NASA Astrophysics Data System (ADS)
Farsi, Mohammad; Ghadimi, Parviz
2014-09-01
Main aim of this paper is to find the best combination of numerical schemes for 2-D SPH simulation of wedge water entry. Diffusion term is considered as laminar, turbulent, and artificial viscosity. Density filter that seriously affects the pressure distribution is investigated by adopting no filter, first order filter, and second order filter. Validation of the results indicates that turbulent model and first order density filter can lead to more reasonable solutions. This simulation was then conducted for wedge water entry with wide range of deadrise angles including 10 degrees, 20 degrees, 30 degrees, 45 degrees, 60 degrees and 81 degrees, with extreme deadrise angles of 10 degrees, 60 degrees and 81 degrees being considered. Comparison of SPH results with BEM solutions has displayed favorable agreement. In two particular cases where experimental data are available, the SPH results are shown to be closer to the experiments than BEM solution. While, accuracy of the obtained results for moderate deadrise angles is desirable, numerical findings for very small or very large deadrise angles are also very reasonable
gpuSPHASE-A shared memory caching implementation for 2D SPH using CUDA
NASA Astrophysics Data System (ADS)
Winkler, Daniel; Meister, Michael; Rezavand, Massoud; Rauch, Wolfgang
2017-04-01
Smoothed particle hydrodynamics (SPH) is a meshless Lagrangian method that has been successfully applied to computational fluid dynamics (CFD), solid mechanics and many other multi-physics problems. Using the method to solve transport phenomena in process engineering requires the simulation of several days to weeks of physical time. Based on the high computational demand of CFD such simulations in 3D need a computation time of years so that a reduction to a 2D domain is inevitable. In this paper gpuSPHASE, a new open-source 2D SPH solver implementation for graphics devices, is developed. It is optimized for simulations that must be executed with thousands of frames per second to be computed in reasonable time. A novel caching algorithm for Compute Unified Device Architecture (CUDA) shared memory is proposed and implemented. The software is validated and the performance is evaluated for the well established dambreak test case.
An improved SPH scheme for cosmological simulations
NASA Astrophysics Data System (ADS)
Beck, A. M.; Murante, G.; Arth, A.; Remus, R.-S.; Teklu, A. F.; Donnert, J. M. F.; Planelles, S.; Beck, M. C.; Förster, P.; Imgrund, M.; Dolag, K.; Borgani, S.
2016-01-01
We present an implementation of smoothed particle hydrodynamics (SPH) with improved accuracy for simulations of galaxies and the large-scale structure. In particular, we implement and test a vast majority of SPH improvement in the developer version of GADGET-3. We use the Wendland kernel functions, a particle wake-up time-step limiting mechanism and a time-dependent scheme for artificial viscosity including high-order gradient computation and shear flow limiter. Additionally, we include a novel prescription for time-dependent artificial conduction, which corrects for gravitationally induced pressure gradients and improves the SPH performance in capturing the development of gas-dynamical instabilities. We extensively test our new implementation in a wide range of hydrodynamical standard tests including weak and strong shocks as well as shear flows, turbulent spectra, gas mixing, hydrostatic equilibria and self-gravitating gas clouds. We jointly employ all modifications; however, when necessary we study the performance of individual code modules. We approximate hydrodynamical states more accurately and with significantly less noise than standard GADGET-SPH. Furthermore, the new implementation promotes the mixing of entropy between different fluid phases, also within cosmological simulations. Finally, we study the performance of the hydrodynamical solver in the context of radiative galaxy formation and non-radiative galaxy cluster formation. We find galactic discs to be colder and more extended and galaxy clusters showing entropy cores instead of steadily declining entropy profiles. In summary, we demonstrate that our improved SPH implementation overcomes most of the undesirable limitations of standard GADGET-SPH, thus becoming the core of an efficient code for large cosmological simulations.
SPH simulations of high-speed collisions
NASA Astrophysics Data System (ADS)
Rozehnal, Jakub; Broz, Miroslav
2016-10-01
Our work is devoted to a comparison of: i) asteroid-asteroid collisions occurring at lower velocities (about 5 km/s in the Main Belt), and ii) mutual collisions of asteroids and cometary nuclei usually occurring at significantly higher relative velocities (> 10 km/s).We focus on differences in the propagation of the shock wave, ejection of the fragments and possible differences in the resultingsize-frequency distributions of synthetic asteroid families. We also discuss scaling with respect to the "nominal" target diameter D = 100 km, projectile velocity 3-7 km/s, for which a number of simulations were done so far (Durda et al. 2007, Benavidez et al. 2012).In the latter case of asteroid-comet collisions, we simulate the impacts of brittle or pre-damaged impactors onto solid monolithic targets at high velocities, ranging from 10 to 15 km/s. The purpose of this numerical experiment is to better understand impact processes shaping the early Solar System, namely the primordial asteroid belt during during the (late) heavy bombardment (as a continuation of Broz et al. 2013).For all hydrodynamical simulations we use a smoothed-particle hydrodynamics method (SPH), namely the lagrangian SPH3D code (Benz & Asphaug 1994, 1995). The gravitational interactions between fragments (re-accumulation) is simulated with the Pkdgrav tree-code (Richardson et al. 2000).
Water Flow Simulation using Smoothed Particle Hydrodynamics (SPH)
NASA Technical Reports Server (NTRS)
Vu, Bruce; Berg, Jared; Harris, Michael F.
2014-01-01
Simulation of water flow from the rainbird nozzles has been accomplished using the Smoothed Particle Hydrodynamics (SPH). The advantage of using SPH is that no meshing is required, thus the grid quality is no longer an issue and accuracy can be improved.
RAM simulation model for SPH/RSV systems
Schryver, J.C.; Primm, A.H.; Nelson, S.C.
1995-12-31
The US Army`s Project Manager, Crusader is sponsoring the development of technologies that apply to the Self-Propelled Howitzer (SPH), formerly the Advanced Field Artillery System (AFAS), and Resupply Vehicle (RSV), formerly the Future Armored Resupply Vehicle (FARV), weapon system. Oak Ridge National Laboratory (ORNL) is currently performing developmental work in support of the SPH/PSV Crusader system. Supportive analyses of reliability, availability, and maintainability (RAM) aspects were also performed for the SPH/RSV effort. During FY 1994 and FY 1995 OPNL conducted a feasibility study to demonstrate the application of simulation modeling for RAM analysis of the Crusader system. Following completion of the feasibility study, a full-scale RAM simulation model of the Crusader system was developed for both the SPH and PSV. This report provides documentation for the simulation model as well as instructions in the proper execution and utilization of the model for the conduct of RAM analyses.
Numerical Simulation of Interacting Stellar Winds Model Using Smoothed Particle Hydrodynamics (SPH)
NASA Astrophysics Data System (ADS)
Thronson, H. A., Jr.; Li, P. S.; Kwok, S.
1997-12-01
In the past decade, the Interacting Stellar Winds (ISW) model has been shown to be successful in explaining the formation of planetary nebulae, Wolf-Rayet nebulae, slow novae, and supernovae. Since analytical methods applied to the ISW model have been limited to the spherical symmetric (1D) geometry, numerical methods are necessary for axisymmetric (2D) or arbitrary (3D) geometries, such as the study of formation and evolution of planetary nebulae, and for symbiotic nova outbursts. The Smoothed Particle Hydrodynamics (SPH) algorithm has been developed to study hydrodynamics using the particle method. This algorithm has been applied in many different fields successfully. In this paper, we apply the SPH algorithm using the TREE code to the problem of interacting winds dynamics. We present three simulations: (1) the interaction of two winds in spherical symmetry to demonstrate the validity of the algorithm in dealing with ISW modeling, (2) the formation and evolution of an axisymmetric nebula in the first 500 years, and (3) the interacting-colliding winds caused by a slow nova outburst in a symbiotic system. It is the first time that the SPH algorithm has been applied to an ISW simulation. The SPH algorithm is proved to be an accurate and powerful tool in studying ISW model. This work is supported by NASA's US ISO program and the University of Calgary.
Splotch: Ray Tracer to Visualize SPH Simulations
NASA Astrophysics Data System (ADS)
Dolag, Klaus; Reinecke, Martin; Gheller, Claudio; Rivi, Marzia; Krokos, Mel; Jin, Zhefan
2011-03-01
Splotch is a light and fast, publicly available, ray-tracer software tool which supports the effective visualization of cosmological simulations data. The algorithm it relies on is designed to deal with point-like data, optimizing the ray-tracing calculation by ordering the particles as a function of their 'depth', defined as a function of one of the coordinates or other associated parameters. Realistic three-dimensional impressions are reached through a composition of the final colour in each pixel properly calculating emission and absorption of individual volume elements.
SPH simulations of structures in protoplanetary disks
NASA Astrophysics Data System (ADS)
Demidova, T. V.; Grinin, V. P.
2017-02-01
Using the GADGET-2 code modified by us, we have computed hydrodynamic models of a protoplanetary disk perturbed by a low-mass companion. We have considered the cases of circular and eccentric orbits coplanar with the disk and inclined relative to its midplane. During our simulations we computed the column density of test particles on the line of sight between the central star and observer. On this basis we computed the column density of circumstellar dust by assuming the dust and gas to be well mixed with a mass ratio of 1: 100. To study the influence of the disk orientation relative to the observer on the interstellar extinction, we performed our computations for four inclinations of the line of sight to the disk plane and eight azimuthal directions. The column densities in the circumstellar disk of the central star and the circumbinary disk were computed separately. Our computations have shown that periodic column density oscillations can arise in both inner and circumbinary disks. The amplitude and shape of these oscillations depend on the system's parameters (the orbital eccentricity and inclination, the component mass ratio) and its orientation in space. The results of our simulations can be used to explain the cyclic brightness variations of young UX Ori stars.
SPH simulations of impacts on rubble pile asteroids
NASA Astrophysics Data System (ADS)
Deller, J.; Lowry, S.; Price, M. C.; Sierks, H.; Snodgrass, C.
2013-09-01
Many rubble pile asteroids with low bulk densities, like Itokawa, must include a high level of macroporosity, probably more than 40% [1]. Although little is known about their internal structure, numerical simulations of impact events on these rubble pile asteroids rely on assumptions on how the voids are distributed. While most hydrocodes do not distinguish between microand macroporosity, Benavidez et al. [2] introduced a rubble pile model where the asteroid is represented as a spherical target shell filled with an uneven distribution of basalt spheres ranging in radius from 8% to 20% of the asteroid's radius. In this study, we present a new approach to create rubble pile simulants for the use in impact simulations and quantify the dependence of impact outcomes on the internal structure of the target. The formation of the asteroid is modelled as a gravitational aggregation of spherical 'pebbles', that form the building blocks of our target. This aggregate is then converted into a high-resolution Smoothed Particle Hydrodynamics (SPH) model, which also accounts for macroporosity inside the pebbles'. To simulate high-velocity impacts on these models, we use the SPH solver in the code Autodyn. We will compare impact event outcomes for a large set of internal configurations to explore the parameter space of our model-building process. The analysis of the fragment size distribution and the disruption threshold will quantify the specific influence of each set-up parameter. This work is ongoing and we will present preliminary results at the meeting.
An improved sink particle algorithm for SPH simulations
NASA Astrophysics Data System (ADS)
Hubber, D. A.; Walch, S.; Whitworth, A. P.
2013-04-01
Numerical simulations of star formation frequently rely on the implementation of sink particles: (a) to avoid expending computational resource on the detailed internal physics of individual collapsing protostars, (b) to derive mass functions, binary statistics and clustering kinematics (and hence to make comparisons with observation), and (c) to model radiative and mechanical feedback; sink particles are also used in other contexts, for example to represent accreting black holes in galactic nuclei. We present a new algorithm for creating and evolving sink particles in smoothed particle hydrodynamic (SPH) simulations, which appears to represent a significant improvement over existing algorithms - particularly in situations where sinks are introduced after the gas has become optically thick to its own cooling radiation and started to heat up by adiabatic compression. (i) It avoids spurious creation of sinks. (ii) It regulates the accretion of matter on to a sink so as to mitigate non-physical perturbations in the vicinity of the sink. (iii) Sinks accrete matter, but the associated angular momentum is transferred back to the surrounding medium. With the new algorithm - and modulo the need to invoke sufficient resolution to capture the physics preceding sink formation - the properties of sinks formed in simulations are essentially independent of the user-defined parameters of sink creation, or the number of SPH particles used.
Gas stripping in galaxy clusters: a new SPH simulation approach
NASA Astrophysics Data System (ADS)
Jáchym, P.; Palouš, J.; Köppen, J.; Combes, F.
2007-09-01
Aims:The influence of a time-varying ram pressure on spiral galaxies in clusters is explored with a new simulation method based on the N-body SPH/tree code GADGET. Methods: We have adapted the code to describe the interaction of two different gas phases, the diffuse hot intracluster medium (ICM) and the denser and colder interstellar medium (ISM). Both the ICM and ISM components are introduced as SPH particles. As a galaxy arrives on a highly radial orbit from outskirts to cluster center, it crosses the ICM density peak and experiences a time-varying wind. Results: Depending on the duration and intensity of the ISM-ICM interaction, early and late type galaxies in galaxy clusters with either a large or small ICM distribution are found to show different stripping efficiencies, amounts of reaccretion of the extra-planar ISM, and final masses. We compare the numerical results with analytical approximations of different complexity and indicate the limits of the Gunn & Gott simple stripping formula. Conclusions: Our investigations emphasize the role of the galactic orbital history to the stripping amount. We discuss the contribution of ram pressure stripping to the origin of the ICM and its metallicity. We propose gas accumulations like tails, filaments, or ripples to be responsible for stripping in regions with low overall ICM occurrence. Appendix A is only available in electronic form at http://www.aanda.org
Consistent SPH Simulations of Protostellar Collapse and Fragmentation
NASA Astrophysics Data System (ADS)
Gabbasov, Ruslan; Sigalotti, Leonardo Di G.; Cruz, Fidel; Klapp, Jaime; Ramírez-Velasquez, José M.
2017-02-01
We study the consistency and convergence of smoothed particle hydrodynamics (SPH) as a function of the interpolation parameters, namely the number of particles N, the number of neighbors n, and the smoothing length h, using simulations of the collapse and fragmentation of protostellar rotating cores. The calculations are made using a modified version of the GADGET-2 code that employs an improved scheme for the artificial viscosity and power-law dependences of n and h on N, as was recently proposed by Zhu et al., which comply with the combined limit N\\to ∞ , h\\to 0, and n\\to ∞ with n/N\\to 0 for full SPH consistency as the domain resolution is increased. We apply this realization to the “standard isothermal test case” in the variant calculated by Burkert & Bodenheimer and the Gaussian cloud model of Boss to investigate the response of the method to adaptive smoothing lengths in the presence of large density and pressure gradients. The degree of consistency is measured by tracking how well the estimates of the consistency integral relations reproduce their continuous counterparts. In particular, C 0 and C 1 particle consistency is demonstrated, meaning that the calculations are close to second-order accuracy. As long as n is increased with N, mass resolution also improves as the minimum resolvable mass {M}\\min ∼ {n}-1. This aspect allows proper calculation of small-scale structures in the flow associated with the formation and instability of protostellar disks around the growing fragments, which are seen to develop a spiral structure and fragment into close binary/multiple systems as supported by recent observations.
SPH Simulation of Impact of a Surge on a Wall
NASA Astrophysics Data System (ADS)
Diwakar, Manoj Kumar; Mohapatra, Pranab Kumar; Tripathi, Shivam
2014-05-01
Structures located on the downstream of a dam are prone to impact of the surge due to dam break flow. Ramsden (1996) experimentally studied the run-up height on a vertical wall due to propagation of bore and surge on dry bed and measured their impact on the wall. Mohapatra et al. (2000) applied Navier Stokes equations to numerically study the impact of bore on vertical and inclined walls. They also obtained the evolution of surge on dry bed. In the present work, the impact of a surge wave due to dam break flow against the wall is modeled with a two-dimensional smoothed particle hydrodynamics (SPH) model. SPH is a mesh-free method that relies on the particle view of the field problem and approximates the continuity and momentum equations on a set of particles. The method solves the strong form of Navier-Stokes equations. The governing equations are solved numerically in the vertical plane. The propagation of the surge wave, its impact and the maximum run-up on the wall located at the boundary are analyzed. Surface profile, velocity field and pressure distributions are simulated. Non-dimensional run-up height obtained from the present numerical model is 0.86 and is in good agreement with the available experimental data of Ramsden (1996) which is in the range of 0.75-0.9. Also, the simulated profile of the surge tip was comparable to the empirical equations refereed in Ramsden (1996). The model is applied to the study the maximum force and the run-up height on inclined walls with different inclinations. The results indicate that the maximum force and the run-up height on the wall increase with the increment of wall inclination. Comparison of numerical results with analytical solutions derived from shallow water equations clearly shows the breakdown of shallow water assumption during the impact. In addition to these results, the numerical simulation yields the complete velocity and pressure ?elds which may be used to design structures located in the path of a dam
SPH Simulations on Triggered Star Formation in Brc IC 1848
NASA Astrophysics Data System (ADS)
Miao, Jingqi; Thompson, Mark; Morgan, Larry; White, Glenn
SPH simulations have been carried out in the study of three bright-rimmed clouds (SFO 11 SFO 11NE and SFO 11E) associated with the HII region IC1848 in order to explore the possibility of star formation in these cloud structures trace back the likely past and future evolution of these clouds and explain what we observed in a recent star formation census of SFO BRCs. In our modelling we include both the effect of an ionising radiation field and self-gravitational collapse also a larger chemical network refined chemical and dust properties the calculation of the molecule lines. The influence of the magnetic field and chaotic motion of the molecular clouds are included as well. Therefore our upgraded model could present relatively complete evolutionary pictures of molecule clouds under the consideration. The results from our simulations exhibit the radial striations for a photoevaporated flow of gas from the clouds surface and shows the signals of star formation within all three clouds cores which have the same physical properties as protostellar core also some outflows are appearing in one of the structures which are in good agreement with observational pictures.
Realistic and efficient 2D crack simulation
NASA Astrophysics Data System (ADS)
Yadegar, Jacob; Liu, Xiaoqing; Singh, Abhishek
2010-04-01
Although numerical algorithms for 2D crack simulation have been studied in Modeling and Simulation (M&S) and computer graphics for decades, realism and computational efficiency are still major challenges. In this paper, we introduce a high-fidelity, scalable, adaptive and efficient/runtime 2D crack/fracture simulation system by applying the mathematically elegant Peano-Cesaro triangular meshing/remeshing technique to model the generation of shards/fragments. The recursive fractal sweep associated with the Peano-Cesaro triangulation provides efficient local multi-resolution refinement to any level-of-detail. The generated binary decomposition tree also provides efficient neighbor retrieval mechanism used for mesh element splitting and merging with minimal memory requirements essential for realistic 2D fragment formation. Upon load impact/contact/penetration, a number of factors including impact angle, impact energy, and material properties are all taken into account to produce the criteria of crack initialization, propagation, and termination leading to realistic fractal-like rubble/fragments formation. The aforementioned parameters are used as variables of probabilistic models of cracks/shards formation, making the proposed solution highly adaptive by allowing machine learning mechanisms learn the optimal values for the variables/parameters based on prior benchmark data generated by off-line physics based simulation solutions that produce accurate fractures/shards though at highly non-real time paste. Crack/fracture simulation has been conducted on various load impacts with different initial locations at various impulse scales. The simulation results demonstrate that the proposed system has the capability to realistically and efficiently simulate 2D crack phenomena (such as window shattering and shards generation) with diverse potentials in military and civil M&S applications such as training and mission planning.
Simulation of Yeast Cooperation in 2D.
Wang, M; Huang, Y; Wu, Z
2016-03-01
Evolution of cooperation has been an active research area in evolutionary biology in decades. An important type of cooperation is developed from group selection, when individuals form spatial groups to prevent them from foreign invasions. In this paper, we study the evolution of cooperation in a mixed population of cooperating and cheating yeast strains in 2D with the interactions among the yeast cells restricted to their small neighborhoods. We conduct a computer simulation based on a game theoretic model and show that cooperation is increased when the interactions are spatially restricted, whether the game is of a prisoner's dilemma, snow drifting, or mutual benefit type. We study the evolution of homogeneous groups of cooperators or cheaters and describe the conditions for them to sustain or expand in an opponent population. We show that under certain spatial restrictions, cooperator groups are able to sustain and expand as group sizes become large, while cheater groups fail to expand and keep them from collapse.
The Thermodynamic Model of a Moon Forming Disk Based on SPH Simulations
NASA Astrophysics Data System (ADS)
Nakajima, M.; Stevenson, D. J.
2011-12-01
According to the giant impact hypothesis, a Mars size body hits the proto-Earth in the late stage of Earth forming event (e.g. Benz et al., 1986, Thompson and Stevenson 1988). The impact generates a debris disk around the proto-Earth, from which the Moon is accreted. SPH simulations suggest that the silicate disk has high temperature (~ a few thousands K) and partially vaporized (~10-30% by mass) (Canup 2004). However, SPH does not determine the state of the resulting hydrostatic disk. To do this, we have taken the output of SPH, applied conservation of entropy, mass and angular momentum and corrected for the additional energy released upon quick relaxation to the hydrostatic Keplerian state. We find that the disk is remarkably uniform in entropy but is of lower entropy than the adjacent outer shell of Earth. Constant entropy implies a temperature variation, typically from 4500K (inner disk) to 2500K (outer disk) at the midplane. For grazing impact cases (impact angles: 40 - 60 degrees, impact velocity: escape velocity, mantle material: forsterite), 90% of the disk mass is within 10 Earth radius. The disk vapor mass fractions are about 10-20%, which are consistent with Canup (2004) results. This may be an underestimate because iron is more volatile than magnesium. Mass loss from this disk will be small. The effects of initial condition differences will be discussed in the presentation. This is the first attempt to create a bridge between SPH results and a thermodynamic disk model.
Comparing AMR and SPH Cosmological Simulations. I. Dark Matter and Adiabatic Simulations
NASA Astrophysics Data System (ADS)
O'Shea, Brian W.; Nagamine, Kentaro; Springel, Volker; Hernquist, Lars; Norman, Michael L.
2005-09-01
We compare two cosmological hydrodynamic simulation codes in the context of hierarchical galaxy formation: the Lagrangian smoothed particle hydrodynamics (SPH) code GADGET, and the Eulerian adaptive mesh refinement (AMR) code Enzo. Both codes represent dark matter with the N-body method but use different gravity solvers and fundamentally different approaches for baryonic hydrodynamics. The SPH method in GADGET uses a recently developed ``entropy conserving'' formulation of SPH, while for the mesh-based Enzo two different formulations of Eulerian hydrodynamics are employed: the piecewise parabolic method (PPM) extended with a dual energy formulation for cosmology, and the artificial viscosity-based scheme used in the magnetohydrodynamics code ZEUS. In this paper we focus on a comparison of cosmological simulations that follow either only dark matter, or also a nonradiative (``adiabatic'') hydrodynamic gaseous component. We perform multiple simulations using both codes with varying spatial and mass resolution with identical initial conditions. The dark matter-only runs agree generally quite well provided Enzo is run with a comparatively fine root grid and a low overdensity threshold for mesh refinement, otherwise the abundance of low-mass halos is suppressed. This can be readily understood as a consequence of the hierarchical particle-mesh algorithm used by Enzo to compute gravitational forces, which tends to deliver lower force resolution than the tree-algorithm of GADGET at early times before any adaptive mesh refinement takes place. At comparable force resolution we find that the latter offers substantially better performance and lower memory consumption than the present gravity solver in Enzo. In simulations that include adiabatic gasdynamics we find general agreement in the distribution functions of temperature, entropy, and density for gas of moderate to high overdensity, as found inside dark matter halos. However, there are also some significant differences in
Simulation of actual terrain ocean tide in the bays with SPH
NASA Astrophysics Data System (ADS)
Tao, Wang
2017-02-01
The real-time simulation of large-scale fluid scenes is of great value in both research and application. Water when relatively still has a well-defined surface; however, water changes its shape as it moves. In the case of ocean waves, features on the water’s surface move, but the water itself does not travel. The simple surface topology can become arbitrarily complex when the water becomes turbulent. Splashing, foaming, and breaking waves are complex processes best modeled by particle systems and volumetric techniques, but these techniques are inefficient in nonturbulent situations. Ocean tide in different bays can experience rotary tidal currents or other situation. We choose the physical-based SPH(smoothed particle hydrodynamics) fluid simulation method. SPH method belongs to particle method which is has no grid. The advantages of SPH are as follows: simulating liquid convection by particles directly to eliminate numerical fluctuation at free interface; grids unnecessary avoid grid distortion and reconstruction; simulating the fluid problem of significant transformation, especially in dealing the problems such as maximum distortion, the interface of motion material, the deformation boundary and free surface flow. Application of rapid neighboring particle search method, set the number of Department of Physics, as well as the presentation and rendering of fluid material, and finally use the Lagrangian method SPH system initialization and calculate the fluid density, pressure, internal forces and external forces, define the time integration and collision handling. With the analysis of physical-based ocean tide simulation, we can create the animation of the environment, and predict damage of ocean tide.
The impact of numerical viscosity in SPH simulations of galaxy clusters
NASA Astrophysics Data System (ADS)
Valdarnini, R.
2011-02-01
The goal of this paper is to investigate in N-body/SPH hydrodynamical cluster simulations the impact of artificial viscosity on the ICM thermal and velocity field statistical properties. To properly reduce the effects of artificial viscosity, a time-dependent artificial viscosity scheme is implemented in an SPH code in which each particle has its own viscosity parameter, whose time evolution is governed by the local shock conditions. The new SPH code is verified in a number of test problems with known analytical or numerical reference solutions and is then used to construct a large set of N-body/SPH hydrodynamical cluster simulations. These simulations are designed to study in SPH simulations the impact of artificial viscosity on the thermodynamics of the ICM and its velocity field statistical properties by comparing results extracted at the present epoch from runs with different artificial viscosity parameters, cluster dynamical states, numerical resolution, and physical modeling of the gas. Spectral properties of the gas velocity field are investigated by measuring the velocity power spectrum E(k) for the simulated clusters. Over a limited range, the longitudinal component Ec(k) exhibits a Kolgomorov-like scaling ∝ k-5/3, whilst the solenoidal power spectrum component Es(k) is strongly influenced by numerical resolution effects. The dependence of the spectra E(k) on dissipative effects is found to be significant at length scales ⪉ 100-300 kpc, with viscous damping of the velocities being less pronounced in the runs with the lowest artificial viscosity. The turbulent energy density radial profile Eturb(r) is strongly affected by the numerical viscosity scheme adopted in the simulations, with the turbulent-to-total energy density ratios being higher in the runs with the lowest artificial viscosity settings and lying in the range between a few percent and ~10%. These values are in accord with the corresponding ratios extracted from previous cluster simulations
Comparative study of different SPH schemes on simulating violent water wave impact flows
NASA Astrophysics Data System (ADS)
Zheng, Xing; Ma, Qing-wei; Duan, Wen-yang
2014-12-01
Free surface flows are of significant interest in Computational Fluid Dynamics (CFD). However, violent water wave impact simulation especially when free surface breaks or impacts on solid wall can be a big challenge for many CFD techniques. Smoothed Particle Hydrodynamics (SPH) has been reported as a robust and reliable method for simulating violent free surface flows. Weakly compressible SPH (WCSPH) uses an equation of state with a large sound speed, and the results of the WCSPH can induce a noisy pressure field and spurious oscillation of pressure in time history for wave impact problem simulation. As a remedy, the truly incompressible SPH (ISPH) technique was introduced, which uses a pressure Poisson equation to calculate the pressure. Although the pressure distribution in the whole field obtained by ISPH is smooth, the stability of the techniques is still an open discussion. In this paper, a new free surface identification scheme and solid boundary handling method are introduced to improve the accuracy of ISPH. This modified ISPH is used to study dam breaking flow and violent tank sloshing flows. On the comparative study of WCSPH and ISPH, the accuracy and efficiency are assessed and the results are compared with the experimental data.
Incompressible SPH Model for Simulating Violent Free-Surface Fluid Flows
NASA Astrophysics Data System (ADS)
Staroszczyk, Ryszard
2014-06-01
In this paper the problem of transient gravitational wave propagation in a viscous incompressible fluid is considered, with a focus on flows with fast-moving free surfaces. The governing equations of the problem are solved by the smoothed particle hydrodynamics method (SPH). In order to impose the incompressibility constraint on the fluid motion, the so-called projection method is applied in which the discrete SPH equations are integrated in time by using a fractional-step technique. Numerical performance of the proposed model has been assessed by comparing its results with experimental data and with results obtained by a standard (weakly compressible) version of the SPH approach. For this purpose, a plane dam-break flow problem is simulated, in order to investigate the formation and propagation of a wave generated by a sudden collapse of a water column initially contained in a rectangular tank, as well as the impact of such a wave on a rigid vertical wall. The results of simulations show the evolution of the free surface of water, the variation of velocity and pressure fields in the fluid, and the time history of pressures exerted by an impacting wave on a wall.
A Comparison of Grid-based and SPH Binary Mass-transfer and Merger Simulations
NASA Astrophysics Data System (ADS)
Motl, Patrick M.; Frank, Juhan; Staff, Jan; Clayton, Geoffrey C.; Fryer, Christopher L.; Even, Wesley; Diehl, Steven; Tohline, Joel E.
2017-04-01
There is currently a great amount of interest in the outcomes and astrophysical implications of mergers of double degenerate binaries. In a commonly adopted approximation, the components of such binaries are represented by polytropes with an index of n = 3/2. We present detailed comparisons of stellar mass-transfer and merger simulations of polytropic binaries that have been carried out using two very different numerical algorithms—a finite-volume “grid” code and a smoothed-particle hydrodynamics (SPH) code. We find that there is agreement in both the ultimate outcomes of the evolutions and the intermediate stages if the initial conditions for each code are chosen to match as closely as possible. We find that even with closely matching initial setups, the time it takes to reach a concordant evolution differs between the two codes because the initial depth of contact cannot be matched exactly. There is a general tendency for SPH to yield higher mass transfer rates and faster evolution to the final outcome. We also present comparisons of simulations calculated from two different energy equations: in one series, we assume a polytropic equation of state and in the other series an ideal gas equation of state. In the latter series of simulations, an atmosphere forms around the accretor, which can exchange angular momentum and cause a more rapid loss of orbital angular momentum. In the simulations presented here, the effect of the ideal equation of state is to de-stabilize the binary in both SPH and grid simulations, but the effect is more pronounced in the grid code.
SPH simulation of boron carbide under shock compression with different failure models
NASA Astrophysics Data System (ADS)
Dyachkov, S. A.; Parshikov, A. N.; Zhakhovsky, V. V.
2017-02-01
Boron carbide behavior under shock compression is analyzed by comparison of SPH simulations with two sets of plate-impact experiments where the used samples were manufactured using different technology. Various boron carbide failure models are applied to determine the relevant mechanical properties which are responsible for the velocity profiles obtained from VISAR measurements. We show that in order to fit the experimental profiles the strength of the failed state of material should be different in those experiments. This strength is demonstrated to be a unique function of pressure irrespective of the utilized failure models.
Incompressible SPH method based on Rankine source solution for violent water wave simulation
NASA Astrophysics Data System (ADS)
Zheng, X.; Ma, Q. W.; Duan, W. Y.
2014-11-01
With wide applications, the smoothed particle hydrodynamics method (abbreviated as SPH) has become an important numerical tool for solving complex flows, in particular those with a rapidly moving free surface. For such problems, the incompressible Smoothed Particle Hydrodynamics (ISPH) has been shown to yield better and more stable pressure time histories than the traditional SPH by many papers in literature. However, the existing ISPH method directly approximates the second order derivatives of the functions to be solved by using the Poisson equation. The order of accuracy of the method becomes low, especially when particles are distributed in a disorderly manner, which generally happens for modelling violent water waves. This paper introduces a new formulation using the Rankine source solution. In the new approach to the ISPH, the Poisson equation is first transformed into another form that does not include any derivative of the functions to be solved, and as a result, does not need to numerically approximate derivatives. The advantage of the new approach without need of numerical approximation of derivatives is obvious, potentially leading to a more robust numerical method. The newly formulated method is tested by simulating various water waves, and its convergent behaviours are numerically studied in this paper. Its results are compared with experimental data in some cases and reasonably good agreement is achieved. More importantly, numerical results clearly show that the newly developed method does need less number of particles and so less computational costs to achieve the similar level of accuracy, or to produce more accurate results with the same number of particles compared with the traditional SPH and existing ISPH when it is applied to modelling water waves.
Parallel peridynamics-SPH simulation of explosion induced soil fragmentation by using OpenMP
NASA Astrophysics Data System (ADS)
Fan, Houfu; Li, Shaofan
2017-04-01
In this work, we use the OpenMP-based shared-memory parallel programming to implement the recently developed coupling method of state-based peridynamics and smoothed particle hydrodynamics (PD-SPH), and we then employ the program to simulate dynamic soil fragmentation induced by the explosion of the buried explosives. The paper offers detailed technical description and discussion on the PD-SHP coupling algorithm and how to use the OpenMP shared-memory programming to implement such large-scale computation in a desktop environment, with an example to illustrate the basic computing principle and the parallel algorithm structure. In specific, the paper provides a complete OpenMP parallel algorithm for the PD-SPH scheme with the programming and parallelization details. Numerical examples of soil fragmentation caused by the buried explosives are also presented. Results show that the simulation carried out by the OpenMP parallel code is much faster than that by the corresponding serial computer code.
Parallel peridynamics-SPH simulation of explosion induced soil fragmentation by using OpenMP
NASA Astrophysics Data System (ADS)
Fan, Houfu; Li, Shaofan
2016-06-01
In this work, we use the OpenMP-based shared-memory parallel programming to implement the recently developed coupling method of state-based peridynamics and smoothed particle hydrodynamics (PD-SPH), and we then employ the program to simulate dynamic soil fragmentation induced by the explosion of the buried explosives. The paper offers detailed technical description and discussion on the PD-SHP coupling algorithm and how to use the OpenMP shared-memory programming to implement such large-scale computation in a desktop environment, with an example to illustrate the basic computing principle and the parallel algorithm structure. In specific, the paper provides a complete OpenMP parallel algorithm for the PD-SPH scheme with the programming and parallelization details. Numerical examples of soil fragmentation caused by the buried explosives are also presented. Results show that the simulation carried out by the OpenMP parallel code is much faster than that by the corresponding serial computer code.
SPH Simulations of Star Formation in the Eagle Nebula (M16)
NASA Astrophysics Data System (ADS)
Morgan, Larry; Miao, Jingqi; Thompson, Mark; White, Glenn
We present 3D-SPH simulations of triggered star formation at the tips of the well-observed Eagle Nebula in order to understand induced star formation by radiation fields, to gain an overview about the evolutionary processes occurring at the tips of these "elephant trunks". We attempt to answer questions such as: are the tips of the Eagle Nebula trunks starting the final stages of collapse? Or are the structures seen in M16 in a near-steady state? The modelling is based on an existing SPH code, which includes a large chemical network, refined chemical and dust properties, and has been upgraded to include the interaction of an external radiation field with molecular clouds as well as relative abundances of molecular species subject to different boundary and initial conditions. We investigate the effects of the initial density distribution and chaotic motion of the molecular clouds on the dynamical collapse of their cores. The role of the radiation field flux strength in triggering star formation at the tips of these elephant trunks is examined in order to explain the observed star formation.
3D SPH numerical simulation of the wave generated by the Vajont rockslide
NASA Astrophysics Data System (ADS)
Vacondio, R.; Mignosa, P.; Pagani, S.
2013-09-01
A 3D numerical modeling of the wave generated by the Vajont slide, one of the most destructive ever occurred, is presented in this paper. A meshless Lagrangian Smoothed Particle Hydrodynamics (SPH) technique was adopted to simulate the highly fragmented violent flow generated by the falling slide in the artificial reservoir. The speed-up achievable via General Purpose Graphic Processing Units (GP-GPU) allowed to adopt the adequate resolution to describe the phenomenon. The comparison with the data available in literature showed that the results of the numerical simulation reproduce satisfactorily the maximum run-up, also the water surface elevation in the residual lake after the event. Moreover, the 3D velocity field of the flow during the event and the discharge hydrograph which overtopped the dam, were obtained.
NASA Astrophysics Data System (ADS)
Li-Jun, Shen; Yong-Jian, Wan; Kai, Meng; Chuan-Ke, Huang
2015-06-01
Surface roughness is one of the most important parameters of surface quality and a difficult technical issue in glass polishing, especially for traditional polishing. In this paper, the coupled algorithm of FEM/SPH has been used to simulate the deformation of brittle K9 glass in traditional polishing. The influences of polishing particle size and insert depth on surface roughness are analyzed in detail. Then, experiment is carried out on a ∅100 mm flat K9 mirror with three sorts of particle, ceria abrasive particle with 1.2, 1.6 and 2 μm. Simulation and experiment results show that surface roughness of brittle glass has direct relationship with particle size during traditional polishing process. The surface roughness is better as the particle size is smaller.
