Multiple-well invasion percolation.
Araújo, A D; Romeu, M C; Moreira, A A; Andrade, R F S; Andrade, J S
2008-04-01
When the invasion percolation model is applied as a simplified model for the displacement of a viscous fluid by a less viscous one, the distribution of displaced mass follows two distinct universality classes, depending on the criteria used to stop the displacement. Here we study the distribution of mass for this process, in the case where four extraction wells are placed around a single injection well in the middle of a square lattice. Our analysis considers the limit where the pressure of the extraction well Pe is zero; in other words, an extraction well is capped as soon as less viscous fluid reaches that extraction well. Our results show that, as expected, the probability of stopping the production with small amounts of displaced mass is greatly reduced. We also investigate whether or not creating extra extraction wells is an efficient strategy. We show that the probability of increasing the amount of displaced fluid by adding an extra extraction well depends on the total recovered mass obtained before adding this well. The results presented here could be relevant to determine efficient strategies in oil exploration. PMID:18517620
Modied invasion percolation model for fracking
NASA Astrophysics Data System (ADS)
Norris, J.; Turcotte, D. L.; Rundle, J. B.
2013-12-01
Recent developments in hydraulic fracturing (fracking) have enabled the recovery of large reserves of natural gas and oil. These developments include a change from low-volume, high-viscosity fluid injection to high-volume, low-viscosity injection. We consider new models of Invasion Percolation, (IP) which are models that were originally introduced to represent the injection of an invading fluid into a fluid filled porous medium. A primary difference between our model and the original model is the elimination of any unbroken bonds whose end sites are both filled with fluid. While the original model was found to have statistics nearly identical to traditional percolation, we find significant statistical differences. In particular, the distribution of broken bond strengths displays a strong roll-over near the critical point. Another difference between traditional percolation clusters and clusters generated using our model is the absence of internal loops. The modified growth rule prevents the formation of internal loops making the growing cluster ramified. Other ramified networks include drainage basins and DLA clusters. The study of drainage basins led to the development of Horton-Strahler and Tokunaga network statistics. We used both Horton-Strahler and Tokunaga network statistics to characterize simulated clusters using and found that the clusters generated by our model are statistically self-similar fractals. In addition to fractal clusters, IP also displays burst dynamics, in which the cluster extends rapidly through a spontaneous extension of percolating bonds. We define a burst to be a consecutive series of broken bonds whose strengths are all below a specified value. Using this definition of bursts we found good agreement with a power-law frequency-area distribution. Our model displays many of the characteristics of an energy landscape, and shows many similarities to DLA, neural networks, ecological landscapes, and the world wide web. We anticipate that this
Modified Invasion Percolation Models for Multiphase Processes
Karpyn, Zuleima
2015-01-31
This project extends current understanding and modeling capabilities of pore-scale multiphase flow physics in porous media. High-resolution X-ray computed tomography imaging experiments are used to investigate structural and surface properties of the medium that influence immiscible displacement. Using experimental and computational tools, we investigate the impact of wetting characteristics, as well as radial and axial loading conditions, on the development of percolation pathways, residual phase trapping and fluid-fluid interfacial areas.
Invasion percolation between two wells in continuous media
NASA Astrophysics Data System (ADS)
Lee, Sang Bub
2016-03-01
Invasion percolation between two wells was studied in continuous media consisted of overlapping disks and spheres. The invasion percolation between injection and extraction wells occurs when a fluid injected through the injection well invades less pressurized neighboring pores until it reaches the extraction well. Attention was paid to whether the probability distribution of the invading mass m and the fractal dimension of the clusters of invaded pore particles remain similar to those of the lattice model. Our results indicated that the power α characterizing the probability distribution via P( m) ∝ m - α was considerably larger than that of the lattice model for a reduced volume density η = η c of pore particles, η c being the percolation critical density, and that it converged to the value for the lattice model for p e = 0 as η was increased, where p e is the pressure of an extraction site for the lattice model. The fractal dimension of the invaded clusters was found to be similar to that of the ordinary lattice percolation clusters generated at the percolation threshold. The scaling of the invaded clusters was also examined, and it held in both two and three dimensions.
Cell Invasion in Collagen Scaffold Architectures Characterized by Percolation Theory.
Ashworth, Jennifer C; Mehr, Marco; Buxton, Paul G; Best, Serena M; Cameron, Ruth E
2015-06-24
The relationship between biological scaffold interconnectivity and cell migration is an important but poorly understood factor in tissue regeneration. Here a scale-independent technique for characterization of collagen scaffold interconnectivity is presented, using a combination of X-ray microcomputed tomography and percolation theory. Confocal microscopy of connective tissue cells reveals this technique as highly relevant for determining the extent of cell invasion. PMID:25881025
Loopless nontrapping invasion-percolation model for fracking.
Norris, J Quinn; Turcotte, Donald L; Rundle, John B
2014-02-01
Recent developments in hydraulic fracturing (fracking) have enabled the recovery of large quantities of natural gas and oil from old, low-permeability shales. These developments include a change from low-volume, high-viscosity fluid injection to high-volume, low-viscosity injection. The injected fluid introduces distributed damage that provides fracture permeability for the extraction of the gas and oil. In order to model this process, we utilize a loopless nontrapping invasion percolation previously introduced to model optimal polymers in a strongly disordered medium and for determining minimum energy spanning trees on a lattice. We performed numerical simulations on a two-dimensional square lattice and find significant differences from other percolation models. Additionally, we find that the growing fracture network satisfies both Horton-Strahler and Tokunaga network statistics. As with other invasion percolation models, our model displays burst dynamics, in which the cluster extends rapidly into a connected region. We introduce an alternative definition of bursts to be a consecutive series of opened bonds whose strengths are all below a specified value. Using this definition of bursts, we find good agreement with a power-law frequency-area distribution. These results are generally consistent with the observed distribution of microseismicity observed during a high-volume frack. PMID:25353434
Loopless nontrapping invasion-percolation model for fracking
NASA Astrophysics Data System (ADS)
Norris, J. Quinn; Turcotte, Donald L.; Rundle, John B.
2014-02-01
Recent developments in hydraulic fracturing (fracking) have enabled the recovery of large quantities of natural gas and oil from old, low-permeability shales. These developments include a change from low-volume, high-viscosity fluid injection to high-volume, low-viscosity injection. The injected fluid introduces distributed damage that provides fracture permeability for the extraction of the gas and oil. In order to model this process, we utilize a loopless nontrapping invasion percolation previously introduced to model optimal polymers in a strongly disordered medium and for determining minimum energy spanning trees on a lattice. We performed numerical simulations on a two-dimensional square lattice and find significant differences from other percolation models. Additionally, we find that the growing fracture network satisfies both Horton-Strahler and Tokunaga network statistics. As with other invasion percolation models, our model displays burst dynamics, in which the cluster extends rapidly into a connected region. We introduce an alternative definition of bursts to be a consecutive series of opened bonds whose strengths are all below a specified value. Using this definition of bursts, we find good agreement with a power-law frequency-area distribution. These results are generally consistent with the observed distribution of microseismicity observed during a high-volume frack.
Randomness versus deterministic chaos: Effect on invasion percolation clusters
NASA Astrophysics Data System (ADS)
Peng, Chung-Kang; Prakash, Sona; Herrmann, Hans J.; Stanley, H. Eugene
1990-10-01
What is the difference between randomness and chaos \\? Although one can define randomness and one can define chaos, one cannot easily assess the difference in a practical situation. Here we compare the results of these two antipodal approaches on a specific example. Specifically, we study how well the logistic map in its chaotic regime can be used as quasirandom number generator by calculating pertinent properties of a well-known random process: invasion percolation. Only if λ>λ*1 (the first reverse bifurcation point) is a smooth extrapolation in system size possible, and percolation exponents are retrieved. If λ≠1, a sequential filling of the lattice with the random numbers generates a measurable anisotropy in the growth sequence of the clusters, due to short-range correlations.
NASA Astrophysics Data System (ADS)
Karki, Pragalv; Loh, Yen Lee
We simulate three types of random inductor-capacitor (LC) networks on 4000x4000 lattices. We calculate the dynamical conductivity using an equation-of-motion method in which timestep error is eliminated and windowing error is minimized. We extract the critical exponent a such that σ (ω) ~ω-a at low frequencies. The results suggest that there are three different universality classes. The LijCi model, with capacitances from each site to ground, has a = 0 . 32 . The LijCij model, with capacitances along bonds, has a = 0 . The LijCiCij model, with both types of capacitances, has a = 0 . 30 . This implies that classical percolative 2D superconductor-insulator transitions (SITs) generically have σ (ω) --> ∞ as ω --> 0 . Therefore, experiments that give a constant conductivity as ω --> 0 must be explained in terms of quantum effects.
NASA Astrophysics Data System (ADS)
Melchert, O.; Norrenbrock, C.; Hartmann, A. K.
We consider the negative weight percolation (NWP) problem on hypercubic lattice graphs with fully periodic boundary condi- tions in all relevant dimensions from d = 2 to the upper critical dimension d = 6. The problem exhibits edge weights drawn from disorder distributions that allow for weights of either sign. We are interested in the statistical properties of the full ensemble of loops with negative weight, i.e. non-trivial (system spanning) loops as well as topologically trivial ("small") loops that comprise the "loops only" variant of the NWP problem. The NWP phenomenon refers to the disorder driven proliferation of system span- ning loops of total negative weight. For the numerical simulations we employ a mapping of the NWP model to a combinatorial optimization problem that can be solved exactly by using sophisticated matching algorithms. This allows for the numerically exact study of large systems with good statistics, important to ensure a reliable disorder average. Early simulations for the 2d setup led to suggest that the resulting negative-weight percolation (NWP) problem is fundamentally different from conventional percolation. Here, we review several studies that reported on results of numerical simulations aimed at clarifying the geometric properties of NWP on hypercubic lattice graphs and random graphs. Finally we present additional new results for the scaling behavior of the geometric properties and the configurational weight of minimum-weight paths (MWPs) in the "loops + MWP" variant of the model, characterizing an additional threshold ?, above which the disorder averaged MWP weight (ωp) is negative, thereby highlighting a characteristic limiting case of the NWP model at small densities of negative edges.
2D numerical modelling of fluid percolation in the subduction zone
NASA Astrophysics Data System (ADS)
Dymkova, D.; Gerya, T.; Podladchikov, Y.
2012-04-01
Subducting slab dehydration and resulting aqueous fluid percolation triggers partial melting in the mantle wedge and is accompanied with the further melt percolation through the porous space to the region above the slab. This problem is a complex coupled chemical, thermal and mechanical process responsible for the magmatic arcs formation and change of the mantle wedge properties. We have created a two-dimensional model of a two-phase flow in a porous media solving a coupled Darcy-Stokes system of equations for two incompressible media for the case of nonlinear visco-plastic rheology of solid matrix. Our system of equation is expanded for the high-porosity limits and stabilized for the case of high porosity contrasts. We use a finite-difference method with fully staggered grid in a combination with marker-in-cell technique for advection of fluid and solid phase. We performed a comparison with a benchmark of a thermal convection in a porous media in a bottom-heated box to verify the interdependency of Rayleigh and Nusselt numbers with earlier obtained ones (Cherkaoui & Wilcock, 1999). We have demonstrated the stability and robustness of the algorithm in case of strongly non-linear visco-plastic rheology of solid including cases with localization of both deformation and porous flow along spontaneously forming shear bands. We have checked our model for the forming of localized porous channels under a simple shear stress (Katz et al, 2006). We have developed a setup of a self-initiating due to gravitational instability subduction. With our coupled fluid-solid flow we have achieved a self-consistent water downward suction by a slab bending predicted by the other models with a simplified fluid kinematical motion implementation (Faccenda et al, 2009). With this setup we have obtained a self-consistent upper crust weakening by a porous fluid pressure which was theoretically assumed in the previously existing subduction models (Gerya & Meilick, 2011; Faccenda et al, 2009
Pokemon and MEF2D co-operationally promote invasion of hepatocellular carcinoma.
Hong, Xin; Hong, Xing-Yu; Li, Tao; He, Cheng-Yan
2015-12-01
Hepatocellular carcinoma (HCC) is one of the most deadly human malignancy, and frequent invasion and metastasis is closely associated with its poor prognosis. However, the molecular mechanism underlying HCC invasion is still not completely elucidated. Pokemon is a well-established oncogene for HCC growth, but its contribution to HCC invasion has not been studied yet. In this paper, Pokemon was found to be overexpressed in MHCC-97H HCC cell line, which possesses higher invasiveness. Downregulation of Pokemon abolished the invasion of MHCC-97H HCC cell lines. Pokemon overexpression was able to enhance the invasion of MHCC-97L cells with lower invasiveness. MEF2D, an oncogene promoting the invasion of HCC cells, was further detected to be upregulated and downregulated when Pokemon was overexpressed and silenced, respectively. Online database analysis indicated that one Pokemon recognition site was located within the promoter of MEF2D. Chromatin co-precipitation, luciferase, and qPCR assays all proved that Pokemon can promote the expression of MEF2D in HCC cells. Restoration of MEF2D expression can prevent the impaired invasion of HCC cells with Pokemon silencing, while suppression of MEF2D abolished the effect of Pokemon overexpression on HCC invasion. More interestingly, MEF2D was also found to increase the transcription of Pokemon by binding myocyte enhancer factor 2 (MEF2) sites within its promoter region, implying an auto-regulatory circuit consisting of these two oncogenes that can promote HCC invasion. Our findings can contribute to the understanding of molecular mechanism underlying HCC invasion, and provided evidence that targeting this molecular loop may be a promising strategy for anti-invasion therapy. PMID:26164003
Invasion percolation between two sites in two, three, and four dimensions
NASA Astrophysics Data System (ADS)
Lee, Sang Bub
2009-06-01
The mass distribution of invaded clusters in non-trapping invasion percolation between an injection site and an extraction site has been studied, in two, three, and four dimensions. This study is an extension of the recent study focused on two dimensions by Araújo et al. [A.D. Araújo, T.F. Vasconcelos, A.A. Moreira, L.S. Lucena, J.S. Andrade Jr., Phys. Rev. E 72 (2005) 041404] with respect to higher dimensions. The mass distribution exhibits a power-law behavior, P(m)∝m. It has been found that the index α for pe
NASA Astrophysics Data System (ADS)
Geistlinger, Helmut; Ataei-Dadavi, Iman; Mohammadian, Sadjad; Vogel, Hans-Jörg
2015-11-01
We study the impact of pore structure and surface roughness on capillary trapping of nonwetting gas phase during imbibition with water for capillary numbers between 10-7 and 5 × 10-5, within glass beads, natural sands, glass beads monolayers, and 2-D micromodels. The materials exhibit different roughness of the pore-solid interface. We found that glass beads and natural sands, which exhibit nearly the same grain size distribution, pore size distribution, and connectivity, showed a significant difference of the trapped gas phase of about 15%. This difference can be explained by the microstructure of the pore-solid interface. Based on the visualization of the trapping dynamics within glass beads monolayers and 2-D micromodels, we could show that bypass trapping controls the trapping process in glass beads monolayers, while snap-off trapping controls the trapping process in 2-D micromodels. We conclude that these different trapping processes are the reason for the different trapping efficiency, when comparing glass beads packs with natural sand packs. Moreover, for small capillary numbers of 10-6, we found that the cluster size distribution of trapped gas clusters of all 2-D and 3-D porous media can be described by a universal power law behavior predicted from percolation theory. This cannot be expected a priori for 2-D porous media, because bicontinuity of the two bulk phases is violated. Obviously, bicontinuity holds for the thin-film water phase and the bulk gas phase. The snap-off trapping process leads to ordinary bond percolation in front of the advancing bulk water phase and is the reason for the observed universal power law behavior in 2-D micromodels with rough surfaces.
A fast two-step algorithm for invasion percolation with trapping
NASA Astrophysics Data System (ADS)
Masson, Yder
2016-05-01
I present a fast algorithm for modeling invasion percolation (IP) with trapping (TIP). IP is a numerical algorithm that models quasi-static (i.e. slow) fluid invasion in porous media. Trapping occurs when the invading fluid (that is injected) forms continuous surfaces surrounding patches of the displaced fluid (that is assumed incompressible and originally saturates the invaded medium). In TIP, the invading fluid is not allowed to enter the trapped patches. I demonstrate that TIP can be modeled in two steps: (1) Run an IP simulation without trapping (NTIP). (2) Identify the sites that invaded trapped regions and remove them from the chronological list of sites invaded in NTIP. Fast algorithms exist for solving NTIP. The focus of this paper is to propose an efficient solution for step (2). I show that it can be solved using a disjoint set data structure and going backward in time, i.e. by un-invading all sites invaded in NTIP in reverse order. Time reversal of the invasion greatly reduces the computational complexity for the identification of trapped sites as one only needs to investigate sites neighbor to the latest invaded/un-invaded site. This differs from traditional approaches where trapping is performed in real time, i.e. as the IP simulation is running, and where it is sometimes necessary to investigate the whole lattice to identify newly trapped regions. With the proposed algorithm, the total computational time for the identification and the removal of trapped sites goes as O(N), where N is the total number of sites in the lattice.
Primary migration of hydrocarbon fluids through invasion-percolation cracking in a source rock
NASA Astrophysics Data System (ADS)
Kobchenko, M.; Panahi, H.; Renard, F.; Malthe-Sorenssen, A.; Scheibert, J.; Dysthe, D.; Meakin, P.
2010-12-01
A petroleum source rock is a tightly bound mixture of highly viscous, high molecular weight, organics (kerogen) and inorganic sedimentary material. During burial, as the temperature and pressure increase, kerogen decomposes, and low viscosity, low molecular weight, hydrocarbons are generated. Primary migration has been studied for decades, but it still remains an enigma how the generated gas and oil escape from very low permeable shales into secondary migration pathways. There is strong evidence that microfractures play an important role in this process. In order to observe crack nucleation and development we performed high resolution x-ray microtomography experiments on samples of Mahogany Zone Green River Shale (Peance Basin, Colorado, USA). One sample was exposed to a gradual rising temperature under atmospheric pressure and time-lapse 3D images of void formation and cracking were acquired. We show that crack formation occurs via nucleation of small cracks/voids located on kerogen patches initially present in the samples. Then these cracks propagate through an invasion percolation-like process in which the fracture front incrementally moves by local stress relaxation. Finally, the small cracks merge progressively until they span the whole sample.
Geistlinger, Helmut; Ataei-Dadavi, Iman
2015-12-01
We demonstrated that a change in the surface chemistry, i.e., a change from heterogeneous to homogeneous wettability, can dramatically influence capillary trapping, i.e., from significant trapping (∼5%) to no trapping. Furthermore, the displacement process (water displaces air) in glass-beads monolayer with heterogeneous wettability shows (i) a heterogeneous morphology and a stochastic advancement of the interface in the highly ordered triangular structure, (ii) capillary trapping of a broad variety of gas clusters, notably large ganglia-like and network-like gas clusters, and (iii) a variation in the contact angle between 30° and 100°. In the second part of this paper, we compared the experimental results of capillary trapping for the monolayer that possesses a heterogeneous wettability with predictions from the invasion percolation theory and found excellent agreement, e.g., that the experimental cluster size distribution can be described by a universal power-law with an averaged exponent τ(exp)=2.06; that is a deviation of 5% from the theoretical value. This agreement indicates that capillary trapping within the 2D-monolayer is governed by the 3D critical exponent; therefore, the monolayer shows a trapping behavior similar to a 3D-porous media. We proposed an analytical approach to calculate the mass transfer rate constant using functional relationships predicted by percolation theory and compare this result with results derived from empirical relationships, which are often used for modelling the dissolution process of trapped non-wetting phases. PMID:26298285
GLASS JR.,ROBERT J.; CONRAD,STEPHEN H.; YARRINGTON,LANE
2000-03-08
The authors reconceptualize macro modified invasion percolation (MMIP) at the near pore (NP) scale and apply it to simulate the non-wetting phase invasion experiments of Glass et al [in review] conducted in macro-heterogeneous porous media. For experiments where viscous forces were non-negligible, they redefine the total pore filling pressure to include viscous losses within the invading phase as well as the viscous influence to decrease randomness imposed by capillary forces at the front. NP-MMIP exhibits the complex invasion order seen experimentally with characteristic alternations between periods of gravity stabilized and destabilized invasion growth controlled by capillary barriers. The breaching of these barriers and subsequent pore scale fingering of the non-wetting phase is represented extremely well as is the saturation field evolution, and total volume invaded.
Njoku, Innocent; Wanin, Othman; Assey, Anthony; Shabani, Hamisi; Ngerageza, Japhet G; Berlin, Connor D; Härtl, Roger
2016-01-01
Spinal surgery under Eastern-African circumstances is technically demanding and associated with significant complications, such as blood loss, infection, and wound breakdown. We report a spinal trauma case that was performed using minimally invasive surgery (MIS) and navigation, and hypothesize that these newer techniques may enable surgeons to perform effective spinal surgery with minimal complications and good outcomes. During the 2014 First Hands-on Neurotrauma Course held in Dar es Salaam, Tanzania, we successfully performed three minimally invasive and two-dimensional (2D) navigated spinal surgeries to decompress and stabilize patients with complete and incomplete spinal injuries. In this report, we present a case of a paraplegic patient with a T12 burst fracture who tolerated MIS surgery with no intraoperative complications, and is doing well with no postoperative complications one year after surgery. Minimally invasive spinal surgery and 2D navigation may offer advantages in resource-poor countries. As part of the Weill Cornell Tanzania Neurosurgery project and in conjunction with the Foundation for International Education in Neurological Surgery (as well as other organizations), further experiences with 2D navigation and MIS surgery will be recorded in 2015. A neurotrauma registry has already been implemented to better understand the current management of neurotrauma in Eastern Africa. PMID:27026832
Njoku, Innocent; Wanin, Othman; Assey, Anthony; Shabani, Hamisi; Ngerageza, Japhet G; Berlin, Connor D
2016-01-01
Spinal surgery under Eastern-African circumstances is technically demanding and associated with significant complications, such as blood loss, infection, and wound breakdown. We report a spinal trauma case that was performed using minimally invasive surgery (MIS) and navigation, and hypothesize that these newer techniques may enable surgeons to perform effective spinal surgery with minimal complications and good outcomes. During the 2014 First Hands-on Neurotrauma Course held in Dar es Salaam, Tanzania, we successfully performed three minimally invasive and two-dimensional (2D) navigated spinal surgeries to decompress and stabilize patients with complete and incomplete spinal injuries. In this report, we present a case of a paraplegic patient with a T12 burst fracture who tolerated MIS surgery with no intraoperative complications, and is doing well with no postoperative complications one year after surgery. Minimally invasive spinal surgery and 2D navigation may offer advantages in resource-poor countries. As part of the Weill Cornell Tanzania Neurosurgery project and in conjunction with the Foundation for International Education in Neurological Surgery (as well as other organizations), further experiences with 2D navigation and MIS surgery will be recorded in 2015. A neurotrauma registry has already been implemented to better understand the current management of neurotrauma in Eastern Africa. PMID:27026832
Ingeson-Carlsson, Camilla; Martinez-Monleon, Angela; Nilsson, Mikael
2015-11-01
Tumor microenvironment influences targeted drug therapy. In this study we compared drug responses to RAF and MEK inhibitors on tumor cell migration in 2D and 3D culture of BRAF(V600E) mutant cell lines derived from human papillary (BCPAP) and anaplastic (SW1736) thyroid carcinomas. Scratch wounding was compared to a double-layered collagen gel model developed for analysis of directed tumor cell invasion during prolonged culture. In BCPAP both PLX4720 and U0126 inhibited growth and migration in 2D and decreased tumor cell survival in 3D. In SW1736 drugs had no effect on migration in 2D but decreased invasion in 3D, however this related to reduced growth. Dual inhibition of BRAF(V600E) and MEK reduced but did not prevent SW1736 invasion although rebound phosphorylation of ERK in response to PLX4720 was blocked by U0126. These findings indicate that anti-tumor drug effects in vitro differ depending on culture conditions (2D vs. 3D) and that the invasive features of anaplastic thyroid cancer depend on non-MEK mechanism(s). PMID:26384551
Schwerter, Michael; Lietzmann, Florian; Schad, Lothar R
2016-09-01
Minimally invasive interventions are frequently aided by 2D projective image guidance. To facilitate the navigation of medical tools within the patient, information from preoperative 3D images can supplement interventional data. This work describes a novel approach to perform a 3D CT data registration to a single interventional native fluoroscopic frame. The goal of this procedure is to recover and visualize a current 2D interventional tool position in its corresponding 3D dataset. A dedicated routine was developed and tested on a phantom. The 3D position of a guidewire inserted into the phantom could successfully be reconstructed for varying 2D image acquisition geometries. The scope of the routine includes projecting the CT data into the plane of the fluoroscopy. A subsequent registration of the real and virtual projections is performed with an accuracy within the range of 1.16±0.17mm for fixed landmarks. The interventional tool is extracted from the fluoroscopy and matched to the corresponding part of the projected and transformed arterial vasculature. A root mean square error of up to 0.56mm for matched point pairs is reached. The desired 3D view is provided by backprojecting the matched guidewire through the CT array. Due to its potential to reduce patient dose and treatment times, the proposed routine has the capability of reducing patient stress at lower overall treatment costs. PMID:27157275
Jarc, Anthony M; Shah, Swar H; Adebar, Troy; Hwang, Eric; Aron, Monish; Gill, Inderbir S; Hung, Andrew J
2016-06-01
Experienced surgeons commonly mentor trainees as they move through their initial learning curves. During robot-assisted minimally invasive surgery, several tools exist to facilitate proctored cases, such as two-dimensional telestration and a dual surgeon console. The purpose of this study was to evaluate the utility and efficiency of three, novel proctoring tools for robot-assisted minimally invasive surgery, and to compare them to existing proctoring tools. Twenty-six proctor-trainee pairs completed validated, dry-lab training exercises using standard two-dimensional telestration and three, new three-dimensional proctoring tools called ghost tools. During each exercise, proctors mentored trainees by correcting trainee technical errors. Proctors and trainees completed post-study questionnaires to compare the effectiveness of the proctoring tools. Proctors and trainees consistently rated the ghost tools as effective proctoring tools. Both proctors and trainees preferred 3DInstruments and 3DHands over standard two-dimensional telestration (proctors p < 0.001 and p = 0.03, respectively, and trainees p < 0.001 and p = 0.002, respectively). In addition, proctors preferred three-dimensional vision of the operative field (used with ghost tools) over two-dimensional vision (p < 0.001). Total mentoring time and number of instructions provided by the proctor were comparable between all proctoring tools (p > 0.05). In summary, ghost tools and three-dimensional vision were preferred over standard two-dimensional telestration and two-dimensional vision, respectively, by both proctors and trainees. Proctoring tools-such as ghost tools-have the potential to improve surgeon training by enabling new interactions between a proctor and trainee. PMID:26914650
Competing coexisting phases in 2D water
Zanotti, Jean-Marc; Judeinstein, Patrick; Dalla-Bernardina, Simona; Creff, Gaëlle; Brubach, Jean-Blaise; Roy, Pascale; Bonetti, Marco; Ollivier, Jacques; Sakellariou, Dimitrios; Bellissent-Funel, Marie-Claire
2016-01-01
The properties of bulk water come from a delicate balance of interactions on length scales encompassing several orders of magnitudes: i) the Hydrogen Bond (HBond) at the molecular scale and ii) the extension of this HBond network up to the macroscopic level. Here, we address the physics of water when the three dimensional extension of the HBond network is frustrated, so that the water molecules are forced to organize in only two dimensions. We account for the large scale fluctuating HBond network by an analytical mean-field percolation model. This approach provides a coherent interpretation of the different events experimentally (calorimetry, neutron, NMR, near and far infra-red spectroscopies) detected in interfacial water at 160, 220 and 250 K. Starting from an amorphous state of water at low temperature, these transitions are respectively interpreted as the onset of creation of transient low density patches of 4-HBonded molecules at 160 K, the percolation of these domains at 220 K and finally the total invasion of the surface by them at 250 K. The source of this surprising behaviour in 2D is the frustration of the natural bulk tetrahedral local geometry and the underlying very significant increase in entropy of the interfacial water molecules. PMID:27185018
Competing coexisting phases in 2D water
NASA Astrophysics Data System (ADS)
Zanotti, Jean-Marc; Judeinstein, Patrick; Dalla-Bernardina, Simona; Creff, Gaëlle; Brubach, Jean-Blaise; Roy, Pascale; Bonetti, Marco; Ollivier, Jacques; Sakellariou, Dimitrios; Bellissent-Funel, Marie-Claire
2016-05-01
The properties of bulk water come from a delicate balance of interactions on length scales encompassing several orders of magnitudes: i) the Hydrogen Bond (HBond) at the molecular scale and ii) the extension of this HBond network up to the macroscopic level. Here, we address the physics of water when the three dimensional extension of the HBond network is frustrated, so that the water molecules are forced to organize in only two dimensions. We account for the large scale fluctuating HBond network by an analytical mean-field percolation model. This approach provides a coherent interpretation of the different events experimentally (calorimetry, neutron, NMR, near and far infra-red spectroscopies) detected in interfacial water at 160, 220 and 250 K. Starting from an amorphous state of water at low temperature, these transitions are respectively interpreted as the onset of creation of transient low density patches of 4-HBonded molecules at 160 K, the percolation of these domains at 220 K and finally the total invasion of the surface by them at 250 K. The source of this surprising behaviour in 2D is the frustration of the natural bulk tetrahedral local geometry and the underlying very significant increase in entropy of the interfacial water molecules.
Competing coexisting phases in 2D water.
Zanotti, Jean-Marc; Judeinstein, Patrick; Dalla-Bernardina, Simona; Creff, Gaëlle; Brubach, Jean-Blaise; Roy, Pascale; Bonetti, Marco; Ollivier, Jacques; Sakellariou, Dimitrios; Bellissent-Funel, Marie-Claire
2016-01-01
The properties of bulk water come from a delicate balance of interactions on length scales encompassing several orders of magnitudes: i) the Hydrogen Bond (HBond) at the molecular scale and ii) the extension of this HBond network up to the macroscopic level. Here, we address the physics of water when the three dimensional extension of the HBond network is frustrated, so that the water molecules are forced to organize in only two dimensions. We account for the large scale fluctuating HBond network by an analytical mean-field percolation model. This approach provides a coherent interpretation of the different events experimentally (calorimetry, neutron, NMR, near and far infra-red spectroscopies) detected in interfacial water at 160, 220 and 250 K. Starting from an amorphous state of water at low temperature, these transitions are respectively interpreted as the onset of creation of transient low density patches of 4-HBonded molecules at 160 K, the percolation of these domains at 220 K and finally the total invasion of the surface by them at 250 K. The source of this surprising behaviour in 2D is the frustration of the natural bulk tetrahedral local geometry and the underlying very significant increase in entropy of the interfacial water molecules. PMID:27185018
Chen, Shanwen; Zhu, Jing; Zuo, Shuai; Ma, Ju; Zhang, Junling; Chen, Guowei; Wang, Xin; Pan, Yisheng; Liu, Yucun; Wang, Pengyuan
1,25-Dihydroxyvitamin D3 (1,25(OH)2D3) has been reported to inhibit proliferation and migration of multiple types of cancer cells. However, the mechanism underlying its anti-metastasis effect is not fully illustrated. In this study, the effect of 1,25(OH)2D3 on TGF-β1/β2-induced epithelial-mesenchymal transition (EMT) is tested in colon cancer cells. The results suggest that 1,25(OH)2D3 inhibited TGF-β1/β2-induced increased invasion and migration of in SW-480 and HT-29 cells. 1,25(OH)2D3 also inhibited the cadherin switch in SW-480 and HT-29 cells. TGF-β1/β2-induced increased expression of EMT-related transcription factors was also inhibited by 1,25(OH)2D3. 1,25(OH)2D3 also inhibited the secretion of MMP-2 and MMP-9 and increased expression of F-actin induced by TGF-β1/β2 in SW-480 cells. Taken together, this study suggests that the suppression of EMT might be one of the mechanisms underlying the anti-metastasis effect of 1,25(OH)2D3 in colon cancer cells. PMID:26523511
Exploring percolative landscapes: Infinite cascades of geometric phase transitions
NASA Astrophysics Data System (ADS)
Timonin, P. N.; Chitov, Gennady Y.
2016-01-01
The evolution of many kinetic processes in 1+1 (space-time) dimensions results in 2 D directed percolative landscapes. The active phases of these models possess numerous hidden geometric orders characterized by various types of large-scale and/or coarse-grained percolative backbones that we define. For the patterns originated in the classical directed percolation (DP) and contact process we show from the Monte Carlo simulation data that these percolative backbones emerge at specific critical points as a result of continuous phase transitions. These geometric transitions belong to the DP universality class and their nonlocal order parameters are the capacities of corresponding backbones. The multitude of conceivable percolative backbones implies the existence of infinite cascades of such geometric transitions in the kinetic processes considered. We present simple arguments to support the conjecture that such cascades of transitions are a generic feature of percolation as well as of many other transitions with nonlocal order parameters.
Exploring percolative landscapes: Infinite cascades of geometric phase transitions.
Timonin, P N; Chitov, Gennady Y
2016-01-01
The evolution of many kinetic processes in 1+1 (space-time) dimensions results in 2D directed percolative landscapes. The active phases of these models possess numerous hidden geometric orders characterized by various types of large-scale and/or coarse-grained percolative backbones that we define. For the patterns originated in the classical directed percolation (DP) and contact process we show from the Monte Carlo simulation data that these percolative backbones emerge at specific critical points as a result of continuous phase transitions. These geometric transitions belong to the DP universality class and their nonlocal order parameters are the capacities of corresponding backbones. The multitude of conceivable percolative backbones implies the existence of infinite cascades of such geometric transitions in the kinetic processes considered. We present simple arguments to support the conjecture that such cascades of transitions are a generic feature of percolation as well as of many other transitions with nonlocal order parameters. PMID:26871019
Percolation threshold on planar Euclidean Gabriel graphs
NASA Astrophysics Data System (ADS)
Norrenbrock, Christoph
2016-04-01
In the present article, numerical simulations have been performed to find the bond and site percolation thresholds on two-dimensional Gabriel graphs (GG) for Poisson point processes. GGs belong to the family of "proximity graphs" and are discussed, e.g., in context of the construction of backbones for wireless ad-hoc networks. Finite-size scaling analyses have been performed to find the critical points and critical exponents ν, β and γ. The critical exponents obtained this way verify that the associated universality class is that of standard 2D percolation.
Percolation threshold on planar Euclidean Gabriel graphs
NASA Astrophysics Data System (ADS)
Norrenbrock, Christoph
2016-05-01
In the present article, numerical simulations have been performed to find the bond and site percolation thresholds on two-dimensional Gabriel graphs (GG) for Poisson point processes. GGs belong to the family of "proximity graphs" and are discussed, e.g., in context of the construction of backbones for wireless ad-hoc networks. Finite-size scaling analyses have been performed to find the critical points and critical exponents ν, β and γ. The critical exponents obtained this way verify that the associated universality class is that of standard 2D percolation.
Recent advances in percolation theory and its applications
NASA Astrophysics Data System (ADS)
Saberi, Abbas Ali
2015-05-01
Percolation is the simplest fundamental model in statistical mechanics that exhibits phase transitions signaled by the emergence of a giant connected component. Despite its very simple rules, percolation theory has successfully been applied to describe a large variety of natural, technological and social systems. Percolation models serve as important universality classes in critical phenomena characterized by a set of critical exponents which correspond to a rich fractal and scaling structure of their geometric features. We will first outline the basic features of the ordinary model. Over the years a variety of percolation models has been introduced some of which with completely different scaling and universal properties from the original model with either continuous or discontinuous transitions depending on the control parameter, dimensionality and the type of the underlying rules and networks. We will try to take a glimpse at a number of selective variations including Achlioptas process, half-restricted process and spanning cluster-avoiding process as examples of the so-called explosive percolation. We will also introduce non-self-averaging percolation and discuss correlated percolation and bootstrap percolation with special emphasis on their recent progress. Directed percolation process will be also discussed as a prototype of systems displaying a nonequilibrium phase transition into an absorbing state. In the past decade, after the invention of stochastic Löwner evolution (SLE) by Oded Schramm, two-dimensional (2D) percolation has become a central problem in probability theory leading to the two recent Fields medals. After a short review on SLE, we will provide an overview on existence of the scaling limit and conformal invariance of the critical percolation. We will also establish a connection with the magnetic models based on the percolation properties of the Fortuin-Kasteleyn and geometric spin clusters. As an application we will discuss how percolation
Percolation on Sparse Networks
NASA Astrophysics Data System (ADS)
Karrer, Brian; Newman, M. E. J.; Zdeborová, Lenka
2014-11-01
We study percolation on networks, which is used as a model of the resilience of networked systems such as the Internet to attack or failure and as a simple model of the spread of disease over human contact networks. We reformulate percolation as a message passing process and demonstrate how the resulting equations can be used to calculate, among other things, the size of the percolating cluster and the average cluster size. The calculations are exact for sparse networks when the number of short loops in the network is small, but even on networks with many short loops we find them to be highly accurate when compared with direct numerical simulations. By considering the fixed points of the message passing process, we also show that the percolation threshold on a network with few loops is given by the inverse of the leading eigenvalue of the so-called nonbacktracking matrix.
NASA Astrophysics Data System (ADS)
Solomon, Sorin; Weisbuch, Gerard; de Arcangelis, Lucilla; Jan, Naeem; Stauffer, Dietrich
2000-03-01
We here relate the occurrence of extreme market shares, close to either 0 or 100%, in the media industry to a percolation phenomenon across the social network of customers. We further discuss the possibility of observing self-organized criticality when customers and cinema producers adjust their preferences and the quality of the produced films according to previous experience. Comprehensive computer simulations on square lattices do indeed exhibit self-organized criticality towards the usual percolation threshold and related scaling behaviour.
NASA Astrophysics Data System (ADS)
Kanai, Yasuhiro; Abe, Keiji; Seki, Yoichi
2015-06-01
We propose a price percolation model to reproduce the price distribution of components used in industrial finished goods. The intent is to show, using the price percolation model and a component category as an example, that percolation behaviors, which exist in the matter system, the ecosystem, and human society, also exist in abstract, random phenomena satisfying the power law. First, we discretize the total potential demand for a component category, considering it a random field. Second, we assume that the discretized potential demand corresponding to a function of a finished good turns into actual demand if the difficulty of function realization is less than the maximum difficulty of the realization. The simulations using this model suggest that changes in a component category's price distribution are due to changes in the total potential demand corresponding to the lattice size and the maximum difficulty of realization, which is an occupation probability. The results are verified using electronic components' sales data.
NASA Astrophysics Data System (ADS)
Srivastava, Brijesh K.
2011-07-01
Possible phase transition of strongly interacting matter from hadron to a Quark-Gluon Plasma (QGP) state have in the past received considerable interest. It has been suggested that this problem might be treated by percolation theory. The Color String Percolation Model (CSPM) is used to determine the equation of state (EOS) of the QGP produced in central Au-Au collisions at RHIC energies. The bulk thermodynamic quantities - energy density, entropy density and the sound velocity - are obtained in the framework of CSPM. It is shown that the results are in excellent agreement with the recent lattice QCD calculations(LQCD).
Unstable supercritical discontinuous percolation transitions
NASA Astrophysics Data System (ADS)
Chen, Wei; Cheng, Xueqi; Zheng, Zhiming; Chung, Ning Ning; D'Souza, Raissa M.; Nagler, Jan
2013-10-01
The location and nature of the percolation transition in random networks is a subject of intense interest. Recently, a series of graph evolution processes have been introduced that lead to discontinuous percolation transitions where the addition of a single edge causes the size of the largest component to exhibit a significant macroscopic jump in the thermodynamic limit. These processes can have additional exotic behaviors, such as displaying a “Devil's staircase” of discrete jumps in the supercritical regime. Here we investigate whether the location of the largest jump coincides with the percolation threshold for a range of processes, such as Erdős-Rényipercolation, percolation via edge competition and via growth by overtaking. We find that the largest jump asymptotically occurs at the percolation transition for Erdős-Rényiand other processes exhibiting global continuity, including models exhibiting an “explosive” transition. However, for percolation processes exhibiting genuine discontinuities, the behavior is substantially richer. In percolation models where the order parameter exhibits a staircase, the largest discontinuity generically does not coincide with the percolation transition. For the generalized Bohman-Frieze-Wormald model, it depends on the model parameter. Distinct parameter regimes well in the supercritical regime feature unstable discontinuous transitions—a novel and unexpected phenomenon in percolation. We thus demonstrate that seemingly and genuinely discontinuous percolation transitions can involve a rich behavior in supercriticality, a regime that has been largely ignored in percolation.
Anisotropy in Fracking: A Percolation Model for Observed Microseismicity
NASA Astrophysics Data System (ADS)
Norris, J. Quinn; Turcotte, Donald L.; Rundle, John B.
2015-01-01
Hydraulic fracturing (fracking), using high pressures and a low viscosity fluid, allow the extraction of large quantiles of oil and gas from very low permeability shale formations. The initial production of oil and gas at depth leads to high pressures and an extensive distribution of natural fractures which reduce the pressures. With time these fractures heal, sealing the remaining oil and gas in place. High volume fracking opens the healed fractures allowing the oil and gas to flow to horizontal production wells. We model the injection process using invasion percolation. We use a 2D square lattice of bonds to model the sealed natural fractures. The bonds are assigned random strengths and the fluid, injected at a point, opens the weakest bond adjacent to the growing cluster of opened bonds. Our model exhibits burst dynamics in which the clusters extend rapidly into regions with weak bonds. We associate these bursts with the microseismic activity generated by fracking injections. A principal object of this paper is to study the role of anisotropic stress distributions. Bonds in the y-direction are assigned higher random strengths than bonds in the x-direction. We illustrate the spatial distribution of clusters and the spatial distribution of bursts (small earthquakes) for several degrees of anisotropy. The results are compared with observed distributions of microseismicity in a fracking injection. Both our bursts and the observed microseismicity satisfy Gutenberg-Richter frequency-size statistics.
Electrical Percolation Based Biosensors
Bruck, Hugh Alan; Yang, Minghui; Kostov, Yordan; Rasooly, Avraham
2013-01-01
A new approach to label free biosensing has been developed based on the principle of “electrical percolation”. In electrical percolation, long-range electrical connectivity is formed in randomly oriented and distributed systems of discrete elements. By applying this principle to biological interactions, it is possible to measure biological components both directly and electronically. The main element for electrical percolation biosensor is the biological semiconductor (BSC) which is a multi-layer 3-D carbon nanotube-antibody network. In the BSC, molecular interactions, such as binding of antigens to the antibodies, disrupt the network continuity causing increased resistance of the network. BSCs can be fabricated by immobilizing conducting elements, such as pre-functionalized single-walled carbon nanotubes (SWNTs)-antibody complex, directly onto a substrate, such as a Poly(methyl methacrylate) (PMMA) surface (also known as plexi-glass or Acrylic). BSCs have been demonstrated for direct (label-free) electronic measurements of antibody-antigen binding using SWNTs. If the concentration of the SWNT network is slightly above the electrical percolation threshold, then binding of a specific antigen to the pre-functionalized SWNT dramatically increases the electrical resistance due to changes in the tunneling between the SWNTs. Using anti-Staphylococcal enterotoxin B (SEB) IgG as a “gate” and SEB as an “actuator”, it was demonstrated that the BSC was able to detect SEB at concentrations of 1 ng/ml. Based on this concept, an automated configuration for BSCs is described here that enables real time continuous detection. The new BSC configuration may permit assembly of multiple sensors on the same chip to create “Biological Central Processing Units (CPUs)” with multiple biological elements, capable of processing and sorting out information on multiple analytes simultaneously. PMID:24041756
Percolation testing and hydraulic conductivity of soils for percolation areas.
Mulqueen, J; Rodgers, M
2001-11-01
The results of specific percolation tests are expressed in terms of field saturated hydraulic conductivity (Kfs) of the soil. The specific tests comprise the Irish SR 6 and the UK BS 6297 standard tests and the inversed auger hole and square hole tests employed for the design of land drainage. Percolation times from these tests are converted to Kfs values using unit gradient theory and the Elrick and Reynolds (Soil Sci. 142(5) (1986) 308) model which takes into account gravitational, pressure head and matric potential gradients. Kfs is then expressed as the inverse of the percolation rate times a constant, in this way the percolation rate can be directly related to Kfs of the soil. A plot of Kfs against percolation rate for the Irish SR 6 and the UK BS 6297 standard tests is asymptotic at Kfs values less than 0.2 m/d and greater than 0.8 m/d. This behaviour creates difficulty in setting limits for percolation rates in standards. Curves are provided which enable Kfs values to be read off from percolation tests without the restrictions of head range currently enforced, for example in the Irish SR 6 and BS 6297 standards. Experimental measurements of percolation rates and Kfs were carried out on two sands in the laboratory and in the field on two soils. Kfs of these four materials was also measured using a tension infiltrometer and the Guelph permeameter. The saturated hydraulic conductivities (Ks) of the sands were also estimated in a falling head laboratory apparatus and by the Hazen formula. There was good agreement between the different tests for Kfs on each material. Because percolation time continued to increase significantly in consecutive tests in the same test hole while Kfs became constant, the latter is a better measure of the suitability of soils for percolation. PMID:12230173
NASA Astrophysics Data System (ADS)
Scala, Antonio
2015-03-01
We introduce the concept of self-healing in the field of complex networks modelling; in particular, self-healing capabilities are implemented through distributed communication protocols that exploit redundant links to recover the connectivity of the system. Self-healing is a crucial in implementing the next generation of smart grids allowing to ensure a high quality of service to the users. We then map our self-healing procedure in a percolation problem and analyse the interplay between redundancies and topology in improving the resilience of networked infrastructures to multiple failures. We find exact results both for planar lattices and for random lattices, hinting the role of duality in the design of resilient networks. Finally, we introduce a cavity method approach to study the recovery of connectivity after damage in self-healing networks. CNR-PNR National Project ``Crisis-Lab,'' EU HOME/2013/CIPS/AG/4000005013 project CI2C and EU FET project MULTIPLEX nr.317532.
Percolation thresholds on planar Euclidean relative-neighborhood graphs
NASA Astrophysics Data System (ADS)
Melchert, O.
2013-04-01
In the present article, statistical properties regarding the topology and standard percolation on relative neighborhood graphs (RNGs) for planar sets of points, considering the Euclidean metric, are put under scrutiny. RNGs belong to the family of “proximity graphs”; i.e., their edgeset encodes proximity information regarding the close neighbors for the terminal nodes of a given edge. Therefore they are, e.g., discussed in the context of the construction of backbones for wireless ad hoc networks that guarantee connectedness of all underlying nodes. Here, by means of numerical simulations, we determine the asymptotic degree and diameter of RNGs and we estimate their bond and site percolation thresholds, which were previously conjectured to be nontrivial. We compare the results to regular 2D graphs for which the degree is close to that of the RNG. Finally, we deduce the common percolation critical exponents from the RNG data to verify that the associated universality class is that of standard 2D percolation.
Weak percolation on multiplex networks.
Baxter, Gareth J; Dorogovtsev, Sergey N; Mendes, José F F; Cellai, Davide
2014-04-01
Bootstrap percolation is a simple but nontrivial model. It has applications in many areas of science and has been explored on random networks for several decades. In single-layer (simplex) networks, it has been recently observed that bootstrap percolation, which is defined as an incremental process, can be seen as the opposite of pruning percolation, where nodes are removed according to a connectivity rule. Here we propose models of both bootstrap and pruning percolation for multiplex networks. We collectively refer to these two models with the concept of "weak" percolation, to distinguish them from the somewhat classical concept of ordinary ("strong") percolation. While the two models coincide in simplex networks, we show that they decouple when considering multiplexes, giving rise to a wealth of critical phenomena. Our bootstrap model constitutes the simplest example of a contagion process on a multiplex network and has potential applications in critical infrastructure recovery and information security. Moreover, we show that our pruning percolation model may provide a way to diagnose missing layers in a multiplex network. Finally, our analytical approach allows us to calculate critical behavior and characterize critical clusters. PMID:24827287
Weak percolation on multiplex networks
NASA Astrophysics Data System (ADS)
Baxter, Gareth J.; Dorogovtsev, Sergey N.; Mendes, José F. F.; Cellai, Davide
2014-04-01
Bootstrap percolation is a simple but nontrivial model. It has applications in many areas of science and has been explored on random networks for several decades. In single-layer (simplex) networks, it has been recently observed that bootstrap percolation, which is defined as an incremental process, can be seen as the opposite of pruning percolation, where nodes are removed according to a connectivity rule. Here we propose models of both bootstrap and pruning percolation for multiplex networks. We collectively refer to these two models with the concept of "weak" percolation, to distinguish them from the somewhat classical concept of ordinary ("strong") percolation. While the two models coincide in simplex networks, we show that they decouple when considering multiplexes, giving rise to a wealth of critical phenomena. Our bootstrap model constitutes the simplest example of a contagion process on a multiplex network and has potential applications in critical infrastructure recovery and information security. Moreover, we show that our pruning percolation model may provide a way to diagnose missing layers in a multiplex network. Finally, our analytical approach allows us to calculate critical behavior and characterize critical clusters.
Percolation of spatially constraint networks
NASA Astrophysics Data System (ADS)
Li, Daqing; Li, Guanliang; Kosmidis, Kosmas; Stanley, H. E.; Bunde, Armin; Havlin, Shlomo
2011-03-01
We study how spatial constraints are reflected in the percolation properties of networks embedded in one-dimensional chains and two-dimensional lattices. We assume long-range connections between sites on the lattice where two sites at distance r are chosen to be linked with probability p(r)~r-δ. Similar distributions have been found in spatially embedded real networks such as social and airline networks. We find that for networks embedded in two dimensions, with 2<δ<4, the percolation properties show new intermediate behavior different from mean field, with critical exponents that depend on δ. For δ<2, the percolation transition belongs to the universality class of percolation in Erdös-Rényi networks (mean field), while for δ>4 it belongs to the universality class of percolation in regular lattices. For networks embedded in one dimension, we find that, for δ<1, the percolation transition is mean field. For 1<δ<2, the critical exponents depend on δ, while for δ>2 there is no percolation transition as in regular linear chains.
Explosive percolation in thresholded networks
NASA Astrophysics Data System (ADS)
Hayasaka, Satoru
2016-06-01
Explosive percolation in a network is a phase transition where a large portion of nodes becomes connected with an addition of a small number of edges. Although extensively studied in random network models and reconstructed real networks, explosive percolation has not been observed in a more realistic scenario where a network is generated by thresholding a similarity matrix describing between-node associations. In this report, I examine construction schemes of such thresholded networks, and demonstrate that explosive percolation can be observed by introducing edges in a particular order.
Core percolation on complex networks.
Liu, Yang-Yu; Csóka, Endre; Zhou, Haijun; Pósfai, Márton
2012-11-16
We analytically solve the core percolation problem for complex networks with arbitrary degree distributions. We find that purely scale-free networks have no core for any degree exponents. We show that for undirected networks if core percolation occurs then it is continuous while for directed networks it is discontinuous (and hybrid) if the in- and out-degree distributions differ. We also find that core percolations on undirected and directed networks have completely different critical exponents associated with their critical singularities. PMID:23215509
2005-07-01
Aniso2d is a two-dimensional seismic forward modeling code. The earth is parameterized by an X-Z plane in which the seismic properties Can have monoclinic with x-z plane symmetry. The program uses a user define time-domain wavelet to produce synthetic seismograms anrwhere within the two-dimensional media.
Conductivity of continuum percolating systems
NASA Astrophysics Data System (ADS)
Stenull, Olaf; Janssen, Hans-Karl
2001-11-01
We study the conductivity of a class of disordered continuum systems represented by the Swiss-cheese model, where the conducting medium is the space between randomly placed spherical holes, near the percolation threshold. This model can be mapped onto a bond percolation model where the conductance σ of randomly occupied bonds is drawn from a probability distribution of the form σ-a. Employing the methods of renormalized field theory we show to arbitrary order in ɛ expansion that the critical conductivity exponent of the Swiss-cheese model is given by tSC(a)=(d-2)ν+max[φ,(1-a)-1], where d is the spatial dimension and ν and φ denote the critical exponents for the percolation correlation length and resistance, respectively. Our result confirms a conjecture that is based on the ``nodes, links, and blobs'' picture of percolation clusters.
Signature of Thermal Rigidity Percolation
NASA Astrophysics Data System (ADS)
Huerta, Adrián
2013-12-01
To explore the role that temperature and percolation of rigidity play in determining the macroscopic properties, we propose a model that adds translational degrees of freedom to the spins of the well known Ising hamiltonian. In particular, the Ising model illustrate the longstanding idea that the growth of correlations on approach to a critical point could be describable in terms of the percolation of some sort of "physical cluster". For certain parameters of this model we observe two well defined peaks of CV, that suggest the existence of two kinds of "physical percolation", namely connectivity and rigidity percolation. Thermal fluctuations give rise to two different kinds of elementary excitations, i.e. droplets and configuron, as suggested by Angell in the framework of a bond lattice model approach. The later is reflected in the fluctuations of redundant constraints that gives stability to the structure and correlate with the order parameter.
Deep Percolation in Devegetated Hillslopes
NASA Astrophysics Data System (ADS)
Ebel, B. A.; Hinckley, E. S.
2011-12-01
Deep percolation has recently been recognized as a critical component in hillslope hydrology studies. In devegetated hillslopes where vegetation is killed and, in some cases, removed, deep percolation may be substantially enhanced beyond pre-disturbance magnitudes. We discuss two examples of devegetated hillslopes where water balance partitioning shifted to favor increased deep percolation fluxes for some hydrologic conditions. The first is the Coos Bay Experimental Catchment in Oregon, USA, where commercial forestry resulted in the complete removal of trees. An intensive field campaign in the 1990's resulted in a long term record of precipitation, discharge, piezometric response, and groundwater levels. Hydrologic response modeling confirms hypotheses from the field-data analysis and points to unresolved questions regarding feedbacks between deep percolation and near-surface hydrologic processes. The second example is the area burned by the Fourmile Canyon Fire in Colorado, USA, where a severe wildland fire removed all vegetation from a north-aspect hillslope in 2010. Precipitation, atmospheric conditions, soil-water content, matric potential, and runoff have been measured since the fire devegetated the site. Subsurface sampling of the vadose zone is accomplished using suction lysimeters to capture total nitrate, ammonium, and dissolved organic carbon concentrations. Darcian flux calculations of net infiltration from the shallow soil into fractured granodiorite bedrock are used to estimate solute fluxes to a deeper groundwater system. Virtual experiments using numerical models of unsaturated fluid flow and solute transport further elucidate the temporal dynamics of deep percolation and associated solute fluxes during spring snowmelt and frontal rainstorms, which are the major hydrologic drivers of deep percolation in this fire-impacted system. Together, these examples serve to illustrate the critical importance of deep percolation in disturbed landscapes. The
Greg Flach, Frank Smith
2011-12-31
Mesh2d is a Fortran90 program designed to generate two-dimensional structured grids of the form [x(i),y(i,j)] where [x,y] are grid coordinates identified by indices (i,j). The x(i) coordinates alone can be used to specify a one-dimensional grid. Because the x-coordinates vary only with the i index, a two-dimensional grid is composed in part of straight vertical lines. However, the nominally horizontal y(i,j0) coordinates along index i are permitted to undulate or otherwise vary. Mesh2d also assigns an integer material type to each grid cell, mtyp(i,j), in a user-specified manner. The complete grid is specified through three separate input files defining the x(i), y(i,j), and mtyp(i,j) variations.
2011-12-31
Mesh2d is a Fortran90 program designed to generate two-dimensional structured grids of the form [x(i),y(i,j)] where [x,y] are grid coordinates identified by indices (i,j). The x(i) coordinates alone can be used to specify a one-dimensional grid. Because the x-coordinates vary only with the i index, a two-dimensional grid is composed in part of straight vertical lines. However, the nominally horizontal y(i,j0) coordinates along index i are permitted to undulate or otherwise vary. Mesh2d also assignsmore » an integer material type to each grid cell, mtyp(i,j), in a user-specified manner. The complete grid is specified through three separate input files defining the x(i), y(i,j), and mtyp(i,j) variations.« less
NASA Astrophysics Data System (ADS)
Lotsch, Bettina V.
2015-07-01
Graphene's legacy has become an integral part of today's condensed matter science and has equipped a whole generation of scientists with an armory of concepts and techniques that open up new perspectives for the postgraphene area. In particular, the judicious combination of 2D building blocks into vertical heterostructures has recently been identified as a promising route to rationally engineer complex multilayer systems and artificial solids with intriguing properties. The present review highlights recent developments in the rapidly emerging field of 2D nanoarchitectonics from a materials chemistry perspective, with a focus on the types of heterostructures available, their assembly strategies, and their emerging properties. This overview is intended to bridge the gap between two major—yet largely disjunct—developments in 2D heterostructures, which are firmly rooted in solid-state chemistry or physics. Although the underlying types of heterostructures differ with respect to their dimensions, layer alignment, and interfacial quality, there is common ground, and future synergies between the various assembly strategies are to be expected.
Clique percolation in random graphs.
Li, Ming; Deng, Youjin; Wang, Bing-Hong
2015-10-01
As a generation of the classical percolation, clique percolation focuses on the connection of cliques in a graph, where the connection of two k cliques means that they share at least l
Percolation transitions in two dimensions.
Feng, Xiaomei; Deng, Youjin; Blöte, Henk W J
2008-09-01
We investigate bond- and site-percolation models on several two-dimensional lattices numerically, by means of transfer-matrix calculations and Monte Carlo simulations. The lattices include the square, triangular, honeycomb kagome, and diced lattices with nearest-neighbor bonds, and the square lattice with nearest- and next-nearest-neighbor bonds. Results are presented for the bond-percolation thresholds of the kagome and diced lattices, and the site-percolation thresholds of the square, honeycomb, and diced lattices. We also include the bond- and site-percolation thresholds for the square lattice with nearest- and next-nearest-neighbor bonds. We find that corrections to scaling behave according to the second temperature dimension X_{t2}=4 predicted by the Coulomb gas theory and the theory of conformal invariance. In several cases there is evidence for an additional term with the same exponent, but modified by a logarithmic factor. Only for the site-percolation problem on the triangular lattice does such a logarithmic term appear to be small or absent. The amplitude of the power-law correction associated with X_{t2}=4 is found to be dependent on the orientation of the lattice with respect to the cylindrical geometry of the finite systems. PMID:18851022
Percolation transitions in two dimensions
NASA Astrophysics Data System (ADS)
Feng, Xiaomei; Deng, Youjin; Blöte, Henk W. J.
2008-09-01
We investigate bond- and site-percolation models on several two-dimensional lattices numerically, by means of transfer-matrix calculations and Monte Carlo simulations. The lattices include the square, triangular, honeycomb kagome, and diced lattices with nearest-neighbor bonds, and the square lattice with nearest- and next-nearest-neighbor bonds. Results are presented for the bond-percolation thresholds of the kagome and diced lattices, and the site-percolation thresholds of the square, honeycomb, and diced lattices. We also include the bond- and site-percolation thresholds for the square lattice with nearest- and next-nearest-neighbor bonds. We find that corrections to scaling behave according to the second temperature dimension Xt2=4 predicted by the Coulomb gas theory and the theory of conformal invariance. In several cases there is evidence for an additional term with the same exponent, but modified by a logarithmic factor. Only for the site-percolation problem on the triangular lattice does such a logarithmic term appear to be small or absent. The amplitude of the power-law correction associated with Xt2=4 is found to be dependent on the orientation of the lattice with respect to the cylindrical geometry of the finite systems.
Clique percolation in random graphs
NASA Astrophysics Data System (ADS)
Li, Ming; Deng, Youjin; Wang, Bing-Hong
2015-10-01
As a generation of the classical percolation, clique percolation focuses on the connection of cliques in a graph, where the connection of two k cliques means that they share at least l
Clique percolation in random networks.
Derényi, Imre; Palla, Gergely; Vicsek, Tamás
2005-04-29
The notion of k-clique percolation in random graphs is introduced, where k is the size of the complete subgraphs whose large scale organizations are analytically and numerically investigated. For the Erdos-Rényi graph of N vertices we obtain that the percolation transition of k-cliques takes place when the probability of two vertices being connected by an edge reaches the threshold p(c) (k) = [(k - 1)N](-1/(k - 1)). At the transition point the scaling of the giant component with N is highly nontrivial and depends on k. We discuss why clique percolation is a novel and efficient approach to the identification of overlapping communities in large real networks. PMID:15904198
Clique Percolation in Random Networks
NASA Astrophysics Data System (ADS)
Derényi, Imre; Palla, Gergely; Vicsek, Tamás
2005-04-01
The notion of k-clique percolation in random graphs is introduced, where k is the size of the complete subgraphs whose large scale organizations are analytically and numerically investigated. For the Erdős-Rényi graph of N vertices we obtain that the percolation transition of k-cliques takes place when the probability of two vertices being connected by an edge reaches the threshold pc(k)=[(k-1)N]-1/(k-1). At the transition point the scaling of the giant component with N is highly nontrivial and depends on k. We discuss why clique percolation is a novel and efficient approach to the identification of overlapping communities in large real networks.
