenomenally defined by contours? Are material properties determined only by contours? What is the visual syntactic organization of object attributes? The results of this work support the idea of a visual syntactic organization as a new kind of object formation process useful to understand the language of vision that creates well-formed attribute organizations. The syntax of visual attributes can be considered as a new way to investigate the modular coding and, more generally, the binding among attributes, i.e., the issue of how the brain represents the pairing of shape and material properties. PMID:26072333

  18. Spatial profile of contours inducing long-range color assimilation

    PubMed Central

    DEVINCK, FRÉDÉRIC; SPILLMANN, LOTHAR; WERNER, JOHN S.

    2008-01-01

    Color induction was measured using a matching method for two spatial patterns, each composed of double contours. In one pattern (the standard), the contours had sharp edges to induce the Watercolor Effect (WCE); in the other, the two contours had a spatial taper so that the overall profile produced a sawtooth edge, or ramped stimulus. These patterns were chosen based on our previous study demonstrating that the strength of the chromatic WCE depends on a luminance difference between the two contours. Low-pass chromatic mechanisms, unlike bandpass luminance mechanisms, may be expected to be insensitive to the difference between the two spatial profiles. The strength of the watercolor spreading was similar for the two patterns at narrow widths of the contour possibly because of chromatic aberration, but with wider contours, the standard stimulus produced stronger assimilation than the ramped stimulus. This research suggests that luminance-dependent chromatic mechanisms mediate the WCE and that these mechanisms are sensitive to differences in the two spatial profiles of the pattern contours only when they are wide. PMID:16961998

  19. Adaptive pseudo dilation for gestalt edge grouping and contour detection.

    PubMed

    Papari, Giuseppe; Petkov, Nicolai

    2008-10-01

    We consider the problem of detecting object contours in natural images. In many cases, local luminance changes turn out to be stronger in textured areas than on object contours. Therefore, local edge features, which only look at a small neighborhood of each pixel, cannot be reliable indicators of the presence of a contour, and some global analysis is needed. We introduce a new morphological operator, called adaptive pseudo-dilation (APD), which uses context dependent structuring elements in order to identify long curvilinear structure in the edge map. We show that grouping edge pixels as the connected components of the output of APD results in a good agreement with the gestalt law of good continuation. The novelty of this operator is that dilation is limited to the Voronoi cell of each edge pixel. An efficient implementation of APD is presented. The grouping algorithm is then embedded in a multithreshold contour detector. At each threshold level, small groups of edges are removed, and contours are completed by means of a generalized reconstruction from markers. The use of different thresholds makes the algorithm much less sensitive to the values of the input parameters. Both qualitative and quantitative comparison with existing approaches prove the superiority of the proposed contour detector in terms of larger amount of suppressed texture and more effective detection of low-contrast contours. PMID:18784041

  20. Spatial profile of contours inducing long-range color assimilation.

    PubMed

    Devinck, Frédéric; Spillmann, Lothar; Werner, John S

    2006-01-01

    Color induction was measured using a matching method for two spatial patterns, each composed of double contours. In one pattern (the standard), the contours had sharp edges to induce the Watercolor Effect (WCE); in the other, the two contours had a spatial taper so that the overall profile produced a sawtooth edge, or ramped stimulus. These patterns were chosen based on our previous study demonstrating that the strength of the chromatic WCE depends on a luminance difference between the two contours. Low-pass chromatic mechanisms, unlike bandpass luminance mechanisms, may be expected to be insensitive to the difference between the two spatial profiles. The strength of the watercolor spreading was similar for the two patterns at narrow widths of the contour possibly because of chromatic aberration, but with wider contours, the standard stimulus produced stronger assimilation than the ramped stimulus. This research suggests that luminance-dependent chromatic mechanisms mediate the WCE and that these mechanisms are sensitive to differences in the two spatial profiles of the pattern contours only when they are wide. PMID:16961998

  1. Multiresolution active contour model applied on lung and colon images

    NASA Astrophysics Data System (ADS)

    Dehmeshki, Jamshid; Siddique, Musib; Wong, Wing; Chis Ster, Irina

    2004-05-01

    This paper deploys a wavelet based scale-space approach to extract the boundary of the object of interest in medical CT images. The classical approach of the active contour models consists of starting with an initial contour, to deform it under the action of some forces attracting the contour towards the edges by means of a set of forces. The mathematical model involves in the minimisation of an objective function called energy functional, which depends on the geometry of the contour as well as of the image characteristics. Various strategies could be used for the formulation of the energy functional and its optimisation. In this study, a wavelet based scale-space approach has been adopted. The coarsest scale is able to enlarge the capture region surrounding an object and avoids the trapping of contour into weak edges. The finer scales are used to refine the contour as close as possible to the boundary of the object. An adaptive scale coefficient for the balloon energy has been introduced. Four levels of resolution have been applied in order to get reproducibility of the contour despite poor different initialisations. The scheme has been applied to segment the regions of interest in CT lung and colon images. The result has been shown to be accurate and reproducible for the cases containing fat, holes and other small high intensity objects inside lung nodules as well as colon polyps.

  2. Evaluation of mandibular contour in patients with significant facial asymmetry.

    PubMed

    Fang, J-J; Tu, Y-H; Wong, T-Y; Liu, J-K; Zhang, Y-X; Leong, I-F; Chen, K-C

    2016-07-01

    Most previous studies on facial asymmetry have not specifically differentiated mandible deviation from structural asymmetry of the mandible. The purpose of this study was to assess the symmetry of the mandible by examining its contour in a cohort of patients with significant facial asymmetry. Eleven cases of facial asymmetry with chin deviation ≥10mm were enrolled. A voxel-paired median plane (optimal symmetry plane, OSP) and two landmark-based median planes were generated. The OSP was created by computing the best pairing of the bony voxels on the two sides. One side of the mandibular contour was mirrored onto the other side using the test plane. The contour differences were measured by distance and by area ratio. They were examined both in frontal and frontal downward inclined view. The contour symmetry of the mandible was that revealed by the plane that presented the best symmetry. The results showed that the OSP worked best in bisecting the contour into two symmetrical halves. Contour analysis showed relatively small discrepancies between the two sides. In conclusion, the mandibles retained an acceptable contour symmetry despite the presence of significant mandibular deviations. It is suggested that proper mandibular alignment be the primary objective in the correction of facial asymmetry. PMID:26976218

  3. Correction of EB-induced shrinkage in contour measurements

    NASA Astrophysics Data System (ADS)

    Ohashi, Takeyoshi; Hotta, Shoji; Yamaguchi, Atsuko; Tanaka, Junichi; Kawada, Hiroki

    2014-04-01

    We have proposed a new method for correcting electron beam (EB)-induced photoresist shrinkage in two-dimensional pattern contours extracted from a scanning electron microscope image. This method restores the original shrinkage-free contour from the experimentally determined "shrunk contour", based on a shrinkage model which takes into account of the elastic nature of the shrinkage phenomena caused by the photoresist-volume reduction. Verification of this shrinkage model was demonstrated by using ArF resist patterns as follows. First, the model was calibrated with the shrinkage data of several line patters with different linewidth prior to the contour correction. Next, the amount of shrinkage of elbow patterns was measured by comparing its contours obtained with small and sufficiently large EB dosages. It was found that the shrinkage of the inner edge of the elbow corner was smaller than that of the outer edge, which can be interpreted as a result of the elastic deformation. Finally, validity of shrinkage correction was examined. The model calculation correctly reproduced the observed shrinkage including its dependence on the location in the pattern. The restored contour showed a good consistency with the experimental results and the total root-mean-square error of the shrinkage correction was 0.5 nm. This result confirmed that our shrinkage model adequately describes the shrinkage of two dimensional patterns. Consequently, proposed shrinkage correction method is expected to improve the accuracy of contour measurements by a critical dimension-scanning electron microscope.

  4. Correlated Electron Phenomena in 2D Materials

    NASA Astrophysics Data System (ADS)

    Lambert, Joseph G.

    In this thesis, I present experimental results on coherent electron phenomena in layered two-dimensional materials: single layer graphene and van der Waals coupled 2D TiSe2. Graphene is a two-dimensional single-atom thick sheet of carbon atoms first derived from bulk graphite by the mechanical exfoliation technique in 2004. Low-energy charge carriers in graphene behave like massless Dirac fermions, and their density can be easily tuned between electron-rich and hole-rich quasiparticles with electrostatic gating techniques. The sharp interfaces between regions of different carrier densities form barriers with selective transmission, making them behave as partially reflecting mirrors. When two of these interfaces are set at a separation distance within the phase coherence length of the carriers, they form an electronic version of a Fabry-Perot cavity. I present measurements and analysis of multiple Fabry-Perot modes in graphene with parallel electrodes spaced a few hundred nanometers apart. Transition metal dichalcogenide (TMD) TiSe2 is part of the family of materials that coined the term "materials beyond graphene". It contains van der Waals coupled trilayer stacks of Se-Ti-Se. Many TMD materials exhibit a host of interesting correlated electronic phases. In particular, TiSe2 exhibits chiral charge density waves (CDW) below TCDW ˜ 200 K. Upon doping with copper, the CDW state gets suppressed with Cu concentration, and CuxTiSe2 becomes superconducting with critical temperature of T c = 4.15 K. There is still much debate over the mechanisms governing the coexistence of the two correlated electronic phases---CDW and superconductivity. I will present some of the first conductance spectroscopy measurements of proximity coupled superconductor-CDW systems. Measurements reveal a proximity-induced critical current at the Nb-TiSe2 interfaces, suggesting pair correlations in the pure TiSe2. The results indicate that superconducting order is present concurrently with CDW in

  5. The Influence of Contour on Similarity Perception of Star Glyphs.

    PubMed

    Fuchs, Johannes; Isenberg, Petra; Bezerianos, Anastasia; Fischer, Fabian; Bertini, Enrico

    2014-12-01

    We conducted three experiments to investigate the effects of contours on the detection of data similarity with star glyph variations. A star glyph is a small, compact, data graphic that represents a multi-dimensional data point. Star glyphs are often used in small-multiple settings, to represent data points in tables, on maps, or as overlays on other types of data graphics. In these settings, an important task is the visual comparison of the data points encoded in the star glyph, for example to find other similar data points or outliers. We hypothesized that for data comparisons, the overall shape of a star glyph--enhanced through contour lines--would aid the viewer in making accurate similarity judgments. To test this hypothesis, we conducted three experiments. In our first experiment, we explored how the use of contours influenced how visualization experts and trained novices chose glyphs with similar data values. Our results showed that glyphs without contours make the detection of data similarity easier. Given these results, we conducted a second study to understand intuitive notions of similarity. Star glyphs without contours most intuitively supported the detection of data similarity. In a third experiment, we tested the effect of star glyph reference structures (i.e., tickmarks and gridlines) on the detection of similarity. Surprisingly, our results show that adding reference structures does improve the correctness of similarity judgments for star glyphs with contours, but not for the standard star glyph. As a result of these experiments, we conclude that the simple star glyph without contours performs best under several criteria, reinforcing its practice and popularity in the literature. Contours seem to enhance the detection of other types of similarity, e. g., shape similarity and are distracting when data similarity has to be judged. Based on these findings we provide design considerations regarding the use of contours and reference structures on star

  6. Hypothetical Outcome Plots Outperform Error Bars and Violin Plots for Inferences about Reliability of Variable Ordering.