Lahar simulation with SPH and field calibration at the Colima Volcano (Mexico)
NASA Astrophysics Data System (ADS)
Calvo, Leticia; Haddad, Bouchra; Capra, Lucia; Palacios, David
2015-04-01
As a result of the frequent effusive activity of Volcán de Colima (10° 30'44''N, 103° 37'02'' W), the most active volcano in Mexico, plenty of rain triggered lahars are produced, especially during the rainy season. Along the recent period of activity, particularly from 2010, many of these lahars channelled through the main ravines of the volcano and reach large distances, representing high risk for more than 10,000 people at the surroundings. Modeling of lahars has become an important tool in the assessment of the related hazards, in order to undertake appropriate mitigation actions and reduce the associated risks. Recent lahars at the Colima Volcano are well documented, so they can be used to prove the accuracy of modelling. In this work, we used the SPH (Smoothed Particle Hydrodynamics) method, a depth integrated coupled model created by Pastor in 2005, to replicate the propagation stage of 3 recent Colima lahars occurred on Montegrande ravine in 1992, 2011 and 2012. The studied events include hyperconcentrated, debris and a mixture of the previous flow natures. The inputs used for the SPH simulations were the initial point, volume of each lahar and an adapted morphology of its mass. Field data used to verify the SPH results include the stopping point of the lahar, its path, velocity and height values, as the floodplain area. All this information was a result of fieldwork recognition (cross section profiles of the inner part of the ravine) and free satellite imagery analysis. The best results were obtained using Bingham rheology. The proposed parameters to simulate Colima lahars were 20 Pa of yield strength and 30 Pa.s of viscosity for the 1992 lahar (hyperconcentrated flow), 200 Pa and 50 Pa.s in case of the 2011 debris flow, and finally 20 Pa and 24 Pa.s for the 2012 event, whose nature evolved from debris to an hyperconcentrated flow. In all cases a 1900 kg/m3 density was used. Highly accurate results showed the relevant role played by rheological
NASA Astrophysics Data System (ADS)
Bettoni, D.; Mazzei, P.; Rampazzo, R.; Marino, A.; Galletta, G.; Buson, L. M.
2014-11-01
The Galaxy Evolution Explorer ( GALEX) detected ultraviolet emission in about 50 % of multi-spin early-type galaxies (ETGs), suggesting the occurrence of a recent rejuvenation episode connected to the formation of these kinematical features. With the aim at investigating the complex evolutionary scenario leading to the formation of counter rotating ETGs (CR-ETGs) we use our Smooth Particle Hydrodynamic (SPH) code with chemo-photometric implementation. We discuss here the UV evolutionary path of two CR-ETGs, NGC 3593 and NGC 5173, concurrently best fitting their global observed properties, i.e., morphology, dynamics, as well as their total B-band absolute magnitude and spectral energy distribution (SED) extended over three orders of magnitude in wavelength. These simulations correspond to our predictions about the target evolution which we follow in the color-magnitude diagram (CMD), near-UV (NUV) versus r-band absolute magnitude, as a powerful diagnostic tool to emphasize rejuvenation episodes.
SPH Simulation of Liquid Scattering from the Edge of a Rotary Atomizer
NASA Astrophysics Data System (ADS)
Izawa, Seiichiro; Ito, Takuya; Shigeta, Masaya; Fukunishi, Yu
2013-11-01
Three-dimensional incompressible SPH method is used to simulate the behavior of liquid scattering from the edge of a rotary atomizer. Rotary atomizers have been widely used for spraying, painting and coating, for instance, in the automobile industry. However, how the spray droplets are formed after leaving the edge of the rotary atomizer is not well understood, because the scale of the phenomenon is very small and the speed of rotation is very fast. The present computational result shows that while the liquid forms a film on the surface of the rotating disk of the atomizer, it quickly deforms into many thin columns after leaving the disk edge, and these columns soon break up into fine droplets which spread out in the radial direction. The size of droplets tends to become smaller with the increase in the disk rotating speed. The results show good agreement with the experimental observations.
The effects of ionizing radiation on the evolution of SPH-simulated galaxies
NASA Astrophysics Data System (ADS)
Hambrick, David Clay
2010-12-01
Since its beginning some fifteen years ago, the simulation of galaxies using smoothed-particle hydrodynamics (SPH) codes has become a crucial tool to understand the physics which shapes the evolution of galaxies from their origins in the early Universe to what we observe in the local Universe today. However, one piece of this physics has been relatively understudied: namely, the ionizing radiation---ultraviolet (UV) and X-ray---which is emitted by early stars, supernovae, and the accretion regions of massive black holes (BHs), and which permeates the Universe from the epoch of reionization to the present day. Therefore I perform my own SPH simulations of galaxies to study in detail the influence of this radiation. In the first chapter of this work I find that the UV background used by most simulations to date may not fit observations constraining it at high redshift, and furthermore the details of the UV background at those redshifts, as well as the presence of an X-ray component, can strongly affect galaxy formation and evolution, specifically the gas dynamics and the amount and location of star formation. In the second chapter I consider why, even though the dark-matter power spectrum and dark-matter simulations predict a large number of small satellite galaxies, hydrodynamic simulations have typically produced fewer satellites, consistent with observations. Performing simulations with various UV and X-ray backgrounds, I show that the number of small galaxies at the present is dependent primarily on the mean gas temperature at the epoch when low-mass systems form their stars, and this temperature is significantly determined by the ionizing radiation background. In the third and final chapter I leave the ionizing background and turn to X-rays emitted by local active galactic nuclei (AGN)---which are massive, accreting BHs. I perform simulations with this new mode of feedback added to the standard mode (the injection of energy to adjacent gas), and find that the X
Simulating MEMS Chevron Actuator for Strain Engineering 2D Materials
NASA Astrophysics Data System (ADS)
Vutukuru, Mounika; Christopher, Jason; Bishop, David; Swan, Anna
2D materials pose an exciting paradigm shift in the world of electronics. These crystalline materials have demonstrated high electric and thermal conductivities and tensile strength, showing great potential as the new building blocks of basic electronic circuits. However, strain engineering 2D materials for novel devices remains a difficult experimental feat. We propose the integration of 2D materials with MEMS devices to investigate the strain dependence on material properties such as electrical and thermal conductivity, refractive index, mechanical elasticity, and band gap. MEMS Chevron actuators, provides the most accessible framework to study strain in 2D materials due to their high output force displacements for low input power. Here, we simulate Chevron actuators on COMSOL to optimize actuator design parameters and accurately capture the behavior of the devices while under the external force of a 2D material. Through stationary state analysis, we analyze the response of the device through IV characteristics, displacement and temperature curves. We conclude that the simulation precisely models the real-world device through experimental confirmation, proving that the integration of 2D materials with MEMS is a viable option for constructing novel strain engineered devices. The authors acknowledge support from NSF DMR1411008.
Radiative transfer and the energy equation in SPH simulations of star formation
NASA Astrophysics Data System (ADS)
Stamatellos, D.; Whitworth, A. P.; Bisbas, T.; Goodwin, S.
2007-11-01
Aims:We introduce and test a new and highly efficient method for treating the thermal and radiative effects influencing the energy equation in SPH simulations of star formation. Methods: The method uses the density, temperature and gravitational potential of each particle to estimate a mean optical depth, which then regulates the particle's heating and cooling. The method captures - at minimal computational cost - the effects of (i) the rotational and vibrational degrees of freedom of H2; (ii) H{_2} dissociation and Ho ionisation; (iii) opacity changes due to ice mantle melting, sublimation of dust, molecular lines, H^-, bound-free and free-free processes and electron scattering; (iv) external irradiation; and (v) thermal inertia. Results: We use the new method to simulate the collapse of a 1 {M}_⊙ cloud of initially uniform density and temperature. At first, the collapse proceeds almost isothermally (T∝oρ0.08; cf. Larson 2005, MNRAS, 359, 211). The cloud starts heating fast when the optical depth to the cloud centre reaches unity (ρ_C˜ 7×10-13 {g cm-3}). The first core forms at ρ_C˜ 4×10-9 {g cm-3} and steadily increases in mass. When the temperature at the centre reaches T_C˜ 2000 K, molecular hydrogen starts to dissociate and the second collapse begins, leading to the formation of the second (protostellar) core. The results mimic closely the detailed calculations of Masunaga & Inutsuka (2000, ApJ, 531, 350). We also simulate (i) the collapse of a 1.2 {M}_⊙ cloud, which initially has uniform density and temperature, (ii) the collapse of a 1.2 {M}_⊙ rotating cloud, with an m=2 density perturbation and uniform initial temperature, and (iii) the smoothing of temperature fluctuations in a static, uniform density sphere. In all these tests the new algorithm reproduces the results of previous authors and/or known analytic solutions. The computational cost is comparable to a standard SPH simulation with a simple barotropic equation of state. The method
Dynamic simulations of geologic materials using combined FEM/DEM/SPH analysis
Morris, J P; Johnson, S M
2008-03-26
An overview of the Lawrence Discrete Element Code (LDEC) is presented, and results from a study investigating the effect of explosive and impact loading on geologic materials using the Livermore Distinct Element Code (LDEC) are detailed. LDEC was initially developed to simulate tunnels and other structures in jointed rock masses using large numbers of polyhedral blocks. Many geophysical applications, such as projectile penetration into rock, concrete targets, and boulder fields, require a combination of continuum and discrete methods in order to predict the formation and interaction of the fragments produced. In an effort to model this class of problems, LDEC now includes implementations of Cosserat point theory and cohesive elements. This approach directly simulates the transition from continuum to discontinuum behavior, thereby allowing for dynamic fracture within a combined finite element/discrete element framework. In addition, there are many application involving geologic materials where fluid-structure interaction is important. To facilitate solution of this class of problems a Smooth Particle Hydrodynamics (SPH) capability has been incorporated into LDEC to simulate fully coupled systems involving geologic materials and a saturating fluid. We will present results from a study of a broad range of geomechanical problems that exercise the various components of LDEC in isolation and in tandem.
Simulations of Fracture and Fragmentation of Geologic Materials using Combined FEM/DEM/SPH Analysis
Morris, J P; Johnson, S M
2007-04-05
An overview of the Lawrence Discrete Element Code (LDEC) is presented, and results from a study investigating the effect of explosive and impact loading on geologic materials using the Livermore Distinct Element Code (LDEC) are detailed. LDEC was initially developed to simulate tunnels and other structures in jointed rock masses using large numbers of polyhedral blocks. Many geophysical applications, such as projectile penetration into rock, concrete targets, and boulder fields, require a combination of continuum and discrete methods in order to predict the formation and interaction of the fragments produced. In an effort to model this class of problems, LDEC now includes implementations of Cosserat point theory and cohesive elements. This approach directly simulates the transition from continuum to discontinuum behavior, thereby allowing for dynamic fracture within a combined finite element/discrete element framework. In addition, a Smooth Particle Hydrodynamics (SPH) capability has been incorporated into LDEC, permitting the simulation of fluid-structure interaction. We will present results from a study of detonation-induced fracture and fragmentation of geologic media surrounding a tunnel using LDEC.
2-D Clinostat for Simulated Microgravity Experiments with Arabidopsis Seedlings
NASA Astrophysics Data System (ADS)
Wang, Hui; Li, Xugang; Krause, Lars; Görög, Mark; Schüler, Oliver; Hauslage, Jens; Hemmersbach, Ruth; Kircher, Stefan; Lasok, Hanna; Haser, Thomas; Rapp, Katja; Schmidt, Jürgen; Yu, Xin; Pasternak, Taras; Aubry-Hivet, Dorothée; Tietz, Olaf; Dovzhenko, Alexander; Palme, Klaus; Ditengou, Franck Anicet
2016-04-01
Ground-based simulators of microgravity such as fast rotating 2-D clinostats are valuable tools to study gravity related processes. We describe here a versatile g-value-adjustable 2-D clinostat that is suitable for plant analysis. To avoid seedling adaptation to 1 g after clinorotation, we designed chambers that allow rapid fixation. A detailed protocol for fixation, RNA isolation and the analysis of selected genes is described. Using this clinostat we show that mRNA levels of LONG HYPOCOTYL 5 (HY5), MIZU-KUSSEI 1 (MIZ1) and microRNA MIR163 are down-regulated in 5-day-old Arabidopsis thaliana roots after 3 min and 6 min of clinorotation using a maximal reduced g-force of 0.02 g, hence demonstrating that this 2-D clinostat enables the characterization of early transcriptomic events during root response to microgravity. We further show that this 2-D clinostat is able to compensate the action of gravitational force as both gravitropic-dependent statolith sedimentation and subsequent auxin redistribution (monitoring D R5 r e v :: G F P reporter) are abolished when plants are clinorotated. Our results demonstrate that 2-D clinostats equipped with interchangeable growth chambers and tunable rotation velocity are suitable for studying how plants perceive and respond to simulated microgravity.
Modeling the Dynamics of Interacting Galaxy Pairs - Testing Identikit Using GADGET SPH Simulations
NASA Astrophysics Data System (ADS)
Mortazavi, S. Alireza; Lotz, Jennifer; Barnes, Joshua E.
2015-01-01
We develop and test an automated technique to model the dynamics of interacting galaxy pairs. We use Identikit (Barnes & Hibbard 2009; Barnes 2011) as a tool for modeling and matching the morphology and kinematics of the interacting pairs of similar-size galaxies. In order to reduce the effect of subjective human interference, we automate the selection of phase-space regions used to match simulations to data, and we explore how selection of these regions affects the random uncertainties of parameters in the best-fit model. In this work, we used an independent set of GADGET SPH simulations as input data, so we determined the systematic bias in the measured encounter parameters based on the known initial conditions of these simulations. We tested both cold gas and young stellar components in the GADGET simulations to explore the effect of choosing HI vs. Hα as the line of sight velocity tracer. We found that we can group the results into tests with good, fair, and poor convergence based on the distribution of parameters of models close enough to the best-fit model. For tests with good and fair convergence, we ruled out large fractions of parameter space and recovered merger stage, eccentricity, viewing angle, and pericentric distance within 2σ of the correct value. All of tests on gaseous component of prograde systems had either good or fair convergence. Retrograde systems and most of tests on young stars had poor convergence and may require constraints from regions other than the tidal tails. In this work we also present WIYN SparsePak IFU data for a few interacting galaxies, and we show the result of applying our method on this data set.
Simulation of 2D Fields of Raindrop Size Distributions
NASA Astrophysics Data System (ADS)
Berne, A.; Schleiss, M.; Uijlenhoet, R.
2008-12-01
The raindrop size distribution (DSD hereafter) is of primary importance for quantitative applications of weather radar measurements. The radar reflectivity~Z (directly measured by radar) is related to the power backscattered by the ensemble of hydrometeors within the radar sampling volume. However, the rain rate~R (the flux of water to the surface) is the variable of interest for many applications (hydrology, weather forecasting, air traffic for example). Usually, radar reflectivity is converted into rain rate using a power law such as Z=aRb. The coefficients a and b of the Z-R relationship depend on the DSD. The variability of the DSD in space and time has to be taken into account to improve radar rain rate estimates. Therefore, the ability to generate a large number of 2D fields of DSD which are statistically homogeneous provides a very useful simulation framework that nicely complements experimental approaches based on DSD data, in order to investigate radar beam propagation through rain as well as radar retrieval techniques. The proposed approach is based on geostatistics for structural analysis and stochastic simulation. First, the DSD is assumed to follow a gamma distribution. Hence a 2D field of DSDs can be adequately described as a 2D field of a multivariate random function consisting of the three DSD parameters. Such fields are simulated by combining a Gaussian anamorphosis and a multivariate Gaussian random field simulation algorithm. Using the (cross-)variogram models fitted on data guaranties that the spatial structure of the simulated fields is consistent with the observed one. To assess its validity, the proposed method is applied to data collected during intense Mediterranean rainfall. As only time series are available, Taylor's hypothesis is assumed to convert time series in 1D range profile. Moreover, DSD fields are assumed to be isotropic so that the 1D structure can be used to simulate 2D fields. A large number of 2D fields of DSD parameters are
Simulating non-Newtonian flows with the moving particle semi-implicit method with an SPH kernel
NASA Astrophysics Data System (ADS)
Xiang, Hao; Chen, Bin
2015-02-01
The moving particle semi-implicit (MPS) method and smoothed particle hydrodynamics (SPH) are commonly used mesh-free particle methods for free surface flows. The MPS method has superiority in incompressible flow simulation and simple programing. However, the crude kernel function is not accurate enough for the discretization of the divergence of the shear stress tensor by the particle inconsistency when the MPS method is extended to non-Newtonian flows. This paper presents an improved MPS method with an SPH kernel to simulate non-Newtonian flows. To improve the consistency of the partial derivative, the SPH cubic spline kernel and the Taylor series expansion are combined with the MPS method. This approach is suitable for all non-Newtonian fluids that can be described with τ = μ(|γ|) Δ (where τ is the shear stress tensor, μ is the viscosity, |γ| is the shear rate, and Δ is the strain tensor), e.g., the Casson and Cross fluids. Two examples are simulated including the Newtonian Poiseuille flow and container filling process of the Cross fluid. The results of Poiseuille flow are more accurate than the traditional MPS method, and different filling processes are obtained with good agreement with previous results, which verified the validation of the new algorithm. For the Cross fluid, the jet fracture length can be correlated with We0.28Fr0.78 (We is the Weber number, Fr is the Froude number).
Dynamics of stars around spiral arms in an N-body/SPH simulated barred spiral galaxy
NASA Astrophysics Data System (ADS)
Grand, Robert J. J.; Kawata, Daisuke; Cropper, Mark
2012-10-01
We run N-body smoothed particle hydrodynamics (SPH) simulations of a Milky Way-sized galaxy. The code takes into account hydrodynamics, self-gravity, star formation, supernova and stellar wind feedback, radiative cooling and metal enrichment. The simulated galaxy is a barred spiral galaxy consisting of a stellar and gas disc, enveloped in a static dark matter halo. Similar to what is found in our pure N-body simulation of a non-barred galaxy in Grand et al., we find that the spiral arms are transient features whose pattern speeds decrease with radius, in such a way that the pattern speed is similar to the rotation of star particles. Compared to the non-barred case, we find that the spiral arm pattern speed is slightly faster than the rotation speed of star particles: the bar appears to boost the pattern speed ahead of the rotational velocity. We trace particle motion around the spiral arms at different radii, and demonstrate that there are star particles that are drawn towards and join the arm from behind (in front of) the arm and migrate towards the outer (inner) regions of the disc until the arm disappears as a result of their transient nature. We see this migration over the entire radial range analysed, which is a consequence of the spiral arm rotating at similar speeds to star particles at all radii, which is inconsistent with the prediction of classical density wave theory. The bar does not prevent this systematic radial migration, which is shown to largely preserve circular orbits. We also demonstrate that there is no significant offset of different star-forming tracers across the spiral arm, which is also inconsistent with the prediction of classical density wave theory.
NASA Astrophysics Data System (ADS)
Kobayashi, Chiaki
2005-08-01
We simulate the formation and chemodynamical evolution of 128 elliptical galaxies using a GRAPE-SPH code that includes various physical processes that are associated with the formation of stellar systems: radiative cooling, star formation, feedback from Type II and Ia supernovae and stellar winds, and chemical enrichment. We find that the star formation time-scale controls when and where stars form in the contracting gas cloud, determines the effective radius at given mass, and is constrained by observation to be 10 times longer than the local dynamical time-scale. We succeed in reproducing the observed global scaling relations under our cold dark matter based scenario, e.g. the Faber-Jackson relation, the Kormendy relation and the fundamental plane. An intrinsic scatter exists along the fundamental plane, and the origin of this scatter lies in differences in merging history. Galaxies that undergo major merger events tend to have larger effective radii and fainter surface brightnesses, which result in larger masses, smaller surface brightnesses and larger mass-to-light ratios. We can also reproduce the observed colour-magnitude and mass-metallicity relations, although the scatter is larger than observed. The scatter arises because feedback is not very effective and star formation does not terminate completely in our simulations. ~25 per cent of accreted baryons are blown away in the simulations, independent of the assumed star formation time-scale and initial mass function. Most heavy elements end up locked into stars in the galaxy. The ejected metal fraction depends only on the star formation time-scale, and is ~2 per cent even to rapid star formation.
MHD instabilities in accretion mounds - I. 2D axisymmetric simulations
NASA Astrophysics Data System (ADS)
Mukherjee, Dipanjan; Bhattacharya, Dipankar; Mignone, Andrea
2013-04-01
We have performed stability analysis of axisymmetric accretion mounds on neutron stars in high-mass X-ray binaries by 2D magnetohydrodynamic (MHD) simulations with the PLUTO MHD code. We find that the mounds are stable with respect to interchange instabilities, but the addition of excess mass destabilizes the equilibria. Our simulations confirm that accretion mounds are unstable with respect to MHD instabilities beyond a threshold mass. We investigate both filled and hollow mounds and for the latter also compute the expected profile of cyclotron resonance scattering features (CRSF). In comparison to the CRSF from filled mounds reported in our earlier work, hollow mounds display wider and more complex line profiles.
GRAPE-SPH chemodynamical simulation of elliptical galaxies - I. Evolution of metallicity gradients
NASA Astrophysics Data System (ADS)
Kobayashi, Chiaki
2004-01-01
We simulate the formation and chemodynamical evolution of 124 elliptical galaxies using a GRAPE-SPH code that includes various physical processes that are associated with the formation of stellar systems: radiative cooling, star formation, feedback from Type II and Ia supernovae and stellar winds, and chemical enrichment. In our cold dark matter (CDM)-based scenario, galaxies form through the successive merging of subgalaxies with various masses. Their merging histories vary between a major merger at one extreme and a monolithic collapse of a slow-rotating gas cloud at the other extreme. We examine the physical conditions during 151 merging events that occur in our simulation. The basic processes driving the evolution of the metallicity gradients are as follows: (i) destruction by mergers to an extent dependent on the progenitor mass ratio; (ii) regeneration when strong central star formation is induced at a rate dependent on the gas mass of the secondary; and (iii) slow evolution as star formation is induced in the outer regions through late gas accretion. We succeed in reproducing the observed variety of the radial metallicity gradients. The average metallicity gradient Δlog Z/Δlog r~=- 0.3 with dispersion of +/- 0.2 and no correlation between gradient and galaxy mass are consistent with observations of Mg2 gradients. The variety of the gradients stems from the difference in the merging histories. Galaxies that form monolithically have steeper gradients, while galaxies that undergo major mergers have shallower gradients. Thus merging histories can, in principle, be inferred from the observed metallicity gradients of present-day galaxies. The observed variation in the metallicity gradients cannot be explained either by monolithic collapse or by major merger alone. Rather it requires a model in which both formation processes arise, such as the present CDM scheme.
Kinetic AGN feedback effects on cluster cool cores simulated using SPH
NASA Astrophysics Data System (ADS)
Barai, Paramita; Murante, Giuseppe; Borgani, Stefano; Gaspari, Massimo; Granato, Gian Luigi; Monaco, Pierluigi; Ragone-Figueroa, Cinthia
2016-09-01
We implement novel numerical models of AGN feedback in the SPH code GADGET-3, where the energy from a supermassive black hole (BH) is coupled to the surrounding gas in the kinetic form. Gas particles lying inside a bi-conical volume around the BH are imparted a one-time velocity (10 000 km s-1) increment. We perform hydrodynamical simulations of isolated cluster (total mass 1014 h-1 M⊙), which is initially evolved to form a dense cool core, having central T ≤ 106 K. A BH resides at the cluster centre, and ejects energy. The feedback-driven fast wind undergoes shock with the slower moving gas, which causes the imparted kinetic energy to be thermalized. Bipolar bubble-like outflows form propagating radially outward to a distance of a few 100 kpc. The radial profiles of median gas properties are influenced by BH feedback in the inner regions (r < 20-50 kpc). BH kinetic feedback, with a large value of the feedback efficiency, depletes the inner cool gas and reduces the hot gas content, such that the initial cool core of the cluster is heated up within a time 1.9 Gyr, whereby the core median temperature rises to above 107 K, and the central entropy flattens. Our implementation of BH thermal feedback (using the same efficiency as kinetic), within the star formation model, cannot do this heating, where the cool core remains. The inclusion of cold gas accretion in the simulations produces naturally a duty cycle of the AGN with a periodicity of 100 Myr.
Raskin, Cody; Owen, J. Michael
2016-10-24
Here, we discuss a generalization of the classic Keplerian disk test problem allowing for both pressure and rotational support, as a method of testing astrophysical codes incorporating both gravitation and hydrodynamics. We argue for the inclusion of pressure in rotating disk simulations on the grounds that realistic, astrophysical disks exhibit non-negligible pressure support. We then apply this test problem to examine the performance of various smoothed particle hydrodynamics (SPH) methods incorporating a number of improvements proposed over the years to address problems noted in modeling the classical gravitation-only Keplerian disk. We also apply this test to a newly developed extension of SPH based on reproducing kernels called CRKSPH. Counterintuitively, we find that pressure support worsens the performance of traditional SPH on this problem, causing unphysical collapse away from the steady-state disk solution even more rapidly than the purely gravitational problem, whereas CRKSPH greatly reduces this error.
Raskin, Cody; Owen, J. Michael
2016-10-24
Here, we discuss a generalization of the classic Keplerian disk test problem allowing for both pressure and rotational support, as a method of testing astrophysical codes incorporating both gravitation and hydrodynamics. We argue for the inclusion of pressure in rotating disk simulations on the grounds that realistic, astrophysical disks exhibit non-negligible pressure support. We then apply this test problem to examine the performance of various smoothed particle hydrodynamics (SPH) methods incorporating a number of improvements proposed over the years to address problems noted in modeling the classical gravitation-only Keplerian disk. We also apply this test to a newly developed extensionmore » of SPH based on reproducing kernels called CRKSPH. Counterintuitively, we find that pressure support worsens the performance of traditional SPH on this problem, causing unphysical collapse away from the steady-state disk solution even more rapidly than the purely gravitational problem, whereas CRKSPH greatly reduces this error.« less
Comparison of ALE and SPH Methods for Simulating Mine Blast Effects on Structures
2010-12-01
Explosive Detonation using LS- DYNA3D , ASME 2002, Emerging Technologies in Fluids, Structures, and Fluid/Structure Interactions, PVP-Vol. 446-1. Martec...Airblast Loading Model for DYNA2D and DYNA3D , ARL-TR-1310, Army Research Laboratory, Aberdeen Proving Ground, MD. Slavik T. P. (2009-A). A Coupling...detonation, 7th International LS-DYNA Users Conference. Wang J. (2001). Simulation of Landmine Explosion Using Ls- Dyna3d Software: Benchmark Work of
NASA Astrophysics Data System (ADS)
Soleimani, Meisam; Wriggers, Peter; Rath, Henryke; Stiesch, Meike
2016-10-01
In this paper, a 3D computational model has been developed to investigate biofilms in a multi-physics framework using smoothed particle hydrodynamics (SPH) based on a continuum approach. Biofilm formation is a complex process in the sense that several physical phenomena are coupled and consequently different time-scales are involved. On one hand, biofilm growth is driven by biological reaction and nutrient diffusion and on the other hand, it is influenced by fluid flow causing biofilm deformation and interface erosion in the context of fluid and deformable solid interaction. The geometrical and numerical complexity arising from these phenomena poses serious complications and challenges in grid-based techniques such as finite element. Here the solution is based on SPH as one of the powerful meshless methods. SPH based computational modeling is quite new in the biological community and the method is uniquely robust in capturing the interface-related processes of biofilm formation such as erosion. The obtained results show a good agreement with experimental and published data which demonstrates that the model is capable of simulating and predicting overall spatial and temporal evolution of biofilm.
Escape fraction of ionizing photons from high-redshift galaxies in cosmological SPH simulations
NASA Astrophysics Data System (ADS)
Yajima, Hidenobu; Choi, Jun-Hwan; Nagamine, Kentaro
2011-03-01
Combing the three-dimensional radiative transfer (RT) calculation and cosmological smoothed particle hydrodynamics (SPH) simulations, we study the escape fraction of ionizing photons (fesc) of high-redshift galaxies at z= 3-6. Our simulations cover the halo mass range of Mh= 109-1012 M⊙. We post-process several hundred simulated galaxies with the Authentic Radiative Transfer (ART) code to study the halo mass dependence of fesc. In this paper, we restrict ourselves to the transfer of stellar radiation from local stellar population in each dark matter halo. We find that the average fesc steeply decreases as the halo mass increases, with a large scatter for the lower-mass haloes. The low-mass haloes with Mh˜ 109 M⊙ have large values of fesc (with an average of ˜0.4), whereas the massive haloes with Mh˜ 1011 M⊙ show small values of fesc (with an average of ˜0.07). This is because in our simulations, the massive haloes show more clumpy structure in gas distribution, and the star-forming regions are embedded inside these clumps, making it more difficult for the ionizing photons to escape. On the other hand, in low-mass haloes, there are often conical regions of highly ionized gas due to the shifted location of young star clusters from the centre of dark matter halo, which allows the ionizing photons to escape more easily than in the high-mass haloes. By counting the number of escaped ionizing photons, we show that the star-forming galaxies can ionize the intergalactic medium at z= 3-6. The main contributor to the ionizing photons is the haloes with Mh≲ 1010 M⊙ owing to their high fesc. The large dispersion in fesc suggests that there may be various sizes of H II bubbles around the haloes even with the same mass in the early stages of reionization. We also examine the effect of UV background radiation field on fesc using simple, four different treatments of UV background.
Numerical simulation of rock cutting using 2D AUTODYN
NASA Astrophysics Data System (ADS)
Woldemichael, D. E.; Rani, A. M. Abdul; Lemma, T. A.; Altaf, K.
2015-12-01
In a drilling process for oil and gas exploration, understanding of the interaction between the cutting tool and the rock is important for optimization of the drilling process using polycrystalline diamond compact (PDC) cutters. In this study the finite element method in ANSYS AUTODYN-2D is used to simulate the dynamics of cutter rock interaction, rock failure, and fragmentation. A two-dimensional single PDC cutter and rock model were used to simulate the orthogonal cutting process and to investigate the effect of different parameters such as depth of cut, and back rake angle on two types of rocks (sandstone and limestone). In the simulation, the cutting tool was dragged against stationary rock at predetermined linear velocity and the depth of cut (1,2, and 3 mm) and the back rake angles(-10°, 0°, and +10°) were varied. The simulation result shows that the +10° back rake angle results in higher rate of penetration (ROP). Increasing depth of cut leads to higher ROP at the cost of higher cutting force.
NASA Astrophysics Data System (ADS)
Price, Daniel; Wurster, James; Nixon, Chris
2016-05-01
I will present the capabilities of the Phantom SPH code for global simulations of dust and gas in protoplanetary discs. I will present our new algorithms for simulating both small and large grains in discs, as well as our progress towards simulating evolving grain populations and coupling with radiation. Finally, I will discuss our recent applications to HL Tau and the physics of dust gap opening.
SPH Simulations of Volatiles Loss from Icy Satellites During a Late Heavy Bombardment
NASA Astrophysics Data System (ADS)
Movshovitz, N.; Nimmo, F.; Korycansky, D.; Asphaug, E. I.; Owen, J. M.
2013-12-01
in the size range of interest here requires high resolution hydrodynamical simulations. We use a sophisticated, SPH based code developed by one of the authors [9] and run on hundreds of nodes of the UCSC astrophysical computer cluster to achieve the desired resolution. [1] Nimmo, F., & Korycansky, D. G. (2012), Icarus 219(1), 508-510. [2] Tsiganis, K., Gomes, R., Morbidelli, A., Levison, H.F., 2005, Nature 435, 459-461. [3] Gomes, R., Levison, H.F., Tsiganis, K., Morbidelli, A., 2005, Nature 435, 466-469. [4] Dones, L., & Levison, H. F. (2013), 44th Lunar and Planetary Science Conference ( 2013 ). [5] Zahnle, K.J., Schenk, P., Levison, H.F., Dones, L., 2003, Icarus 163, 263-289. [6] Kraus, R. G., Senft, L. E., & Stewart, S. T. (2011), Icarus, 214(2), 724-738. [7] Dwyer, C. A., Nimmo, F., Ogihara, M., & Ida, S. (2013), Icarus, 225(1), 390-402. [8] Asphaug, E., & Reufer, A. (2013), Icarus, 223(1), 544-565. [9] Owen, J. M., Villumsen, J. V., Shapiro, P. R., & Martel, H. (1998), ApJ Supp, 116, 155
NASA Astrophysics Data System (ADS)
Madura, Thomas; Clementel, Nicola; Kruip, Chael; Icke, Vincent; Gull, Theodore
2014-09-01
We present the first results of full 3D radiative transfer simulations of the colliding stellar winds in a massive binary system. We accomplish this by applying the SIMPLEX algorithm for 3D radiative transfer on an unstructured Delaunay grid to recent 3D smoothed particle hydrodynamics (SPH) simulations of the colliding winds in the binary system η Carinae. We use SIMPLEX to obtain detailed ionization fractions of hydrogen and helium, in 3D, at the resolution of the original SPH simulations. We show how the SIMPLEX simulations can be used to generate synthetic spectral data cubes for comparison to data obtained with the Hubble Space Telescope (HST)/Space Telescope Imaging Spectrograph as part of a multi-cycle program to map changes in η Car's extended interacting wind structures across one binary cycle. Comparison of the HST observations to the SIMPLEX models can help lead to more accurate constraints on the orbital, stellar, and wind parameters of the η Car system, such as the primary's mass-loss rate and the companion's temperature and luminosity. While we initially focus specifically on the η Car binary, the numerical methods employed can be applied to numerous other colliding wind (WR140, WR137, WR19) and dusty 'pinwheel' (WR104, WR98a) binary systems. One of the biggest remaining mysteries is how dust can form and survive in such systems that contain a hot, luminous O star. Coupled with 3D hydrodynamical simulations, SIMPLEX simulations have the potential to help determine the regions where dust can form and survive in these unique objects.
Solar radio emissions: 2D full PIC simulations
NASA Astrophysics Data System (ADS)
Pierre, H.; Sgattoni, A.; Briand, C.; Amiranoff, F.; Riconda, C.
2016-12-01
Solar radio emissions are electromagnetic waves observed at the local plasma frequency and/or at twice the plasma frequency. To describe their origin a multi-stage model has been proposed by Ginzburg & Zhelezniakov (1958) and further developed by several authors, which consider a succession of non-linear three-wave interaction processes. Electron beams accelerated by solar flares travel in the interplanetary plasma and provide the free energy for the development of plasma instabilities. The model describes how part of the free energy of these beams can be transformed in a succession of plasma waves and eventually into electromagnetic waves. Following the work of Thurgood & Tsiklauri (2015) we performed several 2D Particle In Cell simulations. The simulations follow the entire set of processes from the electron beam propagation in the background plasma to the generation of the electromagnetic waves in particular the 2ωp emission, including the excitation of the low frequency waves. As suggested by Thurgood & Tsiklauri (2015) it is possible to identify regimes where the radiation emission can be directly linked to the electron beams. Our attention was devoted to estimate the conversion efficiency from electron kinetic energy to the em energy, and the growth rate of the several processes which can be identified. We studied the emission angles of the 2ωpradiation and compared them with the theoretical predictions of Willes et. al. (1995). We also show the role played by some numerical parameters i.e. the size and shape of the simulation box. This work is the first step to prepare laser-plasma experiments. V. L. Ginzburg, V. V. Zhelezniakov On the Possible Mechanisms of Sporadic Solar Radio Emission (Radiation in an Isotropic Plasma) Soviet Astronomy, Vol. 2, p.653 (1958) J. O. Thurgood and D. Tsiklauri Self-consistent particle-in-cell simulations of funda- mental and harmonic plasma radio emission mechanisms. Astronomy & Astrophysics 584, A83 (2015). A. Willes, P
Simulation of Rio Grande floodplain inundation Using FLO-2D
J. S. O' Brien; W. T. Fullerton
1999-01-01
Spring floodplain inundation is important to the natural functions of the Rio Grande bosque biological community including cottonwood tree germination and recruitment. To predict floodplain inundation, a two-dimensional flood routing model FLO-2D will be applied to various reaches of the Rio Grande. FLO-2D will assess overbank flooding in terms of the area of...
2D and 3D Numerical Simulations of Flux Cancellation
NASA Technical Reports Server (NTRS)
Karpen, Judith T.; DeVore, C.; Antiochos, S. K.; Linton, M. G.
2009-01-01
Cancellation of magnetic flux in the solar photosphere and chromosphere has been linked observationally and theoretically to a broad range of solar activity, from filament channel formation to CME initiation. Because this phenomenon is typically measured at only a single layer in the atmosphere, in the radial (line of sight) component of the magnetic field, the actual processes behind this observational signature are ambiguous. It is clear that reconnection is involved in some way, but the location of the reconnection sites and associated connectivity changes remain uncertain in most cases. We are using numerical modeling to demystify flux cancellation, beginning with the simplest possible configuration: a subphotospheric Lundquist flux tube surrounded by a potential field, immersed in a gravitationally stratified atmosphere, spanning many orders of magnitude in plasma beta. In this system, cancellation is driven slowly by a 2-cell circulation pattern imposed in the convection zone, such that the tops of the cells are located around the beta=1 level (i.e., the photosphere) and the flows converge and form a downdraft at the polarity inversion line; note however that no flow is imposed along the neutral line. We will present the results of 2D and 3D MHD-AMR simulations of flux cancellation, in which the flux at the photosphere begins in either an unsheared or sheared state. In all cases, a low-lying flux rope is formed by reconnection at the polarity inversion line within a few thousand seconds. The flux rope remains stable and does not rise, however, in contrast to models which do not include the presence of significant mass loading.
2D and 3D Numerical Simulations of Flux Cancellation
NASA Technical Reports Server (NTRS)
Karpen, Judith T.; DeVore, C.; Antiochos, S. K.; Linton, M. G.