Evidence of Universal Temperature Scaling in Self-Heated Percolating Networks.
Das, Suprem R; Mohammed, Amr M S; Maize, Kerry; Sadeque, Sajia; Shakouri, Ali; Janes, David B; Alam, Muhammad A
2016-05-11
During routine operation, electrically percolating nanocomposites are subjected to high voltages, leading to spatially heterogeneous current distribution. The heterogeneity implies localized self-heating that may (self-consistently) reroute the percolation pathways and even irreversibly damage the material. In the absence of experiments that can spatially resolve the current distribution and a nonlinear percolation model suitable to interpret them, one relies on empirical rules and safety factors to engineer these materials. In this paper, we use ultrahigh resolution thermo-reflectance imaging, coupled with a new imaging processing technique, to map the spatial distribution ΔT(x, y; I) and histogram f(ΔT) of temperature rise due to self-heating in two types of 2D networks (percolating and copercolating). Remarkably, we find that the self-heating can be described by a simple two-parameter Weibull distribution, even under voltages high enough to reconfigure the percolation pathways. Given the generality of the phenomenological argument supporting the distribution, other percolating networks are likely to show similar stress distribution in response to sufficiently large stimuli. Furthermore, the spatial evolution of the self-heating of network was investigated by analyzing the spatial distribution and spatial correlation, respectively. An estimation of degree of hotspot clustering reveals a mechanism analogous to crystallization physics. The results should encourage nonlinear generalization of percolation models necessary for predictive engineering of nanocomposite materials. PMID:27070737
Continuous percolation transition in suppressed random cluster growth model
NASA Astrophysics Data System (ADS)
Roy, Bappaditya; Santra, S. B.
2016-05-01
A new suppressed cluster growth model on 2D square lattice combining Hoshen-Kopelman and Leath approaches is studied here. The lattice sites are initially occupied randomly with probability (ρ). The empty perimeter sites of the clusters of occupied sites are grown with a cluster size dependent probability. The growth probability is then lowest for the largest cluster and highest for the smallest cluster. At the end of growth process all the cluster related quantities are estimated and they are found to display power law scaling as in percolation transition. However, the values of the critical exponents vary continuously with ρ, the initial seed concentration. At higher values of ρ, the model belongs the percolation universality class.
Percolation of interaction diffusing particles
NASA Technical Reports Server (NTRS)
Selinger, Robin Blumberg; Stanley, H. Eugene
1990-01-01
The connectivity properties of systems of diffusing interacting particles with the blind and myopic diffusion rules are studied. It is found that the blind rule case is equivalent to the lattice gas with J = 0 in all dimensions. The connectivity properties of blind rule diffusion are described by random site percolation due to the fact that the density on neighboring sites is uncorrelated.
Percolation on correlated random networks
NASA Astrophysics Data System (ADS)
Agliari, E.; Cioli, C.; Guadagnini, E.
2011-09-01
We consider a class of random, weighted networks, obtained through a redefinition of patterns in an Hopfield-like model, and, by performing percolation processes, we get information about topology and resilience properties of the networks themselves. Given the weighted nature of the graphs, different kinds of bond percolation can be studied: stochastic (deleting links randomly) and deterministic (deleting links based on rank weights), each mimicking a different physical process. The evolution of the network is accordingly different, as evidenced by the behavior of the largest component size and of the distribution of cluster sizes. In particular, we can derive that weak ties are crucial in order to maintain the graph connected and that, when they are the most prone to failure, the giant component typically shrinks without abruptly breaking apart; these results have been recently evidenced in several kinds of social networks.
String percolation and the Glasma
NASA Astrophysics Data System (ADS)
de Deus, J. Dias; Pajares, C.
2011-01-01
We compare string percolation phenomenology to Glasma results on particle rapidity densities, effective string or flux tube intrinsic correlations, the ridge phenomena and long range forward-backward correlations. Effective strings may be a tool to extend the Glasma to the low density QCD regime. A good example is given by the minimum of the negative binomial distribution parameter k expected to occur at low energy/centrality.
Roots at the percolation threshold
NASA Astrophysics Data System (ADS)
Kroener, Eva; Ahmed, Mutez Ali; Carminati, Andrea
2015-04-01
The rhizosphere is the layer of soil around the roots where complex and dynamic interactions between plants and soil affect the capacity of plants to take up water. The physical properties of the rhizosphere are affected by mucilage, a gel exuded by roots. Mucilage can absorb large volumes of water, but it becomes hydrophobic after drying. We use a percolation model to describe the rewetting of dry rhizosphere. We find that at a critical mucilage concentration the rhizosphere becomes impermeable. The critical mucilage concentration depends on the radius of the soil particle size. Capillary rise experiments with neutron radiography prove that for concentrations below the critical mucilage concentration water could easily cross the rhizosphere, while above the critical concentration water could no longer percolate through it. Our studies, together with former observations of water dynamics in the rhizosphere, suggest that the rhizosphere is near the percolation threshold, where small variations in mucilage concentration sensitively alter the soil hydraulic conductivity. Is mucilage exudation a plant mechanism to efficiently control the rhizosphere conductivity and the access to water?
Electrical percolation of fibre mixtures
NASA Astrophysics Data System (ADS)
Xie, Juan; Gordon, Stuart; Long, Hairu; Miao, Menghe
2015-11-01
In the development of conductive threads for wearable electronics, nonconductive cotton fibres and conductive stainless steel fibres are mixed to produce composite yarns at a wide range of stainless steel fibre weight fractions. The electrical resistance of the composite yarns is measured at different probe span lengths, ranging from 0.5 to 10 L ss ( L ss = 50 mm is the average length of stainless steel fibres). The percolation threshold and critical exponent are determined for each span length. The critical exponent followed a decreasing trend from 1.87 to 1.17 as the span length was increased. When the conductive fibre loading was expressed in terms of conductive fibre volume fraction, the percolation critical exponent showed a similar trend of change with probe span length. Such a dependence of percolation critical exponent on resistance probe span length has not been previously reported for conductive particle-filled polymer composites, probably because the probe span length used in resistance measurement is orders of magnitude larger than the dimension of the conductive fillers in the composites.
Percolation in dense storage arrays
NASA Astrophysics Data System (ADS)
Kirkpatrick, Scott; Wilcke, Winfried W.; Garner, Robert B.; Huels, Harald
2002-11-01
As computers and their accessories become smaller, cheaper, and faster the providers of news, retail sales, and other services we now take for granted on the Internet have met their increasing computing needs by putting more and more computers, hard disks, power supplies, and the data communications linking them to each other and to the rest of the wired world into ever smaller spaces. This has created a new and quite interesting percolation problem. It is no longer desirable to fix computers, storage or switchgear which fail in such a dense array. Attempts to repair things are all too likely to make problems worse. The alternative approach, letting units “fail in place”, be removed from service and routed around, means that a data communications environment will evolve with an underlying regular structure but a very high density of missing pieces. Some of the properties of this kind of network can be described within the existing paradigm of site or bond percolation on lattices, but other important questions have not been explored. I will discuss 3D arrays of hundreds to thousands of storage servers (something which it is quite feasible to build in the next few years), and show that bandwidth, but not percolation fraction or shortest path lengths, is the critical factor affected by the “fail in place” disorder. Redundancy strategies traditionally employed in storage systems may have to be revised. Novel approaches to routing information among the servers have been developed to minimize the impact.
Percolation in real interdependent networks
NASA Astrophysics Data System (ADS)
Radicchi, Filippo
2015-07-01
The function of a real network depends not only on the reliability of its own components, but is affected also by the simultaneous operation of other real networks coupled with it. Whereas theoretical methods of direct applicability to real isolated networks exist, the frameworks developed so far in percolation theory for interdependent network layers are of little help in practical contexts, as they are suited only for special models in the limit of infinite size. Here, we introduce a set of heuristic equations that takes as inputs the adjacency matrices of the layers to draw the entire phase diagram for the interconnected network. We demonstrate that percolation transitions in interdependent networks can be understood by decomposing these systems into uncoupled graphs: the intersection among the layers, and the remainders of the layers. When the intersection dominates the remainders, an interconnected network undergoes a smooth percolation transition. Conversely, if the intersection is dominated by the contribution of the remainders, the transition becomes abrupt even in small networks. We provide examples of real systems that have developed interdependent networks sharing cores of `high quality’ edges to prevent catastrophic failures.
Percolative fragmentation and spontaneous agglomeration
Hurt, R.; Davis, K.
1999-03-01
Captive particle imaging experiments were performed on over 200 coal and char particles in the pulverized size range from four coals of various rank at oxygen concentration from 3--19 mol% and at gas temperatures of about 1250 K. Despite wide variations in single-particle behavior, the data set reveals two clear trends that provide new information on the nature of char combustion. First, the low-rank coal chars are observed to maintain their high reactivity through the late stages of combustion, thus avoiding the near-extinction events and long burnout tails observed for bituminous coal chars. Secondly, percolative fragmentation in the late stages of combustion is a rare event under these conditions. Some particles reach a percolation threshold rate in combustion, but typically undergo spontaneous agglomeration rather than liberation of the incipient fragments. It is concluded that percolative fragmentation behavior in the pulverized size range is determined not only by solid-phase connectivity, but also by a real competition between disruptive and cohesive forces present at the time of formation of the colloidal-sized incipient fragments.
Roots at the percolation threshold.
Kroener, Eva; Ahmed, Mutez Ali; Carminati, Andrea
2015-04-01
The rhizosphere is the layer of soil around the roots where complex and dynamic interactions between plants and soil affect the capacity of plants to take up water. The physical properties of the rhizosphere are affected by mucilage, a gel exuded by roots. Mucilage can absorb large volumes of water, but it becomes hydrophobic after drying. We use a percolation model to describe the rewetting of dry rhizosphere. We find that at a critical mucilage concentration the rhizosphere becomes impermeable. The critical mucilage concentration depends on the radius of the soil particle size. Capillary rise experiments with neutron radiography prove that for concentrations below the critical mucilage concentration water could easily cross the rhizosphere, while above the critical concentration water could no longer percolate through it. Our studies, together with former observations of water dynamics in the rhizosphere, suggest that the rhizosphere is near the percolation threshold, where small variations in mucilage concentration sensitively alter the soil hydraulic conductivity. Is mucilage exudation a plant mechanism to efficiently control the rhizosphere conductivity and the access to water? PMID:25974526
NASA Astrophysics Data System (ADS)
Wang, Jin; Ma, Jianyong; Zhou, Changhe
2014-11-01
A 3×3 high divergent 2D-grating with period of 3.842μm at wavelength of 850nm under normal incidence is designed and fabricated in this paper. This high divergent 2D-grating is designed by the vector theory. The Rigorous Coupled Wave Analysis (RCWA) in association with the simulated annealing (SA) is adopted to calculate and optimize this 2D-grating.The properties of this grating are also investigated by the RCWA. The diffraction angles are more than 10 degrees in the whole wavelength band, which are bigger than the traditional 2D-grating. In addition, the small period of grating increases the difficulties of fabrication. So we fabricate the 2D-gratings by direct laser writing (DLW) instead of traditional manufacturing method. Then the method of ICP etching is used to obtain the high divergent 2D-grating.
Transport pathways within percolating pore space networks of granular materials
NASA Astrophysics Data System (ADS)
Vo, Kevin; Walker, David M.; Tordesillas, Antoinette
2013-06-01
Granular media can be regarded as a mixture of two components: grains and the material filling the voids or pores between the grains. Pore properties give rise to a range of applications such as modelling ground water flow, carbon capture and sequestration. The grains within a dense granular material respond to deformation (e.g., shearing or compression) by rearranging to create local zones of compression and zones of dilatation (i.e., regions of high pore space). Descriptions of the deformation are typically focused on analysis of the solid skeleton via topology of physical contact networks of grains but an alternative perspective is to consider network representations of the evolving anisotropic pore space. We demonstrate how to construct pore space networks that express the local size of voids about a grain through network edge weights. We investigate sectors of the loading history when a percolating giant component of the pore space network exists. At these states the grains are in a configuration more prone to the efficient transport of material (e.g., fluid flow, mineral/gas deposits). These pathways can be found through examination of the weighted shortest paths percolating the boundaries of the material. In particular, network weights biased towards large void space results in efficient percolating pathways traversing the shear band in the direction of principal stress within a 2D granular assembly subject to high strains.
Noise scaling in continuum percolating films
NASA Astrophysics Data System (ADS)
Garfunkel, G. A.; Weissman, M. B.
1985-07-01
Measurements of the scaling of 1/f noise magnitude versus resistance were made in metal films as the metal was removed by sandblasting. This procedure gives an approximate experimental realization of a Swiss-cheese continuum-percolation model, for which theory indicates some scaling properties very different from lattice percolation. The ratio of the resistance and noise exponents was in strong disagreement with lattice-percolation predictions and agreed approximately with simple continuum predictions.
Semi-directed percolation in two dimensions
NASA Astrophysics Data System (ADS)
Knežević, Dragica; Knežević, Milan
2016-02-01
We studied a model of semi-directed percolation on finite strips of the square and triangular lattices. Using the transfer-matrix method, combined with phenomenological renormalization group approach, we obtain good numerical estimates for critical probabilities and correlation lengths critical exponents. Our results confirm the conjecture that semi-directed percolation belongs to the universality class of the usual fully-directed percolation model.
Changes in the Gradient Percolation Transition Caused by an Allee Effect
NASA Astrophysics Data System (ADS)
Gastner, Michael T.; Oborny, Beata; Ryabov, Alexey B.; Blasius, Bernd
2011-03-01
The establishment and spreading of biological populations depends crucially on population growth at low densities. The Allee effect is a problem in those populations where the per capita growth rate at low densities is reduced. We examine stochastic spatial models in which the reproduction rate changes across a gradient g so that the population undergoes a 2D-percolation transition. Without the Allee effect, the transition is continuous and the width w of the hull scales as in conventional (i.e., uncorrelated) gradient percolation, w∝g-0.57. However, with a strong Allee effect the transition is first order and w∝g-0.26.
Changes in the gradient percolation transition caused by an Allee effect.
Gastner, Michael T; Oborny, Beata; Ryabov, Alexey B; Blasius, Bernd
2011-03-25
The establishment and spreading of biological populations depends crucially on population growth at low densities. The Allee effect is a problem in those populations where the per capita growth rate at low densities is reduced. We examine stochastic spatial models in which the reproduction rate changes across a gradient g so that the population undergoes a 2D-percolation transition. Without the Allee effect, the transition is continuous and the width w of the hull scales as in conventional (i.e., uncorrelated) gradient percolation, w ∝ g(-0.57). However, with a strong Allee effect the transition is first order and w ∝ g(-0.26). PMID:21517354
Weighted Percolation on Directed Networks
NASA Astrophysics Data System (ADS)
Restrepo, Juan G.; Ott, Edward; Hunt, Brian R.
2008-02-01
We present and numerically test an analysis of the percolation transition for general node removal strategies valid for locally treelike directed networks. On the basis of heuristic arguments we predict that, if the probability of removing node i is pi, the network disintegrates if pi is such that the largest eigenvalue of the matrix with entries Aij(1-pi) is less than 1, where A is the adjacency matrix of the network. The knowledge or applicability of a Markov network model is not required by our theory, thus making it applicable to situations not covered by previous works.
Experimental and computational investigation of percolation in complex polymer nanocomposites
NASA Astrophysics Data System (ADS)
Stevens, Derrick; Downen, Lori; Gorga, Russell; Clarke, Laura
2009-03-01
The continuing development of polymer nanocomposites has led to increasingly complex morphology, such as the mats of composite nanofibers formed from electrospinning. The formation of particle networks within the composite volume that leads to enhanced properties, such as electrical conductivity, may be influenced by this complex sample geometry. In this work, experimental and computational efforts are utilized to understand and predict the percolation threshold (critical volume fraction) for two cases: single ultra-high aspect ratio fibers (where fiber diameter can be similar to the particle dimensions) and these same fibers arranged in a random mat with up to 80% porosity. 2D and 3D Monte Carlo simulations, modeled on the actual parameters of our experimental system [1], are utilized and the results are compared with our experimental findings. In particular, confinement to fibers increases the percolation threshold; however the multi-fiber pathways available in mats partially reduce this constraint [2]. [1] S.S. Ojha, D.R. Stevens, K. Stano, T. Hoffman, L.I. Clarke, R.E. Gorga, Macromolecules 41, 2509 (2008). [2] D.R. Stevens, L.N. Downen, L.I. Clarke, Phys. Rev. B in press (2008).
Bootstrap percolation on spatial networks
NASA Astrophysics Data System (ADS)
Gao, Jian; Zhou, Tao; Hu, Yanqing
2015-10-01
Bootstrap percolation is a general representation of some networked activation process, which has found applications in explaining many important social phenomena, such as the propagation of information. Inspired by some recent findings on spatial structure of online social networks, here we study bootstrap percolation on undirected spatial networks, with the probability density function of long-range links’ lengths being a power law with tunable exponent. Setting the size of the giant active component as the order parameter, we find a parameter-dependent critical value for the power-law exponent, above which there is a double phase transition, mixed of a second-order phase transition and a hybrid phase transition with two varying critical points, otherwise there is only a second-order phase transition. We further find a parameter-independent critical value around -1, about which the two critical points for the double phase transition are almost constant. To our surprise, this critical value -1 is just equal or very close to the values of many real online social networks, including LiveJournal, HP Labs email network, Belgian mobile phone network, etc. This work helps us in better understanding the self-organization of spatial structure of online social networks, in terms of the effective function for information spreading.
Bootstrap percolation on spatial networks
Gao, Jian; Zhou, Tao; Hu, Yanqing
2015-01-01
Bootstrap percolation is a general representation of some networked activation process, which has found applications in explaining many important social phenomena, such as the propagation of information. Inspired by some recent findings on spatial structure of online social networks, here we study bootstrap percolation on undirected spatial networks, with the probability density function of long-range links’ lengths being a power law with tunable exponent. Setting the size of the giant active component as the order parameter, we find a parameter-dependent critical value for the power-law exponent, above which there is a double phase transition, mixed of a second-order phase transition and a hybrid phase transition with two varying critical points, otherwise there is only a second-order phase transition. We further find a parameter-independent critical value around −1, about which the two critical points for the double phase transition are almost constant. To our surprise, this critical value −1 is just equal or very close to the values of many real online social networks, including LiveJournal, HP Labs email network, Belgian mobile phone network, etc. This work helps us in better understanding the self-organization of spatial structure of online social networks, in terms of the effective function for information spreading. PMID:26423347
Bond Percolation on Multiplex Networks
NASA Astrophysics Data System (ADS)
Hackett, A.; Cellai, D.; Gómez, S.; Arenas, A.; Gleeson, J. P.
2016-04-01
We present an analytical approach for bond percolation on multiplex networks and use it to determine the expected size of the giant connected component and the value of the critical bond occupation probability in these networks. We advocate the relevance of these tools to the modeling of multilayer robustness and contribute to the debate on whether any benefit is to be yielded from studying a full multiplex structure as opposed to its monoplex projection, especially in the seemingly irrelevant case of a bond occupation probability that does not depend on the layer. Although we find that in many cases the predictions of our theory for multiplex networks coincide with previously derived results for monoplex networks, we also uncover the remarkable result that for a certain class of multiplex networks, well described by our theory, new critical phenomena occur as multiple percolation phase transitions are present. We provide an instance of this phenomenon in a multiplex network constructed from London rail and European air transportation data sets.
2004-08-01
AnisWave2D is a 2D finite-difference code for a simulating seismic wave propagation in fully anisotropic materials. The code is implemented to run in parallel over multiple processors and is fully portable. A mesh refinement algorithm has been utilized to allow the grid-spacing to be tailored to the velocity model, avoiding the over-sampling of high-velocity materials that usually occurs in fixed-grid schemes.
Percolation in suspensions and de Gennes conjectures
NASA Astrophysics Data System (ADS)
Gallier, Stany; Lemaire, Elisabeth; Peters, François; Lobry, Laurent
2015-08-01
Dense suspensions display complex flow properties, intermediate between solid and liquid. When sheared, a suspension self-organizes and forms particle clusters that are likely to percolate, possibly leading to significant changes in the overall behavior. Some theoretical conjectures on percolation in suspensions were proposed by de Gennes some 35 years ago. Although still used, they have not received any validations so far. In this Rapid Communication, we use three-dimensional detailed numerical simulations to understand the formation of percolation clusters and assess de Gennes conjectures. We found that sheared noncolloidal suspensions do show percolation clusters occurring at a critical volume fraction in the range 0.3-0.4 depending on the system size. Percolation clusters are roughly linear, extremely transient, and involve a limited number of particles. We have computed critical exponents and found that clusters can be described reasonably well by standard isotropic percolation theory. The only disagreement with de Gennes concerns the role of percolation clusters on rheology which is found to be weak. Our results eventually validate de Gennes conjectures and demonstrate the relevance of percolation concepts in suspension physics.
Emergence of coexisting percolating clusters in networks
NASA Astrophysics Data System (ADS)
Faqeeh, Ali; Melnik, Sergey; Colomer-de-Simón, Pol; Gleeson, James P.
2016-06-01
It is commonly assumed in percolation theories that at most one percolating cluster can exist in a network. We show that several coexisting percolating clusters (CPCs) can emerge in networks due to limited mixing, i.e., a finite and sufficiently small number of interlinks between network modules. We develop an approach called modular message passing (MMP) to describe and verify these observations. We demonstrate that the appearance of CPCs is an important source of inaccuracy in previously introduced percolation theories, such as the message passing (MP) approach, which is a state-of-the-art theory based on the belief propagation method. Moreover, we show that the MMP theory improves significantly over the predictions of MP for percolation on synthetic networks with limited mixing and also on several real-world networks. These findings have important implications for understanding the robustness of networks and in quantifying epidemic outbreaks in the susceptible-infected-recovered (SIR) model of disease spread.
Emergence of coexisting percolating clusters in networks.
Faqeeh, Ali; Melnik, Sergey; Colomer-de-Simón, Pol; Gleeson, James P
2016-06-01
It is commonly assumed in percolation theories that at most one percolating cluster can exist in a network. We show that several coexisting percolating clusters (CPCs) can emerge in networks due to limited mixing, i.e., a finite and sufficiently small number of interlinks between network modules. We develop an approach called modular message passing (MMP) to describe and verify these observations. We demonstrate that the appearance of CPCs is an important source of inaccuracy in previously introduced percolation theories, such as the message passing (MP) approach, which is a state-of-the-art theory based on the belief propagation method. Moreover, we show that the MMP theory improves significantly over the predictions of MP for percolation on synthetic networks with limited mixing and also on several real-world networks. These findings have important implications for understanding the robustness of networks and in quantifying epidemic outbreaks in the susceptible-infected-recovered (SIR) model of disease spread. PMID:27415281
Global persistence in directed percolation
NASA Astrophysics Data System (ADS)
Oerding, K.; van Wijland, F.
1998-08-01
We consider a directed percolation process at its critical point. The probability that the deviation of the global order parameter with respect to its average has not changed its sign between 0 and t decays with t as a power law. In space dimensions 0305-4470/31/34/004/img5 the global persistence exponent 0305-4470/31/34/004/img6 that characterizes this decay is 0305-4470/31/34/004/img7 while for d<4 its value is increased to first order in 0305-4470/31/34/004/img8. Combining a method developed by Majumdar and Sire with renormalization group techniques we compute the correction to 0305-4470/31/34/004/img6 to first order in 0305-4470/31/34/004/img10. The global persistence exponent is found to be a new and independent exponent. Finally we compare our results with existing simulations.
Transport on exploding percolation clusters
NASA Astrophysics Data System (ADS)
Andrade, José S., Jr.; Herrmann, Hans J.; Moreira, André A.; Oliveira, Cláudio L. N.
2011-03-01
We propose a simple generalization of the explosive percolation process [Achlioptas , ScienceSCIEAS0036-807510.1126/science.1167782 323, 1453 (2009)], and investigate its structural and transport properties. In this model, at each step, a set of q unoccupied bonds is randomly chosen. Each of these bonds is then associated with a weight given by the product of the cluster sizes that they would potentially connect, and only that bond among the q set which has the smallest weight becomes occupied. Our results indicate that, at criticality, all finite-size scaling exponents for the spanning cluster, the conducting backbone, the cutting bonds, and the global conductance of the system, change continuously and significantly with q. Surprisingly, we also observe that systems with intermediate values of q display the worst conductive performance. This is explained by the strong inhibition of loops in the spanning cluster, resulting in a substantially smaller associated conducting backbone.
Roots at the Percolation Threshold
NASA Astrophysics Data System (ADS)
Kroener, E.; Ahmed, M. A.; Kaestner, A.; Vontobel, P.; Zarebanadkouki, M.; Carminati, A.
2014-12-01
Much of the carbon assimilated by plants during photosynthesis is lost to the soil via rhizodepositions. One component of rhizopdeposition is mucilage, a hydrogel that dramatically alters the soil physical properties. Mucilage was assumed to explain unexpectedly low rhizosphere rewetting rates during irrigation (Carminati et al. 2010) and temporarily water repellency in the rhizosphere after severe drying (Moradi et al. 2012).Here, we present an experimental and theoretical study for the rewetting behaviour of a soil mixed with mucilage, which was used as an analogue of the rhizosphere. Our samples were made of two layers of untreated soils separated by a thin layer (ca. 1 mm) of soil treated with mucilage. We prepared soil columns of varying particle size, mucilage concentration and height of the middle layer above the water table. The dry soil columns were re-wetted by capillary rise from the bottom.The rewetting of the middle layer showed a distinct dual behavior. For mucilage concentrations lower than a certain threshold, water could cross the thin layer almost immediately after rewetting of bulk soil. At slightly higher mucilage concentrations, the thin layer was almost impermeable. The mucilage concentration at the threshold strongly depended on particle size: the smaller the particle size the larger the soil specific surface and the more mucilage was needed to cover the entire particle surface and to induce water repellency.We applied a classic pore network model to simulate the experimental observations. In the model a certain fraction of nodes were randomly disconnected to reproduce the effect of mucilage in temporarily blocking the flow. The percolation model could qualitatively reproduce well the threshold characteristics of the experiments. Our experiments, together with former observations of water dynamics in the rhizosphere, suggest that the rhizosphere is near the percolation threshold, where small variations in mucilage concentration sensitively
Percolation thresholds in granular films—non-Universality and critical current
NASA Astrophysics Data System (ADS)
Kirkpatrick, Scott
1980-01-01
The results are reported which should be applicable to the percolation threshold seen in the low temperature properties of inhomogeneous superconductors as the fraction of superconducting material is varied. First, we introduce a simplified model for the deposition of granular films, with an interaction enegy favoring the formation of metal clumps. The percolation problem defined on random samples prepared by this process is nonuniversal: critical exponents are continuous functions of the interaction strength and fiffer from the conventional values. Second, we treat the critical current, using the network model introduced recently by Deutscher and Rappaport[1], and by Huse and Guyer[2], neglecting the effects of structural correlation. Results are presented for 2D and 3D networks. In the course of these calculations, e have obtained a measure of the ''tortuousity'' of percolation paths close to threshold. Both results are conveniently expressed in terms of the percolation coherence length, ξp. The critical current density, Ic, is found to be ∝ξp1-d. The ratio of the network is ∝ in ξp in 2D and Ipδ/ν in 3D, with δ?.35.
NASA Astrophysics Data System (ADS)
Mayor, Louise
2016-05-01
Graphene might be the most famous example, but there are other 2D materials and compounds too. Louise Mayor explains how these atomically thin sheets can be layered together to create flexible “van der Waals heterostructures”, which could lead to a range of novel applications.
Coalescence and percolation in thin metal films
Yu, X.; Duxbury, P.M.; Jeffers, G.; Dubson, M.A. Center for Fundamental Materials Research, Michigan State University, East Lansing, Michigan 48824-1116 )
1991-12-15
Metals thermally evaporated onto warm insulating substrates evolve to the thin-film state via the morphological sequence: compact islands, elongated islands, percolation, hole filling, and finally the thin-film state. The coverage at which the metal percolates ({ital p}{sub {ital c}}) is often considerably higher than that predicted by percolation models, such as inverse swiss cheese or lattice percolation. Using a simple continuum model, we show that high-{ital p}{sub {ital c}}'s arise naturally in thin films that exhibit a crossover from full coalescence of islands at early stages of growth to partial coalescence at later stages. In this interrupted-coalescence model, full coalescence of islands occurs up to a critical island radius {ital R}{sub {ital c}}, after which islands overlap, but do not fully coalesce. We present the morphology of films and the critical area coverages generated by this model.
Discrete scale invariance in supercritical percolation
NASA Astrophysics Data System (ADS)
Schröder, Malte; Chen, Wei; Nagler, Jan
2016-01-01
Recently it has been demonstrated that the connectivity transition from microscopic connectivity to macroscopic connectedness, known as percolation, is generically announced by a cascade of microtransitions of the percolation order parameter (Chen et al 2014 Phys. Rev. Lett. 112 155701). Here we report the discovery of macrotransition cascades which follow percolation. The order parameter grows in discrete macroscopic steps with positions that can be randomly distributed even in the thermodynamic limit. These transition positions are, however, correlated and follow scaling laws which arise from discrete scale invariance (DSI) and non self-averaging, both traditionally unrelated to percolation. We reveal the DSI in ensemble measurements of these non self-averaging systems by rescaling of the individual realizations before averaging.
Lateral diffusion and percolation in membranes.
Sung, Bong June; Yethiraj, Arun
2006-06-01
An algorithm based on Voronoi tessellation and percolation theory is presented to study the diffusion of model membrane components (solutes) in the plasma membrane. The membrane is modeled as a two-dimensional space with integral membrane proteins as static obstacles. The Voronoi diagram consists of vertices, which are equidistant from three matrix obstacles, joined by edges. An edge between two vertices is said to be connected if solute particles can pass directly between the two regions. The percolation threshold, pc, determined using this passage criterion is pc approximately equal to 0.53. This is smaller than if the connectivity of edges were assigned randomly, in which case the percolation threshold pr=2/3, where p is the fraction of connected edges. Molecular dynamics simulations show that diffusion is determined by percolation of clusters of edges. PMID:16803348
Percolation of secret correlations in a network
Leverrier, Anthony; Garcia-Patron, Raul
2011-09-15
In this work, we explore the analogy between entanglement and secret classical correlations in the context of large networks--more precisely, the question of percolation of secret correlations in a network. It is known that entanglement percolation in quantum networks can display a highly nontrivial behavior depending on the topology of the network and on the presence of entanglement between the nodes. Here we show that this behavior, thought to be of a genuine quantum nature, also occurs in a classical context.
A Percolation Model for Fracking
NASA Astrophysics Data System (ADS)
Norris, J. Q.; Turcotte, D. L.; Rundle, J. B.
2014-12-01
Developments in fracking technology have enabled the recovery of vast reserves of oil and gas; yet, there is very little publicly available scientific research on fracking. Traditional reservoir simulator models for fracking are computationally expensive, and require many hours on a supercomputer to simulate a single fracking treatment. We have developed a computationally inexpensive percolation model for fracking that can be used to understand the processes and risks associated with fracking. In our model, a fluid is injected from a single site and a network of fractures grows from the single site. The fracture network grows in bursts, the failure of a relatively strong bond followed by the failure of a series of relatively weak bonds. These bursts display similarities to micro seismic events observed during a fracking treatment. The bursts follow a power-law (Gutenburg-Richter) frequency-size distribution and have growth rates similar to observed earthquake moment rates. These are quantifiable features that can be compared to observed microseismicity to help understand the relationship between observed microseismicity and the underlying fracture network.
Generalized epidemic process and tricritical dynamic percolation
NASA Astrophysics Data System (ADS)
Janssen, Hans-Karl; Müller, Martin; Stenull, Olaf
2004-08-01
The renowned general epidemic process describes the stochastic evolution of a population of individuals which are either susceptible, infected, or dead. A second order phase transition belonging to the universality class of dynamic isotropic percolation lies between the endemic and pandemic behavior of the process. We generalize the general epidemic process by introducing a fourth kind of individuals, viz., individuals which are weakened by the process but not yet infected. This weakening gives rise to a mechanism that introduces a global instability in the spreading of the process and therefore opens the possibility of a discontinuous transition in addition to the usual continuous percolation transition. The tricritical point separating the lines of first and second order transitions constitutes an independent universality class, namely, the universality class of tricritical dynamic isotropic percolation. Using renormalized field theory we work out a detailed scaling description of this universality class. We calculate the scaling exponents in an ɛ expansion below the upper critical dimension dc=5 for various observables describing tricritical percolation clusters and their spreading properties. In a remarkable contrast to the usual percolation transition, the exponents β and β' governing the two order parameters, viz., the mean density and the percolation probability, turn out to be different at the tricritical point. In addition to the scaling exponents we calculate for all our static and dynamic observables logarithmic corrections to the mean-field scaling behavior at dc=5 .
2001-01-31
This software reduces the data from two-dimensional kSA MOS program, k-Space Associates, Ann Arbor, MI. Initial MOS data is recorded without headers in 38 columns, with one row of data per acquisition per lase beam tracked. The final MOSS 2d data file is reduced, graphed, and saved in a tab-delimited column format with headers that can be plotted in any graphing software.
Nanoimprint lithography: 2D or not 2D? A review
NASA Astrophysics Data System (ADS)
Schift, Helmut
2015-11-01
Nanoimprint lithography (NIL) is more than a planar high-end technology for the patterning of wafer-like substrates. It is essentially a 3D process, because it replicates various stamp topographies by 3D displacement of material and takes advantage of the bending of stamps while the mold cavities are filled. But at the same time, it keeps all assets of a 2D technique being able to pattern thin masking layers like in photon- and electron-based traditional lithography. This review reports about 20 years of development of replication techniques at Paul Scherrer Institut, with a focus on 3D aspects of molding, which enable NIL to stay 2D, but at the same time enable 3D applications which are "more than Moore." As an example, the manufacturing of a demonstrator for backlighting applications based on thermally activated selective topography equilibration will be presented. This technique allows generating almost arbitrary sloped, convex and concave profiles in the same polymer film with dimensions in micro- and nanometer scale.
NASA Astrophysics Data System (ADS)
Liu, Jie; Regenauer-Lieb, Klaus
2011-01-01
Percolation theory provides a tool for linking microstructure and macroscopic material properties. In this paper, percolation theory is applied to the analysis of microtomographic images for the purpose of deriving scaling laws for upscaling of properties. We have tested the acquisition of quantities such as percolation threshold, crossover length, fractal dimension, and critical exponent of correlation length from microtomography. By inflating or deflating the target phase and percolation analysis, we can get a critical model and an estimation of the percolation threshold. The crossover length is determined from the critical model by numerical simulation. The fractal dimension can be obtained either from the critical model or from the relative size distribution of clusters. Local probabilities of percolation are used to extract the critical exponent of the correlation length. For near-isotropic samples such as sandstone and bread, the approach works very well. For strongly anisotropic samples, such as highly deformed rock (mylonite) and a tree branch, the percolation threshold and fractal dimension can be assessed with accuracy. However, the uncertainty of the correlation length makes it difficult to accurately extract its critical exponents. Therefore, this aspect of percolation theory cannot be reliably used for upscaling properties of strongly anisotropic media. Other methods of upscaling have to be used for such media.
Surface exponent in percolation and central-force percolation: A test for splay rigidity
NASA Astrophysics Data System (ADS)
Roux, Stéphane; Hansen, Alex
1988-09-01
We study two related problems: one in the usual percolation and the other in central-force percolation; namely, the probability that a site sitting on the border of a semi-infinite domain belongs to either the infinite cluster in usual percolation or the infinitely rigid cluster in central-force percolation. We study the critical exponents describing the critical behavior of these probabilities by a numerical simulation using a transfer-matrix technique. Our results are consistent with the hypothesis that both critical phenomena belong to the same universality class. In addition, our results suggest that the splay-rigid phase threshold is different from the rigidity threshold in central-force percolation.
NASA Astrophysics Data System (ADS)
Babalievski, F.
1995-02-01
The octagonal and dodecagonal quaislattices were generated by means of the grid method. Monte Carlo simulation and cluster counting procedure were used for numerical determination of the site and bond percolation thresholds. Two types of connectivity called ferromagnetic and chemical were studied. The estimated site percolation thresholds are 0.5435… and 0.585… for octagonal lattice and 0.617… and 0.628… for dodecagonal lattice respectively. The obtained spanning fraction curves (for site percolation) seem to approach the 50% value at the percolation threshold. The site percolation conductivity for these lattices was studied by means of a transfer-matrix approach. The critical behavior was found to be the same as for the periodic lattices.
NASA Astrophysics Data System (ADS)
Kale, Sohan; Sabet, Fereshteh A.; Jasiuk, Iwona; Ostoja-Starzewski, Martin
2016-07-01
In this study, we examine the effect of filler alignment on percolation behavior of polymer nanocomposites using Monte Carlo simulations of monodisperse prolate and oblate hard-core soft-shell ellipsoids representing carbon nanotubes and graphene nanoplatelets, respectively. The percolation threshold is observed to increase with increasing extent of alignment as expected. For a highly aligned system of rod-like fillers, the simulation results are shown to be in good agreement with the second virial approximation based predictions. However, for a highly aligned system of disk-like fillers, the second virial approximation based results are observed to significantly deviate from the simulations, even for higher aspect ratios. The effect of filler alignment on anisotropy in percolation behavior is also studied by predicting the percolation threshold along different directions. The anisotropy in percolation threshold is found to vanish even for highly aligned systems of fillers with increasing system size.
Percolation on hypergraphs with four-edges
NASA Astrophysics Data System (ADS)
Khatib Damavandi, Ojan; Ziff, Robert M.
2015-10-01
We study percolation on self-dual hypergraphs that contain hyperedges with four bounding vertices, or ‘four-edges’, using three different generators, each containing bonds or sites with three distinct probabilities p, r, and t connecting the four vertices. We find explicit values of these probabilities that satisfy the self-duality conditions discussed by Bollobás and Riordan. This demonstrates that explicit solutions of the self-duality conditions can be found using generators containing bonds and sites with independent probabilities. These solutions also provide new examples of lattices where exact percolation critical points are known. One of the generators exhibits three distinct criticality solutions (p, r, t). We carry out Monte-Carlo simulations of two of the generators on two different hypergraphs to confirm the critical values. For the case of the hypergraph and uniform generator studied by Wierman et al, we also determine the threshold p = 0.441 374 ± 0.000 001, which falls within the tight bounds that they derived. Furthermore, we consider a generator in which all or none of the vertices can connect, and find a soluble inhomogeneous percolation system that interpolates between site percolation on the union-jack lattice and bond percolation on the square lattice.
Real-time 2-D temperature imaging using ultrasound.
Liu, Dalong; Ebbini, Emad S
2010-01-01
We have previously introduced methods for noninvasive estimation of temperature change using diagnostic ultrasound. The basic principle was validated both in vitro and in vivo by several groups worldwide. Some limitations remain, however, that have prevented these methods from being adopted in monitoring and guidance of minimally invasive thermal therapies, e.g., RF ablation and high-intensity-focused ultrasound (HIFU). In this letter, we present first results from a real-time system for 2-D imaging of temperature change using pulse-echo ultrasound. The front end of the system is a commercially available scanner equipped with a research interface, which allows the control of imaging sequence and access to the RF data in real time. A high-frame-rate 2-D RF acquisition mode, M2D, is used to capture the transients of tissue motion/deformations in response to pulsed HIFU. The M2D RF data is streamlined to the back end of the system, where a 2-D temperature imaging algorithm based on speckle tracking is implemented on a graphics processing unit. The real-time images of temperature change are computed on the same spatial and temporal grid of the M2D RF data, i.e., no decimation. Verification of the algorithm was performed by monitoring localized HIFU-induced heating of a tissue-mimicking elastography phantom. These results clearly demonstrate the repeatability and sensitivity of the algorithm. Furthermore, we present in vitro results demonstrating the possible use of this algorithm for imaging changes in tissue parameters due to HIFU-induced lesions. These results clearly demonstrate the value of the real-time data streaming and processing in monitoring, and guidance of minimally invasive thermotherapy. PMID:19884075
Liu, Chuan-shun; Zhao, Hui; Luo, Ji-wu
2009-01-01
An Evapotranspirative Landfill Cover (ET Landfill Cover) is a simple and economical percolation control system that involves a monolithic soil layer with a vegetative cover.Percolation control in an ET cover system relies on the storage of moisture within the cover soils during precipitation events and subsequently returns it to the atmosphere by evapotranspiration. Percolation control experiments of a bare soil cover and 5 different ET covers were implemented in comprehensive experimental station of water environment of Wuhan University and the water balance calculation of each cover system was conducted, the results shown that the ET cover of 60 cm loamy soil layer with shrub was the most effective among the 6 experimental disposals. However, the experiments demonstrated 60 cm thick of soil layer was not enough to prevent percolation during rainy season and keep the shrub alive during drought season without irrigation. So the Hydrus 2D was selected to simulate the soil water movement in ET covers with different cover thicknesses, the simulations shown that the optimal ET cover in Wuhan area should be 120-140 cm loamy soil layer with shrub. PMID:19353895
Impact of Surface Roughness on Capillary Trapping Using 2D-Micromodel Visualization Experiments
NASA Astrophysics Data System (ADS)
Geistlinger, Helmut; Attaei-Dadavi, Iman; Vogel, Hans-Jörg
2016-04-01
According to experimental observations, capillary trapping is strongly dependent on the roughness of the pore-solid interface. We performed imbibition experiments in the range of capillary numbers (Ca) from 10^-6 to 5x10^-5 using 2D-micromodels, which exhibit a rough surface. The microstructure comprises a double-porosity structure with pronounced macropores. The dynamics of precursor thin-film flow and its importance for capillary trapping is studied. For the first time Thin-Film Dynamics and the Complex Interplay of Thin Film- and Corner Flow for Snap-off Trapping is visualized using fluorescence microscopy. The experimental data for thin-film flow advancement show a square-root time dependence. Contrary to smooth surfaces, we prove by strict thermodynamical arguments that complete wetting is possible in a broad range of contact angles (0 - 90°). We develop a pore-scale model, which describes the front dynamics of thin-film flow on rough surfaces. Furthermore, contact angle hysteresis is considered for rough surfaces. We conduct a comprehensive cluster analysis, studying the influence of viscous forces (capillary number) and buoyancy forces (bond number) on cluster size distribution and comparing the results with predictions from percolation theory. We found that our experimental results agree with theoretical results of percolation theory for Ca = 10^-6: (i) a universal power-like cluster size distribution, (ii) the linear surface-volume relationship of trapped clusters, and (iii) the existence of the cut-off correlation length for the maximal cluster height. The good agreement is a strong argument that the experimental cluster size distribution is caused by a percolation-like trapping process (Ordinary Percolation). [1] H. Geistlinger, I. Ataei-Dadavi, S. Mohammadian, and H.-J. Vogel (2015) The Impact of Pore structure and Surface Roughness on Capillary Trapping for 2D- and 3D-porous media: Comparison with Percolation theory. Special issue: Applications of
Fluid leakage near the percolation threshold
Dapp, Wolf B.; Müser, Martin H.
2016-01-01
Percolation is a concept widely used in many fields of research and refers to the propagation of substances through porous media (e.g., coffee filtering), or the behaviour of complex networks (e.g., spreading of diseases). Percolation theory asserts that most percolative processes are universal, that is, the emergent powerlaws only depend on the general, statistical features of the macroscopic system, but not on specific details of the random realisation. In contrast, our computer simulations of the leakage through a seal—applying common assumptions of elasticity, contact mechanics, and fluid dynamics—show that the critical behaviour (how the flow ceases near the sealing point) solely depends on the microscopic details of the last constriction. It appears fundamentally impossible to accurately predict from statistical properties of the surfaces alone how strongly we have to tighten a water tap to make it stop dripping and also how it starts dripping once we loosen it again. PMID:26839261
Fluid leakage near the percolation threshold
NASA Astrophysics Data System (ADS)
Dapp, Wolf B.; Müser, Martin H.
2016-02-01
Percolation is a concept widely used in many fields of research and refers to the propagation of substances through porous media (e.g., coffee filtering), or the behaviour of complex networks (e.g., spreading of diseases). Percolation theory asserts that most percolative processes are universal, that is, the emergent powerlaws only depend on the general, statistical features of the macroscopic system, but not on specific details of the random realisation. In contrast, our computer simulations of the leakage through a seal—applying common assumptions of elasticity, contact mechanics, and fluid dynamics—show that the critical behaviour (how the flow ceases near the sealing point) solely depends on the microscopic details of the last constriction. It appears fundamentally impossible to accurately predict from statistical properties of the surfaces alone how strongly we have to tighten a water tap to make it stop dripping and also how it starts dripping once we loosen it again.
Fluid leakage near the percolation threshold.
Dapp, Wolf B; Müser, Martin H
2016-01-01
Percolation is a concept widely used in many fields of research and refers to the propagation of substances through porous media (e.g., coffee filtering), or the behaviour of complex networks (e.g., spreading of diseases). Percolation theory asserts that most percolative processes are universal, that is, the emergent powerlaws only depend on the general, statistical features of the macroscopic system, but not on specific details of the random realisation. In contrast, our computer simulations of the leakage through a seal--applying common assumptions of elasticity, contact mechanics, and fluid dynamics--show that the critical behaviour (how the flow ceases near the sealing point) solely depends on the microscopic details of the last constriction. It appears fundamentally impossible to accurately predict from statistical properties of the surfaces alone how strongly we have to tighten a water tap to make it stop dripping and also how it starts dripping once we loosen it again. PMID:26839261
Weakly explosive percolation in directed networks.
Squires, Shane; Sytwu, Katherine; Alcala, Diego; Antonsen, Thomas M; Ott, Edward; Girvan, Michelle
2013-05-01
Percolation, the formation of a macroscopic connected component, is a key feature in the description of complex networks. The dynamical properties of a variety of systems can be understood in terms of percolation, including the robustness of power grids and information networks, the spreading of epidemics and forest fires, and the stability of gene regulatory networks. Recent studies have shown that if network edges are added "competitively" in undirected networks, the onset of percolation is abrupt or "explosive." The unusual qualitative features of this phase transition have been the subject of much recent attention. Here we generalize this previously studied network growth process from undirected networks to directed networks and use finite-size scaling theory to find several scaling exponents. We find that this process is also characterized by a very rapid growth in the giant component, but that this growth is not as sudden as in undirected networks. PMID:23767507
Randomness in fractals, connectivity dimensions, and percolation
NASA Astrophysics Data System (ADS)
Perreau, M.; Levy, J. C. S.
1989-10-01
The structural properties of random fractals embedded in a d-dimensional Euclidean space are studied by means of transfer-matrix formalism of fractal sets. For d=1, both global and local approaches have been investigated, leading to the definition of a subdimension that is different from the fractal dimension and depends on the probability distribution. This subdimension is shown to be identical for the global and local approaches; then, the scaling corrections involved in this subdimension are the same for both these approaches. For d>1, only the local approach can be generalized, characterizing the connectivity properties of these structures. There are exactly d subdimensions called connectivity dimensions that prove to be useful to describe percolation properties of these fractals. Several percolation thresholds are shown, and the fractal dimension of the sets at the percolation threshold are related to the connectivity dimensions.
The structure of percolating lipid monolayers.
Risović, D; Frka, S; Kozarac, Z
2012-05-01
The lattice structure and in plane molecular organization of Langmuir monolayer of amphiphilic material is usually determined from grazing incidence X-ray diffraction (GIXD) or neutron reflectivity. Here we present results of a different approach for determination of monolayer lattice structure based on application of fractal analysis and percolation theory in combination with Brewster angle microscopy. The considerations of compressibility modulus and fractal dimension dynamics provide information on percolation threshold and consequently by application of percolation theory on the lattice structure of a monolayer. We have applied this approach to determine the monolayer lattice structures of single chain and double chain lipids. The compressibility moduli were determined from measured π-A isotherms and fractal dimensions from corresponding BAM images. The monolayer lattice structures of stearic acid, 1-hexadecanol, DPPC and DPPA, obtained in this way conform to the corresponding lattice structures determined previously by other authors using GIXD. PMID:22209411
Percolation conductivity in hafnium sub-oxides
Islamov, D. R. Gritsenko, V. A.; Cheng, C. H.; Chin, A.
2014-12-29
In this study, we demonstrated experimentally that formation of chains and islands of oxygen vacancies in hafnium sub-oxides (HfO{sub x}, x < 2) leads to percolation charge transport in such dielectrics. Basing on the model of Éfros-Shklovskii percolation theory, good quantitative agreement between the experimental and theoretical data of current-voltage characteristics was achieved. Based on the percolation theory suggested model shows that hafnium sub-oxides consist of mixtures of metallic Hf nanoscale clusters of 1–2 nm distributed onto non-stoichiometric HfO{sub x}. It was shown that reported approach might describe low resistance state current-voltage characteristics of resistive memory elements based on HfO{sub x}.
Percolation conductivity in hafnium sub-oxides
NASA Astrophysics Data System (ADS)
Islamov, D. R.; Gritsenko, V. A.; Cheng, C. H.; Chin, A.
2014-12-01
In this study, we demonstrated experimentally that formation of chains and islands of oxygen vacancies in hafnium sub-oxides (HfOx, x < 2) leads to percolation charge transport in such dielectrics. Basing on the model of Éfros-Shklovskii percolation theory, good quantitative agreement between the experimental and theoretical data of current-voltage characteristics was achieved. Based on the percolation theory suggested model shows that hafnium sub-oxides consist of mixtures of metallic Hf nanoscale clusters of 1-2 nm distributed onto non-stoichiometric HfOx. It was shown that reported approach might describe low resistance state current-voltage characteristics of resistive memory elements based on HfOx.
Percolation under noise: Detecting explosive percolation using the second-largest component
NASA Astrophysics Data System (ADS)
Viles, Wes; Ginestet, Cedric E.; Tang, Ariana; Kramer, Mark A.; Kolaczyk, Eric D.
2016-05-01
We consider the problem of distinguishing between different rates of percolation under noise. A statistical model of percolation is constructed allowing for the birth and death of edges as well as the presence of noise in the observations. This graph-valued stochastic process is composed of a latent and an observed nonstationary process, where the observed graph process is corrupted by type-I and type-II errors. This produces a hidden Markov graph model. We show that for certain choices of parameters controlling the noise, the classical (Erdős-Rényi) percolation is visually indistinguishable from a more rapid form of percolation. In this setting, we compare two different criteria for discriminating between these two percolation models, based on the interquartile range (IQR) of the first component's size, and on the maximal size of the second-largest component. We show through data simulations that this second criterion outperforms the IQR of the first component's size, in terms of discriminatory power. The maximal size of the second component therefore provides a useful statistic for distinguishing between different rates of percolation, under physically motivated conditions for the birth and death of edges, and under noise. The potential application of the proposed criteria for the detection of clinically relevant percolation in the context of applied neuroscience is also discussed.
Simulation of Yeast Cooperation in 2D.
Wang, M; Huang, Y; Wu, Z
2016-03-01
Evolution of cooperation has been an active research area in evolutionary biology in decades. An important type of cooperation is developed from group selection, when individuals form spatial groups to prevent them from foreign invasions. In this paper, we study the evolution of cooperation in a mixed population of cooperating and cheating yeast strains in 2D with the interactions among the yeast cells restricted to their small neighborhoods. We conduct a computer simulation based on a game theoretic model and show that cooperation is increased when the interactions are spatially restricted, whether the game is of a prisoner's dilemma, snow drifting, or mutual benefit type. We study the evolution of homogeneous groups of cooperators or cheaters and describe the conditions for them to sustain or expand in an opponent population. We show that under certain spatial restrictions, cooperator groups are able to sustain and expand as group sizes become large, while cheater groups fail to expand and keep them from collapse. PMID:26988702
Percolation systems away from the critical point
NASA Astrophysics Data System (ADS)
Dhar, Deepak
2002-02-01
This article reviews some effects of disorder in percolation systems away from the critical density pc. For densities below pc, the statistics of large clusters defines the animals problem. Its relation to the directed animals problem and the Lee--Yang edge singularity problem is described. Rare compact clusters give rise to Griffiths singularities in the free energy of diluted ferromagnets, and lead to a very slow relaxation of magnetization. In biased diffusion on percolation clusters, trapping in dead-end branches leads to asymptotic drift velocity becoming zero for strong bias, and very slow relaxation of velocity near the critical bias field.
Graphene as a platform to study 2D electronic transitions
NASA Astrophysics Data System (ADS)
Bouchiat, Vincent; Kessler, Brian; Girit, Caglar; Zettl, Alex
2010-03-01
The easily accessible 2D electron gas in graphene provides an ideal platform on which to tune, via application of an electrostatic gate, the coupling between electronically ordered dopants deposited on its surface. To demonstrate this concept, we have measured arrays of superconducting clusters deposited on Graphene capable to induce via the proximity effect a gate-tunable superconducting transition. Using a simple fabrication procedure based on metal layer dewetting, doped graphene sheets can be decorated with a non percolating network on nanoscale tin clusters. This hybrid material displays a two-step superconducting transition. The higher transition step is gate independent and corresponds to the transition of the tin clusters to the superconducting state. The lower transition step towards a real zero resistance state exhibiting a well developped supercurrent, is strongly gate-tunable and is quantitatively described by Berezinskii-Kosterlitz-Thouless 2D vortex unbinding. Our simple self-assembly method and tunable coupling can readily be extended to other electronic order parameters such as ferro/antiferromagnetism, charge/spin density waves using similar decoration techniques. [1] B. M. Kessler, C.O. Girit, A. Zettl, and V. Bouchiat, Tunable Superconducting Phase Transition in Metal-Decorated Graphene Sheets submitted to PRL, arXiv:0907.3661
NASA Astrophysics Data System (ADS)
Tsakiris, N.; Maragakis, M.; Kosmidis, K.; Argyrakis, P.
2010-10-01
We study the percolation properties of the growing clusters model on a 2D square lattice. In this model, a number of seeds placed on random locations on the lattice are allowed to grow with a constant velocity to form clusters. When two or more clusters eventually touch each other they immediately stop their growth. The model exhibits a discontinuous transition for very low values of the seed concentration p and a second, nontrivial continuous phase transition for intermediate p values. Here we study in detail this continuous transition that separates a phase of finite clusters from a phase characterized by the presence of a giant component. Using finite size scaling and large scale Monte Carlo simulations we determine the value of the percolation threshold where the giant component first appears, and the critical exponents that characterize the transition. We find that the transition belongs to a different universality class from the standard percolation transition.
Monochromatic path crossing exponents and graph connectivity in two-dimensional percolation.
Jacobsen, Jesper Lykke; Zinn-Justin, Paul
2002-11-01
We consider the fractal dimensions d(k) of the k-connected part of percolation clusters in two dimensions, generalizing the cluster (k=1) and backbone (k=2) dimensions. The codimensions x(k)=2-d(k) describe the asymptotic decay of the probabilities P(r,R) approximately (r/R)(x(k)) that an annulus of radii r<1 and R>1 is traversed by k disjoint paths, all living on the percolation clusters. Using a transfer matrix approach, we obtain numerical results for x(k), k
NASA Astrophysics Data System (ADS)
Pawłowski, G.
2009-04-01
The problem of order-order and order-disorder transitions in the system described by the 2D antiferromagnetic Blume-Capel model in the presence of a magnetic field is studied by the Wang and Landau flat-histogram simulation method and by the classical Monte Carlo. Anomalous thermodynamic characteristics in low temperatures indicate different type orderings in finite temperatures. The existence of pure antiferromagnetic phases as well as mixed state is shown by detailed phenomenological analysis of the system. The border lines on the phase diagram between various orderings are determined by the complementary microscopic study of the percolation problem for c(2×2) elementary structures of antiferromagnetic ordered phases. This new approach has also shown a full agreement between the percolation threshold for the cluster of mixed phase and the critical temperature of the ordered system.
Generic rigidity percolation in two dimensions
NASA Astrophysics Data System (ADS)
Jacobs, D. J.; Thorpe, M. F.
1996-04-01
We study rigidity percolation for random central-force networks on the bondand site-diluted generic triangular lattice. Here, each site location is randomly displaced from the perfect lattice, removing any special symmetries. Using the pebble game algorithm, the total number of floppy modes are counted exactly, and exhibit a cusp singularity in the second derivative at the transition from a rigid to a floppy structure. The critical thresholds for bond and site dilution are found to be 0.66020+/-0.0003 and 0.69755+/-0.0003, respectively. The network is decomposed into unique rigid clusters, and we apply the usual percolation scaling theory. From finite size scaling, we find that the generic rigidity percolation transition is second order, but in a different universality class from connectivity percolation, with the exponents α=-0.48+/-0.05, β=0.175+/-0.02, and ν=1.21+/-0.06. The fractal dimension of the spanning rigid clusters and the spanning stressed regions at the critical threshold are found to be df=1.86+/-0.02 and dBB=1.80+/-0.03, respectively.
Crossover from isotropic to directed percolation
NASA Astrophysics Data System (ADS)
Zhou, Zongzheng; Yang, Ji; Ziff, Robert M.; Deng, Youjin
2012-08-01
We generalize the directed percolation (DP) model by relaxing the strict directionality of DP such that propagation can occur in either direction but with anisotropic probabilities. We denote the probabilities as p↓=ppd and p↑=p(1-pd), with p representing the average occupation probability and pd controlling the anisotropy. The Leath-Alexandrowicz method is used to grow a cluster from an active seed site. We call this model with two main growth directions biased directed percolation (BDP). Standard isotropic percolation (IP) and DP are the two limiting cases of the BDP model, corresponding to pd=1/2 and pd=0,1 respectively. In this work, besides IP and DP, we also consider the 1/2
Crossover from isotropic to directed percolation.
Zhou, Zongzheng; Yang, Ji; Ziff, Robert M; Deng, Youjin
2012-08-01
We generalize the directed percolation (DP) model by relaxing the strict directionality of DP such that propagation can occur in either direction but with anisotropic probabilities. We denote the probabilities as p(↓) = pp(d) and p(↑) = p(1-p(d)), with p representing the average occupation probability and p(d) controlling the anisotropy. The Leath-Alexandrowicz method is used to grow a cluster from an active seed site. We call this model with two main growth directions biased directed percolation (BDP). Standard isotropic percolation (IP) and DP are the two limiting cases of the BDP model, corresponding to p(d) =1/2 and p(d) = 0,1 respectively. In this work, besides IP and DP, we also consider the 1/2 < p(d) <1 region. Extensive Monte Carlo simulations are carried out on the square and the simple-cubic lattices, and the numerical data are analyzed by finite-size scaling. We locate the percolation thresholds of the BDP model for p(d) = 0.6 and 0.8, and determine various critical exponents. These exponents are found to be consistent with those for standard DP. We also determine the renormalization exponent associated with the asymmetric perturbation due to p(d)-1/2 ≠ 0 near IP, and confirm that such an asymmetric scaling field is relevant at IP. PMID:23005718
Temporal percolation in activity-driven networks
NASA Astrophysics Data System (ADS)
Starnini, Michele; Pastor-Satorras, Romualdo
2014-03-01
We study the temporal percolation properties of temporal networks by taking as a representative example the recently proposed activity-driven-network model [N. Perra et al., Sci. Rep. 2, 469 (2012), 10.1038/srep00469]. Building upon an analytical framework based on a mapping to hidden variables networks, we provide expressions for the percolation time Tp marking the onset of a giant connected component in the integrated network. In particular, we consider both the generating function formalism, valid for degree-uncorrelated networks, and the general case of networks with degree correlations. We discuss the different limits of the two approaches, indicating the parameter regions where the correlated threshold collapses onto the uncorrelated case. Our analytical predictions are confirmed by numerical simulations of the model. The temporal percolation concept can be fruitfully applied to study epidemic spreading on temporal networks. We show in particular how the susceptible-infected-removed model on an activity-driven network can be mapped to the percolation problem up to a time given by the spreading rate of the epidemic process. This mapping allows us to obtain additional information on this process, not available for previous approaches.