    PubMed

    Hullman, Jessica; Resnick, Paul; Adar, Eytan

    2015-01-01

    Many visual depictions of probability distributions, such as error bars, are difficult for users to accurately interpret. We present and study an alternative representation, Hypothetical Outcome Plots (HOPs), that animates a finite set of individual draws. In contrast to the statistical background required to interpret many static representations of distributions, HOPs require relatively little background knowledge to interpret. Instead, HOPs enables viewers to infer properties of the distribution using mental processes like counting and integration. We conducted an experiment comparing HOPs to error bars and violin plots. With HOPs, people made much more accurate judgments about plots of two and three quantities. Accuracy was similar with all three representations for most questions about distributions of a single quantity. PMID:26571487

  7. Hypothetical Outcome Plots Outperform Error Bars and Violin Plots for Inferences about Reliability of Variable Ordering

    PubMed Central

    Hullman, Jessica; Resnick, Paul; Adar, Eytan

    2015-01-01

    Many visual depictions of probability distributions, such as error bars, are difficult for users to accurately interpret. We present and study an alternative representation, Hypothetical Outcome Plots (HOPs), that animates a finite set of individual draws. In contrast to the statistical background required to interpret many static representations of distributions, HOPs require relatively little background knowledge to interpret. Instead, HOPs enables viewers to infer properties of the distribution using mental processes like counting and integration. We conducted an experiment comparing HOPs to error bars and violin plots. With HOPs, people made much more accurate judgments about plots of two and three quantities. Accuracy was similar with all three representations for most questions about distributions of a single quantity. PMID:26571487

  8. CYP2D7 Sequence Variation Interferes with TaqMan CYP2D6*15 and *35 Genotyping

    PubMed Central

    Riffel, Amanda K.; Dehghani, Mehdi; Hartshorne, Toinette; Floyd, Kristen C.; Leeder, J. Steven; Rosenblatt, Kevin P.; Gaedigk, Andrea

    2016-01-01

    TaqMan™ genotyping assays are widely used to genotype CYP2D6, which encodes a major drug metabolizing enzyme. Assay design for CYP2D6 can be challenging owing to the presence of two pseudogenes, CYP2D7 and CYP2D8, structural and copy number variation and numerous single nucleotide polymorphisms (SNPs) some of which reflect the wild-type sequence of the CYP2D7 pseudogene. The aim of this study was to identify the mechanism causing false-positive CYP2D6*15 calls and remediate those by redesigning and validating alternative TaqMan genotype assays. Among 13,866 DNA samples genotyped by the CompanionDx® lab on the OpenArray platform, 70 samples were identified as heterozygotes for 137Tins, the key SNP of CYP2D6*15. However, only 15 samples were confirmed when tested with the Luminex xTAG CYP2D6 Kit and sequencing of CYP2D6-specific long range (XL)-PCR products. Genotype and gene resequencing of CYP2D6 and CYP2D7-specific XL-PCR products revealed a CC>GT dinucleotide SNP in exon 1 of CYP2D7 that reverts the sequence to CYP2D6 and allows a TaqMan assay PCR primer to bind. Because CYP2D7 also carries a Tins, a false-positive mutation signal is generated. This CYP2D7 SNP was also responsible for generating false-positive signals for rs769258 (CYP2D6*35) which is also located in exon 1. Although alternative CYP2D6*15 and *35 assays resolved the issue, we discovered a novel CYP2D6*15 subvariant in one sample that carries additional SNPs preventing detection with the alternate assay. The frequency of CYP2D6*15 was 0.1% in this ethnically diverse U.S. population sample. In addition, we also discovered linkage between the CYP2D7 CC>GT dinucleotide SNP and the 77G>A (rs28371696) SNP of CYP2D6*43. The frequency of this tentatively functional allele was 0.2%. Taken together, these findings emphasize that regardless of how careful genotyping assays are designed and evaluated before being commercially marketed, rare or unknown SNPs underneath primer and/or probe regions can impact

  9. CYP2D7 Sequence Variation Interferes with TaqMan CYP2D6 (*) 15 and (*) 35 Genotyping.

    PubMed

    Riffel, Amanda K; Dehghani, Mehdi; Hartshorne, Toinette; Floyd, Kristen C; Leeder, J Steven; Rosenblatt, Kevin P; Gaedigk, Andrea

    2015-01-01

    TaqMan™ genotyping assays are widely used to genotype CYP2D6, which encodes a major drug metabolizing enzyme. Assay design for CYP2D6 can be challenging owing to the presence of two pseudogenes, CYP2D7 and CYP2D8, structural and copy number variation and numerous single nucleotide polymorphisms (SNPs) some of which reflect the wild-type sequence of the CYP2D7 pseudogene. The aim of this study was to identify the mechanism causing false-positive CYP2D6 (*) 15 calls and remediate those by redesigning and validating alternative TaqMan genotype assays. Among 13,866 DNA samples genotyped by the CompanionDx® lab on the OpenArray platform, 70 samples were identified as heterozygotes for 137Tins, the key SNP of CYP2D6 (*) 15. However, only 15 samples were confirmed when tested with the Luminex xTAG CYP2D6 Kit and sequencing of CYP2D6-specific long range (XL)-PCR products. Genotype and gene resequencing of CYP2D6 and CYP2D7-specific XL-PCR products revealed a CC>GT dinucleotide SNP in exon 1 of CYP2D7 that reverts the sequence to CYP2D6 and allows a TaqMan assay PCR primer to bind. Because CYP2D7 also carries a Tins, a false-positive mutation signal is generated. This CYP2D7 SNP was also responsible for generating false-positive signals for rs769258 (CYP2D6 (*) 35) which is also located in exon 1. Although alternative CYP2D6 (*) 15 and (*) 35 assays resolved the issue, we discovered a novel CYP2D6 (*) 15 subvariant in one sample that carries additional SNPs preventing detection with the alternate assay. The frequency of CYP2D6 (*) 15 was 0.1% in this ethnically diverse U.S. population sample. In addition, we also discovered linkage between the CYP2D7 CC>GT dinucleotide SNP and the 77G>A (rs28371696) SNP of CYP2D6 (*) 43. The frequency of this tentatively functional allele was 0.2%. Taken together, these findings emphasize that regardless of how careful genotyping assays are designed and evaluated before being commercially marketed, rare or unknown SNPs underneath primer

  10. A closed-form solution for noise contours

    NASA Technical Reports Server (NTRS)

    Stewart, E. C.; Carson, T. M.

    1979-01-01

    An analytical approach for generating noise contours that overcome the difficulties of existing programs is described. This approach is valid for arbitrarily complex paths and reveals the importance of various factors that influence contour shape and size. The calculations are simple enough to be implemented on a small, hand-held programmable calculator, and a program for the HP-67 calculator is illustrated. The method is fast, simple, and gives the area, the contour, and its extremities for arbitrary flight paths for both takeoffs and landings.

  11. Surface Boundary Contour Strengthens Image Dominance in Binocular Competition

    PubMed Central

    Xu, Jingping P

    2009-01-01

    We used a binocular rivalry stimulus with one half-image having a vertical grating disc surrounded by horizontal grating, and the other half-image having a horizontal grating disc with a variable spatial phase relative to the surrounding horizontal grating. We found that increasing the phase-shift of the horizontal grating disc, which strengthens the boundary contour, progressively increases its predominance. But the predominance is little affected when a constant gray ring (boundary contour) is added onto the rim of the incrementally phase-shifted horizontal grating. This suggests the influence of boundary contour supersede that of the center-surround-interaction caused by the phase-shift. PMID:19913047

  12. iTagPlot: an accurate computation and interactive drawing tool for tag density plot

    PubMed Central

    Kim, Sung-Hwan; Ezenwoye, Onyeka; Cho, Hwan-Gue; Robertson, Keith D.; Choi, Jeong-Hyeon

    2015-01-01

    Motivation: Tag density plots are very important to intuitively reveal biological phenomena from capture-based sequencing data by visualizing the normalized read depth in a region. Results: We have developed iTagPlot to compute tag density across functional features in parallel using multicores and a grid engine and to interactively explore it in a graphical user interface. It allows us to stratify features by defining groups based on biological function and measurement, summary statistics and unsupervised clustering. Availability and implementation: http://sourceforge.net/projects/itagplot/. Contact: jechoi@gru.edu and jeochoi@gmail.com Supplementary information: Supplementary data are available at Bioinformatics online. PMID:25792550

  13. Details of Side Load Test Data and Analysis for a Truncated Ideal Contour Nozzle and a Parabolic Contour Nozzle

    NASA Technical Reports Server (NTRS)

    Ruf, Joseph H.; McDaniels, David M.; Brown, Andrew M.

    2010-01-01

    Two cold flow subscale nozzles were tested for side load characteristics during simulated nozzle start transients. The two test article contours were a truncated ideal and a parabolic. The current paper is an extension of a 2009 AIAA JPC paper on the test results for the same two nozzle test articles. The side load moments were measured with the strain tube approach in MSFC s Nozzle Test Facility. The processing techniques implemented to convert the strain gage signals into side load moment data are explained. Nozzle wall pressure profiles for separated nozzle flow at many NPRs are presented and discussed in detail. The effect of the test cell diffuser inlet on the parabolic nozzle s wall pressure profiles for separated flow is shown. The maximum measured side load moments for the two contours are compared. The truncated ideal contour s peak side load moment was 45% of that of the parabolic contour. The calculated side load moments, via mean-plus-three-standard-deviations at each nozzle pressure ratio, reproduced the characteristics and absolute values of measured maximums for both contours. The effect of facility vibration on the measured side load moments is quantified and the effect on uncertainty is calculated. The nozzle contour designs are discussed and the impact of a minor fabrication flaw in the nozzle contours is explained.

  14. Analysis and Modeling of soil hydrology under different soil additives in artificial runoff plots

    NASA Astrophysics Data System (ADS)

    Ruidisch, M.; Arnhold, S.; Kettering, J.; Huwe, B.; Kuzyakov, Y.; Ok, Y.; Tenhunen, J. D.

    2009-12-01

    The impact of monsoon events during June and July in the Korean project region Haean Basin, which is located in the northeastern part of South Korea plays a key role for erosion, leaching and groundwater pollution risk by agrochemicals. Therefore, the project investigates the main hydrological processes in agricultural soils under field and laboratory conditions on different scales (plot, hillslope and catchment). Soil hydrological parameters were analysed depending on different soil additives, which are known for prevention of soil erosion and nutrient loss as well as increasing of water infiltration, aggregate stability and soil fertility. Hence, synthetic water-soluble Polyacrylamides (PAM), Biochar (Black Carbon mixed with organic fertilizer), both PAM and Biochar were applied in runoff plots at three agricultural field sites. Additionally, as control a subplot was set up without any additives. The field sites were selected in areas with similar hillslope gradients and with emphasis on the dominant land management form of dryland farming in Haean, which is characterised by row planting and row covering by foil. Hydrological parameters like satured water conductivity, matrix potential and water content were analysed by infiltration experiments, continuous tensiometer measurements, time domain reflectometry as well as pressure plates to indentify characteristic water retention curves of each horizon. Weather data were observed by three weather stations next to the runoff plots. Measured data also provide the input data for modeling water transport in the unsatured zone in runoff plots with HYDRUS 1D/2D/3D and SWAT (Soil & Water Assessment Tool).

  15. Direct fabrication of high-resolution three-dimensional polymeric scaffolds using electrohydrodynamic hot jet plotting

    NASA Astrophysics Data System (ADS)

    Wei, Chuang; Dong, Jingyan

    2013-02-01

    This paper presents the direct three-dimensional (3D) fabrication of polymer scaffolds with sub-10 µm structures using electrohydrodynamic jet (EHD-jet) plotting of melted thermoplastic polymers. Traditional extrusion-based fabrication approaches of 3D periodic porous structures are very limited in their resolution, due to the excessive pressure requirement for extruding highly viscous thermoplastic polymers. EHD-jet printing has become a high-resolution alternative to other forms of nozzle deposition-based fabrication approaches by generating micro-scale liquid droplets or a fine jet through the application of a large electrical voltage between the nozzle and the substrate. In this study, we successfully apply EHD-jet plotting technology with melted biodegradable polymer (polycaprolactone, or PCL) for the fabrication of 2D patterns and 3D periodic porous scaffold structures in potential tissue engineering applications. Process conditions (e.g. electrical voltage, pressure, plotting speed) have been thoroughly investigated to achieve reliable jet printing of fine filaments. We have demonstrated for the first time that the EHD-jet plotting process is capable of the fabrication of 3D periodic structures with sub-10 µm resolution, which has great potential in advanced biomedical applications, such as cell alignment and guidance.