2009-01-01
Cancellation of magnetic flux in the solar photosphere and chromosphere has been linked observationally and theoretically to a broad range of solar activity, from filament channel formation to CME initiation. Because this phenomenon is typically measured at only a single layer in the atmosphere, in the radial (line of sight) component of the magnetic field, the actual processes behind this observational signature are ambiguous. It is clear that reconnection is involved in some way, but the location of the reconnection sites and associated connectivity changes remain uncertain in most cases. We are using numerical modeling to demystify flux cancellation, beginning with the simplest possible configuration: a subphotospheric Lundquist flux tube surrounded by a potential field, immersed in a gravitationally stratified atmosphere, spanning many orders of magnitude in plasma beta. In this system, cancellation is driven slowly by a 2-cell circulation pattern imposed in the convection zone, such that the tops of the cells are located around the beta=1 level (i.e., the photosphere) and the flows converge and form a downdraft at the polarity inversion line; note however that no flow is imposed along the neutral line. We will present the results of 2D and 3D MHD-AMR simulations of flux cancellation, in which the flux at the photosphere begins in either an unsheared or sheared state. In all cases, a low-lying flux rope is formed by reconnection at the polarity inversion line within a few thousand seconds. The flux rope remains stable and does not rise, however, in contrast to models which do not include the presence of significant mass loading.
A 2D simulation model for urban flood management
NASA Astrophysics Data System (ADS)
Price, Roland; van der Wielen, Jonathan; Velickov, Slavco; Galvao, Diogo
2014-05-01
The European Floods Directive, which came into force on 26 November 2007, requires member states to assess all their water courses and coast lines for risk of flooding, to map flood extents and assets and humans at risk, and to take adequate and coordinated measures to reduce the flood risk in consultation with the public. Flood Risk Management Plans are to be in place by 2015. There are a number of reasons for the promotion of this Directive, not least because there has been much urban and other infrastructural development in flood plains, which puts many at risk of flooding along with vital societal assets. In addition there is growing awareness that the changing climate appears to be inducing more frequent extremes of rainfall with a consequent increases in the frequency of flooding. Thirdly, the growing urban populations in Europe, and especially in the developing countries, means that more people are being put at risk from a greater frequency of urban flooding in particular. There are urgent needs therefore to assess flood risk accurately and consistently, to reduce this risk where it is important to do so or where the benefit is greater than the damage cost, to improve flood forecasting and warning, to provide where necessary (and possible) flood insurance cover, and to involve all stakeholders in decision making affecting flood protection and flood risk management plans. Key data for assessing risk are water levels achieved or forecasted during a flood. Such levels should of course be monitored, but they also need to be predicted, whether for design or simulation. A 2D simulation model (PriceXD) solving the shallow water wave equations is presented specifically for determining flood risk, assessing flood defense schemes and generating flood forecasts and warnings. The simulation model is required to have a number of important properties: -Solve the full shallow water wave equations using a range of possible solutions; -Automatically adjust the time step and
NASA Astrophysics Data System (ADS)
Raymond, Samuel J.; Jones, Bruce; Williams, John R.
2016-12-01
A strategy is introduced to allow coupling of the material point method (MPM) and smoothed particle hydrodynamics (SPH) for numerical simulations. This new strategy partitions the domain into SPH and MPM regions, particles carry all state variables and as such no special treatment is required for the transition between regions. The aim of this work is to derive and validate the coupling methodology between MPM and SPH. Such coupling allows for general boundary conditions to be used in an SPH simulation without further augmentation. Additionally, as SPH is a purely particle method, and MPM is a combination of particles and a mesh. This coupling also permits a smooth transition from particle methods to mesh methods, where further coupling to mesh methods could in future provide an effective farfield boundary treatment for the SPH method. The coupling technique is introduced and described alongside a number of simulations in 1D and 2D to validate and contextualize the potential of using these two methods in a single simulation. The strategy shown here is capable of fully coupling the two methods without any complicated algorithms to transform information from one method to another.
NASA Astrophysics Data System (ADS)
Nakajima, Miki; Stevenson, David J.
2014-05-01
According to the standard giant impact hypothesis, the Moon formed from a partially vaporized disk generated by a collision between the proto-Earth and a Mars-sized impactor. The initial structure of the disk significantly affects the Moon-forming process, including the Moon’s mass, its accretion time scale, and its isotopic similarity to Earth. The dynamics of the impact event determines the initial structure of a nearly hydrostatic Moon-forming disk. However, the hydrostatic and hydrodynamic models have been studied separately and their connection has not previously been well quantified. Here, we show the extent to which the properties of the disk can be inferred from Smoothed Particle Hydrodynamic (SPH) simulations. By using entropy, angular momentum and mass distributions of the SPH outputs as approximately conserved quantities, we compute the two-dimensional disk structure. We investigate four different models: (a) standard, the canonical giant impact model, (b) fast-spinning Earth, a collision between a fast-spinning Earth and a small impactor, (c) sub-Earths, a collision between two objects with half Earth’s mass, and (d) intermediate, a collision of two bodies whose mass ratio is 7:3. Our SPH calculations show that the initial disk has approximately uniform entropy. This is because the materials of different angular momenta are shocked to similar extents. The disks of the fast-spinning Earth and sub-Earths cases are hotter and more vaporized (∼80-90% vapor) than the standard case (∼20%). The intermediate case falls between these values. In the highly vaporized cases, our procedure fails to establish a unique surface density profile of the disk because the disk is unstable according to the Rayleigh criterion (the need for a monotonically increasing specific angular momentum with radius). In these cases, we estimate non-unique disk models by conserving global quantities (mass and total angular momentum). We also develop a semi-analytic model for the
NASA Astrophysics Data System (ADS)
Jutzi, Martin; Benz, Willy; Michel, Patrick
2008-11-01
In this paper, we extend our Smooth Particle Hydrodynamics (SPH) impact code to include the effect of porosity at a sub-resolution scale by adapting the so-called P-alpha model. Many small bodies in the different populations of asteroids and comets are believed to contain a high degree of porosity and the determination of both their collisional evolution and the outcome of their disruption requires that the effect of porosity is taken into account in the computation of those processes. Here, we present our model and show how porosity interfaces with the elastic-perfectly plastic material description and the brittle fracture model generally used to simulate the fragmentation of non-porous rocky bodies. We investigate various compaction models and discuss their suitability to simulate the compaction of (highly) porous material. Then, we perform simple test cases where we compare results of the simulations to the theoretical solutions. We also present a Deep Impact-like simulation to show the effect of porosity on the outcome of an impact. Detailed validation tests will be presented in a next paper by comparison with high-velocity laboratory experiments on porous materials [Jutzi et al., in preparation]. Once validated at small scales, our new impact code can then be used at larger scales to study impacts and collisions involving brittle solids including porosity, such as the parent bodies of C-type asteroid families or cometary materials, both in the strength- and in the gravity-dominated regime.
Polwaththe-Gallage, Hasitha-Nayanajith; Saha, Suvash C; Sauret, Emilie; Flower, Robert; Senadeera, Wijitha; Gu, YuanTong
2016-12-28
Blood continuously flows through the blood vessels in the human body. When blood flows through the smallest blood vessels, red blood cells (RBCs) in the blood exhibit various types of motion and deformed shapes. Computational modelling techniques can be used to successfully predict the behaviour of the RBCs in capillaries. In this study, we report the application of a meshfree particle approach to model and predict the motion and deformation of three-dimensional RBCs in capillaries. An elastic spring network based on the discrete element method (DEM) is employed to model the three-dimensional RBC membrane. The haemoglobin in the RBC and the plasma in the blood are modelled as smoothed particle hydrodynamics (SPH) particles. For validation purposes, the behaviour of a single RBC in a simple shear flow is examined and compared against experimental results. Then simulations are carried out to predict the behaviour of RBCs in a capillary; (i) the motion of five identical RBCs in a uniform capillary, (ii) the motion of five identical RBCs with different bending stiffness (K b ) values in a stenosed capillary, (iii) the motion of three RBCs in a narrow capillary. Finally five identical RBCs are employed to determine the critical diameter of a stenosed capillary. Validation results showed a good agreement with less than 10% difference. From the above simulations, the following results are obtained; (i) RBCs exhibit different deformation behaviours due to the hydrodynamic interaction between them. (ii) Asymmetrical deformation behaviours of the RBCs are clearly observed when the bending stiffness (K b ) of the RBCs is changed. (iii) The model predicts the ability of the RBCs to squeeze through smaller blood vessels. Finally, from the simulations, the critical diameter of the stenosed section to stop the motion of blood flow is predicted. A three-dimensional spring network model based on DEM in combination with the SPH method is successfully used to model the motion and
Breddels, Maarten A.; Helmi, Amina; Vera-Ciro, Carlos
2015-12-01
We compare the dark matter halos’ structural parameters derived for four Milky Way dwarf spheroidal galaxies to those of subhalos found in cosmological N-body simulations. We confirm that estimates of the mass at a single fixed radius are fully consistent with the observations. However, when a second structural parameter such as the logarithmic slope of the dark halo density profile measured close to the half-light radius is included in the comparison, we find little to no overlap between the satellites and the subhalos. Typically the right mass subhalos have steeper profiles at these radii than measurements of the dSph suggest. Using energy arguments we explore if it is possible to solve this discrepancy by invoking baryonic effects. Assuming that feedback from supernovae (SNe) can lead to a reshaping of the halos, we compute the required efficiency and find entirely plausible values for a significant fraction of the subhalos and even as low as 0.1%. This implies that care must be taken not to exaggerate the effect of SNe feedback as this could make the halos too shallow. These results could be used to calibrate and possibly constrain feedback recipes in hydrodynamical simulations.
NASA Technical Reports Server (NTRS)
Jackson, Karen E.; Fuchs, Yvonne T.
2008-01-01
Simulation of multi-terrain impact has been identified as an important research area for improved prediction of rotorcraft crashworthiness within the NASA Subsonic Rotary Wing Aeronautics Program on Rotorcraft Crashworthiness. As part of this effort, two vertical drop tests were conducted of a 5-ft-diameter composite fuselage section into water. For the first test, the fuselage section was impacted in a baseline configuration without energy absorbers. For the second test, the fuselage section was retrofitted with a composite honeycomb energy absorber. Both tests were conducted at a nominal velocity of 25-ft/s. A detailed finite element model was developed to represent each test article and water impact was simulated using both Arbitrary Lagrangian Eulerian (ALE) and Smooth Particle Hydrodynamics (SPH) approaches in LS-DYNA, a nonlinear, explicit transient dynamic finite element code. Analytical predictions were correlated with experimental data for both test configurations. In addition, studies were performed to evaluate the influence of mesh density on test-analysis correlation.
NASA Astrophysics Data System (ADS)
Sivanesapillai, Rakulan; Falkner, Nadine; Hartmaier, Alexander; Steeb, Holger
2016-09-01
We present a conservative smoothed particle hydrodynamics (SPH) model to study the flow of multiple, immiscible fluid phases in porous media using direct pore-scale simulations. Particular focus is put on continuously tracking the evolution of interfacial areas, which are considered to be important morphological quantities affecting multiphase transport in porous media. In addition to solving the Navier-Stokes equations, the model accounts for the effects of capillarity at interfaces and contact lines. This is done by means of incorporating the governing interfacial mass and momentum balances using the continuum surface force (CSF) method, thus rendering model calibration routines unnecessary and minimizing the set of constitutive and kinematic assumptions. We address the application of boundary conditions at rigid solid surfaces and study the predictive capability of the model as well as optimal choices for numerical parameters using an extensive model validation procedure. We demonstrate the applicability of the model to simulate multiphase flows involving partial wettability, dynamic effects, large density ratios (up to 1000), large viscosity ratios (up to 100), as well as fragmentation and coalescence of fluid phases. The model is used to study the evolution of fluid-fluid interfacial areas during saturation-controlled primary drainage and main imbibition of heterogeneous pore spaces at low capillary numbers. A variety of pore-scale effects, such as wetting phase entrapment and fragmentation due to snap-off, are observed. Specific fluid-fluid interfacial area is observed to monotonically increase during primary drainage and hysteretic effects are apparent during main imbibition.
Resolved granular debris-flow simulations with a coupled SPH-DCDEM model
NASA Astrophysics Data System (ADS)
Birjukovs Canelas, Ricardo; Domínguez, José M.; Crespo, Alejandro J. C.; Gómez-Gesteira, Moncho; Ferreira, Rui M. L.
2016-04-01
Debris flows represent some of the most relevant phenomena in geomorphological events. Due to the potential destructiveness of such flows, they are the target of a vast amount of research (Takahashi, 2007 and references therein). A complete description of the internal processes of a debris-flow is however still an elusive achievement, explained by the difficulty of accurately measuring important quantities in these flows and developing a comprehensive, generalized theoretical framework capable of describing them. This work addresses the need for a numerical model applicable to granular-fluid mixtures featuring high spatial and temporal resolution, thus capable of resolving the motion of individual particles, including all interparticle contacts. This corresponds to a brute-force approach: by applying simple interaction laws at local scales the macro-scale properties of the flow should be recovered by upscaling. This methodology effectively bypasses the complexity of modelling the intermediate scales by resolving them directly. The only caveat is the need of high performance computing, a demanding but engaging research challenge. The DualSPHysics meshless numerical implementation, based on Smoothed Particle Hydrodynamics (SPH), is expanded with a Distributed Contact Discrete Element Method (DCDEM) in order to explicitly solve the fluid and the solid phase. The model numerically solves the Navier-Stokes and continuity equations for the liquid phase and Newton's motion equations for solid bodies. The interactions between solids are modelled with classical DEM approaches (Kruggel-Emden et al, 2007). Among other validation tests, an experimental set-up for stony debris flows in a slit check dam is reproduced numerically, where solid material is introduced trough a hopper assuring a constant solid discharge for the considered time interval. With each sediment particle undergoing tens of possible contacts, several thousand time-evolving contacts are efficiently treated
Resolved simulations of a granular-fluid flow through a check dam with a SPH-DCDEM model
NASA Astrophysics Data System (ADS)
Birjukovs Canelas, Ricardo; Domínguez, Jose; Crespo, Alejandro; Gómez-Gesteira, Moncho; Ferreira, Rui M. L.
2017-04-01
Debris flows represent some of the most relevant phenomena in geomorphological events. Due to the potential destructiveness of such flows, they are the target of a vast amount of research. Experimental research in laboratory facilities or in the field is fundamental to characterize the fundamental rheological properties of these flows and to provide insights on its structure. However, characterizing interparticle contacts and the structure of the motion of the granular phase is difficult, even in controlled laboratory conditions, and possible only for simple geometries. This work addresses the need for a numerical simulation tool applicable to granular-fluid mixtures featuring high spatial and temporal resolution, thus capable of resolving the motion of individual particles, including all interparticle contacts and susceptible to complement laboratory research. The DualSPHysics meshless numerical implementation based on Smoothed Particle Hydrodynamics (SPH) is expanded with a Distributed Contact Discrete Element Method (DCDEM) in order to explicitly solve the fluid and the solid phase. The specific objective is to test the SPH-DCDEM approach by comparing its results with experimental data. An experimental set-up for stony debris flows in a slit check dam is reproduced numerically, where solid material is introduced through a hopper assuring a constant solid discharge for the considered time interval. With each sediment particle possibly undergoing several simultaneous contacts, thousands of time-evolving interactions are efficiently treated due to the model's algorithmic structure and the HPC implementation of DualSPHysics. The results, comprising mainly of retention curves, are in good agreement with the measurements, correctly reproducing the changes in efficiency with slit spacing and density. The encouraging results, coupled with the prospect of so far unique insights into the internal dynamics of a debris flow show the potential of high-performance resolved
Reactor2D: A tool for simulation of shock deformation
NASA Astrophysics Data System (ADS)
Kraus, Eugeny I.; Shabalin, Ivan I.
2016-10-01
The basic steps for creating a numerical tool to simulate the deformation and failure processes of complex technical objects (CTO) are presented. Calculations of shock loading of CTO both at low and high speeds, showing the efficiency of the numerical tools created are carried out.
The effect of bed defects on bedform generation - A new approach using the SPH simulation technique
NASA Astrophysics Data System (ADS)
Bartzke, Gerhard; Podszun, Lina; Huhn, Katrin
2014-05-01
Various researchers investigated the initiation of bed forms from a flat sediment bed in aquatic environments using analogue techniques, such as wave tanks or in situ field investigations. Nevertheless, this process particularly the role of major controlling factors is still not fully understood. Prior work has highlighted that the existence of bed defects has the potential to influence the erosion pattern at the surface of sediment beds. In such cases, artificial defects were manufactured in a flat bed and tested under various flow speeds, which resulted in the generation of various bed forms. As bed defects impinge on the in the interior of sediment beds, their effects on fluid flow conditions are difficult to quantify with analogue techniques. To investigate the fluid flow conditions occurring at the direct vicinity and in the interior of a sediment bed, a new 3D-SPH (Smooth Particle Hydrodynamics) numerical 'wave tank', as an alternative to the difficult task of in situ measurement, was used. The model geometry was chosen to mimic typical wave tank dimensions, i.e., X = 2.5 m, Y = 0.35 m, Z = 0.8 m. In order to generate a sediment bed 0.2 m in height, each grain (D50 = 4000 µm) was generated as a fixed particle. Afterwards, the numerical wave tank was flooded with fluid particles. A wave was generated using a vertical paddle accelerated to 0.8 m/s perpendicular to the bed. Six sets of experiments were undertaken with an increasing depth range of bed defects (0.04 - 0.2 m). High resolution flow conditions inside the bed defects as a function of the wave activity were constantly monitored. For estimation of sediment erosion, all measured flow speeds were compared to the Yalin (1972) curve describing transport initiation. The results showed that the fluid velocities in the bed defect increased with increasing bed defect size depth, which was accompanied by an increase of the flow velocities into the pore spaces along the flanks of the defect. With increasing wave
NASA Astrophysics Data System (ADS)
Kordilla, J.; Shigorina, E.; Tartakovsky, A. M.; Pan, W.; Geyer, T.
2015-12-01
Under idealized conditions (smooth surfaces, linear relationship between Bond number and Capillary number of droplets) steady-state flow modes on fracture surfaces have been shown to develop from sliding droplets to rivulets and finally (wavy) film flow, depending on the specified flux. In a recent study we demonstrated the effect of surface roughness on droplet flow in unsaturated wide aperture fractures, however, its effect on other prevailing flow modes is still an open question. The objective of this work is to investigate the formation of complex flow modes on fracture surfaces employing an efficient three-dimensional parallelized SPH model. The model is able to simulate highly intermittent, gravity-driven free-surface flows under dynamic wetting conditions. The effect of surface tension is included via efficient pairwise interaction forces. We validate the model using various analytical and semi-analytical relationships for droplet and complex flow dynamics. To investigate the effect of surface roughness on flow dynamics we construct surfaces with a self-affine fractal geometry and roughness characterized by the Hurst exponent. We demonstrate the effect of surface roughness (on macroscopic scales this can be understood as a tortuosity) on the steady-state distribution of flow modes. Furthermore we show the influence of a wide range of natural wetting conditions (defined by static contact angles) on the final distribution of surface coverage, which is of high importance for matrix-fracture interaction processes.
COYOTE: A computer program for 2-D reactive flow simulations
Cloutman, L.D.
1990-04-01
We describe the numerical algorithm used in the COYOTE two- dimensional, transient, Eulerian hydrodynamics program for reactive flows. The program has a variety of options that provide capabilities for a wide range of applications, and it is designed to be robust and relatively easy to use while maintaining adequate accuracy and efficiency to solve realistic problems. It is based on the ICE method, and it includes a general species and chemical reaction network for simulating reactive flows. It also includes swirl, turbulence transport models, and a nonuniform mesh capability. We describe several applications of the program. 33 refs., 4 figs.
Multiphysics of bone remodeling: A 2D mesoscale activation simulation.
Spingarn, C; Wagner, D; Rémond, Y; George, D
2017-01-01
In this work, we present an evolutive trabecular model for bone remodeling based on a boundary detection algorithm accounting for both biology and applied mechanical forces, known to be an important factor in bone evolution. A finite element (FE) numerical model using the Abaqus/Standard® software was used with a UMAT subroutine to solve the governing coupled mechanical-biological non-linear differential equations of the bone evolution model. The simulations present cell activation on a simplified trabeculae configuration organization with trabecular thickness of 200µm. For this activation process, the results confirm that the trabeculae are mainly oriented in the active direction of the principal mechanical stresses and according to the principal applied mechanical load directions. The trabeculae surface activation is clearly identified and can provide understanding of the different bone cell activations in more complex geometries and load conditions.
Simulation of subgrid orographic precipitation with an embedded 2-D cloud-resolving model
NASA Astrophysics Data System (ADS)
Jung, Joon-Hee; Arakawa, Akio
2016-03-01
By explicitly resolving cloud-scale processes with embedded two-dimensional (2-D) cloud-resolving models (CRMs), superparameterized global atmospheric models have successfully simulated various atmospheric events over a wide range of time scales. Up to now, however, such models have not included the effects of topography on the CRM grid scale. We have used both 3-D and 2-D CRMs to simulate the effects of topography with prescribed "large-scale" winds. The 3-D CRM is used as a benchmark. The results show that the mean precipitation can be simulated reasonably well by using a 2-D representation of topography as long as the statistics of the topography such as the mean and standard deviation are closely represented. It is also shown that the use of a set of two perpendicular 2-D grids can significantly reduce the error due to a 2-D representation of topography.
Representativeness of 2D models to simulate 3D unstable variable density flow in porous media
NASA Astrophysics Data System (ADS)
Knorr, Bastian; Xie, Yueqing; Stumpp, Christine; Maloszewski, Piotr; Simmons, Craig T.
2016-11-01
Variable density flow in porous media has been studied primarily using numerical models because it is a semi-chaotic and transient process. Most of these studies have been 2D, owing to the computational restrictions on 3D simulations, and the ability to observe variable density flow in 2D experimentation. However, it is recognised that variable density flow is a three-dimensional process. A 3D system may cause weaker variable density flow than a 2D system due to stronger dispersion, but may also result in bigger fingers and hence stronger variable density flow because of more space for fingers to coalesce. This study aimed to determine the representativeness of 2D modelling to simulate 3D variable density flow. 3D homogeneous sand column experiments were conducted at three different water flow velocities with three different bromide tracer solutions mixed with methanol resulting in different density ratios. Both 2D axisymmetric and 3D numerical simulations were performed to reproduce experimental data. Experimental results showed that the magnitude of variable density flow increases with decreasing flow rates and decreasing density ratios. The shapes of the observed breakthrough curves differed significantly from those produced by 2D axisymmetric and 3D simulations. Compared to 2D simulations, the onset of instabilities was delayed but the growth was more pronounced in 3D simulations. Despite this difference, both 2D axisymmetric and 3D models successfully simulated mass recovery with high efficiency (between 77% and 99%). This study indicates that 2D simulations are sufficient to understand integrated features of variable density flow in homogeneous sand column experiments.
A simple way to improve AGN feedback prescription in SPH simulations
NASA Astrophysics Data System (ADS)
Zubovas, Kastytis; Bourne, Martin A.; Nayakshin, Sergei
2016-03-01
Active galactic nuclei (AGN) feedback is an important ingredient in galaxy evolution, however its treatment in numerical simulations is necessarily approximate, requiring subgrid prescriptions due to the dynamical range involved in the calculations. We present a suite of smoothed particle hydrodynamics simulations designed to showcase the importance of the choice of a particular subgrid prescription for AGN feedback. We concentrate on two approaches to treating wide-angle AGN outflows: thermal feedback, where thermal and kinetic energy is injected into the gas surrounding the supermassive black hole (SMBH) particle, and virtual particle feedback, where energy is carried by tracer particles radially away from the AGN. We show that the latter model produces a far more complex structure around the SMBH, which we argue is a more physically correct outcome. We suggest a simple improvement to the thermal feedback model - injecting the energy into a cone, rather than spherically symmetrically - and show that this markedly improves the agreement between the two prescriptions, without requiring any noticeable increase in the computational cost of the simulation.
NASA Astrophysics Data System (ADS)
Ghazanfarian, Jafar; Saghatchi, Roozbeh; Gorji-Bandpy, Mofid
2016-08-01
This paper studies a two-dimensional incompressible viscous flow past a circular cylinder with in-line oscillation close to a free-surface. The sub-particle scale (SPS) turbulence model of a Lagrangian particle-based smoothed-particle hydrodynamics (SPH) method has been used to solve the full Navier-Stokes equations together with the continuity equation. The accuracy of numerical code has been verified using two cases consisting of an oscillating cylinder placed in the stationary fluid, and flow over a fixed cylinder close to a free-surface. Simulations are conducted for the Froude number of 0.3, the Reynolds numbers of 40 and 80, various gap ratios for fully-submerged and half-submerge cylinders. The dimensionless frequency and amplitude of oscillating have been chosen as 0.5, 0.8 and 10, 15, respectively. The selection of such a high oscillating frequency causes the flow regime to become turbulent. It is seen that the gap ratio defined as the ratio of cylinder distance from free-surface and its diameter, strongly affects the flow pattern and the magnitude of the drag and lift coefficients. The jet-like flow (the region above the cylinder and beneath the free-surface) creation is discussed in detail and showed that the strength of this jet-like flow is weakened when the gap ratio shrinks. It is seen that by decreasing the gap ratio, the lift and drag coefficients increase and decrease, respectively. It is found that the Reynolds number has an inverse effect on the drag and lift coefficients. Also, it is concluded that by increasing the amplitude of oscillation the drag coefficient increases.
Evolution of Occupant Survivability Simulation Framework Using FEM-SPH Coupling
2011-08-10
Conference (Oral only). • [5] K. Williams, et. al , “Validation of a Loading Model for Simulating Blast Mine Effects on Armoured Vehicles”, 7th...6’ by 6’ plate of 5083-H131 aluminum armor subjected to mine blast • Test plate on support stand with additional mass on top • All other...model positioned over a 3-dimensional mine and a soil area 12 ft by 12 ft • This hull is completely deformable, loading applied by the blast of
Evolution of Occupant Survivability Simulation Framework Using FEM-SPH Coupling
2011-08-01
Congress of the Aeronautical Sciences, Hamburg, Germany, 2006. [13] K. Williams, et. al , “Validation of a Loading Model for Simulating Blast Mine ...structures on water [12]. The empirical Jones-Wilkins-Lee (JWL) equation of state is widely used in mine blast calculations and it is implemented in...experiment, a 182.88cm x 182.88cm (6’ x 6’) plate of Aluminum 5083-H131 armor was subjected to field trials of mine blasts . The main purpose of
2-D simulation of a waveguide free electron laser having a helical undulator
Kim, S.K.; Lee, B.C.; Jeong, Y.U.
1995-12-31
We have developed a 2-D simulation code for the calculation of output power from an FEL oscillator having a helical undulator and a cylindrical waveguide. In the simulation, the current and the energy of the electron beam is 2 A and 400 keV, respectively. The parameters of the permanent-magnet helical undulator are : period = 32 mm, number of periods = 20, magnetic field = 1.3 kG. The gain per pass is 10 and the output power is calculated to be higher than 10 kW The results of the 2-D simulation are compared with those of 1-D simulation.
Cloud angular momentum and effective viscosity in global SPH simulations with feedback
NASA Astrophysics Data System (ADS)
Williamson, David J.; Thacker, Robert J.; Wurster, James; Gibson, Brad K.
2014-08-01
We examine simulations of isolated galaxies to analyse the effects of localized feedback on the formation and evolution of molecular clouds. Feedback contributes to turbulence and the destruction of clouds, leading to a population of clouds that is younger, less massive, and with more retrograde rotation. We investigate the evolution of clouds as they interact with each other and the diffuse interstellar medium, and determine that the role of cloud interactions differs strongly with the presence of feedback: in models without feedback, scattering events dramatically increase the retrograde fraction, but in models with feedback, mergers between clouds may slightly increase the prograde fraction. We also produce an estimate of the viscous time-scale due to cloud-cloud collisions, which increases with increasing strength of feedback (tν ˜ 20 Gyr versus tν ˜ 10 Gyr), but is still much smaller than previous estimates (tν ˜ 1000 Gyr); although collisions become more frequent with feedback, less energy is lost in each collision than in the models without feedback.
NASA Astrophysics Data System (ADS)
Goel, Amit; Montgomery, Michele; Wiegand, Paul
2016-01-01
Accretion disks are ubiquitous in Active Galactic Nuclei, in protostellar systems forming protoplanets, and in close binary star systems such as X-ray binaries, Cataclysmic Variables, and Algols, for example. Observations such as disk tilt are found in all of these different accreting system types, suggesting a common physics must be present. To understand the common connections between these different system types, which can help us understand their unique evolutions, we need to better understand the physics of accretion. For example, viscosity is typically a constant value in the disk of a system that is in a specific state such as a quiescent state. However, viscosity can't be constant throughout the disk, especially at the boundaries. To learn more about viscosity and other common parameters in these disk, we use Bayesian Inference and Markov Chain Monte Carlo techniques to make predictions of events to come in the numerical simulations of these accreting disks. In this work, we present our techniques and initial findings.
SPH Simulations of Direct Impact Accretion in the Ultracompact AM CVn Binaries
NASA Astrophysics Data System (ADS)
Dolence, Joshua; Wood, Matt A.; Silver, Isaac
2008-08-01
The ultracompact binary systems V407 Vul (RX J1914.4+2456) and HM Cnc (RX J0806.3+1527), a two-member subclass of the AM CVn stars, continue to generate interest because they defy unambiguous classification. Three proposed models remain viable at this time, but none of the three are significantly more compelling than the remaining two, and all three can satisfy the observational constraints if parameters in the models are tuned. One of the three proposed models is the direct impact model of Marsh & Steeghs, in which the accretion stream impacts the surface of a rapidly rotating primary white dwarf directly, but at a near-glancing angle. One requirement of this model is that the accretion stream have a high enough density to advect its specific kinetic energy below the photosphere for progressively more thermalized emission downstream, a constraint that requires an accretion spot size of ~1.2 × 105 km2 or smaller. Because we had at hand a smoothed particle hydrodynamics code optimized for cataclysmic variable accretion disk simulations, it was relatively straightforward for us to adapt it to calculate the footprint of the accretion stream at the nominal radius of the primary white dwarf and thus to test this constraint of the direct impact model. We find that the mass flux at the impact spot can be approximated by a bivariate Gaussian with a standard deviation of σphi = 164 km in the orbital plane and σθ = 23 km in the perpendicular direction. The area of the 2 σ ellipse into which ~86% of the mass flux occurs is roughly 47,400 km2, or roughly half the size estimated by Marsh & Steeghs. We discuss the necessary parameters of a simple model of the luminosity distribution in the postimpact emission region.
NASA Astrophysics Data System (ADS)
Ševecek, Pavel; Broz, Miroslav; Nesvorny, David; Durda, Daniel D.; Asphaug, Erik; Walsh, Kevin J.; Richardson, Derek C.
2016-10-01
Detailed models of asteroid collisions can yield important constrains for the evolution of the Main Asteroid Belt, but the respective parameter space is large and often unexplored. We thus performed a new set of simulations of asteroidal breakups, i.e. fragmentations of intact targets, subsequent gravitational reaccumulation and formation of small asteroid families, focusing on parent bodies with diameters D = 10 km.Simulations were performed with a smoothed-particle hydrodynamics (SPH) code (Benz & Asphaug 1994), combined with an efficient N-body integrator (Richardson et al. 2000). We assumed a number of projectile sizes, impact velocities and impact angles. The rheology used in the physical model does not include friction nor crushing; this allows for a direct comparison to results of Durda et al. (2007). Resulting size-frequency distributions are significantly different from scaled-down simulations with D = 100 km monolithic targets, although they may be even more different for pre-shattered targets.We derive new parametric relations describing fragment distributions, suitable for Monte-Carlo collisional models. We also characterize velocity fields and angular distributions of fragments, which can be used as initial conditions in N-body simulations of small asteroid families. Finally, we discuss various uncertainties related to SPH simulations.
2D numerical simulation of the MEP energy-transport model with a finite difference scheme
Romano, V. . E-mail: romano@dmi.unict.it
2007-02-10
A finite difference scheme of Scharfetter-Gummel type is used to simulate a consistent energy-transport model for electron transport in semiconductors devices, free of any fitting parameters, formulated on the basis of the maximum entropy principle. Simulations of silicon n{sup +}-n-n{sup +} diodes, 2D-MESFET and 2D-MOSFET and comparisons with the results obtained by a direct simulation of the Boltzmann transport equation and with other energy-transport models, known in the literature, show the validity of the model and the robustness of the numerical scheme.
Simulation and calculation of particle trapping using a quasistatic 2D simulation code
NASA Astrophysics Data System (ADS)
Morshed, Sepehr; Antonsen, Thomas; Huang, Chengkun; Mori, Warren
2008-11-01
In LWFA schemes the laser pulse must propagate several centimeters and maintain its coherence over this distance, which corresponds to many Rayleigh lengths. These Wakefields and their effect on the laser can be simulated in quasistatic approximation [1, 2]. In this approximation the assumption is that the driver (laser) does not change shape during the time it takes for it to pass by a plasma particle. As a result the particles that are trapped and moving with near-luminal velocity can not be treated with this approximation. Here we have modified the 2D code WAKE with an alternate algorithm so that when a plasma particle gains sufficient energy from wakefields it is promoted to beam particle status which later on may become trapped in the wakefields of laser. Similar implementations have been made in the 3D code QUICKPIC [2]. We also have done comparison between WAKE and results from 200 TW laser simulations using OSIRIS [3]. These changes in WAKE will give users a tool that can be used on a desk top machine to simulate GeV acceleration.[0pt] [1] P. Mora and T. M. Antonsen Jr., Phys Plasma 4, 217 (1997)[0pt] [2] C. Huang et al. Comp Phys. 217 (2006)[0pt] [3] W. Lu et al. PRST, Accelerators and Beams 10, 061301 (2007)
Ihmsen, Markus; Cornelis, Jens; Solenthaler, Barbara; Horvath, Christopher; Teschner, Matthias
2014-03-01
We propose a novel formulation of the projection method for Smoothed Particle Hydrodynamics (SPH). We combine a symmetric SPH pressure force and an SPH discretization of the continuity equation to obtain a discretized form of the pressure Poisson equation (PPE). In contrast to previous projection schemes, our system does consider the actual computation of the pressure force. This incorporation improves the convergence rate of the solver. Furthermore, we propose to compute the density deviation based on velocities instead of positions as this formulation improves the robustness of the time-integration scheme. We show that our novel formulation outperforms previous projection schemes and state-of-the-art SPH methods. Large time steps and small density deviations of down to 0.01 percent can be handled in typical scenarios. The practical relevance of the approach is illustrated by scenarios with up to 40 million SPH particles.
NASA Technical Reports Server (NTRS)
Clementel, N.; Madura, T. I.; Kruip, C.J.H.; Icke, V.; Gull, T. R.
2014-01-01
Eta Carinae is an ideal astrophysical laboratory for studying massive binary interactions and evolution, and stellar wind-wind collisions. Recent three-dimensional (3D) simulations set the stage for understanding the highly complex 3D flows in eta Car. Observations of different broad high- and low-ionization forbidden emission lines provide an excellent tool to constrain the orientation of the system, the primary's mass-loss rate, and the ionizing flux of the hot secondary. In this work we present the first steps towards generating synthetic observations to compare with available and future HST/STIS data. We present initial results from full 3D radiative transfer simulations of the interacting winds in eta Car.We use the SimpleX algorithm to post-process the output from 3D SPH simulations and obtain the ionization fractions of hydrogen and helium assuming three different mass-loss rates for the primary star. The resultant ionization maps of both species constrain the regions where the observed forbidden emission lines can form. Including collisional ionization is necessary to achieve a better description of the ionization states, especially in the areas shielded from the secondary's radiation. We find that reducing the primary's mass-loss rate increases the volume of ionized gas, creating larger areas where the forbidden emission lines can form.We conclude that post processing 3D SPH data with SimpleX is a viable tool to create ionization maps for eta Car.
NASA Technical Reports Server (NTRS)
Clementel, N.; Madura, T. I.; Kruip, C. J. H.; Icke, V.; Gull, T. R.
2014-01-01
Eta Carinae is an ideal astrophysical laboratory for studying massive binary interactions and evolution, and stellar wind-wind collisions. Recent three-dimensional (3D) simulations set the stage for understanding the highly complex 3D flows in Eta Car. Observations of different broad high- and low-ionization forbidden emission lines provide an excellent tool to constrain the orientation of the system, the primary's mass-loss rate, and the ionizing flux of the hot secondary. In this work we present the first steps towards generating synthetic observations to compare with available and future HST/STIS data. We present initial results from full 3D radiative transfer simulations of the interacting winds in Eta Car. We use the SimpleX algorithm to post-process the output from 3D SPH simulations and obtain the ionization fractions of hydrogen and helium assuming three different mass-loss rates for the primary star. The resultant ionization maps of both species constrain the regions where the observed forbidden emission lines can form. Including collisional ionization is necessary to achieve a better description of the ionization states, especially in the areas shielded from the secondary's radiation. We find that reducing the primary's mass-loss rate increases the volume of ionized gas, creating larger areas where the forbidden emission lines can form. We conclude that post processing 3D SPH data with SimpleX is a viable tool to create ionization maps for Eta Car.
A 2D spring model for the simulation of ultrasonic wave propagation in nonlinear hysteretic media.
Delsanto, P P; Gliozzi, A S; Hirsekorn, M; Nobili, M
2006-07-01
A two-dimensional (2D) approach to the simulation of ultrasonic wave propagation in nonclassical nonlinear (NCNL) media is presented. The approach represents the extension to 2D of a previously proposed one dimensional (1D) Spring Model, with the inclusion of a PM space treatment of the intersticial regions between grains. The extension to 2D is of great practical relevance for its potential applications in the field of quantitative nondestructive evaluation and material characterization, but it is also useful, from a theoretical point of view, to gain a better insight of the interaction mechanisms involved. The model is tested by means of virtual 2D experiments. The expected NCNL behaviors are qualitatively well reproduced.