Percolation in a kinetic opinion exchange model
NASA Astrophysics Data System (ADS)
Chandra, Anjan Kumar
2012-02-01
We study the percolation transition of the geometrical clusters in the square-lattice LCCC model [a kinetic opinion exchange model introduced by Lallouache, Chakrabarti, Chakraborti, and Chakrabarti, Phys. Rev. EPLEEE81539-375510.1103/PhysRevE.82.056112 82, 056112 (2010)] with the change in conviction and influencing parameter. The cluster is comprised of the adjacent sites having an opinion value greater than or equal to a prefixed threshold value of opinion (Ω). The transition point is different from that obtained for the transition of the order parameter (average opinion value) found by Lallouache Although the transition point varies with the change in the threshold value of the opinion, the critical exponents for the percolation transition obtained from the data collapses of the maximum cluster size, the cluster size distribution, and the Binder cumulant remain the same. The exponents are also independent of the values of conviction and influencing parameters, indicating the robustness of this transition. The exponents do not match any other known percolation exponents (e.g., the static Ising, dynamic Ising, and standard percolation). This means that the LCCC model belongs to a separate universality class.
Upscaling of upward CO2 migration in 2D system
NASA Astrophysics Data System (ADS)
Behzadi, Hamid; Alvarado, Vladimir
2012-09-01
A procedure for upscaling CO2 buoyancy driven upward migration in finite-difference simulation models is presented in this work. This upscaling procedure accounts for capillary and buoyancy forces to enable CO2 upward migration modeling in coarser grids while accounting for dominant fine-scaled geological effects. The developed method is applied to 2D domains with no-flow boundary conditions. The absolute permeability field is correlated in the horizontal direction, with zero correlation in the vertical direction. Capillary pressure is parameterized using a Leveret J-function. A Dykstra-Parsons coefficient of 0.7 was used to generate a relatively heterogeneous absolute permeability field and hence test the developed algorithm under more stringent conditions. Multiphase flow upscaling is improved by accounting for spatial connectivity (percolation), which enables us to obtain more realistic rock-fluid pseudo-functions and capture effects of local capillary trapping at the fine scale (meso-scale trapping). The upscaling method and estimation of rock-fluid functions are numerically tested and compared with currently accepted single and multiphase flow upscaling methods. Results show that single-phase flow upscaling is insufficient, because it fails to adequately predict mobility and residual saturation, and hence multiphase flow upscaling should be employed. Significant improvement in gas travel time (representative of mobility) and trapped CO2 saturation (representative of trapped saturation) are observed when spatial connectivity (percolation) is included. The simulation execution time reduces 17-fold through upscaling. This speedup will enable simulating 3D CO2 sequestration simulation scenarios.
Davis, P. M.; Knopoff, L.
2009-01-01
We study the modulus of a medium containing a varying density of nonintersecting and intersecting antiplane cracks. The modulus of nonintersecting, strongly interacting, 2D antiplane cracks obeys a mean-field theory for which the mean field on a crack inserted in a random ensemble is the applied stress. The result of a self-consistent calculation in the nonintersecting case predicts zero modulus at finite packing, which is physically impossible. Differential self-consistent theories avoid the zero modulus problem, but give results that are more compliant than those of both mean-field theory and computer simulations. For problems in which antiplane cracks are allowed to intersect and form crack clusters or larger effective cracks, percolation at finite packing is expected when the shear modulus vanishes. At low packing factor, the modulus follows the dilute, mean-field curve, but with increased packing, mutual interactions cause the modulus to be less than the mean-field result and to vanish at the percolation threshold. The “nodes-links-blobs” model predicts a power-law approach to the percolation threshold at a critical packing factor of p c = 4.426. We conclude that a power-law variation of modulus with packing, with exponent 1.3 drawn tangentially to the mean-field nonintersecting relation and passing through the percolation threshold, can be expected to be a good approximation. The approximation is shown to be consistent with simulations of intersecting rectangular cracks at all packing densities through to the percolation value for this geometry, p c = 0.4072. PMID:19443684
Disinfection of secondary effluents by infiltration percolation.
Makni, H
2001-01-01
Among the most attractive applications of reclaimed wastewater are: irrigation of public parks, sports fields, golf courses and market gardening. These uses require advanced wastewater treatment including disinfection. According to WHO guidelines (1989) and current rules and regulations in Tunisia, faecal coliform levels have to be reduced to < 10(3) or 10(2) CFU/100 mL. In Tunisia, most wastewater plants are only secondary treatment and, in order to meet health related regulations, the effluents need to be disinfected. However, it is usual for secondary effluents to need filtration prior to disinfection. Effectiveness of conventional disinfection processes, such as chlorination and UV radiation, are dependent upon the oxidation level and the levels of suspended solids of the treated water. Ozonation is relatively expensive and energy consuming. The consideration of the advantages and disadvantages of conventional techniques, their reliability, investment needs and operational costs will lead to the use of less sophisticated alternative techniques for certain facilities. Among alternative techniques, soil aquifer treatment and infiltration percolation through sand beds have been studied in Arizona, Israel, France, Spain and Morocco. Infiltration percolation plants have been intermittently fed with secondary or high quality primary effluents which percolated through 1.5-2 m unsaturated coarse sand and were recovered by under-drains. In such infiltration percolation facilities, microorganisms were eliminated through numerous physical, physicochemical and biological inter-related processes (mechanical filtration, adsorption and microbial degradation respectively). Efficiency of faecal coliform removal was dependent upon the water detention times in the filtering medium and on the oxidation of the filtered water. Effluents of Sfax town aerated ponds were infiltrated through 1.5 m deep sand columns in order to determine the performance of infiltration percolation in the
Phase transitions in supercritical explosive percolation
NASA Astrophysics Data System (ADS)
Chen, Wei; Nagler, Jan; Cheng, Xueqi; Jin, Xiaolong; Shen, Huawei; Zheng, Zhiming; D'Souza, Raissa M.
2013-05-01
Percolation describes the sudden emergence of large-scale connectivity as edges are added to a lattice or random network. In the Bohman-Frieze-Wormald model (BFW) of percolation, edges sampled from a random graph are considered individually and either added to the graph or rejected provided that the fraction of accepted edges is never smaller than a decreasing function with asymptotic value of α, a constant. The BFW process has been studied as a model system for investigating the underlying mechanisms leading to discontinuous phase transitions in percolation. Here we focus on the regime α∈[0.6,0.95] where it is known that only one giant component, denoted C1, initially appears at the discontinuous phase transition. We show that at some point in the supercritical regime C1 stops growing and eventually a second giant component, denoted C2, emerges in a continuous percolation transition. The delay between the emergence of C1 and C2 and their asymptotic sizes both depend on the value of α and we establish by several techniques that there exists a bifurcation point αc=0.763±0.002. For α∈[0.6,αc), C1 stops growing the instant it emerges and the delay between the emergence of C1 and C2 decreases with increasing α. For α∈(αc,0.95], in contrast, C1 continues growing into the supercritical regime and the delay between the emergence of C1 and C2 increases with increasing α. As we show, αc marks the minimal delay possible between the emergence of C1 and C2 (i.e., the smallest edge density for which C2 can exist). We also establish many features of the continuous percolation of C2 including scaling exponents and relations.
Bottacchi, Francesca; Bottacchi, Stefano; Späth, Florian; Namal, Imge; Hertel, Tobias; Anthopoulos, Thomas D
2016-08-01
The current percolation in polymer-sorted semiconducting (7,5) single-walled carbon nanotube (SWNT) networks, processed from solution, is investigated using a combination of electrical field-effect measurements, atomic force microscopy (AFM), and conductive AFM (C-AFM) techniques. From AFM measurements, the nanotube length in the as-processed (7,5) SWNTs network is found to range from ≈100 to ≈1500 nm, with a SWNT surface density well above the percolation threshold and a maximum surface coverage ≈58%. Analysis of the field-effect charge transport measurements in the SWNT network using a 2D homogeneous random-network stick-percolation model yields an exponent coefficient for the transistors OFF currents of 16.3. This value is indicative of an almost ideal random network containing only a small concentration of metallic SWNTs. Complementary C-AFM measurements on the other hand enable visualization of current percolation pathways in the xy plane and reveal the isotropic nature of the as-spun (7,5) SWNT networks. This work demonstrates the tremendous potential of combining advanced scanning probe techniques with field-effect charge transport measurements for quantification of key network parameters including current percolation, metallic nanotubes content, surface coverage, and degree of SWNT alignment. Most importantly, the proposed approach is general and applicable to other nanoscale networks, including metallic nanowires as well as hybrid nanocomposites. PMID:27375031
Anomalous critical and supercritical phenomena in explosive percolation
NASA Astrophysics Data System (ADS)
D'Souza, Raissa M.; Nagler, Jan
2015-07-01
The emergence of large-scale connectivity on an underlying network or lattice, the so-called percolation transition, has a profound impact on the system’s macroscopic behaviours. There is thus great interest in controlling the location of the percolation transition to either enhance or delay its onset and, more generally, in understanding the consequences of such control interventions. Here we review explosive percolation, the sudden emergence of large-scale connectivity that results from repeated, small interventions designed to delay the percolation transition. These transitions exhibit drastic, unanticipated and exciting consequences that make explosive percolation an emerging paradigm for modelling real-world systems ranging from social networks to nanotubes.
Reversible first-order transition in Pauli percolation
NASA Astrophysics Data System (ADS)
Maksymenko, Mykola; Moessner, Roderich; Shtengel, Kirill
2015-06-01
Percolation plays an important role in fields and phenomena as diverse as the study of social networks, the dynamics of epidemics, the robustness of electricity grids, conduction in disordered media, and geometric properties in statistical physics. We analyze a new percolation problem in which the first-order nature of an equilibrium percolation transition can be established analytically and verified numerically. The rules for this site percolation model are physical and very simple, requiring only the introduction of a weight W (n )=n +1 for a cluster of size n . This establishes that a discontinuous percolation transition can occur with qualitatively more local interactions than in all currently considered examples of explosive percolation; and that, unlike these, it can be reversible. This greatly extends both the applicability of such percolation models in principle and their reach in practice.
Reversible first-order transition in Pauli percolation.
Maksymenko, Mykola; Moessner, Roderich; Shtengel, Kirill
2015-06-01
Percolation plays an important role in fields and phenomena as diverse as the study of social networks, the dynamics of epidemics, the robustness of electricity grids, conduction in disordered media, and geometric properties in statistical physics. We analyze a new percolation problem in which the first-order nature of an equilibrium percolation transition can be established analytically and verified numerically. The rules for this site percolation model are physical and very simple, requiring only the introduction of a weight W(n)=n+1 for a cluster of size n. This establishes that a discontinuous percolation transition can occur with qualitatively more local interactions than in all currently considered examples of explosive percolation; and that, unlike these, it can be reversible. This greatly extends both the applicability of such percolation models in principle and their reach in practice. PMID:26172657
NKG2D ligands as therapeutic targets
Spear, Paul; Wu, Ming-Ru; Sentman, Marie-Louise; Sentman, Charles L.
2013-01-01
The Natural Killer Group 2D (NKG2D) receptor plays an important role in protecting the host from infections and cancer. By recognizing ligands induced on infected or tumor cells, NKG2D modulates lymphocyte activation and promotes immunity to eliminate ligand-expressing cells. Because these ligands are not widely expressed on healthy adult tissue, NKG2D ligands may present a useful target for immunotherapeutic approaches in cancer. Novel therapies targeting NKG2D ligands for the treatment of cancer have shown preclinical success and are poised to enter into clinical trials. In this review, the NKG2D receptor and its ligands are discussed in the context of cancer, infection, and autoimmunity. In addition, therapies targeting NKG2D ligands in cancer are also reviewed. PMID:23833565
On directed interacting animals and directed percolation
NASA Astrophysics Data System (ADS)
Knezevic, Milan; Vannimenus, Jean
2002-03-01
We study the phase diagram of fully directed lattice animals with nearest-neighbour interactions on the square lattice. This model comprises several interesting ensembles (directed site and bond trees, bond animals, strongly embeddable animals) as special cases and its collapse transition is equivalent to a directed bond percolation threshold. Precise estimates for the animal size exponents in the different phases and for the critical fugacities of these special ensembles are obtained from a phenomenological renormalization group analysis of the correlation lengths for strips of width up to n = 17. The crossover region in the vicinity of the collapse transition is analysed in detail and the crossover exponent φ is determined directly from the singular part of the free energy. We show using scaling arguments and an exact relation due to Dhar that φ is equal to the Fisher exponent σ governing the size distribution of large directed percolation clusters.
Local Directed Percolation Probability in Two Dimensions
NASA Astrophysics Data System (ADS)
Inui, Norio; Konno, Norio; Komatsu, Genichi; Kameoka, Koichi
1998-01-01
Using the series expansion method and Monte Carlo simulation,we study the directed percolation probability on the square lattice Vn0=\\{ (x,y) \\in {Z}2:x+y=even, 0 ≤ y ≤ n, - y ≤ x ≤ y \\}.We calculate the local percolationprobability Pnl defined as the connection probability between theorigin and a site (0,n). The critical behavior of P∞lis clearly different from the global percolation probability P∞g characterized by a critical exponent βg.An analysis based on the Padé approximants shows βl=2βg.In addition, we find that the series expansion of P2nl can be expressed as a function of Png.
Discontinuous percolation transitions in real physical systems
NASA Astrophysics Data System (ADS)
Cho, Y. S.; Kahng, B.
2011-11-01
We study discontinuous percolation transitions (PTs) in the diffusion-limited cluster aggregation model of the sol-gel transition as an example of real physical systems, in which the number of aggregation events is regarded as the number of bonds occupied in the system. When particles are Brownian, in which cluster velocity depends on cluster size as vs˜sη with η=-0.5, a larger cluster has less probability to collide with other clusters because of its smaller mobility. Thus, the cluster is effectively more suppressed in growth of its size. Then the giant cluster size increases drastically by merging those suppressed clusters near the percolation threshold, exhibiting a discontinuous PT. We also study the tricritical behavior by controlling the parameter η, and the tricritical point is determined by introducing an asymmetric Smoluchowski equation.
Abrupt percolation in small equilibrated networks
NASA Astrophysics Data System (ADS)
Matsoukas, Themis
2015-05-01
Networks can exhibit an abrupt transition in the form of a spontaneous self-organization of a sizable fraction of the population into a giant component of connected members. This behavior has been demonstrated in random graphs under suppressive rules that passively or actively attempt to delay the formation of the giant cluster. We show that suppressive rules are not a necessary condition for a sharp transition at the percolation threshold. Rather, a finite system with aggressive tendency to form a giant cluster may exhibit an instability at the percolation threshold that is relieved through an abrupt and discontinuous transition to the stable branch. We develop the theory for a class of equilibrated networks that produce this behavior and find that the discontinuous jump is especially pronounced in small networks but disappears when the size of the system is infinite.
Percolation in Self-Similar Networks
NASA Astrophysics Data System (ADS)
Serrano, M. Ángeles; Krioukov, Dmitri; Boguñá, Marián
2011-01-01
We provide a simple proof that graphs in a general class of self-similar networks have zero percolation threshold. The considered self-similar networks include random scale-free graphs with given expected node degrees and zero clustering, scale-free graphs with finite clustering and metric structure, growing scale-free networks, and many real networks. The proof and the derivation of the giant component size do not require the assumption that networks are treelike. Our results rely only on the observation that self-similar networks possess a hierarchy of nested subgraphs whose average degree grows with their depth in the hierarchy. We conjecture that this property is pivotal for percolation in networks.
Percolation, wave propagation, and void link up effects in ductile fracture
Tonks, D.L.
1994-02-01
This work investigates the time evolution and spatial morphology of ductile damage based on void growth and coalecence. The size enhancement of damage cluster growth, as well as wave speed limiting of growth, are treated microscopically. Simplified 2D plane strain simulations using individual voids are done with uniaxial stress and explained with a probabilistic theory. At low strain rate, fracture occurs by long, localized cracks. At high strain rates, widespread, random damage breaks the system. The Voronoi tessellation of voids can be used to map out the spatial network of still solid material in 3D ductile fracture. Using it, the spallation porosity is calculated based on percolation theory.
Random fracture networks: percolation, geometry and flow
NASA Astrophysics Data System (ADS)
Adler, P. M.; Thovert, J. F.; Mourzenko, V. V.
2015-12-01
This paper reviews some of the basic properties of fracture networks. Most of the data can only be derived numerically, and to be useful they need to be rationalized, i.e., a large set of numbers should be replaced by a simple formula which is easy to apply for estimating orders of magnitude. Three major tools are found useful in this rationalization effort. First, analytical results can usually be derived for infinite fractures, a limit which corresponds to large densities. Second, the excluded volume and the dimensionless density prove crucial to gather data obtained at intermediate densities. Finally, shape factors can be used to further reduce the influence of fracture shapes. Percolation of fracture networks is of primary importance since this characteristic controls transport properties such as permeability. Recent numerical studies for various types of fracture networks (isotropic, anisotropic, heterogeneous in space, polydisperse, mixture of shapes) are summarized; the percolation threshold rho is made dimensionless by means of the excluded volume. A general correlation for rho is proposed as a function of the gyration radius. The statistical characteristics of the blocks which are cut in the solid matrix by the network are presented, since they control transfers between the porous matrix and the fractures. Results on quantities such as the volume, surface and number of faces are given and semi empirical relations are proposed. The possible intersection of a percolating network and of a cubic cavity is also summarized. This might be of importance for the underground storage of wastes. An approximate reasoning based on the excluded volume of the percolating cluster and of the cubic cavity is proposed. Finally, consequences on the permeability of fracture networks are briefly addressed. An empirical formula which verifies some theoretical properties is proposed.
Generic Rigidity Percolation in Two Dimensions
NASA Astrophysics Data System (ADS)
Thorpe, M. F.; Jacobs, D. J.; Day, A. R.
1996-03-01
We study rigidity percolation for random central-force networks, using the Pebble Game(D. J. Jacobs and M. F. Thorpe, Phys. Rev. Letts. 75), 4051 (1995) algorithm on the bond and site diluted generic triangular lattice. Here, each site location is randomly displaced from the perfect lattice, removing any special symmetries. The total number of floppy modes are counted exactly, and exhibit a cusp singularity in the second derivative of the number of floppy modes, at the transition from a rigid to a floppy structure. The critical thresholds for bond and site dilution are found to be 0.6602 ± 0.0003 and 0.6976 ± 0.0003 respectively. We find that the generic rigidity percolation transition is second order, but in a different universality class than connectivity percolation, with the exponents; α = -0.48 ± 0.05 , β = 0.175 ± 0.02 and ν = 1.21 ± 0.06 . The fractal dimension of the spanning rigid clusters and the spanning stressed regions at the critical threshold are found to be df = 1.86 ± 0.02 and d_BB = 1.80 ± 0.03 respectively. Some elastic properties of the rigid backbone will be discussed.
Percolation of networks with directed dependency links
NASA Astrophysics Data System (ADS)
Niu, Dunbiao; Yuan, Xin; Du, Minhui; Stanley, H. Eugene; Hu, Yanqing
2016-04-01
The self-consistent probabilistic approach has proven itself powerful in studying the percolation behavior of interdependent or multiplex networks without tracking the percolation process through each cascading step. In order to understand how directed dependency links impact criticality, we employ this approach to study the percolation properties of networks with both undirected connectivity links and directed dependency links. We find that when a random network with a given degree distribution undergoes a second-order phase transition, the critical point and the unstable regime surrounding the second-order phase transition regime are determined by the proportion of nodes that do not depend on any other nodes. Moreover, we also find that the triple point and the boundary between first- and second-order transitions are determined by the proportion of nodes that depend on no more than one node. This implies that it is maybe general for multiplex network systems, some important properties of phase transitions can be determined only by a few parameters. We illustrate our findings using Erdős-Rényi networks.
Hidden percolation transition in kinetic replication process
NASA Astrophysics Data System (ADS)
Timonin, P. N.; Chitov, G. Y.
2015-04-01
The one-dimensional kinetic contact process with parallel update is introduced and studied by the mean-field approximation and Monte Carlo (MC) simulations. Contrary to a more conventional scenario with single active phase for 1d models with Ising-like variables, we find two different adjacent active phases in the parameter space of the proposed model with a second-order transition between them and a multiphase point where the active and the absorbing phases meet. While one of the active phases is quite standard with a smooth average filling of the space-time lattice, the second active phase demonstrates a very subtle (hidden) percolating order which becomes manifest only after certain transformation from the original model. We determine the percolation order parameter for active-active phase transition and discuss such hidden orders in other low-dimensional systems. Our MC data demonstrate finite-size critical and near-critical scaling of the order parameter relaxation for the two phase transitions. We find three independent critical indices for them and conclude that they both belong to the directed percolation universality class.
Scaling properties of percolation models for multifragmentation
NASA Astrophysics Data System (ADS)
Ngô, H.; Ngô, C.; Ighezou, F. Z.; Desbois, J.; Leray, S.; Zheng, Y.-M.
1990-03-01
We have used scaling properties of nuclear multifragmentation, which have been observed with emulsion data, to investigate the properties of some approaches based on percolation. We have studied different percolation models on a cubic lattice and shown that they can rather well reproduce the data except for binary break up. We have described what the mean field approximation would give in this context and showed that it cannot reproduce the experimental results. Most of the paper is focused on the restructured aggregation model introduced earlier which allows to well reproduce the scaling properties observed experimentally. This model has been studied in details and extended to take account of bonds breaking. It is shown that, in some cases, a nucleus can break up in two pieces. This process cannot be obtained in conventional percolation or aggregation but is observed experimentally in the emulsion data. Other features like the dimensionality of the aggregation model, the restructuration of the clusters and a schematic constraint in momentum space have also been investigated.
Percolation properties in a traffic model
NASA Astrophysics Data System (ADS)
Wang, Feilong; Li, Daqing; Xu, Xiaoyun; Wu, Ruoqian; Havlin, Shlomo
2015-11-01
As a dynamical complex system, traffic is characterized by a transition from free flow to congestions, which is mostly studied in highways. However, despite its importance in developing congestion mitigation strategies, the understanding of this common traffic phenomenon in a city scale is still missing. An open question is how the traffic in the network collapses from a global efficient traffic to isolated local flows in small clusters, i.e. the question of traffic percolation. Here we study the traffic percolation properties on a lattice by simulation of an agent-based model for traffic. A critical traffic volume in this model distinguishes the free state from the congested state of traffic. Our results show that the threshold of traffic percolation decreases with increasing traffic volume and reaches a minimum value at the critical traffic volume. We show that this minimal threshold is the result of longest spatial correlation between traffic flows at the critical traffic volume. These findings may help to develop congestion mitigation strategies in a network view.
A scanning-mode 2D shear wave imaging (s2D-SWI) system for ultrasound elastography.
Qiu, Weibao; Wang, Congzhi; Li, Yongchuan; Zhou, Juan; Yang, Ge; Xiao, Yang; Feng, Ge; Jin, Qiaofeng; Mu, Peitian; Qian, Ming; Zheng, Hairong
2015-09-01
Ultrasound elastography is widely used for the non-invasive measurement of tissue elasticity properties. Shear wave imaging (SWI) is a quantitative method for assessing tissue stiffness. SWI has been demonstrated to be less operator dependent than quasi-static elastography, and has the ability to acquire quantitative elasticity information in contrast with acoustic radiation force impulse (ARFI) imaging. However, traditional SWI implementations cannot acquire two dimensional (2D) quantitative images of the tissue elasticity distribution. This study proposes and evaluates a scanning-mode 2D SWI (s2D-SWI) system. The hardware and image processing algorithms are presented in detail. Programmable devices are used to support flexible control of the system and the image processing algorithms. An analytic signal based cross-correlation method and a Radon transformation based shear wave speed determination method are proposed, which can be implemented using parallel computation. Imaging of tissue mimicking phantoms, and in vitro, and in vivo imaging test are conducted to demonstrate the performance of the proposed system. The s2D-SWI system represents a new choice for the quantitative mapping of tissue elasticity, and has great potential for implementation in commercial ultrasound scanners. PMID:26025508
Perspectives for spintronics in 2D materials
NASA Astrophysics Data System (ADS)
Han, Wei
2016-03-01
The past decade has been especially creative for spintronics since the (re)discovery of various two dimensional (2D) materials. Due to the unusual physical characteristics, 2D materials have provided new platforms to probe the spin interaction with other degrees of freedom for electrons, as well as to be used for novel spintronics applications. This review briefly presents the most important recent and ongoing research for spintronics in 2D materials.
Topology of a percolating soil pore network
NASA Astrophysics Data System (ADS)
Capa-Morocho, M.; Ruiz-Ramos, M.; Hapca, S. M.; Houston, A.; Tarquis, A. M.
2012-04-01
A connectivity function defined by the 3D-Euler number, is a topological indicator and can be related to hydraulic properties (Vogel and Roth, 2001). This study aims to develop connectivity Euler indexes as indicators of the ability of soils for fluid percolation. The starting point was a 3D grey image acquired by X-ray computed tomography of a soil at bulk density of 1.2 mg cm-3. This image was used in the simulation of 40000 particles following a directed random walk algorithms with 7 binarization thresholds. These data consisted of 7 files containing the simulated end points of the 40000 random walks, obtained in Ruiz-Ramos et al. (2010). MATLAB software was used for computing the frequency matrix of the number of particles arriving at every end point of the random walks and their 3D representation. In a former work (Capa et al., 2011) a criteria for choosing the optimal threshold of grey value was identified: Final positions were divided in two subgroups, cg1 (positions with frequency of the number of particles received greater than the median) and cg2 (frequency lower or equal to median). Images with maximum difference between the Z coordinate of the center of gravity of both subgroups were selected as those with optimal threshold that reflects the major internal differences in soil structure that are relevant to percolation. According to this criterion, the optimal threshold for the soil with density 1.2 mg cm-3 was 24.Thresholds above and below the optimal (23 and 25) were also considered to confirm this selection; therefore the analysis were conducted for three files (1 image with 3 grey threshold values, which have different porosity). Additionally, three random matrix simulations with the same porosity than the selected binaries images were used to test the existence of pore connectivity as a consequence of a non-random soil structure. Therefore, 6 matrix were considered (three structured and three random) for this study. Random matrix presented a normal
NASA Astrophysics Data System (ADS)
Mukherjee, Rupam; Mishra, Debabrata; Huang, Zhifeng; Nadgorny, Boris
2012-10-01
We investigate the percolation behavior in various composite metal -- insulator systems including LiCoO2/ CrO2, MgB2/Al2O3, CrO2/Al2O3, CrO2/ CaCO3. The effect of particle size and shapes in these systems has been studied to better understand the geometrical phase transitions. The power law exponent around the percolation threshold has been found to be 2.0±0.04 in all the cases, which agrees well with the theoretical result. Interestingly, the filling factor of these composite systems also exhibits the power law dependence near the percolation threshold with the value found to be dependent on the shape of the insulating particle. The exponent ranges from 0.2 to 0.4 depending on size of particles of a given shape in the composite system.
NASA Astrophysics Data System (ADS)
Paul, Tathagata; Ghatak, Subhamoy; Ghosh, Arindam
2016-03-01
We have addressed the microscopic transport mechanism at the switching or ‘on-off’ transition in transition metal dichalcogenide (TMDC) field-effect transistors (FETs), which has been a controversial topic in TMDC electronics, especially at room temperature. With simultaneous measurement of channel conductivity and its slow time-dependent fluctuation (or noise) in ultrathin WSe2 and MoS2 FETs on insulating SiO2 substrates where noise arises from McWhorter-type carrier number fluctuations, we establish that the switching in conventional backgated TMDC FETs is a classical percolation transition in a medium of inhomogeneous carrier density distribution. From the experimentally observed exponents in the scaling of noise magnitude with conductivity, we observe unambiguous signatures of percolation in a random resistor network, particularly, in WSe2 FETs close to switching, which crosses over to continuum percolation at a higher doping level. We demonstrate a powerful experimental probe to the microscopic nature of near-threshold electrical transport in TMDC FETs, irrespective of the material detail, device geometry, or carrier mobility, which can be extended to other classes of 2D material-based devices as well.
Paul, Tathagata; Ghatak, Subhamoy; Ghosh, Arindam
2016-03-29
We have addressed the microscopic transport mechanism at the switching or 'on-off' transition in transition metal dichalcogenide (TMDC) field-effect transistors (FETs), which has been a controversial topic in TMDC electronics, especially at room temperature. With simultaneous measurement of channel conductivity and its slow time-dependent fluctuation (or noise) in ultrathin WSe2 and MoS2 FETs on insulating SiO2 substrates where noise arises from McWhorter-type carrier number fluctuations, we establish that the switching in conventional backgated TMDC FETs is a classical percolation transition in a medium of inhomogeneous carrier density distribution. From the experimentally observed exponents in the scaling of noise magnitude with conductivity, we observe unambiguous signatures of percolation in a random resistor network, particularly, in WSe2 FETs close to switching, which crosses over to continuum percolation at a higher doping level. We demonstrate a powerful experimental probe to the microscopic nature of near-threshold electrical transport in TMDC FETs, irrespective of the material detail, device geometry, or carrier mobility, which can be extended to other classes of 2D material-based devices as well. PMID:26891381
NASA Astrophysics Data System (ADS)
Geistlinger, H. W.; Mohammadian, S.; Vogel, H. J.
2014-12-01
To understand capillary trapping mechanism, we conduct a real Monte-Carlo experiment by using packed glass beads with nearly the same pore size distribution, but different stochastic realizations. We study gas phase trapping during imbibition for capillary number from 2×10-7 to 10-6 by X-ray computer tomography (μ-CT) and compare the experimental results with predictions from percolation theory. We found excellent agreement. Percolation theory could explain (i) that the capillary desaturation curves are not dependent on flow rate, (ii) the linear dependence of the total gas surface on gas saturation that is a direct consequence of the linear relationship between cluster surface and cluster volume, which is a prediction from percolation theory for large finite clusters, (iii) the power-like cluster size distribution with an exponent τexp = 2.15 that only deviates by 2% from the theoretical one (τtheor = 2.19), and (iv) that the maximal z-extension of trapped large gas cluster is described by the cut-off correlation length ξB (B - bond number). In order to support the findings from μ-CT-experiments and to study the dynamics of capillary trapping, we conduct visualization experiments using monolayer- and microstructure-models. The Figure shows the residual trapped air (red colored) after water imbibition: left: 2D-cut through a 3D-reconstructed image, right: 3D-slice of a 3D-reconstructed image.
Probability of incipient spanning clusters in critical square bond percolation
Shchur, L.N.; Kosyakov, S.S.
1997-06-01
The probability of simultaneous occurrence of at least k spanning clusters has been studied by Monte Carlo simulations on the 2D square lattice with free boundaries at the bond percolation threshold p{sub c} = {1/2}. It is found that the probability of k and more Incipient Spanning Clusters (ISC) have the values P(k > 1) {approx} 0.00658(3) and P(k > 2) {approx} 0.00000148(21) provided that the limit of these probabilities for infinite lattice exists. The probability P(k > 3) of more than three ISC could be estimated to be of the order of 10{sup -11} and is beyond the possibility to compute such a value by nowadays computers. So, it is impossible to check in simulations the Aizenman law for the probabilities when k {much_gt} 1. We have detected a single sample with four ISC in a total number of about 10{sup 10} samples investigated. The probability of this single event is 1/10 for the number of samples. The influence of boundary conditions is discussed in the last section.
Breaking of the site-bond percolation universality in networks
Radicchi, Filippo; Castellano, Claudio
2015-01-01
The stochastic addition of either vertices or connections in a network leads to the observation of the percolation transition, a structural change with the appearance of a connected component encompassing a finite fraction of the system. Percolation has always been regarded as a substrate-dependent but model-independent process, in the sense that the critical exponents of the transition are determined by the geometry of the system, but they are identical for the bond and site percolation models. Here, we report a violation of such assumption. We provide analytical and numerical evidence of a difference in the values of the critical exponents between the bond and site percolation models in networks with null percolation thresholds, such as scale-free graphs with diverging second moment of the degree distribution. We discuss possible implications of our results in real networks, and provide additional insights on the anomalous nature of the percolation transition with null threshold. PMID:26667155
Explosive site percolation and finite-size hysteresis
NASA Astrophysics Data System (ADS)
Bastas, Nikolaos; Kosmidis, Kosmas; Argyrakis, Panos
2011-12-01
We report the critical point for site percolation for the “explosive” type for two-dimensional square lattices using Monte Carlo simulations and compare it to the classical well-known percolation. We use similar algorithms as have been recently reported for bond percolation and networks. We calculate the explosive site percolation threshold as pc=0.695 and we find evidence that explosive site percolation surprisingly may belong to a different universality class than bond percolation on lattices, providing that the transitions (a) are continuous and (b) obey the conventional finite size scaling forms. Finally, we study and compare the direct and reverse processes, showing that while the reverse process is different from the direct process for finite size systems, the two cases become equivalent in the thermodynamic limit of large L.
Percolation in a Proton Exchange Membrane Fuel Cell Catalyst Layer
Stacy, Stephen; Allen, Jeffrey
2012-07-01
Water management in the catalyst layers of proton exchange membrane fuel cells (PEMFC) is confronted by two issues, flooding and dry out, both of which result in improper functioning of the fuel cell and lead to poor performance and degradation. At the present time, the data that has been reported about water percolation and wettability within a fuel cell catalyst layer is limited. A method and apparatus for measuring the percolation pressure in the catalyst layer has been developed based upon an experimental apparatus used to test water percolation in porous transport layers (PTL). The experimental setup uses a pseudo Hele-Shaw type testing where samples are compressed and a fluid is injected into the sample. Testing the samples gives percolation pressure plots which show trends in increasing percolation pressure with an increase in flow rate. A decrease in pressure was seen as percolation occurred in one sample, however the pressure only had a rising effect in the other sample.
Deformation-assisted fluid percolation in rock salt.
Ghanbarzadeh, Soheil; Hesse, Marc A; Prodanović, Maša; Gardner, James E
2015-11-27
Deep geological storage sites for nuclear waste are commonly located in rock salt to ensure hydrological isolation from groundwater. The low permeability of static rock salt is due to a percolation threshold. However, deformation may be able to overcome this threshold and allow fluid flow. We confirm the percolation threshold in static experiments on synthetic salt samples with x-ray microtomography. We then analyze wells penetrating salt deposits in the Gulf of Mexico. The observed hydrocarbon distributions in rock salt require that percolation occurred at porosities considerably below the static threshold due to deformation-assisted percolation. Therefore, the design of nuclear waste repositories in salt should guard against deformation-driven fluid percolation. In general, static percolation thresholds may not always limit fluid flow in deforming environments. PMID:26612949
Continuum percolation of carbon nanotubes in polymeric and colloidal media
Kyrylyuk, Andriy V.; van der Schoot, Paul
2008-01-01
We apply continuum connectedness percolation theory to realistic carbon nanotube systems and predict how bending flexibility, length polydispersity, and attractive interactions between them influence the percolation threshold, demonstrating that it can be used as a predictive tool for designing nanotube-based composite materials. We argue that the host matrix in which the nanotubes are dispersed controls this threshold through the interactions it induces between them during processing and through the degree of connectedness that must be set by the tunneling distance of electrons, at least in the context of conductivity percolation. This provides routes to manipulate the percolation threshold and the level of conductivity in the final product. We find that the percolation threshold of carbon nanotubes is very sensitive to the degree of connectedness, to the presence of small quantities of longer rods, and to very weak attractive interactions between them. Bending flexibility or tortuosity, on the other hand, has only a fairly weak impact on the percolation threshold. PMID:18550818
NASA Astrophysics Data System (ADS)
Burnley, P. C.
2014-12-01
Percolation theory is used to describe the behavior of a large number of disordered systems including the passage of fluid through porous materials, the spread of forest fires, and the mechanical behavior of granular materials. By virtue of both variations in elastic and plastic properties between different rock forming minerals as well as the plastic and elastic anisotropy of individual mineral grains, polycrystalline rocks are elastically and plastically disordered systems. Using 2D finite element models I have shown that stress transmission in rocks can also be described as a percolation problem and that the modulation of stress states within a rock can in some cases, reach levels comparable to the differential load on the rock. The presence of such modulations in the internal stress state of a rock has many implications for understanding how the rock's rheology arises from the rheology of its constituent crystals. A first order result of stress percolation is the formation of shear localization. Depending on the degree of mechanical heterogeneity of the rock's mechanical components (including grain interiors and grain boundaries), the nature of the shear localization may be highly concentrated - and therefore observable or widely distributed and "cryptic" in nature. The modulations in stress states created by stress percolation create small regions (yield nuclei) distributed throughout the rock that yield well before the bulk of the rock has reached the yield criterion. Local yielding leads to percolation of yielded regions and shear localization. Whether the shear localization remains cryptic or is observable by virtue of the development of large offsets, is a function of the density and distribution of yield nuclei. The spatial distribution of yield nuclei is a function of the nature of the stress percolation pattern, the variation in yield strength of the mechanical components and their spatial distribution. The presence of shear localization changes the
Annotated Bibliography of EDGE2D Use
J.D. Strachan and G. Corrigan
2005-06-24
This annotated bibliography is intended to help EDGE2D users, and particularly new users, find existing published literature that has used EDGE2D. Our idea is that a person can find existing studies which may relate to his intended use, as well as gain ideas about other possible applications by scanning the attached tables.
Staring 2-D hadamard transform spectral imager
Gentry, Stephen M.; Wehlburg, Christine M.; Wehlburg, Joseph C.; Smith, Mark W.; Smith, Jody L.
2006-02-07
A staring imaging system inputs a 2D spatial image containing multi-frequency spectral information. This image is encoded in one dimension of the image with a cyclic Hadamarid S-matrix. The resulting image is detecting with a spatial 2D detector; and a computer applies a Hadamard transform to recover the encoded image.
Crossover from percolation to self-organized criticality
NASA Astrophysics Data System (ADS)
Drossel, Barbara; Clar, Siegfried; Schwabl, Franz
1994-10-01
We include immunity against fire into the self-organized critical forest-fire model. When the immunity assumes a critical value, clusters of burnt trees are identical to percolation clusters of random bond percolation. As long as the immunity is below its critical value, the asymptotic critical exponents are those of the original self-organized critical model, i.e., the system performs a crossover from percolation to self-organized criticality. We present a scaling theory and computer simulation results.
Connectedness Percolation of Elongated Hard Particles in an External Field
NASA Astrophysics Data System (ADS)
Otten, Ronald H. J.; van der Schoot, Paul
2012-02-01
A theory is presented of how orienting fields and steric interactions conspire against the formation of a percolating network of, in some sense, connected elongated colloidal particles in fluid dispersions. We find that the network that forms above a critical loading breaks up again at higher loadings due to interaction-induced enhancement of the particle alignment. Upon approach of the percolation threshold, the cluster dimensions diverge with the same critical exponent parallel and perpendicular to the field direction, implying that connectedness percolation is not in the universality class of directed percolation.
Connectedness percolation of elongated hard particles in an external field.
Otten, Ronald H J; van der Schoot, Paul
2012-02-24
A theory is presented of how orienting fields and steric interactions conspire against the formation of a percolating network of, in some sense, connected elongated colloidal particles in fluid dispersions. We find that the network that forms above a critical loading breaks up again at higher loadings due to interaction-induced enhancement of the particle alignment. Upon approach of the percolation threshold, the cluster dimensions diverge with the same critical exponent parallel and perpendicular to the field direction, implying that connectedness percolation is not in the universality class of directed percolation. PMID:22463580
Epidemic Percolation Networks, Epidemic Outcomes, and Interventions
Kenah, Eben; Miller, Joel C.
2011-01-01
Epidemic percolation networks (EPNs) are directed random networks that can be used to analyze stochastic “Susceptible-Infectious-Removed” (SIR) and “Susceptible-Exposed-Infectious-Removed” (SEIR) epidemic models, unifying and generalizing previous uses of networks and branching processes to analyze mass-action and network-based S(E)IR models. This paper explains the fundamental concepts underlying the definition and use of EPNs, using them to build intuition about the final outcomes of epidemics. We then show how EPNs provide a novel and useful perspective on the design of vaccination strategies.
Percolation Theory and Modern Hydraulic Fracturing
NASA Astrophysics Data System (ADS)
Norris, J. Q.; Turcotte, D. L.; Rundle, J. B.
2015-12-01
During the past few years, we have been developing a percolation model for fracking. This model provides a powerful tool for understanding the growth and properties of the complex fracture networks generated during a modern high volume hydraulic fracture stimulations of tight shale reservoirs. The model can also be used to understand the interaction between the growing fracture network and natural reservoir features such as joint sets and faults. Additionally, the model produces a power-law distribution of bursts which can easily be compared to observed microseismicity.
Epidemic percolation networks, epidemic outcomes, and interventions.
Kenah, Eben; Miller, Joel C
2011-01-01
Epidemic percolation networks (EPNs) are directed random networks that can be used to analyze stochastic "Susceptible-Infectious-Removed" (SIR) and "Susceptible-Exposed-Infectious-Removed" (SEIR) epidemic models, unifying and generalizing previous uses of networks and branching processes to analyze mass-action and network-based S(E)IR models. This paper explains the fundamental concepts underlying the definition and use of EPNs, using them to build intuition about the final outcomes of epidemics. We then show how EPNs provide a novel and useful perspective on the design of vaccination strategies. PMID:21437002
Tree structure of a percolating Universe.
Colombi, S; Pogosyan, D; Souradeep, T
2000-12-25
We present a numerical study of topological descriptors of initially Gaussian and scale-free density perturbations evolving via gravitational instability in an expanding Universe. The measured Euler number of the excursion set at the percolation threshold, delta(c), is positive and nearly equal to the number of isolated components, suggesting that these structures are trees. Our study of critical point counts reconciles the clumpy appearance of the density field at delta(c) with measured filamentary local curvature. In the Gaussian limit, we measure delta(c)>sigma, where sigma2 is the variance of the density field. PMID:11136035
Debbarma, Rousan; Behura, Sanjay; Nguyen, Phong; Sreeprasad, T S; Berry, Vikas
2016-04-01
Percolating network of mixed 2D nanomaterials (2DNs) can leverage the unique electronic structures of different 2DNs, their interfacial doping, manipulable conduction pathways, and local traps. Here, we report on the percolation mechanism and electro-capacitive transport pathways of mixed-platelet network of hexagonal boron nitride (hBN) and reduced graphene oxide (rGO), two isostructural and isoelectronic 2DNs. The transport mechanism is explained in terms of electron hopping through isolated hBN defect traps between rGO (possibly via electron tunneling/hopping through "funneling" points). With optical bandgaps of 4.57 and 4.08 eV for the hBN-domains and 2.18 eV for the rGO domains, the network of hBN with rGO exhibits Poole-Frenkel emission-based transport with mean hopping gap of 1.12 nm (∼hBN trilayer) and an activation barrier of ∼15 ± 0.7 meV. Further, hBN (1.7 pF) has a 6-fold lower capacitance than 1:1 hBN:rGO, which has a resistance 2 orders of magnitude higher than that of rGO (1.46 MΩ). These carrier transport results can be applied to other multi-2DN networks for development of next-generation functional 2D-devices. PMID:27002378
Light field morphing using 2D features.
Wang, Lifeng; Lin, Stephen; Lee, Seungyong; Guo, Baining; Shum, Heung-Yeung
2005-01-01
We present a 2D feature-based technique for morphing 3D objects represented by light fields. Existing light field morphing methods require the user to specify corresponding 3D feature elements to guide morph computation. Since slight errors in 3D specification can lead to significant morphing artifacts, we propose a scheme based on 2D feature elements that is less sensitive to imprecise marking of features. First, 2D features are specified by the user in a number of key views in the source and target light fields. Then the two light fields are warped view by view as guided by the corresponding 2D features. Finally, the two warped light fields are blended together to yield the desired light field morph. Two key issues in light field morphing are feature specification and warping of light field rays. For feature specification, we introduce a user interface for delineating 2D features in key views of a light field, which are automatically interpolated to other views. For ray warping, we describe a 2D technique that accounts for visibility changes and present a comparison to the ideal morphing of light fields. Light field morphing based on 2D features makes it simple to incorporate previous image morphing techniques such as nonuniform blending, as well as to morph between an image and a light field. PMID:15631126
2D materials for nanophotonic devices
NASA Astrophysics Data System (ADS)
Xu, Renjing; Yang, Jiong; Zhang, Shuang; Pei, Jiajie; Lu, Yuerui
2015-12-01
Two-dimensional (2D) materials have become very important building blocks for electronic, photonic, and phononic devices. The 2D material family has four key members, including the metallic graphene, transition metal dichalcogenide (TMD) layered semiconductors, semiconducting black phosphorous, and the insulating h-BN. Owing to the strong quantum confinements and defect-free surfaces, these atomically thin layers have offered us perfect platforms to investigate the interactions among photons, electrons and phonons. The unique interactions in these 2D materials are very important for both scientific research and application engineering. In this talk, I would like to briefly summarize and highlight the key findings, opportunities and challenges in this field. Next, I will introduce/highlight our recent achievements. We demonstrated atomically thin micro-lens and gratings using 2D MoS2, which is the thinnest optical component around the world. These devices are based on our discovery that the elastic light-matter interactions in highindex 2D materials is very strong. Also, I would like to introduce a new two-dimensional material phosphorene. Phosphorene has strongly anisotropic optical response, which creates 1D excitons in a 2D system. The strong confinement in phosphorene also enables the ultra-high trion (charged exciton) binding energies, which have been successfully measured in our experiments. Finally, I will briefly talk about the potential applications of 2D materials in energy harvesting.
Inertial solvation in femtosecond 2D spectra
NASA Astrophysics Data System (ADS)
Hybl, John; Albrecht Ferro, Allison; Farrow, Darcie; Jonas, David
2001-03-01
We have used 2D Fourier transform spectroscopy to investigate polar solvation. 2D spectroscopy can reveal molecular lineshapes beneath ensemble averaged spectra and freeze molecular motions to give an undistorted picture of the microscopic dynamics of polar solvation. The transition from "inhomogeneous" to "homogeneous" 2D spectra is governed by both vibrational relaxation and solvent motion. Therefore, the time dependence of the 2D spectrum directly reflects the total response of the solvent-solute system. IR144, a cyanine dye with a dipole moment change upon electronic excitation, was used to probe inertial solvation in methanol and propylene carbonate. Since the static Stokes' shift of IR144 in each of these solvents is similar, differences in the 2D spectra result from solvation dynamics. Initial results indicate that the larger propylene carbonate responds more slowly than methanol, but appear to be inconsistent with rotational estimates of the inertial response. To disentangle intra-molecular vibrations from solvent motion, the 2D spectra of IR144 will be compared to the time-dependent 2D spectra of the structurally related nonpolar cyanine dye HDITCP.
Internal Photoemission Spectroscopy of 2-D Materials
NASA Astrophysics Data System (ADS)
Nguyen, Nhan; Li, Mingda; Vishwanath, Suresh; Yan, Rusen; Xiao, Shudong; Xing, Huili; Cheng, Guangjun; Hight Walker, Angela; Zhang, Qin
Recent research has shown the great benefits of using 2-D materials in the tunnel field-effect transistor (TFET), which is considered a promising candidate for the beyond-CMOS technology. The on-state current of TFET can be enhanced by engineering the band alignment of different 2D-2D or 2D-3D heterostructures. Here we present the internal photoemission spectroscopy (IPE) approach to determine the band alignments of various 2-D materials, in particular SnSe2 and WSe2, which have been proposed for new TFET designs. The metal-oxide-2-D semiconductor test structures are fabricated and characterized by IPE, where the band offsets from the 2-D semiconductor to the oxide conduction band minimum are determined by the threshold of the cube root of IPE yields as a function of photon energy. In particular, we find that SnSe2 has a larger electron affinity than most semiconductors and can be combined with other semiconductors to form near broken-gap heterojunctions with low barrier heights which can produce a higher on-state current. The details of data analysis of IPE and the results from Raman spectroscopy and spectroscopic ellipsometry measurements will also be presented and discussed.
ERIC Educational Resources Information Center
Lightbody, Mary
2008-01-01
Invasive species, commonly known as "invasives," are nonnative plants, animals, and microbes that completely take over and change an established ecosystem. The consequences of invasives' spread are significant. In fact, many of the species that appear on the Endangered Species list are threatened by invasives. Therefore, the topic of invasive…
Percolating plasmonic networks for light emission control.
Gaio, Michele; Castro-Lopez, Marta; Renger, Jan; van Hulst, Niek; Sapienza, Riccardo
2015-01-01
Optical nanoantennas have revolutionised the way we manipulate single photons emitted by individual light sources in a nanostructured photonic environment. Complex plasmonic architectures allow for multiscale light control by shortening or stretching the light wavelength for a fixed operating frequency, meeting the size of the emitter and that of propagating modes. Here, we study self-assembled semi-continuous gold films and lithographic gold networks characterised by large local density of optical state (LDOS) fluctuations around the electrical percolation threshold, a regime where the surface is characterised by large metal clusters with fractal topology. We study the formation of plasmonic networks and their effect on light emission from embedded fluorescent probes in these systems. Through fluorescence dynamics experiments we discuss the role of global long-range interactions linked to the degree of percolation and to the network fractality, as well as the local near-field contributions coming from the local electro-magnetic fields and the topology. Our experiments indicate that local properties dominate the fluorescence modification. PMID:25711923
Reionization through the lens of percolation theory
NASA Astrophysics Data System (ADS)
Furlanetto, Steven R.; Oh, S. Peng
2016-04-01
The reionization of intergalactic hydrogen has received intense theoretical scrutiny over the past two decades. Here, we approach the process formally as a percolation process and phase transition. Using semi-numeric simulations, we demonstrate that an infinitely large ionized region abruptly appears at an ionized fraction of xi ≈ 0.1 and quickly grows to encompass most of the ionized gas: by xi ˜ 0.3, nearly 90 per cent of the ionized material is part of this region. Throughout most of reionization, nearly all of the intergalactic medium is divided into just two regions, one ionized and one neutral, and both infinite in extent. We also show that the discrete ionized regions that exist before and near this transition point follow a near-power-law distribution in volume, with equal contributions to the total filling factor per logarithmic interval in size up to a sharp cutoff in volume. These qualities are generic to percolation processes, with the detailed behaviour a result of long-range correlations in the underlying density field. These insights will be crucial to understanding the distribution of ionized and neutral gas during reionization and provide precise meaning to the intuitive description of reionization as an `overlap' process.
Spectral Dimension of a Percolation Network
NASA Astrophysics Data System (ADS)
Rudra, Jayanta
2005-03-01
While the fractal dimension df describes the self-similar static nature of the lattice, the spectral dimension ds dictates the dynamic properties on it. Alexander and Orbach^1 conjectured that the spectral dimension might be exactly 4/3 for percolation networks with embedding euclidian dimension de >= 2. Recent numerical simulations^2, however, could not decisively prove or disprove this conjecture, although there are other indirect evidences that it is true. We believe that the failure of the simulations to decisively check the validity of the conjecture is due to the non-stochastic nature of the methods. Most of these simulations are Monte Carlo Methods based on a random-walk model and, in spite of very large number of walks on huge lattices, the results do not reach the satisfactory level. In this work we apply a stochastic approach^3 to determine the spectral dimension of percolation network for de >= 2 and check the validity of the Alexander-Orbach-conjecture. Due to its stochastic nature this method is numerically superior and more accurate than the conventional Monte Carlo simulations. References: 1. S. Alexander and R. Orbach, J. Phys. Lett. (Paris) 43 (1982) L625. 2. N. Pitsianis, G. Bleris and P. Argyrakis, Phys. Rev. B 39 (1989) 7097. 3. J. Rudra and J. Kozak, Phys. Lett A 151 (1990) 429.
Percolation experiments in complex fractal media
NASA Astrophysics Data System (ADS)
Redondo, Jose Manuel; Tarquis, Ana Maria; Cherubini, Claudia; Lopez Gzlez-Nieto, Pilar; Vila, Teresa
2013-04-01
Series of flow percolation experiments under gravity were performed in different glass model and real karstic media samples. We present a multifractal characterization of the experiments in several parametric non-dimensional flow descriptors. Using the maximum local multifractal dimension as an additional flow indicator. Also experiments on Non laminar flow and transport conditions in fractured and karstified media were performed at Bari. The investigation on hypothesis of non linear flow and non fickian transport in fractured aquifers led to a distinction on the different role of channels and microchannels and of the presence of vortices and eddy trapping. The dominance of the elongated channels produced early arrival times, with the solute traveling along the high velocity channel network. On the other hand in a lumped structured karstic media, the percolation flow produced long tails with local Eddy mixing, entrapment in eddies, and slow flow out of the eddies. In The laboratory experiments performed in Madrid and in DAMTP Cambridge the role of the initial pressure produced fractal pathway structures even in iniatilly uniform ballotini substrates.
Explosive percolation transitions in growing networks
NASA Astrophysics Data System (ADS)
Oh, S. M.; Son, S.-W.; Kahng, B.
2016-03-01
Recent extensive studies of the explosive percolation (EP) model revealed that the EP transition is second order with an extremely small value of the critical exponent β associated with the order parameter. This result was obtained from static networks, in which the number of nodes in the system remains constant during the evolution of the network. However, explosive percolating behavior of the order parameter can be observed in social networks, which are often growing networks, where the number of nodes in the system increases as dynamics proceeds. However, extensive studies of the EP transition in such growing networks are still missing. Here we study the nature of the EP transition in growing networks by extending an existing growing network model to a general case in which m node candidates are picked up in the Achiloptas process. When m =2 , this model reduces to the existing model, which undergoes an infinite-order transition. We show that when m ≥3 , the transition becomes second order due to the suppression effect against the growth of large clusters. Using the rate-equation approach and performing numerical simulations, we also show that the exponent β decreases algebraically with increasing m , whereas it does exponentially in a corresponding static random network model. Finally, we find that the hyperscaling relations hold but in different forms.
Electron Percolation In Copper Infiltrated Carbon
NASA Astrophysics Data System (ADS)
Krcho, Stanislav
2015-11-01
The work describes the dependence of the electrical conductivity of carbon materials infiltrated with copper in a vacuum-pressure autoclave on copper concentration and on the effective pore radius of the carbon skeleton. In comparison with non-infiltrated material the electrical conductivity of copper infiltrated composite increased almost 500 times. If the composite contained less than 7.2 vol% of Cu, a linear dependence of the electrical conductivity upon cupper content was observed. If infiltrated carbon contained more than 7.2 vol% of Cu, the dependence was nonlinear - the curve could be described by a power formula (x - xc)t. This is a typical formula describing the electron percolation process in regions containing higher Cu fraction than the critical one. The maximum measured electrical conductivity was 396 × 104 Ω-1 m-1 for copper concentration 27.6 vol%. Experiments and analysis of the electrical conductivity showed that electron percolation occurred in carbon materials infiltrated by copper when the copper volume exceeded the critical concentration. The analysis also showed a sharp increase of electrical conductivity in composites with copper concentration higher than the threshold, where the effective radius of carbon skeleton pores decreased to 350 nanometres.
Novel percolation transitions and coupled catastrophes
NASA Astrophysics Data System (ADS)
D'Souza, Raissa
Collections of interdependent networks are at the core of modern society, spanning physical, biological and social systems. Simple mathematical models of the structure and function of networks can provide important insights into real-world systems, enhancing our ability to steer and control them. Here our focus is on abrupt changes in networks, due both to phase transitions and to jumping between bi-stable equilibria. We begin with an overview of novel classes of percolation phase transitions that result from repeated, small interventions intended to delay the transition. These new phenomena allow us to extend percolation approaches to modular networks, Brownian motion, and cluster growth dynamics. We then focus on abrupt transitions due to a system jumping between bi-stable equilibria, modeled as a cusp catastrophe in nonlinear dynamics. We show that when systems that each undergo a cusp catastrophe interact, we can observe a new phenomena of catastrophe-hopping leading to non-local cascading failures. Here an intermediate system facilitates the propagation of a sudden change or collapse, and we show that catastrophe hopping is consistent with the outbreak of protests observed during the Arab Spring of 2011.
Percolation on bipartite scale-free networks
NASA Astrophysics Data System (ADS)
Hooyberghs, H.; Van Schaeybroeck, B.; Indekeu, J. O.
2010-08-01
Recent studies introduced biased (degree-dependent) edge percolation as a model for failures in real-life systems. In this work, such process is applied to networks consisting of two types of nodes with edges running only between nodes of unlike type. Such bipartite graphs appear in many social networks, for instance in affiliation networks and in sexual-contact networks in which both types of nodes show the scale-free characteristic for the degree distribution. During the depreciation process, an edge between nodes with degrees k and q is retained with a probability proportional to (, where α is positive so that links between hubs are more prone to failure. The removal process is studied analytically by introducing a generating functions theory. We deduce exact self-consistent equations describing the system at a macroscopic level and discuss the percolation transition. Critical exponents are obtained by exploiting the Fortuin-Kasteleyn construction which provides a link between our model and a limit of the Potts model.
Percolation effect in thick film superconductors
Sali, R.; Harsanyi, G.
1994-12-31
A thick film superconductor paste has been developed to study the properties of granulated superconductor materials, to observe the percolation effect and to confirm the theory of the conducting mechanism in the superconducting thick films. This paste was also applied to make a superconducting planar transformer. Due to high T{sub c} and advantageous current density properties the base of the paste was chosen to be of Bi(Pb)SrCaCuO system. For contacts a conventional Ag/Pt paste was used. The critical temperature of the samples were between 110 K and 115 K depending on the printed layer thickness. The critical current density at the boiling temperature of the liquid He- was between 200-300 A/cm{sup 2}. The R(T) and V(I) functions were measured with different parameters. The results of the measurements have confirmed the theory of conducting mechanism in the material. The percolation structure model has been built and described. As an application, a superconducting planar thick film transformer was planned and produced. Ten windings of the transformer were printed on one side of the alumina substrate and one winding was printed on the other side. The coupling between the two sides was possible through the substrate. The samples did not need special drying and firing parameters. After the preparation, the properties of the transformer were measured. The efficiency and the losses were determined. Finally, some fundamental advantages and problems of the process were discussed.
Explosive percolation transitions in growing networks.
Oh, S M; Son, S-W; Kahng, B
2016-03-01
Recent extensive studies of the explosive percolation (EP) model revealed that the EP transition is second order with an extremely small value of the critical exponent β associated with the order parameter. This result was obtained from static networks, in which the number of nodes in the system remains constant during the evolution of the network. However, explosive percolating behavior of the order parameter can be observed in social networks, which are often growing networks, where the number of nodes in the system increases as dynamics proceeds. However, extensive studies of the EP transition in such growing networks are still missing. Here we study the nature of the EP transition in growing networks by extending an existing growing network model to a general case in which m node candidates are picked up in the Achiloptas process. When m = 2, this model reduces to the existing model, which undergoes an infinite-order transition. We show that when m ≥ 3, the transition becomes second order due to the suppression effect against the growth of large clusters. Using the rate-equation approach and performing numerical simulations, we also show that the exponent β decreases algebraically with increasing m, whereas it does exponentially in a corresponding static random network model. Finally, we find that the hyperscaling relations hold but in different forms. PMID:27078375
Compact directed percolation with movable partial reflectors
NASA Astrophysics Data System (ADS)
Dickman, Ronald; ben-Avraham, Daniel
2002-09-01
We study a version of compact directed percolation (CDP) in one dimension in which occupation of a site for the first time requires that a 'mine' or an antiparticle be eliminated. This process is analogous to the variant of directed percolation with a long-time memory, proposed by Grassberger et al (1997 Phys. Rev. E 55 2488) in order to understand spreading at a critical point involving an infinite number of absorbing configurations. The problem is equivalent to that of a pair of random walkers in the presence of movable partial reflectors. The walkers, which are unbiased, start one lattice spacing apart and annihilate on their first contact. Each time one of the walkers tries to visit a new site, it is reflected (with probability r) back to its previous position, while the reflector is simultaneously pushed one step away from the walker. Iteration of the discrete-time evolution equation for the probability distribution yields the survival probability S(t). We find that S(t) ~ t-δ, with δ varying continuously between 1/2 and 1.160 as the reflection probability varies between 0 and 1.
Brittle damage models in DYNA2D
Faux, D.R.
1997-09-01
DYNA2D is an explicit Lagrangian finite element code used to model dynamic events where stress wave interactions influence the overall response of the system. DYNA2D is often used to model penetration problems involving ductile-to-ductile impacts; however, with the advent of the use of ceramics in the armor-anti-armor community and the need to model damage to laser optics components, good brittle damage models are now needed in DYNA2D. This report will detail the implementation of four brittle damage models in DYNA2D, three scalar damage models and one tensor damage model. These new brittle damage models are then used to predict experimental results from three distinctly different glass damage problems.
Ginsparg, P.
1991-01-01
These are introductory lectures for a general audience that give an overview of the subject of matrix models and their application to random surfaces, 2d gravity, and string theory. They are intentionally 1.5 years out of date.
Ginsparg, P.
1991-12-31
These are introductory lectures for a general audience that give an overview of the subject of matrix models and their application to random surfaces, 2d gravity, and string theory. They are intentionally 1.5 years out of date.