  16. The Impact of Interactivity on Comprehending 2D and 3D Visualizations of Movement Data.

    PubMed

    Amini, Fereshteh; Rufiange, Sebastien; Hossain, Zahid; Ventura, Quentin; Irani, Pourang; McGuffin, Michael J

    2015-01-01

    GPS, RFID, and other technologies have made it increasingly common to track the positions of people and objects over time as they move through two-dimensional spaces. Visualizing such spatio-temporal movement data is challenging because each person or object involves three variables (two spatial variables as a function of the time variable), and simply plotting the data on a 2D geographic map can result in overplotting and occlusion that hides details. This also makes it difficult to understand correlations between space and time. Software such as GeoTime can display such data with a three-dimensional visualization, where the 3rd dimension is used for time. This allows for the disambiguation of spatially overlapping trajectories, and in theory, should make the data clearer. However, previous experimental comparisons of 2D and 3D visualizations have so far found little advantage in 3D visualizations, possibly due to the increased complexity of navigating and understanding a 3D view. We present a new controlled experimental comparison of 2D and 3D visualizations, involving commonly performed tasks that have not been tested before, and find advantages in 3D visualizations for more complex tasks. In particular, we tease out the effects of various basic interactions and find that the 2D view relies significantly on "scrubbing" the timeline, whereas the 3D view relies mainly on 3D camera navigation. Our work helps to improve understanding of 2D and 3D visualizations of spatio-temporal data, particularly with respect to interactivity. PMID:26357026

  17. Historic Image: Aerial view of Mount of Victory Plot. Photograph ...

    Library of Congress Historic Buildings Survey, Historic Engineering Record, Historic Landscapes Survey

    Historic Image: Aerial view of Mount of Victory Plot. Photograph 1961. NCA History Collection - Cypress Hills National Cemetery, Mount of Victory Plot Unit, 625 Jamaica Avenue, Brooklyn, Kings County, NY

  18. User guide for STRMLN: A boundary-layer program for contoured wind-tunnel liner design

    NASA Technical Reports Server (NTRS)

    Anderson, E. C.

    1979-01-01

    A 2-D boundary layer computer code developed to process data for an arbitrary number of streamlines is presented. Provisions are included for the computer code to determine either mass transfer rates necessary for an effective boundary layer displacement of zero thickness or the effective displacement thickness for a specified mass transfer-rate distribution. The computer code was developed to be compatible with other computer codes which are being modified and/or developed at the NASA-Langley Research Center in order to design the three dimensional, contoured, wind tunnel liner used in transonic testing of a laminar flow control system installed on a supercritical airfoil section. A brief discription of the liner design procedure, representative liner calculations, adaptive-wall design for a two dimensional wind tunnel test, and other applications are reported.

  19. Electric-discharge contour-dynamics model: the effects of curvature and finite conductivity.

    PubMed

    Arrayás, M; Fontelos, M A

    2011-08-01

    In this paper we present the complete derivation of the effective contour model for electrical discharges which appears as the asymptotic limit of the minimal streamer model for the propagation of electric discharges, when the electron diffusion is small. It consists of two integro-differential equations defined at the boundary of the plasma region: one for the motion and a second equation for the net charge density at the interface. We have computed explicit solutions with cylindrical symmetry and found the dispersion relation for small symmetry-breaking perturbations in the case of finite resistivity. We implement a numerical procedure to solve our model in general situations. As a result we compute the dispersion relation for the cylindrical case and compare it with the analytical predictions. Comparisons with experimental data for a 2D positive streamers discharge are provided and predictions confirmed. PMID:21929117

  20. Differential CYP 2D6 Metabolism Alters Primaquine Pharmacokinetics

    PubMed Central

    Potter, Brittney M. J.; Xie, Lisa H.; Vuong, Chau; Zhang, Jing; Zhang, Ping; Duan, Dehui; Luong, Thu-Lan T.; Bandara Herath, H. M. T.; Dhammika Nanayakkara, N. P.; Tekwani, Babu L.; Walker, Larry A.; Nolan, Christina K.; Sciotti, Richard J.; Zottig, Victor E.; Smith, Philip L.; Paris, Robert M.; Read, Lisa T.; Li, Qigui; Pybus, Brandon S.; Sousa, Jason C.; Reichard, Gregory A.

    2015-01-01

    Primaquine (PQ) metabolism by the cytochrome P450 (CYP) 2D family of enzymes is required for antimalarial activity in both humans (2D6) and mice (2D). Human CYP 2D6 is highly polymorphic, and decreased CYP 2D6 enzyme activity has been linked to decreased PQ antimalarial activity. Despite the importance of CYP 2D metabolism in PQ efficacy, the exact role that these enzymes play in PQ metabolism and pharmacokinetics has not been extensively studied in vivo. In this study, a series of PQ pharmacokinetic experiments were conducted in mice with differential CYP 2D metabolism characteristics, including wild-type (WT), CYP 2D knockout (KO), and humanized CYP 2D6 (KO/knock-in [KO/KI]) mice. Plasma and liver pharmacokinetic profiles from a single PQ dose (20 mg/kg of body weight) differed significantly among the strains for PQ and carboxy-PQ. Additionally, due to the suspected role of phenolic metabolites in PQ efficacy, these were probed using reference standards. Levels of phenolic metabolites were highest in mice capable of metabolizing CYP 2D6 substrates (WT and KO/KI 2D6 mice). PQ phenolic metabolites were present in different quantities in the two strains, illustrating species-specific differences in PQ metabolism between the human and mouse enzymes. Taking the data together, this report furthers understanding of PQ pharmacokinetics in the context of differential CYP 2D metabolism and has important implications for PQ administration in humans with different levels of CYP 2D6 enzyme activity. PMID:25645856

  1. Segmentation and Tracking of Cytoskeletal Filaments Using Open Active Contours

    PubMed Central

    Smith, Matthew B.; Li, Hongsheng; Shen, Tian; Huang, Xiaolei; Yusuf, Eddy; Vavylonis, Dimitrios

    2010-01-01

    We use open active contours to quantify cytoskeletal structures imaged by fluorescence microscopy in two and three dimensions. We developed an interactive software tool for segmentation, tracking, and visualization of individual fibers. Open active contours are parametric curves that deform to minimize the sum of an external energy derived from the image and an internal bending and stretching energy. The external energy generates (i) forces that attract the contour toward the central bright line of a filament in the image, and (ii) forces that stretch the active contour toward the ends of bright ridges. Images of simulated semiflexible polymers with known bending and torsional rigidity are analyzed to validate the method. We apply our methods to quantify the conformations and dynamics of actin in two examples: actin filaments imaged by TIRF microscopy in vitro, and actin cables in fission yeast imaged by spinning disk confocal microscopy. PMID:20814909

  2. Shaping of the continental rise by deep geostrophic contour currents.

    PubMed

    Heezen, B C; Hollister, C D; Ruddiman, W F

    1966-04-22

    Geostrophic contour-following bottom currents involved in the deep thermohaline circulation of the world ocean appear to be the principal agents which control the shape of the continental rise and other sediment bodies. PMID:17815077

  3. Robust contour decomposition using a constant curvature criterion

    NASA Technical Reports Server (NTRS)

    Wuescher, Daniel M.; Boyer, Kim L.

    1991-01-01

    The problem of decomposing an extended boundary or contour into simple primitives is addressed with particular emphasis on Laplacian-of-Gaussian (LoG) zero-crossing contours. A technique is introduced for partitioning such contours into constant curvature segments. A nonlinear `blip' filter matched to the impairment signature of the curvature computation process, an overlapped voting scheme, and a sequential contiguous segment extraction mechanism are used. This technique is insensitive to reasonable changes in algorithm parameters and robust to noise and minor viewpoint-induced distortions in the contour shape, such as those encountered between stereo image pairs. The results vary smoothly with the data, and local perturbations induce only local changes in the result. Robustness and insensitivity are experimentally verified.

  4. Simple method for prediction of aircraft noise contours

    NASA Technical Reports Server (NTRS)

    Stewart, E. C.; Carson, T. M.

    1980-01-01

    A method for generating noise contours more rapidly and more simply than previously used programs is discussed. The method gives the area, the noise contour, and its extremities for an arbitrarily complex flight path for both takeoffs and landings with relative ease. The analysis reveals the fundamental nature of the contours and how the various factors that influence its size and shape enter into the analysis. It is noted that the effects of ground attenuation and shielding are omitted as they are important only on the initial portion of flight and are highly dependent upon aircraft configuration. However, the analysis shows that these effects could be included. It is emphasized the the single-event contour is an obvious choice for purposes of minimizing noise impact.

  5. PLOT3D/AMES, SGI IRIS VERSION (WITHOUT TURB3D)

    NASA Technical Reports Server (NTRS)

    Buning, P.

    1994-01-01

    five groups: 1) Grid Functions for grids, grid-checking, etc.; 2) Scalar Functions for contour or carpet plots of density, pressure, temperature, Mach number, vorticity magnitude, helicity, etc.; 3) Vector Functions for vector plots of velocity, vorticity, momentum, and density gradient, etc.; 4) Particle Trace Functions for rake-like plots of particle flow or vortex lines; and 5) Shock locations based on pressure gradient. TURB3D is a modification of PLOT3D which is used for viewing CFD simulations of incompressible turbulent flow. Input flow data consists of pressure, velocity and vorticity. Typical quantities to plot include local fluctuations in flow quantities and turbulent production terms, plotted in physical or wall units. PLOT3D/TURB3D includes both TURB3D and PLOT3D because the operation of TURB3D is identical to PLOT3D, and there is no additional sample data or printed documentation for TURB3D. Graphical capabilities of PLOT3D version 3.6b+ vary among the implementations available through COSMIC. Customers are encouraged to purchase and carefully review the PLOT3D manual before ordering the program for a specific computer and graphics library. There is only one manual for use with all implementations of PLOT3D, and although this manual generally assumes that the Silicon Graphics Iris implementation is being used, informative comments concerning other implementations appear throughout the text. With all implementations, the visual representation of the object and flow field created by PLOT3D consists of points, lines, and polygons. Points can be represented with dots or symbols, color can be used to denote data values, and perspective is used to show depth. Differences among implementations impact the program's ability to use graphical features that are based on 3D polygons, the user's ability to manipulate the graphical displays, and the user's ability to obtain alternate forms of output. In each of these areas, the IRIS implementation of PLOT3D offers

  6. PLOT3D/AMES, UNIX SUPERCOMPUTER AND SGI IRIS VERSION (WITHOUT TURB3D)

    NASA Technical Reports Server (NTRS)

    Buning, P.

    1994-01-01

    five groups: 1) Grid Functions for grids, grid-checking, etc.; 2) Scalar Functions for contour or carpet plots of density, pressure, temperature, Mach number, vorticity magnitude, helicity, etc.; 3) Vector Functions for vector plots of velocity, vorticity, momentum, and density gradient, etc.; 4) Particle Trace Functions for rake-like plots of particle flow or vortex lines; and 5) Shock locations based on pressure gradient. TURB3D is a modification of PLOT3D which is used for viewing CFD simulations of incompressible turbulent flow. Input flow data consists of pressure, velocity and vorticity. Typical quantities to plot include local fluctuations in flow quantities and turbulent production terms, plotted in physical or wall units. PLOT3D/TURB3D includes both TURB3D and PLOT3D because the operation of TURB3D is identical to PLOT3D, and there is no additional sample data or printed documentation for TURB3D. Graphical capabilities of PLOT3D version 3.6b+ vary among the implementations available through COSMIC. Customers are encouraged to purchase and carefully review the PLOT3D manual before ordering the program for a specific computer and graphics library. There is only one manual for use with all implementations of PLOT3D, and although this manual generally assumes that the Silicon Graphics Iris implementation is being used, informative comments concerning other implementations appear throughout the text. With all implementations, the visual representation of the object and flow field created by PLOT3D consists of points, lines, and polygons. Points can be represented with dots or symbols, color can be used to denote data values, and perspective is used to show depth. Differences among implementations impact the program's ability to use graphical features that are based on 3D polygons, the user's ability to manipulate the graphical displays, and the user's ability to obtain alternate forms of output. In addition to providing the advantages of performing complex

  7. PLOT3D/AMES, UNIX SUPERCOMPUTER AND SGI IRIS VERSION (WITH TURB3D)

    NASA Technical Reports Server (NTRS)

    Buning, P.