The simulation of 3D microcalcification clusters in 2D digital mammography and breast tomosynthesis
Shaheen, Eman; Van Ongeval, Chantal; Zanca, Federica; Cockmartin, Lesley; Marshall, Nicholas; Jacobs, Jurgen; Young, Kenneth C.; Dance, David R.; Bosmans, Hilde
2011-12-15
Purpose: This work proposes a new method of building 3D models of microcalcification clusters and describes the validation of their realistic appearance when simulated into 2D digital mammograms and into breast tomosynthesis images. Methods: A micro-CT unit was used to scan 23 breast biopsy specimens of microcalcification clusters with malignant and benign characteristics and their 3D reconstructed datasets were segmented to obtain 3D models of microcalcification clusters. These models were then adjusted for the x-ray spectrum used and for the system resolution and simulated into 2D projection images to obtain mammograms after image processing and into tomographic sequences of projection images, which were then reconstructed to form 3D tomosynthesis datasets. Six radiologists were asked to distinguish between 40 real and 40 simulated clusters of microcalcifications in two separate studies on 2D mammography and tomosynthesis datasets. Receiver operating characteristic (ROC) analysis was used to test the ability of each observer to distinguish between simulated and real microcalcification clusters. The kappa statistic was applied to assess how often the individual simulated and real microcalcification clusters had received similar scores (''agreement'') on their realistic appearance in both modalities. This analysis was performed for all readers and for the real and the simulated group of microcalcification clusters separately. ''Poor'' agreement would reflect radiologists' confusion between simulated and real clusters, i.e., lesions not systematically evaluated in both modalities as either simulated or real, and would therefore be interpreted as a success of the present models. Results: The area under the ROC curve, averaged over the observers, was 0.55 (95% confidence interval [0.44, 0.66]) for the 2D study, and 0.46 (95% confidence interval [0.29, 0.64]) for the tomosynthesis study, indicating no statistically significant difference between real and simulated
The simulation of 3D microcalcification clusters in 2D digital mammography and breast tomosynthesis.
Shaheen, Eman; Van Ongeval, Chantal; Zanca, Federica; Cockmartin, Lesley; Marshall, Nicholas; Jacobs, Jurgen; Young, Kenneth C; R Dance, David; Bosmans, Hilde
2011-12-01
This work proposes a new method of building 3D models of microcalcification clusters and describes the validation of their realistic appearance when simulated into 2D digital mammograms and into breast tomosynthesis images. A micro-CT unit was used to scan 23 breast biopsy specimens of microcalcification clusters with malignant and benign characteristics and their 3D reconstructed datasets were segmented to obtain 3D models of microcalcification clusters. These models were then adjusted for the x-ray spectrum used and for the system resolution and simulated into 2D projection images to obtain mammograms after image processing and into tomographic sequences of projection images, which were then reconstructed to form 3D tomosynthesis datasets. Six radiologists were asked to distinguish between 40 real and 40 simulated clusters of microcalcifications in two separate studies on 2D mammography and tomosynthesis datasets. Receiver operating characteristic (ROC) analysis was used to test the ability of each observer to distinguish between simulated and real microcalcification clusters. The kappa statistic was applied to assess how often the individual simulated and real microcalcification clusters had received similar scores ("agreement") on their realistic appearance in both modalities. This analysis was performed for all readers and for the real and the simulated group of microcalcification clusters separately. "Poor" agreement would reflect radiologists' confusion between simulated and real clusters, i.e., lesions not systematically evaluated in both modalities as either simulated or real, and would therefore be interpreted as a success of the present models. The area under the ROC curve, averaged over the observers, was 0.55 (95% confidence interval [0.44, 0.66]) for the 2D study, and 0.46 (95% confidence interval [0.29, 0.64]) for the tomosynthesis study, indicating no statistically significant difference between real and simulated lesions (p > 0.05). Agreement
2D Mesoscale Simulations of Quasielastic Reloading and Unloading in Shock Compressed Aluminum
NASA Astrophysics Data System (ADS)
Dwivedi, S. K.
2007-06-01
2D mesoscale simulations of planar shock compression, followed by either reloading or unloading, are presented that predict quasi-elastic (QE) response observed experimentally in shocked polycrystalline aluminum. The representative volume element (RVE) of the plate impact experiments included a realistic representation of a grain ensemble with apparent heterogeneities in the polycrystalline sample. Simulations were carried out using a 2D updated Lagrangian finite element code ISP-TROTP incorporating elastic-plastic deformation in grain interior and contact/cohesive methodology to analyze finite strength grain boundaries. Local heterogeneous response was quantified by calculating appropriate material variables along in-situ Lagrangian tracer lines and comparing the temporal variation of their mean values with results from 2D continuum simulations. Simulations were carried out by varying a large number of individual heterogeneities to predict QE response on reloading and unloading from shock state. The heterogeneities important for simulating the QE response identified from these simulations were: hardened grain boundaries, hard inclusions, and micro-porosity. It is shown that the shock-deformed state of polycrystalline aluminum in the presence of these effects is strongly heterogeneous with considerable variations in lateral stresses. This distributed stress state unloads the shear stress from flow stress causing QE response on reloading as well as unloading. The simulated velocity profiles and calculated shear strength and shear stresses for a representative reloading and unloading experimental configuration were found to agree well with the reported experimental data. Work supported by DOE.
NASA Astrophysics Data System (ADS)
Sirait, S. H.; Edison, R. E.; Baidillah, M. R.; Taruno, W. P.; Haryanto, F.
2016-08-01
The aim of this study is to simulate the potential distribution of 2D brain geometry based on two electrodes ECVT. ECVT (electrical capacitance tomography) is a tomography modality which produces dielectric distribution image of a subject from several capacitance electrodes measurements. This study begins by producing the geometry of 2D brain based on MRI image and then setting the boundary conditions on the boundaries of the geometry. The values of boundary conditions follow the potential values used in two electrodes brain ECVT, and for this reason the first boundary is set to 20 volt and 2.5 MHz signal and another boundary is set to ground. Poisson equation is implemented as the governing equation in the 2D brain geometry and finite element method is used to solve the equation. Simulated Hodgkin-Huxley action potential is applied as disturbance potential in the geometry. We divide this study into two which comprises simulation without disturbance potential and simulation with disturbance potential. From this study, each of time dependent potential distributions from non-disturbance and disturbance potential of the 2D brain geometry has been generated.
Simulation of 2D NMR Spectra of Carbohydrates Using GODESS Software.
Kapaev, Roman R; Toukach, Philip V
2016-06-27
Glycan Optimized Dual Empirical Spectrum Simulation (GODESS) is a web service, which has been recently shown to be one of the most accurate tools for simulation of (1)H and (13)C 1D NMR spectra of natural carbohydrates and their derivatives. The new version of GODESS supports visualization of the simulated (1)H and (13)C chemical shifts in the form of most 2D spin correlation spectra commonly used in carbohydrate research, such as (1)H-(1)H TOCSY, COSY/COSY-DQF/COSY-RCT, and (1)H-(13)C edHSQC, HSQC-COSY, HSQC-TOCSY, and HMBC. Peaks in the simulated 2D spectra are color-coded and labeled according to the signal assignment and can be exported in JCAMP-DX format. Peak widths are estimated empirically from the structural features. GODESS is available free of charge via the Internet at the platform of the Carbohydrate Structure Database project ( http://csdb.glycoscience.ru ).
Rise time of proton cut-off energy in 2D and 3D PIC simulations
NASA Astrophysics Data System (ADS)
Babaei, J.; Gizzi, L. A.; Londrillo, P.; Mirzanejad, S.; Rovelli, T.; Sinigardi, S.; Turchetti, G.
2017-04-01
The Target Normal Sheath Acceleration regime for proton acceleration by laser pulses is experimentally consolidated and fairly well understood. However, uncertainties remain in the analysis of particle-in-cell simulation results. The energy spectrum is exponential with a cut-off, but the maximum energy depends on the simulation time, following different laws in two and three dimensional (2D, 3D) PIC simulations so that the determination of an asymptotic value has some arbitrariness. We propose two empirical laws for the rise time of the cut-off energy in 2D and 3D PIC simulations, suggested by a model in which the proton acceleration is due to a surface charge distribution on the target rear side. The kinetic energy of the protons that we obtain follows two distinct laws, which appear to be nicely satisfied by PIC simulations, for a model target given by a uniform foil plus a contaminant layer that is hydrogen-rich. The laws depend on two parameters: the scaling time, at which the energy starts to rise, and the asymptotic cut-off energy. The values of the cut-off energy, obtained by fitting 2D and 3D simulations for the same target and laser pulse configuration, are comparable. This suggests that parametric scans can be performed with 2D simulations since 3D ones are computationally very expensive, delegating their role only to a correspondence check. In this paper, the simulations are carried out with the PIC code ALaDyn by changing the target thickness L and the incidence angle α, with a fixed a0 = 3. A monotonic dependence, on L for normal incidence and on α for fixed L, is found, as in the experimental results for high temporal contrast pulses.
Transverse instability of electron plasma waves study via direct 2 +2D Vlasov simulations
NASA Astrophysics Data System (ADS)
Silantyev, Denis; Lushnikov, Pavel; Rose, Harvey
2016-10-01
Transverse instability can be viewed as initial stage of electron plasma waves (EPWs) filamentation. We performed direct 2 +2D Vlasov-Poisson simulations of collisionless plasma to systematically study the growth rates of oblique modes of finite-amplitude EPW depending on its amplitude, wavenumber, angle of the oblique mode wavevector relative to the EPW's wavevector and the configuration of the trapped electrons in the EPW. Simulation results are compared to the predictions of theoretical models.
2-D MHD numerical simulations of EML plasma armatures with ablation
NASA Astrophysics Data System (ADS)
Boynton, G. C.; Huerta, M. A.; Thio, Y. C.
1993-01-01
We use a 2-D) resistive MHD code to simulate an EML plasma armature. The energy equation includes Ohmic heating, radiation heat transport and the ideal gas equation of state, allowing for variable ionization using the Saha equations. We calculate rail ablation taking into account the flow of heat into the interior of the rails. Our simulations show the development of internal convective flows and secondary arcs. We use an explicit Flux Corrected Transport algorithm to advance all quantities in time.
NASA Astrophysics Data System (ADS)
Douillet-Grellier, Thomas; Pramanik, Ranjan; Pan, Kai; Albaiz, Abdulaziz; Jones, Bruce D.; Williams, John R.
2016-10-01
This paper develops a method for imposing stress boundary conditions in smoothed particle hydrodynamics (SPH) with and without the need for dummy particles. SPH has been used for simulating phenomena in a number of fields, such as astrophysics and fluid mechanics. More recently, the method has gained traction as a technique for simulation of deformation and fracture in solids, where the meshless property of SPH can be leveraged to represent arbitrary crack paths. Despite this interest, application of boundary conditions within the SPH framework is typically limited to imposed velocity or displacement using fictitious dummy particles to compensate for the lack of particles beyond the boundary interface. While this is enough for a large variety of problems, especially in the case of fluid flow, for problems in solid mechanics there is a clear need to impose stresses upon boundaries. In addition to this, the use of dummy particles to impose a boundary condition is not always suitable or even feasibly, especially for those problems which include internal boundaries. In order to overcome these difficulties, this paper first presents an improved method for applying stress boundary conditions in SPH with dummy particles. This is then followed by a proposal of a formulation which does not require dummy particles. These techniques are then validated against analytical solutions to two common problems in rock mechanics, the Brazilian test and the penny-shaped crack problem both in 2D and 3D. This study highlights the fact that SPH offers a good level of accuracy to solve these problems and that results are reliable. This validation work serves as a foundation for addressing more complex problems involving plasticity and fracture propagation.
The simulation of 3D mass models in 2D digital mammography and breast tomosynthesis
Shaheen, Eman De Keyzer, Frederik; Bosmans, Hilde; Ongeval, Chantal Van; Dance, David R.; Young, Kenneth C.
2014-08-15
Purpose: This work proposes a new method of building 3D breast mass models with different morphological shapes and describes the validation of the realism of their appearance after simulation into 2D digital mammograms and breast tomosynthesis images. Methods: Twenty-five contrast enhanced MRI breast lesions were collected and each mass was manually segmented in the three orthogonal views: sagittal, coronal, and transversal. The segmented models were combined, resampled to have isotropic voxel sizes, triangularly meshed, and scaled to different sizes. These masses were referred to as nonspiculated masses and were then used as nuclei onto which spicules were grown with an iterative branching algorithm forming a total of 30 spiculated masses. These 55 mass models were projected into 2D projection images to obtain mammograms after image processing and into tomographic sequences of projection images, which were then reconstructed to form 3D tomosynthesis datasets. The realism of the appearance of these mass models was assessed by five radiologists via receiver operating characteristic (ROC) analysis when compared to 54 real masses. All lesions were also given a breast imaging reporting and data system (BIRADS) score. The data sets of 2D mammography and tomosynthesis were read separately. The Kendall's coefficient of concordance was used for the interrater observer agreement assessment for the BIRADS scores per modality. Further paired analysis, using the Wilcoxon signed rank test, of the BIRADS assessment between 2D and tomosynthesis was separately performed for the real masses and for the simulated masses. Results: The area under the ROC curves, averaged over all observers, was 0.54 (95% confidence interval [0.50, 0.66]) for the 2D study, and 0.67 (95% confidence interval [0.55, 0.79]) for the tomosynthesis study. According to the BIRADS scores, the nonspiculated and the spiculated masses varied in their degrees of malignancy from normal (BIRADS 1) to highly
The simulation of 3D mass models in 2D digital mammography and breast tomosynthesis.
Shaheen, Eman; De Keyzer, Frederik; Bosmans, Hilde; Dance, David R; Young, Kenneth C; Van Ongeval, Chantal
2014-08-01
This work proposes a new method of building 3D breast mass models with different morphological shapes and describes the validation of the realism of their appearance after simulation into 2D digital mammograms and breast tomosynthesis images. Twenty-five contrast enhanced MRI breast lesions were collected and each mass was manually segmented in the three orthogonal views: sagittal, coronal, and transversal. The segmented models were combined, resampled to have isotropic voxel sizes, triangularly meshed, and scaled to different sizes. These masses were referred to as nonspiculated masses and were then used as nuclei onto which spicules were grown with an iterative branching algorithm forming a total of 30 spiculated masses. These 55 mass models were projected into 2D projection images to obtain mammograms after image processing and into tomographic sequences of projection images, which were then reconstructed to form 3D tomosynthesis datasets. The realism of the appearance of these mass models was assessed by five radiologists via receiver operating characteristic (ROC) analysis when compared to 54 real masses. All lesions were also given a breast imaging reporting and data system (BIRADS) score. The data sets of 2D mammography and tomosynthesis were read separately. The Kendall's coefficient of concordance was used for the interrater observer agreement assessment for the BIRADS scores per modality. Further paired analysis, using the Wilcoxon signed rank test, of the BIRADS assessment between 2D and tomosynthesis was separately performed for the real masses and for the simulated masses. The area under the ROC curves, averaged over all observers, was 0.54 (95% confidence interval [0.50, 0.66]) for the 2D study, and 0.67 (95% confidence interval [0.55, 0.79]) for the tomosynthesis study. According to the BIRADS scores, the nonspiculated and the spiculated masses varied in their degrees of malignancy from normal (BIRADS 1) to highly suggestive for malignancy (BIRADS 5
2D-3D hybrid stabilized finite element method for tsunami runup simulations
NASA Astrophysics Data System (ADS)
Takase, S.; Moriguchi, S.; Terada, K.; Kato, J.; Kyoya, T.; Kashiyama, K.; Kotani, T.
2016-09-01
This paper presents a two-dimensional (2D)-three-dimensional (3D) hybrid stabilized finite element method that enables us to predict a propagation process of tsunami generated in a hypocentral region, which ranges from offshore propagation to runup to urban areas, with high accuracy and relatively low computational costs. To be more specific, the 2D shallow water equation is employed to simulate the propagation of offshore waves, while the 3D Navier-Stokes equation is employed for the runup in urban areas. The stabilized finite element method is utilized for numerical simulations for both of the 2D and 3D domains that are independently discretized with unstructured meshes. The multi-point constraint and transmission methods are applied to satisfy the continuity of flow velocities and pressures at the interface between the resulting 2D and 3D meshes, since neither their spatial dimensions nor node arrangements are consistent. Numerical examples are presented to demonstrate the performance of the proposed hybrid method to simulate tsunami behavior, including offshore propagation and runup to urban areas, with substantially lower computation costs in comparison with full 3D computations.
PFC2D simulation of thermally induced cracks in concrete specimens
NASA Astrophysics Data System (ADS)
Liu, Xinghong; Chang, Xiaolin; Zhou, Wei; Li, Shuirong
2013-06-01
The appearance of cracks exposed to severe environmental conditions can be critical for concrete structures. The research is to validate Particle Flow Code(PFC2D) method in the context of concrete thermally-induced cracking simulations. First, concrete was discreted as meso-level units of aggregate, cement mortar and the interfaces between them. Parallel bonded-particle model in PFC2D was adapted to describe the constitutive relation of the cementing material. Then, the concrete mechanics meso-parameters were obtained through several groups of biaxial tests, in order to make the numerical results comply with the law of the indoor test. The concrete thermal meso-parameters were determined by compared with the parameters in the empirical formula through the simulations imposing a constant heat flow to the left margin of concrete specimens. At last, a case of 1000mm×500mm concrete specimen model was analyzed. It simulated the formation and development process of the thermally-induced cracks under the cold waves of different durations and temperature decline. Good agreements in fracture morphology and process were observed between the simulations, previous studies and laboratory data. The temperature decline limits during cold waves were obtained when its tensile strength was given as 3MPa. And it showed the feasibility of using PFC2D to simulate concrete thermally-induced cracking.
FRANC2D: A two-dimensional crack propagation simulator. Version 2.7: User's guide
NASA Technical Reports Server (NTRS)
Wawrzynek, Paul; Ingraffea, Anthony
1994-01-01
FRANC 2D (FRacture ANalysis Code, 2 Dimensions) is a menu driven, interactive finite element computer code that performs fracture mechanics analyses of 2-D structures. The code has an automatic mesh generator for triangular and quadrilateral elements. FRANC2D calculates the stress intensity factor using linear elastic fracture mechanics and evaluates crack extension using several methods that may be selected by the user. The code features a mesh refinement and adaptive mesh generation capability that is automatically developed according to the predicted crack extension direction and length. The code also has unique features that permit the analysis of layered structure with load transfer through simulated mechanical fasteners or bonded joints. The code was written for UNIX workstations with X-windows graphics and may be executed on the following computers: DEC DecStation 3000 and 5000 series, IBM RS/6000 series, Hewlitt-Packard 9000/700 series, SUN Sparc stations, and most Silicon Graphics models.
Simulation of Cardiac Arrhythmias Using a 2D Heterogeneous Whole Heart Model.
Balakrishnan, Minimol; Chakravarthy, V Srinivasa; Guhathakurta, Soma
2015-01-01
Simulation studies of cardiac arrhythmias at the whole heart level with electrocardiogram (ECG) gives an understanding of how the underlying cell and tissue level changes manifest as rhythm disturbances in the ECG. We present a 2D whole heart model (WHM2D) which can accommodate variations at the cellular level and can generate the ECG waveform. It is shown that, by varying cellular-level parameters like the gap junction conductance (GJC), excitability, action potential duration (APD) and frequency of oscillations of the auto-rhythmic cell in WHM2D a large variety of cardiac arrhythmias can be generated including sinus tachycardia, sinus bradycardia, sinus arrhythmia, sinus pause, junctional rhythm, Wolf Parkinson White syndrome and all types of AV conduction blocks. WHM2D includes key components of the electrical conduction system of the heart like the SA (Sino atrial) node cells, fast conducting intranodal pathways, slow conducting atriovenctricular (AV) node, bundle of His cells, Purkinje network, atrial, and ventricular myocardial cells. SA nodal cells, AV nodal cells, bundle of His cells, and Purkinje cells are represented by the Fitzhugh-Nagumo (FN) model which is a reduced model of the Hodgkin-Huxley neuron model. The atrial and ventricular myocardial cells are modeled by the Aliev-Panfilov (AP) two-variable model proposed for cardiac excitation. WHM2D can prove to be a valuable clinical tool for understanding cardiac arrhythmias.
Simulation of Cardiac Arrhythmias Using a 2D Heterogeneous Whole Heart Model
Balakrishnan, Minimol; Chakravarthy, V. Srinivasa; Guhathakurta, Soma
2015-01-01
Simulation studies of cardiac arrhythmias at the whole heart level with electrocardiogram (ECG) gives an understanding of how the underlying cell and tissue level changes manifest as rhythm disturbances in the ECG. We present a 2D whole heart model (WHM2D) which can accommodate variations at the cellular level and can generate the ECG waveform. It is shown that, by varying cellular-level parameters like the gap junction conductance (GJC), excitability, action potential duration (APD) and frequency of oscillations of the auto-rhythmic cell in WHM2D a large variety of cardiac arrhythmias can be generated including sinus tachycardia, sinus bradycardia, sinus arrhythmia, sinus pause, junctional rhythm, Wolf Parkinson White syndrome and all types of AV conduction blocks. WHM2D includes key components of the electrical conduction system of the heart like the SA (Sino atrial) node cells, fast conducting intranodal pathways, slow conducting atriovenctricular (AV) node, bundle of His cells, Purkinje network, atrial, and ventricular myocardial cells. SA nodal cells, AV nodal cells, bundle of His cells, and Purkinje cells are represented by the Fitzhugh-Nagumo (FN) model which is a reduced model of the Hodgkin-Huxley neuron model. The atrial and ventricular myocardial cells are modeled by the Aliev-Panfilov (AP) two-variable model proposed for cardiac excitation. WHM2D can prove to be a valuable clinical tool for understanding cardiac arrhythmias. PMID:26733873
NASA Technical Reports Server (NTRS)
Tang, H. T.; Hofmann, R.; Yee, G.; Vaughan, D. K.
1980-01-01
Transient, nonlinear soil-structure interaction simulations of an Electric Power Research Institute, SIMQUAKE experiment were performed using the large strain, time domain STEALTH 2D code and a cyclic, kinematically hardening cap soil model. Results from the STEALTH simulations were compared to identical simulations performed with the TRANAL code and indicate relatively good agreement between all the STEALTH and TRANAL calculations. The differences that are seen can probably be attributed to: (1) large (STEALTH) vs. small (TRANAL) strain formulation and/or (2) grid discretization differences.
Momentum Transport: 2D and 3D Cloud Resolving Model Simulations
NASA Technical Reports Server (NTRS)
Tao, Wei-Kuo
2001-01-01
The major objective of this study is to investigate the momentum budgets associated with several convective systems that developed during the TOGA COARE IOP (west Pacific warm pool region) and GATE (east Atlantic region). The tool for this study is the improved Goddard Cumulas Ensemble (GCE) model which includes a 3-class ice-phase microphysical scheme, explicit cloud radiative interactive processes and air-sea interactive surface processes. The model domain contains 256 x 256 grid points (with 2 km resolution) in the horizontal and 38 grid points (to a depth of 22 km) in the vertical. The 2D domain has 1024 grid points. The simulations were performed over a 7-day time period (December 19-26, 1992, for TOGA COARE and September 1-7, 1994 for GATE). Cyclic literal boundary conditions are required for this type of long-term integration. Two well organized squall systems (TOGA, COARE February 22, 1993, and GATE September 12, 1994) were also simulated using the 3D GCE model. Only 9 h simulations were required to cover the life time of the squall systems. the lateral boundary conditions were open for these two squall systems simulations. the following will be examined: (1) the momentum budgets in the convective and stratiform regions, (2) the relationship between momentum transport and cloud organization (i.e., well organized squall lines versus less organized convective), (3) the differences and similarities in momentum transport between 2D and 3D simulated convective systems, and (4) the differences and similarities in momentum budgets between cloud systems simulated with open and cyclic lateral boundary conditions. Preliminary results indicate that there are only small differences between 2D and 3D simulated momentum budgets. Major differences occur, however, between momentum budgets associated with squall systems simulated using different lateral boundary conditions.
Long ranged interactions in computer simulations and for quasi-2D systems
NASA Astrophysics Data System (ADS)
Mazars, Martial
2011-03-01
Taking correctly into account long ranged interactions in molecular simulations of molecular models based on classical atomistic representations are essential to obtain reliable results on model systems and in simulations of biological systems. A lot of numerical methods have been developed to this end; the most important of them are reviewed in this paper. Particular attention is paid to the analytical relations between the methods, this allows comparisons on efficiency and accuracy between them and also to proceed to precise implementations of these techniques. While most of the methods have been developed for Coulomb interactions, we give also some analytical details to apply these methods to screened Coulomb (Yukawa interactions), inverse power law and dipolar interactions. Particular types of systems, the quasi-2D systems, are also considered in this paper. Quasi-2D systems represent a large class of physical systems where the spatial extension in one direction of the space is very small by comparison to the other two. These representations are very useful to describe the properties of interfaces, surfaces, fluids confined in slab geometry, etc. In computer simulations, these systems are studied with partial periodic boundary conditions: periodic boundary conditions are taken in directions where spatial extensions are large and some other boundary conditions are taken in directions with smaller extensions. In this review, we describe also the numerical methods developed to handle long ranged interactions in numerical simulations of quasi-2D systems. The properties of quasi-2D systems depend strongly on interactions between components; more specifically electrostatic and magnetic interactions and interactions with external fields are of particular interest in these systems.
Numerical simulation of Flow Pressure Drop and Friction Factor of Water in 2D channel
NASA Astrophysics Data System (ADS)
Aya Baquero, H.; Camargo Casallas, L. H.
2017-01-01
The paper presents the results obtained from the numerical study of the dynamic properties of a straight channel 50 mm long and 780 μm wide on a 2D model. Numerical simulations were performed by using Navier-Stokes equation. The results showed a good agreement with experiments and other models. Pressure drop and friction factor of water in the channel in the studied ranges of Reynolds number are due to viscosity effects.
Modeling and 2-D discrete simulation of dislocation dynamics for plastic deformation of metal
NASA Astrophysics Data System (ADS)
Liu, Juan; Cui, Zhenshan; Ou, Hengan; Ruan, Liqun
2013-05-01
Two methods are employed in this paper to investigate the dislocation evolution during plastic deformation of metal. One method is dislocation dynamic simulation of two-dimensional discrete dislocation dynamics (2D-DDD), and the other is dislocation dynamics modeling by means of nonlinear analysis. As screw dislocation is prone to disappear by cross-slip, only edge dislocation is taken into account in simulation. First, an approach of 2D-DDD is used to graphically simulate and exhibit the collective motion of a large number of discrete dislocations. In the beginning, initial grains are generated in the simulation cells according to the mechanism of grain growth and the initial dislocation is randomly distributed in grains and relaxed under the internal stress. During the simulation process, the externally imposed stress, the long range stress contribution of all dislocations and the short range stress caused by the grain boundaries are calculated. Under the action of these forces, dislocations begin to glide, climb, multiply, annihilate and react with each other. Besides, thermal activation process is included. Through the simulation, the distribution of dislocation and the stress-strain curves can be obtained. On the other hand, based on the classic dislocation theory, the variation of the dislocation density with time is described by nonlinear differential equations. Finite difference method (FDM) is used to solve the built differential equations. The dislocation evolution at a constant strain rate is taken as an example to verify the rationality of the model.
Extensible, Reusable, and Reproducible Computing: A Case Study of PySPH
NASA Astrophysics Data System (ADS)
Ramachandran, Prabhu
2016-10-01
In this work, the Smoothed Particle Hydrodynamics (SPH) technique is considered as an example of a typical computational research area. PySPH is an open source framework for SPH computations. PySPH is designed to be easy to use. The framework allows a user to implement an entire simulation in pure Python. It is designed to make it easy for scientists to reuse their code and extend the work of others. These important features allow PySPH to facilitate reproducible computational research. Based on the experience with PySPH, general recommendations are suggested for other computational researchers.
Penetration of tungsten-alloy rods into composite ceramic targets: Experiments and 2-D simulations
NASA Astrophysics Data System (ADS)
Rosenberg, Z.; Dekel, E.; Hohler, V.; Stilp, A. J.; Weber, K.
1998-07-01
A series of terminal ballistics experiments, with scaled tungsten-alloy penetrators, was performed on composite targets consisting of ceramic tiles glued to thick steel backing plates. Tiles of silicon-carbide, aluminum nitride, titanium-dibroide and boron-carbide were 20-80 mm thick, and impact velocity was 1.7 km/s. 2-D numerical simulations, using the PISCES code, were performed in order to simulate these shots. It is shown that a simplified version of the Johnson-Holmquist failure model can account for the penetration depths of the rods but is not enough to capture the effect of lateral release waves on these penetrations.
2-D and 3-D PIC simulations of a SLAC Klystrino
NASA Astrophysics Data System (ADS)
Spencer, Thomas; Luginsland, John; Hackett, Kirk; Haworth, Michael; Song, Liqun; Scheitrum, Glenn
2000-10-01
The Air Force Research Laboratory is collaborating with the Stanford Linear Accelerator Center in performing 3-D PIC simulations using ARGUS and ICEPIC on a klystrino with the following parameters: voltage of 110 kV, current of 2.4 A, frequency of 94 GHz, peak magnetic field of 4 kG. Results wll be presented and will be compared to 2-D MAGIC simulations, as well as to experimental test data. This work is supported in part by the Air Force Office of Scientific Research.
An interactive 2-D power-line modeling and simulation tool
NASA Astrophysics Data System (ADS)
Hull, David; Adelman, Ross
2012-06-01
The U.S. Army Research Laboratory's Power-Line unmanned aerial vehicle (UAV) Modeling and Simulation (ARL-PLUMS) is a tool for estimating and analyzing quasi-static electric and magnetic fields due to power lines. This tool consists of an interactive 2-D graphical user interface (GUI) and a compute engine that can be used to calculate and visualize the E-Field and H-Field due to as many as seven conductors (two 3-phase circuits and a ground wire). ARL-PLUMS allows the user to set the geometry of the lines and the load conditions on those lines, and then calculate Ey, Ez, Hy, or Hz along a linear path or cutting plane, or in the form of a movie. The path can be along the ground or in the air to simulate the fields that might be observed, for example, by a robotic vehicle or a UAV. ARL-PLUMS makes several simplifying assumptions in order to allow simulations to be completed on a laptop PC interactively. In most cases, the results are excellent, providing a "90% solution" in just a few minutes of total modeling and simulation time. This paper describes the physics used by ARL-PLUMS, including the simplifying assumptions and the 2-D Method of Moments solver. Examples of electric and magnetic fields for different wire configurations, including typical 3-phase distribution and transmissions lines, are provided. Comparisons to similar results using a full 3-D model are also shown, and a discussion of errors that may be expected from the 2-D simulations is provided.
Quantum simulation of 2D topological physics in a 1D array of optical cavities.
Luo, Xi-Wang; Zhou, Xingxiang; Li, Chuan-Feng; Xu, Jin-Shi; Guo, Guang-Can; Zhou, Zheng-Wei
2015-07-06
Orbital angular momentum of light is a fundamental optical degree of freedom characterized by unlimited number of available angular momentum states. Although this unique property has proved invaluable in diverse recent studies ranging from optical communication to quantum information, it has not been considered useful or even relevant for simulating nontrivial physics problems such as topological phenomena. Contrary to this misconception, we demonstrate the incredible value of orbital angular momentum of light for quantum simulation by showing theoretically how it allows to study a variety of important 2D topological physics in a 1D array of optical cavities. This application for orbital angular momentum of light not only reduces required physical resources but also increases feasible scale of simulation, and thus makes it possible to investigate important topics such as edge-state transport and topological phase transition in a small simulator ready for immediate experimental exploration.
Quantum simulation of 2D topological physics in a 1D array of optical cavities
Luo, Xi-Wang; Zhou, Xingxiang; Li, Chuan-Feng; Xu, Jin-Shi; Guo, Guang-Can; Zhou, Zheng-Wei
2015-01-01
Orbital angular momentum of light is a fundamental optical degree of freedom characterized by unlimited number of available angular momentum states. Although this unique property has proved invaluable in diverse recent studies ranging from optical communication to quantum information, it has not been considered useful or even relevant for simulating nontrivial physics problems such as topological phenomena. Contrary to this misconception, we demonstrate the incredible value of orbital angular momentum of light for quantum simulation by showing theoretically how it allows to study a variety of important 2D topological physics in a 1D array of optical cavities. This application for orbital angular momentum of light not only reduces required physical resources but also increases feasible scale of simulation, and thus makes it possible to investigate important topics such as edge-state transport and topological phase transition in a small simulator ready for immediate experimental exploration. PMID:26145177
A fast convolution-based methodology to simulate 2-D/3-D cardiac ultrasound images.
Gao, Hang; Choi, Hon Fai; Claus, Piet; Boonen, Steven; Jaecques, Siegfried; Van Lenthe, G Harry; Van der Perre, Georges; Lauriks, Walter; D'hooge, Jan
2009-02-01
This paper describes a fast convolution-based methodology for simulating ultrasound images in a 2-D/3-D sector format as typically used in cardiac ultrasound. The conventional convolution model is based on the assumption of a space-invariant point spread function (PSF) and typically results in linear images. These characteristics are not representative for cardiac data sets. The spatial impulse response method (IRM) has excellent accuracy in the linear domain; however, calculation time can become an issue when scatterer numbers become significant and when 3-D volumetric data sets need to be computed. As a solution to these problems, the current manuscript proposes a new convolution-based methodology in which the data sets are produced by reducing the conventional 2-D/3-D convolution model to multiple 1-D convolutions (one for each image line). As an example, simulated 2-D/3-D phantom images are presented along with their gray scale histogram statistics. In addition, the computation time is recorded and contrasted to a commonly used implementation of IRM (Field II). It is shown that COLE can produce anatomically plausible images with local Rayleigh statistics but at improved calculation time (1200 times faster than the reference method).
A faster method for 3D/2D medical image registration--a simulation study.
Birkfellner, Wolfgang; Wirth, Joachim; Burgstaller, Wolfgang; Baumann, Bernard; Staedele, Harald; Hammer, Beat; Gellrich, Niels Claudius; Jacob, Augustinus Ludwig; Regazzoni, Pietro; Messmer, Peter
2003-08-21
3D/2D patient-to-computed-tomography (CT) registration is a method to determine a transformation that maps two coordinate systems by comparing a projection image rendered from CT to a real projection image. Iterative variation of the CT's position between rendering steps finally leads to exact registration. Applications include exact patient positioning in radiation therapy, calibration of surgical robots, and pose estimation in computer-aided surgery. One of the problems associated with 3D/2D registration is the fact that finding a registration includes solving a minimization problem in six degrees of freedom (dof) in motion. This results in considerable time requirements since for each iteration step at least one volume rendering has to be computed. We show that by choosing an appropriate world coordinate system and by applying a 2D/2D registration method in each iteration step, the number of iterations can be grossly reduced from n6 to n5. Here, n is the number of discrete variations around a given coordinate. Depending on the configuration of the optimization algorithm, this reduces the total number of iterations necessary to at least 1/3 of it's original value. The method was implemented and extensively tested on simulated x-ray images of a tibia, a pelvis and a skull base. When using one projective image and a discrete full parameter space search for solving the optimization problem, average accuracy was found to be 1.0 +/- 0.6(degrees) and 4.1 +/- 1.9 (mm) for a registration in six parameters, and 1.0 +/- 0.7(degrees) and 4.2 +/- 1.6 (mm) when using the 5 + 1 dof method described in this paper. Time requirements were reduced by a factor 3.1. We conclude that this hardware-independent optimization of 3D/2D registration is a step towards increasing the acceptance of this promising method for a wide number of clinical applications.
A faster method for 3D/2D medical image registration—a simulation study
NASA Astrophysics Data System (ADS)
Birkfellner, Wolfgang; Wirth, Joachim; Burgstaller, Wolfgang; Baumann, Bernard; Staedele, Harald; Hammer, Beat; Claudius Gellrich, Niels; Jacob, Augustinus Ludwig; Regazzoni, Pietro; Messmer, Peter
2003-08-01
3D/2D patient-to-computed-tomography (CT) registration is a method to determine a transformation that maps two coordinate systems by comparing a projection image rendered from CT to a real projection image. Iterative variation of the CT's position between rendering steps finally leads to exact registration. Applications include exact patient positioning in radiation therapy, calibration of surgical robots, and pose estimation in computer-aided surgery. One of the problems associated with 3D/2D registration is the fact that finding a registration includes solving a minimization problem in six degrees of freedom (dof) in motion. This results in considerable time requirements since for each iteration step at least one volume rendering has to be computed. We show that by choosing an appropriate world coordinate system and by applying a 2D/2D registration method in each iteration step, the number of iterations can be grossly reduced from n6 to n5. Here, n is the number of discrete variations around a given coordinate. Depending on the configuration of the optimization algorithm, this reduces the total number of iterations necessary to at least 1/3 of it's original value. The method was implemented and extensively tested on simulated x-ray images of a tibia, a pelvis and a skull base. When using one projective image and a discrete full parameter space search for solving the optimization problem, average accuracy was found to be 1.0 +/- 0.6(°) and 4.1 +/- 1.9 (mm) for a registration in six parameters, and 1.0 +/- 0.7(°) and 4.2 +/- 1.6 (mm) when using the 5 + 1 dof method described in this paper. Time requirements were reduced by a factor 3.1. We conclude that this hardware-independent optimization of 3D/2D registration is a step towards increasing the acceptance of this promising method for a wide number of clinical applications.