2D electronic materials for army applications
NASA Astrophysics Data System (ADS)
O'Regan, Terrance; Perconti, Philip
2015-05-01
The record electronic properties achieved in monolayer graphene and related 2D materials such as molybdenum disulfide and hexagonal boron nitride show promise for revolutionary high-speed and low-power electronic devices. Heterogeneous 2D-stacked materials may create enabling technology for future communication and computation applications to meet soldier requirements. For instance, transparent, flexible and even wearable systems may become feasible. With soldier and squad level electronic power demands increasing, the Army is committed to developing and harnessing graphene-like 2D materials for compact low size-weight-and-power-cost (SWAP-C) systems. This paper will review developments in 2D electronic materials at the Army Research Laboratory over the last five years and discuss directions for future army applications.
2-d Finite Element Code Postprocessor
1996-07-15
ORION is an interactive program that serves as a postprocessor for the analysis programs NIKE2D, DYNA2D, TOPAZ2D, and CHEMICAL TOPAZ2D. ORION reads binary plot files generated by the two-dimensional finite element codes currently used by the Methods Development Group at LLNL. Contour and color fringe plots of a large number of quantities may be displayed on meshes consisting of triangular and quadrilateral elements. ORION can compute strain measures, interface pressures along slide lines, reaction forcesmore » along constrained boundaries, and momentum. ORION has been applied to study the response of two-dimensional solids and structures undergoing finite deformations under a wide variety of large deformation transient dynamic and static problems and heat transfer analyses.« less
Chemical Approaches to 2D Materials.
Samorì, Paolo; Palermo, Vincenzo; Feng, Xinliang
2016-08-01
Chemistry plays an ever-increasing role in the production, functionalization, processing and applications of graphene and other 2D materials. This special issue highlights a selection of enlightening chemical approaches to 2D materials, which nicely reflect the breadth of the field and convey the excitement of the individuals involved in it, who are trying to translate graphene and related materials from the laboratory into a real, high-impact technology. PMID:27478083
Electrically Percolating Clusters in Sheared Carbon Nanotube Composites
NASA Astrophysics Data System (ADS)
Migler, Kalman; Moon, Doyoung; Obrzut, Jan; Douglas, Jack; Lam, Thomas; Sharma, Renu; Liddle, Alex James
2013-03-01
The electrical conductivity of polymer nanotube composites can be dramatically modified by processing flows and subsequent annealing. The mechanism is widely believed to be nanotube structural rearrangements that occur during flow and alter the percolating pathways. We seek to directly visualize these flow-induced three-dimensional percolating clusters through three-dimensional confocal microscopy and image analysis.
Extended 2D generalized dilaton gravity theories
NASA Astrophysics Data System (ADS)
de Mello, R. O.
2008-09-01
We show that an anomaly-free description of matter in (1+1) dimensions requires a deformation of the 2D relativity principle, which introduces a non-trivial centre in the 2D Poincaré algebra. Then we work out the reduced phase space of the anomaly-free 2D relativistic particle, in order to show that it lives in a noncommutative 2D Minkowski space. Moreover, we build a Gaussian wave packet to show that a Planck length is well defined in two dimensions. In order to provide a gravitational interpretation for this noncommutativity, we propose to extend the usual 2D generalized dilaton gravity models by a specific Maxwell component, which guages the extra symmetry associated with the centre of the 2D Poincaré algebra. In addition, we show that this extension is a high energy correction to the unextended dilaton theories that can affect the topology of spacetime. Further, we couple a test particle to the general extended dilaton models with the purpose of showing that they predict a noncommutativity in curved spacetime, which is locally described by a Moyal star product in the low energy limit. We also conjecture a probable generalization of this result, which provides strong evidence that the noncommutativity is described by a certain star product which is not of the Moyal type at high energies. Finally, we prove that the extended dilaton theories can be formulated as Poisson Sigma models based on a nonlinear deformation of the extended Poincaré algebra.
Charge percolation pathways guided by defects in quantum dot solids.
Zhang, Yingjie; Zherebetskyy, Danylo; Bronstein, Noah D; Barja, Sara; Lichtenstein, Leonid; Schuppisser, David; Wang, Lin-Wang; Alivisatos, A Paul; Salmeron, Miquel
2015-05-13
Charge hopping and percolation in quantum dot (QD) solids has been widely studied, but the microscopic nature of the percolation process is not understood or determined. Here we present the first imaging of the charge percolation pathways in two-dimensional PbS QD arrays using Kelvin probe force microscopy (KPFM). We show that under dark conditions electrons percolate via in-gap states (IGS) instead of the conduction band, while holes percolate via valence band states. This novel transport behavior is explained by the electronic structure and energy level alignment of the individual QDs, which was measured by scanning tunneling spectroscopy (STS). Chemical treatments with hydrazine can remove the IGS, resulting in an intrinsic defect-free semiconductor, as revealed by STS and surface potential spectroscopy. The control over IGS can guide the design of novel electronic devices with impurity conduction, and photodiodes with controlled doping. PMID:25844919
Percolation in one of q colors near criticality
NASA Astrophysics Data System (ADS)
Qian, Xiaofeng; Deng, Youjin; Blöte, Henk W. J.
2005-04-01
We study bond percolation in two dimensions between random site variables having one out of q colors, using transfer-matrix and Monte Carlo techniques. We determine the percolation threshold as a function of the Potts temperature T in the disordered Potts range Tc⩽T<∞ for several q -state Potts Hamiltonians. For high T , these transitions fit, irrespective of q , in the universality class of the ordinary percolation transitions. However, for T↓Tc , q -dependent crossover phenomena appear. The topology of the phase diagram changes in a qualitative sense at q=2 . For q<2 the Potts critical state appears to enhance percolation, for q>2 it appears to suppress it. Remarkably, for q=2 the percolation line coincides with the only flow line extending to T>Tc from the critical fixed point associated with Potts clusters.
Clarification of the Bootstrap Percolation Paradox
NASA Astrophysics Data System (ADS)
de Gregorio, Paolo; Lawlor, Aonghus; Bradley, Phil; Dawson, Kenneth A.
2004-07-01
We study the onset of the bootstrap percolation transition as a model of generalized dynamical arrest. Our results apply to two dimensions, but there is no significant barrier to extending them to higher dimensionality. We develop a new importance-sampling procedure in simulation, based on rare events around “holes”, that enables us to access bootstrap lengths beyond those previously studied. By framing a new theory in terms of paths or processes that lead to emptying of the lattice we are able to develop systematic corrections to the existing theory and compare them to simulations. Thereby, for the first time in the literature, it is possible to obtain credible comparisons between theory and simulation in the accessible density range.
Percolation and permeability of heterogeneous fracture networks
NASA Astrophysics Data System (ADS)
Adler, Pierre; Mourzenko, Valeri; Thovert, Jean-François
2013-04-01
Natural fracture fields are almost necessarily heterogeneous with a fracture density varying with space. Two classes of variations are quite frequent. In the first one, the fracture density is decreasing from a given surface; the fracture density is usually (but not always see [1]) an exponential function of depth as it has been shown by many measurements. Another important example of such an exponential decrease consists of the Excavated Damaged Zone (EDZ) which is created by the excavation process of a gallery [2,3]. In the second one, the fracture density undergoes some local random variations around an average value. This presentation is mostly focused on the first class and numerical samples are generated with an exponentially decreasing density from a given plane surface. Their percolation status and hydraulic transmissivity can be calculated by the numerical codes which are detailed in [4]. Percolation is determined by a pseudo diffusion algorithm. Flow determination necessitates the meshing of the fracture networks and the discretisation of the Darcy equation by a finite volume technique; the resulting linear system is solved by a conjugate gradient algorithm. Only the flow properties of the EDZ along the directions which are parallel to the wall are of interest when a pressure gradient parallel to the wall is applied. The transmissivity T which relates the total flow rate per unit width Q along the wall through the whole fractured medium to the pressure gradient grad p, is defined by Q = - T grad p/mu where mu is the fluid viscosity. The percolation status and hydraulic transmissivity are systematically determined for a wide range of decay lengths and anisotropy parameters. They can be modeled by comparison with anisotropic fracture networks with a constant density. A heuristic power-law model is proposed which accurately describes the results for the percolation threshold over the whole investigated range of heterogeneity and anisotropy. Then, the data
Percolation of localized attack on complex networks
NASA Astrophysics Data System (ADS)
Shao, Shuai; Huang, Xuqing; Stanley, H. Eugene; Havlin, Shlomo
2015-02-01
The robustness of complex networks against node failure and malicious attack has been of interest for decades, while most of the research has focused on random attack or hub-targeted attack. In many real-world scenarios, however, attacks are neither random nor hub-targeted, but localized, where a group of neighboring nodes in a network are attacked and fail. In this paper we develop a percolation framework to analytically and numerically study the robustness of complex networks against such localized attack. In particular, we investigate this robustness in Erdős-Rényi networks, random-regular networks, and scale-free networks. Our results provide insight into how to better protect networks, enhance cybersecurity, and facilitate the design of more robust infrastructures.
Percolation of Blast Waves though Sand
NASA Astrophysics Data System (ADS)
Proud, William
2013-06-01
Previous research has concentrated on the physical processes occurring when samples of sand, of varying moisture content, were shock compressed. In this study quartz sand samples are subjected to blast waves over a range of pressure and duration. Aspects of particle movement are discussed; the global movement of a bed hundreds of particles thick is a fraction of particle width. The main diagnostics used are pressure sensors and high-speed photography. Results are presented for a range of particle sizes, aspect ratio, density and moisture content. While the velocity of the percolation through the bed is primarily controlled by density and porosity the effect of moisture reveals a more complex dependence. The ISP acknowledges the support of the Atomic Weapons Establishment and Imperial College London.
A Percolation Model of the Streamer Discharges
NASA Astrophysics Data System (ADS)
Sasaki, Akira; Kato, Susumu; Takahashi, Eiichi; Kanazawa, Seiji
A percolation model of discharge is presented. The model can reproduce stochastic behaviors of initial partial discharge to the growth of a stepped leader. The model uses macroscopic cells, from which a network of electric circuits is defined, and the spatial and temporal evolutions of the electric field and current in the discharge medium are calculated. For each cell, one of two states, either insulator or conductor, which corresponds to neutral gas or ionized plasmas, respectively, is decided. The decision is made on the basis of probability for each calculation cell at each time step, taking the effects of local electric field and current, which enhance ionization and sustain the discharge channel, respectively, into account.
Explosive Percolation with Multiple Giant Components
NASA Astrophysics Data System (ADS)
Chen, Wei; D'Souza, Raissa M.
2011-03-01
We generalize the random graph evolution process of Bohman, Frieze, and Wormald [T. Bohman, A. Frieze, and N. C. Wormald, Random Struct. AlgorithmsRSALFD1042-983210.1002/rsa.20038, 25, 432 (2004)]. Potential edges, sampled uniformly at random from the complete graph, are considered one at a time and either added to the graph or rejected provided that the fraction of accepted edges is never smaller than a decreasing function asymptotically approaching the value α=1/2. We show that multiple giant components appear simultaneously in a strongly discontinuous percolation transition and remain distinct. Furthermore, tuning the value of α determines the number of such components with smaller α leading to an increasingly delayed and more explosive transition. The location of the critical point and strongly discontinuous nature are not affected if only edges which span components are sampled.
Temporal percolation of a susceptible adaptive network
NASA Astrophysics Data System (ADS)
Valdez, L. D.; Macri, P. A.; Braunstein, L. A.
2013-09-01
In the past decades, many authors have used the susceptible-infected-recovered model to study the impact of the disease spreading on the evolution of the infected individuals. However, few authors focused on the temporal unfolding of the susceptible individuals. In this paper, we study the dynamic of the susceptible-infected-recovered model in an adaptive network that mimics the transitory deactivation of permanent social contacts, such as friendship and work-ship ties. Using an edge-based compartmental model and percolation theory, we obtain the evolution equations for the fraction susceptible individuals in the susceptible biggest component. In particular, we focus on how the individual’s behavior impacts on the dilution of the susceptible network. We show that, as a consequence, the spreading of the disease slows down, protecting the biggest susceptible cluster by increasing the critical time at which the giant susceptible component is destroyed. Our theoretical results are fully supported by extensive simulations.
Optical modulators with 2D layered materials
NASA Astrophysics Data System (ADS)
Sun, Zhipei; Martinez, Amos; Wang, Feng
2016-04-01
Light modulation is an essential operation in photonics and optoelectronics. With existing and emerging technologies increasingly demanding compact, efficient, fast and broadband optical modulators, high-performance light modulation solutions are becoming indispensable. The recent realization that 2D layered materials could modulate light with superior performance has prompted intense research and significant advances, paving the way for realistic applications. In this Review, we cover the state of the art of optical modulators based on 2D materials, including graphene, transition metal dichalcogenides and black phosphorus. We discuss recent advances employing hybrid structures, such as 2D heterostructures, plasmonic structures, and silicon and fibre integrated structures. We also take a look at the future perspectives and discuss the potential of yet relatively unexplored mechanisms, such as magneto-optic and acousto-optic modulation.
Large Area Synthesis of 2D Materials
NASA Astrophysics Data System (ADS)
Vogel, Eric
Transition metal dichalcogenides (TMDs) have generated significant interest for numerous applications including sensors, flexible electronics, heterostructures and optoelectronics due to their interesting, thickness-dependent properties. Despite recent progress, the synthesis of high-quality and highly uniform TMDs on a large scale is still a challenge. In this talk, synthesis routes for WSe2 and MoS2 that achieve monolayer thickness uniformity across large area substrates with electrical properties equivalent to geological crystals will be described. Controlled doping of 2D semiconductors is also critically required. However, methods established for conventional semiconductors, such as ion implantation, are not easily applicable to 2D materials because of their atomically thin structure. Redox-active molecular dopants will be demonstrated which provide large changes in carrier density and workfunction through the choice of dopant, treatment time, and the solution concentration. Finally, several applications of these large-area, uniform 2D materials will be described including heterostructures, biosensors and strain sensors.
2D microwave imaging reflectometer electronics
Spear, A. G.; Domier, C. W. Hu, X.; Muscatello, C. M.; Ren, X.; Luhmann, N. C.; Tobias, B. J.
2014-11-15
A 2D microwave imaging reflectometer system has been developed to visualize electron density fluctuations on the DIII-D tokamak. Simultaneously illuminated at four probe frequencies, large aperture optics image reflections from four density-dependent cutoff surfaces in the plasma over an extended region of the DIII-D plasma. Localized density fluctuations in the vicinity of the plasma cutoff surfaces modulate the plasma reflections, yielding a 2D image of electron density fluctuations. Details are presented of the receiver down conversion electronics that generate the in-phase (I) and quadrature (Q) reflectometer signals from which 2D density fluctuation data are obtained. Also presented are details on the control system and backplane used to manage the electronics as well as an introduction to the computer based control program.
2D microwave imaging reflectometer electronics
NASA Astrophysics Data System (ADS)
Spear, A. G.; Domier, C. W.; Hu, X.; Muscatello, C. M.; Ren, X.; Tobias, B. J.; Luhmann, N. C.
2014-11-01
A 2D microwave imaging reflectometer system has been developed to visualize electron density fluctuations on the DIII-D tokamak. Simultaneously illuminated at four probe frequencies, large aperture optics image reflections from four density-dependent cutoff surfaces in the plasma over an extended region of the DIII-D plasma. Localized density fluctuations in the vicinity of the plasma cutoff surfaces modulate the plasma reflections, yielding a 2D image of electron density fluctuations. Details are presented of the receiver down conversion electronics that generate the in-phase (I) and quadrature (Q) reflectometer signals from which 2D density fluctuation data are obtained. Also presented are details on the control system and backplane used to manage the electronics as well as an introduction to the computer based control program.
2D microwave imaging reflectometer electronics.
Spear, A G; Domier, C W; Hu, X; Muscatello, C M; Ren, X; Tobias, B J; Luhmann, N C
2014-11-01
A 2D microwave imaging reflectometer system has been developed to visualize electron density fluctuations on the DIII-D tokamak. Simultaneously illuminated at four probe frequencies, large aperture optics image reflections from four density-dependent cutoff surfaces in the plasma over an extended region of the DIII-D plasma. Localized density fluctuations in the vicinity of the plasma cutoff surfaces modulate the plasma reflections, yielding a 2D image of electron density fluctuations. Details are presented of the receiver down conversion electronics that generate the in-phase (I) and quadrature (Q) reflectometer signals from which 2D density fluctuation data are obtained. Also presented are details on the control system and backplane used to manage the electronics as well as an introduction to the computer based control program. PMID:25430247
2D-Crystal-Based Functional Inks.
Bonaccorso, Francesco; Bartolotta, Antonino; Coleman, Jonathan N; Backes, Claudia
2016-08-01
The possibility to produce and process graphene, related 2D crystals, and heterostructures in the liquid phase makes them promising materials for an ever-growing class of applications as composite materials, sensors, in flexible optoelectronics, and energy storage and conversion. In particular, the ability to formulate functional inks with on-demand rheological and morphological properties, i.e., lateral size and thickness of the dispersed 2D crystals, is a step forward toward the development of industrial-scale, reliable, inexpensive printing/coating processes, a boost for the full exploitation of such nanomaterials. Here, the exfoliation strategies of graphite and other layered crystals are reviewed, along with the advances in the sorting of lateral size and thickness of the exfoliated sheets together with the formulation of functional inks and the current development of printing/coating processes of interest for the realization of 2D-crystal-based devices. PMID:27273554
... Invasive candidiasis is an infection caused by a yeast (a type of fungus) called Candida . Unlike Candida ... mouth and throat (also called “thrush”) or vaginal “yeast infections,” invasive candidiasis is a serious infection that ...
Percolation in binary and ternary mixtures of patchy colloids.
Seiferling, Felix; de Las Heras, Daniel; Telo da Gama, Margarida M
2016-08-21
We investigate percolation in binary and ternary mixtures of patchy colloidal particles theoretically and using Monte Carlo simulations. Each particle has three identical patches, with distinct species having different types of patch. Theoretically we assume tree-like clusters and calculate the bonding probabilities using Wertheim's first-order perturbation theory for association. For ternary mixtures, we find up to eight fundamentally different percolated states. The states differ in terms of the species and pairs of species that have percolated. The strongest gel is a trigel or tricontinuous gel, in which each of the three species has percolated. The weakest gel is a mixed gel in which all of the particles have percolated, but none of the species percolates by itself. The competition between entropy of mixing and internal energy of bonding determines the stability of each state. Theoretical and simulation results are in very good agreement. The only significant difference is the temperature at the percolation threshold, which is overestimated by the theory due to the absence of correlations between bonds in the theoretical description. PMID:27544122
Multiple percolation tunneling staircase in metal-semiconductor nanoparticle composites
Mukherjee, Rupam; Huang, Zhi-Feng; Nadgorny, Boris
2014-10-27
Multiple percolation transitions are observed in a binary system of RuO{sub 2}-CaCu{sub 3}Ti{sub 4}O{sub 12} metal-semiconductor nanoparticle composites near percolation thresholds. Apart from a classical percolation transition, associated with the appearance of a continuous conductance path through RuO{sub 2} metal oxide nanoparticles, at least two additional tunneling percolation transitions are detected in this composite system. Such behavior is consistent with the recently emerged picture of a quantum conductivity staircase, which predicts several percolation tunneling thresholds in a system with a hierarchy of local tunneling conductance, due to various degrees of proximity of adjacent conducting particles distributed in an insulating matrix. Here, we investigate a different type of percolation tunneling staircase, associated with a more complex conductive and insulating particle microstructure of two types of non-spherical constituents. As tunneling is strongly temperature dependent, we use variable temperature measurements to emphasize the hierarchical nature of consecutive tunneling transitions. The critical exponents corresponding to specific tunneling percolation thresholds are found to be nonuniversal and temperature dependent.
The 2D lingual appliance system.
Cacciafesta, Vittorio
2013-09-01
The two-dimensional (2D) lingual bracket system represents a valuable treatment option for adult patients seeking a completely invisible orthodontic appliance. The ease of direct or simplified indirect bonding of 2D lingual brackets in combination with low friction mechanics makes it possible to achieve a good functional and aesthetic occlusion, even in the presence of a severe malocclusion. The use of a self-ligating bracket significantly reduces chair-side time for the orthodontist, and the low-profile bracket design greatly improves patient comfort. PMID:24005953
Inkjet printing of 2D layered materials.
Li, Jiantong; Lemme, Max C; Östling, Mikael
2014-11-10
Inkjet printing of 2D layered materials, such as graphene and MoS2, has attracted great interests for emerging electronics. However, incompatible rheology, low concentration, severe aggregation and toxicity of solvents constitute critical challenges which hamper the manufacturing efficiency and product quality. Here, we introduce a simple and general technology concept (distillation-assisted solvent exchange) to efficiently overcome these challenges. By implementing the concept, we have demonstrated excellent jetting performance, ideal printing patterns and a variety of promising applications for inkjet printing of 2D layered materials. PMID:25169938
Measurement of 2D birefringence distribution
NASA Astrophysics Data System (ADS)
Noguchi, Masato; Ishikawa, Tsuyoshi; Ohno, Masahiro; Tachihara, Satoru
1992-10-01
A new measuring method of 2-D birefringence distribution has been developed. It has not been an easy job to get a birefringence distribution in an optical element with conventional ellipsometry because of its lack of scanning means. Finding an analogy between the rotating analyzer method in ellipsometry and the phase-shifting method in recently developed digital interferometry, we have applied the phase-shifting algorithm to ellipsometry, and have developed a new method that makes the measurement of 2-D birefringence distribution easy and possible. The system contains few moving parts, assuring reliability, and measures a large area of a sample at one time, making the measuring time very short.
Isolation of equine peripheral blood mononuclear cells using Percoll.
May, S A; Hooke, R E; Lees, P
1991-01-01
The concentration of Percoll required for isolating equine peripheral blood mononuclear cells has been reinvestigated. A poor cell yield was obtained at the 60 per cent concentration already reported. It is recommended that workers specifically interested in high yields of mononuclear cells, for investigation of lymphocyte and monocyte functions, use a concentration of 65 per cent Percoll. However, workers wishing to isolate pure populations of equine neutrophils might consider a concentration of 70 per cent in the upper layer of Percoll used to retain the mononuclear cells. PMID:1646471
Truncated Long-Range Percolation on Oriented Graphs
NASA Astrophysics Data System (ADS)
van Enter, A. C. D.; de Lima, B. N. B.; Valesin, D.
2016-07-01
We consider different problems within the general theme of long-range percolation on oriented graphs. Our aim is to settle the so-called truncation question, described as follows. We are given probabilities that certain long-range oriented bonds are open; assuming that the sum of these probabilities is infinite, we ask if the probability of percolation is positive when we truncate the graph, disallowing bonds of range above a possibly large but finite threshold. We give some conditions in which the answer is affirmative. We also translate some of our results on oriented percolation to the context of a long-range contact process.
Percolation Model for Slow Dynamics in Glass-Forming Materials
NASA Astrophysics Data System (ADS)
Lois, Gregg; Blawzdziewicz, Jerzy; O'Hern, Corey S.
2009-01-01
We identify a link between the glass transition and percolation of regions of mobility in configuration space. We find that many hallmarks of glassy dynamics, for example, stretched-exponential response functions and a diverging structural relaxation time, are consequences of the critical properties of mean-field percolation. Specific predictions of the percolation model include the range of possible stretching exponents 1/3≤β≤1 and the functional dependence of the structural relaxation time τα and exponent β on temperature, density, and wave number.
Fractal atomic-level percolation in metallic glasses.
Chen, David Z; Shi, Crystal Y; An, Qi; Zeng, Qiaoshi; Mao, Wendy L; Goddard, William A; Greer, Julia R
2015-09-18
Metallic glasses are metallic alloys that exhibit exotic material properties. They may have fractal structures at the atomic level, but a physical mechanism for their organization without ordering has not been identified. We demonstrated a crossover between fractal short-range (<2 atomic diameters) and homogeneous long-range structures using in situ x-ray diffraction, tomography, and molecular dynamics simulations. A specific class of fractal, the percolation cluster, explains the structural details for several metallic-glass compositions. We postulate that atoms percolate in the liquid phase and that the percolating cluster becomes rigid at the glass transition temperature. PMID:26383945
Parallel stitching of 2D materials
Ling, Xi; Wu, Lijun; Lin, Yuxuan; Ma, Qiong; Wang, Ziqiang; Song, Yi; Yu, Lili; Huang, Shengxi; Fang, Wenjing; Zhang, Xu; et al
2016-01-27
Diverse parallel stitched 2D heterostructures, including metal–semiconductor, semiconductor–semiconductor, and insulator–semiconductor, are synthesized directly through selective “sowing” of aromatic molecules as the seeds in the chemical vapor deposition (CVD) method. Lastly, the methodology enables the large-scale fabrication of lateral heterostructures, which offers tremendous potential for its application in integrated circuits.
Parallel Stitching of 2D Materials.
Ling, Xi; Lin, Yuxuan; Ma, Qiong; Wang, Ziqiang; Song, Yi; Yu, Lili; Huang, Shengxi; Fang, Wenjing; Zhang, Xu; Hsu, Allen L; Bie, Yaqing; Lee, Yi-Hsien; Zhu, Yimei; Wu, Lijun; Li, Ju; Jarillo-Herrero, Pablo; Dresselhaus, Mildred; Palacios, Tomás; Kong, Jing
2016-03-01
Diverse parallel stitched 2D heterostructures, including metal-semiconductor, semiconductor-semiconductor, and insulator-semiconductor, are synthesized directly through selective "sowing" of aromatic molecules as the seeds in the chemical vapor deposition (CVD) method. The methodology enables the large-scale fabrication of lateral heterostructures, which offers tremendous potential for its application in integrated circuits. PMID:26813882
Baby universes in 2d quantum gravity
NASA Astrophysics Data System (ADS)
Ambjørn, Jan; Jain, Sanjay; Thorleifsson, Gudmar
1993-06-01
We investigate the fractal structure of 2d quantum gravity, both for pure gravity and for gravity coupled to multiple gaussian fields and for gravity coupled to Ising spins. The roughness of the surfaces is described in terms of baby universes and using numerical simulations we measure their distribution which is related to the string susceptibility exponent γstring.
Fission gas bubble percolation on crystallographically consistent grain boundary networks
NASA Astrophysics Data System (ADS)
Sabogal-Suárez, Daniel; David Alzate-Cardona, Juan; Restrepo-Parra, Elisabeth
2016-07-01
Fission gas release in nuclear fuels can be modeled in the framework of percolation theory, where each grain boundary is classified as open or closed to the release of the fission gas. In the present work, two-dimensional grain boundary networks were assembled both at random and in a crystallographically consistent manner resembling a general textured microstructure. In the crystallographically consistent networks, grain boundaries were classified according to its misorientation. The percolation behavior of the grain boundary networks was evaluated as a function of radial cracks and radial thermal gradients in the fuel pellet. Percolation thresholds tend to shift to the left with increasing length and number of cracks, especially in the presence of thermal gradients. In general, the topology and percolation behavior of the crystallographically consistent networks differs from those of the random network.
Network robustness and fragility: percolation on random graphs.
Callaway, D S; Newman, M E; Strogatz, S H; Watts, D J
2000-12-18
Recent work on the Internet, social networks, and the power grid has addressed the resilience of these networks to either random or targeted deletion of network nodes or links. Such deletions include, for example, the failure of Internet routers or power transmission lines. Percolation models on random graphs provide a simple representation of this process but have typically been limited to graphs with Poisson degree distribution at their vertices. Such graphs are quite unlike real-world networks, which often possess power-law or other highly skewed degree distributions. In this paper we study percolation on graphs with completely general degree distribution, giving exact solutions for a variety of cases, including site percolation, bond percolation, and models in which occupation probabilities depend on vertex degree. We discuss the application of our theory to the understanding of network resilience. PMID:11136023
Application of 2D Non-Graphene Materials and 2D Oxide Nanostructures for Biosensing Technology
Shavanova, Kateryna; Bakakina, Yulia; Burkova, Inna; Shtepliuk, Ivan; Viter, Roman; Ubelis, Arnolds; Beni, Valerio; Starodub, Nickolaj; Yakimova, Rositsa; Khranovskyy, Volodymyr
2016-01-01
The discovery of graphene and its unique properties has inspired researchers to try to invent other two-dimensional (2D) materials. After considerable research effort, a distinct “beyond graphene” domain has been established, comprising the library of non-graphene 2D materials. It is significant that some 2D non-graphene materials possess solid advantages over their predecessor, such as having a direct band gap, and therefore are highly promising for a number of applications. These applications are not limited to nano- and opto-electronics, but have a strong potential in biosensing technologies, as one example. However, since most of the 2D non-graphene materials have been newly discovered, most of the research efforts are concentrated on material synthesis and the investigation of the properties of the material. Applications of 2D non-graphene materials are still at the embryonic stage, and the integration of 2D non-graphene materials into devices is scarcely reported. However, in recent years, numerous reports have blossomed about 2D material-based biosensors, evidencing the growing potential of 2D non-graphene materials for biosensing applications. This review highlights the recent progress in research on the potential of using 2D non-graphene materials and similar oxide nanostructures for different types of biosensors (optical and electrochemical). A wide range of biological targets, such as glucose, dopamine, cortisol, DNA, IgG, bisphenol, ascorbic acid, cytochrome and estradiol, has been reported to be successfully detected by biosensors with transducers made of 2D non-graphene materials. PMID:26861346
Application of 2D Non-Graphene Materials and 2D Oxide Nanostructures for Biosensing Technology.
Shavanova, Kateryna; Bakakina, Yulia; Burkova, Inna; Shtepliuk, Ivan; Viter, Roman; Ubelis, Arnolds; Beni, Valerio; Starodub, Nickolaj; Yakimova, Rositsa; Khranovskyy, Volodymyr
2016-01-01
The discovery of graphene and its unique properties has inspired researchers to try to invent other two-dimensional (2D) materials. After considerable research effort, a distinct "beyond graphene" domain has been established, comprising the library of non-graphene 2D materials. It is significant that some 2D non-graphene materials possess solid advantages over their predecessor, such as having a direct band gap, and therefore are highly promising for a number of applications. These applications are not limited to nano- and opto-electronics, but have a strong potential in biosensing technologies, as one example. However, since most of the 2D non-graphene materials have been newly discovered, most of the research efforts are concentrated on material synthesis and the investigation of the properties of the material. Applications of 2D non-graphene materials are still at the embryonic stage, and the integration of 2D non-graphene materials into devices is scarcely reported. However, in recent years, numerous reports have blossomed about 2D material-based biosensors, evidencing the growing potential of 2D non-graphene materials for biosensing applications. This review highlights the recent progress in research on the potential of using 2D non-graphene materials and similar oxide nanostructures for different types of biosensors (optical and electrochemical). A wide range of biological targets, such as glucose, dopamine, cortisol, DNA, IgG, bisphenol, ascorbic acid, cytochrome and estradiol, has been reported to be successfully detected by biosensors with transducers made of 2D non-graphene materials. PMID:26861346
Fiber Optic Distributed Temperature Sensing of Recharge Basin Percolation Dynamics
NASA Astrophysics Data System (ADS)
Becker, M.; Allen, E. M.; Hutchinson, A.
2014-12-01
Infiltration (spreading) basins are a central component of managed aquifer and recovery operations around the world. The concept is simple. Water is percolated into an aquifer where it can be withdrawn at a later date. However, managing infiltration basins can be complicated by entrapped air in sediments, strata of low permeability, clogging of the recharge surface, and biological growth, among other factors. Understanding the dynamics of percolation in light of these complicating factors provides a basis for making management decisions that increase recharge efficiency. As an aid to understanding percolation dynamics, fiber optic distribute temperature sensing (DTS) was used to track heat as a tracer of water movement in an infiltration basin. The diurnal variation of temperature in the basin was sensed at depth. The time lag between the oscillating temperature signal at the surface and at depth indicated the velocity of water percolation. DTS fiber optic cables were installed horizontally along the basin and vertically in boreholes to measure percolation behavior. The horizontal cable was installed in trenches at 0.3 and 1 m depth, and the vertical cable was installed using direct push technology. The vertical cable was tightly wound to produce a factor of 10 increase in spatial resolution of temperature measurements. Temperature was thus measured every meter across the basin and every 10 cm to a depth of 10 m. Data from the trenched cable suggested homogeneous percolation across the basin, but infiltration rates were a function of stage indicating non-ideal percolation. Vertical temperature monitoring showed significant lateral flow in sediments underlying the basin both during saturation and operation of the basin. Deflections in the vertical temperature profile corresponded with fine grained layers identified in core samples indicating a transient perched water table condition. The three-dimensional flow in this relatively homogenous surficial geology calls
Social percolation and the influence of mass media
NASA Astrophysics Data System (ADS)
Proykova, Ana; Stauffer, Dietrich
2002-09-01
In the marketing model of Solomon and Weisbuch, people buy a product only if their neighbours tell them of its quality, and if this quality is higher than their own quality expectations. Now we introduce additional information from the mass media, which is analogous to the ghost field in percolation theory. The mass media shift the percolative phase transition observed in the model, and decrease the time after which the stationary state is reached.
Transfer-matrix methods and results for directed percolation
NASA Astrophysics Data System (ADS)
Ben-Avraham, D.; Bidaux, R.; Schulman, L. S.
1991-06-01
For directed percolation, the second nontrivial eigenvalue of the transfer matrix is shown to have its maximum at pc. Using this, we obtain for (1+1)-dimensional directed site percolation pc=0.706 522+/-0.000 005, which agrees within 10-3 with other results, but is nevertheless significantly (in terms of quoted uncertainties) different from them. We also relate other quantities to the transfer-matrix spectrum and eigenfunctions.
On Logarithmic Corrections in Two-Dimensional Percolation
NASA Astrophysics Data System (ADS)
Marsili, M.; Jug, G.
The possibility of unusual leading logarithmic corrections to the asymptotic behavior of the percolation connectedness length ξ in two dimensions is explored through a finite-size transfer-matrix analysis on strips of widths L≤12. It is found that, for both square-site and triangular-site percolation problems, no such corrections arise and the accepted exact value of the critical exponent ν is recovered.
Percolation temperature and the ''instability'' of the effective potential
Arago de Carvalho, C.; Bazeia, D.; Eboli, O.J.P.; Marques, G.C.; da Silva, A.J.; Ventura, I.
1985-03-15
We show that in spontaneously broken lambdaphi/sup 4/ theory the percolation temperature coincides with the temperature at which the semiclassical (loop) expansion of the effective potential (free energy) of the system around a uniform field configuration fails. This allows us to extract the percolation temperature directly from the effective potential. The addition of fermions or gauge fields does not alter the result as long as they are weakly coupled to the scalars. The coincidence holds in the high-temperature limit.
Two exactly soluble models of rigidity percolation
Thorpe, M. F.; Stinchcombe, R. B.
2014-01-01
We summarize results for two exactly soluble classes of bond-diluted models for rigidity percolation, which can serve as a benchmark for numerical and approximate methods. For bond dilution problems involving rigidity, the number of floppy modes F plays the role of a free energy. Both models involve pathological lattices with two-dimensional vector displacements. The first model involves hierarchical lattices where renormalization group calculations can be used to give exact solutions. Algebraic scaling transformations produce a transition of the second order, with an unstable critical point and associated scaling laws at a mean coordination 〈r〉=4.41, which is above the ‘mean field’ value 〈r〉=4 predicted by Maxwell constraint counting. The order parameter exponent associated with the spanning rigid cluster geometry is β=0.0775 and that associated with the divergence of the correlation length and the anomalous lattice dimension d is dν=3.533. The second model involves Bethe lattices where the rigidity transition is massively first order by a mean coordination 〈r〉=3.94 slightly below that predicted by Maxwell constraint counting. We show how a Maxwell equal area construction can be used to locate the first-order transition and how this result agrees with simulation results on larger random-bond lattices using the pebble game algorithm. PMID:24379428
Understanding the Percolation Characteristics of Nonlinear Composite Dielectrics.
Yang, Xiao; Hu, Jun; Chen, Shuiming; He, Jinliang
2016-01-01
Nonlinear composite dielectrics can function as smart materials for stress control and field grading in all fields of electrical insulations. The percolation process is a significant issue of composite dielectrics. However, the classic percolation theory mainly deals with traditional composites in which the electrical parameters of both insulation matrix and conducting fillers are independent of the applied electric field. This paper measured the nonlinear V-I characteristics of ZnO microvaristors/silicone rubber composites with several filler concentrations around an estimated percolation threshold. For the comparison with the experiment, a new microstructural model is proposed to simulate the nonlinear conducting behavior of the composite dielectrics modified by metal oxide fillers, which is based on the Voronoi network and considers the breakdown feature of the insulation matrix for near percolated composites. Through both experiment and simulation, the interior conducting mechanism and percolation process of the nonlinear composites were presented and a specific percolation threshold was determined as 33%. This work has provided a solution to better understand the characteristics of nonlinear composite dielectrics. PMID:27476998
Phase Diagram of Inhomogeneous Percolation with a Defect Plane
NASA Astrophysics Data System (ADS)
Iliev, G. K.; Janse van Rensburg, E. J.; Madras, N.
2015-01-01
Let be the -dimensional hypercubic lattice and let be an -dimensional sublattice, with . We consider a model of inhomogeneous bond percolation on at densities and , in which edges in are open with probability , and edges in open with probability . We generalize several classical results of (homogeneous) bond percolation to this inhomogeneous model. The phase diagram of the model is presented, and it is shown that there is a subcritical regime for and (where is the critical probability for homogeneous percolation in ), a bulk supercritical regime for , and a surface supercritical regime for and . We show that is a strictly decreasing function for , with a jump discontinuity at . We extend the Aizenman-Barsky differential inequalities for homogeneous percolation to the inhomogeneous model and use them to prove that the susceptibility is finite inside the subcritical phase. We prove that the cluster size distribution decays exponentially in the subcritical phase, and sub-exponentially in the supercritical phases. For a model of lattice animals with a defect plane, the free energy is related to functions of the inhomogeneous percolation model, and we show how the percolation transition implies a non-analyticity in the free energy of the animal model. Finally, we present simulation estimates of the critical curve.
Percolation theory applied to measures of fragmentation in social networks
NASA Astrophysics Data System (ADS)
Chen, Yiping; Paul, Gerald; Cohen, Reuven; Havlin, Shlomo; Borgatti, Stephen P.; Liljeros, Fredrik; Stanley, H. Eugene
2007-04-01
We apply percolation theory to a recently proposed measure of fragmentation F for social networks. The measure F is defined as the ratio between the number of pairs of nodes that are not connected in the fragmented network after removing a fraction q of nodes and the total number of pairs in the original fully connected network. We compare F with the traditional measure used in percolation theory, P∞ , the fraction of nodes in the largest cluster relative to the total number of nodes. Using both analytical and numerical methods from percolation, we study Erdős-Rényi and scale-free networks under various types of node removal strategies. The removal strategies are random removal, high degree removal, and high betweenness centrality removal. We find that for a network obtained after removal (all strategies) of a fraction q of nodes above percolation threshold, P∞≈(1-F)1/2 . For fixed P∞ and close to percolation threshold (q=qc) , we show that 1-F better reflects the actual fragmentation. Close to qc , for a given P∞ , 1-F has a broad distribution and it is thus possible to improve the fragmentation of the network. We also study and compare the fragmentation measure F and the percolation measure P∞ for a real social network of workplaces linked by the households of the employees and find similar results.
Understanding the Percolation Characteristics of Nonlinear Composite Dielectrics
NASA Astrophysics Data System (ADS)
Yang, Xiao; Hu, Jun; Chen, Shuiming; He, Jinliang
2016-08-01
Nonlinear composite dielectrics can function as smart materials for stress control and field grading in all fields of electrical insulations. The percolation process is a significant issue of composite dielectrics. However, the classic percolation theory mainly deals with traditional composites in which the electrical parameters of both insulation matrix and conducting fillers are independent of the applied electric field. This paper measured the nonlinear V-I characteristics of ZnO microvaristors/silicone rubber composites with several filler concentrations around an estimated percolation threshold. For the comparison with the experiment, a new microstructural model is proposed to simulate the nonlinear conducting behavior of the composite dielectrics modified by metal oxide fillers, which is based on the Voronoi network and considers the breakdown feature of the insulation matrix for near percolated composites. Through both experiment and simulation, the interior conducting mechanism and percolation process of the nonlinear composites were presented and a specific percolation threshold was determined as 33%. This work has provided a solution to better understand the characteristics of nonlinear composite dielectrics.
Percolation velocity dependence on local concentration in bidisperse granular flows
NASA Astrophysics Data System (ADS)
Jones, Ryan P.; Xiao, Hongyi; Deng, Zhekai; Umbanhowar, Paul B.; Lueptow, Richard M.
The percolation velocity, up, of granular material in size or density bidisperse mixtures depends on the local concentration, particle size ratio, particle density ratio, and shear rate, γ ˙. Discrete element method computational results were obtained for bounded heap flows with size ratios between 1 and 3 and for density ratios between 1 and 4. The results indicate that small particles percolate downward faster when surrounded by large particles than large particles percolate upward when surrounded by small particles, as was recently observed in shear-box experiments. Likewise, heavy particles percolate downward faster when surrounded by light particles than light particles percolate upward when surrounded by heavy particles. The dependence of up / γ ˙ on local concentration results in larger percolation flux magnitudes at high concentrations of large (or light) particles compared to high concentrations of small (or heavy) particles, while local volumetric flux is conserved. The dependence of up / γ ˙ on local concentration can be incorporated into a continuum model, but the impact on global segregation patterns is usually minimal. Partially funded by Dow Chemical Company and NSF Grant No. CBET-1511450.
Percolation model for selective dissolution of multi-component glasses
Kale, R.P.; Brinker, C.J.
1995-03-01
A percolation model is developed which accounts for most known features of the process of porous glass membrane preparation by selective dissolution of multi-component glasses. The model is founded within tile framework of the classical percolation theory, wherein the components of a glass are represented by random sites on a suitable lattice. Computer simulation is used to mirror the generation of a porous structure during the dissolution process, reproducing many of the features associated with the phenomenon. Simulation results evaluate the effect of the initial composition of the glass on the kinetics of the leaching process as well as the morphology of the generated porous structure. The percolation model establishes the porous structure as a percolating cluster of unreachable constituents in the glass. The simulation algorithm incorporates removal of both, the accessible leachable components in the glass as well as the independent clusters of unreachable components not attached to the percolating cluster. The dissolution process thus becomes limited by the conventional site percolation thresholds of the unreachable components (which restricts the formation of the porous network), as well as the leachable components (which restricts the accessibility of the solvating medium into the glass). The simulation results delineate the range of compositional variations for successful porous glass preparation and predict the variation of porosity, surface area, dissolution rates and effluent composition with initial composition and time. Results compared well with experimental studies and improved upon similar models attempted in die past.
Understanding the Percolation Characteristics of Nonlinear Composite Dielectrics
Yang, Xiao; Hu, Jun; Chen, Shuiming; He, Jinliang
2016-01-01
Nonlinear composite dielectrics can function as smart materials for stress control and field grading in all fields of electrical insulations. The percolation process is a significant issue of composite dielectrics. However, the classic percolation theory mainly deals with traditional composites in which the electrical parameters of both insulation matrix and conducting fillers are independent of the applied electric field. This paper measured the nonlinear V-I characteristics of ZnO microvaristors/silicone rubber composites with several filler concentrations around an estimated percolation threshold. For the comparison with the experiment, a new microstructural model is proposed to simulate the nonlinear conducting behavior of the composite dielectrics modified by metal oxide fillers, which is based on the Voronoi network and considers the breakdown feature of the insulation matrix for near percolated composites. Through both experiment and simulation, the interior conducting mechanism and percolation process of the nonlinear composites were presented and a specific percolation threshold was determined as 33%. This work has provided a solution to better understand the characteristics of nonlinear composite dielectrics. PMID:27476998
Percolation theory applied to measures of fragmentation in social networks.
Chen, Yiping; Paul, Gerald; Cohen, Reuven; Havlin, Shlomo; Borgatti, Stephen P; Liljeros, Fredrik; Stanley, H Eugene
2007-04-01
We apply percolation theory to a recently proposed measure of fragmentation F for social networks. The measure F is defined as the ratio between the number of pairs of nodes that are not connected in the fragmented network after removing a fraction q of nodes and the total number of pairs in the original fully connected network. We compare F with the traditional measure used in percolation theory, P(infinity), the fraction of nodes in the largest cluster relative to the total number of nodes. Using both analytical and numerical methods from percolation, we study Erdos-Rényi and scale-free networks under various types of node removal strategies. The removal strategies are random removal, high degree removal, and high betweenness centrality removal. We find that for a network obtained after removal (all strategies) of a fraction q of nodes above percolation threshold, P(infinity) approximately (1-F)1/2. For fixed P(infinity) and close to percolation threshold (q=qc), we show that 1-F better reflects the actual fragmentation. Close to qc, for a given P(infinity), 1-F has a broad distribution and it is thus possible to improve the fragmentation of the network. We also study and compare the fragmentation measure F and the percolation measure P(infinity) for a real social network of workplaces linked by the households of the employees and find similar results. PMID:17500961
Interpreting the CYP2D6 Results From the International Tamoxifen Pharmacogenetics Consortium
Province, MA; Altman, RB; Klein, TE
2014-01-01
Meta-analysis of the entire analyzable cohort of 4,935 tamoxifen-treated breast cancer patients by the International Tamoxifen Pharmacogenetics Consortium (ITPC) (criterion 3) revealed no CYP2D6 effect on outcomes but strong heterogeneity across sites.1 However, a post hoc–defined subgroup (criterion 1: postmenopausal, estrogen receptor positive, receiving 20 mg/day tamoxifen for 5 years; n = 1,996) did find statistically significant effect of CYP2D6 on both invasive disease–free survival as well as breast cancer–free interval, with little site heterogeneity. How should we interpret these discrepant findings? PMID:25056393
Static & Dynamic Response of 2D Solids
1996-07-15
NIKE2D is an implicit finite-element code for analyzing the finite deformation, static and dynamic response of two-dimensional, axisymmetric, plane strain, and plane stress solids. The code is fully vectorized and available on several computing platforms. A number of material models are incorporated to simulate a wide range of material behavior including elasto-placicity, anisotropy, creep, thermal effects, and rate dependence. Slideline algorithms model gaps and sliding along material interfaces, including interface friction, penetration and single surfacemore » contact. Interactive-graphics and rezoning is included for analyses with large mesh distortions. In addition to quasi-Newton and arc-length procedures, adaptive algorithms can be defined to solve the implicit equations using the solution language ISLAND. Each of these capabilities and more make NIKE2D a robust analysis tool.« less
Stochastic Inversion of 2D Magnetotelluric Data
2010-07-01
The algorithm is developed to invert 2D magnetotelluric (MT) data based on sharp boundary parametrization using a Bayesian framework. Within the algorithm, we consider the locations and the resistivity of regions formed by the interfaces are as unknowns. We use a parallel, adaptive finite-element algorithm to forward simulate frequency-domain MT responses of 2D conductivity structure. Those unknown parameters are spatially correlated and are described by a geostatistical model. The joint posterior probability distribution function ismore » explored by Markov Chain Monte Carlo (MCMC) sampling methods. The developed stochastic model is effective for estimating the interface locations and resistivity. Most importantly, it provides details uncertainty information on each unknown parameter. Hardware requirements: PC, Supercomputer, Multi-platform, Workstation; Software requirements C and Fortan; Operation Systems/version is Linux/Unix or Windows« less
Stochastic Inversion of 2D Magnetotelluric Data
Chen, Jinsong
2010-07-01
The algorithm is developed to invert 2D magnetotelluric (MT) data based on sharp boundary parametrization using a Bayesian framework. Within the algorithm, we consider the locations and the resistivity of regions formed by the interfaces are as unknowns. We use a parallel, adaptive finite-element algorithm to forward simulate frequency-domain MT responses of 2D conductivity structure. Those unknown parameters are spatially correlated and are described by a geostatistical model. The joint posterior probability distribution function is explored by Markov Chain Monte Carlo (MCMC) sampling methods. The developed stochastic model is effective for estimating the interface locations and resistivity. Most importantly, it provides details uncertainty information on each unknown parameter. Hardware requirements: PC, Supercomputer, Multi-platform, Workstation; Software requirements C and Fortan; Operation Systems/version is Linux/Unix or Windows
Explicit 2-D Hydrodynamic FEM Program
1996-08-07
DYNA2D* is a vectorized, explicit, two-dimensional, axisymmetric and plane strain finite element program for analyzing the large deformation dynamic and hydrodynamic response of inelastic solids. DYNA2D* contains 13 material models and 9 equations of state (EOS) to cover a wide range of material behavior. The material models implemented in all machine versions are: elastic, orthotropic elastic, kinematic/isotropic elastic plasticity, thermoelastoplastic, soil and crushable foam, linear viscoelastic, rubber, high explosive burn, isotropic elastic-plastic, temperature-dependent elastic-plastic. Themore » isotropic and temperature-dependent elastic-plastic models determine only the deviatoric stresses. Pressure is determined by one of 9 equations of state including linear polynomial, JWL high explosive, Sack Tuesday high explosive, Gruneisen, ratio of polynomials, linear polynomial with energy deposition, ignition and growth of reaction in HE, tabulated compaction, and tabulated.« less
Schottky diodes from 2D germanane
NASA Astrophysics Data System (ADS)
Sahoo, Nanda Gopal; Esteves, Richard J.; Punetha, Vinay Deep; Pestov, Dmitry; Arachchige, Indika U.; McLeskey, James T.
2016-07-01
We report on the fabrication and characterization of a Schottky diode made using 2D germanane (hydrogenated germanene). When compared to germanium, the 2D structure has higher electron mobility, an optimal band-gap, and exceptional stability making germanane an outstanding candidate for a variety of opto-electronic devices. One-atom-thick sheets of hydrogenated puckered germanium atoms have been synthesized from a CaGe2 framework via intercalation and characterized by XRD, Raman, and FTIR techniques. The material was then used to fabricate Schottky diodes by suspending the germanane in benzonitrile and drop-casting it onto interdigitated metal electrodes. The devices demonstrate significant rectifying behavior and the outstanding potential of this material.
Universality Class of the Nishimori Point in the 2D +/-J Random-Bond Ising Model
NASA Astrophysics Data System (ADS)
Honecker, A.; Picco, M.; Pujol, P.
2001-07-01
We study the universality class of the Nishimori point in the 2D +/-J random-bond Ising model by means of the numerical transfer-matrix method. Using the domain-wall free energy, we locate the position of the fixed point along the Nishimori line at the critical concentration value pc = 0.1094+/-0.0002 and estimate ν = 1.33+/-0.03. Then, we obtain the exponents for the moments of the spin-spin correlation functions as well as the value for the central charge c = 0.464+/-0.004. The main qualitative result is the fact that percolation is now excluded as a candidate for describing the universality class of this fixed point.
Universality class of the Nishimori point in the 2D +/- J random-bond Ising model.
Honecker, A; Picco, M; Pujol, P
2001-07-23
We study the universality class of the Nishimori point in the 2D +/- J random-bond Ising model by means of the numerical transfer-matrix method. Using the domain-wall free energy, we locate the position of the fixed point along the Nishimori line at the critical concentration value p(c) = 0.1094 +/- 0.0002 and estimate nu = 1.33 +/- 0.03. Then, we obtain the exponents for the moments of the spin-spin correlation functions as well as the value for the central charge c = 0.464 +/- 0.004. The main qualitative result is the fact that percolation is now excluded as a candidate for describing the universality class of this fixed point. PMID:11461639
Layer Engineering of 2D Semiconductor Junctions.
He, Yongmin; Sobhani, Ali; Lei, Sidong; Zhang, Zhuhua; Gong, Yongji; Jin, Zehua; Zhou, Wu; Yang, Yingchao; Zhang, Yuan; Wang, Xifan; Yakobson, Boris; Vajtai, Robert; Halas, Naomi J; Li, Bo; Xie, Erqing; Ajayan, Pulickel
2016-07-01
A new concept for junction fabrication by connecting multiple regions with varying layer thicknesses, based on the thickness dependence, is demonstrated. This type of junction is only possible in super-thin-layered 2D materials, and exhibits similar characteristics as p-n junctions. Rectification and photovoltaic effects are observed in chemically homogeneous MoSe2 junctions between domains of different thicknesses. PMID:27136275
NASA Astrophysics Data System (ADS)
Smith, Greg; Lankshear, Allan
1998-07-01
2dF is a multi-object instrument mounted at prime focus at the AAT capable of spectroscopic analysis of 400 objects in a single 2 degree field. It also prepares a second 2 degree 400 object field while the first field is being observed. At its heart is a high precision robotic positioner that places individual fiber end magnetic buttons on one of two field plates. The button gripper is carried on orthogonal gantries powered by linear synchronous motors and contains a TV camera which precisely locates backlit buttons to allow placement in user defined locations to 10 (mu) accuracy. Fiducial points on both plates can also be observed by the camera to allow repeated checks on positioning accuracy. Field plates rotate to follow apparent sky rotation. The spectrographs both analyze light from the 200 observing fibers each and back- illuminate the 400 fibers being re-positioned during the observing run. The 2dF fiber position and spectrograph system is a large and complex instrument located at the prime focus of the Anglo Australian Telescope. The mechanical design has departed somewhat from the earlier concepts of Gray et al, but still reflects the audacity of those first ideas. The positioner is capable of positioning 400 fibers on a field plate while another 400 fibers on another plate are observing at the focus of the telescope and feeding the twin spectrographs. When first proposed it must have seemed like ingenuity unfettered by caution. Yet now it works, and works wonderfully well. 2dF is a system which functions as the result of the combined and coordinated efforts of the astronomers, the mechanical designers and tradespeople, the electronic designers, the programmers, the support staff at the telescope, and the manufacturing subcontractors. The mechanical design of the 2dF positioner and spectrographs was carried out by the mechanical engineering staff of the AAO and the majority of the manufacture was carried out in the AAO workshops.
Realistic and efficient 2D crack simulation
NASA Astrophysics Data System (ADS)
Yadegar, Jacob; Liu, Xiaoqing; Singh, Abhishek
2010-04-01
Although numerical algorithms for 2D crack simulation have been studied in Modeling and Simulation (M&S) and computer graphics for decades, realism and computational efficiency are still major challenges. In this paper, we introduce a high-fidelity, scalable, adaptive and efficient/runtime 2D crack/fracture simulation system by applying the mathematically elegant Peano-Cesaro triangular meshing/remeshing technique to model the generation of shards/fragments. The recursive fractal sweep associated with the Peano-Cesaro triangulation provides efficient local multi-resolution refinement to any level-of-detail. The generated binary decomposition tree also provides efficient neighbor retrieval mechanism used for mesh element splitting and merging with minimal memory requirements essential for realistic 2D fragment formation. Upon load impact/contact/penetration, a number of factors including impact angle, impact energy, and material properties are all taken into account to produce the criteria of crack initialization, propagation, and termination leading to realistic fractal-like rubble/fragments formation. The aforementioned parameters are used as variables of probabilistic models of cracks/shards formation, making the proposed solution highly adaptive by allowing machine learning mechanisms learn the optimal values for the variables/parameters based on prior benchmark data generated by off-line physics based simulation solutions that produce accurate fractures/shards though at highly non-real time paste. Crack/fracture simulation has been conducted on various load impacts with different initial locations at various impulse scales. The simulation results demonstrate that the proposed system has the capability to realistically and efficiently simulate 2D crack phenomena (such as window shattering and shards generation) with diverse potentials in military and civil M&S applications such as training and mission planning.
Compact 2-D graphical representation of DNA
NASA Astrophysics Data System (ADS)
Randić, Milan; Vračko, Marjan; Zupan, Jure; Novič, Marjana
2003-05-01
We present a novel 2-D graphical representation for DNA sequences which has an important advantage over the existing graphical representations of DNA in being very compact. It is based on: (1) use of binary labels for the four nucleic acid bases, and (2) use of the 'worm' curve as template on which binary codes are placed. The approach is illustrated on DNA sequences of the first exon of human β-globin and gorilla β-globin.
2D materials: Graphene and others
NASA Astrophysics Data System (ADS)
Bansal, Suneev Anil; Singh, Amrinder Pal; Kumar, Suresh
2016-05-01
Present report reviews the recent advancements in new atomically thick 2D materials. Materials covered in this review are Graphene, Silicene, Germanene, Boron Nitride (BN) and Transition metal chalcogenides (TMC). These materials show extraordinary mechanical, electronic and optical properties which make them suitable candidates for future applications. Apart from unique properties, tune-ability of highly desirable properties of these materials is also an important area to be emphasized on.
Mason, W.E.
1983-03-01
A set of finite element codes for the solution of nonlinear, two-dimensional (TACO2D) and three-dimensional (TACO3D) heat transfer problems. Performs linear and nonlinear analyses of both transient and steady state heat transfer problems. Has the capability to handle time or temperature dependent material properties. Materials may be either isotropic or orthotropic. A variety of time and temperature dependent boundary conditions and loadings are available including temperature, flux, convection, radiation, and internal heat generation.
Tomosynthesis imaging with 2D scanning trajectories
NASA Astrophysics Data System (ADS)
Khare, Kedar; Claus, Bernhard E. H.; Eberhard, Jeffrey W.
2011-03-01
Tomosynthesis imaging in chest radiography provides volumetric information with the potential for improved diagnostic value when compared to the standard AP or LAT projections. In this paper we explore the image quality benefits of 2D scanning trajectories when coupled with advanced image reconstruction approaches. It is intuitively clear that 2D trajectories provide projection data that is more complete in terms of Radon space filling, when compared with conventional tomosynthesis using a linearly scanned source. Incorporating this additional information for obtaining improved image quality is, however, not a straightforward problem. The typical tomosynthesis reconstruction algorithms are based on direct inversion methods e.g. Filtered Backprojection (FBP) or iterative algorithms that are variants of the Algebraic Reconstruction Technique (ART). The FBP approach is fast and provides high frequency details in the image but at the same time introduces streaking artifacts degrading the image quality. The iterative methods can reduce the image artifacts by using image priors but suffer from a slow convergence rate, thereby producing images lacking high frequency details. In this paper we propose using a fast converging optimal gradient iterative scheme that has advantages of both the FBP and iterative methods in that it produces images with high frequency details while reducing the image artifacts. We show that using favorable 2D scanning trajectories along with the proposed reconstruction method has the advantage of providing improved depth information for structures such as the spine and potentially producing images with more isotropic resolution.
MAGNUM-2D computer code: user's guide
England, R.L.; Kline, N.W.; Ekblad, K.J.; Baca, R.G.
1985-01-01
Information relevant to the general use of the MAGNUM-2D computer code is presented. This computer code was developed for the purpose of modeling (i.e., simulating) the thermal and hydraulic conditions in the vicinity of a waste package emplaced in a deep geologic repository. The MAGNUM-2D computer computes (1) the temperature field surrounding the waste package as a function of the heat generation rate of the nuclear waste and thermal properties of the basalt and (2) the hydraulic head distribution and associated groundwater flow fields as a function of the temperature gradients and hydraulic properties of the basalt. MAGNUM-2D is a two-dimensional numerical model for transient or steady-state analysis of coupled heat transfer and groundwater flow in a fractured porous medium. The governing equations consist of a set of coupled, quasi-linear partial differential equations that are solved using a Galerkin finite-element technique. A Newton-Raphson algorithm is embedded in the Galerkin functional to formulate the problem in terms of the incremental changes in the dependent variables. Both triangular and quadrilateral finite elements are used to represent the continuum portions of the spatial domain. Line elements may be used to represent discrete conduits. 18 refs., 4 figs., 1 tab.
Engineering light outcoupling in 2D materials.
Lien, Der-Hsien; Kang, Jeong Seuk; Amani, Matin; Chen, Kevin; Tosun, Mahmut; Wang, Hsin-Ping; Roy, Tania; Eggleston, Michael S; Wu, Ming C; Dubey, Madan; Lee, Si-Chen; He, Jr-Hau; Javey, Ali
2015-02-11
When light is incident on 2D transition metal dichalcogenides (TMDCs), it engages in multiple reflections within underlying substrates, producing interferences that lead to enhancement or attenuation of the incoming and outgoing strength of light. Here, we report a simple method to engineer the light outcoupling in semiconducting TMDCs by modulating their dielectric surroundings. We show that by modulating the thicknesses of underlying substrates and capping layers, the interference caused by substrate can significantly enhance the light absorption and emission of WSe2, resulting in a ∼11 times increase in Raman signal and a ∼30 times increase in the photoluminescence (PL) intensity of WSe2. On the basis of the interference model, we also propose a strategy to control the photonic and optoelectronic properties of thin-layer WSe2. This work demonstrates the utilization of outcoupling engineering in 2D materials and offers a new route toward the realization of novel optoelectronic devices, such as 2D LEDs and solar cells. PMID:25602462
Modeling gravity-driven fingering in rough-walled fractures using modified percolation theory
Glass, R.J.