    1994-01-01

    five groups: 1) Grid Functions for grids, grid-checking, etc.; 2) Scalar Functions for contour or carpet plots of density, pressure, temperature, Mach number, vorticity magnitude, helicity, etc.; 3) Vector Functions for vector plots of velocity, vorticity, momentum, and density gradient, etc.; 4) Particle Trace Functions for rake-like plots of particle flow or vortex lines; and 5) Shock locations based on pressure gradient. TURB3D is a modification of PLOT3D which is used for viewing CFD simulations of incompressible turbulent flow. Input flow data consists of pressure, velocity and vorticity. Typical quantities to plot include local fluctuations in flow quantities and turbulent production terms, plotted in physical or wall units. PLOT3D/TURB3D includes both TURB3D and PLOT3D because the operation of TURB3D is identical to PLOT3D, and there is no additional sample data or printed documentation for TURB3D. Graphical capabilities of PLOT3D version 3.6b+ vary among the implementations available through COSMIC. Customers are encouraged to purchase and carefully review the PLOT3D manual before ordering the program for a specific computer and graphics library. There is only one manual for use with all implementations of PLOT3D, and although this manual generally assumes that the Silicon Graphics Iris implementation is being used, informative comments concerning other implementations appear throughout the text. With all implementations, the visual representation of the object and flow field created by PLOT3D consists of points, lines, and polygons. Points can be represented with dots or symbols, color can be used to denote data values, and perspective is used to show depth. Differences among implementations impact the program's ability to use graphical features that are based on 3D polygons, the user's ability to manipulate the graphical displays, and the user's ability to obtain alternate forms of output. In addition to providing the advantages of performing complex

  8. PLOT3D/AMES, SGI IRIS VERSION (WITH TURB3D)

    NASA Technical Reports Server (NTRS)

    Buning, P.

    1994-01-01

    five groups: 1) Grid Functions for grids, grid-checking, etc.; 2) Scalar Functions for contour or carpet plots of density, pressure, temperature, Mach number, vorticity magnitude, helicity, etc.; 3) Vector Functions for vector plots of velocity, vorticity, momentum, and density gradient, etc.; 4) Particle Trace Functions for rake-like plots of particle flow or vortex lines; and 5) Shock locations based on pressure gradient. TURB3D is a modification of PLOT3D which is used for viewing CFD simulations of incompressible turbulent flow. Input flow data consists of pressure, velocity and vorticity. Typical quantities to plot include local fluctuations in flow quantities and turbulent production terms, plotted in physical or wall units. PLOT3D/TURB3D includes both TURB3D and PLOT3D because the operation of TURB3D is identical to PLOT3D, and there is no additional sample data or printed documentation for TURB3D. Graphical capabilities of PLOT3D version 3.6b+ vary among the implementations available through COSMIC. Customers are encouraged to purchase and carefully review the PLOT3D manual before ordering the program for a specific computer and graphics library. There is only one manual for use with all implementations of PLOT3D, and although this manual generally assumes that the Silicon Graphics Iris implementation is being used, informative comments concerning other implementations appear throughout the text. With all implementations, the visual representation of the object and flow field created by PLOT3D consists of points, lines, and polygons. Points can be represented with dots or symbols, color can be used to denote data values, and perspective is used to show depth. Differences among implementations impact the program's ability to use graphical features that are based on 3D polygons, the user's ability to manipulate the graphical displays, and the user's ability to obtain alternate forms of output. In each of these areas, the IRIS implementation of PLOT3D offers

  9. SEM-contour shape analysis based on circuit structure for advanced systematic defect inspection

    NASA Astrophysics Data System (ADS)

    Toyoda, Yasutaka; Shindo, Hiroyuki; Hojo, Yutaka; Fuchimoto, Daisuke

    2014-04-01

    We have developed a practicable measurement technique that can help to achieve reliable inspections for systematic defects in advanced semiconductor devices. Systematic defects occurring in the design and mask processes are a dominant component of integrated circuit yield loss in nano-scaled technologies. Therefore, it is essential to ensure systematic defects are detected at an early stage of wafer fabrication. In the past, printed pattern shapes have been evaluated by human eyes or by taking manual critical dimension (CD) measurements. However, these operations are sometimes unstable and inaccurate. Last year, we proposed a new technique for taking measurements by using a SEM contour [1]. This technique enables a highly precise quantification of various complex 2D shaped patterns by comparing a contour extracted from a SEM image using a CD measurement algorithm and an ideal pattern. We improved this technique to enable the carrying out of inspections suitable for every pattern structure required for minimizing the process margin. This technique quantifies a pattern shape of a target-layer pattern using information on a multi-layered circuit structure. This enabled it to confirm the existence of a critical defect in a circuit connecting upper/lower-layers. This paper describes the improved technique and the evaluation results obtained in evaluating it in detail.

  10. 2D to 3D to 2D Dimensionality Crossovers in Thin BSCCO Films

    NASA Astrophysics Data System (ADS)

    Williams, Gary A.

    2003-03-01

    With increasing temperature the superfluid fraction in very thin BSCCO films undergoes a series of dimensionality crossovers. At low temperatures the strong anisotropy causes the thermal excitations to be 2D pancake-antipancake pairs in uncoupled layers. At higher temperatures where the c-axis correlation length becomes larger than a layer there is a crossover to 3D vortex loops. These are initially elliptical, but as the 3D Tc is approached they become more circular as the anisotropy scales away, as modeled by Shenoy and Chattopadhyay [1]. Close to Tc when the correlation length becomes comparable to the film thickness there is a further crossover to a 2D Kosterlitz-Thouless transition, with a drop of the superfluid fraction to zero at T_KT which can be of the order of 1 K below T_c. Good agreement with this model is found for experiments on thin BSCCO 2212 films [2]. 1. S. R. Shenoy and B. Chattopadhyay, Phys. Rev. B 51, 9129 (1995). 2. K. Osborn et al., cond-mat/0204417.

  11. Mechanical characterization of 2D, 2D stitched, and 3D braided/RTM materials

    NASA Technical Reports Server (NTRS)

    Deaton, Jerry W.; Kullerd, Susan M.; Portanova, Marc A.

    1993-01-01

    Braided composite materials have potential for application in aircraft structures. Fuselage frames, floor beams, wing spars, and stiffeners are examples where braided composites could find application if cost effective processing and damage tolerance requirements are met. Another important consideration for braided composites relates to their mechanical properties and how they compare to the properties of composites produced by other textile composite processes being proposed for these applications. Unfortunately, mechanical property data for braided composites do not appear extensively in the literature. Data are presented in this paper on the mechanical characterization of 2D triaxial braid, 2D triaxial braid plus stitching, and 3D (through-the-thickness) braid composite materials. The braided preforms all had the same graphite tow size and the same nominal braid architectures, (+/- 30 deg/0 deg), and were resin transfer molded (RTM) using the same mold for each of two different resin systems. Static data are presented for notched and unnotched tension, notched and unnotched compression, and compression after impact strengths at room temperature. In addition, some static results, after environmental conditioning, are included. Baseline tension and compression fatigue results are also presented, but only for the 3D braided composite material with one of the resin systems.

  12. Auto-propagation of contours for adaptive prostate radiation therapy

    NASA Astrophysics Data System (ADS)

    Chao, Ming; Xie, Yaoqin; Xing, Lei

    2008-09-01

    The purpose of this work is to develop an effective technique to automatically propagate contours from planning CT to cone beam CT (CBCT) to facilitate CBCT-guided prostate adaptive radiation therapy. Different from other disease sites, such as the lungs, the contour mapping here is complicated by two factors: (i) the physical one-to-one correspondence may not exist due to the insertion or removal of some image contents within the region of interest (ROI); and (ii) reduced contrast to noise ratio of the CBCT images due to increased scatter. To overcome these issues, we investigate a strategy of excluding the regions with variable contents by a careful design of a narrow shell signifying the contour of an ROI. For rectum, for example, a narrow shell with the delineated contours as its interior surface was constructed to avoid the adverse influence of the day-to-day content change inside the rectum on the contour mapping. The corresponding contours in the CBCT were found by warping the narrow shell through the use of BSpline deformable model. Both digital phantom experiments and clinical case testing were carried out to validate the proposed ROI mapping method. It was found that the approach was able to reliably warp the constructed narrow band with an accuracy better than 1.3 mm. For all five clinical cases enrolled in this study, the method yielded satisfactory results even when there were significant rectal content changes between the planning CT and CBCT scans. The overlapped area of the auto-mapped contours over 90% to the manually drawn contours is readily achievable. The proposed approach permits us to take advantage of the regional calculation algorithm yet avoiding the nuisance of rectum/bladder filling and provide a useful tool for adaptive radiotherapy of prostate in the future.

  13. Projection lithography with distortion compensation using reticle chuck contouring

    DOEpatents

    Tichenor, Daniel A.

    2001-01-01

    A chuck for holding a reflective reticle where the chuck has an insulator block with a non-planer surface contoured to cause distortion correction of EUV radiation is provided. Upon being placed on the chuck, a thin, pliable reflective reticle will conform to the contour of the chuck's non-planer surface. When employed in a scanning photolithography system, distortion in the scanned direction is corrected.

  14. Auto-propagation of contours for adaptive prostate radiation therapy.

    PubMed

    Chao, Ming; Xie, Yaoqin; Xing, Lei

    2008-09-01

    The purpose of this work is to develop an effective technique to automatically propagate contours from planning CT to cone beam CT (CBCT) to facilitate CBCT-guided prostate adaptive radiation therapy. Different from other disease sites, such as the lungs, the contour mapping here is complicated by two factors: (i) the physical one-to-one correspondence may not exist due to the insertion or removal of some image contents within the region of interest (ROI); and (ii) reduced contrast to noise ratio of the CBCT images due to increased scatter. To overcome these issues, we investigate a strategy of excluding the regions with variable contents by a careful design of a narrow shell signifying the contour of an ROI. For rectum, for example, a narrow shell with the delineated contours as its interior surface was constructed to avoid the adverse influence of the day-to-day content change inside the rectum on the contour mapping. The corresponding contours in the CBCT were found by warping the narrow shell through the use of BSpline deformable model. Both digital phantom experiments and clinical case testing were carried out to validate the proposed ROI mapping method. It was found that the approach was able to reliably warp the constructed narrow band with an accuracy better than 1.3 mm. For all five clinical cases enrolled in this study, the method yielded satisfactory results even when there were significant rectal content changes between the planning CT and CBCT scans. The overlapped area of the auto-mapped contours over 90% to the manually drawn contours is readily achievable. The proposed approach permits us to take advantage of the regional calculation algorithm yet avoiding the nuisance of rectum/bladder filling and provide a useful tool for adaptive radiotherapy of prostate in the future. PMID:18677041

  15. Linked Scatter Plots, A Powerful Exploration Tool For Very Large Sets of Spectra

    NASA Astrophysics Data System (ADS)

    Carbon, Duane Francis; Henze, Christopher

    2015-08-01

    We present a new tool, based on linked scatter plots, that is designed to efficiently explore very large spectrum data sets such as the SDSS, APOGEE, LAMOST, GAIA, and RAVE data sets.The tool works in two stages: the first uses batch processing and the second runs interactively. In the batch stage, spectra are processed through our data pipeline which computes the depths relative to the local continuum at preselected feature wavelengths. These depths, and any additional available variables such as local S/N level, magnitudes, colors, positions, and radial velocities, are the basic measured quantities used in the interactive stage.The interactive stage employs the NASA hyperwall, a configuration of 128 workstation displays (8x16 array) controlled by a parallelized software suite running on NASA's Pleiades supercomputer. Each hyperwall panel is used to display a fully linked 2-D scatter plot showing the depth of feature A vs the depth of feature B for all of the spectra. A and B change from panel to panel. The relationships between the various (A,B) strengths and any distinctive clustering, as well as unique outlier groupings, are visually apparent when examining and inter-comparing the different panels on the hyperwall. In addition, the data links between the scatter plots allow the user to apply a logical algebra to the measurements. By graphically selecting the objects in any interesting region of any 2-D plot on the hyperwall, the tool immediately and clearly shows how the selected objects are distributed in all the other 2-D plots. The selection process may be repeated multiple times and, at each step, the selections can represent a sequence of logical constraints on the measurements, revealing those objects which satisfy all the constraints thus far. The spectra of the selected objects may be examined at any time on a connected workstation display.Using over 945,000,000 depth measurements from 569,738 SDSS DR10 stellar spectra, we illustrate how to quickly

  16. JAVA SWING-BASED PLOTTING PACKAGE RESIDING WITHIN XAL

    SciTech Connect

    Shishlo, Andrei P; Chu, Paul; Pelaia II, Tom

    2007-01-01

    A data plotting package residing in the XAL tools set is presented. This package is based on Java SWING, and therefore it has the same portability as Java itself. The data types for charts, bar-charts, and color-surface plots are described. The algorithms, performance, interactive capabilities, limitations, and the best usage practices of this plotting package are discussed.