Matrone, G; Quaglia, F; Magenes, G
2010-01-01
Modern ultrasound imaging instrumentation for clinical applications allows real-time volumetric scanning of the patients' body. 4D imaging has been made possible thanks to the development of new echographic probes which consist in 2D phased arrays of piezoelectric transducers. In these new devices it is the system electronics which properly drives the matrix elements and focuses the beam in order to obtain a sequence of volumetric images. This paper introduces an ultrasound field simulator based on the Spatial Impulse Response method which is being properly developed to analyze the characteristics of the ultrasound field generated by a 2D phased array of transducers. Thanks to its high configurability by the user, it will represent a very useful tool for electronics designers in developing 4D ultrasound imaging systems components.
2D radiation-magnetohydrodynamic simulations of SATURN imploding Z-pinches
Hammer, J.H.; Eddleman, J.L.; Springer, P.T.
1995-11-06
Z-pinch implosions driven by the SATURN device at Sandia National Laboratory are modeled with a 2D radiation magnetohydrodynamic (MHD) code, showing strong growth of magneto-Rayleigh Taylor (MRT) instability. Modeling of the linear and nonlinear development of MRT modes predicts growth of bubble-spike structures that increase the time span of stagnation and the resulting x-ray pulse width. Radiation is important in the pinch dynamics keeping the sheath relatively cool during the run-in and releasing most of the stagnation energy. The calculations give x-ray pulse widths and magnitudes in reasonable agreement with experiments, but predict a radiating region that is too dense and radially localized at stagnation. We also consider peaked initial density profiles with constant imploding sheath velocity that should reduce MRT instability and improve performance. 2D krypton simulations show an output x-ray power > 80 TW for the peaked profile.
Comparison between 2D and 3D Numerical Modelling of a hot forging simulative test
Croin, M.; Ghiotti, A.; Bruschi, S.
2007-04-07
The paper presents the comparative analysis between 2D and 3D modelling of a simulative experiment, performed in laboratory environment, in which operating conditions approximate hot forging of a turbine aerofoil section. The plane strain deformation was chosen as an ideal case to analyze the process because of the thickness variations in the final section and the consequent distributions of contact pressure and sliding velocity at the interface that are closed to the conditions of the real industrial process. In order to compare the performances of 2D and 3D approaches, two different analyses were performed and compared with the experiments in terms of loads and temperatures peaks at the interface between the dies and the workpiece.
Spatially Resolved Synthetic Spectra from 2D Simulations of Stainless Steel Wire Array Implosions
Clark, R. W.; Giuliani, J. L.; Thornhill, J. W.; Chong, Y. K.; Dasgupta, A.; Davis, J.
2009-01-21
A 2D radiation MHD model has been developed to investigate stainless steel wire array implosion experiments on the Z and refurbished Z machines. This model incorporates within the Mach2 MHD code a self-consistent calculation of the non-LTE kinetics and ray trace based radiation transport. Such a method is necessary in order to account for opacity effects in conjunction with ionization kinetics of K-shell emitting plasmas. Here the model is used to investigate multi-dimensional effects of stainless steel wire implosions. In particular, we are developing techniques to produce non-LTE, axially and/or radially resolved synthetic spectra based upon snapshots of our 2D simulations. Comparisons between experimental spectra and these synthetic spectra will allow us to better determine the state of the experimental pinches.
Application of 2-D simulations to hollow z-pinch implosions
Peterson, D.L.; Bowers, R.L.; Brownell, J.H.
1997-12-01
The application of simulations of z-pinch implosions should have at least two goals: first, to properly model the most important physical processes occurring in the pinch allowing for a better understanding of the experiments and second, provide a design capability for future experiments. Beginning with experiments fielded at Los Alamos on the Pegasus 1 and Pegasus 2 capacitor banks, the authors have developed a methodology for simulating hollow z-pinches in two dimensions which has reproduced important features of the measured experimental current drive, spectrum, radiation pulse shape, peak power and total radiated energy. This methodology employs essentially one free parameter, the initial level of the random density perturbations imposed at the beginning of the 2-D simulation, but in general no adjustments to other parameters are required. Currently the authors are applying this capability to the analysis of recent Saturn and PBFA-Z experiments. The code results provide insight into the nature of the pinch plasma prior to arrival on-axis, during thermalization and development after peak pinch time. Among other things, the simulation results provide an explanation for the production of larger amounts of radiated energy than would be expected from a simple slug-model kinetic energy analysis and the appearance of multiple peaks in the radiation power. The 2-D modeling has also been applied to the analysis of Saturn dynamic hohlraum experiments and is being used in the design of this and other Z-Pinch applications on PBFA-Z.
2D PIC simulations of a curved supercritical shock: dynamics of the whistler precursor
NASA Astrophysics Data System (ADS)
Stienlet, Joël.; Savoini, Philippe; Lembege, Bertrand
2010-05-01
The whistler precursor emitted from the curved terrestrial shock front plays an important role in pre-decelerating and heating the incoming solar wind. Most previous works have mainly analyzed the features of the whistler precursor emission for a 1D planar shock where it is forced to propagate along the shock normal (Liewer and al, 1991) or to propagate obliquely with respect to a fixed shock normal direction in 2D planar shock simulation (Krauss-Varban et al., 1995). In the present case, the dynamics of the precursor is analyzed with the help of a 2D full particle simulation for a continuously curved shock within the angular range 90o ≥ ?Bn ≥ 45o where ?Bn is the angle between the shock normal and the upstream magnetostatic field. Both electrons and ions dynamics are described by a self consistent approach. Our results show that (i) the whistler precursor extends far from the shock front mainly along the magnetostatic field (projected on the simulation plane) and not along the shock normal; (ii) the width of these curved wave fronts (precursor) strongly decreases when moving far from the shock front; (iii) at the shock front, the precursor is emitted within an angular range much larger than that predicted by linear theory; (iv) the damping rate of the whistler precursor is analyzed for different directions of the shock normal. Wave particle energy transfer is analysed, and these results will be discussed and compared with previous 1D and 2D simulations of planar shocks; (v) the whistler precursor is not monochromatic, and interferences between modes are evidenced by beats and wave-packets in front of the shock. The impact of this effect on damping rate measurements will be discussed.
Methodology for accurate and rapid simulation of large arbitrary 2D layouts of advanced photomasks
NASA Astrophysics Data System (ADS)
Adam, Konstantinos; Neureuther, Andrew R.
2002-03-01
The edge domain decomposition method (edge-DDM) is developed as a very powerful extension of the domain decomposition methods presented for the rapid and accurate simulation of light scattering from advanced photomasks. The range of validity of the method is systematically evaluated and it is found to be accurate for wavelength-sized mask features with large vertical topography. The error associated primarily with neglecting corner effects is seen to concentrate at the extremities of the spectrum of propagating plane waves and is therefore filtered-out by the NA and the larger than one reduction factors in typical projection printing systems. A possible algorithmic implementation of the method, that involves rigorous pre-calculation of the edge-diffraction of all types of edges present in the layout, is presented for the simulation of large and arbitrary 2D layouts of alt. PSMs. A speed-up factor of 172,800 (1sec vs. 2days) is shown in the simulation of simple 3um by 3um (4X) 2D layouts (isolated hole and isolated island) with accuracy better than 99 percent compared to the rigorous 3D simulation of the mask diffraction. An example of the edge-DDM applied on a large 12um by 16um 2D layout of a 0deg/90deg/270deg alt. PSM, where the near fields are estimated in less than 1min, is also presented. Spectral matching of the edge-diffraction with more compact piecewise constant models is shown to lead to additional speed-ups of the edge-DDM.
Fast acceleration of 2D wave propagation simulations using modern computational accelerators.
Wang, Wei; Xu, Lifan; Cavazos, John; Huang, Howie H; Kay, Matthew
2014-01-01
Recent developments in modern computational accelerators like Graphics Processing Units (GPUs) and coprocessors provide great opportunities for making scientific applications run faster than ever before. However, efficient parallelization of scientific code using new programming tools like CUDA requires a high level of expertise that is not available to many scientists. This, plus the fact that parallelized code is usually not portable to different architectures, creates major challenges for exploiting the full capabilities of modern computational accelerators. In this work, we sought to overcome these challenges by studying how to achieve both automated parallelization using OpenACC and enhanced portability using OpenCL. We applied our parallelization schemes using GPUs as well as Intel Many Integrated Core (MIC) coprocessor to reduce the run time of wave propagation simulations. We used a well-established 2D cardiac action potential model as a specific case-study. To the best of our knowledge, we are the first to study auto-parallelization of 2D cardiac wave propagation simulations using OpenACC. Our results identify several approaches that provide substantial speedups. The OpenACC-generated GPU code achieved more than 150x speedup above the sequential implementation and required the addition of only a few OpenACC pragmas to the code. An OpenCL implementation provided speedups on GPUs of at least 200x faster than the sequential implementation and 30x faster than a parallelized OpenMP implementation. An implementation of OpenMP on Intel MIC coprocessor provided speedups of 120x with only a few code changes to the sequential implementation. We highlight that OpenACC provides an automatic, efficient, and portable approach to achieve parallelization of 2D cardiac wave simulations on GPUs. Our approach of using OpenACC, OpenCL, and OpenMP to parallelize this particular model on modern computational accelerators should be applicable to other computational models of
Fast Acceleration of 2D Wave Propagation Simulations Using Modern Computational Accelerators
Wang, Wei; Xu, Lifan; Cavazos, John; Huang, Howie H.; Kay, Matthew
2014-01-01
Recent developments in modern computational accelerators like Graphics Processing Units (GPUs) and coprocessors provide great opportunities for making scientific applications run faster than ever before. However, efficient parallelization of scientific code using new programming tools like CUDA requires a high level of expertise that is not available to many scientists. This, plus the fact that parallelized code is usually not portable to different architectures, creates major challenges for exploiting the full capabilities of modern computational accelerators. In this work, we sought to overcome these challenges by studying how to achieve both automated parallelization using OpenACC and enhanced portability using OpenCL. We applied our parallelization schemes using GPUs as well as Intel Many Integrated Core (MIC) coprocessor to reduce the run time of wave propagation simulations. We used a well-established 2D cardiac action potential model as a specific case-study. To the best of our knowledge, we are the first to study auto-parallelization of 2D cardiac wave propagation simulations using OpenACC. Our results identify several approaches that provide substantial speedups. The OpenACC-generated GPU code achieved more than speedup above the sequential implementation and required the addition of only a few OpenACC pragmas to the code. An OpenCL implementation provided speedups on GPUs of at least faster than the sequential implementation and faster than a parallelized OpenMP implementation. An implementation of OpenMP on Intel MIC coprocessor provided speedups of with only a few code changes to the sequential implementation. We highlight that OpenACC provides an automatic, efficient, and portable approach to achieve parallelization of 2D cardiac wave simulations on GPUs. Our approach of using OpenACC, OpenCL, and OpenMP to parallelize this particular model on modern computational accelerators should be applicable to other computational models of wave propagation in
Tuning and simulating a 193-nm resist for 2D applications
NASA Astrophysics Data System (ADS)
Howard, William B.; Wiaux, Vincent; Ercken, Monique; Bui, Bang; Byers, Jeff D.; Pochkowski, Mike
2002-07-01
For some applications, the usefulness of lithography simulation results depends strongly on the matching between experimental conditions and the simulation input parameters. If this matching is optimized and other sources of error are minimized, then the lithography model can be used to explain printed wafer experimental results. Further, simulation can be useful in predicting the results or in choosing the correct set of experiments. In this paper, PROLITH and ProDATA AutoTune were used to systematically vary simulation input parameters to match measured results on printed wafers used in a 193 nm process. The validity of the simulation parameters was then checked using 3D simulation compared to 2D top-down SEM images. The quality of matching was evaluated using the 1D metrics of average gate CD and Line End Shortening (LES). To ensure the most accurate simulation, a new approach was taken to create a compound mask from GDSII contextual information surrounding an accurate SEM image of the reticle region of interest. Corrections were made to account for all metrology offsets.
NASA Astrophysics Data System (ADS)
Mendoza-Torres, F.; Diaz-Viera, M. A.
2015-12-01
In many natural fractured porous media, such as aquifers, soils, oil and geothermal reservoirs, fractures play a crucial role in their flow and transport properties. An approach that has recently gained popularity for modeling fracture systems is the Discrete Fracture Network (DFN) model. This approach consists in applying a stochastic boolean simulation method, also known as object simulation method, where fractures are represented as simplified geometric objects (line segments in 2D and polygons in 3D). One of the shortcomings of this approach is that it usually does not consider the dependency relationships that may exist between the geometric properties of fractures (direction, length, aperture, etc), that is, each property is simulated independently. In this work a method for modeling such dependencies by copula theory is introduced. In particular, a nonparametric model using Bernstein copulas for direction-length fracture dependency in 2D is presented. The application of this method is illustrated in a case study for a fractured rock sample from a carbonate reservoir outcrop.
High-resolution 2D3V simulations of forced hybrid-kinetic turbulence
NASA Astrophysics Data System (ADS)
Cerri, Silvio Sergio; Califano, Francesco; Rincon, Francois; Told, Daniel; Jenko, Frank; Pegoraro, Francesco
2016-10-01
The understanding of the kinetic processes at play in plasma turbulence is a frontier problem in plasma physics and among the topics currently of most interest in space plasma research. Here we investigate the properties of turbulence from the end of the magnetohydrodynamic (MHD) cascade to scales well below the ion gyroradius (i.e., the so-called ``dissipation'' or ``dispersion'' range) by means of unprecedented high-resolution simulations of forced hybrid-kinetic turbulence in a 2D3V phase-space (two real-space and three velocity-space dimensions). Different values of the plasma beta parameter typical of the solar wind (SW) are investigated. Several aspects of turbulence at small-scales emerging from the simulations are presented and discussed. Even within the limitations of the hybrid approach in 2D3V, a reasonable agreement with SW observations and with theory is found. Finally, we identify possible implications and questions related to SW turbulence which arise from this study. This research has been funded by European Union's Seventh Framework Programme (FP7/2007-2013)/ERC Grant Agreement No.277870 and by Euratom research and training programme 2014-2018. Simulations were performed on Fermi (CINECA, IT) and Hydra (MPCDF, DE).
2-D/3-D ECE imaging data for validation of turbulence simulations
NASA Astrophysics Data System (ADS)
Choi, Minjun; Lee, Jaehyun; Yun, Gunsu; Lee, Woochang; Park, Hyeon K.; Park, Young-Seok; Sabbagh, Steve A.; Wang, Weixing; Luhmann, Neville C., Jr.
2015-11-01
The 2-D/3-D KSTAR ECEI diagnostic can provide a local 2-D/3-D measurement of ECE intensity. Application of spectral analysis techniques to the ECEI data allows local estimation of frequency spectra S (f) , wavenumber spectra S (k) , wavernumber and frequency spectra S (k , f) , and bispectra b (f1 ,f2) of ECE intensity over the 2-D/3-D space, which can be used to validate turbulence simulations. However, the minimum detectable fluctuation amplitude and the maximum detectable wavenumber are limited by the temporal and spatial resolutions of the diagnostic system, respectively. Also, the finite measurement area of the diagnostic channel could introduce uncertainty in the spectra estimation. The limitations and accuracy of the ECEI estimated spectra have been tested by a synthetic ECEI diagnostic with the model and/or fluctuations calculated by GTS. Supported by the NRF of Korea under Contract No. NRF-2014M1A7A1A03029881 and NRF-2014M1A7A1A03029865 and by U.S. DOE grant DE-FG02-99ER54524.
2012-11-08
Comparison between adaptive and uniform discontinuous Galerkin simulations in dry 2D bubble experiments Andreas Müllera,∗, Jörn Behrensb, Francis X...joern.behrens@zmaw.de (Jörn Behrens), fxgirald@nps.edu ( Francis X. Giraldo), vwirth@uni-mainz.de (Volkmar Wirth) Accepted by Journal of Computational...Mon. Weather Rev. 120 (1992) 1675–1706. [3] D. P. Bacon , N. N. Ahmad, Z. Boybeyi, T. J. Dunn, M. S. Hall, P. C. S. Lee, R. A. Sarma, M. D. Turner, K. T
Solution of the field equations for 2-D electromagnetic direct implicit plasma simulation
NASA Astrophysics Data System (ADS)
Hewett, D. W.; Langdon, A. B.
1985-01-01
A direct implicit particle-in-cell (PIC) simulation model with full electromagnetic (EM) effects has been implemented in 2-D Cartesian geometry. The model, implemented with the D1 time differencing scheme, was first implemented in a 1-D electrostatic (ES) version to gain some experience with spatial differencing in forms suitable for extension to the full EM field in two dimensions. The implicit EM field solve is considerably different from the implicit ES code. The EM field calculation requires an inductive part as well as the electrostatic and the B field must be self-consistently advanced.
Simulations of two-particle interactions with 2D quantum walks in time
Schreiber, A.; Laiho, K.; Silberhorn, C.; Rohde, P. P.; Štefaňak, M.; Potoček, V.; Hamilton, C.; Jex, I.
2014-12-04
We present the experimental implementation of a quantum walk on a two-dimensional lattice and show how to employ the optical system to simulate the quantum propagation of two interacting particles. Our quantum walk in time transfers the spatial spread of a quantum walk into the time domain, which guarantees a high stability and scalability of the setup. We present with our device quantum walks over 12 steps on a 2D lattice. By changing the properties of the driving quantum coin, we investigate different kinds of two-particle interactions and reveal their impact on the occurring quantum propagation.
Ion acoustic wave collapse via two-ion wave decay: 2D Vlasov simulation and theory
NASA Astrophysics Data System (ADS)
Chapman, Thomas; Berger, Richard; Banks, Jeffrey; Brunner, Stephan
2015-11-01
The decay of ion acoustic waves (IAWs) via two-ion wave decay may transfer energy from the electric field of the IAWs to the particles, resulting in a significant heating of resonant particles. This process has previously been shown in numerical simulations to decrease the plasma reflectivity due to stimulated Brillouin scattering. Two-ion wave decay is a fundamental property of ion acoustic waves that occurs over most if not all of the parameter space of relevance to inertial confinement fusion experiments, and can lead to a sudden collapse of IAWs. The treatment of all species kinetically, and in particular the electrons, is required to describe the decay process correctly. We present fully kinetic 2D+2V Vlasov simulations of IAWs undergoing decay to a highly nonlinear turbulent state using the code LOKI. The scaling of the decay rate with characteristic plasma parameters and wave amplitude is shown. A new theory describing two-ion wave decay in 2D, that incorporates key kinetic properties of the electrons, is presented and used to explain quantitatively for the first time the observed decay of IAWs. Work performed under auspices of U.S. DoE by LLNL, Contract DE-AC52-07NA2734. Funded by LDRD 15-ERD-038 and supported by LLNL Grand Challenge allocation.
GMC COLLISIONS AS TRIGGERS OF STAR FORMATION. I. PARAMETER SPACE EXPLORATION WITH 2D SIMULATIONS
Wu, Benjamin; Loo, Sven Van; Tan, Jonathan C.; Bruderer, Simon
2015-09-20
We utilize magnetohydrodynamic (MHD) simulations to develop a numerical model for giant molecular cloud (GMC)–GMC collisions between nearly magnetically critical clouds. The goal is to determine if, and under what circumstances, cloud collisions can cause pre-existing magnetically subcritical clumps to become supercritical and undergo gravitational collapse. We first develop and implement new photodissociation region based heating and cooling functions that span the atomic to molecular transition, creating a multiphase ISM and allowing modeling of non-equilibrium temperature structures. Then in 2D and with ideal MHD, we explore a wide parameter space of magnetic field strength, magnetic field geometry, collision velocity, and impact parameter and compare isolated versus colliding clouds. We find factors of ∼2–3 increase in mean clump density from typical collisions, with strong dependence on collision velocity and magnetic field strength, but ultimately limited by flux-freezing in 2D geometries. For geometries enabling flow along magnetic field lines, greater degrees of collapse are seen. We discuss observational diagnostics of cloud collisions, focussing on {sup 13}CO(J = 2–1), {sup 13}CO(J = 3–2), and {sup 12}CO(J = 8–7) integrated intensity maps and spectra, which we synthesize from our simulation outputs. We find that the ratio of J = 8–7 to lower-J emission is a powerful diagnostic probe of GMC collisions.
Superclusters of galaxies from the 2dF redshift survey. 2. Comparison with simulations
Einasto, Jaan; Einasto, M.; Saar, E.; Tago, E.; Liivamagi, L.J.; Joeveer, M.J; Suhhonenko, I.; Hutsi, G.; Jaaniste, J.; Heinamaki, P.; Muller, V.; Knebe, A.; Tucker, D.; /Fermilab
2006-04-01
We investigate properties of superclusters of galaxies found on the basis of the 2dF Galaxy Redshift Survey, and compare them with properties of superclusters from the Millennium Simulation.We study the dependence of various characteristics of superclusters on their distance from the observer, on their total luminosity, and on their multiplicity. The multiplicity is defined by the number of Density Field (DF) clusters in superclusters. Using the multiplicity we divide superclusters into four richness classes: poor, medium, rich and extremely rich.We show that superclusters are asymmetrical and have multi-branching filamentary structure, with the degree of asymmetry and filamentarity being higher for the more luminous and richer superclusters. The comparison of real superclusters with Millennium superclusters shows that most properties of simulated superclusters agree very well with real data, the main differences being in the luminosity and multiplicity distributions.
NASA Astrophysics Data System (ADS)
Bezzeccheri, E.; Colasanti, S.; Falco, A.; Liguori, R.; Rubino, A.; Lugli, P.
2016-05-01
Vertical Organic Transistors and Phototransistors have been proven to be promising technologies due to the advantages of reduced channel length and larger sensitive area with respect to planar devices. Nevertheless, a real improvement of their performance is subordinate to the quantitative description of their operation mechanisms. In this work, we present a comparative study on the modeling of vertical and planar Organic Phototransistor (OPT) structures. Computer-based simulations of the devices have been carried out with Synopsys Sentaurus TCAD in a 2D Drift-Diffusion framework. The photoactive semiconductor material has been modeled using the virtual semiconductor approach as the archetypal P3HT:PC61BM bulk heterojunction. It has been found that both simulated devices have comparable electrical and optical characteristics, accordingly to recent experimental reports on the subject.
Superclusters of galaxies from the 2dF redshift survey. II. Comparison with simulations
NASA Astrophysics Data System (ADS)
Einasto, J.; Einasto, M.; Saar, E.; Tago, E.; Liivamägi, L. J.; Jõeveer, M.; Suhhonenko, I.; Hütsi, G.; Jaaniste, J.; Heinämäki, P.; Müller, V.; Knebe, A.; Tucker, D.
2007-02-01
Aims:We investigate properties of superclusters of galaxies found in of the 2dF Galaxy Redshift Survey, and compare them with properties of superclusters from the Millennium Simulation. Methods: We study the dependence of various characteristics of superclusters on their distance from the observer, on their total luminosity, and on their multiplicity. The multiplicity is defined by the number of Density Field (DF) clusters in superclusters. Using the multiplicity we divide superclusters into four richness classes: poor, medium, rich and extremely rich. Results: We show that superclusters are asymmetrical and have a multi-branching filamentary structure, with the degree of asymmetry and filamentarity being higher for the more luminous and richer superclusters. The comparison of real superclusters with Millennium superclusters shows that most properties of simulated superclusters agree very well with real data, the main differences being in the luminosity and multiplicity distributions.
Well-posedness and generalized plane waves simulations of a 2D mode conversion model
Imbert-Gérard, Lise-Marie
2015-12-15
Certain types of electro-magnetic waves propagating in a plasma can undergo a mode conversion process. In magnetic confinement fusion, this phenomenon is very useful to heat the plasma, since it permits to transfer the heat at or near the plasma center. This work focuses on a mathematical model of wave propagation around the mode conversion region, from both theoretical and numerical points of view. It aims at developing, for a well-posed equation, specific basis functions to study a wave mode conversion process. These basis functions, called generalized plane waves, are intrinsically based on variable coefficients. As such, they are particularly adapted to the mode conversion problem. The design of generalized plane waves for the proposed model is described in detail. Their implementation within a discontinuous Galerkin method then provides numerical simulations of the process. These first 2D simulations for this model agree with qualitative aspects studied in previous works.
Highly-resolved 2D HYDRA simulations of Double-Shell Ignition Designs
Milovich, J L; Amendt, P; Hamza, A; Marinak, M; Robey, H
2006-06-30
Double-shell (DS) targets (Amendt, P. A. et al., 2002) offer a complementary approach to the cryogenic baseline design (Lindl, J. et al., 2004) for achieving ignition on the National Ignition Facility (NIF). Among the expected benefits are the ease of room temperature preparation and fielding, the potential for lower laser backscatter and the reduced need for careful shock timing. These benefits are offset, however, by demanding fabrication tolerances, e.g., shell concentricity and shell surface smoothness. In particular, the latter is of paramount importance since DS targets are susceptible to the growth of interface perturbations from impulsive and time-dependent accelerations. Previous work (Milovich, J. L. et al., 2004) has indicated that the growth of perturbations on the outer surface of the inner shell is potentially disruptive. To control this instability new designs have been proposed requiring bimetallic inner shells and material-matching mid-Z nanoporous foam. The challenges in manufacturing such exotic foams have led to a further evaluation of the densities and pore sizes needed to reduce the seeding of perturbations on the outer surface of the inner shell, thereby guiding the ongoing material science research efforts. Highly-resolved 2D simulations of porous foams have been performed to establish an upper limit on the allowable pore sizes for instability growth. Simulations indicate that foams with higher densities than previously thought are now possible. Moreover, while at the present time we are only able to simulate foams with average pore sizes larger than 1 micron (due to computational limitations), we can conclude that these pore sizes are potentially problematic. Furthermore, the effect of low-order hohlraum radiation asymmetries on the growth of intrinsic surface perturbations is also addressed. Highly-resolved 2D simulations indicate that the transverse flows that are set up by these low-order mode features (which can excite Kelvin
Spot size variation FCS in simulations of the 2D Ising model
NASA Astrophysics Data System (ADS)
Burns, Margaret C.; Nouri, Mariam; Veatch, Sarah L.
2016-06-01
Spot variation fluorescence correlation spectroscopy (svFCS) was developed to study the movement and organization of single molecules in plasma membranes. This experimental technique varies the size of an illumination area while measuring correlations in time using standard fluorescence correlation methods. Frequently, this data is interpreted using the assumption that correlation measurements reflect the dynamics of single molecule motions, and not motions of the average composition. Here, we explore how svFCS measurements report on the dynamics of components diffusing within simulations of a 2D Ising model with a conserved order parameter. Simulated correlation functions report on both the fast dynamics of single component mobility and the slower dynamics of the average composition. Over a range of simulation conditions, a conventional svFCS analysis suggests the presence of anomalous diffusion even though single molecule motions are nearly Brownian in these simulations. This misinterpretation is most significant when the surface density of the fluorescent label is elevated, therefore we suggest future measurements be made over a range of tracer densities. Some simulation conditions reproduce qualitative features of published svFCS experimental data. Overall, this work emphasizes the need to probe membranes using multiple complimentary experimental methodologies in order to draw conclusions regarding the nature of spatial and dynamical heterogeneity in these systems.
Simulation of trickle irrigation, an extension to the US Geological Survey's computer program VS2D
Healy, R.W.
1987-01-01
A method is presented for simulating water movement through unsaturated porous media in response to a constant rate of application from a surface source. Because the rate at which water can be absorbed by soil is limited, the water will pond; therefore the actual surface area over which the water is applied may change with time and in general will not be known beforehand. An iterative method is used to determine the size of this ponded area at any time. This method will be most useful for simulating trickling irrigation, but also may be of value for simulating movement of water is soils as the result of an accidental spill. The method is an extension to the finite difference computer program VS2D developed by the U.S. Geological Survey, which simulates water movement through variably saturated porous media. The simulated region can be a vertical, 2-dimensional cross section for treatment of a surface line source or an axially symmetric, 3-dimensional cylinder for a point source. Five test problems, obtained from the literature , are used to demonstrate the ability of the method to accurately match analytical and experimental results. (Author 's abstract)
Reynolds-Averaged Navier-Stokes Simulation of a 2D Circulation Control Wind Tunnel Experiment
NASA Technical Reports Server (NTRS)
Allan, Brian G.; Jones, Greg; Lin, John C.
2011-01-01
Numerical simulations are performed using a Reynolds-averaged Navier-Stokes (RANS) flow solver for a circulation control airfoil. 2D and 3D simulation results are compared to a circulation control wind tunnel test conducted at the NASA Langley Basic Aerodynamics Research Tunnel (BART). The RANS simulations are compared to a low blowing case with a jet momentum coefficient, C(sub u), of 0:047 and a higher blowing case of 0.115. Three dimensional simulations of the model and tunnel walls show wall effects on the lift and airfoil surface pressures. These wall effects include a 4% decrease of the midspan sectional lift for the C(sub u) 0.115 blowing condition. Simulations comparing the performance of the Spalart Allmaras (SA) and Shear Stress Transport (SST) turbulence models are also made, showing the SST model compares best to the experimental data. A Rotational/Curvature Correction (RCC) to the turbulence model is also evaluated demonstrating an improvement in the CFD predictions.
Spot size variation FCS in simulations of the 2D Ising model
Burns, Margaret C.; Nouri, Mariam; Veatch, Sarah L.
2016-01-01
Spot variation fluorescence correlation spectroscopy (svFCS) was developed to study the movement and organization of single molecules in plasma membranes. This experimental technique varies the size of an illumination area while measuring correlations in time using standard fluorescence correlation methods. Frequently, this data is interpreted using the assumption that correlation measurements reflect the dynamics of single molecule motions, and not motions of the average composition. Here, we explore how svFCS measurements report on the dynamics of components diffusing within simulations of a 2D Ising model with a conserved order parameter. Simulated correlation functions report on both the fast dynamics of single component mobility and the slower dynamics of the average composition. Over a range of simulation conditions, a conventional svFCS analysis suggests the presence of anomalous diffusion even though single molecule motions are nearly Brownian in these simulations. This misinterpretation is most significant when the surface density of the fluorescent label is elevated, therefore we suggest future measurements be made over a range of tracer densities. Some simulation conditions reproduce qualitative features of published svFCS experimental data. Overall, this work emphasizes the need to probe membranes using multiple complimentary experimental methodologies in order to draw conclusions regarding the nature of spatial and dynamical heterogeneity in these systems. PMID:27274570
Spot size variation FCS in simulations of the 2D Ising model.
Burns, Margaret C; Nouri, Mariam; Veatch, Sarah L
2016-06-02
Spot variation fluorescence correlation spectroscopy (svFCS) was developed to study the movement and organization of single molecules in plasma membranes. This experimental technique varies the size of an illumination area while measuring correlations in time using standard fluorescence correlation methods. Frequently, this data is interpreted using the assumption that correlation measurements reflect the dynamics of single molecule motions, and not motions of the average composition. Here, we explore how svFCS measurements report on the dynamics of components diffusing within simulations of a 2D Ising model with a conserved order parameter. Simulated correlation functions report on both the fast dynamics of single component mobility and the slower dynamics of the average composition. Over a range of simulation conditions, a conventional svFCS analysis suggests the presence of anomalous diffusion even though single molecule motions are nearly Brownian in these simulations. This misinterpretation is most significant when the surface density of the fluorescent label is elevated, therefore we suggest future measurements be made over a range of tracer densities. Some simulation conditions reproduce qualitative features of published svFCS experimental data. Overall, this work emphasizes the need to probe membranes using multiple complimentary experimental methodologies in order to draw conclusions regarding the nature of spatial and dynamical heterogeneity in these systems.
Tropical Oceanic Precipitation Processes over Warm Pool: 2D and 3D Cloud Resolving Model Simulations
NASA Technical Reports Server (NTRS)
Tao, W.- K.; Johnson, D.
1998-01-01
Rainfall is a key link in the hydrologic cycle as well as the primary heat source for the atmosphere, The vertical distribution of convective latent-heat release modulates the large-scale circulations of the tropics, Furthermore, changes in the moisture distribution at middle and upper levels of the troposphere can affect cloud distributions and cloud liquid water and ice contents. How the incoming solar and outgoing longwave radiation respond to these changes in clouds is a major factor in assessing climate change. Present large-scale weather and climate models simulate cloud processes only crudely, reducing confidence in their predictions on both global and regional scales. One of the most promising methods to test physical parameterizations used in General Circulation Models (GCMS) and climate models is to use field observations together with Cloud Resolving Models (CRMs). The CRMs use more sophisticated and physically realistic parameterizations of cloud microphysical processes, and allow for their complex interactions with solar and infrared radiative transfer processes. The CRMs can reasonably well resolve the evolution, structure, and life cycles of individual clouds and cloud systems, The major objective of this paper is to investigate the latent heating, moisture and momenti,im budgets associated with several convective systems developed during the TOGA COARE IFA - westerly wind burst event (late December, 1992). The tool for this study is the Goddard Cumulus Ensemble (CCE) model which includes a 3-class ice-phase microphysical scheme, The model domain contains 256 x 256 grid points (using 2 km resolution) in the horizontal and 38 grid points (to a depth of 22 km depth) in the vertical, The 2D domain has 1024 grid points. The simulations are performed over a 7 day time period. We will examine (1) the precipitation processes (i.e., condensation/evaporation) and their interaction with warm pool; (2) the heating and moisture budgets in the convective and
Tropical Oceanic Precipitation Processes over Warm Pool: 2D and 3D Cloud Resolving Model Simulations
NASA Technical Reports Server (NTRS)
Tao, W.- K.; Johnson, D.
1998-01-01
Rainfall is a key link in the hydrologic cycle as well as the primary heat source for the atmosphere, The vertical distribution of convective latent-heat release modulates the large-scale circulations of the tropics, Furthermore, changes in the moisture distribution at middle and upper levels of the troposphere can affect cloud distributions and cloud liquid water and ice contents. How the incoming solar and outgoing longwave radiation respond to these changes in clouds is a major factor in assessing climate change. Present large-scale weather and climate models simulate cloud processes only crudely, reducing confidence in their predictions on both global and regional scales. One of the most promising methods to test physical parameterizations used in General Circulation Models (GCMS) and climate models is to use field observations together with Cloud Resolving Models (CRMs). The CRMs use more sophisticated and physically realistic parameterizations of cloud microphysical processes, and allow for their complex interactions with solar and infrared radiative transfer processes. The CRMs can reasonably well resolve the evolution, structure, and life cycles of individual clouds and cloud systems, The major objective of this paper is to investigate the latent heating, moisture and momenti,im budgets associated with several convective systems developed during the TOGA COARE IFA - westerly wind burst event (late December, 1992). The tool for this study is the Goddard Cumulus Ensemble (CCE) model which includes a 3-class ice-phase microphysical scheme, The model domain contains 256 x 256 grid points (using 2 km resolution) in the horizontal and 38 grid points (to a depth of 22 km depth) in the vertical, The 2D domain has 1024 grid points. The simulations are performed over a 7 day time period. We will examine (1) the precipitation processes (i.e., condensation/evaporation) and their interaction with warm pool; (2) the heating and moisture budgets in the convective and
NASA Astrophysics Data System (ADS)
Mayer, L.
2012-07-01
We review progress in cosmological SPH simulations of disk galaxy formation. We discuss the role of numerical resolution and sub-grid recipes of star formation and feedback from supernovae, higlighting the important role of a high star formation density threshold comparable to that of star forming molecular gas phase. Two recent succesfull examples, in simulations of the formation of gas-rich bulgeless dwarf galaxies and in simulations of late-type spirals (the ERIS simulations), are presented and discussed. In the ERIS simulations, already in the progenitors at z = 3 the resolution is above the threshold indicated by previous idealized numerical experiments as necessary to minimize numerical angular momentum loss (Kaufmann et al. 2007). A high star formation density threshold maintains an inhomogeneous interstellar medium, where star formation is clustered, and thus the local effect of supernovae feedback is enhanced. As a result, outflows are naturally generated removing 2/3 of the baryons in galaxies with Vvir˜50 km/s and ˜ 30% of the baryons in galaxies with (Vvir ˜ 150 km/s). Low angular momentum baryons are preferentially removed since the strongest bursts of star formation occur predominantly near the center, especially after a merger event. This produces pure exponential disks or small bulges depending on galaxy mass, and, correspondingly, slowly rising or nearly flat rotation curves that match those of observed disk galaxies. In dwarfs the rapid mass removal by outflows generates a core-like distribution in the dark matter. Furthermore, contrary to the common picture, in the ERIS spiral galaxies a bar/pseudobulge forms rapidly, and not secularly, as a result of mergers and interactions at high-z.
Adaptation of a 2-D Clinostat for Simulated Microgravity Experiments with Adherent Cells
NASA Astrophysics Data System (ADS)
Eiermann, Peter; Kopp, Sascha; Hauslage, Jens; Hemmersbach, Ruth; Gerzer, Rupert; Ivanova, Krassimira
2013-10-01
The fast-rotating 2-D clinostat, a ground-based facility for investigations in simulated microgravity, is mainly used for experiments with cell suspensions. Here, we describe the adaptation of a 2-D clinostat for adherent cell investigations using commercially available slide flasks. As a gradient of residual accelerations is present in the slide flasks during clinorotation, the range of maximal g-values has to be adjusted to the investigated cells and type of analysis. For gene expression analysis, a harvesting slide chamber was constructed, allowing collection of cells exposed to defined g-values. Using this slide chamber, human 1F6 melanoma cell line, exposed in the ranges of ≤0.012 g, ≤0.024 g, or ≤0.036 g for 24 h, was harvested and the respective mRNA levels of guanylyl cyclase A (GC-A), an enzyme catalyzing cyclic GMP synthesis, were determined by real-time quantitative PCR analysis. Our results show that the down-regulation of GC-A mRNA levels in 1F6 melanoma cells depends on the residual acceleration values with a maximal reduction at ≤0.012 g. We further used the slide flasks by the clinorotation of murine RAW 264.7 macrophage cell line for f-actin analysis. The laser scanning microscopy images of cells exposed to g-values of ≤0.006 g for 1 h show an increase in the cell size of clinorotated cells, but no rearrangement in the f-actin filament system compared to static 1-g controls. Thus, 2-D clinostats equipped with slide flasks can be used for adherent cell experiments, however, the maximal g-values have to be carefully considered.