1992-12-31
Pore scale invasion percolation theory is modified for imbibition of.wetting fluids into fractures. The effects of gravity, local aperture field geometry, and local in-plane air/water interfacial curvatureare included in the calculation of aperture filling potential which controls wetted structure growth within the fracture. The inclusion of gravity yields fingers oriented in the direction of the gravitational gradient. These fingers widen and tend to meander and branch more as the gravitational gradient decreases. In-plane interfacial curvature also greatly affects the wetted structure in both horizontal and nonhorizontal fractures causing the formation of macroscopic wetting fronts. The modified percolation model is used to simulate imbibition into an analogue rough-walled fracture where both fingering and horizontal imbibition experiments were previously conducted. Comparison of numerical and experimental results showed reasonably good agreement. This process oriented physical and numerical modeling is-a necessary step toward including gravity-driven fingering in models of flow and transport through unsaturated, fractured rock.
2D superconductivity by ionic gating
NASA Astrophysics Data System (ADS)
Iwasa, Yoshi
2D superconductivity is attracting a renewed interest due to the discoveries of new highly crystalline 2D superconductors in the past decade. Superconductivity at the oxide interfaces triggered by LaAlO3/SrTiO3 has become one of the promising routes for creation of new 2D superconductors. Also, the MBE grown metallic monolayers including FeSe are also offering a new platform of 2D superconductors. In the last two years, there appear a variety of monolayer/bilayer superconductors fabricated by CVD or mechanical exfoliation. Among these, electric field induced superconductivity by electric double layer transistor (EDLT) is a unique platform of 2D superconductivity, because of its ability of high density charge accumulation, and also because of the versatility in terms of materials, stemming from oxides to organics and layered chalcogenides. In this presentation, the following issues of electric filed induced superconductivity will be addressed; (1) Tunable carrier density, (2) Weak pinning, (3) Absence of inversion symmetry. (1) Since the sheet carrier density is quasi-continuously tunable from 0 to the order of 1014 cm-2, one is able to establish an electronic phase diagram of superconductivity, which will be compared with that of bulk superconductors. (2) The thickness of superconductivity can be estimated as 2 - 10 nm, dependent on materials, and is much smaller than the in-plane coherence length. Such a thin but low resistance at normal state results in extremely weak pinning beyond the dirty Boson model in the amorphous metallic films. (3) Due to the electric filed, the inversion symmetry is inherently broken in EDLT. This feature appears in the enhancement of Pauli limit of the upper critical field for the in-plane magnetic fields. In transition metal dichalcogenide with a substantial spin-orbit interactions, we were able to confirm the stabilization of Cooper pair due to its spin-valley locking. This work has been supported by Grant-in-Aid for Specially
Jin, Youngho; Gerhardt, Rosario A
2014-12-24
Electrical percolation in nanocomposites consisting of poly(methyl methacrylate) (PMMA) and antimony tin oxide (ATO) nanoparticles was investigated experimentally using monosize and polydisperse polymer particles. The nanocomposites were fabricated by compression molding at 170 °C. The matrix PMMA was transformed into space filling polyhedra while the ATO nanoparticles distributed along the sharp edges of the matrix, forming a 3D interconnected network. The measured electrical resistivity showed that percolation was achieved in these materials at a very low ATO content of 0.99 wt % ATO when monosize PMMA was used, whereas 1.48 wt % ATO was needed to achieve percolation when the PMMA was polydispersed. A parametric finite element approach was chosen to model this unique microstructure-driven self-assembling percolation behavior. COMSOL Multiphysics was used to solve the effects of phase segregation between the matrix and the filler using a 2D simplified model in the frequency domain of the AC/DC module. It was found that the percolation threshold (pc) is affected by the size ratio between the matrix and the filler in a systematic way. Furthermore, simulations indicate that small deviations from perfect interconnection result mostly in changes in the electrical resistivity while the minimum DC resistivity achievable in any given composite is governed by the electrical conductivity of the filler, which must be accurately known in order to obtain an accurate prediction. The model is quite general and is able to predict percolation behavior in a number of other similarly processed segregated network nanocomposites. PMID:25427537
Damage of Honeybee Colonies and Non-Equilibrium Percolation Phase Transition
NASA Astrophysics Data System (ADS)
Zhang, Peipei; Su, Beibei; He, Da-Ren
Recently the mechanism of the damage caused by invasion of Apis mellifera capensis honeybee into the normal A. M. Scutellata colonies became interesting for scientists due to the fact that the mechanism may resemble those of cancer vicious hyperplasia, spreading of some epidemic, and turbulence of society induced by some bad society groups. We suggest a new guess that losing control of self-reproduction disturbs and throws information structure of the society into confuse. We simulate the damage process with a cellular automata based on the guess. The simulation shows that the process is equivalent to a non-equilibrium percolation phase transition. This discussion remind us that the management and monitor on the information network between society members may be a more effective way for avoiding the overflow of the destructor sub-colonies.
GBL-2D Version 1.0: a 2D geometry boolean library.
McBride, Cory L. (Elemental Technologies, American Fort, UT); Schmidt, Rodney Cannon; Yarberry, Victor R.; Meyers, Ray J.
2006-11-01
This report describes version 1.0 of GBL-2D, a geometric Boolean library for 2D objects. The library is written in C++ and consists of a set of classes and routines. The classes primarily represent geometric data and relationships. Classes are provided for 2D points, lines, arcs, edge uses, loops, surfaces and mask sets. The routines contain algorithms for geometric Boolean operations and utility functions. Routines are provided that incorporate the Boolean operations: Union(OR), XOR, Intersection and Difference. A variety of additional analytical geometry routines and routines for importing and exporting the data in various file formats are also provided. The GBL-2D library was originally developed as a geometric modeling engine for use with a separate software tool, called SummitView [1], that manipulates the 2D mask sets created by designers of Micro-Electro-Mechanical Systems (MEMS). However, many other practical applications for this type of software can be envisioned because the need to perform 2D Boolean operations can arise in many contexts.
Percolation model with an additional source of disorder.
Kundu, Sumanta; Manna, S S
2016-06-01
The ranges of transmission of the mobiles in a mobile ad hoc network are not uniform in reality. They are affected by the temperature fluctuation in air, obstruction due to the solid objects, even the humidity difference in the environment, etc. How the varying range of transmission of the individual active elements affects the global connectivity in the network may be an important practical question to ask. Here a model of percolation phenomena, with an additional source of disorder, is introduced for a theoretical understanding of this problem. As in ordinary percolation, sites of a square lattice are occupied randomly with probability p. Each occupied site is then assigned a circular disk of random value R for its radius. A bond is defined to be occupied if and only if the radii R_{1} and R_{2} of the disks centered at the ends satisfy a certain predefined condition. In a very general formulation, one divides the R_{1}-R_{2} plane into two regions by an arbitrary closed curve. One defines a point within one region as representing an occupied bond; otherwise it is a vacant bond. The study of three different rules under this general formulation indicates that the percolation threshold always varies continuously. This threshold has two limiting values, one is p_{c}(sq), the percolation threshold for the ordinary site percolation on the square lattice, and the other is unity. The approach of the percolation threshold to its limiting values are characterized by two exponents. In a special case, all lattice sites are occupied by disks of random radii R∈{0,R_{0}} and a percolation transition is observed with R_{0} as the control variable, similar to the site occupation probability. PMID:27415234
Percolation model with an additional source of disorder
NASA Astrophysics Data System (ADS)
Kundu, Sumanta; Manna, S. S.
2016-06-01
The ranges of transmission of the mobiles in a mobile ad hoc network are not uniform in reality. They are affected by the temperature fluctuation in air, obstruction due to the solid objects, even the humidity difference in the environment, etc. How the varying range of transmission of the individual active elements affects the global connectivity in the network may be an important practical question to ask. Here a model of percolation phenomena, with an additional source of disorder, is introduced for a theoretical understanding of this problem. As in ordinary percolation, sites of a square lattice are occupied randomly with probability p . Each occupied site is then assigned a circular disk of random value R for its radius. A bond is defined to be occupied if and only if the radii R1 and R2 of the disks centered at the ends satisfy a certain predefined condition. In a very general formulation, one divides the R1-R2 plane into two regions by an arbitrary closed curve. One defines a point within one region as representing an occupied bond; otherwise it is a vacant bond. The study of three different rules under this general formulation indicates that the percolation threshold always varies continuously. This threshold has two limiting values, one is pc(sq) , the percolation threshold for the ordinary site percolation on the square lattice, and the other is unity. The approach of the percolation threshold to its limiting values are characterized by two exponents. In a special case, all lattice sites are occupied by disks of random radii R ∈{0 ,R0} and a percolation transition is observed with R0 as the control variable, similar to the site occupation probability.
CYP2D6 genotype and adjuvant tamoxifen: meta-analysis of heterogeneous study populations.
Province, M A; Goetz, M P; Brauch, H; Flockhart, D A; Hebert, J M; Whaley, R; Suman, V J; Schroth, W; Winter, S; Zembutsu, H; Mushiroda, T; Newman, W G; Lee, M-T M; Ambrosone, C B; Beckmann, M W; Choi, J-Y; Dieudonné, A-S; Fasching, P A; Ferraldeschi, R; Gong, L; Haschke-Becher, E; Howell, A; Jordan, L B; Hamann, U; Kiyotani, K; Krippl, P; Lambrechts, D; Latif, A; Langsenlehner, U; Lorizio, W; Neven, P; Nguyen, A T; Park, B-W; Purdie, C A; Quinlan, P; Renner, W; Schmidt, M; Schwab, M; Shin, J-G; Stingl, J C; Wegman, P; Wingren, S; Wu, A H B; Ziv, E; Zirpoli, G; Thompson, A M; Jordan, V C; Nakamura, Y; Altman, R B; Ames, M M; Weinshilboum, R M; Eichelbaum, M; Ingle, J N; Klein, T E
2014-02-01
The International Tamoxifen Pharmacogenomics Consortium was established to address the controversy regarding cytochrome P450 2D6 (CYP2D6) status and clinical outcomes in tamoxifen therapy. We performed a meta-analysis on data from 4,973 tamoxifen-treated patients (12 globally distributed sites). Using strict eligibility requirements (postmenopausal women with estrogen receptor-positive breast cancer, receiving 20 mg/day tamoxifen for 5 years, criterion 1); CYP2D6 poor metabolizer status was associated with poorer invasive disease-free survival (IDFS: hazard ratio = 1.25; 95% confidence interval = 1.06, 1.47; P = 0.009). However, CYP2D6 status was not statistically significant when tamoxifen duration, menopausal status, and annual follow-up were not specified (criterion 2, n = 2,443; P = 0.25) or when no exclusions were applied (criterion 3, n = 4,935; P = 0.38). Although CYP2D6 is a strong predictor of IDFS using strict inclusion criteria, because the results are not robust to inclusion criteria (these were not defined a priori), prospective studies are necessary to fully establish the value of CYP2D6 genotyping in tamoxifen therapy. PMID:24060820
Interparticle Attraction in 2D Complex Plasmas
NASA Astrophysics Data System (ADS)
Kompaneets, Roman; Morfill, Gregor E.; Ivlev, Alexei V.
2016-03-01
Complex (dusty) plasmas allow experimental studies of various physical processes occurring in classical liquids and solids by directly observing individual microparticles. A major problem is that the interaction between microparticles is generally not molecularlike. In this Letter, we propose how to achieve a molecularlike interaction potential in laboratory 2D complex plasmas. We argue that this principal aim can be achieved by using relatively small microparticles and properly adjusting discharge parameters. If experimentally confirmed, this will make it possible to employ complex plasmas as a model system with an interaction potential resembling that of conventional liquids.
Periodically sheared 2D Yukawa systems
Kovács, Anikó Zsuzsa; Hartmann, Peter; Donkó, Zoltán
2015-10-15
We present non-equilibrium molecular dynamics simulation studies on the dynamic (complex) shear viscosity of a 2D Yukawa system. We have identified a non-monotonic frequency dependence of the viscosity at high frequencies and shear rates, an energy absorption maximum (local resonance) at the Einstein frequency of the system at medium shear rates, an enhanced collective wave activity, when the excitation is near the plateau frequency of the longitudinal wave dispersion, and the emergence of significant configurational anisotropy at small frequencies and high shear rates.
ENERGY LANDSCAPE OF 2D FLUID FORMS
Y. JIANG; ET AL
2000-04-01
The equilibrium states of 2D non-coarsening fluid foams, which consist of bubbles with fixed areas, correspond to local minima of the total perimeter. (1) The authors find an approximate value of the global minimum, and determine directly from an image how far a foam is from its ground state. (2) For (small) area disorder, small bubbles tend to sort inwards and large bubbles outwards. (3) Topological charges of the same sign repel while charges of opposite sign attract. (4) They discuss boundary conditions and the uniqueness of the pattern for fixed topology.
A scalable 2-D parallel sparse solver
Kothari, S.C.; Mitra, S.
1995-12-01
Scalability beyond a small number of processors, typically 32 or less, is known to be a problem for existing parallel general sparse (PGS) direct solvers. This paper presents a parallel general sparse PGS direct solver for general sparse linear systems on distributed memory machines. The algorithm is based on the well-known sequential sparse algorithm Y12M. To achieve efficient parallelization, a 2-D scattered decomposition of the sparse matrix is used. The proposed algorithm is more scalable than existing parallel sparse direct solvers. Its scalability is evaluated on a 256 processor nCUBE2s machine using Boeing/Harwell benchmark matrices.
2D stepping drive for hyperspectral systems
NASA Astrophysics Data System (ADS)
Endrödy, Csaba; Mehner, Hannes; Grewe, Adrian; Sinzinger, Stefan; Hoffmann, Martin
2015-07-01
We present the design, fabrication and characterization of a compact 2D stepping microdrive for pinhole array positioning. The miniaturized solution enables a highly integrated compact hyperspectral imaging system. Based on the geometry of the pinhole array, an inch-worm drive with electrostatic actuators was designed resulting in a compact (1 cm2) positioning system featuring a step size of about 15 µm in a 170 µm displacement range. The high payload (20 mg) as required for the pinhole array and the compact system design exceed the known electrostatic inch-worm-based microdrives.
A Conductivity and Dielectric Constant of Systems Near the Percolation Threshold.
NASA Astrophysics Data System (ADS)
Song, Yi.
The ac conductivity and dielectric constant of macroscopically inhomogeneous systems near the percolation threshold vary as a power of the frequency, with (sigma) (PROPORTIONAL) (omega)('x), and (epsilon) (PROPORTIONAL) (omega)('-y). The two critical exponents x and y should satisfy a general scaling relation x + y = 1, if (sigma) and (epsilon) both obey scaling forms that have a single characteristic time scale. Two different percolation systems were studied experi- mentally in order to find the critical exponents x and y. The ac con- ductance and capacitance of these two systems were measured in the frequency range from 10 Hz to 13 MHz. The ac conductivity exponent x and ac dielectric constant exponent y from a three dimensional randomly mixed carbon-teflon system were found to be 0.86 (+OR-) 0.06 and 0.12 (+OR-) 0.04, respectively. The same critical exponents x and y were obtained on a planar chromium film system. Their values were x = 0.98 (+OR-) 0.09 and y = 0.08 (+OR-) 0.04. In order to complete the study, the dc conductivity exponent t and dc dielectric constant exponent s of these systems were also measured. They were in good agreement with well-established values. Two important mechanisms are responsible for the power law dependence of the ac conductivity and dielectric constant of systems near the percolation threshold. They are the interaction between percolation clusters and the fractal nature of these clus- ters. Two independent models based on these two mechanisms separately, namely the intercluster polarization (IP) model and the anomalous diffusion (AD) model, both predict power law behavior for (sigma) and (epsilon). The IP model predicts x (DBLTURN) 0.72 and y (DBLTURN) 0.28 for three dimensional (3D) systems and x = y = 0.5 for two dimensional (2D) systems; while the AD model predicts x (DBLTURN) 0.58 and y (DBLTURN) 0.42 for 3D systems and x (DBLTURN) 0.33 and y (DBLTURN) 0.67 for 2D systems. The experimental results of the ac conductivity
WFR-2D: an analytical model for PWAS-generated 2D ultrasonic guided wave propagation
NASA Astrophysics Data System (ADS)
Shen, Yanfeng; Giurgiutiu, Victor
2014-03-01
This paper presents WaveFormRevealer 2-D (WFR-2D), an analytical predictive tool for the simulation of 2-D ultrasonic guided wave propagation and interaction with damage. The design of structural health monitoring (SHM) systems and self-aware smart structures requires the exploration of a wide range of parameters to achieve best detection and quantification of certain types of damage. Such need for parameter exploration on sensor dimension, location, guided wave characteristics (mode type, frequency, wavelength, etc.) can be best satisfied with analytical models which are fast and efficient. The analytical model was constructed based on the exact 2-D Lamb wave solution using Bessel and Hankel functions. Damage effects were inserted in the model by considering the damage as a secondary wave source with complex-valued directivity scattering coefficients containing both amplitude and phase information from wave-damage interaction. The analytical procedure was coded with MATLAB, and a predictive simulation tool called WaveFormRevealer 2-D was developed. The wave-damage interaction coefficients (WDICs) were extracted from harmonic analysis of local finite element model (FEM) with artificial non-reflective boundaries (NRB). The WFR-2D analytical simulation results were compared and verified with full scale multiphysics finite element models and experiments with scanning laser vibrometer. First, Lamb wave propagation in a pristine aluminum plate was simulated with WFR-2D, compared with finite element results, and verified by experiments. Then, an inhomogeneity was machined into the plate to represent damage. Analytical modeling was carried out, and verified by finite element simulation and experiments. This paper finishes with conclusions and suggestions for future work.
Microwave Assisted 2D Materials Exfoliation
NASA Astrophysics Data System (ADS)
Wang, Yanbin
Two-dimensional materials have emerged as extremely important materials with applications ranging from energy and environmental science to electronics and biology. Here we report our discovery of a universal, ultrafast, green, solvo-thermal technology for producing excellent-quality, few-layered nanosheets in liquid phase from well-known 2D materials such as such hexagonal boron nitride (h-BN), graphite, and MoS2. We start by mixing the uniform bulk-layered material with a common organic solvent that matches its surface energy to reduce the van der Waals attractive interactions between the layers; next, the solutions are heated in a commercial microwave oven to overcome the energy barrier between bulk and few-layers states. We discovered the minutes-long rapid exfoliation process is highly temperature dependent, which requires precise thermal management to obtain high-quality inks. We hypothesize a possible mechanism of this proposed solvo-thermal process; our theory confirms the basis of this novel technique for exfoliation of high-quality, layered 2D materials by using an as yet unknown role of the solvent.
Photocurrent spectroscopy of 2D materials
NASA Astrophysics Data System (ADS)
Cobden, David
Confocal photocurrent measurements provide a powerful means of studying many aspects of the optoelectronic and electrical properties of a 2D device or material. At a diffraction-limited point they can provide a detailed absorption spectrum, and they can probe local symmetry, ultrafast relaxation rates and processes, electron-electron interaction strengths, and transport coefficients. We illustrate this with several examples, once being the photo-Nernst effect. In gapless 2D materials, such as graphene, in a perpendicular magnetic field a photocurrent antisymmetric in the field is generated near to the free edges, with opposite sign at opposite edges. Its origin is the transverse thermoelectric current associated with the laser-induced electron temperature gradient. This effect provides an unambiguous demonstration of the Shockley-Ramo nature of long-range photocurrent generation in gapless materials. It also provides a means of investigating quasiparticle properties. For example, in the case of graphene on hBN, it can be used to probe the Lifshitz transition that occurs due to the minibands formed by the Moire superlattice. We also observe and discuss photocurrent generated in other semimetallic (WTe2) and semiconducting (WSe2) monolayers. Work supported by DoE BES and NSF EFRI grants.
Multienzyme Inkjet Printed 2D Arrays.
Gdor, Efrat; Shemesh, Shay; Magdassi, Shlomo; Mandler, Daniel
2015-08-19
The use of printing to produce 2D arrays is well established, and should be relatively facile to adapt for the purpose of printing biomaterials; however, very few studies have been published using enzyme solutions as inks. Among the printing technologies, inkjet printing is highly suitable for printing biomaterials and specifically enzymes, as it offers many advantages. Formulation of the inkjet inks is relatively simple and can be adjusted to a variety of biomaterials, while providing nonharmful environment to the enzymes. Here we demonstrate the applicability of inkjet printing for patterning multiple enzymes in a predefined array in a very straightforward, noncontact method. Specifically, various arrays of the enzymes glucose oxidase (GOx), invertase (INV) and horseradish peroxidase (HP) were printed on aminated glass surfaces, followed by immobilization using glutardialdehyde after printing. Scanning electrochemical microscopy (SECM) was used for imaging the printed patterns and to ascertain the enzyme activity. The successful formation of 2D arrays consisting of enzymes was explored as a means of developing the first surface confined enzyme based logic gates. Principally, XOR and AND gates, each consisting of two enzymes as the Boolean operators, were assembled, and their operation was studied by SECM. PMID:26214072
Viscosity and thermal conductivity of stable graphite suspensions near percolation.
Ma, Lei; Wang, Jianjian; Marconnet, Amy M; Barbati, Alexander C; McKinley, Gareth H; Liu, Wei; Chen, Gang
2015-01-14
Nanofluids have received much attention in part due to the range of properties possible with different combinations of nanoparticles and base fluids. In this work, we measure the viscosity of suspensions of graphite particles in ethylene glycol as a function of the volume fraction, shear rate, and temperature below and above the percolation threshold. We also measure and contrast the trends observed in the viscosity with increasing volume fraction to the thermal conductivity behavior of the same suspensions: above the percolation threshold, the slope that describes the rate of thermal conductivity enhancement with concentration reduces compared to below the percolation threshold, whereas that of the viscosity enhancement increases. While the thermal conductivity enhancement is independent of temperature, the viscosity changes show a strong dependence on temperature and exhibit different trends with respect to the temperature at different shear rates above the percolation threshold. Interpretation of the experimental observations is provided within the framework of Stokesian dynamics simulations of the suspension microstructure and suggests that although diffusive contributions are not important for the observed thermal conductivity enhancement, they are important for understanding the variations in the viscosity with changes of temperature and shear rate above the percolation threshold. The experimental results can be collapsed to a single master curve through calculation of a single dimensionless parameter (a Péclet number based on the rotary diffusivity of the graphite particles). PMID:25469709
Bounds for percolation thresholds on directed and undirected graphs
NASA Astrophysics Data System (ADS)
Hamilton, Kathleen; Pryadko, Leonid
2015-03-01
Percolation theory is an efficient approach to problems with strong disorder, e.g., in quantum or classical transport, composite materials, and diluted magnets. Recently, the growing role of big data in scientific and industrial applications has led to a renewed interest in graph theory as a tool for describing complex connections in various kinds of networks: social, biological, technological, etc. In particular, percolation on graphs has been used to describe internet stability, spread of contagious diseases and computer viruses; related models describe market crashes and viral spread in social networks. We consider site-dependent percolation on directed and undirected graphs, and present several exact bounds for location of the percolation transition in terms of the eigenvalues of matrices associated with graphs, including the adjacency matrix and the Hashimoto matrix used to enumerate non-backtracking walks. These bounds correspond t0 a mean field approximation and become asymptotically exact for graphs with no short cycles. We illustrate this convergence numerically by simulating percolation on several families of graphs with different cycle lengths. This research was supported in part by the NSF Grant PHY-1416578 and by the ARO Grant W911NF-11-1-0027.
Memory decay and loss of criticality in quorum percolation.
Renault, Renaud; Monceau, Pascal; Bottani, Samuel
2013-12-01
In this paper, we present the effects of memory decay on a bootstrap percolation model applied to random directed graphs (quorum percolation). The addition of decay was motivated by its natural occurrence in physical systems previously described by percolation theory, such as cultured neuronal networks, where decay originates from ionic leakage through the membrane of neurons and/or synaptic depression. Surprisingly, this feature alone appears to change the critical behavior of the percolation transition, where discontinuities are replaced by steep but finite slopes. Using different numerical approaches, we show evidence for this qualitative change even for very small decay values. In experiments where the steepest slopes can not be resolved and still appear as discontinuities, decay produces nonetheless a quantitative difference on the location of the apparent critical point. We discuss how this shift impacts network connectivity previously estimated without considering decay. In addition to this particular example, we believe that other percolation models are worth reinvestigating, taking into account similar sorts of memory decay. PMID:24483413
Two-dimensional percolation threshold in confined Si nanoparticle networks
NASA Astrophysics Data System (ADS)
Laube, J.; Gutsch, S.; Wang, D.; Kübel, C.; Zacharias, M.; Hiller, D.
2016-01-01
Non-percolating and percolating silicon quantum dot (QD) networks were investigated by plane-view energy filtered transmission electron microscopy (EF-TEM). The Si QD networks were prepared by plasma enhanced chemical vapor deposition on free standing 5 nm Si3N4 membranes, followed by high temperature annealing. The percolation threshold from non-percolating to percolating networks is found to be in between a SiOx stoichiometry of SiO0.5 up to SiO0.7. Using the EF-TEM images, key structural parameters of the Si QD ensemble were extracted and compared, i.e., their size distribution, nearest neighbor distance, and circularity. Increasing the silicon excess within the SiOx layer results in an ensemble of closer spaced, less size-controlled, and less circular Si QDs that give rise to coupling effects. Furthermore, the influence of the structural parameters on the optical and electrical Si QD ensemble properties is discussed.
2-D or not 2-D, that is the question: A Northern California test
Mayeda, K; Malagnini, L; Phillips, W S; Walter, W R; Dreger, D
2005-06-06
Reliable estimates of the seismic source spectrum are necessary for accurate magnitude, yield, and energy estimation. In particular, how seismic radiated energy scales with increasing earthquake size has been the focus of recent debate within the community and has direct implications on earthquake source physics studies as well as hazard mitigation. The 1-D coda methodology of Mayeda et al. has provided the lowest variance estimate of the source spectrum when compared against traditional approaches that use direct S-waves, thus making it ideal for networks that have sparse station distribution. The 1-D coda methodology has been mostly confined to regions of approximately uniform complexity. For larger, more geophysically complicated regions, 2-D path corrections may be required. The complicated tectonics of the northern California region coupled with high quality broadband seismic data provides for an ideal ''apples-to-apples'' test of 1-D and 2-D path assumptions on direct waves and their coda. Using the same station and event distribution, we compared 1-D and 2-D path corrections and observed the following results: (1) 1-D coda results reduced the amplitude variance relative to direct S-waves by roughly a factor of 8 (800%); (2) Applying a 2-D correction to the coda resulted in up to 40% variance reduction from the 1-D coda results; (3) 2-D direct S-wave results, though better than 1-D direct waves, were significantly worse than the 1-D coda. We found that coda-based moment-rate source spectra derived from the 2-D approach were essentially identical to those from the 1-D approach for frequencies less than {approx}0.7-Hz, however for the high frequencies (0.7{le} f {le} 8.0-Hz), the 2-D approach resulted in inter-station scatter that was generally 10-30% smaller. For complex regions where data are plentiful, a 2-D approach can significantly improve upon the simple 1-D assumption. In regions where only 1-D coda correction is available it is still preferable over 2
NASA Astrophysics Data System (ADS)
Pfeffer, Michael; Kumar, Praveen; Eibl, Oliver
2016-08-01
Resistive losses corresponding to the front-side metallization limit the efficiency of Si solar cells. At the front-side contact, the Si emitter is covered by a glass layer that is less than 1 μm thick embedded with Ag colloids to volume fraction >20%. Bulk Ag fingers are arranged on top of the glass layer. A similar microstructure is found for both n-type and p-type cells showing high efficiency. The Ag colloids constitute current filaments with reduced resistance in the glass layer, thereby introducing a percolative current which is the basis of the proposed model. This model is new and differs from the classical percolation model in its direct reliance on the macroscopic resistance of these filaments, and in considering the matrix as semiconducting rather than insulating. For periodically arranged Ag colloids of fixed diameter, the percolative limit of 13% in two dimensions (2D) and 15% in three dimensions (3D) depends only on the volume fraction of colloids but not their size. The resistance of randomly arranged and sized Ag colloids confirms the analytical results. The model explains quantitatively, consistent with microstructural analyses, why low contact resistances are found in solar cells with high colloid density. The introduced percolation model is also relevant for other systems in which metallic precipitates are found in a semiconducting matrix.
Revisiting the percolation phenomena in dielectric composites with conducting fillers
NASA Astrophysics Data System (ADS)
Zhang, Lin; Bass, Patrick; Cheng, Z.-Y.
2014-07-01
The composition (φ) dependence of the effective dielectric constant (ɛeff) on conductor-dielectric composites is widely described as ɛeff∝(φc-φ)-s. This relationship has been extensively used to fit experimental results for determining the percolation behavior (percolation threshold φc and power constant s). The equation was checked using experimental results from two 0-3 nanocomposite systems with uniform microstructures. It is found that the equation can be used to fit the experimental results, but the fitting constants (φc and s) do not reflect the percolation behavior: the values of both fitting constants are dependent on the frequency (f) and temperature selected. It is also found that the fitting constant φc increases with increasing frequency selected and it is believed that this arises from the critical phenomenon, ɛeff∝fγ-1, for composites close to the φc.
Absorbing-state phase transitions on percolating lattices.
Lee, Man Young; Vojta, Thomas
2009-04-01
We study nonequilibrium phase transitions of reaction-diffusion systems defined on randomly diluted lattices, focusing on the transition across the lattice percolation threshold. To develop a theory for this transition, we combine classical percolation theory with the properties of the supercritical nonequilibrium system on a finite-size cluster. In the case of the contact process, the interplay between geometric criticality due to percolation and dynamical fluctuations of the nonequilibrium system leads to a different universality class. The critical point is characterized by ultraslow activated dynamical scaling and accompanied by strong Griffiths singularities. To confirm the universality of this exotic scaling scenario we also study the generalized contact process with several (symmetric) absorbing states and we support our theory by extensive Monte Carlo simulations. PMID:19518178
Percolation-based precursors of transitions in extended systems
Rodríguez-Méndez, Víctor; Eguíluz M, Víctor M.; Hernández-García, Emilio; Ramasco, José J.
2016-01-01
Abrupt transitions are ubiquitous in the dynamics of complex systems. Finding precursors, i.e. early indicators of their arrival, is fundamental in many areas of science ranging from electrical engineering to climate. However, obtaining warnings of an approaching transition well in advance remains an elusive task. Here we show that a functional network, constructed from spatial correlations of the system’s time series, experiences a percolation transition way before the actual system reaches a bifurcation point due to the collective phenomena leading to the global change. Concepts from percolation theory are then used to introduce early warning precursors that anticipate the system’s tipping point. We illustrate the generality and versatility of our percolation-based framework with model systems experiencing different types of bifurcations and with Sea Surface Temperature time series associated to El Niño phenomenon. PMID:27412567
Percolation-based precursors of transitions in extended systems.
Rodríguez-Méndez, Víctor; Eguíluz M, Víctor M; Hernández-García, Emilio; Ramasco, José J
2016-01-01
Abrupt transitions are ubiquitous in the dynamics of complex systems. Finding precursors, i.e. early indicators of their arrival, is fundamental in many areas of science ranging from electrical engineering to climate. However, obtaining warnings of an approaching transition well in advance remains an elusive task. Here we show that a functional network, constructed from spatial correlations of the system's time series, experiences a percolation transition way before the actual system reaches a bifurcation point due to the collective phenomena leading to the global change. Concepts from percolation theory are then used to introduce early warning precursors that anticipate the system's tipping point. We illustrate the generality and versatility of our percolation-based framework with model systems experiencing different types of bifurcations and with Sea Surface Temperature time series associated to El Niño phenomenon. PMID:27412567
Percolation-based precursors of transitions in extended systems
NASA Astrophysics Data System (ADS)
Rodríguez-Méndez, Víctor; Eguíluz M, Víctor M.; Hernández-García, Emilio; Ramasco, José J.
2016-07-01
Abrupt transitions are ubiquitous in the dynamics of complex systems. Finding precursors, i.e. early indicators of their arrival, is fundamental in many areas of science ranging from electrical engineering to climate. However, obtaining warnings of an approaching transition well in advance remains an elusive task. Here we show that a functional network, constructed from spatial correlations of the system’s time series, experiences a percolation transition way before the actual system reaches a bifurcation point due to the collective phenomena leading to the global change. Concepts from percolation theory are then used to introduce early warning precursors that anticipate the system’s tipping point. We illustrate the generality and versatility of our percolation-based framework with model systems experiencing different types of bifurcations and with Sea Surface Temperature time series associated to El Niño phenomenon.
Conductivity in percolation networks with broad distributions of resistances
NASA Astrophysics Data System (ADS)
Machta, J.; Guyer, R. A.; Moore, S. M.
1986-04-01
Diluted resistor networks with a broad distribution of resistances are studied near the percolation threshold. A hierarchical model of the backbone of the percolation cluster is employed. Resistor networks are considered where the resistors, R, are chosen from a distribution having a power-law tail such that Prob\\{R>X\\}~X-α as X-->∞, 0<α<1. Such distributions arise naturally in con- tinuum percolation systems. The hierarchical model is studied numerically and using a renormalization-group transformation for the distribution of resistances. The conclusion is that the conductivity exponent t is the greater of to and (d-2)ν+1/α where to is the universal value of the conductivity exponent and ν is the correlation-length exponent. This result is in agreement with Straley's earlier predictions [J. Phys. C 15, 2333 (1982); 15, 2343 (1982)].
Explosive percolation: Unusual transitions of a simple model
NASA Astrophysics Data System (ADS)
Bastas, N.; Giazitzidis, P.; Maragakis, M.; Kosmidis, K.
In this paper we review the recent advances in explosive percolation, a very sharp phase transition first observed by Achlioptas et al. (2009). There a simple model was proposed, which changed slightly the classical percolation process so that the emergence of the spanning cluster is delayed. This slight modification turns out to have a great impact on the percolation phase transition. The resulting transition is so sharp that it was termed explosive, and it was at first considered to be discontinuous. This surprising fact stimulated considerable interest in “Achlioptas processes”. Later work, however, showed that the transition is continuous (at least for Achlioptas processes on Erdös networks), but with very unusual finite size scaling. We present a review of the field, indicate open “problems” and propose directions for future research.
Fast and accurate database searches with MS-GF+Percolator.
Granholm, Viktor; Kim, Sangtae; Navarro, José C F; Sjölund, Erik; Smith, Richard D; Käll, Lukas
2014-02-01
One can interpret fragmentation spectra stemming from peptides in mass-spectrometry-based proteomics experiments using so-called database search engines. Frequently, one also runs post-processors such as Percolator to assess the confidence, infer unique peptides, and increase the number of identifications. A recent search engine, MS-GF+, has shown promising results, due to a new and efficient scoring algorithm. However, MS-GF+ provides few statistical estimates about the peptide-spectrum matches, hence limiting the biological interpretation. Here, we enabled Percolator processing for MS-GF+ output and observed an increased number of identified peptides for a wide variety of data sets. In addition, Percolator directly reports p values and false discovery rate estimates, such as q values and posterior error probabilities, for peptide-spectrum matches, peptides, and proteins, functions that are useful for the whole proteomics community. PMID:24344789
Fast and accurate database searches with MS-GF+Percolator
Granholm, Viktor; Kim, Sangtae; Navarro, Jose' C.; Sjolund, Erik; Smith, Richard D.; Kall, Lukas
2014-02-28
To identify peptides and proteins from the large number of fragmentation spectra in mass spectrometrybased proteomics, researches commonly employ so called database search engines. Additionally, postprocessors like Percolator have been used on the results from such search engines, to assess confidence, infer peptides and generally increase the number of identifications. A recent search engine, MS-GF+, has previously been showed to out-perform these classical search engines in terms of the number of identified spectra. However, MS-GF+ generates only limited statistical estimates of the results, hence hampering the biological interpretation. Here, we enabled Percolator-processing for MS-GF+ output, and observed an increased number of identified peptides for a wide variety of datasets. In addition, Percolator directly reports false discovery rate estimates, such as q values and posterior error probabilities, as well as p values, for peptide-spectrum matches, peptides and proteins, functions useful for the whole proteomics community.
Connectivity percolation in suspensions of attractive square-well spherocylinders
NASA Astrophysics Data System (ADS)
Dixit, Mohit; Meyer, Hugues; Schilling, Tanja
2016-01-01
We have studied the connectivity percolation transition in suspensions of attractive square-well spherocylinders by means of Monte Carlo simulation and connectedness percolation theory. In the 1980s the percolation threshold of slender fibers has been predicted to scale as the fibers' inverse aspect ratio [Phys. Rev. B 30, 3933 (1984), 10.1103/PhysRevB.30.3933]. The main finding of our study is that the attractive spherocylinder system reaches this inverse scaling regime at much lower aspect ratios than found in suspensions of hard spherocylinders. We explain this difference by showing that third virial corrections of the pair connectedness functions, which are responsible for the deviation from the scaling regime, are less important for attractive potentials than for hard particles.
Connecting core percolation and controllability of complex networks.
Jia, Tao; Pósfai, Márton
2014-01-01
Core percolation is a fundamental structural transition in complex networks related to a wide range of important problems. Recent advances have provided us an analytical framework of core percolation in uncorrelated random networks with arbitrary degree distributions. Here we apply the tools in analysis of network controllability. We confirm analytically that the emergence of the bifurcation in control coincides with the formation of the core and the structure of the core determines the control mode of the network. We also derive the analytical expression related to the controllability robustness by extending the deduction in core percolation. These findings help us better understand the interesting interplay between the structural and dynamical properties of complex networks. PMID:24946797
Guo, En-Yu; Chawla, Nikhilesh; Jing, Tao; Torquato, Salvatore; Jiao, Yang
2014-03-01
Heterogeneous materials are ubiquitous in nature and synthetic situations and have a wide range of important engineering applications. Accurate modeling and reconstructing three-dimensional (3D) microstructure of topologically complex materials from limited morphological information such as a two-dimensional (2D) micrograph is crucial to the assessment and prediction of effective material properties and performance under extreme conditions. Here, we extend a recently developed dilation–erosion method and employ the Yeong–Torquato stochastic reconstruction procedure to model and generate 3D austenitic–ferritic cast duplex stainless steel microstructure containing percolating filamentary ferrite phase from 2D optical micrographs of the material sample. Specifically, the ferrite phase is dilated to produce a modified target 2D microstructure and the resulting 3D reconstruction is eroded to recover the percolating ferrite filaments. The dilation–erosion reconstruction is compared with the actual 3D microstructure, obtained from serial sectioning (polishing), as well as the standard stochastic reconstructions incorporating topological connectedness information. The fact that the former can achieve the same level of accuracy as the latter suggests that the dilation–erosion procedure is tantamount to incorporating appreciably more topological and geometrical information into the reconstruction while being much more computationally efficient. - Highlights: • Spatial correlation functions used to characterize filamentary ferrite phase • Clustering information assessed from 3D experimental structure via serial sectioning • Stochastic reconstruction used to generate 3D virtual structure 2D micrograph • Dilation–erosion method to improve accuracy of 3D reconstruction.
Numerical Evaluation of 2D Ground States
NASA Astrophysics Data System (ADS)
Kolkovska, Natalia
2016-02-01
A ground state is defined as the positive radial solution of the multidimensional nonlinear problem
Canard configured aircraft with 2-D nozzle
NASA Technical Reports Server (NTRS)
Child, R. D.; Henderson, W. P.
1978-01-01
A closely-coupled canard fighter with vectorable two-dimensional nozzle was designed for enhanced transonic maneuvering. The HiMAT maneuver goal of a sustained 8g turn at a free-stream Mach number of 0.9 and 30,000 feet was the primary design consideration. The aerodynamic design process was initiated with a linear theory optimization minimizing the zero percent suction drag including jet effects and refined with three-dimensional nonlinear potential flow techniques. Allowances were made for mutual interference and viscous effects. The design process to arrive at the resultant configuration is described, and the design of a powered 2-D nozzle model to be tested in the LRC 16-foot Propulsion Wind Tunnel is shown.
2D Electrostatic Actuation of Microshutter Arrays
NASA Technical Reports Server (NTRS)
Burns, Devin E.; Oh, Lance H.; Li, Mary J.; Jones, Justin S.; Kelly, Daniel P.; Zheng, Yun; Kutyrev, Alexander S.; Moseley, Samuel H.
2015-01-01
An electrostatically actuated microshutter array consisting of rotational microshutters (shutters that rotate about a torsion bar) were designed and fabricated through the use of models and experiments. Design iterations focused on minimizing the torsional stiffness of the microshutters, while maintaining their structural integrity. Mechanical and electromechanical test systems were constructed to measure the static and dynamic behavior of the microshutters. The torsional stiffness was reduced by a factor of four over initial designs without sacrificing durability. Analysis of the resonant behavior of the microshutter arrays demonstrates that the first resonant mode is a torsional mode occurring around 3000 Hz. At low vacuum pressures, this resonant mode can be used to significantly reduce the drive voltage necessary for actuation requiring as little as 25V. 2D electrostatic latching and addressing was demonstrated using both a resonant and pulsed addressing scheme.
2D Electrostatic Actuation of Microshutter Arrays
NASA Technical Reports Server (NTRS)
Burns, Devin E.; Oh, Lance H.; Li, Mary J.; Kelly, Daniel P.; Kutyrev, Alexander S.; Moseley, Samuel H.
2015-01-01
Electrostatically actuated microshutter arrays consisting of rotational microshutters (shutters that rotate about a torsion bar) were designed and fabricated through the use of models and experiments. Design iterations focused on minimizing the torsional stiffness of the microshutters, while maintaining their structural integrity. Mechanical and electromechanical test systems were constructed to measure the static and dynamic behavior of the microshutters. The torsional stiffness was reduced by a factor of four over initial designs without sacrificing durability. Analysis of the resonant behavior of the microshutters demonstrates that the first resonant mode is a torsional mode occurring around 3000 Hz. At low vacuum pressures, this resonant mode can be used to significantly reduce the drive voltage necessary for actuation requiring as little as 25V. 2D electrostatic latching and addressing was demonstrated using both a resonant and pulsed addressing scheme.
Graphene suspensions for 2D printing
NASA Astrophysics Data System (ADS)
Soots, R. A.; Yakimchuk, E. A.; Nebogatikova, N. A.; Kotin, I. A.; Antonova, I. V.
2016-04-01
It is shown that, by processing a graphite suspension in ethanol or water by ultrasound and centrifuging, it is possible to obtain particles with thicknesses within 1-6 nm and, in the most interesting cases, 1-1.5 nm. Analogous treatment of a graphite suspension in organic solvent yields eventually thicker particles (up to 6-10 nm thick) even upon long-term treatment. Using the proposed ink based on graphene and aqueous ethanol with ethylcellulose and terpineol additives for 2D printing, thin (~5 nm thick) films with sheet resistance upon annealing ~30 MΩ/□ were obtained. With the ink based on aqueous graphene suspension, the sheet resistance was ~5-12 kΩ/□ for 6- to 15-nm-thick layers with a carrier mobility of ~30-50 cm2/(V s).
Correlated percolation models of structured habitat in ecology
NASA Astrophysics Data System (ADS)
Huth, Géraldine; Lesne, Annick; Munoz, François; Pitard, Estelle
2014-12-01
Percolation offers acknowledged models of random media when the relevant medium characteristics can be described as a binary feature. However, when considering habitat modeling in ecology, a natural constraint comes from nearest-neighbor correlations between the suitable/unsuitable states of the spatial units forming the habitat. Such constraints are also relevant in the physics of aggregation where underlying processes may lead to a form of correlated percolation. However, in ecology, the processes leading to habitat correlations are in general not known or very complex. As proposed by Hiebeler (2000), these correlations can be captured in a lattice model by an observable aggregation parameter q, supplementing the density p of suitable sites. We investigate this model as an instance of correlated percolation. We analyze the phase diagram of the percolation transition and compute the cluster size distribution, the pair-connectedness function C(r) and the correlation function g(r). We find that while g(r) displays a power-law decrease associated with long-range correlations in a wide domain of parameter values, critical properties are compatible with the universality class of uncorrelated percolation. We contrast the correlation structures obtained respectively for the correlated percolation model and for the Ising model, and show that the diversity of habitat configurations generated by the Hiebeler model is richer than the archetypal Ising model. We also find that emergent structural properties are peculiar to the implemented algorithm, leading to questioning the notion of a well-defined model of aggregated habitat. We conclude that the choice of model and algorithm has strong consequences on what insights ecological studies can get using such models of species habitat.
Gas transport through magma near the percolation threshold (Invited)
NASA Astrophysics Data System (ADS)
Llewellin, E. W.; Blower, J.; Leslie, D.
2009-12-01
Explosive silicic eruptions may simultaneously produce both tube pumice - containing highly-elongate vesicles - and pumice containing sub-spherical vesicles. This has been cited as evidence for strain localization within the volcanic conduit: in a relatively-undeformed axial ‘plug’ bubbles are spherical (regime 1) whilst near the conduit margin rapidly-shearing magma bears elongate bubbles (regime 2). Published numerical studies support this model and indicate that bubbly-magma rheology or viscous heating may be responsible for strain localization. The difference in bubble morphology in these two regimes has important consequences for magma permeability. We present the results of fluid dynamic simulations which quantify the anisotropy of permeability in regime 2 as a function of gas volume fraction and bubble aspect ratio. In this regime, we find that vertical permeability may be many times greater than radial permeability, and that permeability anisotropy is most pronounced near the percolation threshold. We further use a network model to quantify the development of permeability in regime 1. In the case where the predominantly vertical expansion of the magma is slow compared with bubble relaxation time, we find that permeability is, again, anisotropic, but that radial permeability dominates. This effect is also most pronounced near the percolation threshold, and percolation is expected to occur radially before vertical percolation occurs. Our findings imply that gas transport in regime 1 is predominantly radial, whilst vertical gas transport is favoured in regime 2. Consequently, near the percolation threshold, conditions are appropriate for effective degassing of the central magma plug as gas permeates radially to the conduit margin and then vertically upwards. Repeated cycles of percolation, radial gas loss and densification may degas the central magma plug without the development of large gas volume fractions.
Metrology for graphene and 2D materials
NASA Astrophysics Data System (ADS)
Pollard, Andrew J.
2016-09-01
The application of graphene, a one atom-thick honeycomb lattice of carbon atoms with superlative properties, such as electrical conductivity, thermal conductivity and strength, has already shown that it can be used to benefit metrology itself as a new quantum standard for resistance. However, there are many application areas where graphene and other 2D materials, such as molybdenum disulphide (MoS2) and hexagonal boron nitride (h-BN), may be disruptive, areas such as flexible electronics, nanocomposites, sensing and energy storage. Applying metrology to the area of graphene is now critical to enable the new, emerging global graphene commercial world and bridge the gap between academia and industry. Measurement capabilities and expertise in a wide range of scientific areas are required to address this challenge. The combined and complementary approach of varied characterisation methods for structural, chemical, electrical and other properties, will allow the real-world issues of commercialising graphene and other 2D materials to be addressed. Here, examples of metrology challenges that have been overcome through a multi-technique or new approach are discussed. Firstly, the structural characterisation of defects in both graphene and MoS2 via Raman spectroscopy is described, and how nanoscale mapping of vacancy defects in graphene is also possible using tip-enhanced Raman spectroscopy (TERS). Furthermore, the chemical characterisation and removal of polymer residue on chemical vapour deposition (CVD) grown graphene via secondary ion mass spectrometry (SIMS) is detailed, as well as the chemical characterisation of iron films used to grow large domain single-layer h-BN through CVD growth, revealing how contamination of the substrate itself plays a role in the resulting h-BN layer. In addition, the role of international standardisation in this area is described, outlining the current work ongoing in both the International Organization of Standardization (ISO) and the
Hirobe, Tomohisa; Ito, Shosuke; Wakamatsu, Kazumasa
2013-09-01
The novel mutation named ru2(d) /Hps5(ru2-d) , characterized by light-colored coats and ruby-eyes, prohibits differentiation of melanocytes by inhibiting tyrosinase (Tyr) activity, expression of Tyr, Tyr-related protein 1 (Tyrp1), Tyrp2, and Kit. However, it is not known whether the ru2(d) allele affects pheomelanin synthesis in recessive yellow (e/Mc1r(e) ) or in pheomelanic stage in agouti (A) mice. In this study, effects of the ru2(d) allele on pheomelanin synthesis were investigated by chemical analysis of melanin present in dorsal hairs of 5-week-old mice from F2 generation between C57BL/10JHir (B10)-co-isogenic ruby-eye 2(d) and B10-congenic recessive yellow or agouti. Eumelanin content was decreased in ruby-eye 2(d) and ruby-eye 2(d) agouti mice, whereas pheomelanin content in ruby-eye 2(d) recessive yellow and ruby-eye 2(d) agouti mice did not differ from the corresponding Ru2(d) /- mice, suggesting that the ru2(d) allele inhibits eumelanin but not pheomelanin synthesis. PMID:23672590
Percolation models for boiling and bubble growth in porous media
Yortsos, Y.C.
1991-05-01
We analyze the liquid-to-vapor phase change in single-component fluids in porous media at low superheats. Conditions typical to steam injection in porous media are taken. We examine nucleation, phase equilibria and their stability, and the growth of vapor bubbles. Effects of pore structure are emphasized. It is shown that at low supersaturations, bubble growth can be described as a percolation process. In the absence of spatial gradients, macroscopic flow properties are calculated in terms of nucleation parameters. A modification of gradient percolation is also proposed in the case of spatial temperature gradients, when solid conduction predominates. 22 refs., 10 figs., 1 tab.
Interaction between a percolation network and a cubic cavity
NASA Astrophysics Data System (ADS)
Mourzenko, Valeri; Adler, Pierre; Thovert, Jean Francois; Sangaré, Daouda
2015-04-01
The intersection between a percolating network of fractures modeled as polygons and a cubic cavity is important for the safe storage of wastes in a fractured medium. The cavities where the wastes are stored should not intersect the percolating network of fractures which may exist, or these cavities should not enable a fracture network to percolate. The fractures are hexagons inscribed in a circle of radius R which are uniformly distributed in space and isotropically oriented. Nfr is the number of fractures generated in a finite unit cell Omega of size L^3. The fracture density is conveniently represented by the dimensionless density rho ' which is the average number of intersections per fracture with the other fractures [1]. In addition, a cubic cavity C formed by six squares inscribed in a circle of radius Rs is randomly located in Omega. N spatially periodic networks are generated. Generally, N is equal to 500. Among these N networks, Np percolate and the cavity intersects one or more fractures in Nrc realizations; no fracture-cavity intersection occurs in Nnrc realizations. Moreover, when the network alone does not percolate (which occurs in Nnp realisations), the set composed by the hexagons and the cavity percolates Nnpc times. These quantities and the corresponding probabilities were systematically calculated as functions of L' = L/R , R' s = R_s/R and rho'. An important quantity is the conditional probability Pic that the percolating cluster intersects the cavity when it exists. It could be extrapolated to an infinite cell size L'. This conditional probability is an increasing function of rho' and of R' _s. The probability Pi that an object X intersects the fracture network with the density rho is given by the expression Pi=1-exp(- rho V) where V is the excluded volume for the object X and a fracture. This quantity is obtained for a cube. This prediction is in good agreement with the conditional probability Pic for large rho' or small R_s. However, Pi and
Scaling of the spanning threshold in gradient percolation
NASA Astrophysics Data System (ADS)
Paterson, Lincoln
2015-02-01
A simple and fast way to apply correlations in percolation simulations is to apply a uniform gradient to the occupancy probabilities. For small networks, exact results are presented here for the spanning thresholds in site percolation with a gradient for networks up to 4 ×4 in two dimensions and 2 ×2 ×2 in three dimensions. Numerical results are provided for larger networks that extrapolate to a linear modification of the threshold proportional to the gradient for moderate values of the gradient.
Truncated Connectivities in a Highly Supercritical Anisotropic Percolation Model
NASA Astrophysics Data System (ADS)
Couto, Rodrigo G.; de Lima, Bernardo N. B.; Sanchis, Rémy
2013-12-01
We consider an anisotropic bond percolation model on , with p=( p h , p v )∈[0,1]2, p v > p h , and declare each horizontal (respectively vertical) edge of to be open with probability p h (respectively p v ), and otherwise closed, independently of all other edges. Let with 0< x 1< x 2, and . It is natural to ask how the two point connectivity function behaves, and whether anisotropy in percolation probabilities implies the strict inequality . In this note we give an affirmative answer in the highly supercritical regime.
Directed compact percolation near a damp wall with biased growth
NASA Astrophysics Data System (ADS)
Lonsdale, H.; Owczarek, A. L.
2012-11-01
The model of directed compact percolation near a damp wall is generalized to allow for a bias in the growth of a cluster, either towards or away from the wall. The percolation probability for clusters beginning with seed width m, any distance from the wall, is derived exactly by solving the associated recurrences. It is found that the general biased case near a damp wall leads to a critical exponent β = 1, in line with the dry biased case, which differs from the unbiased damp/dry exponent β = 2.
Remnant percolative disorder in highly-cured networks
Adolf, D.; Hance, B.; Martin, J.E. )
1993-05-24
The authors have previously reported viscoelastic measurements demonstrating that fully-cured networks and critical gels exhibit similar relaxation spectra, implying that fully-cured networks are somewhat ill- connected. Here, they present restricted valence percolation simulations of networks well beyond the percolation transition that explicitly display remnant disorder over length scales less than the correlation length of the network. They conclude that the topology of highly-cured networks is not well described by a regular three- dimensional tennis net but is ill-connected over length scales that correspond to relaxation modes of practical interest.
Flux pinning and percolation in high-Tc oxide superconductors
NASA Astrophysics Data System (ADS)
Matsushita, Teruo; Ni, Baorong; Yamafuji, Kaoru
Critical current characteristics in quench and melt growth (QMG) processed Y-Ba-Cu-O are investigated by ac inductive measurements. The critical current in these samples is percolative as is observed in sintered materials. However, this percolative behavior is not caused by weak-link grain boundaries but seems to be mainly attributed to layers of nonsuperconducting solidified melt. The experimental result of magnetization critical current density is compared with the theoretical estimate from the effective medium theory. It is also found that the shielding current with very high density flows locally inside the sample. Candidates for the dominant pinning centers in QMG processed samples are also discussed.
Accurate and Sensitive Peptide Identification with Mascot Percolator
Brosch, Markus; Yu, Lu; Hubbard, Tim; Choudhary, Jyoti
2009-01-01
Sound scoring methods for sequence database search algorithms such as Mascot and Sequest are essential for sensitive and accurate peptide and protein identifications from proteomic tandem mass spectrometry data. In this paper, we present a software package that interfaces Mascot with Percolator, a well performing machine learning method for rescoring database search results, and demonstrate it to be amenable for both low and high accuracy mass spectrometry data, outperforming all available Mascot scoring schemes as well as providing reliable significance measures. Mascot Percolator can be readily used as a stand alone tool or integrated into existing data analysis pipelines. PMID:19338334
Mirrorless lasing from light emitters in percolating clusters
NASA Astrophysics Data System (ADS)
Burlak, Gennadiy; Rubo, Y. G.
2015-07-01
We describe the lasing effect in the three-dimensional percolation system, where the percolating cluster is filled by active media composed by light emitters excited noncoherently. We show that, due to the presence of a topologically nontrivial photonic structure, the stimulated emission is modified with respect to both conventional and random lasers. The time dynamics and spectra of the lasing output are studied numerically with finite-difference time-domain approach. The Fermat principle and Monte Carlo approach are applied to characterize the optimal optical path and interconnection between the radiating emitters. The spatial structure of the laser mode is found by a long-time FDTD simulation.
Multifractality of self-avoiding walks on percolation clusters.
Blavatska, Viktoria; Janke, Wolfhard
2008-09-19
We consider self-avoiding walks on the backbone of percolation clusters in space dimensions d=2,3,4. Applying numerical simulations, we show that the whole multifractal spectrum of singularities emerges in exploring the peculiarities of the model. We obtain estimates for the set of critical exponents that govern scaling laws of higher moments of the distribution of percolation cluster sites visited by self-avoiding walks, in a good correspondence with an appropriately summed field-theoretical epsilon=6-d expansion [H.-K. Janssen and O. Stenull, Phys. Rev. E 75, 020801(R) (2007)10.1103/PhysRevE.75.020801]. PMID:18851389
Time Directed Avalanches in Invasion Models
Maslov, S. Department of Physics, SUNY at Stony Brook, Stony Brook, New York 11794 )
1995-01-23
We define forward and backward time-directed avalanches for a broad class of self-organized critical models including invasion percolation, interface depinning, and a simple model of evolution. Although the geometrical properties of the avalanches do not change under time reversal, their stationary state statistical distribution does. The overall distribution of forward avalanches [ital P]([ital s])[similar to][ital s][sup [minus]2] is superuniversal in this class of models. The power-law exponent [pi] for the distribution of distances between subsequent active sites is derived from the properties of backward avalanches.
A new inversion method for (T2, D) 2D NMR logging and fluid typing
NASA Astrophysics Data System (ADS)
Tan, Maojin; Zou, Youlong; Zhou, Cancan
2013-02-01
One-dimensional nuclear magnetic resonance (1D NMR) logging technology has some significant limitations in fluid typing. However, not only can two-dimensional nuclear magnetic resonance (2D NMR) provide some accurate porosity parameters, but it can also identify fluids more accurately than 1D NMR. In this paper, based on the relaxation mechanism of (T2, D) 2D NMR in a gradient magnetic field, a hybrid inversion method that combines least-squares-based QR decomposition (LSQR) and truncated singular value decomposition (TSVD) is examined in the 2D NMR inversion of various fluid models. The forward modeling and inversion tests are performed in detail with different acquisition parameters, such as magnetic field gradients (G) and echo spacing (TE) groups. The simulated results are discussed and described in detail, the influence of the above-mentioned observation parameters on the inversion accuracy is investigated and analyzed, and the observation parameters in multi-TE activation are optimized. Furthermore, the hybrid inversion can be applied to quantitatively determine the fluid saturation. To study the effects of noise level on the hybrid method and inversion results, the numerical simulation experiments are performed using different signal-to-noise-ratios (SNRs), and the effect of different SNRs on fluid typing using three fluid models are discussed and analyzed in detail.
NASA Astrophysics Data System (ADS)
Cheng, Chingyun; Kangara, Jayampathi; Arakelyan, Ilya; Thomas, John
2016-05-01
We tune the dimensionality of a strongly interacting degenerate 6 Li Fermi gas from 2D to quasi-2D, by adjusting the radial confinement of pancake-shaped clouds to control the radial chemical potential. In the 2D regime with weak radial confinement, the measured pair binding energies are in agreement with 2D-BCS mean field theory, which predicts dimer pairing energies in the many-body regime. In the qausi-2D regime obtained with increased radial confinement, the measured pairing energy deviates significantly from 2D-BCS theory. In contrast to the pairing energy, the measured radii of the cloud profiles are not fit by 2D-BCS theory in either the 2D or quasi-2D regimes, but are fit in both regimes by a beyond mean field polaron-model of the free energy. Supported by DOE, ARO, NSF, and AFOSR.
2D Radiative Processes Near Cloud Edges
NASA Technical Reports Server (NTRS)
Varnai, T.
2012-01-01
Because of the importance and complexity of dynamical, microphysical, and radiative processes taking place near cloud edges, the transition zone between clouds and cloud free air has been the subject of intense research both in the ASR program and in the wider community. One challenge in this research is that the one-dimensional (1D) radiative models widely used in both remote sensing and dynamical simulations become less accurate near cloud edges: The large horizontal gradients in particle concentrations imply that accurate radiative calculations need to consider multi-dimensional radiative interactions among areas that have widely different optical properties. This study examines the way the importance of multidimensional shortwave radiative interactions changes as we approach cloud edges. For this, the study relies on radiative simulations performed for a multiyear dataset of clouds observed over the NSA, SGP, and TWP sites. This dataset is based on Microbase cloud profiles as well as wind measurements and ARM cloud classification products. The study analyzes the way the difference between 1D and 2D simulation results increases near cloud edges. It considers both monochromatic radiances and broadband radiative heating, and it also examines the influence of factors such as cloud type and height, and solar elevation. The results provide insights into the workings of radiative processes and may help better interpret radiance measurements and better estimate the radiative impacts of this critical region.
Phase Engineering of 2D Tin Sulfides.