  17. Computer routine adds plotting capabilities to existing programs

    NASA Technical Reports Server (NTRS)

    Harris, J. C.; Linnekin, J. S.

    1966-01-01

    PLOTAN, a generalized plot analysis routine written for the IBM 7094 computer, minimizes the difficulties in adding plot capabilities to large existing programs. PLOTAN is used in conjunction with a binary tape writing routine and has the ability to plot any variable on the intermediate binary tape as a function of any other.

  18. A fast contour descriptor algorithm for supernova imageclassification

    SciTech Connect

    Aragon, Cecilia R.; Aragon, David Bradburn

    2006-07-16

    We describe a fast contour descriptor algorithm and its application to a distributed supernova detection system (the Nearby Supernova Factory) that processes 600,000 candidate objects in 80 GB of image data per night. Our shape-detection algorithm reduced the number of false positives generated by the supernova search pipeline by 41% while producing no measurable impact on running time. Fourier descriptors are an established method of numerically describing the shapes of object contours, but transform-based techniques are ordinarily avoided in this type of application due to their computational cost. We devised a fast contour descriptor implementation for supernova candidates that meets the tight processing budget of the application. Using the lowest-order descriptors (F{sub 1} and F{sub -1}) and the total variance in the contour, we obtain one feature representing the eccentricity of the object and another denoting its irregularity. Because the number of Fourier terms to be calculated is fixed and small, the algorithm runs in linear time, rather than the O(n log n) time of an FFT. Constraints on object size allow further optimizations so that the total cost of producing the required contour descriptors is about 4n addition/subtraction operations, where n is the length of the contour.

  19. Application Of Moire Contour Fringes To Study Nycticebus Coucany

    NASA Astrophysics Data System (ADS)

    Ren-xiang, Zhang; Ming, Lu; Zu-yun, Lan; Wen-ji, Qu

    1984-12-01

    In this paper we have studied the moire contour fringes of the skull and femur knee joint of Nycticebus coucany and obtained the following results: 1. The skull's value K is very useful for comparative study with the different kinds of Primate. 2. The moire contour fringes of the tibia facies of knee joint is convex on one side while the other side is concave. 3. At the same condition the grade of the first moire contour fringe of connection on the femur knee joint between the two condyles and its angle β are smaller than Hylobates concolor leucongeuys. This study is significant, because: 1. The evolution of skull may be related with the increased value K. 2. The moire contour fringes of the Nycticebus coucany's tibia and femur knee joint have lower range of activity. 3. From the moire contour fringes of knee, the Nycticebus coucany and. Hylobates concolor leucongeuys are of one kind. But the moire contour Nycticebus of tibia is different form.

  20. Differential Cytochrome P450 2D Metabolism Alters Tafenoquine Pharmacokinetics

    PubMed Central

    Vuong, Chau; Xie, Lisa H.; Potter, Brittney M. J.; Zhang, Jing; Zhang, Ping; Duan, Dehui; Nolan, Christina K.; Sciotti, Richard J.; Zottig, Victor E.; Nanayakkara, N. P. Dhammika; Tekwani, Babu L.; Walker, Larry A.; Smith, Philip L.; Paris, Robert M.; Read, Lisa T.; Li, Qigui; Pybus, Brandon S.; Sousa, Jason C.; Reichard, Gregory A.; Smith, Bryan

    2015-01-01

    Cytochrome P450 (CYP) 2D metabolism is required for the liver-stage antimalarial efficacy of the 8-aminoquinoline molecule tafenoquine in mice. This could be problematic for Plasmodium vivax radical cure, as the human CYP 2D ortholog (2D6) is highly polymorphic. Diminished CYP 2D6 enzyme activity, as in the poor-metabolizer phenotype, could compromise radical curative efficacy in humans. Despite the importance of CYP 2D metabolism for tafenoquine liver-stage efficacy, the exact role that CYP 2D metabolism plays in the metabolism and pharmacokinetics of tafenoquine and other 8-aminoquinoline molecules has not been extensively studied. In this study, a series of tafenoquine pharmacokinetic experiments were conducted in mice with different CYP 2D metabolism statuses, including wild-type (WT) (reflecting extensive metabolizers for CYP 2D6 substrates) and CYPmouse 2D knockout (KO) (reflecting poor metabolizers for CYP 2D6 substrates) mice. Plasma and liver pharmacokinetic profiles from a single 20-mg/kg of body weight dose of tafenoquine differed between the strains; however, the differences were less striking than previous results obtained for primaquine in the same model. Additionally, the presence of a 5,6-ortho-quinone tafenoquine metabolite was examined in both mouse strains. The 5,6-ortho-quinone species of tafenoquine was observed, and concentrations of the metabolite were highest in the WT extensive-metabolizer phenotype. Altogether, this study indicates that CYP 2D metabolism in mice affects tafenoquine pharmacokinetics and could have implications for human tafenoquine pharmacokinetics in polymorphic CYP 2D6 human populations. PMID:25870069

  1. A possible analogy between contours in mathematics--as exemplified by Cauchy's integral formula--and contours in the arts.

    PubMed

    Gerr, S

    1982-01-01

    An attempt is made to draw an analogy between contour drawing and a particular mathematical theorem. The analogy is seen to depend on the fact that both methods use definite values along a contour to imply a totality of values within the contour; thus, the use of a part to suggest the whole, by way of a hypothetical 'gestalt-like integration' in the case of the art contour, and the usual process of mathematical integration in the case of Cauchy's formula. Examples illustrating the analogy are drawn from a wide range of artistic work: a modern American drawing, a Cro-Magnon cave painting, and two Chinese works. The traditional Chinese philosophy of painting is invoked in support of the analogy because of its explicit emphasis on the primacy of outline drawing in Chinese painting. Some speculations are offered on further development and application of the analogy. PMID:7182805

  2. Modeling and Control of 2-D Grasping of an Object with Arbitrary Shape under Rolling Contact

    NASA Astrophysics Data System (ADS)

    Arimoto, Suguru; Yoshida, Morio; Sekimoto, Masahiro; Tahara, Kenji

    Modeling, control, and stabilization of dynamics of two-dimensional object grasping by using a pair of multi-joint robot fingers are investigated under rolling contact constraints and an arbitrary geometry of the object and fingertips. First, a fundamental testbed problem of modeling and control of rolling motion between 2-D rigid bodies with an arbitrary shape is treated under the assumption that the two contour curves coincide at the contact point and share the same tangent. The rolling constraint induces the Euler equation of motion that is parameterized by a common arclength parameter and constrained onto the kernel space orthogonally complemented to the image space spanned from the constraint gradient. By extending the analysis to the problem of stable grasp of a 2-D object with an arbitrary shape by a pair of robot fingers, the Euler-Lagrange equation of motion of the overall fingers/object system parametrized by arclength parameters is derived, together with a couple of first-order differential equations that express evolutions of contact points in terms of the second fundamental form. It is shown that 2-D rolling constraints are integrable in the sense of Frobonius even if their Pfaffian forms are characterized by arclength parameters. A control signal called “blind grasping” is introduced and shown to be effective in stabilization of grasping without using the details of the object shape and parameters or external sensing. An extension of the Dirichlet-Lagrange stability theorem to a class of systems with DOF-redundancy under constraints is suggested by using a Morse-Bott-Lyapunov function.

  3. A Geometric Boolean Library for 2D Objects

    2006-01-05

    The 2D Boolean Library is a collection of C++ classes -- which primarily represent 2D geometric data and relationships, and routines -- which contain algorithms for 2D geometric Boolean operations and utility functions. Classes are provided for 2D points, lines, arcs, edgeuses, loops, surfaces and mask sets. Routines are provided that incorporate the Boolean operations Union(OR), XOR, Intersection and Difference. Various analytical geometry routines and routines for importing and exporting the data in various filemore » formats, are also provided in the library.« less

  4. A Geometric Boolean Library for 2D Objects

    SciTech Connect

    McBride, Corey L.; Yarberry, Victor; Jorgensen, Craig

    2006-01-05

    The 2D Boolean Library is a collection of C++ classes -- which primarily represent 2D geometric data and relationships, and routines -- which contain algorithms for 2D geometric Boolean operations and utility functions. Classes are provided for 2D points, lines, arcs, edgeuses, loops, surfaces and mask sets. Routines are provided that incorporate the Boolean operations Union(OR), XOR, Intersection and Difference. Various analytical geometry routines and routines for importing and exporting the data in various file formats, are also provided in the library.

  5. AnisWave2D: User's Guide to the 2d Anisotropic Finite-DifferenceCode

    SciTech Connect

    Toomey, Aoife

    2005-01-06

    This document describes a parallel finite-difference code for modeling wave propagation in 2D, fully anisotropic materials. The code utilizes a mesh refinement scheme to improve computational efficiency. Mesh refinement allows the grid spacing to be tailored to the velocity model, so that fine grid spacing can be used in low velocity zones where the seismic wavelength is short, and coarse grid spacing can be used in zones with higher material velocities. Over-sampling of the seismic wavefield in high velocity zones is therefore avoided. The code has been implemented to run in parallel over multiple processors and allows large-scale models and models with large velocity contrasts to be simulated with ease.

  6. Klassifikation von Standardebenen in der 2D-Echokardiographie mittels 2D-3D-Bildregistrierung

    NASA Astrophysics Data System (ADS)

    Bergmeir, Christoph; Subramanian, Navneeth

    Zum Zweck der Entwicklung eines Systems, das einen unerfahrenen Anwender von Ultraschall (US) zur Aufnahme relevanter anatomischer Strukturen leitet, untersuchen wir die Machbarkeit von 2D-US zu 3D-CT Registrierung. Wir verwenden US-Aufnahmen von Standardebenen des Herzens, welche zu einem 3D-CT-Modell registriert werden. Unser Algorithmus unterzieht sowohl die US-Bilder als auch den CT-Datensatz Vorverarbeitungsschritten, welche die Daten durch Segmentierung auf wesentliche Informationen in Form von Labein für Muskel und Blut reduzieren. Anschließend werden diese Label zur Registrierung mittels der Match-Cardinality-Metrik genutzt. Durch mehrmaliges Registrieren mit verschiedenen Initialisierungen ermitteln wir die im US-Bild sichtbare Standardebene. Wir evaluierten die Methode auf sieben US-Bildern von Standardebenen. Fünf davon wurden korrekt zugeordnet.

  7. Spectral sensitivities for illusory contour perception: a manifold linkage of chromatic and achromatic cues with the generation of contours.