Rise characteristics of gas bubbles in a 2D rectangular column: VOF simulations vs experiments
Krishna, R.; Baten, J.M. van
1999-10-01
About five centuries ago, Leonardo da Vinci described the sinuous motion of gas bubbles rising in water. The authors have attempted to simulate the rise trajectories of bubbles of 4, 5, 7, 8, 9, 12, and 20 mm in diameter rising in a 2D rectangular column filled with water. The simulations were carried out using the volume-of-fluid (VOF) technique developed by Hirt and Nichols (J. Computational Physics, 39, 201--225 (1981)). To solve the Navier-Stokes equations of motion the authors used a commercial solver, CFX 4.1c of AEA Technology, UK. They developed their own bubble-tracking algorithm to capture sinuous bubble motions. The 4 and 5 mm bubbles show large lateral motions observed by Da Vinci. The 7, 8 and 9 mm bubble behave like jellyfish. The 12 mm bubble flaps its wings like a bird. The extent of lateral motion of the bubbles decreases with increasing bubble size. Bubbles larger than 20 mm in size assume a spherical cap form and simulations of the rise characteristics match experiments exactly. VOF simulations are powerful tools for a priori determination of the morphology and rise characteristics of bubbles rising in a liquid. Bubble-bubble interactions are also properly modeled by the VOF technique.
Numerical simulation of 2D buoyant jets in ice-covered and temperature-stratified water
NASA Astrophysics Data System (ADS)
Gu, Ruochuan
A two-dimensional (2D) unsteady simulation model is applied to the problem of a submerged warm water discharge into a stratified lake or reservoir with an ice cover. Numerical simulations and analyses are conducted to gain insight into large-scale convective recirculation and flow processes in a cold waterbody induced by a buoyant jet. Jet behaviors under various discharge temperatures are captured by directly modeling flow and thermal fields. Flow structures and processes are described by the simulated spatial and temporal distributions of velocity and temperature in various regions: deflection, recirculation, attachment, and impingement. Some peculiar hydrothermal and dynamic features, e.g. reversal of buoyancy due to the dilution of a warm jet by entraining cold ambient water, are identified and examined. Simulation results show that buoyancy is the most important factor controlling jet behavior and mixing processes. The inflow boundary is treated as a liquid wall from which the jet is offset. Similarity and difference in effects of boundaries perpendicular and parallel to flow, and of buoyancy on jet attachment and impingement, are discussed. Symmetric flow configuration is used to de-emphasize the Coanda effect caused by offset.
Atomistic simulations of J-integral in 2D graphene nanosystems.
Jin, Y; Yuan, F G
2005-12-01
The J-integral is investigated in discrete atomic systems using molecular mechanics simulations. A method of calculating J-integral in specified atomic domains is developed. Two cases, a semiinfinite crack in an infinite domain under the remote K-field deformation and a finite crack length in a finite geometry under the tensile and shear deformation prescribed on the boundary, are studied in the two-dimensional graphene sheets and the values of J-integral are obtained under small-strain deformation. The comparison with energy release rates in Mode I and Mode II based on continuum theory of linear elastic fracture mechanics show good agreements. Meanwhile, the nonlinear strain and stress relation of a 2D graphene sheet is evaluated and is fitted with a power law curve. With necessary modifications on the Tersoff-Brenner potential, the critical values of J-integral of 2D graphene systems, which denoted as Jc, are eventually obtained. The results are then compared with those from the relevant references.
Fanchi, J.R.
1985-04-01
Under the sponsorship of the US Department of Energy, a publicly available chemical simulator has been evaluated and substantially enhanced to serve as a useful tool for projecting polymer or chemical flood performance. The program, CHEM2D, is a two-dimensional, three-phase, nine-component finite-difference numerical simulator. It can model primary depletion, waterfloods, polymer floods, and micellar/polymer floods using heterogeneous linear, areal, or cross-sectional reservoir descriptions. The user may specify well performance as either pressure or rate constrained. Both a constant time step size and a variable time step size based on extrapolation of concentration changes are available as options. A solution technique which is implicit in pressure and explicit in saturations and concentrations is used. The major physical mechanisms that are modeled include adsorption, capillary trapping, cation exchange, dilution, dispersion, interfacial tension, binary or ternary phase behavior, non-Newtonian polymer rheology, and two-phase or three-phase relative permeability. Typical components include water, oil, surfactant, polymer, and three ions (chloride, calcium, and sodium). Components may partition amongst the aqueous, oleic, and microemulsion phases. Volume I of this report provides a discussion of the formulation and algorithms used within CHEM2D. Included in Volume I are a number of validation and illustrative examples, as well as the FORTRAN code. The CHEM2D user's manual, Volume II, contains both the input data sets for the examples presented in Volume I and an example output. All appendices and a phase behavior calculation program are collected in Volume III. 20 references.
Simulating ultrasound fields for 2D phased-array probes design optimization.
Matrone, Giulia; Quaglia, Fabio; Magenes, Giovanni
2011-01-01
Nowadays, ultrasound diagnostic imaging is one of the non-invasive techniques mostly used in the clinical practice. Recent advances in this field have brought to the development of small and portable systems. New bidimensional probes consisting of 2D phased arrays, allow to obtain real-time 3D representations of moving organs and blood vessels anatomy. Being the complexity of such 4D ultrasound imaging systems significantly increased, new challenges concerning electronics integration arise for designers. In this paper a software simulator is described, which has been developed in order to model ultrasound wave generation, pressure field distribution and echoes reception, with the aim to become a useful tool for optimizing the probe design. The paper mainly focuses on linear ultrasound field modeling; preliminary results on non-linear interactions with contrast agents are also here introduced.
Catalog of velocity distributions around a reconnection site in 2D PIC simulations
NASA Astrophysics Data System (ADS)
Lechner, Lukas; Bourdin, Philippe-A.; Nakamura, Takuma K. M.; Nakamura, Rumi; Narita, Yasuhito
2016-04-01
The velocity distribution of electrons and ions are known to be a marker for regions where magnetic reconnection develops. Past theoretical and computational works demonstrated that non-gyrotropic and anisotropic distributions depending on particle meandering motions and accelerations are seen around the reconnection point. The Magnetospheric Multiscale (MMS) mission is expected to resolve such kinetic scale reconnection regions. We present a catalog of velocity distribution functions that can give hints on the location within the current sheet relative to the reconnection point, which is sometimes unclear from pure spacecraft observations. We use 2D PIC simulations of anti-parallel magnetic reconnection to obtain velocity distributions at different locations, like in the center of the reconnection site, the ion and electron diffusion regions, or the reconnection inflow and outflow regions. With sufficiently large number of particles we resolve the distribution functions also in rather small regions. Such catalog may be compared with future MMS observations of the Earth's magnetotail.
NASA Astrophysics Data System (ADS)
Li, Jinghe; Song, Linping; Liu, Qing Huo
2016-02-01
A simultaneous multiple frequency contrast source inversion (CSI) method is applied to reconstructing hydrocarbon reservoir targets in a complex multilayered medium in two dimensions. It simulates the effects of a salt dome sedimentary formation in the context of reservoir monitoring. In this method, the stabilized biconjugate-gradient fast Fourier transform (BCGS-FFT) algorithm is applied as a fast solver for the 2D volume integral equation for the forward computation. The inversion technique with CSI combines the efficient FFT algorithm to speed up the matrix-vector multiplication and the stable convergence of the simultaneous multiple frequency CSI in the iteration process. As a result, this method is capable of making quantitative conductivity image reconstruction effectively for large-scale electromagnetic oil exploration problems, including the vertical electromagnetic profiling (VEP) survey investigated here. A number of numerical examples have been demonstrated to validate the effectiveness and capacity of the simultaneous multiple frequency CSI method for a limited array view in VEP.
Hall-Effect Thruster Simulations with 2-D Electron Transport and Hydrodynamic Ions
NASA Technical Reports Server (NTRS)
Mikellides, Ioannis G.; Katz, Ira; Hofer, Richard H.; Goebel, Dan M.
2009-01-01
A computational approach that has been used extensively in the last two decades for Hall thruster simulations is to solve a diffusion equation and energy conservation law for the electrons in a direction that is perpendicular to the magnetic field, and use discrete-particle methods for the heavy species. This "hybrid" approach has allowed for the capture of bulk plasma phenomena inside these thrusters within reasonable computational times. Regions of the thruster with complex magnetic field arrangements (such as those near eroded walls and magnets) and/or reduced Hall parameter (such as those near the anode and the cathode plume) challenge the validity of the quasi-one-dimensional assumption for the electrons. This paper reports on the development of a computer code that solves numerically the 2-D axisymmetric vector form of Ohm's law, with no assumptions regarding the rate of electron transport in the parallel and perpendicular directions. The numerical challenges related to the large disparity of the transport coefficients in the two directions are met by solving the equations in a computational mesh that is aligned with the magnetic field. The fully-2D approach allows for a large physical domain that extends more than five times the thruster channel length in the axial direction, and encompasses the cathode boundary. Ions are treated as an isothermal, cold (relative to the electrons) fluid, accounting for charge-exchange and multiple-ionization collisions in the momentum equations. A first series of simulations of two Hall thrusters, namely the BPT-4000 and a 6-kW laboratory thruster, quantifies the significance of ion diffusion in the anode region and the importance of the extended physical domain on studies related to the impact of the transport coefficients on the electron flow field.
Hall-Effect Thruster Simulations with 2-D Electron Transport and Hydrodynamic Ions
NASA Technical Reports Server (NTRS)
Mikellides, Ioannis G.; Katz, Ira; Hofer, Richard H.; Goebel, Dan M.
2009-01-01
A computational approach that has been used extensively in the last two decades for Hall thruster simulations is to solve a diffusion equation and energy conservation law for the electrons in a direction that is perpendicular to the magnetic field, and use discrete-particle methods for the heavy species. This "hybrid" approach has allowed for the capture of bulk plasma phenomena inside these thrusters within reasonable computational times. Regions of the thruster with complex magnetic field arrangements (such as those near eroded walls and magnets) and/or reduced Hall parameter (such as those near the anode and the cathode plume) challenge the validity of the quasi-one-dimensional assumption for the electrons. This paper reports on the development of a computer code that solves numerically the 2-D axisymmetric vector form of Ohm's law, with no assumptions regarding the rate of electron transport in the parallel and perpendicular directions. The numerical challenges related to the large disparity of the transport coefficients in the two directions are met by solving the equations in a computational mesh that is aligned with the magnetic field. The fully-2D approach allows for a large physical domain that extends more than five times the thruster channel length in the axial direction, and encompasses the cathode boundary. Ions are treated as an isothermal, cold (relative to the electrons) fluid, accounting for charge-exchange and multiple-ionization collisions in the momentum equations. A first series of simulations of two Hall thrusters, namely the BPT-4000 and a 6-kW laboratory thruster, quantifies the significance of ion diffusion in the anode region and the importance of the extended physical domain on studies related to the impact of the transport coefficients on the electron flow field.
NASA Astrophysics Data System (ADS)
Liu, Gui-Rong; Wang, Gangyu; Peng, Qing; de, Suvranu
2015-06-01
HMX is a widely used high explosive. Hugoniot curve is a valuable tool for analyzing the equations of state, and is of importance for all energetic materials including HMX. The Hugoniot curves serve as one of the key character in continuum modeling of high explosives. It can be obtained from experimental measurements, and recently also from computational studies. In this study, the Hugoniot curve of HMX is calculated using a multi-scale shock technique via Molecular Dynamics (MD) simulations, where the reactive force field ReaxFF is obtained from Quantum Mechanics calculations and tailored for HMX. It is found that our MD Hugoniot curve of HMX from the optimized ReaxFF potential agree well with experiments. The MD Hugoniot curve of HMX is also incorporated in our in-house Smoothed Particle Hydrodynamics (SPH) code for the modeling of the macro-scale explosive behaviors of HMX explosives and HMX cased in a 3D cylinder. The authors would like to acknowledge the generous financial support from the Defense Threat Reduction Agency (DTRA) Grant HDTRA1-13-1-0025.
What Can We Learn about Magnetotail Reconnection from 2D PIC Harris-Sheet Simulations?
NASA Astrophysics Data System (ADS)
Goldman, M. V.; Newman, D. L.; Lapenta, G.
2016-03-01
The Magnetosphere Multiscale Mission (MMS) will provide the first opportunity to probe electron-scale physics during magnetic reconnection in Earth's magnetopause and magnetotail. This article will address only tail reconnection—as a non-steady-state process in which the first reconnected field lines advance away from the x-point in flux pile-up fronts directed Earthward and anti-Earthward. An up-to-date microscopic physical picture of electron and ion-scale collisionless tail reconnection processes is presented based on 2-D Particle-In-Cell (PIC) simulations initiated from a Harris current sheet and on Cluster and Themis measurements of tail reconnection. The successes and limitations of simulations when compared to measured reconnection are addressed in detail. The main focus is on particle and field diffusion region signatures in the tail reconnection geometry. The interpretation of these signatures is vital to enable spacecraft to identify physically significant reconnection events, to trigger meaningful data transfer from MMS to Earth and to construct a useful overall physical picture of tail reconnection. New simulation results and theoretical interpretations are presented for energy transport of particles and fields, for the size and shape of electron and ion diffusion regions, for processes occurring near the fronts and for the j × B (Hall) electric field.
Element soil behaviour during pile installation simulated by 2D-DEM
NASA Astrophysics Data System (ADS)
Ji, Xiaohui; Cheng, Yi Pik; Liu, Junwei
2017-06-01
The estimation of the skin friction of onshore or offshore piles in sand is still a difficult problem for geotechnical engineers. It has been accepted by many researchers that the mechanism of driving piles in the soil has shared some similarities with that of an element shear test under the constant normal stiffness (CNS) condition. This paper describes the behaviour of an element of soil next to a pile during the process of pile penetration into dense fine sand using the 2D-DEM numerical simulation software. A new CNS servo was added to the horizontal boundary while maintaining the vertical stress constant. This should simulate the soil in a similar manner to that of a CNS pile-soil interface shear test, but allowing the vertical stress to remain constant which is more realistic to the field situation. Shear behaviours observed in these simulations were very similar to the results from previous researchers' lab shearing tests. With the normal stress and shear stress obtained from the virtual models, the friction angle and the shaft friction factor β mentioned in the API-2007 offshore pile design guideline were calculated and compared with the API recommended values.
NASA Astrophysics Data System (ADS)
Simmons, Daniel; Cools, Kristof; Sewell, Phillip
2016-11-01
Time domain electromagnetic simulation tools have the ability to model transient, wide-band applications, and non-linear problems. The Boundary Element Method (BEM) and the Transmission Line Modeling (TLM) method are both well established numerical techniques for simulating time-varying electromagnetic fields. The former surface based method can accurately describe outwardly radiating fields from piecewise uniform objects and efficiently deals with large domains filled with homogeneous media. The latter volume based method can describe inhomogeneous and non-linear media and has been proven to be unconditionally stable. Furthermore, the Unstructured TLM (UTLM) enables modelling of geometrically complex objects by using triangular meshes which removes staircasing and unnecessary extensions of the simulation domain. The hybridization of BEM and UTLM which is described in this paper is named the Boundary Element Unstructured Transmission-line (BEUT) method. It incorporates the advantages of both methods. The theory and derivation of the 2D BEUT method is described in this paper, along with any relevant implementation details. The method is corroborated by studying its correctness and efficiency compared to the traditional UTLM method when applied to complex problems such as the transmission through a system of Luneburg lenses and the modelling of antenna radomes for use in wireless communications.
Simmons, Daniel Cools, Kristof; Sewell, Phillip
2016-11-01
Time domain electromagnetic simulation tools have the ability to model transient, wide-band applications, and non-linear problems. The Boundary Element Method (BEM) and the Transmission Line Modeling (TLM) method are both well established numerical techniques for simulating time-varying electromagnetic fields. The former surface based method can accurately describe outwardly radiating fields from piecewise uniform objects and efficiently deals with large domains filled with homogeneous media. The latter volume based method can describe inhomogeneous and non-linear media and has been proven to be unconditionally stable. Furthermore, the Unstructured TLM (UTLM) enables modelling of geometrically complex objects by using triangular meshes which removes staircasing and unnecessary extensions of the simulation domain. The hybridization of BEM and UTLM which is described in this paper is named the Boundary Element Unstructured Transmission-line (BEUT) method. It incorporates the advantages of both methods. The theory and derivation of the 2D BEUT method is described in this paper, along with any relevant implementation details. The method is corroborated by studying its correctness and efficiency compared to the traditional UTLM method when applied to complex problems such as the transmission through a system of Luneburg lenses and the modelling of antenna radomes for use in wireless communications. - Graphical abstract:.
Simulation of abrasive flow machining process for 2D and 3D mixture models
NASA Astrophysics Data System (ADS)
Dash, Rupalika; Maity, Kalipada
2015-12-01
Improvement of surface finish and material removal has been quite a challenge in a finishing operation such as abrasive flow machining (AFM). Factors that affect the surface finish and material removal are media viscosity, extrusion pressure, piston velocity, and particle size in abrasive flow machining process. Performing experiments for all the parameters and accurately obtaining an optimized parameter in a short time are difficult to accomplish because the operation requires a precise finish. Computational fluid dynamics (CFD) simulation was employed to accurately determine optimum parameters. In the current work, a 2D model was designed, and the flow analysis, force calculation, and material removal prediction were performed and compared with the available experimental data. Another 3D model for a swaging die finishing using AFM was simulated at different viscosities of the media to study the effects on the controlling parameters. A CFD simulation was performed by using commercially available ANSYS FLUENT. Two phases were considered for the flow analysis, and multiphase mixture model was taken into account. The fluid was considered to be a
A new model for two-dimensional numerical simulation of pseudo-2D gas-solids fluidized beds
Li, Tingwen; Zhang, Yongmin
2013-10-11
Pseudo-two dimensional (pseudo-2D) fluidized beds, for which the thickness of the system is much smaller than the other two dimensions, is widely used to perform fundamental studies on bubble behavior, solids mixing, or clustering phenomenon in different gas-solids fluidization systems. The abundant data from such experimental systems are very useful for numerical model development and validation. However, it has been reported that two-dimensional (2D) computational fluid dynamic (CFD) simulations of pseudo-2D gas-solids fluidized beds usually predict poor quantitative agreement with the experimental data, especially for the solids velocity field. In this paper, a new model is proposed to improve the 2D numerical simulations of pseudo-2D gas-solids fluidized beds by properly accounting for the frictional effect of the front and back walls. Two previously reported pseudo-2D experimental systems were simulated with this model. Compared to the traditional 2D simulations, significant improvements in the numerical predictions have been observed and the predicted results are in better agreement with the available experimental data.
Advancing Nucleosynthesis in Core-Collapse Supernovae Models Using 2D CHIMERA Simulations
NASA Astrophysics Data System (ADS)
Harris, J. A.; Hix, W. R.; Chertkow, M. A.; Bruenn, S. W.; Lentz, E. J.; Messer, O. B.; Mezzacappa, A.; Blondin, J. M.; Marronetti, P.; Yakunin, K.
2014-01-01
The deaths of massive stars as core-collapse supernovae (CCSN) serve as a crucial link in understanding galactic chemical evolution since the birth of the universe via the Big Bang. We investigate CCSN in polar axisymmetric simulations using the multidimensional radiation hydrodynamics code CHIMERA. Computational costs have traditionally constrained the evolution of the nuclear composition in CCSN models to, at best, a 14-species α-network. However, the limited capacity of the α-network to accurately evolve detailed composition, the neutronization and the nuclear energy generation rate has fettered the ability of prior CCSN simulations to accurately reproduce the chemical abundances and energy distributions as known from observations. These deficits can be partially ameliorated by "post-processing" with a more realistic network. Lagrangian tracer particles placed throughout the star record the temporal evolution of the initial simulation and enable the extension of the nuclear network evolution by incorporating larger systems in post-processing nucleosynthesis calculations. We present post-processing results of the four ab initio axisymmetric CCSN 2D models of Bruenn et al. (2013) evolved with the smaller α-network, and initiated from stellar metallicity, non-rotating progenitors of mass 12, 15, 20, and 25 M⊙ from Woosley & Heger (2007). As a test of the limitations of post-processing, we provide preliminary results from an ongoing simulation of the 15 M⊙ model evolved with a realistic 150 species nuclear reaction network in situ. With more accurate energy generation rates and an improved determination of the thermodynamic trajectories of the tracer particles, we can better unravel the complicated multidimensional "mass-cut" in CCSN simulations and probe for less energetically significant nuclear processes like the νp-process and the r-process, which require still larger networks.
Application of 2-D simulations to hollow Z-pinch implosions
Peterson, D. L.; Bowers, R. L.; Brownell, J. H.; Lund, C.; Matuska, W.; McLenithan, K.; Oona, H.; Deeney, C.; Derzon, M.; Spielman, R. B.; Nash, T. J.; Chandler, G.; Mock, R. C.; Sanford, T. W. L.; Matzen, M. K.; Roderick, N. F.
1997-05-05
The application of simulations of z-pinch implosions should have at least two goals: first, to properly model the most important physical processes occurring in the pinch allowing for a better understanding of the experiments and second, provide a design capability for future experiments. Beginning with experiments fielded at Los Alamos on the Pegasus I and Pegasus II capacitor banks, we have developed a methodology for simulating hollow z-pinches in two dimensions which has reproduced important features of the measured experimental current drive, spectrum, radiation pulse shape, peak power and total radiated energy (1,2,3). This methodology employs essentially one free parameter, the initial level of the random density perturbations imposed at the beginning of the 2-D simulation, but in general no adjustments to other parameters (such as the resistivity) are required (1). Limitations in the use of this approach include the use of the 3-T, gray diffusion treatment of radiation and the fact that the initial perturbation conditions are not known a priori. Nonetheless, the approach has been successful in reproducing important experimental features of such implosions over a wide variety of timescales (tens of nanoseconds to microseconds), current drives (3 to 16 MA), masses (submilligram to tens of milligrams), initial radii (<1 cm to 5 cm), materials (Al and W) and initial configurations (thin foils and wire arrays with 40 to 240 wires). Currently we are applying this capability to the analysis of recent Saturn and PBFA-Z experiments (4,5). The code results provide insight into the nature of the pinch plasma prior to arrival on-axis, during thermalization and development after peak pinch time. Among other things, the simulation results provide an explanation for the production of larger amounts of radiated energy than would be expected from a simple slug-model kinetic energy analysis and the appearance of multiple peaks in the radiation power. The 2-D modeling has
Application of 2-D simulations to hollow Z-pinch implosions
Peterson, D.L.; Bowers, R.L.; Brownell, J.H.; Lund, C.; Matuska, W.; McLenithan, K.; Oona, H.; Deeney, C.; Derzon, M.; Spielman, R.B.; Nash, T.J.; Chandler, G.; Mock, R.C.; Sanford, T.W.; Matzen, M.K.; Roderick, N.F.
1997-05-01
The application of simulations of z-pinch implosions should have at least two goals: first, to properly model the most important physical processes occurring in the pinch allowing for a better understanding of the experiments and second, provide a design capability for future experiments. Beginning with experiments fielded at Los Alamos on the Pegasus I and Pegasus II capacitor banks, we have developed a methodology for simulating hollow z-pinches in two dimensions which has reproduced important features of the measured experimental current drive, spectrum, radiation pulse shape, peak power and total radiated energy (1,2,3). This methodology employs essentially one free parameter, the initial level of the random density perturbations imposed at the beginning of the 2-D simulation, but in general no adjustments to other parameters (such as the resistivity) are required (1). Limitations in the use of this approach include the use of the 3-T, gray diffusion treatment of radiation and the fact that the initial perturbation conditions are not known {ital a priori}. Nonetheless, the approach has been successful in reproducing important experimental features of such implosions over a wide variety of timescales (tens of nanoseconds to microseconds), current drives (3 to 16 MA), masses (submilligram to tens of milligrams), initial radii ({lt}1cm to 5 cm), materials (Al and W) and initial configurations (thin foils and wire arrays with 40 to 240 wires). Currently we are applying this capability to the analysis of recent Saturn and PBFA-Z experiments (4,5). The code results provide insight into the nature of the pinch plasma prior to arrival on-axis, during thermalization and development after peak pinch time. Among other things, the simulation results provide an explanation for the production of larger amounts of radiated energy than would be expected from a simple slug-model kinetic energy analysis and the appearance of multiple peaks in the radiation power. The 2-D
Multi-phase SPH modelling of violent hydrodynamics on GPUs
NASA Astrophysics Data System (ADS)
Mokos, Athanasios; Rogers, Benedict D.; Stansby, Peter K.; Domínguez, José M.
2015-11-01
This paper presents the acceleration of multi-phase smoothed particle hydrodynamics (SPH) using a graphics processing unit (GPU) enabling large numbers of particles (10-20 million) to be simulated on just a single GPU card. With novel hardware architectures such as a GPU, the optimum approach to implement a multi-phase scheme presents some new challenges. Many more particles must be included in the calculation and there are very different speeds of sound in each phase with the largest speed of sound determining the time step. This requires efficient computation. To take full advantage of the hardware acceleration provided by a single GPU for a multi-phase simulation, four different algorithms are investigated: conditional statements, binary operators, separate particle lists and an intermediate global function. Runtime results show that the optimum approach needs to employ separate cell and neighbour lists for each phase. The profiler shows that this approach leads to a reduction in both memory transactions and arithmetic operations giving significant runtime gains. The four different algorithms are compared to the efficiency of the optimised single-phase GPU code, DualSPHysics, for 2-D and 3-D simulations which indicate that the multi-phase functionality has a significant computational overhead. A comparison with an optimised CPU code shows a speed up of an order of magnitude over an OpenMP simulation with 8 threads and two orders of magnitude over a single thread simulation. A demonstration of the multi-phase SPH GPU code is provided by a 3-D dam break case impacting an obstacle. This shows better agreement with experimental results than an equivalent single-phase code. The multi-phase GPU code enables a convergence study to be undertaken on a single GPU with a large number of particles that otherwise would have required large high performance computing resources.
2D PIC simulations of a curved supercritical shock: dynamics of the whistler precursor
NASA Astrophysics Data System (ADS)
Stienlet, J.; Lembege, B.; Savoini, P.
2009-12-01
The whistler precursor emitted from the curved terrestrial shock front plays an important role in pre-decelerating and heating the incoming solar wind. Most previous works have mainly analyzed the features of the whistler precursor emission for a 1D planar shock where it is forced to propagate along the shock normal (Liewer and al, 1991) or to propagate obliquely with respect to a fixed shock normal direction in 2D planar shock simulation (Krauss-Varban et al., 1995). In the present case, the dynamics of the precursor is analyzed for a full curved shock with the help of a 2D full particle simulation where full curvature effects and both electrons and ions dynamics are described by a self consistent approach. Curvature effects continously cover all shock normal directions within the angular range 90° ≤ θBn ≤ 45° where θBn is the angle between the shock normal and the upstream magnetostatic field. This approach allows a free accessibility of the whistler precursor to a large angular range without any constraint. Preliminary results show that : (i) the whistler precursor strongly extends far from the shock front mainly along the magnetostatic field (projected on the simulation plane) but this extension is progressively reduced outside this privileged direction; (ii) wave fronts of the whistler precursor have a curvature similar to that of the main curved shock front but the width of these curved wave fronts strongly decreases when moving far from the shock front; (iii) near the shock front, the precursor is emitted within an angular range much larger than that predicted by linear theory; (iv) the critical angle of occurrence of the precursor fits with the theoretical value expected from Krasnoselskikh et al. (2002) model but this angle is not associated to a transition between stationary and non-stationary shocks in contrast with a statement announced by this theoretical model; and (v) the damping rate of the whistler precursor is analyzed for different
Transport simulations of the C-2 and C-2U Field Reversed Configurations with the Q2D code
NASA Astrophysics Data System (ADS)
Onofri, Marco; Dettrick, Sean; Barnes, Daniel; Tajima, Toshiki; TAE Team
2016-10-01
The Q2D code is a 2D MHD code, which includes a neutral fluid and separate ion and electron temperatures, coupled with a 3D Monte Carlo code, which is used to calculate source terms due to neutral beams. Q2D has been benchmarked against the 1D transport code Q1D and is used to simulate the evolution of the C-2 and C-2U field reversed configuration experiments [1]. Q2D simulations start from an initial equilibrium and transport coefficients are chosen to match C-2 experimental data. C-2U is an upgrade of C-2, with more beam power and angled beam injection, which demonstrates plasma sustainment for 5 + ms. The simulations use the same transport coefficients for C-2 and C-2U, showing the formation of a steady state in C-2U, sustained by fast ion pressure and current drive.
Simulation and analysis of solute transport in 2D fracture/pipe networks: The SOLFRAC program
NASA Astrophysics Data System (ADS)
Bodin, Jacques; Porel, Gilles; Delay, Fred; Ubertosi, Fabrice; Bernard, Stéphane; de Dreuzy, Jean-Raynald
2007-01-01
The Time Domain Random Walk (TDRW) method has been recently developed by Delay and Bodin [Delay, F. and Bodin, J., 2001. Time domain random walk method to simulate transport by advection-dispersion and matrix diffusion in fracture networks. Geophys. Res. Lett., 28(21): 4051-4054.] and Bodin et al. [Bodin, J., Porel, G. and Delay, F., 2003c. Simulation of solute transport in discrete fracture networks using the time domain random walk method. Earth Planet. Sci. Lett., 6566: 1-8.] for simulating solute transport in discrete fracture networks. It is assumed that the fracture network can reasonably be represented by a network of interconnected one-dimensional pipes (i.e. flow channels). Processes accounted for are: (1) advection and hydrodynamic dispersion in the channels, (2) matrix diffusion, (3) diffusion into stagnant zones within the fracture planes, (4) sorption reactions onto the fracture walls and in the matrix, (5) linear decay, and (6) mass sharing at fracture intersections. The TDRW method is handy and very efficient in terms of computation costs since it allows for the one-step calculation of the particle residence time in each bond of the network. This method has been programmed in C++, and efforts have been made to develop an efficient and user-friendly software, called SOLFRAC. This program is freely downloadable at the URL http://labo.univ-poitiers.fr/hydrasa/intranet/telechargement.htm. It calculates solute transport into 2D pipe networks, while considering different types of injections and different concepts of local dispersion within each flow channel. Post-simulation analyses are also available, such as the mean velocity or the macroscopic dispersion at the scale of the entire network. The program may be used to evaluate how a given transport mechanism influences the macroscopic transport behaviour of fracture networks. It may also be used, as is the case, e.g., with analytical solutions, to interpret laboratory or field tracer test experiments
Simulation and analysis of solute transport in 2D fracture/pipe networks: the SOLFRAC program.
Bodin, Jacques; Porel, Gilles; Delay, Fred; Ubertosi, Fabrice; Bernard, Stéphane; de Dreuzy, Jean-Raynald
2007-01-05
The Time Domain Random Walk (TDRW) method has been recently developed by Delay and Bodin [Delay, F. and Bodin, J., 2001. Time domain random walk method to simulate transport by advection-dispersion and matrix diffusion in fracture networks. Geophys. Res. Lett., 28(21): 4051-4054.] and Bodin et al. [Bodin, J., Porel, G. and Delay, F., 2003c. Simulation of solute transport in discrete fracture networks using the time domain random walk method. Earth Planet. Sci. Lett., 6566: 1-8.] for simulating solute transport in discrete fracture networks. It is assumed that the fracture network can reasonably be represented by a network of interconnected one-dimensional pipes (i.e. flow channels). Processes accounted for are: (1) advection and hydrodynamic dispersion in the channels, (2) matrix diffusion, (3) diffusion into stagnant zones within the fracture planes, (4) sorption reactions onto the fracture walls and in the matrix, (5) linear decay, and (6) mass sharing at fracture intersections. The TDRW method is handy and very efficient in terms of computation costs since it allows for the one-step calculation of the particle residence time in each bond of the network. This method has been programmed in C++, and efforts have been made to develop an efficient and user-friendly software, called SOLFRAC. This program is freely downloadable at the URL (labo.univ-poitiers.fr/hydrasa/intranet/telechargement.htm). It calculates solute transport into 2D pipe networks, while considering different types of injections and different concepts of local dispersion within each flow channel. Post-simulation analyses are also available, such as the mean velocity or the macroscopic dispersion at the scale of the entire network. The program may be used to evaluate how a given transport mechanism influences the macroscopic transport behaviour of fracture networks. It may also be used, as is the case, e.g., with analytical solutions, to interpret laboratory or field tracer test experiments performed
1D and 2D simulations of seismic wave propagation in fractured media
NASA Astrophysics Data System (ADS)
Möller, Thomas; Friederich, Wolfgang
2016-04-01
Fractures and cracks have a significant influence on the propagation of seismic waves. Their presence causes reflections and scattering and makes the medium effectively anisotropic. We present a numerical approach to simulation of seismic waves in fractured media that does not require direct modelling of the fracture itself, but uses the concept of linear slip interfaces developed by Schoenberg (1980). This condition states that at an interface between two imperfectly bonded elastic media, stress is continuous across the interface while displacement is discontinuous. It is assumed that the jump of displacement is proportional to stress which implies a jump in particle velocity at the interface. We use this condition as a boundary condition to the elastic wave equation and solve this equation in the framework of a Nodal Discontinuous Galerkin scheme using a velocity-stress formulation. We use meshes with tetrahedral elements to discretise the medium. Each individual element face may be declared as a slip interface. Numerical fluxes have been derived by solving the 1D Riemann problem for slip interfaces with elastic and viscoelastic rheology. Viscoelasticity is realised either by a Kelvin-Voigt body or a Standard Linear Solid. These fluxes are not limited to 1D and can - with little modification - be used for simulations in higher dimensions as well. The Nodal Discontinuous Galerkin code "neXd" developed by Lambrecht (2013) is used as a basis for the numerical implementation of this concept. We present examples of simulations in 1D and 2D that illustrate the influence of fractures on the seismic wavefield. We demonstrate the accuracy of the simulation through comparison to an analytical solution in 1D.
2D Numerical Simulation of Fluvial Hydrodynamics and Bed Morphological Changes
NASA Astrophysics Data System (ADS)
Safarzadeh, A.; Neyshabouri, A. A. Salehi; Dehkordi, A. N.
2009-08-01
In this paper, the application of numerical simulation for Computational Fluid Dynamics (CFD) in river Hydrodynamics is represented. In this regard, a case study was carried out in an intended area along the Karoun River-Iran, using the CFD model, CCHE-2D. After giving the geometry domain of the field under the study, the depth-averaged Reynolds approximation of the Navier-Stokes equations, were employed to solve the flow field. Furthermore, the standard k-ɛ turbulence model was used to simulate Reynolds's shear stresses and to close the governing equation systems. A finite element procedure was used in order to solve the equations. Applied equations were used to consider the effects of secondary flows on flow field at meandering reaches. The sedimentary transport assuming non-uniform material at a non-equilibrium state was calculated. The depth-integrated convection-diffusion equation of the suspended load transport and the continuity equation of bed load were solved. When the non-equilibrium transport model is adopted for bed load, the calculation of bed change determined by the overall sediment continuity equation. To verify the numerical results, Stage-Discharge curves resulted from the numerical simulation was compared with the measured data at the Karoun hydrometric station and the qualitative erosion pattern is compared with the river sedimentary process. Comparisons show the results balance. The data obtained also show that the used model has an efficient capability in river engineering simulations, especially in predicting flow field. Furthermore, the erosion and sedimentary pattern of the region show the high erosive characteristics of the studied area in the river against probable floods.
2D Kinetic Particle in Cell Simulations of a Shear-Flow Stabilized Z-Pinch
NASA Astrophysics Data System (ADS)
Tummel, Kurt; Higginson, Drew; Schmidt, Andrea; Link, Anthony; McLean, Harry; Shumlak, Uri; Nelson, Brian; Golingo, Raymond; Claveau, Elliot; Lawrence Livermore National Lab Team; University of Washington Team
2016-10-01
The Z-pinch is a relatively simple and attractive potential fusion reactor design, but attempts to develop such a reactor have consistently struggled to overcome Z-pinch instabilities. The ``sausage'' and ``kink'' modes are among the most robust and prevalent Z-pinch instabilities, but theory and simulations suggest that axial flow-shear, dvz / dr ≠ 0 , can suppress these modes. Experiments have confirmed that Z-pinch plasmas with embedded axial flow-shear display a significantly enhanced resilience to the sausage and kink modes at a demonstration current of 50kAmps. A new experiment is under way to test the concept at higher current, and efforts to model these plasmas are being expanded. The performance and stability of these devices will depend on features like the plasma viscosity, anomalous resistivity, and finite Larmor radius effects, which are most accurately characterized in kinetic models. To predict these features, kinetic simulations using the particle in cell code LSP are now in development, and initial benchmarking and 2D stability analyses of the sausage mode are presented here. These results represent the first kinetic modeling of the flow-shear stabilized Z-pinch. This work is funded by the USDOE/ARPAe Alpha Program. Prepared by LLNL under Contract DE-AC52-07NA27344.