Mutlu, Zafer; Wu, Ryan J; Wickramaratne, Darshana; Shahrezaei, Sina; Liu, Chueh; Temiz, Selcuk; Patalano, Andrew; Ozkan, Mihrimah; Lake, Roger K; Mkhoyan, K A; Ozkan, Cengiz S
2016-06-01
Tin sulfides can exist in a variety of phases and polytypes due to the different oxidation states of Sn. A subset of these phases and polytypes take the form of layered 2D structures that give rise to a wide host of electronic and optical properties. Hence, achieving control over the phase, polytype, and thickness of tin sulfides is necessary to utilize this wide range of properties exhibited by the compound. This study reports on phase-selective growth of both hexagonal tin (IV) sulfide SnS2 and orthorhombic tin (II) sulfide SnS crystals with diameters of over tens of microns on SiO2 substrates through atmospheric pressure vapor-phase method in a conventional horizontal quartz tube furnace with SnO2 and S powders as the source materials. Detailed characterization of each phase of tin sulfide crystals is performed using various microscopy and spectroscopy methods, and the results are corroborated by ab initio density functional theory calculations. PMID:27099950
Ion Transport in 2-D Graphene Nanochannels
NASA Astrophysics Data System (ADS)
Xie, Quan; Foo, Elbert; Duan, Chuanhua
2015-11-01
Graphene membranes have recently attracted wide attention due to its great potential in water desalination and selective molecular sieving. Further developments of these membranes, including enhancing their mass transport rate and/or molecular selectivity, rely on the understanding of fundamental transport mechanisms through graphene membranes, which has not been studied experimentally before due to fabrication and measurement difficulties. Herein we report the fabrication of the basic constituent of graphene membranes, i.e. 2-D single graphene nanochannels (GNCs) and the study of ion transport in these channels. A modified bonding technique was developed to form GNCs with well-defined geometry and uniform channel height. Ion transport in such GNCs was studied using DC conductance measurement. Our preliminary results showed that the ion transport in GNCs is still governed by surface charge at low concentrations (10-6M to 10-4M). However, GNCs exhibits much higher ionic conductances than silica nanochannels with the same geometries in the surface-charge-governed regime. This conductance enhancement can be attributed to the pre-accumulation of charges on graphene surfaces. The work is supported by the Faculty Startup Fund (Boston University, USA).
Parallel map analysis on 2-D grids
Berry, M.; Comiskey, J.; Minser, K.
1993-12-31
In landscape ecology, computer modeling is used to assess habitat fragmentation and its ecological iMPLications. Specifically, maps (2-D grids) of habitat clusters must be analyzed to determine number, sizes and geometry of clusters. Models prior to this study relied upon sequential Fortran-77 programs which limited the sizes of maps and densities of clusters which could be analyzed. In this paper, we present more efficient computer models which can exploit recursion or parallelism. Significant improvements over the original Fortran-77 programs have been achieved using both recursive and nonrecursive C implementations on a variety of workstations such as the Sun Sparc 2, IBM RS/6000-350, and HP 9000-750. Parallel implementations on a 4096-processor MasPar MP-1 and a 32-processor CM-5 are also studied. Preliminary experiments suggest that speed improvements for the parallel model on the MasPar MP-1 (written in MPL) and on the CM-5 (written in C using CMMD) can be as much as 39 and 34 times faster, respectively, than the most efficient sequential C program on a Sun Sparc 2 for a 512 map. An important goal in this research effort is to produce a scalable map analysis algorithm for the identification and characterization of clusters for relatively large maps on massively-parallel computers.
2D Turbulence with Complicated Boundaries
NASA Astrophysics Data System (ADS)
Roullet, G.; McWilliams, J. C.
2014-12-01
We examine the consequences of lateral viscous boundary layers on the 2D turbulence that arises in domains with complicated boundaries (headlands, bays etc). The study is carried out numerically with LES. The numerics are carefully designed to ensure all global conservation laws, proper boundary conditions and a minimal range of dissipation scales. The turbulence dramatically differs from the classical bi-periodic case. Boundary layer separations lead to creation of many small vortices and act as a continuing energy source exciting the inverse cascade of energy throughout the domain. The detachments are very intermittent in time. In free decay, the final state depends on the effective numerical resolution: laminar with a single dominant vortex for low Re and turbulent with many vortices for large enough Re. After very long time, the turbulent end-state exhibits a striking tendency for the emergence of shielded vortices which then interact almost elastically. In the forced case, the boundary layers allow the turbulence to reach a statistical steady state without any artificial hypo-viscosity or other large-scale dissipation. Implications are discussed for the oceanic mesoscale and submesoscale turbulence.
2-D wavelet with position controlled resolution
NASA Astrophysics Data System (ADS)
Walczak, Andrzej; Puzio, Leszek
2005-09-01
Wavelet transformation localizes all irregularities in the scene. It is most effective in the case when intensities in the scene have no sharp details. It is the case often present in a medical imaging. To identify the shape one has to extract it from the scene as typical irregularity. When the scene does not contain sharp changes then common differential filters are not efficient tool for a shape extraction. The new 2-D wavelet for such task has been proposed. Described wavelet transform is axially symmetric and has varied scale in dependence on the distance from the centre of the wavelet symmetry. The analytical form of the wavelet has been presented as well as its application for details extraction in the scene. Most important feature of the wavelet transform is that it gives a multi-scale transformation, and if zoom is on the wavelet selectivity varies proportionally to the zoom step. As a result, the extracted shape does not change during zoom operation. What is more the wavelet selectivity can be fit to the local intensity gradient properly to obtain best extraction of the irregularities.
Tunable Percolation in Semiconducting Binary Polymer Nanoparticle Glasses.
Renna, Lawrence A; Bag, Monojit; Gehan, Timothy S; Han, Xu; Lahti, Paul M; Maroudas, Dimitrios; Venkataraman, D
2016-03-10
Binary polymer nanoparticle glasses provide opportunities to realize the facile assembly of disparate components, with control over nanoscale and mesoscale domains, for the development of functional materials. This work demonstrates that tunable electrical percolation can be achieved through semiconducting/insulating polymer nanoparticle glasses by varying the relative percentages of equal-sized nanoparticle constituents of the binary assembly. Using time-of-flight charge carrier mobility measurements and conducting atomic force microscopy, we show that these systems exhibit power law scaling percolation behavior with percolation thresholds of ∼24-30%. We develop a simple resistor network model, which can reproduce the experimental data, and can be used to predict percolation trends in binary polymer nanoparticle glasses. Finally, we analyze the cluster statistics of simulated binary nanoparticle glasses, and characterize them according to their predominant local motifs as (p(i), p(1-i))-connected networks that can be used as a supramolecular toolbox for rational material design based on polymer nanoparticles. PMID:26854924
Comment on the conductivity exponent in continuum percolation
NASA Astrophysics Data System (ADS)
Machta, J.
1988-05-01
The field theory introduced by Lubensky and Tremblay [Phys. Rev. B 34, 3408 (1986)] for continuum percolation is reanalyzed. Dynamical exponents are found which agree with those found by Straley [J. Phys. C 15, 2343 (1982)] and Machta et al. [Phys. Rev. B 33, 4818 (1986)] using a nodes-links-blobs approach.
A Simple Soil Percolation Test Device for Field Environmentalists
ERIC Educational Resources Information Center
Smith, William H.; Stark, Phillip E.
1977-01-01
A primary responsibility of field environmental health workers is evaluation of individual sewage disposal system sites. The authors of this article developed a practical, accurate, and inexpensive measurement device for obtaining reliable percolation test results. Directions for the construction and use of the device are detailed. Drawings…
The Use of Percolating Filters in Teaching Ecology.
ERIC Educational Resources Information Center
Gray, N. F.
1982-01-01
Using percolating filters (components of sewage treatment process) reduces problems of organization, avoids damage to habitats, and provides a local study site for field work or rapid collection of biological material throughout the year. Component organisms are easily identified and the habitat can be studied as a simple or complex system.…
Water-network percolation transitions in hydrated yeast
NASA Astrophysics Data System (ADS)
Sokołowska, Dagmara; Król-Otwinowska, Agnieszka; Mościcki, Józef K.
2004-11-01
We discovered two percolation processes in succession in dc conductivity of bulk baker’s yeast in the course of dehydration. Critical exponents characteristic for the three-dimensional network for heavily hydrated system, and two dimensions in the light hydration limit, evidenced a dramatic change of the water network dimensionality in the dehydration process.
The transport exponent in percolation models with additional loops
NASA Astrophysics Data System (ADS)
Babalievski, F.
1994-10-01
Several percolation models with additional loops were studied. The transport exponents for these models were estimated numerically by means of a transfer-matrix approach. It was found that the transport exponent has a drastically changed value for some of the models. This result supports some previous numerical studies on the vibrational properties of similar models (with additional loops).
The persistent percolation of single-stream voids
NASA Astrophysics Data System (ADS)
Falck, B.; Neyrinck, M. C.
2015-07-01
We study the nature of voids defined as single-stream regions that have not undergone shell-crossing. We use ORIGAMI to determine the cosmic web morphology of each dark matter particle in a suite of cosmological N-body simulations, which explicitly calculates whether a particle has crossed paths with others along multiple sets of axes and does not depend on a parameter or smoothing scale. The theoretical picture of voids is that of expanding underdensities with borders defined by shell-crossing. We find instead that locally underdense single-stream regions are not bounded on all sides by multi-stream regions, thus they percolate, filling the simulation volume; we show that the set of multi-stream particles also percolates. This percolation persists to high resolution, where the mass fraction of single-stream voids is low, because the volume fraction remains high; we speculate on the fraction of collapsed mass in the continuum limit of infinite resolution. By introducing a volume threshold parameter to define underdense void `cores', we create a catalogue of ORIGAMI voids which consist entirely of single-stream particles and measure their percolation properties, volume functions, and average densities.
Beyond the locally treelike approximation for percolation on real networks
NASA Astrophysics Data System (ADS)
Radicchi, Filippo; Castellano, Claudio
2016-03-01
Theoretical attempts proposed so far to describe ordinary percolation processes on real-world networks rely on the locally treelike ansatz. Such an approximation, however, holds only to a limited extent, because real graphs are often characterized by high frequencies of short loops. We present here a theoretical framework able to overcome such a limitation for the case of site percolation. Our method is based on a message passing algorithm that discounts redundant paths along triangles in the graph. We systematically test the approach on 98 real-world graphs and on synthetic networks. We find excellent accuracy in the prediction of the whole percolation diagram, with significant improvement with respect to the prediction obtained under the locally treelike approximation. Residual discrepancies between theory and simulations do not depend on clustering and can be attributed to the presence of loops longer than three edges. We present also a method to account for clustering in bond percolation, but the improvement with respect to the method based on the treelike approximation is much less apparent.
Percolation induced heat transfer in deep unsaturated zones
Lu, N.; LeCain, G.D.
2003-01-01
Subsurface temperature data from a borehole located in a desert wash were measured and used to delineate the conductive and advective heat transfer regimes, and to estimate the percolation quantity associated with the 1997-1998 El Ni??no precipitation. In an arid environment, conductive heat transfer dominates the variation of shallow subsurface temperature most of the time, except during sporadic precipitation periods. The subsurface time-varying temperature due to conductive heat transfer is highly correlated with the surface atmospheric temperature variation, whereas temperature variation due to advective heat transfer is strongly correlated with precipitation events. The advective heat transfer associated with precipitation and infiltration is the focus of this paper. Disruptions of the subsurface conductive temperature regime, associated with the 1997-1998 El Ni??no precipitation, were detected and used to quantify the percolation quantity. Modeling synthesis using a one-dimensional coupled heat and unsaturated flow model indicated that a percolation per unit area of 0.7 to 1.3 m height of water in two weeks during February 1998 was responsible for the observed temperature deviations down to a depth of 35.2 m. The reported study demonstrated quantitatively, for the first time, that the near surface temperature variation due to advective heat transfer can be significant at a depth greater than 10 m in unsaturated soils and can be used to infer the percolation amount in thick unsaturated soils.
NASA Astrophysics Data System (ADS)
Perrier, E. M. A.; Bird, N. R. A.; Rieutord, T. B.
2010-04-01
Quantifying the connectivity of pore networks is a key issue not only for modelling fluid flow and solute transport in porous media but also for assessing the ability of soil ecosystems to filter bacteria, viruses and any type of living microorganisms as well inert particles which pose a contamination risk. Straining is the main mechanical component of filtration processes: it is due to size effects, when a given soil retains a conveyed entity larger than the pores through which it is attempting to pass. We postulate that the range of sizes of entities which can be trapped inside soils has to be associated with the large range of scales involved in natural soil structures and that information on the pore size distribution has to be complemented by information on a Critical Filtration Size (CFS) delimiting the transition between percolating and non percolating regimes in multiscale pore networks. We show that the mass fractal dimensions which are classically used in soil science to quantify scaling laws in observed pore size distributions can also be used to build 3-D multiscale models of pore networks exhibiting such a critical transition. We extend to the 3-D case a new theoretical approach recently developed to address the connectivity of 2-D fractal networks (Bird and Perrier, 2009). Theoretical arguments based on renormalisation functions provide insight into multi-scale connectivity and a first estimation of CFS. Numerical experiments on 3-D prefractal media confirm the qualitative theory. These results open the way towards a new methodology to estimate soil filtration efficiency from the construction of soil structural models to be calibrated on available multiscale data.
NASA Astrophysics Data System (ADS)
Perrier, E. M. A.; Bird, N. R. A.; Rieutord, T. B.
2010-10-01
Quantifying the connectivity of pore networks is a key issue not only for modelling fluid flow and solute transport in porous media but also for assessing the ability of soil ecosystems to filter bacteria, viruses and any type of living microorganisms as well inert particles which pose a contamination risk. Straining is the main mechanical component of filtration processes: it is due to size effects, when a given soil retains a conveyed entity larger than the pores through which it is attempting to pass. We postulate that the range of sizes of entities which can be trapped inside soils has to be associated with the large range of scales involved in natural soil structures and that information on the pore size distribution has to be complemented by information on a critical filtration size (CFS) delimiting the transition between percolating and non percolating regimes in multiscale pore networks. We show that the mass fractal dimensions which are classically used in soil science to quantify scaling laws in observed pore size distributions can also be used to build 3-D multiscale models of pore networks exhibiting such a critical transition. We extend to the 3-D case a new theoretical approach recently developed to address the connectivity of 2-D fractal networks (Bird and Perrier, 2009). Theoretical arguments based on renormalisation functions provide insight into multi-scale connectivity and a first estimation of CFS. Numerical experiments on 3-D prefractal media confirm the qualitative theory. These results open the way towards a new methodology to estimate soil filtration efficiency from the construction of soil structural models to be calibrated on available multiscale data.
Water percolation in the upper lower mantle: A way to fill the Earth's mantle transition zone?
NASA Astrophysics Data System (ADS)
Richard, G. C.; Monnereau, M.; Ricard, Y.; Ingrin, J.
2003-04-01
Numerous studies have been devoted to the determination of water solubility in mantle material [1]. They all show strong solubility variations from one mineral phase to another. Principally, water partitioning has made the transition zone a probable trap for water from the Earth's mantle [2]. Nevertheless, previous numerical study [3] suggests the presence of 'free' water in the lower mantle. We have studied the behaviour of this 'free' phase and its importance in the water distribution just below the transition zone (660 km depth) in a 2D cartesian geometry. The model takes into account water partitioning between the mantle's transition zone and the upper-mantle of 10:1 and between the lower-mantle and the transition zone of 1:100 (i.e. respectively between olivine-spinel and spinel-postspinel). We have modelled two possible transport processes for the 'free' water: Diffusion and percolation. Our numerical experiments show that the presence of a ‘free phase’ modifies the water distribution in this area. Percolation process is more efficient to hydrate the transition zone than diffusion one, even in a very high diffusivity case. [1] J. Ingrin, H. Skogby, Hydrogen in nominally anhydrous upper mantle minerals: Concentration levels and implications, Eur. J. Mineral. 12 (2000) 543-570. [2] N. Bolfan-Casanova, H. Keppler, D. C. Rubie, Water partitioning between nominally anhydrous minerals in the MgO-SiO2-H2O system up to 24 GPa: implications for the distribution of water in Earth's mantle, Earth Planet. Sci. Lett. 182 (2000) 209-221. [3] G. C. M. Richard, M. Monnereau, J. Ingrin, Is the transition zone an empty water reservoir? Inferences from numerical model of mantle dynamics, Earth. Planet. Sci. Lett. 205 (2002) 37-51.
Network representation of pore scale imagery for percolation models
NASA Astrophysics Data System (ADS)
Klise, K. A.; McKenna, S. A.; Read, E.; Karpyn, Z. T.; Celauro, J.
2012-12-01
Multiphase flow under capillary dominated flow regimes is driven by an intricate relationship between pore geometry, material and fluid properties. In this research, high-resolution micro-computed tomography (CT) imaging experiments are used to investigate structural and surface properties of bead packs, and how they influence percolation pathways. Coreflood experiments use a mix of hydrophilic and hydrophobic beads to track the influence of variable contact angle on capillary flow. While high-resolution CT images can render micron scale representation of the pore space, data must be upscaled to capture pore and pore throat geometry for use in percolation models. In this analysis, the pore space is upscaled into a network representation based on properties of the medial axis. Finding the medial axis using micron scale images is computationally expensive. Here, we compare the efficiency and accuracy of medial axes using erosion-based and watershed algorithms. The resulting network representation is defined as a ball-and-stick model which represents pores and pore throats. The ball-and-stick model can be further reduced by eliminating sections of the network that fall below a capillary pressure threshold. In a system of mixed hydrophilic and hydrophobic beads, capillary pressure can change significantly throughout the network based on the interaction between surface and fluid properties. The upscaled network representations are used in percolation models to estimate transport pathway. Current results use a basic percolation model that sequentially fills neighboring pores with the highest potential. Future work will expand the percolation model to include additional mechanics, such as trapping, vacating pores, and viscous fingering. Results from the coreflood experiments will be used to validate upscaling techniques and percolation models. Preliminary results show that the relative strength of water-wet and oil-wet surfaces has a significant impact on percolation
2-D Animation's Not Just for Mickey Mouse.
ERIC Educational Resources Information Center
Weinman, Lynda
1995-01-01
Discusses characteristics of two-dimensional (2-D) animation; highlights include character animation, painting issues, and motion graphics. Sidebars present Silicon Graphics animations tools and 2-D animation programs for the desktop computer. (DGM)
Wu, J.; McLachlan, D.S.
1997-07-01
Compressed disks made from graphite and, its mechanical but not electrical isomorph, boron nitride as well as graphite-boron nitride powders, undergoing compression, are nearly ideal continuum percolation systems, as the ratio of their conductivities is nearly 10{sup {minus}18} and the scatter of the experimental points near the critical volume fraction {phi}{sub c} is very small. The following measurements, with the characteristic exponent(s) in brackets, are made on some or all of the samples in (axial) and at right angles (radial) to the direction of compression, as a function of the volume fraction of graphite ({phi}); dc conductivity (s and t), dielectric constant (s), magnetoresistivity (t{sub {perpendicular}}), and noise power (K). The noise power is also measured as function of resistance (w) and volume (b{sup {prime}}). The {phi}{sub c}{close_quote}s obtained for all measurements are consistent and explicable. The results for the exponents are less well understood but, where possible, these results are compared with theoretical predictions and previous experiments. The reasons for the nonuniversality of t are clarified. {copyright} {ital 1997} {ital The American Physical Society}
Conductive paint-filled cement paste sensor for accelerated percolation
NASA Astrophysics Data System (ADS)
Laflamme, Simon; Pinto, Irvin; Saleem, Hussam S.; Elkashef, Mohamed; Wang, Kejin; Cochran, Eric
2015-04-01
Cementitious-based strain sensors can be used as robust monitoring systems for civil engineering applications, such as road pavements and historic structures. To enable large-scale deployments, the fillers used in creating a conductive material must be inexpensive and easy to mix homogeneously. Carbon black (CB) particles constitute a promising filler due to their low cost and ease of dispersion. However, a relatively high quantity of these particles needs to be mixed with cement in order to reach the percolation threshold. Such level may influence the physical properties of the cementitious material itself, such as compressive and tensile strengths. In this paper, we investigate the possibility of utilizing a polymer to create conductive chains of CB more quickly than in a cementitious-only medium. This way, while the resulting material would have a higher conductivity, the percolation threshold would be reached with fewer CB particles. Building on the principle that the percolation threshold provides great sensing sensitivity, it would be possible to fabricate sensors using less conducting particles. We present results from a preliminary investigation comparing the utilization of a conductive paint fabricated from a poly-Styrene-co-Ethylene-co-Butylene-co-Styrene (SEBS) polymer matrix and CB, and CB-only as fillers to create cementitious sensors. Preliminary results show that the percolation threshold can be attained with significantly less CB using the SEBS+CB mix. Also, the study of the strain sensing properties indicates that the SEBS+CB sensor has a strain sensitivity comparable to the one of a CB-only cementitious sensor when comparing specimens fabricated at their respective percolation thresholds.
MAZE96. Generates 2D Input for DYNA NIKE & TOPAZ
Sanford, L.; Hallquist, J.O.
1992-02-24
MAZE is an interactive program that serves as an input and two-dimensional mesh generator for DYNA2D, NIKE2D, TOPAZ2D, and CHEMICAL TOPAZ2D. MAZE also generates a basic template for ISLAND input. MAZE has been applied to the generation of input data to study the response of two-dimensional solids and structures undergoing finite deformations under a wide variety of large deformation transient dynamic and static problems and heat transfer analyses.
On 2D graphical representation of DNA sequence of nondegeneracy
NASA Astrophysics Data System (ADS)
Zhang, Yusen; Liao, Bo; Ding, Kequan
2005-08-01
Some two-dimensional (2D) graphical representations of DNA sequences have been given by Gates, Nandy, Leong and Mogenthaler, Randić, and Liao et al., which give visual characterizations of DNA sequences. In this Letter, we introduce a nondegeneracy 2D graphical representation of DNA sequence, which is different from Randić's novel 2D representation and Liao's 2D representation. We also present the nondegeneracy forms corresponding to the representations of Gates, Nandy, Leong and Mogenthaler.
Generates 2D Input for DYNA NIKE & TOPAZ
1996-07-15
MAZE is an interactive program that serves as an input and two-dimensional mesh generator for DYNA2D, NIKE2D, TOPAZ2D, and CHEMICAL TOPAZ2D. MAZE also generates a basic template for ISLAND input. MAZE has been applied to the generation of input data to study the response of two-dimensional solids and structures undergoing finite deformations under a wide variety of large deformation transient dynamic and static problems and heat transfer analyses.
Moutou, F; Pastoret, P P
2010-08-01
Every region of the world is concerned by potential mammal invasions, as humans are already present on all the world's land masses. All these invasions are a result of species introductions by humans for one reason or another. The authors briefly review the known movements and observed consequences of mammal-related invasions. They take examples from all five continents, as well as from a few island systems. The ancient introduction of game species, and later of domestic species, has been followed more recently by movements of commercial species. We are now seeing the emergence of what are known as entertainment species. In a number of cases, such introductions have led to the establishment of new epidemiological cycles that previously might never have been thought possible. According to current indicators, this phenomenon is not on the wane. PMID:20919577
2d PDE Linear Symmetric Matrix Solver
1983-10-01
ICCG2 (Incomplete Cholesky factorized Conjugate Gradient algorithm for 2d symmetric problems) was developed to solve a linear symmetric matrix system arising from a 9-point discretization of two-dimensional elliptic and parabolic partial differential equations found in plasma physics applications, such as resistive MHD, spatial diffusive transport, and phase space transport (Fokker-Planck equation) problems. These problems share the common feature of being stiff and requiring implicit solution techniques. When these parabolic or elliptic PDE''s are discretized withmore » finite-difference or finite-element methods,the resulting matrix system is frequently of block-tridiagonal form. To use ICCG2, the discretization of the two-dimensional partial differential equation and its boundary conditions must result in a block-tridiagonal supermatrix composed of elementary tridiagonal matrices. The incomplete Cholesky conjugate gradient algorithm is used to solve the linear symmetric matrix equation. Loops are arranged to vectorize on the Cray1 with the CFT compiler, wherever possible. Recursive loops, which cannot be vectorized, are written for optimum scalar speed. For matrices lacking symmetry, ILUCG2 should be used. Similar methods in three dimensions are available in ICCG3 and ILUCG3. A general source containing extensions and macros, which must be processed by a pre-compiler to obtain the standard FORTRAN source, is provided along with the standard FORTRAN source because it is believed to be more readable. The pre-compiler is not included, but pre-compilation may be performed by a text editor as described in the UCRL-88746 Preprint.« less
2d PDE Linear Asymmetric Matrix Solver
1983-10-01
ILUCG2 (Incomplete LU factorized Conjugate Gradient algorithm for 2d problems) was developed to solve a linear asymmetric matrix system arising from a 9-point discretization of two-dimensional elliptic and parabolic partial differential equations found in plasma physics applications, such as plasma diffusion, equilibria, and phase space transport (Fokker-Planck equation) problems. These equations share the common feature of being stiff and requiring implicit solution techniques. When these parabolic or elliptic PDE''s are discretized with finite-difference or finite-elementmore » methods, the resulting matrix system is frequently of block-tridiagonal form. To use ILUCG2, the discretization of the two-dimensional partial differential equation and its boundary conditions must result in a block-tridiagonal supermatrix composed of elementary tridiagonal matrices. A generalization of the incomplete Cholesky conjugate gradient algorithm is used to solve the matrix equation. Loops are arranged to vectorize on the Cray1 with the CFT compiler, wherever possible. Recursive loops, which cannot be vectorized, are written for optimum scalar speed. For problems having a symmetric matrix ICCG2 should be used since it runs up to four times faster and uses approximately 30% less storage. Similar methods in three dimensions are available in ICCG3 and ILUCG3. A general source, containing extensions and macros, which must be processed by a pre-compiler to obtain the standard FORTRAN source, is provided along with the standard FORTRAN source because it is believed to be more readable. The pre-compiler is not included, but pre-compilation may be performed by a text editor as described in the UCRL-88746 Preprint.« less
Ultrasonic 2D matrix PVDF transducer
NASA Astrophysics Data System (ADS)
Ptchelintsev, A.; Maev, R. Gr.
2000-05-01
During the past decade a substantial amount of work has been done in the area of ultrasonic imaging technology using 2D arrays. The main problems arising for the two-dimensional matrix transducers at megahertz frequencies are small size and huge count of the elements, high electrical impedance, low sensitivity, bad SNR and slower data acquisition rate. The major technological difficulty remains the high density of the interconnect. To solve these problems numerous approaches have been suggested. In the present work, a 24×24 elements (24 transmit+24 receive) matrix and a switching board were developed. The transducer consists of two 52 μm PVDF layers each representing a linear array of 24 elements placed one on the top of the other. Electrodes in these two layers are perpendicular and form the grid of 0.5×0.5 mm pitch. The layers are bonded together with the ground electrode being monolithic and located between the layers. The matrix is backed from the rear surface with an epoxy composition. During the emission, a linear element from the emitting layer generates a longitudinal wave pulse propagating inside the test object. Reflected pulses are picked-up by the receiving layer. During one transmit-receive cycle one transmit element and one receive element are selected by corresponding multiplexers. These crossed elements emulate a small element formed by their intersection. The present design presents the following advantages: minimizes number of active channels and density of the interconnect; reduces the electrical impedance of the element improving electrical matching; enables the transmit-receive mode; due to the efficient backing provides bandwidth and good time resolution; and, significantly reduces the electronics complexity. The matrix can not be used for the beam steering and focusing. Owing to this impossibility of focusing, the penetration depth is limited as well by the diffraction phenomena.
A Planar Quantum Transistor Based on 2D-2D Tunneling in Double Quantum Well Heterostructures
Baca, W.E.; Blount, M.A.; Hafich, M.J.; Lyo, S.K.; Moon, J.S.; Reno, J.L.; Simmons, J.A.; Wendt, J.R.
1998-12-14
We report on our work on the double electron layer tunneling transistor (DELTT), based on the gate-control of two-dimensional -- two-dimensional (2D-2D) tunneling in a double quantum well heterostructure. While previous quantum transistors have typically required tiny laterally-defined features, by contrast the DELTT is entirely planar and can be reliably fabricated in large numbers. We use a novel epoxy-bond-and-stop-etch (EBASE) flip-chip process, whereby submicron gating on opposite sides of semiconductor epitaxial layers as thin as 0.24 microns can be achieved. Because both electron layers in the DELTT are 2D, the resonant tunneling features are unusually sharp, and can be easily modulated with one or more surface gates. We demonstrate DELTTs with peak-to-valley ratios in the source-drain I-V curve of order 20:1 below 1 K. Both the height and position of the resonant current peak can be controlled by gate voltage over a wide range. DELTTs with larger subband energy offsets ({approximately} 21 meV) exhibit characteristics that are nearly as good at 77 K, in good agreement with our theoretical calculations. Using these devices, we also demonstrate bistable memories operating at 77 K. Finally, we briefly discuss the prospects for room temperature operation, increases in gain, and high-speed.
Correlated Electron Phenomena in 2D Materials
NASA Astrophysics Data System (ADS)
Lambert, Joseph G.
In this thesis, I present experimental results on coherent electron phenomena in layered two-dimensional materials: single layer graphene and van der Waals coupled 2D TiSe2. Graphene is a two-dimensional single-atom thick sheet of carbon atoms first derived from bulk graphite by the mechanical exfoliation technique in 2004. Low-energy charge carriers in graphene behave like massless Dirac fermions, and their density can be easily tuned between electron-rich and hole-rich quasiparticles with electrostatic gating techniques. The sharp interfaces between regions of different carrier densities form barriers with selective transmission, making them behave as partially reflecting mirrors. When two of these interfaces are set at a separation distance within the phase coherence length of the carriers, they form an electronic version of a Fabry-Perot cavity. I present measurements and analysis of multiple Fabry-Perot modes in graphene with parallel electrodes spaced a few hundred nanometers apart. Transition metal dichalcogenide (TMD) TiSe2 is part of the family of materials that coined the term "materials beyond graphene". It contains van der Waals coupled trilayer stacks of Se-Ti-Se. Many TMD materials exhibit a host of interesting correlated electronic phases. In particular, TiSe2 exhibits chiral charge density waves (CDW) below TCDW ˜ 200 K. Upon doping with copper, the CDW state gets suppressed with Cu concentration, and CuxTiSe2 becomes superconducting with critical temperature of T c = 4.15 K. There is still much debate over the mechanisms governing the coexistence of the two correlated electronic phases---CDW and superconductivity. I will present some of the first conductance spectroscopy measurements of proximity coupled superconductor-CDW systems. Measurements reveal a proximity-induced critical current at the Nb-TiSe2 interfaces, suggesting pair correlations in the pure TiSe2. The results indicate that superconducting order is present concurrently with CDW in
NASA Astrophysics Data System (ADS)
Shehzad, Khurram; Ahmad, Mirza Nadeem; Hussain, Tajamal; Mumtaz, Muhammad; Shah, Asma Tufail; Mujahid, Adnan; Wang, Chao; Ellingsen, Josef; Dang, Zhi-Min
2014-08-01
The effect of carbon nanotube aspect ratio (AR) on the percolation characteristics of their polymer composites was investigated by melt blending the multi-wall carbon nanotubes (MWCNTs) with different AR with a thermoplastic elastomer. Previously, most studies reported the effect of aspect ratio of MWCNTs only in the context of achieving the maximum electrical conductivity at lower percolation thresholds in the polymer composites. In this study, our results indicate that aspect ratio can also influence other percolation properties such as the pre-percolation conductivity, percolation conductivity and post-percolation conductivity, shape of the percolation curve, and the width of the insulator-conductor transition. We have established that AR can be used to tailor the percolation curves from sharp to quasi-linear ones, which can help us fabricate the percolative composites with stable electrical properties. Experimental results suggested that the mathematically calculated nominal AR of the MWCNTs was an unclear parameter to correlate with the percolation characteristics of the composites. Instead, an approach taking into consideration the nominal length (l) and the diameter (d) of the MWCNTs individually rather than as a combined AR (l/d) parameter gave a better explanation of the relation between MWCNT dimensions and percolation characteristics.
How Inhomogeneous Site Percolation Works on Bethe Lattices: Theory and Application
NASA Astrophysics Data System (ADS)
Ren, Jingli; Zhang, Liying; Siegmund, Stefan
2016-03-01
Inhomogeneous percolation, for its closer relationship with real-life, can be more useful and reasonable than homogeneous percolation to illustrate the critical phenomena and dynamical behaviour of complex networks. However, due to its intricacy, the theoretical framework of inhomogeneous percolation is far from being complete and many challenging problems are still open. In this paper, we first investigate inhomogeneous site percolation on Bethe Lattices with two occupation probabilities, and then extend the result to percolation with m occupation probabilities. The critical behaviour of this inhomogeneous percolation is shown clearly by formulating the percolation probability with given occupation probability p, the critical occupation probability , and the average cluster size where p is subject to . Moreover, using the above theory, we discuss in detail the diffusion behaviour of an infectious disease (SARS) and present specific disease-control strategies in consideration of groups with different infection probabilities.
How Inhomogeneous Site Percolation Works on Bethe Lattices: Theory and Application
Ren, Jingli; Zhang, Liying; Siegmund, Stefan
2016-01-01
Inhomogeneous percolation, for its closer relationship with real-life, can be more useful and reasonable than homogeneous percolation to illustrate the critical phenomena and dynamical behaviour of complex networks. However, due to its intricacy, the theoretical framework of inhomogeneous percolation is far from being complete and many challenging problems are still open. In this paper, we first investigate inhomogeneous site percolation on Bethe Lattices with two occupation probabilities, and then extend the result to percolation with m occupation probabilities. The critical behaviour of this inhomogeneous percolation is shown clearly by formulating the percolation probability with given occupation probability p, the critical occupation probability , and the average cluster size where p is subject to . Moreover, using the above theory, we discuss in detail the diffusion behaviour of an infectious disease (SARS) and present specific disease-control strategies in consideration of groups with different infection probabilities. PMID:26926785
CYP2D7 Sequence Variation Interferes with TaqMan CYP2D6*15 and *35 Genotyping
Riffel, Amanda K.; Dehghani, Mehdi; Hartshorne, Toinette; Floyd, Kristen C.; Leeder, J. Steven; Rosenblatt, Kevin P.; Gaedigk, Andrea
2016-01-01
TaqMan™ genotyping assays are widely used to genotype CYP2D6, which encodes a major drug metabolizing enzyme. Assay design for CYP2D6 can be challenging owing to the presence of two pseudogenes, CYP2D7 and CYP2D8, structural and copy number variation and numerous single nucleotide polymorphisms (SNPs) some of which reflect the wild-type sequence of the CYP2D7 pseudogene. The aim of this study was to identify the mechanism causing false-positive CYP2D6*15 calls and remediate those by redesigning and validating alternative TaqMan genotype assays. Among 13,866 DNA samples genotyped by the CompanionDx® lab on the OpenArray platform, 70 samples were identified as heterozygotes for 137Tins, the key SNP of CYP2D6*15. However, only 15 samples were confirmed when tested with the Luminex xTAG CYP2D6 Kit and sequencing of CYP2D6-specific long range (XL)-PCR products. Genotype and gene resequencing of CYP2D6 and CYP2D7-specific XL-PCR products revealed a CC>GT dinucleotide SNP in exon 1 of CYP2D7 that reverts the sequence to CYP2D6 and allows a TaqMan assay PCR primer to bind. Because CYP2D7 also carries a Tins, a false-positive mutation signal is generated. This CYP2D7 SNP was also responsible for generating false-positive signals for rs769258 (CYP2D6*35) which is also located in exon 1. Although alternative CYP2D6*15 and *35 assays resolved the issue, we discovered a novel CYP2D6*15 subvariant in one sample that carries additional SNPs preventing detection with the alternate assay. The frequency of CYP2D6*15 was 0.1% in this ethnically diverse U.S. population sample. In addition, we also discovered linkage between the CYP2D7 CC>GT dinucleotide SNP and the 77G>A (rs28371696) SNP of CYP2D6*43. The frequency of this tentatively functional allele was 0.2%. Taken together, these findings emphasize that regardless of how careful genotyping assays are designed and evaluated before being commercially marketed, rare or unknown SNPs underneath primer and/or probe regions can impact
CYP2D7 Sequence Variation Interferes with TaqMan CYP2D6 (*) 15 and (*) 35 Genotyping.
Riffel, Amanda K; Dehghani, Mehdi; Hartshorne, Toinette; Floyd, Kristen C; Leeder, J Steven; Rosenblatt, Kevin P; Gaedigk, Andrea
2015-01-01
TaqMan™ genotyping assays are widely used to genotype CYP2D6, which encodes a major drug metabolizing enzyme. Assay design for CYP2D6 can be challenging owing to the presence of two pseudogenes, CYP2D7 and CYP2D8, structural and copy number variation and numerous single nucleotide polymorphisms (SNPs) some of which reflect the wild-type sequence of the CYP2D7 pseudogene. The aim of this study was to identify the mechanism causing false-positive CYP2D6 (*) 15 calls and remediate those by redesigning and validating alternative TaqMan genotype assays. Among 13,866 DNA samples genotyped by the CompanionDx® lab on the OpenArray platform, 70 samples were identified as heterozygotes for 137Tins, the key SNP of CYP2D6 (*) 15. However, only 15 samples were confirmed when tested with the Luminex xTAG CYP2D6 Kit and sequencing of CYP2D6-specific long range (XL)-PCR products. Genotype and gene resequencing of CYP2D6 and CYP2D7-specific XL-PCR products revealed a CC>GT dinucleotide SNP in exon 1 of CYP2D7 that reverts the sequence to CYP2D6 and allows a TaqMan assay PCR primer to bind. Because CYP2D7 also carries a Tins, a false-positive mutation signal is generated. This CYP2D7 SNP was also responsible for generating false-positive signals for rs769258 (CYP2D6 (*) 35) which is also located in exon 1. Although alternative CYP2D6 (*) 15 and (*) 35 assays resolved the issue, we discovered a novel CYP2D6 (*) 15 subvariant in one sample that carries additional SNPs preventing detection with the alternate assay. The frequency of CYP2D6 (*) 15 was 0.1% in this ethnically diverse U.S. population sample. In addition, we also discovered linkage between the CYP2D7 CC>GT dinucleotide SNP and the 77G>A (rs28371696) SNP of CYP2D6 (*) 43. The frequency of this tentatively functional allele was 0.2%. Taken together, these findings emphasize that regardless of how careful genotyping assays are designed and evaluated before being commercially marketed, rare or unknown SNPs underneath primer
Percolation effects on entangled polymer rheology and the glass transition
NASA Astrophysics Data System (ADS)
Wool, Richard P.
2012-07-01
Current thinking on the fundamentals of entangled polymer melt rheology suggests that stress relaxation in the terminal zone occurs via Reptation, chain-end fluctuation and (convective) constraint release. This scenario is not correct. It is shown through a series of experiments with selectively deuterated model polymers that relaxation occurs through a percolation process which permits large clusters of entangled polymers to stress relax before their conformations are fully relaxed. The percolation model of entanglements (R.P. Wool, Macromolecules 26, 1564, 1993) makes unique predictions regarding the dynamics of polymer chains in the terminal relaxation zone. These include: (a) Reptating homopolymer chains with molecular weight M >> Mc appear to be non-Reptating as their ends and centers relax at the same rate in a Rouse-like manner during percolation. (b) The mechanical relaxation time τ(M) is related to the Reptation time Tr˜ M3 by τ(M) = Tr[(1-Mc/M)Me/Mc]2, which is the origin of the zero shear viscosity behaving as ηo˜M3.4 (c) The biggest surprise is that during stress relaxation, the random coil dimensions Rg(//) and Rg(⊥) are not fully relaxed when the stress and birefringence relax to zero. (d) Matrix molecular weight P effects on relaxation time τ(M) of the probe chain M are as follows: When the probe chain M>>P, the matrix P-chains percolate and Rouse-like dynamics is observed for the M-Reptating chains with τ(M) ˜ P1M2. (e) When the matrix P>>M, percolation does not occur for the M-chain and the relaxation time of the probe chain τ(M) ˜ PoM3 is in accord with DeGennes Reptation theory. These unusual results predicted by entanglement percolation are supported by extensive experimental data (NR, SANS, DSIMS, FTIR, BR) from selectively deuterated polystyrene chains HDH, DHD, HPS and DPS. These results clearly suggest that current notions of polymer rheology need to be reconsidered. Near Tg, a new perspective on the Glass Transition of amorphous
Evaluation of a [13C]-Dextromethorphan Breath Test to Assess CYP2D6 Phenotype
Leeder, J. Steven; Pearce, Robin E.; Gaedigk, Andrea; Modak, Anil; Rosen, David I.
2016-01-01
A [13C]-dextromethorphan ([13C]-DM) breath test was evaluated to assess its feasibility as a rapid, phenotyping assay for CYP2D6 activity. [13C]-DM (0.5 mg/kg) was administered orally with water or potassium bicarbonate-sodium bicarbonate to 30 adult Caucasian volunteers (n = 1 each): CYP2D6 poor metabolizers (2 null alleles; PM-0) and extensive metabolizers with 1 (EM-1) or 2 functional alleles (EM-2). CYP2D6 phenotype was determined by 13CO2 enrichment measured by infrared spectrometry (delta-over-baseline [DOB] value) in expired breath samples collected before and up to 240 minutes after [13C]-DM ingestion and by 4-hour urinary metabolite ratio. The PM-0 group was readily distinguishable from either EM group by both the breath test and urinary metabolite ratio. Using a single point determination of phenotype at 40 minutes and defining PMs as subjects with a DOB ≤ 0.5, the sensitivity of the method was 100%; specificity was 95% with 95% accuracy and resulted in the misclassification of 1 EM-1 individual as a PM. Modification of the initial protocol (timing of potassium bicarbonate-sodium bicarbonate administration relative to dose) yielded comparable results, but there was a tendency toward increased DOB values. Although further development is required, these studies suggest that the [13C]-DM breath test offers promise as a rapid, minimally invasive phenotyping assay for CYP2D6 activity. PMID:18728242
Preliminary work of real-time ultrasound imaging system for 2-D array transducer.
Li, Xu; Yang, Jiali; Ding, Mingyue; Yuchi, Ming
2015-01-01
Ultrasound (US) has emerged as a non-invasive imaging modality that can provide anatomical structure information in real time. To enable the experimental analysis of new 2-D array ultrasound beamforming methods, a pre-beamformed parallel raw data acquisition system was developed for 3-D data capture of 2D array transducer. The transducer interconnection adopted the row-column addressing (RCA) scheme, where the columns and rows were active in sequential for transmit and receive events, respectively. The DAQ system captured the raw data in parallel and the digitized data were fed through the field programmable gate array (FPGA) to implement the pre-beamforming. Finally, 3-D images were reconstructed through the devised platform in real-time. PMID:26405923
Methodological Gaps in Left Atrial Function Assessment by 2D Speckle Tracking Echocardiography
Rimbaş, Roxana Cristina; Dulgheru, Raluca Elena; Vinereanu, Dragoş
2015-01-01
The assessment of left atrial (LA) function is used in various cardiovascular diseases. LA plays a complementary role in cardiac performance by modulating left ventricular (LV) function. Transthoracic two-dimensional (2D) phasic volumes and Doppler echocardiography can measure LA function non-invasively. However, evaluation of LA deformation derived from 2D speckle tracking echocardiography (STE) is a new feasible and promising approach for assessment of LA mechanics. These parameters are able to detect subclinical LA dysfunction in different pathological condition. Normal ranges for LA deformation and cut-off values to diagnose LA dysfunction with different diseases have been reported, but data are still conflicting, probably because of some methodological and technical issues. This review highlights the importance of an unique standardized technique to assess the LA phasic functions by STE, and discusses recent studies on the most important clinical applications of this technique. PMID:26761370
Price of anarchy is maximized at the percolation threshold.
Skinner, Brian
2015-05-01
When many independent users try to route traffic through a network, the flow can easily become suboptimal as a consequence of congestion of the most efficient paths. The degree of this suboptimality is quantified by the so-called price of anarchy (POA), but so far there are no general rules for when to expect a large POA in a random network. Here I address this question by introducing a simple model of flow through a network with randomly placed congestible and incongestible links. I show that the POA is maximized precisely when the fraction of congestible links matches the percolation threshold of the lattice. Both the POA and the total cost demonstrate critical scaling near the percolation threshold. PMID:26066138
The price of anarchy is maximized at the percolation threshold
NASA Astrophysics Data System (ADS)
Skinner, Brian
2015-03-01
When many independent users try to route traffic through a network, the flow can easily become suboptimal as a consequence of congestion of the most efficient paths. The degree of this suboptimality is quantified by the so-called ``price of anarchy'' (POA), but so far there are no general rules for when to expect a large POA in a random network. Here I address this question by introducing a simple model of flow through a network with randomly-placed ``congestible'' and ``incongestible'' links. I show that the POA is maximized precisely when the fraction of congestible links matches the percolation threshold of the lattice. Both the POA and the total cost demonstrate critical scaling near the percolation threshold.
Price of anarchy is maximized at the percolation threshold
NASA Astrophysics Data System (ADS)
Skinner, Brian
2015-05-01
When many independent users try to route traffic through a network, the flow can easily become suboptimal as a consequence of congestion of the most efficient paths. The degree of this suboptimality is quantified by the so-called price of anarchy (POA), but so far there are no general rules for when to expect a large POA in a random network. Here I address this question by introducing a simple model of flow through a network with randomly placed congestible and incongestible links. I show that the POA is maximized precisely when the fraction of congestible links matches the percolation threshold of the lattice. Both the POA and the total cost demonstrate critical scaling near the percolation threshold.
Colloidal suspensions of C-particles: Entanglement, percolation and microrheology
NASA Astrophysics Data System (ADS)
Hoell, Christian; Löwen, Hartmut
2016-05-01
We explore structural and dynamical behavior of concentrated colloidal suspensions made up by C-shape particles using Brownian dynamics computer simulations and theory. In particular, we focus on the entanglement process between nearby particles for almost closed C-shapes with a small opening angle. Depending on the opening angle and the particle concentration, there is a percolation transition for the cluster of entangled particles which shows the classical scaling characteristics. In a broad density range below the percolation threshold, we find a stretched exponential function for the dynamical decorrelation of the entanglement process. Finally, we study a setup typical in microrheology by dragging a single tagged particle with constant speed through the suspension. We measure the cluster connected to and dragged with this tagged particle. In agreement with a phenomenological theory, the size of the dragged cluster depends on the dragging direction and increases markedly with the dragging speed.
Stochastic Loewner evolution relates anomalous diffusion and anisotropic percolation
NASA Astrophysics Data System (ADS)
Credidio, Heitor F.; Moreira, André A.; Herrmann, Hans J.; Andrade, José S.
2016-04-01
We disclose the origin of anisotropic percolation perimeters in terms of the stochastic Loewner evolution (SLE) process. Precisely, our results from extensive numerical simulations indicate that the perimeters of multilayered and directed percolation clusters at criticality are the scaling limits of the Loewner evolution of an anomalous Brownian motion, being superdiffusive and subdiffusive, respectively. The connection between anomalous diffusion and fractal anisotropy is further tested by using long-range power-law correlated time series (fractional Brownian motion) as the driving functions in the evolution process. The fact that the resulting traces are distinctively anisotropic corroborates our hypothesis. Under the conceptual framework of SLE, our study therefore reveals different perspectives for mathematical and physical interpretations of non-Markovian processes in terms of anisotropic paths at criticality and vice versa.
Finite-size effects and percolation properties of Poisson geometries.
Larmier, C; Dumonteil, E; Malvagi, F; Mazzolo, A; Zoia, A
2016-07-01
Random tessellations of the space represent a class of prototype models of heterogeneous media, which are central in several applications in physics, engineering, and life sciences. In this work, we investigate the statistical properties of d-dimensional isotropic Poisson geometries by resorting to Monte Carlo simulation, with special emphasis on the case d=3. We first analyze the behavior of the key features of these stochastic geometries as a function of the dimension d and the linear size L of the domain. Then, we consider the case of Poisson binary mixtures, where the polyhedra are assigned two labels with complementary probabilities. For this latter class of random geometries, we numerically characterize the percolation threshold, the strength of the percolating cluster, and the average cluster size. PMID:27575099
Percolation mechanism drives actin gels to the critically connected state
NASA Astrophysics Data System (ADS)
Lee, Chiu Fan; Pruessner, Gunnar
2016-05-01
Cell motility and tissue morphogenesis depend crucially on the dynamic remodeling of actomyosin networks. An actomyosin network consists of an actin polymer network connected by cross-linker proteins and motor protein myosins that generate internal stresses on the network. A recent discovery shows that for a range of experimental parameters, actomyosin networks contract to clusters with a power-law size distribution [J. Alvarado, Nat. Phys. 9, 591 (2013), 10.1038/nphys2715]. Here, we argue that actomyosin networks can exhibit a robust critical signature without fine-tuning because the dynamics of the system can be mapped onto a modified version of percolation with trapping (PT), which is known to show critical behavior belonging to the static percolation universality class without the need for fine-tuning of a control parameter. We further employ our PT model to generate experimentally testable predictions.
Fractal structure of equipotential curves on a continuum percolation model
NASA Astrophysics Data System (ADS)
Matsutani, Shigeki; Shimosako, Yoshiyuki; Wang, Yunhong
2012-12-01
We numerically investigate the electric potential distribution over a two-dimensional continuum percolation model between the electrodes. The model consists of overlapped conductive particles on the background with an infinitesimal conductivity. Using the finite difference method, we solve the generalized Laplace equation and show that in the potential distribution, there appear quasi-equipotential clusters which approximately and locally have the same values as steps and stairs. Since the quasi-equipotential clusters have the fractal structure, we compute the fractal dimension of equipotential curves and its dependence on the volume fraction over [0,1]. The fractal dimension in [1.00, 1.246] has a peak at the percolation threshold pc.
The September 11 attack: A percolation of individual passive support
NASA Astrophysics Data System (ADS)
Galam, S.
2002-04-01
A model to terrorism is presented using the theory of percolation. Terrorism power is related to the spontaneous formation of random backbones of people who are sympathetic to terrorism but without being directly involved in it. They just don't oppose in case they could. In the past such friendly-to-terrorism backbones have been always existing but were of finite size and localized to a given geographical area. The September 11 terrorist attack on the US has revealed for the first time the existence of a world wide spread extension. It is argued to have result from a sudden world percolation of otherwise unconnected and dormant world spread backbones of passive supporters. The associated strategic question is then to determine if collecting ground information could have predict and thus avoid such a transition. Our results show the answer is no, voiding the major criticism against intelligence services. To conclude the impact of military action is discussed.
Concurrent enhancement of percolation and synchronization in adaptive networks
NASA Astrophysics Data System (ADS)
Eom, Young-Ho; Boccaletti, Stefano; Caldarelli, Guido
2016-06-01
Co-evolutionary adaptive mechanisms are not only ubiquitous in nature, but also beneficial for the functioning of a variety of systems. We here consider an adaptive network of oscillators with a stochastic, fitness-based, rule of connectivity, and show that it self-organizes from fragmented and incoherent states to connected and synchronized ones. The synchronization and percolation are associated to abrupt transitions, and they are concurrently (and significantly) enhanced as compared to the non-adaptive case. Finally we provide evidence that only partial adaptation is sufficient to determine these enhancements. Our study, therefore, indicates that inclusion of simple adaptive mechanisms can efficiently describe some emergent features of networked systems’ collective behaviors, and suggests also self-organized ways to control synchronization and percolation in natural and social systems.
Effect of threshold disorder on the quorum percolation model.
Monceau, Pascal; Renault, Renaud; Métens, Stéphane; Bottani, Samuel
2016-07-01
We study the modifications induced in the behavior of the quorum percolation model on neural networks with Gaussian in-degree by taking into account an uncorrelated Gaussian thresholds variability. We derive a mean-field approach and show its relevance by carrying out explicit Monte Carlo simulations. It turns out that such a disorder shifts the position of the percolation transition, impacts the size of the giant cluster, and can even destroy the transition. Moreover, we highlight the occurrence of disorder independent fixed points above the quorum critical value. The mean-field approach enables us to interpret these effects in terms of activation probability. A finite-size analysis enables us to show that the order parameter is weakly self-averaging with an exponent independent on the thresholds disorder. Last, we show that the effects of the thresholds and connectivity disorders cannot be easily discriminated from the measured averaged physical quantities. PMID:27575157
Many-body localization as percolation in d >1
NASA Astrophysics Data System (ADS)
Chandran, Anushya; Laumann, Chris; Gottesman, Daniel
2015-03-01
Statistical mechanics is the framework that connects thermodynamics to the microscopic world. It hinges on the assumption of equilibration. Isolated quantum systems need not equilibrate; this is the phenomenon of many-body localization (MBL). While a detailed understanding of MBL and the associated delocalization transition is beginning to emerge in one dimension, relatively little is known about higher dimensions. In this work, we present a minimal tractable model for MBL in all spatial dimensions. Specifically, we analyze a disordered Floquet circuit composed of Clifford gates. In one dimension, the system is always localized, while in higher dimensions, it exhibits both delocalized and localized phases. The localized phase consists of well-defined metallic puddles embedded in an insulating matrix. When the puddles percolate, the system delocalizes; this maps the dynamical transition to critical percolation. We also comment on the stability of the phases to generic perturbations away from the Clifford class.
Correlated Percolation Models of Jamming and Glass Transitions
NASA Astrophysics Data System (ADS)
Jeng, Monwhea; Schwarz, Jennifer
2007-03-01
Toninelli, Biroli, and Fisher recently introduced a model of correlated percolation called the Knight model, which they claimed to prove underwent a dynamical glass transition. This transition had novel properties, with a discontinuous jump in the order parameter, but with diverging time scales and correlation lengths. We show that their proof misidentified the critical point, so that these properties are currently unproven for this model. However, we show that these novel properties can in fact be proven for suitably modified models of correlated percolation, with qualitatively similar culling rules. We discuss the features of the models necessary for a rigorous proof to be possible. We also discuss properties of models such as the force balance model and the original Knight model, which appear to undergo novel transitions despite the lack of a rigorous proof of such a transition.
Finite-size effects and percolation properties of Poisson geometries
NASA Astrophysics Data System (ADS)
Larmier, C.; Dumonteil, E.; Malvagi, F.; Mazzolo, A.; Zoia, A.
2016-07-01
Random tessellations of the space represent a class of prototype models of heterogeneous media, which are central in several applications in physics, engineering, and life sciences. In this work, we investigate the statistical properties of d -dimensional isotropic Poisson geometries by resorting to Monte Carlo simulation, with special emphasis on the case d =3 . We first analyze the behavior of the key features of these stochastic geometries as a function of the dimension d and the linear size L of the domain. Then, we consider the case of Poisson binary mixtures, where the polyhedra are assigned two labels with complementary probabilities. For this latter class of random geometries, we numerically characterize the percolation threshold, the strength of the percolating cluster, and the average cluster size.
Quantum walk coherences on a dynamical percolation graph
NASA Astrophysics Data System (ADS)
Elster, Fabian; Barkhofen, Sonja; Nitsche, Thomas; Novotný, Jaroslav; Gábris, Aurél; Jex, Igor; Silberhorn, Christine
2015-08-01
Coherent evolution governs the behaviour of all quantum systems, but in nature it is often subjected to influence of a classical environment. For analysing quantum transport phenomena quantum walks emerge as suitable model systems. In particular, quantum walks on percolation structures constitute an attractive platform for studying open system dynamics of random media. Here, we present an implementation of quantum walks differing from the previous experiments by achieving dynamical control of the underlying graph structure. We demonstrate the evolution of an optical time-multiplexed quantum walk over six double steps, revealing the intricate interplay between the internal and external degrees of freedom. The observation of clear non-Markovian signatures in the coin space testifies the high coherence of the implementation and the extraordinary degree of control of all system parameters. Our work is the proof-of-principle experiment of a quantum walk on a dynamical percolation graph, paving the way towards complex simulation of quantum transport in random media.
Vulnerability of networks: Fractional percolation on random graphs
NASA Astrophysics Data System (ADS)
Shang, Yilun
2014-01-01
We present a theoretical framework for understanding nonbinary, nonindependent percolation on networks with general degree distributions. The model incorporates a partially functional (PF) state of nodes so that both intensity and extensity of error are characterized. Two connected nodes in a PF state cannot sustain the load and therefore break their link. We give exact solutions for the percolation threshold, the fraction of giant cluster, and the mean size of small clusters. The robustness-fragility transition point for scale-free networks with a degree distribution pk∝k-α is identified to be α =3. The analysis reveals that scale-free networks are vulnerable to targeted attack at hubs: a more complete picture of their Achilles' heel turns out to be not only the hubs themselves but also the edges linking them together.
Colloidal suspensions of C-particles: Entanglement, percolation and microrheology.
Hoell, Christian; Löwen, Hartmut
2016-05-01
We explore structural and dynamical behavior of concentrated colloidal suspensions made up by C-shape particles using Brownian dynamics computer simulations and theory. In particular, we focus on the entanglement process between nearby particles for almost closed C-shapes with a small opening angle. Depending on the opening angle and the particle concentration, there is a percolation transition for the cluster of entangled particles which shows the classical scaling characteristics. In a broad density range below the percolation threshold, we find a stretched exponential function for the dynamical decorrelation of the entanglement process. Finally, we study a setup typical in microrheology by dragging a single tagged particle with constant speed through the suspension. We measure the cluster connected to and dragged with this tagged particle. In agreement with a phenomenological theory, the size of the dragged cluster depends on the dragging direction and increases markedly with the dragging speed. PMID:27155650
Minimal spanning trees at the percolation threshold: a numerical calculation.
Sweeney, Sean M; Middleton, A Alan
2013-09-01
The fractal dimension of minimal spanning trees on percolation clusters is estimated for dimensions d up to d=5. A robust analysis technique is developed for correlated data, as seen in such trees. This should be a robust method suitable for analyzing a wide array of randomly generated fractal structures. The trees analyzed using these techniques are built using a combination of Prim's and Kruskal's algorithms for finding minimal spanning trees. This combination reduces memory usage and allows for simulation of larger systems than would otherwise be possible. The path length fractal dimension d_{s} of MSTs on critical percolation clusters is found to be compatible with the predictions of the perturbation expansion developed by T. S. Jackson and N. Read [Phys. Rev. E 81, 021131 (2010)]. PMID:24125235
Effect of threshold disorder on the quorum percolation model
NASA Astrophysics Data System (ADS)
Monceau, Pascal; Renault, Renaud; Métens, Stéphane; Bottani, Samuel
2016-07-01
We study the modifications induced in the behavior of the quorum percolation model on neural networks with Gaussian in-degree by taking into account an uncorrelated Gaussian thresholds variability. We derive a mean-field approach and show its relevance by carrying out explicit Monte Carlo simulations. It turns out that such a disorder shifts the position of the percolation transition, impacts the size of the giant cluster, and can even destroy the transition. Moreover, we highlight the occurrence of disorder independent fixed points above the quorum critical value. The mean-field approach enables us to interpret these effects in terms of activation probability. A finite-size analysis enables us to show that the order parameter is weakly self-averaging with an exponent independent on the thresholds disorder. Last, we show that the effects of the thresholds and connectivity disorders cannot be easily discriminated from the measured averaged physical quantities.
Random geometric graph description of connectedness percolation in rod systems
NASA Astrophysics Data System (ADS)
Chatterjee, Avik P.; Grimaldi, Claudio
2015-09-01
The problem of continuum percolation in dispersions of rods is reformulated in terms of weighted random geometric graphs. Nodes (or sites or vertices) in the graph represent spatial locations occupied by the centers of the rods. The probability that an edge (or link) connects any randomly selected pair of nodes depends upon the rod volume fraction as well as the distribution over their sizes and shapes, and also upon quantities that characterize their state of dispersion (such as the orientational distribution function). We employ the observation that contributions from closed loops of connected rods are negligible in the limit of large aspect ratios to obtain percolation thresholds that are fully equivalent to those calculated within the second-virial approximation of the connectedness Ornstein-Zernike equation. Our formulation can account for effects due to interactions between the rods, and many-body features can be partially addressed by suitable choices for the edge probabilities.
Concurrent enhancement of percolation and synchronization in adaptive networks.