    PubMed

    Takahashi, S; Kaihara, T; Takemoto, A; Ido, K; Ejima, Y

    1992-09-01

    Using colored inducing patterns presented as increments upon a white uniform background, the increment thresholds needed for illusory contour perception were measured as a function of the wavelength of inducing pattern. The spectral sensitivity functions were obtained with varying adaptation level and stimulus configuration, high and low background illumination, and line-based and figure-based inducing patterns. The results showed a distinctive feature between the line-based and the figure-based illusory contours. The sensitivity functions for the line-based illusory contours showed the characteristics of non-opponent mechanisms and they were shape invariant with background intensity and spatial variables. On the other hand, the sensitivity functions for the figure-based illusory contours showed non-opponent nature for low background illumination but opponent nature for high background illumination. It is suggested that the generation of illusory contours involves concurrent processing of different cues of luminance and color, and that photopic adaptation level and stimulus configuration control the degree of the contributions of chromatic and achromatic mechanisms to contour formation. PMID:1455742

  8. [I have tested for you. The contour tonometer. IOP analysis using "Dynamic Contour Tonometry"].

    PubMed

    Lachkar, Y

    2006-05-01

    The Pascal tonometer, or the Dynamic Contour Tonometer (DCT) (Swiss Microtechnology, Zurich) is a device that differs from the Goldmann applanation tonometer (GAT) in its IOP sensor at the center of the cone that measures pressure by a means less dependent on corneal structure. The efficacy of this device in measuring IOP after LASIK surgery has been demonstrated. It can be used to obtain more precise IOP measurements in glaucoma patients or ocular hypertension in cases where the measurement is debatable because of a very thin or very thick cornea. We studied the relations between the measurements with the two devices on thin, normal, and thick corneas. The Pascal tonometer generally showed a good correlation with the Goldmann applanation tonometer, but the limits of agreement are wide. For thin corneas, this device seems more reliable than the GAT, but for thick corneas, no difference was found between the two methods. PMID:17072219

  9. Development of plotting position for the general extreme value distribution

    NASA Astrophysics Data System (ADS)

    Kim, Sooyoung; Shin, Hongjoon; Joo, Kyoungwon; Heo, Jun-Haeng

    2012-12-01

    SummaryProbability plotting positions are used to graphically display the annual maximum rainfall or flood and to estimate the exceedance probabilities of those values. Therefore, the graphical approach using plotting positions has been applied in many hydrology and water resource engineering fields. The definition of unbiased plotting positions by Cunnane (1978) as the mean of the order statistics from reduced variates has influenced researchers to develop the plotting position of the probability distribution containing shape parameters. In this study, the plotting position formula for the general extreme value (GEV) distribution was derived by using the theoretical reduced variates of the GEV distribution for various sample sizes and shape parameters. To choose an appropriate plotting position formula, we examined eight plotting position formula types containing coefficients of skewness or squared coefficients of skewness in the numerator and/or denominator. In addition, the parameters of the plotting position formula for the GEV distribution were estimated by using a genetic optimization method known as the real-coded genetic algorithm (RGA). The accuracy of the derived plotting position formula for the GEV distribution was examined on the basis of the root mean square errors and relative bias between the theoretical reduced variates and those calculated from the derived and existing plotting position formulas. The derived plotting formula was found to be useful if the range of the shape parameter was within ±0.2.

  10. Translational research: from pot to plot.

    PubMed

    Nelissen, Hilde; Moloney, Maurice; Inzé, Dirk

    2014-04-01

    Plant molecular biology has been the key driver to elucidate molecular pathways underlying plant growth, development and stress responses during the past decades. Although this has led to a plethora of available data, the translation to crop improvement is lagging behind. Here, we argue that plant scientists should become more involved in converting basic knowledge into applications in crops to sustainably support food security and agriculture. As the translatability from model species to crops is rather poor, this kind of translational research requires diligence and a thorough knowledge of the investigated trait in the crop. In addition, the robustness of a trait depends on the genotype and environmental conditions, demanding a holistic approach, which cannot always be evaluated under growth chamber and greenhouse conditions. To date, the improved resolution of many genome-wide technologies and the emerging expertise in canopy imaging, plant phenotyping and field monitoring make it very timely to move from the pathway specifics to important agronomical realizations, thus from pot to plot. Despite the availability of scientific know-how and expertise, the translation of new traits to applications using a transgene approach is in some regions of the world, such as Europe, seriously hampered by heavy and nontranslucent legislation for biotech crops. Nevertheless, progress in crop improvement will remain highly dependent on our ability to evaluate improved varieties in field conditions. Here, we plead for a network of protected sites for field trials across the different European climates to test improved biotech traits directly in crops. PMID:24646295

  11. PHENIX (Pioneering High Energy Nuclear Interaction eXperiment) Data Plots from the PHENIX Plot Database

    DOE Data Explorer

    The PHENIX Experiment is the largest of the four experiments currently taking data at the Relativistic Heavy Ion Collider. PHENIX, the Pioneering High Energy Nuclear Interaction eXperiment, is an exploratory experiment for the investigation of high energy collisions of heavy ions and protons. PHENIX is designed specifically to measure direct probes of the collisions such as electrons, muons, and photons.The primary goal of PHENIX is to discover and study a new state of matter called the Quark-Gluon Plasma.[From http://www.phenix.bnl.gov/phenix/WWW/intro/] The PHENIX plot database allows searching by collision species, energies of the X and Y axis, and specific runs. Figures and data plots from published PHENIX papers are also available at http://www.phenix.bnl.gov//WWW/talk/pub_papers.php. (Specialized Interface)

  12. Functional characterization of CYP2D6 enhancer polymorphisms

    PubMed Central

    Wang, Danxin; Papp, Audrey C.; Sun, Xiaochun

    2015-01-01

    CYP2D6 metabolizes nearly 25% of clinically used drugs. Genetic polymorphisms cause large inter-individual variability in CYP2D6 enzyme activity and are currently used as biomarker to predict CYP2D6 metabolizer phenotype. Previously, we had identified a region 115 kb downstream of CYP2D6 as enhancer for CYP2D6, containing two completely linked single nucleotide polymorphisms (SNPs), rs133333 and rs5758550, associated with enhanced transcription. However, the enhancer effect on CYP2D6 expression, and the causative variant, remained to be ascertained. To characterize the CYP2D6 enhancer element, we applied chromatin conformation capture combined with the next-generation sequencing (4C assays) and chromatin immunoprecipitation with P300 antibody, in HepG2 and human primary culture hepatocytes. The results confirmed the role of the previously identified enhancer region in CYP2D6 expression, expanding the number of candidate variants to three highly linked SNPs (rs133333, rs5758550 and rs4822082). Among these, only rs5758550 demonstrated regulating enhancer activity in a reporter gene assay. Use of clustered regularly interspaced short palindromic repeats mediated genome editing in HepG2 cells targeting suspected enhancer regions decreased CYP2D6 mRNA expression by 70%, only upon deletion of the rs5758550 region. These results demonstrate robust effects of both the enhancer element and SNP rs5758550 on CYP2D6 expression, supporting consideration of rs5758550 for CYP2D6 genotyping panels to yield more accurate phenotype prediction. PMID:25381333

  13. Locating sources of hazardous gas emissions using dual pollution rose plots and open path Fourier transform infrared spectroscopy.

    PubMed

    Sung, Lung-Yu; Shie, Ruei-Hou; Lu, Chia-Jung

    2014-01-30

    A new approach employing two pollution rose plots to locate the sources of multiple hazardous gas emissions was proposed and tested in an industrial area. The data used for constructing the pollution rose plots were obtained from two side-by-side measurements of open-path Fourier Transform Infrared (OP-FTIR) spectrometers during one week of continuous analysis on the rooftop of a semiconductor plant. Hazardous gases such as CF4, C2F6, CH3OH, NH3, NO2, and SF6 were found and quantified at the ppb level by both OP-FTIR measurement sites. The data of the top 20% highest concentrations and associated wind directions were used to construct the pollution rose plots. Pollution source probability contours for each compound were constructed using the probability-product of directional probability from two pollution rose plots. Hot spots for SF6, CF4, NO2, and C2F6 pointed to the stack area of the plant, but the sources of CH3OH and NH3 were found outside of this plant. The influences of parameters for this approach such as the variation in wind direction, lower limit concentration threshold and the nearby buildings were discussed. PMID:24333712

  14. An Incompressible 2D Didactic Model with Singularity and Explicit Solutions of the 2D Boussinesq Equations

    NASA Astrophysics Data System (ADS)

    Chae, Dongho; Constantin, Peter; Wu, Jiahong

    2014-09-01

    We give an example of a well posed, finite energy, 2D incompressible active scalar equation with the same scaling as the surface quasi-geostrophic equation and prove that it can produce finite time singularities. In spite of its simplicity, this seems to be the first such example. Further, we construct explicit solutions of the 2D Boussinesq equations whose gradients grow exponentially in time for all time. In addition, we introduce a variant of the 2D Boussinesq equations which is perhaps a more faithful companion of the 3D axisymmetric Euler equations than the usual 2D Boussinesq equations.

  15. iCanPlot: visual exploration of high-throughput omics data using interactive Canvas plotting.

    PubMed

    Sinha, Amit U; Armstrong, Scott A

    2012-01-01

    Increasing use of high throughput genomic scale assays requires effective visualization and analysis techniques to facilitate data interpretation. Moreover, existing tools often require programming skills, which discourages bench scientists from examining their own data. We have created iCanPlot, a compelling platform for visual data exploration based on the latest technologies. Using the recently adopted HTML5 Canvas element, we have developed a highly interactive tool to visualize tabular data and identify interesting patterns in an intuitive fashion without the need of any specialized computing skills. A module for geneset overlap analysis has been implemented on the Google App Engine platform: when the user selects a region of interest in the plot, the genes in the region are analyzed on the fly. The visualization and analysis are amalgamated for a seamless experience. Further, users can easily upload their data for analysis--which also makes it simple to share the analysis with collaborators. We illustrate the power of iCanPlot by showing an example of how it can be used to interpret histone modifications in the context of gene expression. PMID:22393367

  16. Assessment of carotid diameter and wall thickness in ultrasound images using active contours improved by a multiresolution technique

    NASA Astrophysics Data System (ADS)

    Gutierrez, Marco A.; Pilon, Paulo E.; Lage, Silvia G.; Kopel, Liliane; Carvalho, Ricardo T.; Furuie, Sergio S.

    2002-04-01

    Carotid vessel ultrasound imaging is a reliable non-invasive technique to measure the arterial morphology. Vessel diameter, intima-media thickness (IMT) of the far wall and plaque presence can be reliably determined using B-mode ultrasound. In this paper we describe a semi-automatic approach to measure artery diameter and IMT based on an active contour technique improved by a multiresolution analysis. The operator selects a region-of-interest (ROI) in a series of carotid images obtained from B-mode ultrasound. This set of images is convolved with the corresponding partial derivatives of the Gaussian filter. The filter response is used to compute a 2D gradient magnitude image in order to refine the vessel's boundaries. Using an active contour technique the vessel's border is determined automatically. The near wall media-adventitia (NWMA), far wall media-adventitia (FWMA) and far wall lumen-intima (FWLI) borders are obtained by a least-square fitting of the active contours result. The distance between NWMA and FWLI (vessel diameter) and between FWLI and FWMA (far wall intima-media thickness) are obtained for all images and the mean value is computed during systole and diastole. The proposed method is a reliable and reproducible way of assessing the vessel diameter and far wall intima-media thickness of the carotid artery.