Observed and simulated power spectra of kinetic and magnetic energy retrieved with 2D inversions
NASA Astrophysics Data System (ADS)
Danilovic, S.; Rempel, M.; van Noort, M.; Cameron, R.
2016-10-01
Context. Information on the origin of internetwork magnetic field is hidden at the smallest spatial scales. Aims: We try to retrieve the power spectra with certainty to the highest spatial frequencies allowed by current instrumentation. Methods: To accomplish this, we use a 2D inversion code that is able to recover information up to the instrumental diffraction limit. Results: The retrieved power spectra have shallow slopes that extend further down to much smaller scales than has been found before. They do not seem to show any power law. The observed slopes at subgranular scales agree with those obtained from recent local dynamo simulations. Small differences are found for the vertical component of kinetic energy that suggest that observations suffer from an instrumental effect that is not taken into account. Conclusions: Local dynamo simulations quantitatively reproduce the observed magnetic energy power spectra on the scales of granulation down to the resolution limit of Hinode/SP, within the error bars inflicted by the method used and the instrumental effects replicated.
Multi-GPU accelerated multi-spin Monte Carlo simulations of the 2D Ising model
NASA Astrophysics Data System (ADS)
Block, Benjamin; Virnau, Peter; Preis, Tobias
2010-09-01
A Modern Graphics Processing unit (GPU) is able to perform massively parallel scientific computations at low cost. We extend our implementation of the checkerboard algorithm for the two-dimensional Ising model [T. Preis et al., Journal of Chemical Physics 228 (2009) 4468-4477] in order to overcome the memory limitations of a single GPU which enables us to simulate significantly larger systems. Using multi-spin coding techniques, we are able to accelerate simulations on a single GPU by factors up to 35 compared to an optimized single Central Processor Unit (CPU) core implementation which employs multi-spin coding. By combining the Compute Unified Device Architecture (CUDA) with the Message Parsing Interface (MPI) on the CPU level, a single Ising lattice can be updated by a cluster of GPUs in parallel. For large systems, the computation time scales nearly linearly with the number of GPUs used. As proof of concept we reproduce the critical temperature of the 2D Ising model using finite size scaling techniques.
Some features of auroral electric fields as seen in 2D numerical simulations
NASA Technical Reports Server (NTRS)
Thiemann, H.; Singh, N.; Schunk, R. W.
1984-01-01
Results of 2D plasma simulations are presented and related to auroral observations. The formation of V-shaped potentials is studied with a 2 1/2 dimensional electrostatic particle-in-cell code for a magnetized plasma. It is shown that amplitudes for perpendicular electric fields are larger than for parallel electric fields, and for Te less than 100 eV, the amplitudes are comparable to the electric fields associated with the electrostatic shocks observed from the S3-3 satellite. The excitation of electrostatic ion-cyclotron EIC waves which occurs in the region below the parallel potential drop is discussed. In auroral plasmas EIC waves are observed above the V-shaped double layers in association with ion beams and field-aligned currents. The results also show that oppositely directed electric fields in the center and at the edges of the simulation region produce oppositely directed currents. Precipitating auroral ions in association with electron inverted-V events are seen by the DMSP-F6 satellite.
Extended MHD simulations of Rayleigh-Taylor instability with real frequency in a 2D slab
NASA Astrophysics Data System (ADS)
Goto, Ryosuke; Miura, Hideaki; Ito, Atsushi; Sato, Masahiko; Hatori, Tomoharu
2014-10-01
Small scale effects such as the Finite Larmor Radius (FLR) effect and the Hall term can change the linear and non-linear growth of the high wave number unstable modes of the pressure driven instability considerably. Here we consider a simple Rayleigh-Taylor (R-T) instability in a 2D slab, and study the effect of the Hall term and the FLR effect to the R-T instability by means of numerical simulations of the Braginskii-type extended MHD equations. As we have reported earlier, the linear growth rates of the high wave number modes are highly reduced when the Hall term and the FLR effect are added simultaneously. However, there appears little real frequency in the previous work. Since the diamagnetic drift associated with the real frequency is considered to affect the growth of the linear and nonlinear evolutions, we provide a new equilibrium in which appearance of the real frequency is expected and carry out numerical simulations. Influences of the real frequency on the growth rates as well as on the nonlinear mixing width for some combinations of the Hall and the FLR parameters are going to be presented.
2D IR spectra of cyanide in water investigated by molecular dynamics simulations
Lee, Myung Won; Carr, Joshua K.; Göllner, Michael; Hamm, Peter; Meuwly, Markus
2013-01-01
Using classical molecular dynamics simulations, the 2D infrared (IR) spectroscopy of CN− solvated in D2O is investigated. Depending on the force field parametrizations, most of which are based on multipolar interactions for the CN− molecule, the frequency-frequency correlation function and observables computed from it differ. Most notably, models based on multipoles for CN− and TIP3P for water yield quantitatively correct results when compared with experiments. Furthermore, the recent finding that T 1 times are sensitive to the van der Waals ranges on the CN− is confirmed in the present study. For the linear IR spectrum, the best model reproduces the full widths at half maximum almost quantitatively (13.0 cm−1 vs. 14.9 cm−1) if the rotational contribution to the linewidth is included. Without the rotational contribution, the lines are too narrow by about a factor of two, which agrees with Raman and IR experiments. The computed and experimental tilt angles (or nodal slopes) α as a function of the 2D IR waiting time compare favorably with the measured ones and the frequency fluctuation correlation function is invariably found to contain three time scales: a sub-ps, 1 ps, and one on the 10-ps time scale. These time scales are discussed in terms of the structural dynamics of the surrounding solvent and it is found that the longest time scale (≈10 ps) most likely corresponds to solvent exchange between the first and second solvation shell, in agreement with interpretations from nuclear magnetic resonance measurements.
2D properties of core turbulence on DIII-D and comparison to gyrokinetic simulations
Shafer, Morgan W; Fonck, R. J.; McKee, G. R.; Holland, Chris; White, A. E.; Schlossberg, D J
2012-01-01
Quantitative 2D characteristics of localized density fluctuations are presented over the range of 0.3 < r/a < 0.9 in L-mode plasmas on DIII-D [J. L. Luxon, Nucl. Fusion 42, 614 (2002)]. Broadband density fluctuations increase in amplitude from (n) over tilde/n < 0.5% in the deep core to (n) over tilde/n similar to 2.5% near the outer region. The observed Doppler-shift due to the E x B velocity matches well with the measured turbulence group and phase velocities (in toroidally rotating neutral beam heated plasmas). Turbulence decorrelation rates are found to be similar to 200 kHz at the edge and to decrease toward the core (0.45 < r/a < 0.9) where they approach the E x B shearing rate (similar to 50 kHz). Radial and poloidal correlation lengths are found to scale with the ion gyroradius and exhibit an asymmetric poloidally elongated eddy structure. The ensemble-averaged turbulent eddy structure changes its tilt with respect to the radial-poloidal coordinates in the core, consistent with an E x B shear mechanism. The 2D spatial correlation and wavenumber spectra [S(k(r); k(theta))] are presented and compared to nonlinear flux-tube GYRO simulations at two radii, r/a = 0.5 and r/a = 0.75, showing reasonable overall agreement, but the GYRO spectrum exhibits a peak at finite kr for r/a = 0.75 that is not observed experimentally; E x B shear may cause this discrepancy. (C) 2012 American Institute of Physics.
NASA Astrophysics Data System (ADS)
Jung, J.; Arakawa, A.
2015-12-01
Through explicitly resolved cloud-scale processes by embedded 2-D cloud-resolving models (CRMs), the Multiscale Modeling Framework (MMF) known as the superparameterization has been reasonably successful to simulate various atmospheric events over a wide range of time scales. One thing to be justified is, however, if the influence of complex 3-D topography can be adequately represented by the embedded 2-D CRMs. In this study, simulations are performed in the presence of a variety of topography with embedded 3-D and 2-D CRMs in a single-column inactive GCM. Through the comparison between these simulations, it is demonstrated that the 2-D representation of topography is able to simulate the statistics of precipitation due to 3-D topography reasonably well as long as the topographic characteristics, such as the mean and standard deviation, are closely recognized. It is also shown that the use of two perpendicular sets of 2-D representations tends to reduce the error due to a 2-D representation.
NASA Astrophysics Data System (ADS)
Borissov, A.; Kontar, E. P.; Threlfall, J.; Neukirch, T.
2017-09-01
The conversion of magnetic energy into other forms (such as plasma heating, bulk plasma flows, and non-thermal particles) during solar flares is one of the outstanding open problems in solar physics. It is generally accepted that magnetic reconnection plays a crucial role in these conversion processes. In order to achieve the rapid energy release required in solar flares, an anomalous resistivity, which is orders of magnitude higher than the Spitzer resistivity, is often used in magnetohydrodynamic (MHD) simulations of reconnection in the corona. The origin of Spitzer resistivity is based on Coulomb scattering, which becomes negligible at the high energies achieved by accelerated particles. As a result, simulations of particle acceleration in reconnection events are often performed in the absence of any interaction between accelerated particles and any background plasma. This need not be the case for scattering associated with anomalous resistivity caused by turbulence within solar flares, as the higher resistivity implies an elevated scattering rate. We present results of test particle calculations, with and without pitch angle scattering, subject to fields derived from MHD simulations of two-dimensional (2D) X-point reconnection. Scattering rates proportional to the ratio of the anomalous resistivity to the local Spitzer resistivity, as well as at fixed values, are considered. Pitch angle scattering, which is independent of the anomalous resistivity, causes higher maximum energies in comparison to those obtained without scattering. Scattering rates which are dependent on the local anomalous resistivity tend to produce fewer highly energised particles due to weaker scattering in the separatrices, even though scattering in the current sheet may be stronger when compared to resistivity-independent scattering. Strong scattering also causes an increase in the number of particles exiting the computational box in the reconnection outflow region, as opposed to along the
Cross Correlation between Ly-break Galaxies and Damped Lyα Systems in Cosmological SPH Simulations
NASA Astrophysics Data System (ADS)
Lee, Tae Song; Nagamine, K.
2007-12-01
We calculate the cross-correlation function (CCF) between damped Ly-α systems (DLAs) and Lyman break galaxies (LBGs) using cosmological hydrodynamic simulations at z=3. We compute the CCF in two different methods. First, we assume that there is one DLA in each dark matter halo. Second approach is the cross-section-weighted CCF using the direct simulation result of DLA cross section for each halo. We find that the cross-section-weighted CCF gives a steeper γ than the unweighted one, and agrees well with the result of Cooke et al. (2006). Finally, we compute angular CCF for direct comparison with observations.
Nordeck, Shaun M; Koerper, Conrad E; Adler, Aaron; Malhotra, Vidur; Xi, Yin; Liu, George T; Chhabra, Avneesh
2017-05-01
The purpose of this work is to simulate radiographs from isotropic 3D MRI data, compare relationship of angle and joint space measurements on simulated radiographs with corresponding 2D MRIs and real radiographs (XR), and compare measurement times among the three modalities. Twenty-four consecutive ankles were included, eight males and 16 females, with a mean age of 46 years. Segmented joint models simulating radiographs were created from 3D MRI data sets. Three readers independently performed blinded angle and joint space measurements on the models, corresponding 2D MRIs, and XRs at two time points. Linear mixed models and the intraclass correlation coefficient (ICC) was ascertained, with p values less than 0.05 considered significant. Simulated radiograph models were successfully created in all cases. Good agreement (ICC > 0.65) was noted among all readers across all modalities and among most measurements. Absolute measurement values differed between modalities. Measurement time was significantly greater (p < 0.05) on 2D versus simulated radiographs for most measurements and on XR versus simulated radiographs (p < 0.05) for nearly half the measurements. Simulated radiographs can be successfully generated from 3D MRI data; however, measurements differ. Good inter-reader and moderate-to-good intra-reader reliability was observed and measurements obtained on simulated radiograph models took significantly less time compared to measurements with 2D and generally less time than XR.
Modelling discontinuities and Kelvin Helmholtz instabilities in SPH
NASA Astrophysics Data System (ADS)
Price, Daniel J.
2008-12-01
In this paper we discuss the treatment of discontinuities in smoothed particle hydrodynamics (SPH) simulations. In particular we discuss the difference between integral and differential representations of the fluid equations in an SPH context and how this relates to the formulation of dissipative terms for the capture of shocks and other discontinuities. This has important implications for many problems, in particular related to recently highlighted problems in treating Kelvin Helmholtz instabilities across entropy gradients in SPH. The specific problems pointed out by Agertz et al. [O. Agertz, B. Moore, J. Stadel, D. Potter, F. Miniati, J. Read, L. Mayer, A. Gawryszczak, A. Kravtsov, Å. Nordlund, F. Pearce, V. Quilis, D. Rudd, V. Springel, J. Stone, E. Tasker, R. Teyssier, J. Wadsley, R. Walder, Fundamental differences between SPH and grid methods, MNRAS 380 (2007) 963 978] are shown to be related in particular to the (lack of) treatment of contact discontinuities in standard SPH formulations which can be cured by the simple application of an artificial thermal conductivity term. We propose a new formulation of artificial thermal conductivity in SPH which minimises dissipation away from discontinuities and can therefore be applied quite generally in SPH calculations.
Simulation of bootstrap current in 2D and 3D ideal magnetic fields in tokamaks
NASA Astrophysics Data System (ADS)
Raghunathan, M.; Graves, J. P.; Cooper, W. A.; Pedro, M.; Sauter, O.
2016-09-01
We aim to simulate the bootstrap current for a MAST-like spherical tokamak using two approaches for magnetic equilibria including externally caused 3D effects such as resonant magnetic perturbations (RMPs), the effect of toroidal ripple, and intrinsic 3D effects such as non-resonant internal kink modes. The first approach relies on known neoclassical coefficients in ideal MHD equilibria, using the Sauter (Sauter et al 1999 Phys. Plasmas 6 2834) expression valid for all collisionalities in axisymmetry, and the second approach being the quasi-analytic Shaing-Callen (Shaing and Callen 1983 Phys. Fluids 26 3315) model in the collisionless regime for 3D. Using the ideal free-boundary magnetohydrodynamic code VMEC, we compute the flux-surface averaged bootstrap current density, with the Sauter and Shaing-Callen expressions for 2D and 3D ideal MHD equilibria including an edge pressure barrier with the application of resonant magnetic perturbations, and equilibria possessing a saturated non-resonant 1/1 internal kink mode with a weak internal pressure barrier. We compare the applicability of the self-consistent iterative model on the 3D applications and discuss the limitations and advantages of each bootstrap current model for each type of equilibrium.
NASA Astrophysics Data System (ADS)
Schaerlaekens, J.; Mallants, D.; Imûnek, J.; van Genuchten, M. Th.; Feyen, J.
1999-12-01
Microbiological degradation of perchloroethylene (PCE) under anaerobic conditions follows a series of chain reactions, in which, sequentially, trichloroethylene (TCE), cis-dichloroethylene (c-DCE), vinylchloride (VC) and ethene are generated. First-order degradation rate constants, partitioning coefficients and mass exchange rates for PCE, TCE, c-DCE and VC were compiled from the literature. The parameters were used in a case study of pump-and-treat remediation of a PCE-contaminated site near Tilburg, The Netherlands. Transport, non-equilibrium sorption and biodegradation chain processes at the site were simulated using the CHAIN_2D code without further calibration. The modelled PCE compared reasonably well with observed PCE concentrations in the pumped water. We also performed a scenario analysis by applying several increased reductive dechlorination rates, reflecting different degradation conditions (e.g. addition of yeast extract and citrate). The scenario analysis predicted considerably higher concentrations of the degradation products as a result of enhanced reductive dechlorination of PCE. The predicted levels of the very toxic compound VC were now an order of magnitude above the maximum permissible concentration levels.
A density-adaptive SPH method with kernel gradient correction for modeling explosive welding
NASA Astrophysics Data System (ADS)
Liu, M. B.; Zhang, Z. L.; Feng, D. L.
2017-05-01
Explosive welding involves processes like the detonation of explosive, impact of metal structures and strong fluid-structure interaction, while the whole process of explosive welding has not been well modeled before. In this paper, a novel smoothed particle hydrodynamics (SPH) model is developed to simulate explosive welding. In the SPH model, a kernel gradient correction algorithm is used to achieve better computational accuracy. A density adapting technique which can effectively treat large density ratio is also proposed. The developed SPH model is firstly validated by simulating a benchmark problem of one-dimensional TNT detonation and an impact welding problem. The SPH model is then successfully applied to simulate the whole process of explosive welding. It is demonstrated that the presented SPH method can capture typical physics in explosive welding including explosion wave, welding surface morphology, jet flow and acceleration of the flyer plate. The welding angle obtained from the SPH simulation agrees well with that from a kinematic analysis.
Debris Flow Hazard Map Simulation using FLO-2D For Selected Areas in the Philippines
NASA Astrophysics Data System (ADS)
Khallil Ferrer, Peter; Llanes, Francesca; dela Resma, Marvee; Realino, Victoriano, II; Obrique, Julius; Ortiz, Iris Jill; Aquino, Dakila; Narod Eco, Rodrigo; Mahar Francisco Lagmay, Alfredo
2014-05-01
On December 4, 2012, Super Typhoon Bopha wreaked havoc in the southern region of Mindanao, leaving 1,067 people dead and causing USD 800 million worth of damage. Classified as a Category 5 typhoon by the Joint Typhoon Warning Center (JTWC), Bopha brought intense rainfall and strong winds that triggered landslides and debris flows, particularly in Barangay (village) Andap, New Bataan municipality, in the southern Philippine province of Compostela Valley. The debris flow destroyed school buildings and covered courts and an evacuation center. Compostela Valley also suffered the most casualties of any province: 612 out of a total of 1,067. In light of the disaster in Compostela, measures were immediately devised to improve available geohazard maps to raise public awareness about landslides and debris flows. A debris flow is a very rapid to extremely rapid flow of saturated non-plastic debris in a steep channel. They are generated when heavy rainfall saturates sediments, causing them to flow down river channels within an alluvial fan situated at the base of the slope of a mountain drainage network. Many rural communities in the Philippines, such as Barangay Andap, are situated at the apex of alluvial fans and in the path of potential debris flows. In this study, we conducted simulations of debris flows to assess the risks in inhabited areas throughout the Philippines and validated the results in the field, focusing on the provinces of Pangasinan and Aurora as primary examples. Watersheds that drain in an alluvial fan using a 10-m resolution Synthetic Aperture Radar (SAR)-derived Digital Elevation Model (DEM) was first delineated, and then a 1 in 100-year rain return rainfall scenario for the watershed was used to simulate debris flows using FLO-2D, a flood-routing software. The resulting simulations were used to generate debris flow hazard maps which are consistent with danger zones in alluvial fans delineated previously from satellite imagery and available DEMs. The
Simulation of Inundation Zone triggered by Dam Failure using FLO-2D
NASA Astrophysics Data System (ADS)
Lee, K.; Kim, S. W.; Kim, J. M.
2014-12-01
Floods due to gradual dam breach can lead to devastating disasters with tremendous loss of life and property. Hence it is important to identify the potential risk areas for natural hazard problem such as dam failure. A numerical modeling approach is often used to build a flood hazard map caused by dam failure. The two primary tasks in the analysis of a dam breach are the prediction of the reservoir outflow hydrograph and the routing of the hydrograph through the downstream valley. The hydrograph to be routed downstream may be prescribed, and parametric models could be used to build a outflow hydrograph once breach parameters capturing breach formation and progress are specified. Even though breach growth is one of the most important parameter in building the reservoir outflow hydrograph, observations are rarely available. In the mean while lake level data is often measured during the dam failure on the real time basis and they may capture the characteristics of breach formation and progress. Thus a simple method is developed to reproduce breach formation. The breach formation is retrieved from lake level data as a function of time during dam failure event. The new method uses an optimization scheme as a primary tool. Because observation for breach formation doesn't exist, it is hard to validate the performance of the new method. Alternatively the retrieved breach formation curve is linked with a parametric dam failure model to give outflow hydrograph. Then FLO-2D is run to route the outflow hydrograph through the downstream valley for the test site. To validate the new method the simulation of FLO-2D is relatively compared with the on-site investigation for the inundation zone. The new method is promising in that it provides reasonable accuracy in the test site. Keywords: Dam failure, Natural hazard, Breach, Hydrograph AcknowledgementThis research was supported by a grant (13SCIPS01) from Smart Civil Infrastructure Research Program funded by Ministry of Land
NASA Astrophysics Data System (ADS)
Lee, T. S.; Nagamine, K.; Hernquist, L.; Springel, V.
2011-02-01
We calculate the cross-correlation function (CCF) between damped Lyα systems (DLAs) and Lyman break galaxies (LBGs) using cosmological hydrodynamic simulations at z= 3. We compute the CCF with two different methods. First, we assume that there is one DLA in each dark matter halo if its DLA cross-section is non-zero. In our second approach we weight the pair count by the DLA cross-section of each halo, yielding a cross-section-weighted CCF. We also compute the angular CCF for direct comparison with observations. Finally, we calculate the autocorrelation functions of LBGs and DLAs, and their bias against the dark matter distribution. For these different approaches, we consistently find that there is good agreement between our simulations and observational measurements by Cooke et al. and Adelberger et al.. Our results thus confirm that the spatial distribution of LBGs and DLAs can be well described within the framework of the concordance Λ cold dark matter model. We find that the correlation strengths of LBGs and DLAs are consistent with the actual observations, and in the case of LBGs it is higher than would be predicted by low-mass galaxy merger models.
Effect of radiative transfer on damped Lyα and Lyman limit systems in cosmological SPH simulations
NASA Astrophysics Data System (ADS)
Yajima, Hidenobu; Choi, Jun-Hwan; Nagamine, Kentaro
2012-12-01
We study the effect of local stellar radiation and ultraviolet background (UVB) radiation on the physical properties of damped Lyα systems (DLAs) and Lyman limit systems (LLSs) at z = 3 using cosmological smoothed particle hydrodynamics simulations. We post-process our simulations with the authentic radiation transfer (ART) code for radiative transfer of local stellar radiation and UVB radiation. We find that the DLA and LLS cross-sections are significantly reduced by the UVB radiation, whereas the local stellar radiation does not affect them very much except in the low-mass haloes. This is because the clumpy high-density clouds near young star clusters effectively absorb most of the ionizing photons from young stars. We also find that the UVB model with a simple density threshold for the self-shielding effect can reproduce the observed column density distribution function of DLAs and LLSs very well, and we validate this model by direct radiative transfer calculations of stellar radiation and UVB radiation with high angular resolution. We show that, with a self-shielding treatment, the DLAs have an extended distribution around star-forming regions typically on ˜10-30 kpc scales, and LLSs are surrounding DLAs on ˜30-60 kpc scales. The DLA gas is less extended than the virial radius of the halo, and LLSs are distributed over the similar scale to the virial radius of the host halo. Our simulations suggest that the median properties of DLA host haloes are Mh = 2.4 × 1010 M⊙, SFR = 0.3 M⊙ yr-1, M★ = 2.4 × 108 M⊙ and Z/Z⊙ = 0.1. About 30 per cent of DLAs are hosted by haloes having SFR = 1-20 M⊙ yr-1, which is the typical star formation rate (SFR) range for Lyman break galaxies (LBGs). More than half of DLAs are hosted by the LBGs that are fainter than the current observational limit. Our results suggest that fractional contribution to LLSs from lower mass haloes is greater than for DLAs. Therefore, the median values of LLS host haloes are somewhat lower
NASA Technical Reports Server (NTRS)
Shie, Chung-Lin; Tao, Wei-Kuo; Simpson, Joanne
2003-01-01
The 1999 Kwajalein Atoll field experiment (KWAJEX), one of several major TRMM (Tropical Rainfall Measuring Mission) field experiments, has successfully obtained a wealth of information and observation data on tropical convective systems over the western Central Pacific region. In this paper, clouds and convective systems that developed during three active periods (Aug 7-12, Aug 17-21, and Aug 29-Sep 13) around Kwajalein Atoll site are simulated using both 2D and 3D Goddard Cumulus Ensemble (GCE) models. Based on numerical results, the clouds and cloud systems are generally unorganized and short lived. These features are validated by radar observations that support the model results. Both the 2D and 3D simulated rainfall amounts and their stratiform contribution as well as the heat, water vapor, and moist static energy budgets are examined for the three convective episodes. Rainfall amounts are quantitatively similar between the two simulations, but the stratiform contribution is considerably larger in the 2D simulation. Regardless of dimension, fo all three cases, the large-scale forcing and net condensation are the two major physical processes that account for the evolution of the budgets with surface latent heat flux and net radiation solar and long-wave radiation)being secondary processes. Quantitative budget differences between 2D and 3D as well as between various episodes will be detailed.Morover, simulated radar signatures and Q1/Q2 fields from the three simulations are compared to each other and with radar and sounding observations.
Numerical modeling of surf zone dynamics under weakly plunging breakers with SPH method
NASA Astrophysics Data System (ADS)
Makris, Christos V.; Memos, Constantine D.; Krestenitis, Yannis N.
2016-02-01
The wave breaking of weak plungers over a relatively mild slope is investigated in this paper. Numerical modeling aspects are studied, concerning the propagation and breaking of shore-normal, nonlinear and regular waves. The two-dimensional (2-D) kinematics and dynamics (fluctuating flow features and large 2-D eddies) of the wave-induced flow on a vertical cross-section over the entire surf zone are simulated with the use of Smoothed Particle Hydrodynamics (SPH). The academic 'open source' code SPHysics v.2 is employed and the viscosity treatment is based on a Sub-Particle Scale (SPS) approach, similarly to the Large Eddy Simulations (LES) concept. Thorough analysis of the turbulent flow scales determines the necessary refinement of the spatial resolution. The initial particle discretization reaches down to the demarcation point between integral turbulence length scales and Taylor micro-scales. A convolution-type integration method is implemented for the transformation of scattered Lagrangian particle data to Eulerian values at fixed gauges. A heuristic technique of ensemble-averaging is used for the discrimination of the fluctuating flow components from coherent structures and ordered wave motion. Comparisons between numerical and experimental data give encouraging results for several wave features. The wave-induced mean flows are simulated plausibly, and even the 'streaming' effect near the bed is reproduced. The recurring vorticity patterns are derived, and coherent 2-D structures inside the surf zone are identified. Fourier spectral analysis of velocities reveals isotropy of 2-D fluctuating dynamics up to rather high frequencies in shear intensified regions. The simulated Reynolds stresses follow patterns that define the characteristic mechanism of wave breaking for weak plungers. Persisting discrepancies at the incipient breaking region confirm the need for fine, massively 'parallel' 3-D SPS-SPH simulations.
Direct numerical simulation of a 2D-stented aortic heart valve at physiological flow rates.
Dimakopoulos, Y; Bogaerds, A C B; Anderson, P D; Hulsen, M A; Baaijens, F P T
2012-01-01
We study the nonlinear interaction of an aortic heart valve, composed of hyperelastic corrugated leaflets of finite density attached to a stented vessel under physiological flow conditions. In our numerical simulations, we use a 2D idealised representation of this arrangement. Blood flow is caused by a time-varying pressure gradient that mimics that of the aortic valve and corresponds to a peak Reynolds number equal to 4050. Here, we fully account for the shear-thinning behaviour of the blood and large deformations and contact between the leaflets by solving the momentum and mass balances for blood and leaflets. The mixed finite element/Galerkin method along with linear discontinuous Lagrange multipliers for coupling the fluid and elastic domains is adopted. Moreover, a series of challenging numerical issues such as the finite length of the computational domain and the conditions that should be imposed on its inflow/outflow boundaries, the accurate time integration of the parabolic and hyperbolic momentum equations, the contact between the leaflets and the non-conforming mesh refinement in part of the domain are successfully resolved. Calculations for the velocity and the shear stress fields of the blood reveal that boundary layers appear on both sides of a leaflet. The one along the ventricular side transfers blood with high momentum from the core region of the vessel to the annulus or the sinusoidal expansion, causing the continuous development of flow instabilities. At peak systole, vortices are convected in the flow direction along the annulus of the vessel, whereas during the closure stage of the valve, an extremely large vortex develops in each half of the flow domain.
Simulation study of the ionic mechanisms underlying Torsade de Pointes in a 2D cardiac tissue.
Kirthi Priya, Ponnuraj; Reddy, M Ramasubba
2017-08-24
To understand the ionic mechanism behind the genesis of Torsade de Pointes (TdP) occurring with long QT syndrome 2 (LQTS2) in a remodelled transmural tissue. The TP06 model is used to simulate the electrical activity of cells in a 2D transmural ventricular model. LQTS2 is realised by reducing the potassium current (IKr) to 0.5 in each cell. Each cell of the tissue is remodelled by increasing the conductance of calcium current (GCaL). The above two factors make the cells prone to early after depolarizations (EADs) development. The rise in GCaL that can develop a sustained TdP at normal pacing rate is determined from this study. A look at the calcium dynamics, sodium-calcium exchanger current (INaCa) and slow delayed rectifier potassium current (IKs) distribution maps of the tissue helps us in analysing the mechanism of TdP generation. A TdP type pattern at normal pacing rate is generated when GCaL is more than 3.5 times the control parameter. From the M-cell island, an adequate number of cells spontaneously release calcium from their sarcoplasmic reticulum leading to increased intracellular calcium and inward sodium current through the sodium calcium exchanger current (INaCa). These contribute to the development of EADs which create a depolarising wavefront that triggers TdP in the tissue. When GCaL is less than 3.5 times the control value, premature ventricular complexes (PVC) occur interspersed between normal beats. Normal pacing rates can induce a multi focal TdP when sufficient number of M-cells simultaneously undergo spontaneous calcium release (SCR) events. Copyright © 2017 Elsevier Ltd. All rights reserved.
NASA Astrophysics Data System (ADS)
Chen, Xihui; Sun, Zhigang; Sun, Jianfen; Song, Yingdong
2017-02-01
In this paper, a numerical model which incorporates the oxidation damage model and the finite element model of 2D plain woven composites is presented for simulation of the oxidation behaviors of 2D plain woven C/SiC composite under preloading oxidation atmosphere. The equal proportional reduction method is firstly proposed to calculate the residual moduli and strength of unidirectional C/SiC composite. The multi-scale method is developed to simulate the residual elastic moduli and strength of 2D plain woven C/SiC composite. The multi-scale method is able to accurately predict the residual elastic modulus and strength of the composite. Besides, the simulated residual elastic moduli and strength of 2D plain woven C/SiC composites under preloading oxidation atmosphere show good agreements with experimental results. Furthermore, the preload, oxidation time, temperature and fiber volume fractions of the composite are investigated to show their influences upon the residual elastic modulus and strength of 2D plain woven C/SiC composites.
NASA Technical Reports Server (NTRS)
Kapoor, Kamlesh; Anderson, Bernhard H.; Shaw, Robert J.
1994-01-01
A two-dimensional computational code, PRLUS2D, which was developed for the reactive propulsive flows of ramjets and scramjets, was validated for two-dimensional shock-wave/turbulent-boundary-layer interactions. The problem of compression corners at supersonic speeds was solved using the RPLUS2D code. To validate the RPLUS2D code for hypersonic speeds, it was applied to a realistic hypersonic inlet geometry. Both the Baldwin-Lomax and the Chien two-equation turbulence models were used. Computational results showed that the RPLUS2D code compared very well with experimentally obtained data for supersonic compression corner flows, except in the case of large separated flows resulting from the interactions between the shock wave and turbulent boundary layer. The computational results compared well with the experiment results in a hypersonic NASA P8 inlet case, with the Chien two-equation turbulence model performing better than the Baldwin-Lomax model.
Simulating the oxygen content of ambient organic aerosol with the 2D volatility basis set
NASA Astrophysics Data System (ADS)
Murphy, B. N.; Donahue, N. M.; Fountoukis, C.; Pandis, S. N.
2011-08-01
A module predicting the oxidation state of organic aerosol (OA) has been developed using the two-dimensional volatility basis set (2D-VBS) framework. This model is an extension of the 1D-VBS framework and tracks saturation concentration and oxygen content of organic species during their atmospheric lifetime. The host model, a one-dimensional Lagrangian transport model, is used to simulate air parcels arriving at Finokalia, Greece during the Finokalia Aerosol Measurement Experiment in May 2008 (FAME-08). Extensive observations were collected during this campaign using an aerosol mass spectrometer (AMS) and a thermodenuder to determine the chemical composition and volatility, respectively, of the ambient OA. Although there are several uncertain model parameters, the consistently high oxygen content of OA measured during FAME-08 (O:C = 0.8) can help constrain these parameters and elucidate OA formation and aging processes that are necessary for achieving the high degree of oxygenation observed. The base-case model reproduces observed OA mass concentrations (measured mean = 3.1 μg m-3, predicted mean = 3.3 μg m-3) and O:C (predicted O:C = 0.78) accurately. A suite of sensitivity studies explore uncertainties due to (1) the anthropogenic secondary OA (SOA) aging rate constant, (2) assumed enthalpies of vaporization, (3) the volatility change and number of oxygen atoms added for each generation of aging, (4) heterogeneous chemistry, (5) the oxidation state of the first generation of compounds formed from SOA precursor oxidation, and (6) biogenic SOA aging. Perturbations in most of these parameters do impact the ability of the model to predict O:C well throughout the simulation period. By comparing measurements of the O:C from FAME-08, several sensitivity cases including a high oxygenation case, a low oxygenation case, and biogenic SOA aging case are found to unreasonably depict OA aging, keeping in mind that this study does not consider possibly important processes
Stability and accuracy of 3D neutron transport simulations using the 2D/1D method in MPACT
Collins, Benjamin; Stimpson, Shane; Kelley, Blake W.; Young, Mitchell T.H.; Kochunas, Brendan; Graham, Aaron; Larsen, Edward W.; Downar, Thomas; Godfrey, Andrew
2016-12-01
A consistent “2D/1D” neutron transport method is derived from the 3D Boltzmann transport equation, to calculate fuel-pin-resolved neutron fluxes for realistic full-core Pressurized Water Reactor (PWR) problems. The 2D/1D method employs the Method of Characteristics to discretize the radial variables and a lower order transport solution to discretize the axial variable. This paper describes the theory of the 2D/1D method and its implementation in the MPACT code, which has become the whole-core deterministic neutron transport solver for the Consortium for Advanced Simulations of Light Water Reactors (CASL) core simulator VERA-CS. Several applications have been performed on both leadership-class and industry-class computing clusters. Results are presented for whole-core solutions of the Watts Bar Nuclear Power Station Unit 1 and compared to both continuous-energy Monte Carlo results and plant data.
Stability and accuracy of 3D neutron transport simulations using the 2D/1D method in MPACT
Collins, Benjamin; Stimpson, Shane; Kelley, Blake W.; Young, Mitchell T. H.; Kochunas, Brendan; Graham, Aaron; Larsen, Edward W.; Downar, Thomas; Godfrey, Andrew
2016-08-25
We derived a consistent “2D/1D” neutron transport method from the 3D Boltzmann transport equation, to calculate fuel-pin-resolved neutron fluxes for realistic full-core Pressurized Water Reactor (PWR) problems. The 2D/1D method employs the Method of Characteristics to discretize the radial variables and a lower order transport solution to discretize the axial variable. Our paper describes the theory of the 2D/1D method and its implementation in the MPACT code, which has become the whole-core deterministic neutron transport solver for the Consortium for Advanced Simulations of Light Water Reactors (CASL) core simulator VERA-CS. We also performed several applications on both leadership-class and industry-class computing clusters. Results are presented for whole-core solutions of the Watts Bar Nuclear Power Station Unit 1 and compared to both continuous-energy Monte Carlo results and plant data.
Stability and accuracy of 3D neutron transport simulations using the 2D/1D method in MPACT
NASA Astrophysics Data System (ADS)
Collins, Benjamin; Stimpson, Shane; Kelley, Blake W.; Young, Mitchell T. H.; Kochunas, Brendan; Graham, Aaron; Larsen, Edward W.; Downar, Thomas; Godfrey, Andrew
2016-12-01
A consistent "2D/1D" neutron transport method is derived from the 3D Boltzmann transport equation, to calculate fuel-pin-resolved neutron fluxes for realistic full-core Pressurized Water Reactor (PWR) problems. The 2D/1D method employs the Method of Characteristics to discretize the radial variables and a lower order transport solution to discretize the axial variable. This paper describes the theory of the 2D/1D method and its implementation in the MPACT code, which has become the whole-core deterministic neutron transport solver for the Consortium for Advanced Simulations of Light Water Reactors (CASL) core simulator VERA-CS. Several applications have been performed on both leadership-class and industry-class computing clusters. Results are presented for whole-core solutions of the Watts Bar Nuclear Power Station Unit 1 and compared to both continuous-energy Monte Carlo results and plant data.
Stability and accuracy of 3D neutron transport simulations using the 2D/1D method in MPACT
Collins, Benjamin; Stimpson, Shane; Kelley, Blake W.; ...