Eom, Young-Ho; Boccaletti, Stefano; Caldarelli, Guido
2016-01-01
Co-evolutionary adaptive mechanisms are not only ubiquitous in nature, but also beneficial for the functioning of a variety of systems. We here consider an adaptive network of oscillators with a stochastic, fitness-based, rule of connectivity, and show that it self-organizes from fragmented and incoherent states to connected and synchronized ones. The synchronization and percolation are associated to abrupt transitions, and they are concurrently (and significantly) enhanced as compared to the non-adaptive case. Finally we provide evidence that only partial adaptation is sufficient to determine these enhancements. Our study, therefore, indicates that inclusion of simple adaptive mechanisms can efficiently describe some emergent features of networked systems' collective behaviors, and suggests also self-organized ways to control synchronization and percolation in natural and social systems. PMID:27251577
Concurrent enhancement of percolation and synchronization in adaptive networks
Eom, Young-Ho; Boccaletti, Stefano; Caldarelli, Guido
2016-01-01
Co-evolutionary adaptive mechanisms are not only ubiquitous in nature, but also beneficial for the functioning of a variety of systems. We here consider an adaptive network of oscillators with a stochastic, fitness-based, rule of connectivity, and show that it self-organizes from fragmented and incoherent states to connected and synchronized ones. The synchronization and percolation are associated to abrupt transitions, and they are concurrently (and significantly) enhanced as compared to the non-adaptive case. Finally we provide evidence that only partial adaptation is sufficient to determine these enhancements. Our study, therefore, indicates that inclusion of simple adaptive mechanisms can efficiently describe some emergent features of networked systems’ collective behaviors, and suggests also self-organized ways to control synchronization and percolation in natural and social systems. PMID:27251577
Differential CYP 2D6 Metabolism Alters Primaquine Pharmacokinetics
Potter, Brittney M. J.; Xie, Lisa H.; Vuong, Chau; Zhang, Jing; Zhang, Ping; Duan, Dehui; Luong, Thu-Lan T.; Bandara Herath, H. M. T.; Dhammika Nanayakkara, N. P.; Tekwani, Babu L.; Walker, Larry A.; Nolan, Christina K.; Sciotti, Richard J.; Zottig, Victor E.; Smith, Philip L.; Paris, Robert M.; Read, Lisa T.; Li, Qigui; Pybus, Brandon S.; Sousa, Jason C.; Reichard, Gregory A.
2015-01-01
Primaquine (PQ) metabolism by the cytochrome P450 (CYP) 2D family of enzymes is required for antimalarial activity in both humans (2D6) and mice (2D). Human CYP 2D6 is highly polymorphic, and decreased CYP 2D6 enzyme activity has been linked to decreased PQ antimalarial activity. Despite the importance of CYP 2D metabolism in PQ efficacy, the exact role that these enzymes play in PQ metabolism and pharmacokinetics has not been extensively studied in vivo. In this study, a series of PQ pharmacokinetic experiments were conducted in mice with differential CYP 2D metabolism characteristics, including wild-type (WT), CYP 2D knockout (KO), and humanized CYP 2D6 (KO/knock-in [KO/KI]) mice. Plasma and liver pharmacokinetic profiles from a single PQ dose (20 mg/kg of body weight) differed significantly among the strains for PQ and carboxy-PQ. Additionally, due to the suspected role of phenolic metabolites in PQ efficacy, these were probed using reference standards. Levels of phenolic metabolites were highest in mice capable of metabolizing CYP 2D6 substrates (WT and KO/KI 2D6 mice). PQ phenolic metabolites were present in different quantities in the two strains, illustrating species-specific differences in PQ metabolism between the human and mouse enzymes. Taking the data together, this report furthers understanding of PQ pharmacokinetics in the context of differential CYP 2D metabolism and has important implications for PQ administration in humans with different levels of CYP 2D6 enzyme activity. PMID:25645856
Arrangement of discs in 2d binary assemblies
NASA Astrophysics Data System (ADS)
Gervois, A.; Annic, C.; Lemaitre, J.; Ammi, M.; Oger, L.; Troadec, J.-P.
1995-02-01
We study arrangements of the two species of discs in binary assemblies at an intermediate scale. Small discs rearrange along large ones in clusters whose mass and compactness are analyzed with the tools of percolation. The assemblies are generated analogically on an air table or numerically from RSA or Powell algorithms. At a given packing fraction, an infinite cluster of small discs exists above a critical composition; a phenomenological expression for this threshold is proposed. Like in usual percolation problems, the number of inner links in a cluster is a linear function of its mass, with a slope depending both on the packing fraction, the composition of the mixture and the building procedure. An approximate expression is derived for it.
Microwave study of superconducting Sn films above and below percolation
NASA Astrophysics Data System (ADS)
Beutel, Manfred H.; Ebensperger, Nikolaj G.; Thiemann, Markus; Untereiner, Gabriele; Fritz, Vincent; Javaheri, Mojtaba; Nägele, Jonathan; Rösslhuber, Roland; Dressel, Martin; Scheffler, Marc
2016-08-01
The electronic properties of superconducting Sn films ({T}{{c}}≈ 3.8 {{K}}) change significantly when reducing the film thickness down to a few {nm}, in particular close to the percolation threshold. The low-energy electrodynamics of such Sn samples can be probed via microwave spectroscopy, e.g. with superconducting stripline resonators. Here we study Sn thin films, deposited via thermal evaporation—ranging in thickness between 38 and 842 {nm}—which encompasses the percolation transition. We use superconducting Pb stripline resonators to probe the microwave response of these Sn films in a frequency range between 4 and 20 {GHz} at temperatures from 7.2 down to 1.5 {{K}}. The measured quality factor of the resonators decreases with rising temperature due to enhanced losses. As a function of the sample thickness we observe three regimes with significantly different properties: samples below percolation, i.e. ensembles of disconnected superconducting islands, exhibit dielectric properties with negligible losses, demonstrating that macroscopic current paths are required for appreciable dynamical conductivity of Sn at GHz frequencies. Thick Sn films, as the other limit, lead to low-loss resonances both above and below T c of Sn, as expected for bulk conductors. But in an intermediate thickness regime, just above percolation and with labyrinth-like morphology of the Sn, we observe a quite different behavior: the superconducting state has a microwave response similar to the thicker, completely covering films with low microwave losses; but the metallic state of these Sn films is so lossy that resonator operation is suppressed completely.
Tritium percolation, convection, and permeation in fusion solid breeder blankets
Billone, M.C.; Liu, Y.Y.
1985-01-01
Models are developed to describe the percolation of released tritium through the breeder interconnected porosity to the purge stream, convection of tritium by the helium purge stream, and leakage or permeation of tritium through the structural material to the primary coolant system. Important parameters in the models are tritium generation rate, breeder microstructure, tritium species in the gas phase, temperatures, tritium diffusivities and permeabilities, and effectiveness of oxide barriers.
2D to 3D to 2D Dimensionality Crossovers in Thin BSCCO Films
NASA Astrophysics Data System (ADS)
Williams, Gary A.
2003-03-01
With increasing temperature the superfluid fraction in very thin BSCCO films undergoes a series of dimensionality crossovers. At low temperatures the strong anisotropy causes the thermal excitations to be 2D pancake-antipancake pairs in uncoupled layers. At higher temperatures where the c-axis correlation length becomes larger than a layer there is a crossover to 3D vortex loops. These are initially elliptical, but as the 3D Tc is approached they become more circular as the anisotropy scales away, as modeled by Shenoy and Chattopadhyay [1]. Close to Tc when the correlation length becomes comparable to the film thickness there is a further crossover to a 2D Kosterlitz-Thouless transition, with a drop of the superfluid fraction to zero at T_KT which can be of the order of 1 K below T_c. Good agreement with this model is found for experiments on thin BSCCO 2212 films [2]. 1. S. R. Shenoy and B. Chattopadhyay, Phys. Rev. B 51, 9129 (1995). 2. K. Osborn et al., cond-mat/0204417.
Mechanical characterization of 2D, 2D stitched, and 3D braided/RTM materials
NASA Technical Reports Server (NTRS)
Deaton, Jerry W.; Kullerd, Susan M.; Portanova, Marc A.
1993-01-01
Braided composite materials have potential for application in aircraft structures. Fuselage frames, floor beams, wing spars, and stiffeners are examples where braided composites could find application if cost effective processing and damage tolerance requirements are met. Another important consideration for braided composites relates to their mechanical properties and how they compare to the properties of composites produced by other textile composite processes being proposed for these applications. Unfortunately, mechanical property data for braided composites do not appear extensively in the literature. Data are presented in this paper on the mechanical characterization of 2D triaxial braid, 2D triaxial braid plus stitching, and 3D (through-the-thickness) braid composite materials. The braided preforms all had the same graphite tow size and the same nominal braid architectures, (+/- 30 deg/0 deg), and were resin transfer molded (RTM) using the same mold for each of two different resin systems. Static data are presented for notched and unnotched tension, notched and unnotched compression, and compression after impact strengths at room temperature. In addition, some static results, after environmental conditioning, are included. Baseline tension and compression fatigue results are also presented, but only for the 3D braided composite material with one of the resin systems.
The Fermi paradox: An approach based on percolation theory
NASA Technical Reports Server (NTRS)
Landis, Geoffrey A.
1993-01-01
If even a very small fraction of the hundred billion stars in the galaxy are home to technological civilizations which colonize over interstellar distances, the entire galaxy could be completely colonized in a few million years. The absence of such extraterrestrial civilizations visiting Earth is the Fermi paradox. A model for interstellar colonization is proposed using the assumption that there is a maximum distance over which direct interstellar colonization is feasible. Due to the time lag involved in interstellar communications, it is assumed that an interstellar colony will rapidly develop a culture independent of the civilization that originally settled it. Any given colony will have a probability P of developing a colonizing civilization, and a probability (1-P) that it will develop a non-colonizing civilization. These assumptions lead to the colonization of the galaxy occuring as a percolation problem. In a percolation problem, there will be a critical value of percolation probability, P(sub c). For P less than P(sub c), colonization will always terminate after a finite number of colonies. Growth will occur in 'clusters', with the outside of each cluster consisting of non-colonizing civilizations. For P greater than P(sub c), small uncolonized voids will exist, bounded by non-colonizing civilizations. For P approximately = to P(sub c), arbitrarily large filled regions exist, and also arbitrarily large empty regions.
Analysis of Cavity Volumes in Proteins Using Percolation Theory
NASA Astrophysics Data System (ADS)
Green, Sheridan; Jacobs, Donald; Farmer, Jenny
Molecular packing is studied in a diverse set of globular proteins in their native state ranging in size from 34 to 839 residues An new algorithm has been developed that builds upon the classic Hoshen-Kopelman algorithm for site percolation combined with a local connection criterion that classifies empty space within a protein as a cavity when large enough to hold a spherical shaped probe of radius, R, otherwise a microvoid. Although microvoid cannot fit an object (e.g. molecule or ion) that is the size of the probe or larger, total microvoid volume is a major contribution to protein volume. Importantly, the cavity and microvoid classification depends on probe radius. As probe size decreases, less microvoid forms in favor of more cavities. As probe size is varied from large to small, many disconnected cavities merge to form a percolating path. For fixed probe size, microvoid, cavity and solvent accessible boundary volume properties reflect conformational fluctuations. These results are visualized on three-dimensional structures. Analysis of the cluster statistics within the framework of percolation theory suggests interconversion between microvoid and cavity pathways regulate the dynamics of solvent penetration during partial unfolding events important to protein function.
Onsite synthesis of thermally percolated nanocomposite for thermal interface material
NASA Astrophysics Data System (ADS)
Obori, Masanao; Nita, Satoshi; Miura, Asuka; Shiomi, Junichiro
2016-02-01
To solve the problem of lack of thermal percolation in thermal interface materials (TIM), we propose a two-step synthesis method to realize thermally percolated nanofiber network in polymer matrix. First, by packing vapor grown carbon fibers (VGCFs) on top of aluminum heat sink and integrally sintering the whole material, the aluminum partially melts and connects the VGCF network, forming a continuous thermal path, i.e., realizing thermal percolation. Second, the pores in the hybrid network are filled by Silicone oil to obtain a polymer nanocomposite. The direct synthesis of VGCF-aluminum network on the heat sink (onsite synthesis) omits pasting process of the TIM, and thus, removes the restriction on the network morphology. By this onsite synthesis method, we reinforce thermal contact not only between the nanofibers but also between nanofibers and the heat sink. By testing the developed TIM for thermal contact to silicon surface, we demonstrate the potential to significantly reduce thermal contact resistance from what can be achieved by a conventional TIM.
Cities and regions in Britain through hierarchical percolation
Arcaute, Elsa; Molinero, Carlos; Hatna, Erez; Murcio, Roberto; Vargas-Ruiz, Camilo; Masucci, A. Paolo; Batty, Michael
2016-01-01
Urban systems present hierarchical structures at many different scales. These are observed as administrative regional delimitations which are the outcome of complex geographical, political and historical processes which leave almost indelible footprints on infrastructure such as the street network. In this work, we uncover a set of hierarchies in Britain at different scales using percolation theory on the street network and on its intersections which are the primary points of interaction and urban agglomeration. At the larger scales, the observed hierarchical structures can be interpreted as regional fractures of Britain, observed in various forms, from natural boundaries, such as National Parks, to regional divisions based on social class and wealth such as the well-known North–South divide. At smaller scales, cities are generated through recursive percolations on each of the emerging regional clusters. We examine the evolution of the morphology of the system as a whole, by measuring the fractal dimension of the clusters at each distance threshold in the percolation. We observe that this reaches a maximum plateau at a specific distance. The clusters defined at this distance threshold are in excellent correspondence with the boundaries of cities recovered from satellite images, and from previous methods using population density. PMID:27152211
Cities and regions in Britain through hierarchical percolation.
Arcaute, Elsa; Molinero, Carlos; Hatna, Erez; Murcio, Roberto; Vargas-Ruiz, Camilo; Masucci, A Paolo; Batty, Michael
2016-04-01
Urban systems present hierarchical structures at many different scales. These are observed as administrative regional delimitations which are the outcome of complex geographical, political and historical processes which leave almost indelible footprints on infrastructure such as the street network. In this work, we uncover a set of hierarchies in Britain at different scales using percolation theory on the street network and on its intersections which are the primary points of interaction and urban agglomeration. At the larger scales, the observed hierarchical structures can be interpreted as regional fractures of Britain, observed in various forms, from natural boundaries, such as National Parks, to regional divisions based on social class and wealth such as the well-known North-South divide. At smaller scales, cities are generated through recursive percolations on each of the emerging regional clusters. We examine the evolution of the morphology of the system as a whole, by measuring the fractal dimension of the clusters at each distance threshold in the percolation. We observe that this reaches a maximum plateau at a specific distance. The clusters defined at this distance threshold are in excellent correspondence with the boundaries of cities recovered from satellite images, and from previous methods using population density. PMID:27152211
The membrane skeleton of erythrocytes. A percolation model.
Saxton, M J
1990-01-01
The spectrin network on the cytoplasmic surface of the erythrocyte membrane is modeled as a triangular lattice of spectrin tetramers. This network obstructs lateral diffusion of proteins and provides mechanical reinforcement to the membrane. These effects are treated in a systematic and unified manner in terms of a percolation model. The diffusion coefficient is obtained as a function of the fraction of normal spectrin tetramers for both static and fluctuating barriers. The elasticity of the network is calculated as a function of the fraction of normal spectrin and the ratio of bending to stretching energies. For static barriers, elasticity and lateral diffusion are incompatible: if a network is connected enough to be elastic, it is connected enough to block long-range lateral diffusion. The elasticity and the force required for mechanical breakdown go to zero at the percolation threshold; experimental evidence suggests the existence of a stability threshold at or near the percolation threshold. The model is qualitatively applicable to other cells with membrane skeletons, such as epithelial cells, in which localization of membrane proteins is essential to differentiation. PMID:2393702
Length scale effects on percolation of geometrically complex nanocomposites
NASA Astrophysics Data System (ADS)
Hoffman, T. J.; Stevens, D. R.; Roberts, W. A.; Gorga, R. E.; Clarke, L. I.
2008-10-01
With growing interest in materials that include nanostructures the focus on nanocomposites (a polymer-based matrix that is enhanced by a nanometer sized particle) has grown. Electrospun nanocomposites contain a complex geometry including fiber sizes of 200 nm arranged in a random mat with a porosity of >= 70%. Composites utilize connected paths of particles throughout the sample to enhance the mechanical and electrical properties of the matrix. Previous literature has shown, in the case of continuous films, that this percolation phenomenon is affected by the sample size. This work aims to investigate these length scale effects within a complex morphology, such as a nanofiber mat. For a clear understanding of the change in percolation vs. length scale we fabricated interdigitated electrodes (IDEs) with a finger spacing of 10 to 100 μm, electrospun mats onto the IDEs, and performed electrical conductance measurements. In addition, computation simulations of the experimental systems were undertaken. I will discuss our results and the role sample size/shape plays on 1) the percolation threshold and 2) the conductivity vs. doping fraction curve.
General and exact approach to percolation on random graphs
NASA Astrophysics Data System (ADS)
Allard, Antoine; Hébert-Dufresne, Laurent; Young, Jean-Gabriel; Dubé, Louis J.
2015-12-01
We present a comprehensive and versatile theoretical framework to study site and bond percolation on clustered and correlated random graphs. Our contribution can be summarized in three main points. (i) We introduce a set of iterative equations that solve the exact distribution of the size and composition of components in finite-size quenched or random multitype graphs. (ii) We define a very general random graph ensemble that encompasses most of the models published to this day and also makes it possible to model structural properties not yet included in a theoretical framework. Site and bond percolation on this ensemble is solved exactly in the infinite-size limit using probability generating functions [i.e., the percolation threshold, the size, and the composition of the giant (extensive) and small components]. Several examples and applications are also provided. (iii) Our approach can be adapted to model interdependent graphs—whose most striking feature is the emergence of an extensive component via a discontinuous phase transition—in an equally general fashion. We show how a graph can successively undergo a continuous then a discontinuous phase transition, and preliminary results suggest that clustering increases the amplitude of the discontinuity at the transition.
Scaling of clusters near discontinuous percolation transitions in hyperbolic networks
NASA Astrophysics Data System (ADS)
Singh, Vijay; Boettcher, Stefan
2014-07-01
We investigate the onset of the discontinuous percolation transition in small-world hyperbolic networks by studying the systems-size scaling of the typical largest cluster approaching the transition, p ↗pc. To this end, we determine the average size of the largest cluster
Can percolation theory be applied to the stock market?
NASA Astrophysics Data System (ADS)
Stauffer, Dietrich
1998-11-01
The fluctuations of the stock market - the price changes per unit time - seem to deviate from Gaussians for short time steps. Power laws, exponentials, and multifractal descriptions have been offered to explain this short-time behavior. Microscopic models dealing with the decisions of single traders on the market have tried to reproduce this behavior. Possibly the simplest of these models is the herding approach of Cont and Bouchaud. Here a total of Nt traders cluster together randomly as in percolation theory. Each cluster randomly decides by buy or sell an amount proportional to its size, or not to trade. Monte Carlo simulations in two to seven dimensions at the percolation threshold depend on the number N of clusters trading within one time step. For N 1, the changes follow a power law; for 1 N Nt they are bell-shaped with power-law tails; for N Nt they crossover to a Gaussian. The correlations in the absolute value of the change decay slowly with time. Thus percolation not only describes the origin of life or the boiling of your breakfast egg, but also explains why we are not rich.
Percolative theories of strongly disordered ceramic high-temperature superconductors
Phillips, J. C.
2010-01-01
Optimally doped ceramic superconductors (cuprates, pnictides, etc.) exhibit transition temperatures T c much larger than strongly coupled metallic superconductors like Pb (T c = 7.2 K, E g/kT c = 4.5) and exhibit many universal features that appear to contradict the Bardeen, Cooper, and Schrieffer theory of superconductivity based on attractive electron-phonon pairing interactions. These complex materials are strongly disordered and contain several competing nanophases that cannot be described effectively by parameterized Hamiltonian models, yet their phase diagrams also exhibit many universal features in both the normal and superconductive states. Here we review the rapidly growing body of experimental results that suggest that these anomalously universal features are the result of marginal stabilities of the ceramic electronic and lattice structures. These dual marginal stabilities favor both electronic percolation of a dopant network and rigidity percolation of the deformed lattice network. This “double percolation” model has previously explained many features of the normal-state transport properties of these materials and is the only theory that has successfully predicted strict lowest upper bounds for T c in the cuprate and pnictide families. Here it is extended to include Coulomb correlations and percolative band narrowing, as well as an angular energy gap equation, which rationalizes angularly averaged gap/T c ratios, and shows that these are similar to those of conventional strongly coupled superconductors. PMID:20080578
Differential Cytochrome P450 2D Metabolism Alters Tafenoquine Pharmacokinetics
Vuong, Chau; Xie, Lisa H.; Potter, Brittney M. J.; Zhang, Jing; Zhang, Ping; Duan, Dehui; Nolan, Christina K.; Sciotti, Richard J.; Zottig, Victor E.; Nanayakkara, N. P. Dhammika; Tekwani, Babu L.; Walker, Larry A.; Smith, Philip L.; Paris, Robert M.; Read, Lisa T.; Li, Qigui; Pybus, Brandon S.; Sousa, Jason C.; Reichard, Gregory A.; Smith, Bryan
2015-01-01
Cytochrome P450 (CYP) 2D metabolism is required for the liver-stage antimalarial efficacy of the 8-aminoquinoline molecule tafenoquine in mice. This could be problematic for Plasmodium vivax radical cure, as the human CYP 2D ortholog (2D6) is highly polymorphic. Diminished CYP 2D6 enzyme activity, as in the poor-metabolizer phenotype, could compromise radical curative efficacy in humans. Despite the importance of CYP 2D metabolism for tafenoquine liver-stage efficacy, the exact role that CYP 2D metabolism plays in the metabolism and pharmacokinetics of tafenoquine and other 8-aminoquinoline molecules has not been extensively studied. In this study, a series of tafenoquine pharmacokinetic experiments were conducted in mice with different CYP 2D metabolism statuses, including wild-type (WT) (reflecting extensive metabolizers for CYP 2D6 substrates) and CYPmouse 2D knockout (KO) (reflecting poor metabolizers for CYP 2D6 substrates) mice. Plasma and liver pharmacokinetic profiles from a single 20-mg/kg of body weight dose of tafenoquine differed between the strains; however, the differences were less striking than previous results obtained for primaquine in the same model. Additionally, the presence of a 5,6-ortho-quinone tafenoquine metabolite was examined in both mouse strains. The 5,6-ortho-quinone species of tafenoquine was observed, and concentrations of the metabolite were highest in the WT extensive-metabolizer phenotype. Altogether, this study indicates that CYP 2D metabolism in mice affects tafenoquine pharmacokinetics and could have implications for human tafenoquine pharmacokinetics in polymorphic CYP 2D6 human populations. PMID:25870069
A Geometric Boolean Library for 2D Objects
2006-01-05
The 2D Boolean Library is a collection of C++ classes -- which primarily represent 2D geometric data and relationships, and routines -- which contain algorithms for 2D geometric Boolean operations and utility functions. Classes are provided for 2D points, lines, arcs, edgeuses, loops, surfaces and mask sets. Routines are provided that incorporate the Boolean operations Union(OR), XOR, Intersection and Difference. Various analytical geometry routines and routines for importing and exporting the data in various filemore » formats, are also provided in the library.« less
A Geometric Boolean Library for 2D Objects
McBride, Corey L.; Yarberry, Victor; Jorgensen, Craig
2006-01-05
The 2D Boolean Library is a collection of C++ classes -- which primarily represent 2D geometric data and relationships, and routines -- which contain algorithms for 2D geometric Boolean operations and utility functions. Classes are provided for 2D points, lines, arcs, edgeuses, loops, surfaces and mask sets. Routines are provided that incorporate the Boolean operations Union(OR), XOR, Intersection and Difference. Various analytical geometry routines and routines for importing and exporting the data in various file formats, are also provided in the library.
NASA Astrophysics Data System (ADS)
Scharenberg, R. P.; Srivastava, B. K.; Hirsch, A. S.
2011-01-01
The Color String Percolation Model (CSPM) is used to determine the equation of state (EOS) of the Quark-Gluon Plasma (QGP) produced in central Au-Au collisions at sqrt{s_{mathit{NN}}} = 200 A GeV using STAR data at RHIC. When the initial density of interacting colored strings exceeds the 2D percolation threshold a cluster is formed, which defines the onset of color deconfinement. These interactions also produce fluctuations in the string tension which transforms the Schwinger particle (gluon) production mechanism into a maximum entropy thermal distribution analogous to QCD Hawking-Unruh radiation. The single string tension is determined by identifying the known value of the universal hadron limiting temperature T c =167.7±2.6 MeV with the CSPM temperature at the critical percolation threshold parameter ξ c =1.2. At midrapidity the initial Bjorken energy density and the initial temperature determine the number of degrees of freedom consistent with the formation of a ˜2+1 flavor QGP. An analytic expression for the equation of state, the sound velocity Cs2(ξ) is obtained in CSPM. The CSPM Cs2(ξ) and the bulk thermodynamic values energy density ɛ/ T 4 and entropy density s/ T 3 are in excellent agreement in the phase transition region with recent lattice QCD simulations (LQCD) by the HotQCD Collaboration.
AnisWave2D: User's Guide to the 2d Anisotropic Finite-DifferenceCode
Toomey, Aoife
2005-01-06
This document describes a parallel finite-difference code for modeling wave propagation in 2D, fully anisotropic materials. The code utilizes a mesh refinement scheme to improve computational efficiency. Mesh refinement allows the grid spacing to be tailored to the velocity model, so that fine grid spacing can be used in low velocity zones where the seismic wavelength is short, and coarse grid spacing can be used in zones with higher material velocities. Over-sampling of the seismic wavefield in high velocity zones is therefore avoided. The code has been implemented to run in parallel over multiple processors and allows large-scale models and models with large velocity contrasts to be simulated with ease.
Klassifikation von Standardebenen in der 2D-Echokardiographie mittels 2D-3D-Bildregistrierung
NASA Astrophysics Data System (ADS)
Bergmeir, Christoph; Subramanian, Navneeth
Zum Zweck der Entwicklung eines Systems, das einen unerfahrenen Anwender von Ultraschall (US) zur Aufnahme relevanter anatomischer Strukturen leitet, untersuchen wir die Machbarkeit von 2D-US zu 3D-CT Registrierung. Wir verwenden US-Aufnahmen von Standardebenen des Herzens, welche zu einem 3D-CT-Modell registriert werden. Unser Algorithmus unterzieht sowohl die US-Bilder als auch den CT-Datensatz Vorverarbeitungsschritten, welche die Daten durch Segmentierung auf wesentliche Informationen in Form von Labein für Muskel und Blut reduzieren. Anschließend werden diese Label zur Registrierung mittels der Match-Cardinality-Metrik genutzt. Durch mehrmaliges Registrieren mit verschiedenen Initialisierungen ermitteln wir die im US-Bild sichtbare Standardebene. Wir evaluierten die Methode auf sieben US-Bildern von Standardebenen. Fünf davon wurden korrekt zugeordnet.
NASA Astrophysics Data System (ADS)
Miao, Shun; Lucas, Joseph; Liao, Rui
2012-02-01
Minimally invasive abdominal aortic aneurysm (AAA) stenting can be greatly facilitated by overlaying the preoperative 3-D model of the abdominal aorta onto the intra-operative 2-D X-ray images. Accurate 2-D/3-D registration in 3-D space makes the 2-D/3-D overlay robust to the change of C-Arm angulations. By far, the 2-D/3-D registration methods based on simulated X-ray projection images using multiple image planes have been shown to be able to provide satisfactory 3-D registration accuracy. However, one drawback of the intensity-based 2-D/3-D registration methods is that the similarity measure is usually highly non-convex and hence the optimizer can easily be trapped into local minima. User interaction therefore is often needed in the initialization of the position of the 3-D model in order to get a successful 2-D/3-D registration. In this paper, a novel 3-D pose initialization technique is proposed, as an extension of our previously proposed bi-plane 2-D/3-D registration method for AAA intervention [4]. The proposed method detects vessel bifurcation points and spine centerline in both 2-D and 3-D images, and utilizes landmark information to bring the 3-D volume into a 15mm capture range. The proposed landmark detection method was validated on real dataset, and is shown to be able to provide a good initialization for 2-D/3-D registration in [4], thus making the workflow fully automatic.
Functional characterization of CYP2D6 enhancer polymorphisms
Wang, Danxin; Papp, Audrey C.; Sun, Xiaochun
2015-01-01
CYP2D6 metabolizes nearly 25% of clinically used drugs. Genetic polymorphisms cause large inter-individual variability in CYP2D6 enzyme activity and are currently used as biomarker to predict CYP2D6 metabolizer phenotype. Previously, we had identified a region 115 kb downstream of CYP2D6 as enhancer for CYP2D6, containing two completely linked single nucleotide polymorphisms (SNPs), rs133333 and rs5758550, associated with enhanced transcription. However, the enhancer effect on CYP2D6 expression, and the causative variant, remained to be ascertained. To characterize the CYP2D6 enhancer element, we applied chromatin conformation capture combined with the next-generation sequencing (4C assays) and chromatin immunoprecipitation with P300 antibody, in HepG2 and human primary culture hepatocytes. The results confirmed the role of the previously identified enhancer region in CYP2D6 expression, expanding the number of candidate variants to three highly linked SNPs (rs133333, rs5758550 and rs4822082). Among these, only rs5758550 demonstrated regulating enhancer activity in a reporter gene assay. Use of clustered regularly interspaced short palindromic repeats mediated genome editing in HepG2 cells targeting suspected enhancer regions decreased CYP2D6 mRNA expression by 70%, only upon deletion of the rs5758550 region. These results demonstrate robust effects of both the enhancer element and SNP rs5758550 on CYP2D6 expression, supporting consideration of rs5758550 for CYP2D6 genotyping panels to yield more accurate phenotype prediction. PMID:25381333
Graphene liquid crystal retarded percolation for new high-k materials.
Yuan, Jinkai; Luna, Alan; Neri, Wilfrid; Zakri, Cécile; Schilling, Tanja; Colin, Annie; Poulin, Philippe
2015-01-01
Graphene flakes with giant shape anisotropy are extensively used to establish connectedness electrical percolation in various heterogeneous systems. However, the percolation behaviour of graphene flakes has been recently predicted to be far more complicated than generally anticipated on the basis of excluded volume arguments. Here we confirm experimentally that graphene flakes self-assemble into nematic liquid crystals below the onset of percolation. The competition of percolation and liquid crystal transition provides a new route towards high-k materials. Indeed, near-percolated liquid-crystalline graphene-based composites display unprecedented dielectric properties with a dielectric constant improved by 260-fold increase as compared with the polymer matrix, while maintaining the loss tangent as low as 0.4. This performance is shown to depend on the structure of monodomains of graphene liquid-crystalline phases. Insights into how the liquid crystal phase transition interferes with percolation transition and thus alters the dielectric constant are discussed. PMID:26567720
Graphene liquid crystal retarded percolation for new high-k materials
NASA Astrophysics Data System (ADS)
Yuan, Jinkai; Luna, Alan; Neri, Wilfrid; Zakri, Cécile; Schilling, Tanja; Colin, Annie; Poulin, Philippe
2015-11-01
Graphene flakes with giant shape anisotropy are extensively used to establish connectedness electrical percolation in various heterogeneous systems. However, the percolation behaviour of graphene flakes has been recently predicted to be far more complicated than generally anticipated on the basis of excluded volume arguments. Here we confirm experimentally that graphene flakes self-assemble into nematic liquid crystals below the onset of percolation. The competition of percolation and liquid crystal transition provides a new route towards high-k materials. Indeed, near-percolated liquid-crystalline graphene-based composites display unprecedented dielectric properties with a dielectric constant improved by 260-fold increase as compared with the polymer matrix, while maintaining the loss tangent as low as 0.4. This performance is shown to depend on the structure of monodomains of graphene liquid-crystalline phases. Insights into how the liquid crystal phase transition interferes with percolation transition and thus alters the dielectric constant are discussed.
Graphene liquid crystal retarded percolation for new high-k materials
Yuan, Jinkai; Luna, Alan; Neri, Wilfrid; Zakri, Cécile; Schilling, Tanja; Colin, Annie; Poulin, Philippe
2015-01-01
Graphene flakes with giant shape anisotropy are extensively used to establish connectedness electrical percolation in various heterogeneous systems. However, the percolation behaviour of graphene flakes has been recently predicted to be far more complicated than generally anticipated on the basis of excluded volume arguments. Here we confirm experimentally that graphene flakes self-assemble into nematic liquid crystals below the onset of percolation. The competition of percolation and liquid crystal transition provides a new route towards high-k materials. Indeed, near-percolated liquid-crystalline graphene-based composites display unprecedented dielectric properties with a dielectric constant improved by 260-fold increase as compared with the polymer matrix, while maintaining the loss tangent as low as 0.4. This performance is shown to depend on the structure of monodomains of graphene liquid-crystalline phases. Insights into how the liquid crystal phase transition interferes with percolation transition and thus alters the dielectric constant are discussed. PMID:26567720
Continuum percolation on nonorientable surfaces: the problem of permeable disks on a Klein bottle
NASA Astrophysics Data System (ADS)
Borman, V. D.; Grekhov, A. M.; Tronin, V. N.; Tronin, I. V.
2015-11-01
The percolation threshold and wrapping probability (R ∞) for the two-dimensional problem of continuum percolation on the surface of a Klein bottle have been calculated by the Monte Carlo method with the Newman-Ziff algorithm for completely permeable disks. It has been shown that the percolation threshold of disks on the Klein bottle coincides with the percolation threshold of disks on the surface of a torus, indicating that this threshold is topologically invariant. The scaling exponents determining corrections to the wrapping probability and critical concentration owing to the finite-size effects are also topologically invariant. At the same time, the quantities R ∞ are different for percolation on the torus and Klein bottle and are apparently determined by the topology of the surface. Furthermore, the difference between the R ∞ values for the torus and Klein bottle means that at least one of the percolation clusters is degenerate.
NASA Astrophysics Data System (ADS)
Chae, Dongho; Constantin, Peter; Wu, Jiahong
2014-09-01
We give an example of a well posed, finite energy, 2D incompressible active scalar equation with the same scaling as the surface quasi-geostrophic equation and prove that it can produce finite time singularities. In spite of its simplicity, this seems to be the first such example. Further, we construct explicit solutions of the 2D Boussinesq equations whose gradients grow exponentially in time for all time. In addition, we introduce a variant of the 2D Boussinesq equations which is perhaps a more faithful companion of the 3D axisymmetric Euler equations than the usual 2D Boussinesq equations.
Efficient Visible Quasi-2D Perovskite Light-Emitting Diodes.
Byun, Jinwoo; Cho, Himchan; Wolf, Christoph; Jang, Mi; Sadhanala, Aditya; Friend, Richard H; Yang, Hoichang; Lee, Tae-Woo
2016-09-01
Efficient quasi-2D-structure perovskite light-emitting diodes (4.90 cd A(-1) ) are demonstrated by mixing a 3D-structured perovskite material (methyl ammonium lead bromide) and a 2D-structured perovskite material (phenylethyl ammonium lead bromide), which can be ascribed to better film uniformity, enhanced exciton confinement, and reduced trap density. PMID:27334788
Integrating Mobile Multimedia into Textbooks: 2D Barcodes
ERIC Educational Resources Information Center
Uluyol, Celebi; Agca, R. Kagan
2012-01-01
The major goal of this study was to empirically compare text-plus-mobile phone learning using an integrated 2D barcode tag in a printed text with three other conditions described in multimedia learning theory. The method examined in the study involved modifications of the instructional material such that: a 2D barcode was used near the text, the…
Van der Waals stacked 2D layered materials for optoelectronics
NASA Astrophysics Data System (ADS)
Zhang, Wenjing; Wang, Qixing; Chen, Yu; Wang, Zhuo; Wee, Andrew T. S.
2016-06-01
The band gaps of many atomically thin 2D layered materials such as graphene, black phosphorus, monolayer semiconducting transition metal dichalcogenides and hBN range from 0 to 6 eV. These isolated atomic planes can be reassembled into hybrid heterostructures made layer by layer in a precisely chosen sequence. Thus, the electronic properties of 2D materials can be engineered by van der Waals stacking, and the interlayer coupling can be tuned, which opens up avenues for creating new material systems with rich functionalities and novel physical properties. Early studies suggest that van der Waals stacked 2D materials work exceptionally well, dramatically enriching the optoelectronics applications of 2D materials. Here we review recent progress in van der Waals stacked 2D materials, and discuss their potential applications in optoelectronics.
Unitary quantum lattice gas representation of 2D quantum turbulence
NASA Astrophysics Data System (ADS)
Zhang, Bo; Vahala, George; Vahala, Linda; Soe, Min
2011-05-01
Quantum vortex structures and energy cascades are examined for two dimensional quantum turbulence (2D QT) using a special unitary evolution algorithm. The qubit lattice gas (QLG) algorithm, is employed to simulate the weakly-coupled Bose-Einstein condensate (BEC) governed by the Gross-Pitaevskii (GP) equation. A parameter regime is uncovered in which, as in 3D QT, there is a very short Poincare recurrence time. This short recurrence time is destroyed as the nonlinear interaction energy is increased. Energy cascades for 2D QT are considered to examine whether 2D QT exhibits the inverse cascades of 2D classical turbulence. In the parameter regime considered, the spectra analysis reveals no such dual cascades---dual cascades being a hallmark of 2D classical turbulence.
CYP2D6 polymorphism in patients with eating disorders.
Peñas-Lledó, E M; Dorado, P; Agüera, Z; Gratacós, M; Estivill, X; Fernández-Aranda, F; Llerena, A
2012-04-01
CYP2D6 polymorphism is associated with variability in drug response, endogenous metabolism (that is, serotonin), personality, neurocognition and psychopathology. The relationship between CYP2D6 genetic polymorphism and the risk of eating disorders (ED) was analyzed in 267 patients with ED and in 285 controls. A difference in the CYP2D6 active allele distribution was found between these groups. Women carrying more than two active genes (ultrarapid metabolizers) (7.5 vs 4.6%) or two (67 vs 58.9%) active genes were more frequent among patients with ED, whereas those with one (20.6 vs 30.2%) or zero active genes (4.9 vs 6.3%) were more frequent among controls (P<0.05). Although further research is needed, present findings suggest an association between CYP2D6 and ED. CYP2D6 allele distribution in patients with ED seems related to increased enzyme activity. PMID:20877302
2D materials and van der Waals heterostructures.
Novoselov, K S; Mishchenko, A; Carvalho, A; Castro Neto, A H
2016-07-29
The physics of two-dimensional (2D) materials and heterostructures based on such crystals has been developing extremely fast. With these new materials, truly 2D physics has begun to appear (for instance, the absence of long-range order, 2D excitons, commensurate-incommensurate transition, etc.). Novel heterostructure devices--such as tunneling transistors, resonant tunneling diodes, and light-emitting diodes--are also starting to emerge. Composed from individual 2D crystals, such devices use the properties of those materials to create functionalities that are not accessible in other heterostructures. Here we review the properties of novel 2D crystals and examine how their properties are used in new heterostructure devices. PMID:27471306
NASA Astrophysics Data System (ADS)
Cattan, P.; Voltz, M.; Cabidoche, Y.-M.; Lacas, J.-G.; Sansoulet, J.
2007-03-01
SummarySpatial variability in percolation fluxes was studied in field plots cropped with banana plants, which induce very heterogeneous rainfall partitioning at the soil surface, with high subsequent infiltration in Andosols. Percolation fluxes were measured for just over a year at 1-7 day intervals in eight wick (WL) and gravity lysimeters (GL) that had been buried in the soil at a depth of 60 cm. The results revealed that WL captured unsaturated fluxes while GL only functioned after ponding occurred. The percolation flux measurements were highly biased with both systems, i.e. overpercolation with WL and underpercolation with GL. Percolation fluxes seemed, however, to be mainly unsaturated in the soil types studied. High percolation flux variability was noted on a plot scale, which could be explained by the vegetation structure: total percolation flux (WL) was 2.1-fold higher under banana plants; saturated percolation flux (GL) was 7-fold higher under banana plants and almost absent between banana plants. Eighty-eight per cent of the total variance in percolation flux could be explained by the rainfall intensity under the banana canopy, calculated while taking the rainfall partitioning by the vegetation and the initial water status into account. The number of lysimeters required for assessing percolation flux in a field plot can be reduced by taking the spatial patterns of the flux boundary conditions into account.
Series Expansion Method for Asymmetrical Percolation Models with Two Connection Probabilities
NASA Astrophysics Data System (ADS)
Inui, Norio; Komatsu, Genichi; Kameoka, Koichi
2000-01-01
In order to study the solvability of the percolation model based on Guttmann and Enting's conjecture, the power series for the percolation probability in the form of ∑nHn(q)pn is examined. Although the power series is given by calculating inverse of the transfer-matrix in principle, it is very hard to obtain the inverse matrix containing many complex polynomials as elements. We introduce a new series expansion technique which does not necessitate inverse operation for the transfer-matrix.By using the new procedure, we derive the series of the asymmetrical percolation probability including the isotropic percolation probability as a special case.
NASA Astrophysics Data System (ADS)
Shehzad, Khurram; Hakro, Ayaz Ali; Zeng, You; Yao, Shang-Hong; Xiao-Hong, Yi; Mumtaz, Muhammad; Nadeem, Kashif; Khisro, Nasir Said; Dang, Zhi-Min
2015-11-01
Pristine carbon nanotube (CNT)/elastomer composites were fabricated using pristine multi-walled carbon nanotubes and a thermoplastic elastomer. These composites exhibited a unique phenomenon of two electrical percolation thresholds that invoked very high dielectric values for the resulting composites. The first percolation was associated with a relatively low dielectric constant value of about 100, while in the vicinity of the second percolation threshold a very high dielectric constant value of 8,000 was achieved. The presence of two percolation thresholds was attributed to the unique distribution patterns of CNTs that ensued in a CNT/elastomer composite system with unique electrical properties.
Percolation in spatial evolutionary prisoner's dilemma game on two-dimensional lattices
NASA Astrophysics Data System (ADS)
Choi, Woosik; Yook, Soon-Hyung; Kim, Yup
2015-11-01
We study the spatial evolutionary prisoner's dilemma game with updates of imitation max on triangular, hexagonal, and square lattices. We use the weak prisoner's dilemma game with a single parameter b . Due to the competition between the temptation value b and the coordination number z of the base lattice, a greater variety of percolation properties is expected to occur on the lattice with the larger z . From the numerical analysis, we find six different regimes on the triangular lattice (z =6 ). Regardless of the initial densities of cooperators and defectors, cooperators always percolate in the steady state in two regimes for small b . In these two regimes, defectors do not percolate. In two regimes for the intermediate value of b , both cooperators and defectors undergo percolation transitions. The defector always percolates in two regimes for large b . On the hexagonal lattice (z =3 ), there exist two distinctive regimes. For small b , both the cooperators and the defectors undergo percolation transitions while only defectors always percolate for large b . On the square lattice (z =4 ), there exist three regimes. Combining with the finite-size scaling analyses, we show that all the observed percolation transitions belong to the universality class of the random percolation. We also show how the detailed growth mechanism of cooperator and defector clusters decides each regime.
Rigidity percolation in dispersions with a structured viscoelastic matrix
NASA Astrophysics Data System (ADS)
Wilbrink, M. W. L.; Michels, M. A. J.; Vellinga, W. P.; Meijer, H. E. H.
2005-03-01
This paper deals with rigidity percolation in composite materials consisting of a dispersion of mineral particles in a microstructured viscoelastic matrix. The viscoelastic matrix in this specific case is a hydrocarbon refinery residue. In a set of model random composites the mean interparticle surface-to-surface distance was controlled, changing particle volume fraction φ and particle number density independently. This was achieved by mixing two sets of monodisperse particles with widely differing radii ( 0.35μm and 17.5μm ) with the matrix. A scaling exponent of 3.9±0.6 for the storage modulus G' vs φ-φc was observed above a threshold φc , in good agreement with theoretical values for rigidity percolation. It is found that at the rigidity-percolation threshold the pore structure, as characterized by the mean surface-to-surface distance for the filler, rather than the filler volume fraction, is similar for different types of composites. This behavior is explained from the internal structure of the viscoelastic matrix, which consists of fractal solid aggregates dissolved in a viscous medium; the effective radius of these aggregates and the mean surface-to-surface distance together determine whether or not the aggregates are capable of providing rigidity to the composite. The explanation is further supported by a qualitative comparison with effective-medium calculations. These indicate that the observed breakdown of time-temperature superposition near φc is due to the appearance of a time scale characteristic for the mechanical interplay between the viscous binder phase and the purely elastic solid particles.
Predicting deep percolation with eddy covariance under mulch drip irrigation
NASA Astrophysics Data System (ADS)
Ming, Guanghui; Tian, Fuqiang; Hu, Hongchang
2016-04-01
Water is essential for the agricultural development and ecological sustainability of the arid and semi-arid oasis with rare precipitation input and high evaporation demand. Deep percolation (DP) defined as excess irrigation water percolating below the plant root zone will reduce irrigation water use efficiency (WUE). But the DP was often ignored in mulch drip irrigation (MDI) which has reached the area of 1.6 million hectares in Xinjiang, the northwest of China. In this study DP experiments were conducted at an agricultural experiment station located within an irrigation district in the Tarim River Basin for four cotton growing periods. First it was detected the irrigation water infiltrated into the soil layers below 100cm and the groundwater level responded to the irrigation events well. Then DP below 100cm soil layers was calculated using the soil water balance method with the aid of eddy covariance (with the energy balance closure of 0.72). The negative DP (groundwater contribution to the crop-water use through capillary rising) at the seedling and harvesting stages can reach 77mm and has a good negative correlation with the groundwater level and positive correlation with potential evaporation. During the drip irrigation stage approximately 45% of the irrigation became DP and resulted in the low irrigation WUE of 0.6. The DP can be 164mm to 270mm per year which was positive linearly correlated to irrigation depth and negative linear correlated to irrigation interval. It is better to establish the irrigation schedule with small irrigation depth and given frequently to reduce deep percolation and meet crop needs.
Limited-path-length entanglement percolation in quantum complex networks
NASA Astrophysics Data System (ADS)
Cuquet, Martí; Calsamiglia, John
2011-03-01
We study entanglement distribution in quantum complex networks where nodes are connected by bipartite entangled states. These networks are characterized by a complex structure, which dramatically affects how information is transmitted through them. For pure quantum state links, quantum networks exhibit a remarkable feature absent in classical networks: it is possible to effectively rewire the network by performing local operations on the nodes. We propose a family of such quantum operations that decrease the entanglement percolation threshold of the network and increase the size of the giant connected component. We provide analytic results for complex networks with an arbitrary (uncorrelated) degree distribution. These results are in good agreement with numerical simulations, which also show enhancement in correlated and real-world networks. The proposed quantum preprocessing strategies are not robust in the presence of noise. However, even when the links consist of (noisy) mixed-state links, one can send quantum information through a connecting path with a fidelity that decreases with the path length. In this noisy scenario, complex networks offer a clear advantage over regular lattices, namely, the fact that two arbitrary nodes can be connected through a relatively small number of steps, known as the small-world effect. We calculate the probability that two arbitrary nodes in the network can successfully communicate with a fidelity above a given threshold. This amounts to working out the classical problem of percolation with a limited path length. We find that this probability can be significant even for paths limited to few connections and that the results for standard (unlimited) percolation are soon recovered if the path length exceeds by a finite amount the average path length, which in complex networks generally scales logarithmically with the size of the network.
From damage percolation to crack nucleation through finite size criticality.
Shekhawat, Ashivni; Zapperi, Stefano; Sethna, James P
2013-05-01
We present a unified theory of fracture in disordered brittle media that reconciles apparently conflicting results reported in the literature. Our renormalization group based approach yields a phase diagram in which the percolation fixed point, expected for infinite disorder, is unstable for finite disorder and flows to a zero-disorder nucleation-type fixed point, thus showing that fracture has a mixed first order and continuous character. In a region of intermediate disorder and finite system sizes, we predict a crossover with mean-field avalanche scaling. We discuss intriguing connections to other phenomena where critical scaling is only observed in finite size systems and disappears in the thermodynamic limit. PMID:23683218
Inequality for the infinite-cluster density in Bernoulli percolation
Chayes, J.T.; Chayes, L.
1986-04-21
Under a certain assumption (which is satisfied whenever there is a dense infinite cluster in the half-space), we prove a differential inequality for the infinite-cluster density, P/sub infinity/(p), in Bernoulli percolation. The principal implication of this result is that if P/sub infinity/(p) vanishes with critical exponent ..beta.., then ..beta.. obeys the mean-field bound ..beta..< or =1. As a corollary, we also derive an inequality relating the backbone density, the truncated susceptibility, and the infinite-cluster density.
Tight Lower Bound for Percolation Threshold on an Infinite Graph
NASA Astrophysics Data System (ADS)
Hamilton, Kathleen E.; Pryadko, Leonid P.
2014-11-01
We construct a tight lower bound for the site percolation threshold on an infinite graph, which becomes exact for an infinite tree. The bound is given by the inverse of the maximal eigenvalue of the Hashimoto matrix used to count nonbacktracking walks on the original graph. Our bound always exceeds the inverse spectral radius of the graph's adjacency matrix, and it is also generally tighter than the existing bound in terms of the maximum degree. We give a constructive proof for existence of such an eigenvalue in the case of a connected infinite quasitransitive graph, a graph-theoretic analog of a translationally invariant system.
Percolation, sliding, localization and relaxation in topologically closed circuits
Hurowitz, Daniel; Cohen, Doron
2016-01-01
Considering a random walk in a random environment in a topologically closed circuit, we explore the implications of the percolation and sliding transitions for its relaxation modes. A complementary question regarding the “delocalization” of eigenstates of non-hermitian Hamiltonians has been addressed by Hatano, Nelson, and followers. But we show that for a conservative stochastic process the implied spectral properties are dramatically different. In particular we determine the threshold for under-damped relaxation, and observe “complexity saturation” as the bias is increased. PMID:26961586
Percolation and coarsening in the bidimensional voter model
NASA Astrophysics Data System (ADS)
Tartaglia, Alessandro; Cugliandolo, Leticia F.; Picco, Marco
2015-10-01
We study the bidimensional voter model on a square lattice with numerical simulations. We demonstrate that the evolution takes place in two distinct dynamic regimes; a first approach towards critical site percolation and a further approach towards full consensus. We calculate the time dependence of the two growing lengths, finding that they are both algebraic but with different exponents (apart from possible logarithmic corrections). We analyze the morphology and statistics of clusters of voters with the same opinion. We compare these results to the ones for curvature driven two-dimensional coarsening.
Percolation Theory for the Distribution and Abundance of Species
NASA Astrophysics Data System (ADS)
He, Fangliang; Hubbell, Stephen P.
2003-11-01
We develop and test new models that unify the mathematical relationships among the abundance of a species, the spatial dispersion of the species, the number of patches occupied by the species, the edge length of the occupied patches, and the scale on which the distribution of species is mapped. The models predict that species distributions will exhibit percolation critical thresholds, i.e., critical population abundances at which the fragmented patches (as measured by the number of patches and edge length) start to coalesce to form large patches.
RAPID COMMUNICATION: Percolation modelling for highly aligned polycrystalline superconducting tapes
NASA Astrophysics Data System (ADS)
Rutter, N. A.; Glowacki, B. A.; Evetts, J. E.
2000-11-01
Surface and bulk texture measurements have been carried out on highly aligned NiFe tapes, suitable for use as coated conductor substrates. Data from small-area electron backscatter diffraction measurements are compared with those from bulk x-ray analysis in the development of a two-dimensional percolation model, and the two are shown to give very similar results. No evidence of grain-to-grain correlation is found. The model is then developed to assess how the properties of a superconducting layer grown epitaxially on buffered tapes will depend on parameters such as sample size, grain size and the extent of grain alignment.
Fixed-energy sandpiles belong generically to directed percolation.
Basu, Mahashweta; Basu, Urna; Bondyopadhyay, Sourish; Mohanty, P K; Hinrichsen, Haye
2012-07-01
Fixed-energy sandpiles with stochastic update rules are known to exhibit a nonequilibrium phase transition from an active phase into infinitely many absorbing states. Examples include the conserved Manna model, the conserved lattice gas, and the conserved threshold transfer process. It is believed that the transitions in these models belong to an autonomous universality class of nonequilibrium phase transitions, the so-called Manna class. Contrarily, the present numerical study of selected (1+1)-dimensional models in this class suggests that their critical behavior converges to directed percolation after very long time, questioning the existence of an independent Manna class. PMID:23031115
Percolation in insect nest networks: Evidence for optimal wiring
NASA Astrophysics Data System (ADS)
Valverde, Sergi; Corominas-Murtra, Bernat; Perna, Andrea; Kuntz, Pascale; Theraulaz, Guy; Solé, Ricard V.
2009-06-01
Optimization has been shown to be a driving force for the evolution of some biological structures, such as neural maps in the brain or transport networks. Here we show that insect networks also display characteristic traits of optimality. By using a graph representation of the chamber organization of termite nests and a disordered lattice model, it is found that these spatial nests are close to a percolation threshold. This suggests that termites build efficient systems of galleries spanning most of the nest volume at low cost. The evolutionary consequences are outlined.
Xie, Donghao; Ji, Ding-Kun; Zhang, Yue; Cao, Jun; Zheng, Hu; Liu, Lin; Zang, Yi; Li, Jia; Chen, Guo-Rong; James, Tony D; He, Xiao-Peng
2016-08-01
Here we demonstrate that 2D MoS2 can enhance the receptor-targeting and imaging ability of a fluorophore-labelled ligand. The 2D MoS2 has an enhanced working concentration range when compared with graphene oxide, resulting in the improved imaging of both cell and tissue samples. PMID:27378648
2D vs. 3D mammography observer study
NASA Astrophysics Data System (ADS)
Fernandez, James Reza F.; Hovanessian-Larsen, Linda; Liu, Brent
2011-03-01
Breast cancer is the most common type of non-skin cancer in women. 2D mammography is a screening tool to aid in the early detection of breast cancer, but has diagnostic limitations of overlapping tissues, especially in dense breasts. 3D mammography has the potential to improve detection outcomes by increasing specificity, and a new 3D screening tool with a 3D display for mammography aims to improve performance and efficiency as compared to 2D mammography. An observer study using a mammography phantom was performed to compare traditional 2D mammography with this ne 3D mammography technique. In comparing 3D and 2D mammography there was no difference in calcification detection, and mass detection was better in 2D as compared to 3D. There was a significant decrease in reading time for masses, calcifications, and normals in 3D compared to 2D, however, as well as more favorable confidence levels in reading normal cases. Given the limitations of the mammography phantom used, however, a clearer picture in comparing 3D and 2D mammography may be better acquired with the incorporation of human studies in the future.
Efficient 2D MRI relaxometry using compressed sensing
NASA Astrophysics Data System (ADS)
Bai, Ruiliang; Cloninger, Alexander; Czaja, Wojciech; Basser, Peter J.
2015-06-01
Potential applications of 2D relaxation spectrum NMR and MRI to characterize complex water dynamics (e.g., compartmental exchange) in biology and other disciplines have increased in recent years. However, the large amount of data and long MR acquisition times required for conventional 2D MR relaxometry limits its applicability for in vivo preclinical and clinical MRI. We present a new MR pipeline for 2D relaxometry that incorporates compressed sensing (CS) as a means to vastly reduce the amount of 2D relaxation data needed for material and tissue characterization without compromising data quality. Unlike the conventional CS reconstruction in the Fourier space (k-space), the proposed CS algorithm is directly applied onto the Laplace space (the joint 2D relaxation data) without compressing k-space to reduce the amount of data required for 2D relaxation spectra. This framework is validated using synthetic data, with NMR data acquired in a well-characterized urea/water phantom, and on fixed porcine spinal cord tissue. The quality of the CS-reconstructed spectra was comparable to that of the conventional 2D relaxation spectra, as assessed using global correlation, local contrast between peaks, peak amplitude and relaxation parameters, etc. This result brings this important type of contrast closer to being realized in preclinical, clinical, and other applications.
NKG2D receptor and its ligands in host defense
Lanier, Lewis L.
2015-01-01
NKG2D is an activating receptor expressed on the surface of natural killer (NK) cells, CD8+ T cells, and subsets of CD4+ T cells, iNKT cells, and γδ T cells. In humans NKG2D transmits signals by its association with the DAP10 adapter subunit and in mice alternatively spliced isoforms transmit signals either using DAP10 or DAP12 adapter subunits. Although NKG2D is encoded by a highly conserved gene (KLRK1) with limited polymorphism, the receptor recognizes an extensive repertoire of ligands, encoded by at least 8 genes in humans (MICA, MICB, RAET1E, RAET1G, RAET1H, RAET1I, RAET1L, and RAET1N), some with extensive allelic polymorphism. Expression of the NKG2D ligands is tightly regulated at the level of transcription, translation, and post-translation. In general healthy adult tissues do not express NKG2D glycoproteins on the cell surface, but these ligands can be induced by hyper-proliferation and transformation, as well as when cells are infected by pathogens. Thus, the NKG2D pathway serves a mechanism for the immune system to detect and eliminate cells that have undergone “stress”. Viruses and tumor cells have devised numerous strategies to evade detection by the NKG2D surveillance system and diversification of the NKG2D ligand genes likely has been driven by selective pressures imposed by pathogens. NKG2D provides an attractive target for therapeutics in the treatment of infectious diseases, cancer, and autoimmune diseases. PMID:26041808
2D constant-loss taper for mode conversion
NASA Astrophysics Data System (ADS)
Horth, Alexandre; Kashyap, Raman; Quitoriano, Nathaniel J.
2015-03-01
Proposed in this manuscript is a novel taper geometry, the constant-loss taper (CLT). This geometry is derived with 1D slabs of silicon embedded in silicon dioxide using coupled-mode theory (CMT). The efficiency of the CLT is compared to both linear and parabolic tapers using CMT and 2D finite-difference time-domain simulations. It is shown that over a short 2D, 4.45 μm long taper the CLT's mode conversion efficiency is ~90% which is 10% and 18% more efficient than a 2D parabolic or linear taper, respectively.
Recent advances in 2D materials for photocatalysis
NASA Astrophysics Data System (ADS)
Luo, Bin; Liu, Gang; Wang, Lianzhou
2016-03-01
Two-dimensional (2D) materials have attracted increasing attention for photocatalytic applications because of their unique thickness dependent physical and chemical properties. This review gives a brief overview of the recent developments concerning the chemical synthesis and structural design of 2D materials at the nanoscale and their applications in photocatalytic areas. In particular, recent progress on the emerging strategies for tailoring 2D material-based photocatalysts to improve their photo-activity including elemental doping, heterostructure design and functional architecture assembly is discussed.
Comparison of 2D and 3D gamma analyses
Pulliam, Kiley B.; Huang, Jessie Y.; Howell, Rebecca M.; Followill, David; Kry, Stephen F.; Bosca, Ryan; O’Daniel, Jennifer
2014-02-15
Purpose: As clinics begin to use 3D metrics for intensity-modulated radiation therapy (IMRT) quality assurance, it must be noted that these metrics will often produce results different from those produced by their 2D counterparts. 3D and 2D gamma analyses would be expected to produce different values, in part because of the different search space available. In the present investigation, the authors compared the results of 2D and 3D gamma analysis (where both datasets were generated in the same manner) for clinical treatment plans. Methods: Fifty IMRT plans were selected from the authors’ clinical database, and recalculated using Monte Carlo. Treatment planning system-calculated (“evaluated dose distributions”) and Monte Carlo-recalculated (“reference dose distributions”) dose distributions were compared using 2D and 3D gamma analysis. This analysis was performed using a variety of dose-difference (5%, 3%, 2%, and 1%) and distance-to-agreement (5, 3, 2, and 1 mm) acceptance criteria, low-dose thresholds (5%, 10%, and 15% of the prescription dose), and data grid sizes (1.0, 1.5, and 3.0 mm). Each comparison was evaluated to determine the average 2D and 3D gamma, lower 95th percentile gamma value, and percentage of pixels passing gamma. Results: The average gamma, lower 95th percentile gamma value, and percentage of passing pixels for each acceptance criterion demonstrated better agreement for 3D than for 2D analysis for every plan comparison. The average difference in the percentage of passing pixels between the 2D and 3D analyses with no low-dose threshold ranged from 0.9% to 2.1%. Similarly, using a low-dose threshold resulted in a difference between the mean 2D and 3D results, ranging from 0.8% to 1.5%. The authors observed no appreciable differences in gamma with changes in the data density (constant difference: 0.8% for 2D vs 3D). Conclusions: The authors found that 3D gamma analysis resulted in up to 2.9% more pixels passing than 2D analysis. It must
Materials for Flexible, Stretchable Electronics: Graphene and 2D Materials
NASA Astrophysics Data System (ADS)
Kim, Sang Jin; Choi, Kyoungjun; Lee, Bora; Kim, Yuna; Hong, Byung Hee
2015-07-01
Recently, 2D materials have been intensively studied as emerging materials for future electronics, including flexible electronics, photonics, and electrochemical energy storage devices. Among representative 2D materials (such as graphene, boron nitride, and transition metal dichalcogenides) that exhibit extraordinary properties, graphene stands out in the flexible electronics field due to its combination of high electron mobility, high thermal conductivity, high specific surface area, high optical transparency, excellent mechanical flexibility, and environmental stability. This review covers the synthesis, transfer, and characterization methods of graphene and 2D materials and graphene's application to flexible devices as well as comparison with other competing materials.