  17. Efficient Visible Quasi-2D Perovskite Light-Emitting Diodes.

    PubMed

    Byun, Jinwoo; Cho, Himchan; Wolf, Christoph; Jang, Mi; Sadhanala, Aditya; Friend, Richard H; Yang, Hoichang; Lee, Tae-Woo

    2016-09-01

    Efficient quasi-2D-structure perovskite light-emitting diodes (4.90 cd A(-1) ) are demonstrated by mixing a 3D-structured perovskite material (methyl ammonium lead bromide) and a 2D-structured perovskite material (phenylethyl ammonium lead bromide), which can be ascribed to better film uniformity, enhanced exciton confinement, and reduced trap density. PMID:27334788

  18. Integrating Mobile Multimedia into Textbooks: 2D Barcodes

    ERIC Educational Resources Information Center

    Uluyol, Celebi; Agca, R. Kagan

    2012-01-01

    The major goal of this study was to empirically compare text-plus-mobile phone learning using an integrated 2D barcode tag in a printed text with three other conditions described in multimedia learning theory. The method examined in the study involved modifications of the instructional material such that: a 2D barcode was used near the text, the…

  19. Van der Waals stacked 2D layered materials for optoelectronics

    NASA Astrophysics Data System (ADS)

    Zhang, Wenjing; Wang, Qixing; Chen, Yu; Wang, Zhuo; Wee, Andrew T. S.

    2016-06-01

    The band gaps of many atomically thin 2D layered materials such as graphene, black phosphorus, monolayer semiconducting transition metal dichalcogenides and hBN range from 0 to 6 eV. These isolated atomic planes can be reassembled into hybrid heterostructures made layer by layer in a precisely chosen sequence. Thus, the electronic properties of 2D materials can be engineered by van der Waals stacking, and the interlayer coupling can be tuned, which opens up avenues for creating new material systems with rich functionalities and novel physical properties. Early studies suggest that van der Waals stacked 2D materials work exceptionally well, dramatically enriching the optoelectronics applications of 2D materials. Here we review recent progress in van der Waals stacked 2D materials, and discuss their potential applications in optoelectronics.

  20. Unitary quantum lattice gas representation of 2D quantum turbulence

    NASA Astrophysics Data System (ADS)

    Zhang, Bo; Vahala, George; Vahala, Linda; Soe, Min

    2011-05-01

    Quantum vortex structures and energy cascades are examined for two dimensional quantum turbulence (2D QT) using a special unitary evolution algorithm. The qubit lattice gas (QLG) algorithm, is employed to simulate the weakly-coupled Bose-Einstein condensate (BEC) governed by the Gross-Pitaevskii (GP) equation. A parameter regime is uncovered in which, as in 3D QT, there is a very short Poincare recurrence time. This short recurrence time is destroyed as the nonlinear interaction energy is increased. Energy cascades for 2D QT are considered to examine whether 2D QT exhibits the inverse cascades of 2D classical turbulence. In the parameter regime considered, the spectra analysis reveals no such dual cascades---dual cascades being a hallmark of 2D classical turbulence.

  1. CYP2D6 polymorphism in patients with eating disorders.

    PubMed

    Peñas-Lledó, E M; Dorado, P; Agüera, Z; Gratacós, M; Estivill, X; Fernández-Aranda, F; Llerena, A

    2012-04-01

    CYP2D6 polymorphism is associated with variability in drug response, endogenous metabolism (that is, serotonin), personality, neurocognition and psychopathology. The relationship between CYP2D6 genetic polymorphism and the risk of eating disorders (ED) was analyzed in 267 patients with ED and in 285 controls. A difference in the CYP2D6 active allele distribution was found between these groups. Women carrying more than two active genes (ultrarapid metabolizers) (7.5 vs 4.6%) or two (67 vs 58.9%) active genes were more frequent among patients with ED, whereas those with one (20.6 vs 30.2%) or zero active genes (4.9 vs 6.3%) were more frequent among controls (P<0.05). Although further research is needed, present findings suggest an association between CYP2D6 and ED. CYP2D6 allele distribution in patients with ED seems related to increased enzyme activity. PMID:20877302

  2. 2D materials and van der Waals heterostructures.

    PubMed

    Novoselov, K S; Mishchenko, A; Carvalho, A; Castro Neto, A H

    2016-07-29

    The physics of two-dimensional (2D) materials and heterostructures based on such crystals has been developing extremely fast. With these new materials, truly 2D physics has begun to appear (for instance, the absence of long-range order, 2D excitons, commensurate-incommensurate transition, etc.). Novel heterostructure devices--such as tunneling transistors, resonant tunneling diodes, and light-emitting diodes--are also starting to emerge. Composed from individual 2D crystals, such devices use the properties of those materials to create functionalities that are not accessible in other heterostructures. Here we review the properties of novel 2D crystals and examine how their properties are used in new heterostructure devices. PMID:27471306

  3. Assessing 3D tunnel position in ACL reconstruction using a novel single image 3D-2D registration

    NASA Astrophysics Data System (ADS)

    Kang, X.; Yau, W. P.; Otake, Y.; Cheung, P. Y. S.; Hu, Y.; Taylor, R. H.

    2012-02-01

    The routinely used procedure for evaluating tunnel positions following anterior cruciate ligament (ACL) reconstructions based on standard X-ray images is known to pose difficulties in terms of obtaining accurate measures, especially in providing three-dimensional tunnel positions. This is largely due to the variability in individual knee joint pose relative to X-ray plates. Accurate results were reported using postoperative CT. However, its extensive usage in clinical routine is hampered by its major requirement of having CT scans of individual patients, which is not available for most ACL reconstructions. These difficulties are addressed through the proposed method, which aligns a knee model to X-ray images using our novel single-image 3D-2D registration method and then estimates the 3D tunnel position. In the proposed method, the alignment is achieved by using a novel contour-based 3D-2D registration method wherein image contours are treated as a set of oriented points. However, instead of using some form of orientation weighting function and multiplying it with a distance function, we formulate the 3D-2D registration as a probability density estimation using a mixture of von Mises-Fisher-Gaussian (vMFG) distributions and solve it through an expectation maximization (EM) algorithm. Compared with the ground-truth established from postoperative CT, our registration method in an experiment using a plastic phantom showed accurate results with errors of (-0.43°+/-1.19°, 0.45°+/-2.17°, 0.23°+/-1.05°) and (0.03+/-0.55, -0.03+/-0.54, -2.73+/-1.64) mm. As for the entry point of the ACL tunnel, one of the key measurements, it was obtained with high accuracy of 0.53+/-0.30 mm distance errors.

  4. Random forest learning of ultrasonic statistical physics and object spaces for lesion detection in 2D sonomammography

    NASA Astrophysics Data System (ADS)

    Sheet, Debdoot; Karamalis, Athanasios; Kraft, Silvan; Noël, Peter B.; Vag, Tibor; Sadhu, Anup; Katouzian, Amin; Navab, Nassir; Chatterjee, Jyotirmoy; Ray, Ajoy K.

    2013-03-01

    Breast cancer is the most common form of cancer in women. Early diagnosis can significantly improve lifeexpectancy and allow different treatment options. Clinicians favor 2D ultrasonography for breast tissue abnormality screening due to high sensitivity and specificity compared to competing technologies. However, inter- and intra-observer variability in visual assessment and reporting of lesions often handicaps its performance. Existing Computer Assisted Diagnosis (CAD) systems though being able to detect solid lesions are often restricted in performance. These restrictions are inability to (1) detect lesion of multiple sizes and shapes, and (2) differentiate between hypo-echoic lesions from their posterior acoustic shadowing. In this work we present a completely automatic system for detection and segmentation of breast lesions in 2D ultrasound images. We employ random forests for learning of tissue specific primal to discriminate breast lesions from surrounding normal tissues. This enables it to detect lesions of multiple shapes and sizes, as well as discriminate between hypo-echoic lesion from associated posterior acoustic shadowing. The primal comprises of (i) multiscale estimated ultrasonic statistical physics and (ii) scale-space characteristics. The random forest learns lesion vs. background primal from a database of 2D ultrasound images with labeled lesions. For segmentation, the posterior probabilities of lesion pixels estimated by the learnt random forest are hard thresholded to provide a random walks segmentation stage with starting seeds. Our method achieves detection with 99.19% accuracy and segmentation with mean contour-to-contour error < 3 pixels on a set of 40 images with 49 lesions.

  5. Two-dimensional mass defect matrix plots for mapping genealogical links in mixtures of lignin depolymerisation products.

    PubMed

    Qi, Yulin; Hempelmann, Rolf; Volmer, Dietrich A

    2016-07-01

    Lignin is the second most abundant natural biopolymer, and lignin wastes are therefore potentially significant sources for renewable chemicals such as fuel compounds, as alternatives to fossil fuels. Waste valorisation of lignin is currently limited to a few applications such as in the pulp industry, however, because of the lack of effective extraction and characterisation methods for the chemically highly complex mixtures after decomposition. Here, we have implemented high resolution mass spectrometry and developed two-dimensional mass defect matrix plots as a data visualisation tool, similar to the Kendrick mass defect plots implemented in fields such as petroleomics. These 2D matrix plots greatly simplified the highly convoluted lignin mass spectral data acquired from Fourier transform ion cyclotron resonance (FTICR)-mass spectrometry, and the derived metrics provided confident peak assignments and strongly improved structural mapping of lignin decomposition product series from the various linkages within the lignin polymer after electrochemical decomposition. Graphical Abstract 2D mass defect matrix plot for a lignin sample after decomposition. PMID:27178557

  6. Storytelling in Earth sciences: The eight basic plots

    NASA Astrophysics Data System (ADS)

    Phillips, Jonathan

    2012-11-01

    Reporting results and promoting ideas in science in general, and Earth science in particular, is treated here as storytelling. Just as in literature and drama, storytelling in Earth science is characterized by a small number of basic plots. Though the list is not exhaustive, and acknowledging that multiple or hybrid plots and subplots are possible in a single piece, eight standard plots are identified, and examples provided: cause-and-effect, genesis, emergence, destruction, metamorphosis, convergence, divergence, and oscillation. The plots of Earth science stories are not those of literary traditions, nor those of persuasion or moral philosophy, and deserve separate consideration. Earth science plots do not conform those of storytelling more generally, implying that Earth scientists may have fundamentally different motivations than other storytellers, and that the basic plots of Earth Science derive from the characteristics and behaviors of Earth systems. In some cases preference or affinity to different plots results in fundamentally different interpretations and conclusions of the same evidence. In other situations exploration of additional plots could help resolve scientific controversies. Thus explicit acknowledgement of plots can yield direct scientific benefits. Consideration of plots and storytelling devices may also assist in the interpretation of published work, and can help scientists improve their own storytelling.

  7. Atmospheric Radiation Measurement (ARM) Data Plots and Figures

    DOE Data Explorer

    ARM Program data is available in daily diagnostic plots that can be easily grouped into daily, weekly, monthly, and even yearly increments. By visualizing ARM data in thumbnail-sized data plots, users experience highly-browsable subsets of data available at the Data Archive including complimentary data products derived from data processed by ARM. These thumbnails allow users to quickly scan for a particular type of condition, like a clear day or a day with persistent cirrus. From a diagnostics perspective, the data plots assist in looking for missing data, for data exceeding a particular range, or for loading multiple variables (e.g., shortwave fluxes and precipitation), and to determine whether a certain science or data quality condition is associated with some other parameter (e.g., high wind or rain).[taken from http://www.arm.gov/data/data_plots.stm] Several interfaces and tools have been developed to make data plots easy to generate and manipulate. For example, the NCVWeb is an interactive NetCDF data plotting tool that ARM users can use to plot data as they order it or to plot regular standing data orders. It allows production of detailed tables, extraction of data, statistics output, comparison plotting, etc. without the need for separate visualization software. Users will be requested to create a password, but the data plots are free for viewing and downloading.

  8. Research of Active Contour Model in Aerial Images

    NASA Astrophysics Data System (ADS)

    Kun, Wang; Li, Guo

    With the development of computer and aviation technology, the aerial image is facing an important issue is how to automate, including aerial images of the automatic extraction of the target. In this paper, the issue of aerial images to study the active contour model is introduced, that is, Snake model, to achieve the target aerial image of the semi-automatic contour extraction method. Snake model used the unique characteristic of the energy minimization, carried out on the image contour extraction, to obtain a clear, consistent and accurate image contour. The model is defined through the energy minimization of the function, given in the initial position of artificial circumstances, through the iterative calculation of Snake model will eventually form the minimum energy function has been described in the outline of the target partition. The results indicate that Snake model for aerial images of the edge contour extraction, verification, concluded that the Snake-based edge detection methods could be more objectively and accurately extract the edge of the outline of aerial images.