Agglomerative percolation on the Bethe lattice and the triangular cactus
NASA Astrophysics Data System (ADS)
Chae, Huiseung; Yook, Soon-Hyung; Kim, Yup
2013-08-01
Agglomerative percolation (AP) on the Bethe lattice and the triangular cactus is studied to establish the exact mean-field theory for AP. Using the self-consistent simulation method based on the exact self-consistent equations, the order parameter P∞ and the average cluster size S are measured. From the measured P∞ and S, the critical exponents βk and γk for k = 2 and 3 are evaluated. Here, βk and γk are the critical exponents for P∞ and S when the growth of clusters spontaneously breaks the Zk symmetry of the k-partite graph. The obtained values are β2 = 1.79(3), γ2 = 0.88(1), β3 = 1.35(5) and γ3 = 0.94(2). By comparing these exponents with those for ordinary percolation (β∞ = 1 and γ∞ = 1), we also find β∞ < β3 < β2 and γ∞ > γ3 > γ2. These results quantitatively verify the conjecture that the AP model belongs to a new universality class if the Zk symmetry is broken spontaneously, and the new universality class depends on k.
Neural networks, field theory, directed percolation, and critical branching
NASA Astrophysics Data System (ADS)
Buice, Michael A.
We describe the dynamics of neural activity using field-theoretic methods for non-equilibrium statistical processes. Using a Markov assumption, we introduce the "spike model". The spike model permits a characterization of both neural fluctuations and response, presenting a tractable way to extend the mean field (Wilson-Cowan) equations used in much of theoretical and computational neuroscience. We also demonstrate the formalism's application to the Cowan models, one of which is equivalent to the forest fire model with immune trees. We argue that neural activity under mild conditions exhibits a dynamical phase transition which is in the universality class of directed percolation (DP). Owing to the spatial extent of neural interactions, there is a region in which the critical behavior is that of a branching process before crossing over into the DP region, consistent with measurements in cortical slice preparations. From the perspective of theoretical neuroscience, a principal contribution of this work is the connection of the problem of non-linear, non-Gaussian systems with the problem of dealing with infrared singularities in field theory. This work suggests a general characterization of epilepsy as a manifestation of a directed percolation phase transition.
Rubber elasticity for percolation network consisting of Gaussian chains
NASA Astrophysics Data System (ADS)
Nishi, Kengo; Noguchi, Hiroshi; Sakai, Takamasa; Shibayama, Mitsuhiro
2015-11-01
A theory describing the elastic modulus for percolation networks of Gaussian chains on general lattices such as square and cubic lattices is proposed and its validity is examined with simulation and mechanical experiments on well-defined polymer networks. The theory was developed by generalizing the effective medium approximation (EMA) for Hookian spring network to Gaussian chain networks. From EMA theory, we found that the ratio of the elastic modulus at p, G to that at p = 1, G0, must be equal to G/G0 = (p - 2/f)/(1 - 2/f) if the position of sites can be determined so as to meet the force balance, where p is the degree of cross-linking reaction. However, the EMA prediction cannot be applicable near its percolation threshold because EMA is a mean field theory. Thus, we combine real-space renormalization and EMA and propose a theory called real-space renormalized EMA, i.e., REMA. The elastic modulus predicted by REMA is in excellent agreement with the results of simulations and experiments of near-ideal diamond lattice gels.
Rubber Elasticity for percolation network consisting of Gaussian Chains
NASA Astrophysics Data System (ADS)
Nishi, Kengo; Shibayama, Mitsuhiro; Sakai, Takamasa
A theory describing the elastic modulus for percolation networks of Gaussian chains on general lattices such as square and cubic lattices is proposed and its validity is examined with simulation and mechanical experiments on well-defined polymer networks. The theory was developed by generalizing the effective medium approximation for Hookian spring network (EMA) to Gaussian chain networks. From EMA theory, we found that the ratio of the elastic modulus at p, G to that at p = 1 ,G0, must be equal to G /G0 = (p - 2 / f) / (1 - 2 / f) if the position of sites can be determined so as to meet the force balance, where p is the degree of cross-linking reaction. However, the EMA prediction cannot be applicable near its percolation threshold because EMA is a mean field theory. Thus, we combine real-space renormalization and EMA, and propose a theory called real-space renormalized EMA, i.e., REMA. The elastic modulus predicted by REMA is in excellent agreement with the results of simulations and experiments of near-ideal diamond lattice gels.
Quantum walk coherences on a dynamical percolation graph
Elster, Fabian; Barkhofen, Sonja; Nitsche, Thomas; Novotný, Jaroslav; Gábris, Aurél; Jex, Igor; Silberhorn, Christine
2015-01-01
Coherent evolution governs the behaviour of all quantum systems, but in nature it is often subjected to influence of a classical environment. For analysing quantum transport phenomena quantum walks emerge as suitable model systems. In particular, quantum walks on percolation structures constitute an attractive platform for studying open system dynamics of random media. Here, we present an implementation of quantum walks differing from the previous experiments by achieving dynamical control of the underlying graph structure. We demonstrate the evolution of an optical time-multiplexed quantum walk over six double steps, revealing the intricate interplay between the internal and external degrees of freedom. The observation of clear non-Markovian signatures in the coin space testifies the high coherence of the implementation and the extraordinary degree of control of all system parameters. Our work is the proof-of-principle experiment of a quantum walk on a dynamical percolation graph, paving the way towards complex simulation of quantum transport in random media. PMID:26311434
Rubber elasticity for percolation network consisting of Gaussian chains
Nishi, Kengo E-mail: sakai@tetrapod.t.u-tokyo.ac.jp Noguchi, Hiroshi; Shibayama, Mitsuhiro E-mail: sakai@tetrapod.t.u-tokyo.ac.jp; Sakai, Takamasa E-mail: sakai@tetrapod.t.u-tokyo.ac.jp
2015-11-14
A theory describing the elastic modulus for percolation networks of Gaussian chains on general lattices such as square and cubic lattices is proposed and its validity is examined with simulation and mechanical experiments on well-defined polymer networks. The theory was developed by generalizing the effective medium approximation (EMA) for Hookian spring network to Gaussian chain networks. From EMA theory, we found that the ratio of the elastic modulus at p, G to that at p = 1, G{sub 0}, must be equal to G/G{sub 0} = (p − 2/f)/(1 − 2/f) if the position of sites can be determined so as to meet the force balance, where p is the degree of cross-linking reaction. However, the EMA prediction cannot be applicable near its percolation threshold because EMA is a mean field theory. Thus, we combine real-space renormalization and EMA and propose a theory called real-space renormalized EMA, i.e., REMA. The elastic modulus predicted by REMA is in excellent agreement with the results of simulations and experiments of near-ideal diamond lattice gels.
Accelerating Gas Adsorption on 3D Percolating Carbon Nanotubes
NASA Astrophysics Data System (ADS)
Li, Hui; Wen, Chenyu; Zhang, Youwei; Wu, Dongping; Zhang, Shi-Li; Qiu, Zhi-Jun
2016-02-01
In the field of electronic gas sensing, low-dimensional semiconductors such as single-walled carbon nanotubes (SWCNTs) can offer high detection sensitivity owing to their unprecedentedly large surface-to-volume ratio. The sensitivity and responsivity can further improve by increasing their areal density. Here, an accelerated gas adsorption is demonstrated by exploiting volumetric effects via dispersion of SWCNTs into a percolating three-dimensional (3D) network in a semiconducting polymer. The resultant semiconducting composite film is evaluated as a sensing membrane in field effect transistor (FET) sensors. In order to attain reproducible characteristics of the FET sensors, a pulsed-gate-bias measurement technique is adopted to eliminate current hysteresis and drift of sensing baseline. The rate of gas adsorption follows the Langmuir-type isotherm as a function of gas concentration and scales with film thickness. This rate is up to 5 times higher in the composite than only with an SWCNT network in the transistor channel, which in turn results in a 7-fold shorter time constant of adsorption with the composite. The description of gas adsorption developed in the present work is generic for all semiconductors and the demonstrated composite with 3D percolating SWCNTs dispersed in functional polymer represents a promising new type of material for advanced gas sensors.
High volumetric capacitance near the insulator-metal percolation transition
NASA Astrophysics Data System (ADS)
Efros, A. L.
2011-10-01
I propose a new type of capacitor with a very high volumetric capacitance. It is based on the known phenomenon of the sharp increase of the dielectric constant of a metal-insulator composite in the vicinity of the percolation threshold on the insulator side. The optimization suggests that the sizes of the metallic particles should fall within the nanoscale. The distance between planar electrodes should be somewhat larger than the correlation length of the percolation theory and ≈10-20 times larger than the size of the particles while the area of the electrodes could be unlimited. The random electric field in the capacitor is calculated and is shown to be larger than the average field corresponding to the potential difference of the electrodes. This random field is potentially responsible for the dielectric breakdown. The estimated breakdown voltage of the capacitor shows that the stored energy density might be significantly larger than that of electrolytic capacitors while the volumetric capacitances might be comparable. The charging and discharging times should be significantly smaller than the corresponding times of batteries and even electrolytic capacitors.
Accelerating Gas Adsorption on 3D Percolating Carbon Nanotubes
Li, Hui; Wen, Chenyu; Zhang, Youwei; Wu, Dongping; Zhang, Shi-Li; Qiu, Zhi-Jun
2016-01-01
In the field of electronic gas sensing, low-dimensional semiconductors such as single-walled carbon nanotubes (SWCNTs) can offer high detection sensitivity owing to their unprecedentedly large surface-to-volume ratio. The sensitivity and responsivity can further improve by increasing their areal density. Here, an accelerated gas adsorption is demonstrated by exploiting volumetric effects via dispersion of SWCNTs into a percolating three-dimensional (3D) network in a semiconducting polymer. The resultant semiconducting composite film is evaluated as a sensing membrane in field effect transistor (FET) sensors. In order to attain reproducible characteristics of the FET sensors, a pulsed-gate-bias measurement technique is adopted to eliminate current hysteresis and drift of sensing baseline. The rate of gas adsorption follows the Langmuir-type isotherm as a function of gas concentration and scales with film thickness. This rate is up to 5 times higher in the composite than only with an SWCNT network in the transistor channel, which in turn results in a 7-fold shorter time constant of adsorption with the composite. The description of gas adsorption developed in the present work is generic for all semiconductors and the demonstrated composite with 3D percolating SWCNTs dispersed in functional polymer represents a promising new type of material for advanced gas sensors. PMID:26888337
Ultralow percolation threshold in aerogel and cryogel templated composites.
Irin, Fahmida; Das, Sriya; Atore, Francis O; Green, Micah J
2013-09-10
We demonstrate a novel concept for preparing percolating composites with ultralow filler content by utilizing nanofiller-loaded aerogel and cryogels as a conductive template. This concept is investigated for several porous systems, including resorcinol-formaldehyde (RF), silica, and polyacrylamide (PAM) gels, and both graphene and carbon nanotubes are utilized as nanofiller. In each case, a stable, aqueous nanofiller dispersion is mixed with a sol-gel precursor and polymerized to form a hydrogel, which can then be converted to an aerogel by critical point drying or cryogel by freeze-drying. Epoxy resin is infused into the pores of the gels by capillary action without disrupting the monolithic structure. We show that conductive graphene/epoxy composites are formed with a very low graphene loading; a percolation threshold as low as 0.012 vol % is obtained for graphene-RF cryogel/epoxy composite. This is the lowest reported threshold of any graphene-based nanocomposites. Similar values are achieved in other aerogel and nanofiller systems, which demonstrates the versatility of this method. PMID:23927050
Percolation transition in dynamical traffic network with evolving critical bottlenecks
Li, Daqing; Fu, Bowen; Wang, Yunpeng; Lu, Guangquan; Berezin, Yehiel; Stanley, H. Eugene; Havlin, Shlomo
2015-01-01
A critical phenomenon is an intrinsic feature of traffic dynamics, during which transition between isolated local flows and global flows occurs. However, very little attention has been given to the question of how the local flows in the roads are organized collectively into a global city flow. Here we characterize this organization process of traffic as “traffic percolation,” where the giant cluster of local flows disintegrates when the second largest cluster reaches its maximum. We find in real-time data of city road traffic that global traffic is dynamically composed of clusters of local flows, which are connected by bottleneck links. This organization evolves during a day with different bottleneck links appearing in different hours, but similar in the same hours in different days. A small improvement of critical bottleneck roads is found to benefit significantly the global traffic, providing a method to improve city traffic with low cost. Our results may provide insights on the relation between traffic dynamics and percolation, which can be useful for efficient transportation, epidemic control, and emergency evacuation. PMID:25552558
Ultrasensitive photodetectors exploiting electrostatic trapping and percolation transport
Zhang, Yingjie; Hellebusch, Daniel J.; Bronstein, Noah D.; Ko, Changhyun; Ogletree, D. Frank; Salmeron, Miquel; Alivisatos, A. Paul
2016-01-01
The sensitivity of semiconductor photodetectors is limited by photocarrier recombination during the carrier transport process. We developed a new photoactive material that reduces recombination by physically separating hole and electron charge carriers. This material has a specific detectivity (the ability to detect small signals) of 5 × 1017 Jones, the highest reported in visible and infrared detectors at room temperature, and 4–5 orders of magnitude higher than that of commercial single-crystal silicon detectors. The material was fabricated by sintering chloride-capped CdTe nanocrystals into polycrystalline films, where Cl selectively segregates into grain boundaries acting as n-type dopants. Photogenerated electrons concentrate in and percolate along the grain boundaries—a network of energy valleys, while holes are confined in the grain interiors. This electrostatic field-assisted carrier separation and percolation mechanism enables an unprecedented photoconductive gain of 1010 e− per photon, and allows for effective control of the device response speed by active carrier quenching. PMID:27323904
Percolation theory and fragmentation measures in social networks
NASA Astrophysics Data System (ADS)
Chen, Yiping; Paul, Gerald; Cohen, Reuven; Havlin, Shlomo; Borgatti, Stephen P.; Liljeros, Fredrik; Eugene Stanley, H.
2007-05-01
We study the statistical properties of a recently proposed social networks measure of fragmentation F after removal of a fraction q of nodes or links from the network. The measure F is defined as the ratio of the number of pairs of nodes that are not connected in the fragmented network to the total number of pairs in the original fully connected network. We compare this measure with the one traditionally used in percolation theory, P∞, the fraction of nodes in the largest cluster relative to the total number of nodes. Using both analytical and numerical methods, we study Erdős-Rényi (ER) and scale-free (SF) networks under various node removal strategies. We find that for a network obtained after removal of a fraction q of nodes above criticality, P∞≈(1-F). For fixed P∞ and close to criticality, we show that 1-F better reflects the actual fragmentation. For a given P∞, 1-F has a broad distribution and thus one can improve significantly the fragmentation of the network. We also study and compare the fragmentation measure F and the percolation measure P∞ for a real national social network of workplaces linked by the households of the employees and find similar results.
Electron percolation in realistic models of carbon nanotube networks
NASA Astrophysics Data System (ADS)
Simoneau, Louis-Philippe; Villeneuve, Jérémie; Rochefort, Alain
2015-09-01
The influence of penetrable and curved carbon nanotubes (CNT) on the charge percolation in three-dimensional disordered CNT networks have been studied with Monte-Carlo simulations. By considering carbon nanotubes as solid objects but where the overlap between their electron cloud can be controlled, we observed that the structural characteristics of networks containing lower aspect ratio CNT are highly sensitive to the degree of penetration between crossed nanotubes. Following our efficient strategy to displace CNT to different positions to create more realistic statistical models, we conclude that the connectivity between objects increases with the hard-core/soft-shell radii ratio. In contrast, the presence of curved CNT in the random networks leads to an increasing percolation threshold and to a decreasing electrical conductivity at saturation. The waviness of CNT decreases the effective distance between the nanotube extremities, hence reducing their connectivity and degrading their electrical properties. We present the results of our simulation in terms of thickness of the CNT network from which simple structural parameters such as the volume fraction or the carbon nanotube density can be accurately evaluated with our more realistic models.
Rubber elasticity for percolation network consisting of Gaussian chains.
Nishi, Kengo; Noguchi, Hiroshi; Sakai, Takamasa; Shibayama, Mitsuhiro
2015-11-14
A theory describing the elastic modulus for percolation networks of Gaussian chains on general lattices such as square and cubic lattices is proposed and its validity is examined with simulation and mechanical experiments on well-defined polymer networks. The theory was developed by generalizing the effective medium approximation (EMA) for Hookian spring network to Gaussian chain networks. From EMA theory, we found that the ratio of the elastic modulus at p, G to that at p = 1, G0, must be equal to G/G0 = (p - 2/f)/(1 - 2/f) if the position of sites can be determined so as to meet the force balance, where p is the degree of cross-linking reaction. However, the EMA prediction cannot be applicable near its percolation threshold because EMA is a mean field theory. Thus, we combine real-space renormalization and EMA and propose a theory called real-space renormalized EMA, i.e., REMA. The elastic modulus predicted by REMA is in excellent agreement with the results of simulations and experiments of near-ideal diamond lattice gels. PMID:26567682
Percolation Thresholds in Angular Grain media: Drude Directed Infiltration
NASA Astrophysics Data System (ADS)
Priour, Donald
Pores in many realistic systems are not well delineated channels, but are void spaces among grains impermeable to charge or fluid flow which comprise the medium. Sparse grain concentrations lead to permeable systems, while concentrations in excess of a critical density block bulk fluid flow. We calculate percolation thresholds in porous materials made up of randomly placed (and oriented) disks, tetrahedrons, and cubes. To determine if randomly generated finite system samples are permeable, we deploy virtual tracer particles which are scattered (e.g. specularly) by collisions with impenetrable angular grains. We hasten the rate of exploration (which would otherwise scale as ncoll1 / 2 where ncoll is the number of collisions with grains if the tracers followed linear trajectories) by considering the tracer particles to be charged in conjunction with a randomly directed uniform electric field. As in the Drude treatment, where a succession of many scattering events leads to a constant drift velocity, tracer displacements on average grow linearly in ncoll. By averaging over many disorder realizations for a variety of systems sizes, we calculate the percolation threshold and critical exponent which characterize the phase transition.
Low-field Hall effect near the percolation threshold
NASA Astrophysics Data System (ADS)
Marianer, S.; Bergman, D. J.
1989-06-01
We use a random-resistor-network model to study the critical behavior of the low-field Hall constant in a three-dimensional (3D) metal-insulator composite near the percolation threshold. The transfer-matrix method, which was originally introduced for calculating conductivity, is generalized to be applicable to the calculation of the Hall constant and the magnetoresistance as well. We then use this generalized method to perform a renormalization-group calculation for a cubic random resistor network and two simulations of random resistor networks at the percolation threshold: one of cubes and the other of long (3D) strips. Fitting an expression RH~(p-pc)-g to the effective Hall constant RH of the network, we find a divergent Hall constant both from the renormalization-group calculation (g=0.625) and from the simulation of cubes (g=0.25), while the long-strips simulation yields one that is concentration independent, i.e., g=0.
Percolation transition in dynamical traffic network with evolving critical bottlenecks
NASA Astrophysics Data System (ADS)
Li, Daqing
A critical phenomenon is an intrinsic feature of traffic dynamics, during which transition between isolated local flows and global flows occurs. However, very little attention has been given to the question of how the local flows in the roads are organized collectively into a global city flow. Here we characterize this organization process of traffic as ``traffic percolation,'' where the giant cluster of local flows disintegrates when the second largest cluster reaches its maximum. We find in real-time data of city road traffic that global traffic is dynamically composed of clusters of local flows, which are connected by bottleneck links. This organization evolves during a day with different bottleneck links appearing in different hours, but similar in the same hours in different days. A small improvement of critical bottleneck roads is found to benefit significantly the global traffic, providing a method to improve city traffic with low cost. Our results may provide insights on the relation between traffic dynamics and percolation, which can be useful for efficient transportation, epidemic control, and emergency evacuation.
Percolation behavior of tritiated water into a soil packed bed
Honda, T.; Katayama, K.; Uehara, K.; Fukada, S.; Takeishi, T.
2015-03-15
A large amount of cooling water is used in a D-T fusion reactor. The cooling water will contain tritium with high concentration because tritium can permeate metal walls at high temperature easily. A development of tritium handling technology for confining tritiated water in the fusion facility is an important issue. In addition, it is also important to understand tritium behavior in environment assuming severe accidents. In this study, percolation experiments of tritiated water in soil packed bed were carried out and tritium behavior in soil was discussed. Six soil samples were collected in Hakozaki campus of Kyushu University. These particle densities were of the same degree as that of general soils and moisture contents were related to BET surface area. For two soil samples used in the percolation experiment of tritiated water, saturated hydraulic conductivity agreed well with the estimating value by Creager. Tritium retention ratio in the soil packed bed was larger than water retention. This is considered to be due to an effect of tritium sorption on the surface of soil particles. The isotope exchange capacity estimated by assuming that H/T ratio of supplied tritiated water and H/T ratio of surface water of soil particle was equal was comparable to that on cement paste and mortar which were obtained by exposure of tritiated water vapor. (authors)
Ultrasensitive photodetectors exploiting electrostatic trapping and percolation transport.
Zhang, Yingjie; Hellebusch, Daniel J; Bronstein, Noah D; Ko, Changhyun; Ogletree, D Frank; Salmeron, Miquel; Alivisatos, A Paul
2016-01-01
The sensitivity of semiconductor photodetectors is limited by photocarrier recombination during the carrier transport process. We developed a new photoactive material that reduces recombination by physically separating hole and electron charge carriers. This material has a specific detectivity (the ability to detect small signals) of 5 × 10(17) Jones, the highest reported in visible and infrared detectors at room temperature, and 4-5 orders of magnitude higher than that of commercial single-crystal silicon detectors. The material was fabricated by sintering chloride-capped CdTe nanocrystals into polycrystalline films, where Cl selectively segregates into grain boundaries acting as n-type dopants. Photogenerated electrons concentrate in and percolate along the grain boundaries-a network of energy valleys, while holes are confined in the grain interiors. This electrostatic field-assisted carrier separation and percolation mechanism enables an unprecedented photoconductive gain of 10(10) e(-) per photon, and allows for effective control of the device response speed by active carrier quenching. PMID:27323904
Electron percolation in realistic models of carbon nanotube networks
Simoneau, Louis-Philippe Villeneuve, Jérémie Rochefort, Alain
2015-09-28
The influence of penetrable and curved carbon nanotubes (CNT) on the charge percolation in three-dimensional disordered CNT networks have been studied with Monte-Carlo simulations. By considering carbon nanotubes as solid objects but where the overlap between their electron cloud can be controlled, we observed that the structural characteristics of networks containing lower aspect ratio CNT are highly sensitive to the degree of penetration between crossed nanotubes. Following our efficient strategy to displace CNT to different positions to create more realistic statistical models, we conclude that the connectivity between objects increases with the hard-core/soft-shell radii ratio. In contrast, the presence of curved CNT in the random networks leads to an increasing percolation threshold and to a decreasing electrical conductivity at saturation. The waviness of CNT decreases the effective distance between the nanotube extremities, hence reducing their connectivity and degrading their electrical properties. We present the results of our simulation in terms of thickness of the CNT network from which simple structural parameters such as the volume fraction or the carbon nanotube density can be accurately evaluated with our more realistic models.
Accelerating Gas Adsorption on 3D Percolating Carbon Nanotubes.
Li, Hui; Wen, Chenyu; Zhang, Youwei; Wu, Dongping; Zhang, Shi-Li; Qiu, Zhi-Jun
2016-01-01
In the field of electronic gas sensing, low-dimensional semiconductors such as single-walled carbon nanotubes (SWCNTs) can offer high detection sensitivity owing to their unprecedentedly large surface-to-volume ratio. The sensitivity and responsivity can further improve by increasing their areal density. Here, an accelerated gas adsorption is demonstrated by exploiting volumetric effects via dispersion of SWCNTs into a percolating three-dimensional (3D) network in a semiconducting polymer. The resultant semiconducting composite film is evaluated as a sensing membrane in field effect transistor (FET) sensors. In order to attain reproducible characteristics of the FET sensors, a pulsed-gate-bias measurement technique is adopted to eliminate current hysteresis and drift of sensing baseline. The rate of gas adsorption follows the Langmuir-type isotherm as a function of gas concentration and scales with film thickness. This rate is up to 5 times higher in the composite than only with an SWCNT network in the transistor channel, which in turn results in a 7-fold shorter time constant of adsorption with the composite. The description of gas adsorption developed in the present work is generic for all semiconductors and the demonstrated composite with 3D percolating SWCNTs dispersed in functional polymer represents a promising new type of material for advanced gas sensors. PMID:26888337
Short-range correlations in percolation at criticality
NASA Astrophysics Data System (ADS)
Hu, Hao; Blöte, Henk W. J.; Ziff, Robert M.; Deng, Youjin
2014-10-01
We derive the critical nearest-neighbor connectivity gn as 3/4, 3(7-9pctri)/4(5-4pctri), and 3(2+7pctri)/4(5-pctri) for bond percolation on the square, honeycomb, and triangular lattice, respectively, where pctri=2sin(π/18) is the percolation threshold for the triangular lattice, and confirm these values via Monte Carlo simulations. On the square lattice, we also numerically determine the critical next-nearest-neighbor connectivity as gnn=0.6875000(2), which confirms a conjecture by Mitra and Nienhuis [J. Stat. Mech. (2004) P10006, 10.1088/1742-5468/2004/10/P10006], implying the exact value gnn=11/16. We also determine the connectivity on a free surface as gnsurf=0.6250001(13) and conjecture that this value is exactly equal to 5/8. In addition, we find that at criticality, the connectivities depend on the linear finite size L as ˜Lyt-d, and the associated specific-heat-like quantities Cn and Cnn scale as ˜L2yt-dln(L /L0), where d is the lattice dimensionality, yt=1/ν the thermal renormalization exponent, and L0 a nonuniversal constant. We provide an explanation of this logarithmic factor within the theoretical framework reported recently by Vasseur et al. [J. Stat. Mech. (2012) L07001, 10.1088/1742-5468/2012/07/L07001].
Recent developments in 2D layered inorganic nanomaterials for sensing
NASA Astrophysics Data System (ADS)
Kannan, Padmanathan Karthick; Late, Dattatray J.; Morgan, Hywel; Rout, Chandra Sekhar
2015-08-01
Two dimensional layered inorganic nanomaterials (2D-LINs) have recently attracted huge interest because of their unique thickness dependent physical and chemical properties and potential technological applications. The properties of these layered materials can be tuned via both physical and chemical processes. Some 2D layered inorganic nanomaterials like MoS2, WS2 and SnS2 have been recently developed and employed in various applications, including new sensors because of their layer-dependent electrical properties. This article presents a comprehensive overview of recent developments in the application of 2D layered inorganic nanomaterials as sensors. Some of the salient features of 2D materials for different sensing applications are discussed, including gas sensing, electrochemical sensing, SERS and biosensing, SERS sensing and photodetection. The working principles of the sensors are also discussed together with examples.
2. D Street facade and rear (east) blank wall of ...
2. D Street facade and rear (east) blank wall of parking garage. Farther east is 408 8th Street (National Art And Frame Company). - PMI Parking Garage, 403-407 Ninth Street, Northwest, Washington, District of Columbia, DC
Collective excitations in 2D hard-disc fluid.
Huerta, Adrian; Bryk, Taras; Trokhymchuk, Andrij
2015-07-01
Collective dynamics of a two-dimensional (2D) hard-disc fluid was studied by molecular dynamics simulations in the range of packing fractions that covers states up to the freezing. Some striking features concerning collective excitations in this system were observed. In particular, the short-wavelength shear waves while being absent at low packing fractions were observed in the range of high packing fractions, just before the freezing transition in a 2D hard-disc fluid. In contrast, the so-called "positive sound dispersion" typically observed in dense Lennard-Jones-like fluids, was not detected for the 2D hard-disc fluid. The ratio of specific heats in the 2D hard-disc fluid shows a monotonic increase with density approaching the freezing, resembling in this way the similar behavior in the vicinity of the Widom line in the case of supercritical fluids. PMID:25595625
Alloyed 2D Metal-Semiconductor Atomic Layer Junctions.
Kim, Ah Ra; Kim, Yonghun; Nam, Jaewook; Chung, Hee-Suk; Kim, Dong Jae; Kwon, Jung-Dae; Park, Sang Won; Park, Jucheol; Choi, Sun Young; Lee, Byoung Hun; Park, Ji Hyeon; Lee, Kyu Hwan; Kim, Dong-Ho; Choi, Sung Mook; Ajayan, Pulickel M; Hahm, Myung Gwan; Cho, Byungjin
2016-03-01
Heterostructures of compositionally and electronically variant two-dimensional (2D) atomic layers are viable building blocks for ultrathin optoelectronic devices. We show that the composition of interfacial transition region between semiconducting WSe2 atomic layer channels and metallic NbSe2 contact layers can be engineered through interfacial doping with Nb atoms. WxNb1-xSe2 interfacial regions considerably lower the potential barrier height of the junction, significantly improving the performance of the corresponding WSe2-based field-effect transistor devices. The creation of such alloyed 2D junctions between dissimilar atomic layer domains could be the most important factor in controlling the electronic properties of 2D junctions and the design and fabrication of 2D atomic layer devices. PMID:26839956
Technical Review of the UNET2D Hydraulic Model
Perkins, William A.; Richmond, Marshall C.
2009-05-18
The Kansas City District of the US Army Corps of Engineers is engaged in a broad range of river management projects that require knowledge of spatially-varied hydraulic conditions such as velocities and water surface elevations. This information is needed to design new structures, improve existing operations, and assess aquatic habitat. Two-dimensional (2D) depth-averaged numerical hydraulic models are a common tool that can be used to provide velocity and depth information. Kansas City District is currently using a specific 2D model, UNET2D, that has been developed to meet the needs of their river engineering applications. This report documents a tech- nical review of UNET2D.
From weakly to strongly interacting 2D Fermi gases
NASA Astrophysics Data System (ADS)
Dyke, Paul; Fenech, Kristian; Lingham, Marcus; Peppler, Tyson; Hoinka, Sascha; Vale, Chris
2014-05-01
We study ultracold 2D Fermi gases of 6Li formed in a highly oblate trapping potential. The potential is generated by a cylindrically focused, blue detuned TEM01 mode laser beam. Weak magnetic field curvature provides highly harmonic confinement in the radial direction and we can readily produce single clouds with an aspect ratio of 230. Our experiments investigate the dimensional crossover from 3D to 2D for a two component Fermi gas in the Bose-Einstein Condensate to Bardeen Cooper Schrieffer crossover. Observation of an elbow in measurements of the cloud width vs. atom number is consistent with populating only the lowest transverse harmonic oscillator state for weak attractive interactions. This measurement is extended to the strongly interacting region using the broad Feshbach resonance at 832 G. We also report our progress towards measurement of the 2D equation of state for an interacting 2D Fermi gas via in-situ absorption imaging.
Chemical vapour deposition: Transition metal carbides go 2D
NASA Astrophysics Data System (ADS)
Gogotsi, Yury
2015-11-01
The unique properties of 2D materials, such as graphene or transition metal dichalcogenides, have been attracting much attention in the past decade. Now, metallically conductive and even superconducting transition metal carbides are entering the game.
Dominant 2D magnetic turbulence in the solar wind
NASA Technical Reports Server (NTRS)
Bieber, John W.; Wanner, Wolfgang; Matthaeus, William H.
1995-01-01
There have been recent suggestions that solar wind magnetic turbulence may be a composite of slab geometry (wavevector aligned with the mean magnetic field) and 2D geometry (wavevectors perpendicular to the mean field). We report results of two new tests of this hypothesis using Helios measurements of inertial ranged magnetic spectra in the solar wind. The first test is based upon a characteristic difference between perpendicular and parallel reduced power spectra which is expected for the 2D component but not for the slab component. The second test examines the dependence of power spectrum density upon the magnetic field angle (i.e., the angle between the mean magnetic field and the radial direction), a relationship which is expected to be in opposite directions for the slab and 2D components. Both tests support the presence of a dominant (approximately 85 percent by energy) 2D component in solar wind magnetic turbulence.
Dominant 2D magnetic turbulence in the solar wind
Bieber, John W.; Wanner, Wolfgang; Matthaeus, William H.
1996-07-20
There have been recent suggestions that solar wind magnetic turbulence may be a composite of slab geometry (wavevectors aligned with the mean magnetic field) and 2D geometry (wavevectors perpendicular to the mean field). We report results of two new tests of this hypothesis using Helios measurements of mid-inertial range magnetic spectra in the solar wind. The first test is based upon a characteristic difference between reduced magnetic power spectra in the two different directions perpendicular to the mean field. Such a difference is expected for 2D geometry but not for slab geometry. The second test examines the dependence of power spectrum density upon the magnetic field angle (i.e., the angle between the mean magnetic field and the radial direction), a relationship which is expected to be in opposite directions for the slab and 2D components. Both tests support the presence of a dominant ({approx}85% by energy) 2D component in solar wind magnetic turbulence.
Efficient framework for deformable 2D-3D registration
NASA Astrophysics Data System (ADS)
Fluck, Oliver; Aharon, Shmuel; Khamene, Ali
2008-03-01
Using 2D-3D registration it is possible to extract the body transformation between the coordinate systems of X-ray and volumetric CT images. Our initial motivation is the improvement of accuracy of external beam radiation therapy, an effective method for treating cancer, where CT data play a central role in radiation treatment planning. Rigid body transformation is used to compute the correct patient setup. The drawback of such approaches is that the rigidity assumption on the imaged object is not valid for most of the patient cases, mainly due to respiratory motion. In the present work, we address this limitation by proposing a flexible framework for deformable 2D-3D registration consisting of a learning phase incorporating 4D CT data sets and hardware accelerated free form DRR generation, 2D motion computation, and 2D-3D back projection.
Esophagectomy - minimally invasive
Minimally invasive esophagectomy; Robotic esophagectomy; Removal of the esophagus - minimally invasive; Achalasia - esophagectomy; Barrett esophagus - esophagectomy; Esophageal cancer - esophagectomy - laparoscopic; Cancer of the ...
Dang, Zhi-Min; Zheng, Ming-Sheng; Zha, Jun-Wei
2016-04-01
With the development of flexible electronic devices and large-scale energy storage technologies, functional polymer-matrix nanocomposites with high permittivity (high-k) are attracting more attention due to their ease of processing, flexibility, and low cost. The percolation effect is often used to explain the high-k characteristic of polymer composites when the conducting functional fillers are dispersed into polymers, which gives the polymer composite excellent flexibility due to the very low loading of fillers. Carbon nanotubes (CNTs) and graphene nanosheets (GNs), as one-dimensional (1D) and two-dimensional (2D) carbon nanomaterials respectively, have great potential for realizing flexible high-k dielectric nanocomposites. They are becoming more attractive for many fields, owing to their unique and excellent advantages. The progress in dielectric fields by using 1D/2D carbon nanomaterials as functional fillers in polymer composites is introduced, and the methods and mechanisms for improving dielectric properties, breakdown strength and energy storage density of their dielectric nanocomposites are examined. Achieving a uniform dispersion state of carbon nanomaterials and preventing the development of conductive networks in their polymer composites are the two main issues that still need to be solved in dielectric fields for power energy storage. Recent findings, current problems, and future perspectives are summarized. PMID:26865507
Computational Design of 2D materials for Energy Applications
NASA Astrophysics Data System (ADS)
Sun, Qiang
2015-03-01
Since the successful synthesis of graphene, tremendous efforts have been devoted to two-dimensional monolayers such as boron nitride (BN), silicene and MoS2. These 2D materials exhibit a large variety of physical and chemical properties with unprecedented applications. Here we report our recent studies of computational design of 2D materials for fuel cell applications which include hydrogen storage, CO2 capture, CO conversion and O2 reduction.
Generating a 2D Representation of a Complex Data Structure
NASA Technical Reports Server (NTRS)
James, Mark
2006-01-01
A computer program, designed to assist in the development and debugging of other software, generates a two-dimensional (2D) representation of a possibly complex n-dimensional (where n is an integer >2) data structure or abstract rank-n object in that other software. The nature of the 2D representation is such that it can be displayed on a non-graphical output device and distributed by non-graphical means.
Phylogenetic tree construction based on 2D graphical representation
NASA Astrophysics Data System (ADS)
Liao, Bo; Shan, Xinzhou; Zhu, Wen; Li, Renfa
2006-04-01
A new approach based on the two-dimensional (2D) graphical representation of the whole genome sequence [Bo Liao, Chem. Phys. Lett., 401(2005) 196.] is proposed to analyze the phylogenetic relationships of genomes. The evolutionary distances are obtained through measuring the differences among the 2D curves. The fuzzy theory is used to construct phylogenetic tree. The phylogenetic relationships of H5N1 avian influenza virus illustrate the utility of our approach.
Predicting Saturated Hydraulic Conductivity from Percolation Test Results in Layered Silt Loam Soils
Technology Transfer Automated Retrieval System (TEKTRAN)
The size of on-site waste disposal systems is usually determined by one or more percolation tests performed on the proposed site. The objectives of this study were to develop an empirical relationship between the saturated hydraulic conductivity (Ks) of layered soils and their percolation times (PT)...
NASA Astrophysics Data System (ADS)
Lu, Ming-Ming; Yuan, Jie; Wen, Bo; Liu, Jia; Cao, Wen-Qiang; Cao, Mao-Sheng
2013-03-01
We investigate the dielectric properties of multi-walled carbon nanotubes (MWCNTs) and graphite filling in SiO2 with the filling concentration of 2-20 wt.% in the frequency range of 102-107 Hz. MWCNTs and graphite have general electrical properties and percolation phenomena owing to their quasi-structure made up of graphene layers. Both permittivity ɛ and conductivity σ exhibit jumps around the percolation threshold. Variations of dielectric properties of the composites are in agreement with the percolation theory. All the percolation phenomena are determined by hopping and migrating electrons, which are attributed to the special electronic transport mechanism of the fillers in the composites. However, the twin-percolation phenomenon exists when the concentration of MWCNTs is between 5-10 wt.% and 15-20 wt.% in the MWCNTs/SiO2 composites, while in the graphite/SiO2 composites, there is only one percolation phenomenon in the graphite concentration of 10-15 wt.%. The unique twin-percolation phenomenon of MWCNTs/SiO2 is described and attributed to the electronic transfer mechanism, especially the network effect of MWCNTs in the composites. The network formation plays an essential role in determining the second percolation threshold of MWCNTs/SiO2.
Crossover phenomena of percolation transition in evolution networks with hybrid attachment.
Chen, Xiaolong; Yang, Chun; Zhong, Linfeng; Tang, Ming
2016-08-01
A first-order percolation transition, called explosive percolation, was recently discovered in evolution networks with random edge selection under a certain restriction. For many real world networks, the mechanism of preferential attachment plays a significant role in the formation of heterogeneous structures, but the network percolation in evolution process with preferential attachment has not yet been concerned. We propose a tunable network percolation model by introducing a hybrid mechanism of edge selection into the Bohman-Frieze-Wormald model, in which a parameter adjusts the relative weights between random and preferential selections. A large number of simulations indicate that there exist crossover phenomena of percolation transition by adjusting the parameter in the evolution processes. When the strategy of selecting a candidate edge is dominated by random selection, a single discontinuous percolation transition occurs. When a candidate edge is selected more preferentially based on nodes degree, the size of the largest component undergoes multiple discontinuous jumps, which exhibits a peculiar difference from the network percolation of random selection with a certain restriction. Besides, the percolation transition becomes continuous when the candidate edge is selected completely preferentially. PMID:27586610
NASA Astrophysics Data System (ADS)
Dages, Cecile; Samouelian, Anatja; Lanoix, Marthe; Dollinger, Jeanne; Chakkour, Sara; Chovelon, Gabrielle; Trabelsi, Khouloud; Voltz, Marc
2015-04-01
Ditches are involved in the transfer of pesticide to surface and groundwaters (e.g. Louchart et al., 2001). Soil horizons underlying ditch beds may present specific soil characteristics compared to neighbouring field soils due to erosion/deposition processes, to the specific biological activities (rooting dynamic and animal habitat) in the ditches (e.g. Vaughan et al., 2008) and to management practices (burning, dredging, mowing,...). Moreover, in contrast to percolation processes in field soils that can be assumed to be mainly 1D vertical, those occurring in the ditch beds are by essence 2D or even 3D. Nevertheless, due to a lake of knowledge, these specific aspects of transfer within ditch beds are generally omitted for hydrological simulation at the catchment scale (Mottes et al., 2014). Accordingly, the aims of this study were i) to characterize subsurface solute transfer through ditch beds and ii) to determine equivalent hydraulic parameters of the ditch beds for use in catchment scale hydrological simulations. A complementary aim was to evaluate the error in predictions performed when percolation in ditches is assumed to be similar to that in the neighbouring field soil. First, bromide transfer experiments were performed on undisturbed soil column (15 cm long with a 15 cm inner-diameter), horizontally and vertically sampled within each soil horizon underlying a ditch bed and within the neighboring field. Columns were sampled at the Roujan catchment (Hérault, France), which belongs to the long term Mediterranean hydrological observatory OMERE (Voltz and Albergel, 2002). Second, for each column, a set of parameters was determined by inverse optimization with mobile-immobile or dual permeability models, with CXTFIT (Toride et al., 1999) or with HYDRUS (Simunek et al., 1998). Third, infiltration and percolation in the ditch was simulated by a 2D flow domain approach considering the 2D variation in hydraulic properties of the cross section of a ditch bed. Last
Simulating MEMS Chevron Actuator for Strain Engineering 2D Materials
NASA Astrophysics Data System (ADS)
Vutukuru, Mounika; Christopher, Jason; Bishop, David; Swan, Anna
2D materials pose an exciting paradigm shift in the world of electronics. These crystalline materials have demonstrated high electric and thermal conductivities and tensile strength, showing great potential as the new building blocks of basic electronic circuits. However, strain engineering 2D materials for novel devices remains a difficult experimental feat. We propose the integration of 2D materials with MEMS devices to investigate the strain dependence on material properties such as electrical and thermal conductivity, refractive index, mechanical elasticity, and band gap. MEMS Chevron actuators, provides the most accessible framework to study strain in 2D materials due to their high output force displacements for low input power. Here, we simulate Chevron actuators on COMSOL to optimize actuator design parameters and accurately capture the behavior of the devices while under the external force of a 2D material. Through stationary state analysis, we analyze the response of the device through IV characteristics, displacement and temperature curves. We conclude that the simulation precisely models the real-world device through experimental confirmation, proving that the integration of 2D materials with MEMS is a viable option for constructing novel strain engineered devices. The authors acknowledge support from NSF DMR1411008.
Variation of the critical percolation threshold with the method of preparation of the system
NASA Astrophysics Data System (ADS)
Giazitzidis, Paraskevas; Avramov, Isak; Argyrakis, Panos
2015-12-01
In the present work we propose a model in which one may vary at will the critical threshold p c of the percolation transition, by probing one candidate site (or bond) at a time. This is realised by implementing an attractive (repulsive) rule when building up the lattice, so that newly added sites are either attracted or repelled by the already existing clusters. We use a tuning parameter k, which is the number of attempts for a site to be occupied, leading to a continuous change of the percolation threshold while the new percolation process still belongs to the same universality class as the ordinary random percolation. We find that by increasing the value of the tuning parameter k, p c decreases until it reaches a minimum value where nucleation effects are now more pronounced than the percolation process. Such results are useful for the explanation of several new experimental systems that have recently appeared.
Estimation of percolation flux from borehole temperature data at Yucca Mountain, Nevada.
Bodvarsson, G S; Kwicklis, E; Shan, C; Wu, Y S
2003-01-01
Temperature data from the unsaturated zone (UZ) at Yucca Mountain are analyzed to estimate percolation-flux rates and overall heat flux. A multilayer, one-dimensional analytical solution is presented for determining percolation flux from temperature data. Case studies have shown that the analytical solution agrees very well with results from the numerical code, TOUGH2. The results of the analysis yield percolation fluxes in the range from 0 to 20 mm/year for most of the deep boreholes. This range is in good agreement with the results of infiltration studies at Yucca Mountain. Percolation flux for the shallower boreholes, however, cannot be accurately determined from temperature data alone because large gas flow in the shallow system alters the temperature profiles. Percolation-flux estimates for boreholes located near or intersecting major faults are significantly higher than those for other boreholes. These estimates may be affected by gas flow in the faults. PMID:12714282
Schneider, D R S; Saraiva, A M; Azzoni, A R; Miranda, H R C A N; de Toledo, M A S; Pelloso, A C; Souza, A P
2010-11-01
The rice blast disease caused by the ascomycete Magnaporthe grisea continues to cause a tremendous impact in rice (Oryza sativa) cultures around the world. Elucidating the molecular basis of the fungus interactions with its host might help increase the general understanding of the pathogen-host relationship. At the moment of invasion, the fungus secretes effectors that modify host defenses and cellular processes as they successively invade living rice cells. PWL2, an effector protein, is a known AVR (avirulence) gene product. The PWL2 gene prevents the fungus from infecting weeping lovegrass (Eragrostis curvula). In this study, we identified a PWL2 allele gene (which we termed PWL2D) in a strain of M. grisea. The sequence of PWL2D has only two bases different from that of PWL2, producing alterations in residue 90 and residue 142. However, the alteration of residue 90 (from D(90) to N(90)) is critical to gene function. Here, we cloned the gene PWL2D in a pET System vector, expressed the gene product in Escherichia coli and evaluated by spectroscopic techniques some aspects of the PWL2D structure. While TRX-tagged PWL2D is prone to aggregation, the solubility of PWL2D is improved when it is overexpressed without its original signal peptide. Expression and purification procedures for these constructs are described. Finally, we found out that the protein seems to be an intrinsically disordered protein. Results from these studies will facilitate structural analysis of PWL2D and might contribute to understanding the gene's function and of fungal/plant interactions. PMID:20438845
Directed percolation phase transition to sustained turbulence in Couette flow
NASA Astrophysics Data System (ADS)
Lemoult, Grégoire; Shi, Liang; Avila, Kerstin; Jalikop, Shreyas V.; Avila, Marc; Hof, Björn
2016-03-01
Turbulence is one of the most frequently encountered non-equilibrium phenomena in nature, yet characterizing the transition that gives rise to turbulence in basic shear flows has remained an elusive task. Although, in recent studies, critical points marking the onset of sustained turbulence have been determined for several such flows, the physical nature of the transition could not be fully explained. In extensive experimental and computational studies we show for the example of Couette flow that the onset of turbulence is a second-order phase transition and falls into the directed percolation universality class. Consequently, the complex laminar-turbulent patterns distinctive for the onset of turbulence in shear flows result from short-range interactions of turbulent domains and are characterized by universal critical exponents. More generally, our study demonstrates that even high-dimensional systems far from equilibrium such as turbulence exhibit universality at onset and that here the collective dynamics obeys simple rules.
Percolation and Burgers' dynamics in a model of capillary formation
NASA Astrophysics Data System (ADS)
Coniglio, A.; de Candia, A.; di Talia, S.; Gamba, A.
2004-05-01
Capillary networks are essential in vertebrates to supply tissues with nutrients. Experiments of in vitro capillary formation show that cells randomly spread on a gel matrix autonomously organize to form vascular networks. Cells form disconnected networks at low densities and connected ones above a critical density. Above the critical density the network is characterized by a typical mesh size ˜200 μm , which is approximately constant on a wide range of density values. In this paper we present a full characterization of a recently proposed model which reproduces the main features of the biological system, focusing on its dynamical properties, on the fractal properties of patterns, and on the percolative phase transition. We discuss the relevance of the model in relation with some experiments in living beings and proposed diagnostic methods based on the measurement of the fractal dimension of vascular networks.
Percolation and permeability of fracture networks in Excavated Damaged Zones
NASA Astrophysics Data System (ADS)
Mourzenko, V.; Thovert, J.; Adler, P. M.
2012-12-01
Generally, the excavation process of a gallery generates fractures in its immediate vicinity. The corresponding zone which is called the Excavated Damaged Zone (EDZ), has a larger permeability than the intact surrounding medium. The properties of the EDZ are attracting more and more attention because of their potential importance in repositories of nuclear wastes. The EDZ which is induced by the excavation process may create along the galleries of the repositories a high permeability zone which could directly connect the storage area with the ground surface. Therefore, the studies of its properties are of crucial importance for applications such as the storage of nuclear wastes. Field observations (such as the ones which have been systematically performed at Mont Terri by [1, 2]) suggest that the fracture density is an exponentially decreasing function of the distance to the wall with a characteristic length of about 0.5 m and that the fracture orientation is anisotropic (most fractures are subparallel to the tunnel walls) and well approximated by a Fisher law whose pole is orthogonal to the wall. Numerical samples are generated according to these prescriptions. Their percolation status and hydraulic transmissivity can be calculated by the numerical codes which are detailed in [3]. Percolation is determined by a pseudo diffusion algorithm. Flow determination necessitates the meshing of the fracture networks and the discretisation of the Darcy equation by a finite volume technique; the resulting linear system is solved by a conjugate gradient algorithm. Only the flow properties of the EDZ along the directions which are parallel to the wall are of interest when a pressure gradient parallel to the wall is applied. The transmissivity T which relates the total flow rate per unit width Q along the wall through the whole EDZ to the pressure gradient grad p, is defined by Q = - T grad p/mu where mu is the fluid viscosity. The percolation status and hydraulic transmissivity
Process studies of water percolation in a Mediterranean karst area
NASA Astrophysics Data System (ADS)
Lange, J.; Arbel, Y.; Greenbaum, N.; Grodek, T.
2009-04-01
In drylands karst environments comprise large areas and their groundwater resources are important for local and regional water supply. Recharge estimations are usually based on long term averages and hence uncertain, because they do not explicitly account for the accentuated variability of dryland precipitation, where a large fraction of annual rainfall is concentrated in a small number of high magnitude events. To provide process information in adequate temporal resolution the present study directly investigates percolation processes in an Eastern Mediterranean karst system, Mt. Carmel, Israel. Therefore the drip response of stalactites in a karstic cave 28m below a sprinkling experiment was measured. Besides hydrometric measurements (soil moisture, surface runoff, stalactite dripping rates) also tracers were applied. Sprinkling water was pumped from two wells of the underlying karst aquifer. The experiment took place at the end of the dry season. Simulating a series of two high intensity storms, 190 mm of artificial rainfall was sprinkled over two days on a 143 m2 plot. Two types of tracers were used: (i) the relatively high conductivity of the sprinkling water facilitated the separation between old (pre-sprinkling) and new (sprinkling) water by mixing analysis, (ii) before second day sprinkling bromide was injected as a dirac impulse on top of selected soil pockets to facilitate direct insights into percolation fluxes. On the plot surface saturation excess runoff was observed towards the end of first day sprinkling and entire soil saturation occurred down to the deepest soil moisture sensor. During the second day the entire soil reached quickly saturation and remained at field capacity until the end of data collection. In the cave the drip response depended on stalactite type: (i) perennial stalactites were already dripping continuously before sprinkling onset. Conductivity dynamics resulted in high percentages of pre-sprinkling water suggesting continuous input
Round robin testing of a percolation column leaching procedure.
Geurts, Roeland; Spooren, Jeroen; Quaghebeur, Mieke; Broos, Kris; Kenis, Cindy; Debaene, Luc
2016-09-01
Round robin test results of a percolation column leaching procedure (CEN/TS 14405:2004), organised by the Flemish Institute for Technological Research (VITO), over a time span of 13years with a participation of between 8 and 18 different laboratories are presented and discussed. Focus is on the leachability of heavy metals As, Cd, Cr, Cu, Hg, Ni, Pb and Zn from mineral waste materials. By performing statistical analyses on the obtained results, insight into the reproducibility and repeatability of the column leaching test is gathered. A ratio of 1:3 between intra- and inter-laboratory variability is found. The reproducibility of the eluates' element concentrations differ significantly between elements, materials and fractions (i.e. different liquid-to-solid ratios). The reproducibility is discussed in light of the application of the column leaching test for legal and environmental policy purposes. In addition, the performances of laboratories are compared. PMID:27311350
Tuning and Freezing Disorder in Photonic Crystals using Percolation Lithography
NASA Astrophysics Data System (ADS)
Burgess, Ian B.; Abedzadeh, Navid; Kay, Theresa M.; Shneidman, Anna V.; Cranshaw, Derek J.; Lončar, Marko; Aizenberg, Joanna
2016-01-01
Although common in biological systems, synthetic self-assembly routes to complex 3D photonic structures with tailored degrees of disorder remain elusive. Here we show how liquids can be used to finely control disorder in porous 3D photonic crystals, leading to complex and hierarchical geometries. In these optofluidic crystals, dynamically tunable disorder is superimposed onto the periodic optical structure through partial wetting or evaporation. In both cases, macroscopic symmetry breaking is driven by subtle sub-wavelength variations in the pore geometry. These variations direct site-selective infiltration of liquids through capillary interactions. Incorporating cross-linkable resins into our liquids, we developed methods to freeze in place the filling patterns at arbitrary degrees of partial wetting and intermediate stages of drying. These percolation lithography techniques produced permanent photonic structures with adjustable disorder. By coupling strong changes in optical properties to subtle differences in fluid behavior, optofluidic crystals may also prove useful in rapid analysis of liquids.
Percolation effects in very-high-energy cosmic rays.
Dias de Deus, J; Santo, M C Espírito; Pimenta, M; Pajares, C
2006-04-28
Cosmic ray data at high energies present a number of well-known puzzles. At very high energies (E approximately 10(20) eV) there are indications of a discrepancy between ground array experiments and fluorescence detectors. On the other hand, the dependence of the depth of the shower maximum Xmax with the primary energy shows a change in slope (E approximately 10(17) eV) which is usually explained assuming a composition change. Both effects could be accounted for in models predicting that above a certain energy showers would develop deeper in the atmosphere. In this Letter we argue that this can be done naturally by including percolation effects in the description of the shower development, which cause a change in the behavior of the inelasticity K above E approximately 10(17) eV. PMID:16712214
Percolation Effects in Very-High-Energy Cosmic Rays
Dias de Deus, J.; Santo, M.C. Espirito; Pimenta, M.; Pajares, C.
2006-04-28
Cosmic ray data at high energies present a number of well-known puzzles. At very high energies (E{approx}10{sup 20} eV) there are indications of a discrepancy between ground array experiments and fluorescence detectors. On the other hand, the dependence of the depth of the shower maximum X{sub max} with the primary energy shows a change in slope (E{approx}10{sup 17} eV) which is usually explained assuming a composition change. Both effects could be accounted for in models predicting that above a certain energy showers would develop deeper in the atmosphere. In this Letter we argue that this can be done naturally by including percolation effects in the description of the shower development, which cause a change in the behavior of the inelasticity K above E{approx_equal}10{sup 17} eV.
Percolation, renormalization, and quantum computing with nondeterministic gates.
Kieling, K; Rudolph, T; Eisert, J
2007-09-28
We apply a notion of static renormalization to the preparation of entangled states for quantum computing, exploiting ideas from percolation theory. Such a strategy yields a novel way to cope with the randomness of nondeterministic quantum gates. This is most relevant in the context of optical architectures, where probabilistic gates are common, and cold atoms in optical lattices, where hole defects occur. We demonstrate how to efficiently construct cluster states without the need for rerouting, thereby avoiding a massive amount of conditional dynamics; we furthermore show that except for a single layer of gates during the preparation, all subsequent operations can be shifted to the final adapted single-qubit measurements. Remarkably, cluster state preparation is achieved using essentially the same scaling in resources as if deterministic gates were available. PMID:17930565
Percolation approach to glassy dynamics with continuously broken ergodicity
NASA Astrophysics Data System (ADS)
Arenzon, Jeferson J.; Coniglio, Antonio; Fierro, Annalisa; Sellitto, Mauro
2014-08-01
We show that the relaxation dynamics near a glass transition with continuous ergodicity breaking can be endowed with a geometric interpretation based on percolation theory. At the mean-field level this approach is consistent with the mode-coupling theory (MCT) of type-A liquid-glass transitions and allows one to disentangle the universal and nonuniversal contributions to MCT relaxation exponents. Scaling predictions for the time correlation function are successfully tested in the F12 schematic model and facilitated spin systems on a Bethe lattice. Our approach immediately suggests the extension of MCT scaling laws to finite spatial dimensions and yields predictions for dynamic relaxation exponents below an upper critical dimension of 6.
Experimental realization of directed percolation criticality in turbulent liquid crystals.
Takeuchi, Kazumasa A; Kuroda, Masafumi; Chaté, Hugues; Sano, Masaki
2009-11-01
This is a comprehensive report on the phase transition between two turbulent states of electroconvection in nematic liquid crystals, which was recently found by the authors to be in the directed percolation (DP) universality class [K. A. Takeuchi, Phys. Rev. Lett. 99, 234503 (2007)]. We further investigate both static and dynamic critical behaviors of this phase transition, measuring a total of 12 critical exponents, 5 scaling functions, and 8 scaling relations, all in full agreement with those characterizing the DP class in 2+1 dimensions. Developing an experimental technique to create a seed of topological-defect turbulence by pulse laser, we confirm in particular the rapidity symmetry, which is a basic but nontrivial consequence of the field-theoretic approach to DP. This provides a clear experimental realization of this outstanding truly out-of-equilibrium universality class, dominating most phase transitions into an absorbing state. PMID:20364956
Percolation-based precursors of transitions in dynamical systems
NASA Astrophysics Data System (ADS)
Rodriguez Mendez, Victor Manuel; Eguiluz, Victor M.; Ramasco, Jose J.; Hernandez-Garcia, Emilio
2015-04-01
Transitions in complex dynamical systems are ubiquitous in nature. Finding leading indicators in such systems is a fundamental task in many areas of science, such as financial markets, the extinction of species or climate change studies. Here we propose a new framework to study systems close to a bifurcation point by analyzing topological properties, based on clusters and percolation, of functional networks defined from the time series. The use of networks allows us for a global parametrization of the system going far beyond simple two-point relations (classical correlations). The generality and versatility of the cluster-based method to forecast transitions is shown in two different kinds of data. In one hand, three theoretical dynamical systems displaying very different transitions and crossovers were used as a test bed. On the other hand, we have used the field of surface air temperature in the NINO 3.4 zone. In this new approach, critical transitions are identified before they occur.
Immunization strategy based on the critical node in percolation transition
NASA Astrophysics Data System (ADS)
Liu, Yang; Wei, Bo; Wang, Zhen; Deng, Yong
2015-11-01
The problem of finding a better immunization strategy for controlling the spreading of the epidemic with limited resources has attracted much attention since its great theoretical significance and wide application. In this letter, we propose a novel and successful targeted immunization strategy based on percolation transition. Our strategy repeatedly looks for the critical nodes for immunizing. The critical node, which leads to the emergence of the giant connected component as the degree threshold increases, is determined when the maximal second-largest connected component disappears. To test the effectiveness of the proposed method, we conduct the experiments on several artificial networks and real-world networks. The results show that the proposed method outperforms the degree centrality strategy, the betweenness centrality strategy and the adaptive degree centrality strategy with 18% to 50% fewer immunized nodes for same amount of immunization.
Percolation analysis of a disordered spinor Bose gas
NASA Astrophysics Data System (ADS)
Nabi, Sk Noor; Basu, Saurabh
2016-06-01
We study the effects of an on-site disorder potential in a gas of spinor (spin-1) ultracold atoms loaded in an optical lattice corresponding to both ferromagnetic and antiferromagnetic spin-dependent interactions. Starting with a disordered spinor Bose–Hubbard model (SBHM) on a two-dimensional square lattice, we observe the appearance of a Bose glass phase using the fraction of the lattice sites having finite superfluid order parameter and non integer local densities as an indicator. A precise distinction between three different types of phases namely, superfluid, Mott insulator and Bose glass is done via a percolation analysis thereby demonstrating that a reliable enumeration of phases is possible at particular values of the parameters of the SBHM. Finally, we present the phase diagram based on the above information for both antiferromagnetic and ferromagnetic interactions.
Jamming vs Caging in Three Dimensional Jamming Percolation
NASA Astrophysics Data System (ADS)
Shokef, Yair; Segall, Nimrod; Teomy, Eial
We study a three-dimensional kinetically-constrained lattice-gas model, in which the ability of a particle to move depends on the occupation of neighboring sites in an orientational manner. The kinetic rules are constructed such that chains of permanently-frozen particles reach an infinite length at the critical density of directed percolation. Thus at this critical density the system undergoes a jamming transition, above which there is a finite fraction of jammed particles. We demonstrate that the three-dimensional mesh-like structure of the one-dimensional jammed chains enables the free particles to propagate through the holes in this mesh. This diffusive motion is terminated at a second critical density above which all particles are caged. The largest and second largest clusters of dynamically-connected sites exhibit singularities at both densities. Thus our model assists in separating between the two distinct phenomena of jamming and caging.