  9. Automated optic disk boundary detection by modified active contour model.

    PubMed

    Xu, Juan; Chutatape, Opas; Chew, Paul

    2007-03-01

    This paper presents a novel deformable-model-based algorithm for fully automated detection of optic disk boundary in fundus images. The proposed method improves and extends the original snake (deforming-only technique) in two aspects: clustering and smoothing update. The contour points are first self-separated into edge-point group or uncertain-point group by clustering after each deformation, and these contour points are then updated by different criteria based on different groups. The updating process combines both the local and global information of the contour to achieve the balance of contour stability and accuracy. The modifications make the proposed algorithm more accurate and robust to blood vessel occlusions, noises, ill-defined edges and fuzzy contour shapes. The comparative results show that the proposed method can estimate the disk boundaries of 100 test images closer to the groundtruth, as measured by mean distance to closest point (MDCP) <3 pixels, with the better success rate when compared to those obtained by gradient vector flow snake (GVF-snake) and modified active shape models (ASM). PMID:17355059

  10. Principles of contour information: Reply to Lim and Leek (2012).

    PubMed

    Singh, Manish; Feldman, Jacob

    2012-07-01

    Lim and Leek (2012) presented a formalization of information along object contours, which they argued was an alternative to the approach taken in our article (Feldman & Singh, 2005). Here, we summarize the 2 approaches, showing that--notwithstanding Lim and Leek's (2012) critical rhetoric--their approach is substantially identical to ours, except for the technical details of the formalism. Following the logic of our article point by point, Lim and Leek (a) defined probabilistic expectations about the geometry of smooth contours (which they based on differential contour geometry, while we used a discrete approximation--the only essential difference in their approach), (b) assumed that information along the contour was proportional to the negative logarithm of probability, following standard information theory, and then (c) extended this formulation to closed contours. We analyze what they described as errors in our approach, all of which rest on mathematical misunderstandings or bizarre misreadings of our article. We also show that their extension to 3-dimensional surfaces and their "modified minima rule" contain fatal deficiencies. PMID:22775501

  11. Incorporating Stream Features into Groundwater Contouring Tools Within GIS.

    PubMed

    Bannister, Roger; Kennelly, Patrick

    2016-03-01

    Hydrogeologists often are called upon to estimate surfaces from discrete, sparse data points. This estimation is often accomplished by manually drawing contours on maps using interpolation methods between points of known value while accounting for features known to influence the water table's surface. By contrast, geographic information systems (GIS) are good at creating smooth continuous surfaces from limited data points and allowing the user to represent the resulting surface resulting with contours, but these automated methods often fail to meet the expectations of many hydrogeologists because they do not include knowledge of other influences on the water table. In this study, we seek to fill this gap in the GIS-based methodology for hydrogeologists through an interactive tool that shapes an interpolated surface based on additional knowledge of the water table inferred from gaining or losing streams. The modified surface is reflected in water table contours that, for example, "V" upstream for gaining streams, and can be interactively adjusted to fit the user's expectations. By modifying not only the contours but also the associated interpolated surface, additional contours will follow the same trend, and the modified surface can be used for other analyses like calculating average gradients and flow paths. The tool leverages Esri's ArcGIS Desktop software, building upon a robust suite of mapping tools. We see this as a prototype for other tools that could be developed for hydrogeologists to account for variations in the water table inferred from local topographic trends, pumping or injection wells, and other hydrogeologic features. PMID:25810357

  12. Infants' perception of subjective contours from apparent motion.

    PubMed

    Yamaguchi, Masami K; Kanazawa, So; Okamura, Hiromi

    2008-01-01

    We examined infants' perception of subjective contours in Subjective-Contour-from-Apparent-Motion (SCAM) stimuli [e.g., Cicerone, C. M., Hoffman, D. D., Gowdy, P. D., & Kim, J. S. (1995). The perception of color from motion. Perception & Psychophysics, 57, 761-777] using the preferential looking technique. The SCAM stimulus is composed of random dots which are assigned two different colors. Circular region assigned one color moved apparently, keeping all dots' location unchanged. In the SCAM stimulus, adults can perceive subjective color spreading and subjective contours in apparent motion (http://c-faculty.chuo-u.ac.jp/ approximately ymasa/okamura/ibd_demo.html). In the present study, we conducted two experiments by using this type of SCAM stimulus. A total of thirty-six 3-8-month-olds participated. In experiment 1, we presented two stimuli to the infants side by side: a SCAM stimulus consisting of different luminance, and a non-SCAM stimulus consisting of isoluminance dots. The results indicated that the 5-8-month-olds showed preference for the SCAM stimuli. In experiments 2 and 3, we confirmed that the infants' preference for the SCAM stimulus was not generated by the local difference and local change made by luminance of dots but by the subjective contours. These results suggest that 5-8-month-olds were able to perceive subjective contours in the SCAM stimuli. PMID:17727955

  13. A Vessel Active Contour Model for Vascular Segmentation

    PubMed Central

    Chen, Qingli; Wang, Wei; Peng, Yu; Wang, Qingjun; Wu, Zhongke; Zhou, Mingquan

    2014-01-01

    This paper proposes a vessel active contour model based on local intensity weighting and a vessel vector field. Firstly, the energy function we define is evaluated along the evolving curve instead of all image points, and the function value at each point on the curve is based on the interior and exterior weighted means in a local neighborhood of the point, which is good for dealing with the intensity inhomogeneity. Secondly, a vascular vector field derived from a vesselness measure is employed to guide the contour to evolve along the vessel central skeleton into thin and weak vessels. Thirdly, an automatic initialization method that makes the model converge rapidly is developed, and it avoids repeated trails in conventional local region active contour models. Finally, a speed-up strategy is implemented by labeling the steadily evolved points, and it avoids the repeated computation of these points in the subsequent iterations. Experiments using synthetic and real vessel images validate the proposed model. Comparisons with the localized active contour model, local binary fitting model, and vascular active contour model show that the proposed model is more accurate, efficient, and suitable for extraction of the vessel tree from different medical images. PMID:25101262

  14. A vessel active contour model for vascular segmentation.

    PubMed

    Tian, Yun; Chen, Qingli; Wang, Wei; Peng, Yu; Wang, Qingjun; Duan, Fuqing; Wu, Zhongke; Zhou, Mingquan

    2014-01-01

    This paper proposes a vessel active contour model based on local intensity weighting and a vessel vector field. Firstly, the energy function we define is evaluated along the evolving curve instead of all image points, and the function value at each point on the curve is based on the interior and exterior weighted means in a local neighborhood of the point, which is good for dealing with the intensity inhomogeneity. Secondly, a vascular vector field derived from a vesselness measure is employed to guide the contour to evolve along the vessel central skeleton into thin and weak vessels. Thirdly, an automatic initialization method that makes the model converge rapidly is developed, and it avoids repeated trails in conventional local region active contour models. Finally, a speed-up strategy is implemented by labeling the steadily evolved points, and it avoids the repeated computation of these points in the subsequent iterations. Experiments using synthetic and real vessel images validate the proposed model. Comparisons with the localized active contour model, local binary fitting model, and vascular active contour model show that the proposed model is more accurate, efficient, and suitable for extraction of the vessel tree from different medical images. PMID:25101262

  15. Targeted fluorescence imaging enhanced by 2D materials: a comparison between 2D MoS2 and graphene oxide.

    PubMed

    Xie, Donghao; Ji, Ding-Kun; Zhang, Yue; Cao, Jun; Zheng, Hu; Liu, Lin; Zang, Yi; Li, Jia; Chen, Guo-Rong; James, Tony D; He, Xiao-Peng

    2016-08-01

    Here we demonstrate that 2D MoS2 can enhance the receptor-targeting and imaging ability of a fluorophore-labelled ligand. The 2D MoS2 has an enhanced working concentration range when compared with graphene oxide, resulting in the improved imaging of both cell and tissue samples. PMID:27378648

  16. Split-plot designs for robotic serial dilution assays.

    PubMed

    Buzas, Jeffrey S; Wager, Carrie G; Lansky, David M

    2011-12-01

    This article explores effective implementation of split-plot designs in serial dilution bioassay using robots. We show that the shortest path for a robot to fill plate wells for a split-plot design is equivalent to the shortest common supersequence problem in combinatorics. We develop an algorithm for finding the shortest common supersequence, provide an R implementation, and explore the distribution of the number of steps required to implement split-plot designs for bioassay through simulation. We also show how to construct collections of split plots that can be filled in a minimal number of steps, thereby demonstrating that split-plot designs can be implemented with nearly the same effort as strip-plot designs. Finally, we provide guidelines for modeling data that result from these designs. PMID:21627628

  17. Aeroacoustics of contoured plug-nozzle supersonic jet flows

    NASA Technical Reports Server (NTRS)

    Dosanjh, D. S.; Das, I. S.

    1986-01-01

    Experimental investigations of the acoustic far-field, the shock associated noise, and the characteristics of the repetitive shock structure of supersonic jet flows issuing from a plug-nozzle having an externally expanded contoured plug with a pointed termination, operated at a range of supercritical pressure ratios of 2.0 to 4.5 are reported. The supersonic jet flow from the contoured plug is shown to be shock-free and virtually wakeless at a pressure ratio of 3.60 (flow Mach number, 1.49). By comparison with the noise characteristics of underexpanded jet flows from an equivalent convergent nozzle, substantial reductions in the total (mixing and the shock associated) noise levels are obtained when the contoured plug nozzle is operated either in the fully-expanded (shock-free) mode or in the over- and the underexpanded modes.

  18. Performance comparisons of contour-based corner detectors.

    PubMed

    Awrangjeb, Mohammad; Lu, Guojun; Fraser, Clive S

    2012-09-01

    Corner detectors have many applications in computer vision and image identification and retrieval. Contour-based corner detectors directly or indirectly estimate a significance measure (e.g., curvature) on the points of a planar curve, and select the curvature extrema points as corners. While an extensive number of contour-based corner detectors have been proposed over the last four decades, there is no comparative study of recently proposed detectors. This paper is an attempt to fill this gap. The general framework of contour-based corner detection is presented, and two major issues-curve smoothing and curvature estimation, which have major impacts on the corner detection performance, are discussed. A number of promising detectors are compared using both automatic and manual evaluation systems on two large datasets. It is observed that while the detectors using indirect curvature estimation techniques are more robust, the detectors using direct curvature estimation techniques are faster. PMID:22645267

  19. An Investigation of Implicit Active Contours for Scientific Image Segmentation

    SciTech Connect

    Weeratunga, S K; Kamath, C

    2003-10-29

    The use of partial differential equations in image processing has become an active area of research in the last few years. In particular, active contours are being used for image segmentation, either explicitly as snakes, or implicitly through the level set approach. In this paper, we consider the use of the implicit active contour approach for segmenting scientific images of pollen grains obtained using a scanning electron microscope. Our goal is to better understand the pros and cons of these techniques and to compare them with the traditional approaches such as the Canny and SUSAN edge detectors. The preliminary results of our study show that the level set method is computationally expensive and requires the setting of several different parameters. However, it results in closed contours, which may be useful in separating objects from the background in an image.

  20. Method for measuring the contour of a machined part

    DOEpatents

    Bieg, L.F.

    1995-05-30

    A method is disclosed for measuring the contour of a machined part with a contour gage apparatus, having a probe assembly including a probe tip for providing a measure of linear displacement of the tip on the surface of the part. The contour gage apparatus may be moved into and out of position for measuring the part while the part is still carried on the machining apparatus. Relative positions between the part and the probe tip may be changed, and a scanning operation is performed on the machined part by sweeping the part with the probe tip, whereby data points representing linear positions of the probe tip at prescribed rotation intervals in the position changes between the part and the probe tip are recorded. The method further allows real-time adjustment of the apparatus machining the part, including real-time adjustment of the machining apparatus in response to wear of the tool that occurs during machining. 5 figs.