2016-08-25
We derived a consistent “2D/1D” neutron transport method from the 3D Boltzmann transport equation, to calculate fuel-pin-resolved neutron fluxes for realistic full-core Pressurized Water Reactor (PWR) problems. The 2D/1D method employs the Method of Characteristics to discretize the radial variables and a lower order transport solution to discretize the axial variable. Our paper describes the theory of the 2D/1D method and its implementation in the MPACT code, which has become the whole-core deterministic neutron transport solver for the Consortium for Advanced Simulations of Light Water Reactors (CASL) core simulator VERA-CS. We also performed several applications on both leadership-class and industry-classmore » computing clusters. Results are presented for whole-core solutions of the Watts Bar Nuclear Power Station Unit 1 and compared to both continuous-energy Monte Carlo results and plant data.« less
Stability and accuracy of 3D neutron transport simulations using the 2D/1D method in MPACT
Collins, Benjamin; Stimpson, Shane; Kelley, Blake W.; Young, Mitchell T. H.; Kochunas, Brendan; Graham, Aaron; Larsen, Edward W.; Downar, Thomas; Godfrey, Andrew
2016-08-25
We derived a consistent “2D/1D” neutron transport method from the 3D Boltzmann transport equation, to calculate fuel-pin-resolved neutron fluxes for realistic full-core Pressurized Water Reactor (PWR) problems. The 2D/1D method employs the Method of Characteristics to discretize the radial variables and a lower order transport solution to discretize the axial variable. Our paper describes the theory of the 2D/1D method and its implementation in the MPACT code, which has become the whole-core deterministic neutron transport solver for the Consortium for Advanced Simulations of Light Water Reactors (CASL) core simulator VERA-CS. We also performed several applications on both leadership-class and industry-class computing clusters. Results are presented for whole-core solutions of the Watts Bar Nuclear Power Station Unit 1 and compared to both continuous-energy Monte Carlo results and plant data.
SmaggIce 2D Version 1.8: Software Toolkit Developed for Aerodynamic Simulation Over Iced Airfoils
NASA Technical Reports Server (NTRS)
Choo, Yung K.; Vickerman, Mary B.
2005-01-01
SmaggIce 2D version 1.8 is a software toolkit developed at the NASA Glenn Research Center that consists of tools for modeling the geometry of and generating the grids for clean and iced airfoils. Plans call for the completed SmaggIce 2D version 2.0 to streamline the entire aerodynamic simulation process--the characterization and modeling of ice shapes, grid generation, and flow simulation--and to be closely coupled with the public-domain application flow solver, WIND. Grid generated using version 1.8, however, can be used by other flow solvers. SmaggIce 2D will help researchers and engineers study the effects of ice accretion on airfoil performance, which is difficult to do with existing software tools because of complex ice shapes. Using SmaggIce 2D, when fully developed, to simulate flow over an iced airfoil will help to reduce the cost of performing flight and wind-tunnel tests for certifying aircraft in natural and simulated icing conditions.
NASA Astrophysics Data System (ADS)
Wang, X.; Cai, M.
2016-11-01
A nonlinear velocity model that considers the influence of confinement and rock mass failure on wave velocity is developed. A numerical method, which couples FLAC and SPECFEM2D, is developed for ground motion modeling near excavation boundaries in underground mines. The motivation of developing the FLAC/SPECFEM2D coupled approach is to take merits of each code, such as the stress analysis capability in FLAC and the powerful wave propagation analysis capability in SPECFEM2D. Because stress redistribution and failure of the rock mass around an excavation are considered, realistic non-uniform velocity fields for the SPECFEM2D model can be obtained, and this is a notable feature of this study. Very large differences in wavefields and ground motion are observed between the results from the non-uniform and the uniform velocity models. If the non-uniform velocity model is used, the ground motion around a stope can be amplified up to five times larger than that given by the design scaling law. If a uniform velocity model is used, the amplification factor is only about three. Using the FLAC/SPECFEM2D coupled modeling approach, accurate velocity models can be constructed and this in turn will assist in predicting ground motions accurately around underground excavations.
MOD_FreeSurf2D: a Surface Fluid Flow Simulation Model for Rivers, Streams, and Shallow Estuaries
NASA Astrophysics Data System (ADS)
Martin, N.; Gorelick, S. M.
2003-12-01
The MOD_FreeSurf2D, Modular Free Surface Flow in Two-Dimensions, computer model simulates free surface fluid flow in streams, rivers, and shallow estuaries under the assumptions of a well-mixed water column, a small water depth to width ratio, and a hydrostatic pressure distribution. The dependent variables in the model are free surface elevation, which provides total water depth, and fluid velocity. Primary advantages of MOD_FreeSurf2D relative to other two-dimensional models are a stable and computationally efficient numerical representation and a transparent representation of wetting and drying of the simulation domain. MOD_FreeSurf2D approximates the depth-averaged, shallow water equations with a finite volume, semi-implicit, semi-Lagrangian numerical representation similar to the TRIM method (Casulli, 1990; Casulli and Cheng, 1992; Casulli, 1999). The semi-implicit, semi-Lagrangian approach is computationally efficient because time steps can exceed the Courant-Friedrich-Lewy (CFL) stability criterion without significant accuracy degradation (Robert, 1982; Casulli, 1990). The rectangular, Arakawa C-grid, finite-volume layout allows flooding and drying in response to changing flow conditions without prior channel specification or closed boundary specification. Open boundary conditions available in MOD_FreeSurf2D are specified flux, specified total water depth, specified velocity, radiation free surface, and radiation velocity. MOD_FreeSurf2D requires initial topography, undisturbed water depth, and Manning's roughness coefficient. MOD_FreeSurf2D simulated results are shown to converge to the semi-empirical solution for a simple straight channel case. Two applications demonstrate the accuracy of MOD_FreeSurf2D. The first application is the evolution of water depth in the dambreak-style flume experiment of Bellos et al. (1992). In this case, MOD_FreeSurf2D accurately simulates the changing water depth in the flume during the experiment and models the wetting of
Simulation study of 2D spectrum of molecular aggregates coupled to correlated vibrations
NASA Astrophysics Data System (ADS)
Abramavicius, Darius; Butkus, Vytautas; Valkunas, Leonas; Mukamel, Shaul
2011-03-01
Oscillatory dynamics of two-dimensional (2D) spectra of photosynthetic pigment-protein complexes raise the questions of how to disentangle various origins of these oscillations, which may include quantum beats, quantum transport, or molecular vibrations. We study the effects of correlated overdamped fluctuations and under-damped vibrations on the 2D spectra of Fenna-Matthews-Olson (FMO) aggregate, which has well-resolved exciton resonances, and a circular porphyrin aggregate (P6), whose absorption shows vibrational progression. We use a generic exciton Hamiltonian coupled to a bath, characterized by a spectral density. Fluctuations have smooth, while vibtations have δ -type spectral densities. We show how various scenarios of correlated molecular fluctuations lead to some highly oscillatory crosspeaks. Molecular vibrations cause progression of diagonal peaks in the 2D spectrum and make their corresponding cross-peaks highly oscillatory. We, thus, demonstrate that bath fluctuations and molecular vibrations of realistic molecular aggregates are highly entangled in 2D spectroscopy. DA acknowledges grant VP1-3.1-SMM-07-V, SM - the grants CHE0745892 (NSF), DRPA BAA-10-40 QUBE.
Ab-initio quantum transport simulation of self-heating in single-layer 2-D materials
NASA Astrophysics Data System (ADS)
Stieger, Christian; Szabo, Aron; Bunjaku, Teutë; Luisier, Mathieu
2017-07-01
Through advanced quantum mechanical simulations combining electron transport and phonon transport from first-principles, self-heating effects are investigated in n-type transistors with single-layer MoS2, WS2, and black phosphorus as channel materials. The selected 2-D crystals all exhibit different phonon-limited mobility values, as well as electron and phonon properties, which have a direct influence on the increase in their lattice temperature and on the power dissipated inside their channel as a function of the applied gate voltage and electrical current magnitude. This computational study reveals (i) that self-heating plays a much more important role in 2-D materials than in Si nanowires, (ii) that it could severely limit the performance of 2-D devices at high current densities, and (iii) that black phosphorus appears less sensitive to this phenomenon than transition metal dichalcogenides.
NASA Technical Reports Server (NTRS)
Proffitt, M. H.; Solomon, S.; Loewenstein, M.
1992-01-01
A linear reference relationship between O3 and N2O has been used to estimate polar winter O3 loss from aircraft data taken in the lower stratosphere. Here, this relationship is evaluated at high latitudes by comparing it with a 2D model simulation and with NIMBUS 7 satellite measurements. Although comparisons with satellite measurements are limited to January through May, the model simulations are compared during other seasons. The model simulations and the satellite data are found to be consistent with the winter O3 loss analysis. It is shown that such analyses are likely to be inappropriate during other seasons.
2D Numerical simulations of intraoceanic subduction: the case study of the Ligurian Alps.
NASA Astrophysics Data System (ADS)
Malatesta, Cristina; Gerya, Taras; Federico, Laura; Scambelluri, Marco; Crispini, Laura; Capponi, Giovanni
2010-05-01
Intraoceanic subduction is an important part of the present and past subduction systems, and some features of such process are not yet fully understood. We therefore studied intraoceanic subduction zones with the help of 2D numerical models, analyzing the parameters influencing their evolution in time and space. We applied the finite differences method on a rectangular grid, to calculate properties such as pressure, temperatures and velocities inside the models solving a set of equations. The latter comprise the Stokes equation of motion, the continuity equation and the heat transport equation. Temperature and velocities are computed on the nodes of the grid whereas pressures are calculated for the geometrical centers of the cells. We defined material properties such as density or viscosity on marker points, initially positioned on a regular rectangular grid. The markers and therefore the material properties are moved through the mesh according to the velocity field using the forth order Runge-Kutta method (Gerya et al. 2002). Subduction is forced to begin at a weak zone in the lithospheric mantle within an oceanic basin of prescribed width. The effect of different arrangements of rock bodies inside the subducting lithosphere on the evolution of the process was carefully analyzed. In particular we reproduced two distinct structures of the oceanic lithosphere: i) the layered oceanic crust made up of a stratified succession typical of fast-spreading ridges and ii) the oceanic lithosphere typical of slow and ultra-slow spreading centers, where an incomplete sequence is observable. The latter structure lacks a sheeted dike complex, has a low volume of gabbros and basalts and gabbros form discrete intrusions in variably serpentinized peridotites (Lagabrielle et al., 1997; Mével, 2003). Such an "heterogeneous" structure is characteristic of the Alpine and Appennine ophiolites that characterized the Mesozoic Ligurian Tethys located between Europe and Adria. The depth of
Characterizing flow in oil reservoir rock using SPH: absolute permeability
NASA Astrophysics Data System (ADS)
Holmes, David W.; Williams, John R.; Tilke, Peter; Leonardi, Christopher R.
2016-04-01
In this paper, a three-dimensional smooth particle hydrodynamics (SPH) simulator for modeling grain scale fluid flow in porous rock is presented. The versatility of the SPH method has driven its use in increasingly complex areas of flow analysis, including flows related to permeable rock for both groundwater and petroleum reservoir research. While previous approaches to such problems using SPH have involved the use of idealized pore geometries (cylinder/sphere packs etc), in this paper we detail the characterization of flow in models with geometries taken from 3D X-ray microtomographic imaging of actual porous rock; specifically 25.12 % porosity dolomite. This particular rock type has been well characterized experimentally and described in the literature, thus providing a practical `real world' means of verification of SPH that will be key to its acceptance by industry as a viable alternative to traditional reservoir modeling tools. The true advantages of SPH are realized when adding the complexity of multiple fluid phases, however, the accuracy of SPH for single phase flow is, as yet, under developed in the literature and will be the primary focus of this paper. Flow in reservoir rock will typically occur in the range of low Reynolds numbers, making the enforcement of no-slip boundary conditions an important factor in simulation. To this end, we detail the development of a new, robust, and numerically efficient method for implementing no-slip boundary conditions in SPH that can handle the degree of complexity of boundary surfaces, characteristic of an actual permeable rock sample. A study of the effect of particle density is carried out and simulation results for absolute permeability are presented and compared to those from experimentation showing good agreement and validating the method for such applications.
Mach number validation of a new zonal CFD method (ZAP2D) for airfoil simulations
NASA Technical Reports Server (NTRS)
Strash, Daniel J.; Summa, Michael; Yoo, Sungyul
1991-01-01
A closed-loop overlapped velocity coupling procedure has been utilized to combine a two-dimensional potential-flow panel code and a Navier-Stokes code. The fully coupled two-zone code (ZAP2D) has been used to compute the flow past a NACA 0012 airfoil at Mach numbers ranging from 0.3 to 0.84 near the two-dimensional airfoil C(lmax) point for a Reynolds number of 3 million. For these cases, the grid domain size can be reduced to 3 chord lengths with less than 3-percent loss in accuracy for freestream Mach numbers through 0.8. Earlier validation work with ZAP2D has demonstrated a reduction in the required Navier-Stokes computation time by a factor of 4 for subsonic Mach numbers. For this more challenging condition of high lift and Mach number, the saving in CPU time is reduced to a factor of 2.
Mach number validation of a new zonal CFD method (ZAP2D) for airfoil simulations
NASA Technical Reports Server (NTRS)
Strash, Daniel J.; Summa, Michael; Yoo, Sungyul
1991-01-01
A closed-loop overlapped velocity coupling procedure has been utilized to combine a two-dimensional potential-flow panel code and a Navier-Stokes code. The fully coupled two-zone code (ZAP2D) has been used to compute the flow past a NACA 0012 airfoil at Mach numbers ranging from 0.3 to 0.84 near the two-dimensional airfoil C(lmax) point for a Reynolds number of 3 million. For these cases, the grid domain size can be reduced to 3 chord lengths with less than 3-percent loss in accuracy for freestream Mach numbers through 0.8. Earlier validation work with ZAP2D has demonstrated a reduction in the required Navier-Stokes computation time by a factor of 4 for subsonic Mach numbers. For this more challenging condition of high lift and Mach number, the saving in CPU time is reduced to a factor of 2.
Simulation of multi-steps thermal transition in 2D spin-crossover nanoparticles
NASA Astrophysics Data System (ADS)
Jureschi, Catalin-Maricel; Pottier, Benjamin-Louis; Linares, Jorge; Richard Dahoo, Pierre; Alayli, Yasser; Rotaru, Aurelian
2016-04-01
We have used an Ising like model to study the thermal behavior of a 2D spin crossover (SCO) system embedded in a matrix. The interaction parameter between edge SCO molecules and its local environment was included in the standard Ising like model as an additional term. The influence of the system's size and the ratio between the number of edge molecules and the other molecules were also discussed.
EDGE2D Simulations of JET{sup 13}C Migration Experiments
J.D. Strachan; J.P. Coad; G. Corrigan; G.F. Matthews; J. Spence
2004-06-16
Material migration has received renewed interest due to tritium retention associated with carbon transport to remote vessel locations. Those results influence the desirability of carbon usage on ITER. Subsequently, additional experiments have been performed, including tracer experiments attempting to identify material migration from specific locations. In this paper, EDGE2D models a well-diagnosed JET{sup 13}C tracer migration experiment. The role of SOL flows upon the migration patterns is identified.
Rognlien, Thomas D.; McLean, Adam G.; Fenstermacher, Max E.; ...
2017-01-27
A modeling study is reported using new 2D data from DIII-D tokamak divertor plasmas and improved 2D transport model that includes large cross-field drifts for the numerically difficult H-mode regime. The data set, which spans a range of plasmas densities for both forward and reverse toroidal magnetic field (Bt) over a range of plasma densities, is provided by divertor Thomson scattering (DTS). Measurements utilizing X-point sweeping give corresponding 2D profiles of electron temperature (Te) and density (ne) across both divertor legs for individual discharges. The calculations show the same features of in/out plasma asymmetries as measured in the experiment, withmore » the normal Bt direction (ion ∇B drift toward the X-point) having higher ne and lower Te in the inner divertor leg than outer. Corresponding emission data for total radiated power shows a strong inner-divertor/outer-divertor asymmetry that is reproduced by the simulations. Furthermore, these 2D UEDGE transport simulations are enabled for steep-gradient H-mode conditions by newly implemented algorithms to control isolated grid-scale irregularities.« less
Numerical Simulation of Slinger Combustor Using 2-D Axisymmetric Computational Model
NASA Astrophysics Data System (ADS)
Lee, Semin; Park, Soo Hyung; Lee, Donghun
2010-06-01
Small-size turbojet engines have difficulties in maintaining the chemical reaction due to the limitation of chamber size. The combustion chamber is generally designed to improve the reaction efficiency by the generation of vortices in the chamber and to enhance air-fuel mixing characteristics. In the initial stage of designing the combustor, analysis of the 3-D full configuration is not practical due to the huge time consuming computation and grid generation followed by modifications of the geometry. In the present paper, an axisymmetric model maintaining geometric similarity and flow characteristic of 3-D configuration is developed. Based on numerical results from the full 3-D configuration, model reduction is achieved toward 2-D axisymmetric configuration. In the modeling process, the area and location of each hole in 3-D full configuration are considered reasonably and replaced to the 2-D axisymmetric model. By using the 2-D axisymmetric model, the factor that can affect the performance is investigated with the assumption that the flow is non-reacting and turbulent. Numerical results from the present model show a good agreement with numerical results from 3-D full configuration model such as existence of vortex pair in forward region and total pressure loss. By simplifying the complex 3-D model, computing time can be remarkably reduced and it makes easy to find effects of geometry modification.
GodunovSPH with shear viscosity: implementation and tests
NASA Astrophysics Data System (ADS)
Cha, Seung-Hoon; Wood, Matt A.
2016-05-01
The acceleration and energy dissipation terms due to the shear viscosity have been implemented and tested in GodunovSPH. The double summation method has been employed to avoid the well-known numerical noise of the second derivative in particle based codes. The plane Couette flow with various initial and boundary conditions have been used as tests, and the numerical and analytical results show a good agreement. Not only the viscosity-only calculation, but the full hydrodynamics simulations have been performed, and they show expected results as well. The very low kinematic viscosity simulations show a turbulent pattern when the Reynolds number exceeds ˜102. The critical value of the Reynolds number at the transition point of the laminar and turbulent flows coincides with the previous works approximately. A smoothed dynamic viscosity has been suggested to describe the individual kinematic viscosity of particles. The infinitely extended Couette flow which has two layers of different viscosities has been simulated to check the smoothed dynamic viscosity, and the result agrees well with the analytic solution. In order to compare the standard smoothed particle hydrodynamics (SPH) and GodunovSPH, the two layers test has been performed again with a density contrast. GodunovSPH shows less dispersion than the standard SPH, but there is no significant difference in the results. The results of the viscous ring evolution has also been presented as well, and the numerical results agrees with the analytic solution.
Sengupta, Neelanjana; Maekawa, Hiroaki; Zhuang, Wei; Toniolo, Claudio; Mukamel, Shaul; Tobias, Douglas J.; Ge, Nien-Hui
2010-01-01
We have investigated the sensitivity of two-dimensional infrared (2D IR) spectroscopy to peptide helicity with an experimental and theoretical study of Z-[L-(αMe)Val]8-OtBu in CDCl3. 2D IR experiments were carried out in the amide-I region under the parallel and the double-crossed polarization configurations. In the latter polarization configuration, the 2D spectra taken with the rephasing and nonrephasing pulse sequences exhibit a doublet feature and a single peak, respectively. These cross-peak patterns are highly sensitive to the underlying peptide structure. Spectral calculations were performed on the basis of a vibrational exciton model, with the local mode frequencies and couplings calculated from snapshots of molecular dynamics (MD) simulation trajectories using six different models for the Hamiltonian. Conformationally variant segments of the MD trajectory, while reproducing the main features of the experimental spectra, are characterized by extraneous features, suggesting that the structural ensembles sampled by the simulation are too broad. By imposing periodic restraints on the peptide dihedral angles with the crystal structure as a reference, much better agreement between the measured and the calculated spectra was achieved. The result indicates that the structure of Z-[L-(αMe)Val]8-OtBu in CDCl3 is a fully developed 310-helix with only a small fraction of α-helical or nonhelical conformations in the middle of the peptide. Of the four different combinations of pulse sequences and polarization configurations, the nonrephasing double-crossed polarization 2D IR spectrum exhibits the highest sensitivity in detecting conformational variation. Of the six local mode frequency models tested, the electrostatic maps of Mukamel and Cho perform the best. Our results show that the high sensitivity of 2D IR spectroscopy can provide a useful basis for developing methods to improve the sampling accuracy of force fields and for characterizing the relative merits of
Dean, N.S.; Bartley, S.L.; Streib, W.E.
1995-03-15
Synthetic procedures leading to the preparation of V{sup III} and V{sup IV} complexes of PhS{sup {minus}} are described, including the mononuclear complex (NEt{sub 4})[V(SPh){sub 4}(bpy)] (1). Controlled aerial oxidation of its 4,4{prime}-Me{sub 2}-bpy (Me{sub 2}-bpy) analogue generated in situ with 0.5 equiv of O{sub 2} leads to generation of [VO(SPh){sub 3}(Me{sub 2}-bpy)]{sup {minus}} that can be isolated as the NR{sub 4}{sup +} salts; (NMe{sub 4})[VO(SPh){sub 3}(Me{sub 2}-bpy)] (2) has been structurally characterized and contains a distorted-octahedral anion with three equatorial PhS{sup {minus}} groups and one Me{sub 2}-bpy N atom of the chelate trans to the multiply-bonded O atom. The same oxidation reaction with the related ion [V(SPh){sub 2}(bpy){sub 2}]{sup +} leads to [VO(SPh)(bpy){sub 2}](PF{sub 6}) (3). Controlled hydrolysis of [V(SPh){sub 4}(Me{sub 2}-bpy)]{sup {minus}}, generated in situ, leads to isolation of V{sub 2}O(SPh){sub 4}(Me{sub 2}-bpy){sub 2} (4) which has a [V{sub 2}({mu}-O)({mu}-SPh){sub 2}]{sup 2+} core with a terminal PhS{sup {minus}} and chelating Me{sub 2}-bpy on each metal; the V-V separation of 2.579(3) {angstrom} is suggestive of a V{sup III}-V{sup III} single bond. EHT calculations on the model complex V{sub 2}O(SH){sub 4}(NH{sub 3}){sub 4} indicate a V-V {sigma} bond arising from V d{sub z}{sup 2} overlap, with the HOMO and LUMO comprising {delta} and {delta}{sup *} orbitals, respectively, formed by V d{sub xy} orbitals. A small HOMO-LUMO gap ({approx}0.02 eV) suggests the weak room-temperature paramagnetism is due to thermal population of the LUMO. Variable-temperature solid-state studies on 4 indicate an effective magnetic moment per dimer ({mu}{sub eff}/V{sub 2}) of 1.35 {mu}{sub B} at 330 K decreasing to 0.095 {mu}{sub B} at 5.0 K.
Karavitis, G.A.
1984-01-01
The SIMSYS2D two-dimensional water-quality simulation system is a large-scale digital modeling software system used to simulate flow and transport of solutes in freshwater and estuarine environments. Due to the size, processing requirements, and complexity of the system, there is a need to easily move the system and its associated files between computer sites when required. A series of job control language (JCL) procedures was written to allow transferability between IBM and IBM-compatible computers. (USGS)
Lin, Shangchao; Shih, Chih-Jen; Sresht, Vishnu; Govind Rajan, Ananth; Strano, Michael S; Blankschtein, Daniel
2017-06-01
The colloidal dispersion stability of 1D and 2D materials in the liquid phase is critical for scalable nano-manufacturing, chemical modification, composites production, and deployment as conductive inks or nanofluids. Here, we review recent computational and theoretical studies carried out by our group to model the dispersion stability of 1D and 2D materials, including single-walled carbon nanotubes, graphene, and graphene oxide in aqueous surfactant solutions or organic solvents. All-atomistic (AA) molecular dynamics (MD) simulations can probe the molecular level details of the adsorption morphology of surfactants and solvents around these materials, as well as quantify the interaction energy between the nanomaterials mediated by surfactants or solvents. Utilizing concepts from reaction kinetics and diffusion, one can directly predict the rate constants for the aggregation kinetics and dispersion life times using MD outputs. Furthermore, the use of coarse-grained (CG) MD simulations allows quantitative prediction of surfactant adsorption isotherms. Combined with the Poisson-Boltzmann equation, the Langmuir isotherm, and the DLVO theory, one can directly use CGMD outputs to: (i) predict electrostatic potentials around the nanomaterial, (ii) correlate surfactant surface coverages with surfactant concentrations in the bulk dispersion medium, and (iii) determine energy barriers against coagulation. Finally, we discuss challenges associated with studying emerging 2D materials, such as, hexagonal boron nitride (h-BN), phosphorene, and transition metal dichalcogenides (TMDCs), including molybdenum disulfide (MoS2). An outlook is provided to address these challenges with plans to develop force-field parameters for MD simulations to enable predictive modeling of emerging 2D materials in the liquid phase. Copyright © 2016 Elsevier B.V. All rights reserved.
Simulation of Ultra-Small MOSFETs Using a 2-D Quantum-Corrected Drift-Diffusion Model
NASA Technical Reports Server (NTRS)
Biegal, Bryan A.; Rafferty, Connor S.; Yu, Zhiping; Ancona, Mario G.; Dutton, Robert W.; Saini, Subhash (Technical Monitor)
1998-01-01
The continued down-scaling of electronic devices, in particular the commercially dominant MOSFET, will force a fundamental change in the process of new electronics technology development in the next five to ten years. The cost of developing new technology generations is soaring along with the price of new fabrication facilities, even as competitive pressure intensifies to bring this new technology to market faster than ever before. To reduce cost and time to market, device simulation must become a more fundamental, indeed dominant, part of the technology development cycle. In order to produce these benefits, simulation accuracy must improve markedly. At the same time, device physics will become more complex, with the rapid increase in various small-geometry and quantum effects. This work describes both an approach to device simulator development and a physical model which advance the effort to meet the tremendous electronic device simulation challenge described above. The device simulation approach is to specify the physical model at a high level to a general-purpose (but highly efficient) partial differential equation solver (in this case PROPHET, developed by Lucent Technologies), which then simulates the model in 1-D, 2-D, or 3-D for a specified device and test regime. This approach allows for the rapid investigation of a wide range of device models and effects, which is certainly essential for device simulation to catch up with, and then stay ahead of, electronic device technology of the present and future. The physical device model used in this work is the density-gradient (DG) quantum correction to the drift-diffusion model [Ancona, Phys. Rev. B 35(5), 7959 (1987)]. This model adds tunneling and quantum smoothing of carrier density profiles to the drift-diffusion model. We used the DG model in 1-D and 2-D (for the first time) to simulate both bipolar and unipolar devices. Simulations of heavily-doped, short-base diodes indicated that the DG quantum
Simulation of Ultra-Small MOSFETs Using a 2-D Quantum-Corrected Drift-Diffusion Model
NASA Technical Reports Server (NTRS)
Biegal, Bryan A.; Rafferty, Connor S.; Yu, Zhiping; Ancona, Mario G.; Dutton, Robert W.; Saini, Subhash (Technical Monitor)
1998-01-01
The continued down-scaling of electronic devices, in particular the commercially dominant MOSFET, will force a fundamental change in the process of new electronics technology development in the next five to ten years. The cost of developing new technology generations is soaring along with the price of new fabrication facilities, even as competitive pressure intensifies to bring this new technology to market faster than ever before. To reduce cost and time to market, device simulation must become a more fundamental, indeed dominant, part of the technology development cycle. In order to produce these benefits, simulation accuracy must improve markedly. At the same time, device physics will become more complex, with the rapid increase in various small-geometry and quantum effects. This work describes both an approach to device simulator development and a physical model which advance the effort to meet the tremendous electronic device simulation challenge described above. The device simulation approach is to specify the physical model at a high level to a general-purpose (but highly efficient) partial differential equation solver (in this case PROPHET, developed by Lucent Technologies), which then simulates the model in 1-D, 2-D, or 3-D for a specified device and test regime. This approach allows for the rapid investigation of a wide range of device models and effects, which is certainly essential for device simulation to catch up with, and then stay ahead of, electronic device technology of the present and future. The physical device model used in this work is the density-gradient (DG) quantum correction to the drift-diffusion model [Ancona, Phys. Rev. B 35(5), 7959 (1987)]. This model adds tunneling and quantum smoothing of carrier density profiles to the drift-diffusion model. We used the DG model in 1-D and 2-D (for the first time) to simulate both bipolar and unipolar devices. Simulations of heavily-doped, short-base diodes indicated that the DG quantum
HEAT.PRO - THERMAL IMBALANCE FORCE SIMULATION AND ANALYSIS USING PDE2D
NASA Technical Reports Server (NTRS)
Vigue, Y.
1994-01-01
HEAT.PRO calculates the thermal imbalance force resulting from satellite surface heating. The heated body of a satellite re-radiates energy at a rate that is proportional to its temperature, losing the energy in the form of photons. By conservation of momentum, this momentum flux out of the body creates a reaction force against the radiation surface, and the net thermal force can be observed as a small perturbation that affects long term orbital behavior of the satellite. HEAT.PRO calculates this thermal imbalance force and then determines its effects on satellite orbits, especially where the Earth's shadowing of an orbiting satellite causes periodic changes in the spacecraft's thermal environment. HEAT.PRO implements a finite element method routine called PDE2D which incorporates material properties to determine the solar panel surface temperatures. The nodal temperatures are computed at specified time steps and are used to determine the magnitude and direction of the thermal force on the spacecraft. These calculations are based on the solar panel orientation and satellite's position with respect to the earth and sun. It is necessary to have accurate, current knowledge of surface emissivity, thermal conductivity, heat capacity, and material density. These parameters, which may change due to degradation of materials in the environment of space, influence the nodal temperatures that are computed and thus the thermal force calculations. HEAT.PRO was written in FORTRAN 77 for Cray series computers running UNICOS. The source code contains directives for and is used as input to the required partial differential equation solver, PDE2D. HEAT.PRO is available on a 9-track 1600 BPI magnetic tape in UNIX tar format (standard distribution medium) or a .25 inch streaming magnetic tape cartridge in UNIX tar format. An electronic copy of the documentation in Macintosh Microsoft Word format is included on the distribution tape. HEAT.PRO was developed in 1991. Cray and UNICOS are
HEAT.PRO - THERMAL IMBALANCE FORCE SIMULATION AND ANALYSIS USING PDE2D
NASA Technical Reports Server (NTRS)
Vigue, Y.
1994-01-01
HEAT.PRO calculates the thermal imbalance force resulting from satellite surface heating. The heated body of a satellite re-radiates energy at a rate that is proportional to its temperature, losing the energy in the form of photons. By conservation of momentum, this momentum flux out of the body creates a reaction force against the radiation surface, and the net thermal force can be observed as a small perturbation that affects long term orbital behavior of the satellite. HEAT.PRO calculates this thermal imbalance force and then determines its effects on satellite orbits, especially where the Earth's shadowing of an orbiting satellite causes periodic changes in the spacecraft's thermal environment. HEAT.PRO implements a finite element method routine called PDE2D which incorporates material properties to determine the solar panel surface temperatures. The nodal temperatures are computed at specified time steps and are used to determine the magnitude and direction of the thermal force on the spacecraft. These calculations are based on the solar panel orientation and satellite's position with respect to the earth and sun. It is necessary to have accurate, current knowledge of surface emissivity, thermal conductivity, heat capacity, and material density. These parameters, which may change due to degradation of materials in the environment of space, influence the nodal temperatures that are computed and thus the thermal force calculations. HEAT.PRO was written in FORTRAN 77 for Cray series computers running UNICOS. The source code contains directives for and is used as input to the required partial differential equation solver, PDE2D. HEAT.PRO is available on a 9-track 1600 BPI magnetic tape in UNIX tar format (standard distribution medium) or a .25 inch streaming magnetic tape cartridge in UNIX tar format. An electronic copy of the documentation in Macintosh Microsoft Word format is included on the distribution tape. HEAT.PRO was developed in 1991. Cray and UNICOS are
2D Quantum Simulation of MOSFET Using the Non Equilibrium Green's Function Method
NASA Technical Reports Server (NTRS)
Svizhenko, Alexel; Anantram, M. P.; Govindan, T. R.; Yan, Jerry (Technical Monitor)
2000-01-01
The objectives this viewgraph presentation summarizes include: (1) the development of a quantum mechanical simulator for ultra short channel MOSFET simulation, including theory, physical approximations, and computer code; (2) explore physics that is not accessible by semiclassical methods; (3) benchmarking of semiclassical and classical methods; and (4) study other two-dimensional devices and molecular structure, from discretized Hamiltonian to tight-binding Hamiltonian.
Implementation, study and calibration of a modified ASM2d for the simulation of SBR processes.
Marsili Libelli, S; Ratini, P; Spagni, A; Bortone, G
2001-01-01
An enhanced process model for SBRs has been developed. Though the basic mechanism largely draws on the Activated Sludge Model n. 2d, its new features are the splitting of the nitrification stage in a two-step process, according to the well known Nitrosomonas-Nitrobacter oxidation sequence, and an improved XPAO dynamics, involved in the anaerobic/aerobic phosphorus removal process. The model was implemented through the DLL technique allowing complied C++ modules to be linked to an ordinary Simulink block diagram. The static sensitivity study revealed that if the parameter vector is partitioned into subsets of biologically related parameters and calibrated separately, the calibration procedure does not present particularly difficult aspects. Trajectory sensitivity showed also to which extent data collection could be optimised in order to improve calibration accuracy. The study of the shape of the error functional generated by parameters couples allows a much more effective calibration strategy.
NASA Astrophysics Data System (ADS)
Hidrovo, Carlos; Salamat, Yasamin
2016-11-01
Capacitive Deionization (CDI) is a relatively new electrically based desalination method that uses porous media to adsorb ions in solution from water, with the potential to recover part of the energy used during the desalination process. Previous studies have investigated the physics underlying the electro-adsorption process in the electrical double layers in the CDI porous electrodes. In order to improve CDI performance in terms of minimum average concentration, total amount of water treated, and duration of the desalination process, herein we propose and evaluate different CDI architectures. Two previously validated 2D and 1D models are used alongside each other to study different CDI system configurations based on various convective-diffusive layer regimes. Moreover, the effects of micro pore and macro pore capacities on the total number of ions adsorbed in the porous media is investigated. This will open new opportunities for further researches toward engineered CDI units for better desalination.
2D-simulation of stationary MHD flows in the ducts of rectangular cross-section
NASA Astrophysics Data System (ADS)
Khalzov, Ivan; Ilgisonis, Victor
2005-10-01
The numerical code for a calculation of 2D stationary MHD flows of incompressible conducting viscous fluids (liquid metals) in straight and circular ducts of rectangular cross-section is developed. The flows are driven by the electrical current perpendicular both to the duct axis and to the external magnetic field. The code generalizes the well-known iterative Gauss-Seidel method for the case of systems of elliptic equations. The algorithm developed allows us to carry out the calculations of stationary flows in a wide range of Hartmann (Ha=110^3) and Reynolds (Re=110^6) numbers. The numerical results are presented for the experimental device, which is under construction in Russia.
Tracer dispersion simulation in low wind speed conditions with a new 2D Langevin equation system
NASA Astrophysics Data System (ADS)
Anfossi, D.; Alessandrini, S.; Trini Castelli, S.; Ferrero, E.; Oettl, D.; Degrazia, G.
The simulation of atmospheric dispersion in low wind speed conditions (LW) is still recognised as a challenge for modellers. Recently, a new system of two coupled Langevin equations that explicitly accounts for meandering has been proposed. It is based on the study of turbulence and dispersion properties in LW. The new system was implemented in the Lagrangian stochastic particle models LAMBDA and GRAL. In this paper we present simulations with this new approach applying it to the tracer experiments carried out in LW by Idaho National Engineering Laboratory (INEL, USA) in 1974 and by the Graz University of Technology and CNR-Torino near Graz in 2003. To assess the improvement obtained with the present model with respect to previous models not taking into account the meandering effect, the simulations for the INEL experiments were also performed with the old version of LAMBDA. The results of the comparisons clearly indicate that the new approach improves the simulation results.
Optimal time step for incompressible SPH
NASA Astrophysics Data System (ADS)
Violeau, Damien; Leroy, Agnès
2015-05-01
A classical incompressible algorithm for Smoothed Particle Hydrodynamics (ISPH) is analyzed in terms of critical time step for numerical stability. For this purpose, a theoretical linear stability analysis is conducted for unbounded homogeneous flows, leading to an analytical formula for the maximum CFL (Courant-Friedrichs-Lewy) number as a function of the Fourier number. This gives the maximum time step as a function of the fluid viscosity, the flow velocity scale and the SPH discretization size (kernel standard deviation). Importantly, the maximum CFL number at large Reynolds number appears twice smaller than with the traditional Weakly Compressible (WCSPH) approach. As a consequence, the optimal time step for ISPH is only five times larger than with WCSPH. The theory agrees very well with numerical data for two usual kernels in a 2-D periodic flow. On the other hand, numerical experiments in a plane Poiseuille flow show that the theory overestimates the maximum allowed time step for small Reynolds numbers.
Numerical Simulations of High-Frequency Respiratory Flows in 2D and 3D Lung Bifurcation Models
NASA Astrophysics Data System (ADS)
Chen, Zixi; Parameswaran, Shamini; Hu, Yingying; He, Zhaoming; Raj, Rishi; Parameswaran, Siva
2014-07-01
To better understand the human pulmonary system and optimize the high-frequency oscillatory ventilation (HFOV) design, numerical simulations were conducted under normal breathing frequency and HFOV condition using a CFD code Ansys Fluent and its user-defined C programs. 2D and 3D double bifurcating lung models were created, and the geometry corresponds to fifth to seventh generations of airways with the dimensions based on the Weibel's pulmonary model. Computations were carried out for different Reynolds numbers (Re = 400 and 1000) and Womersley numbers (α = 4 and 16) to study the air flow fields, gas transportation, and wall shear stresses in the lung airways. Flow structure was compared with experimental results. Both 2D and 3D numerical models successfully reproduced many results observed in the experiment. The oxygen concentration distribution in the lung model was investigated to analyze the influence of flow oscillation on gas transport inside the lung model.
Radar Reflectivity Simulated by a 2-D Spectra Bin Model: Sensitivity of Cloud-aerosol Interaction
NASA Technical Reports Server (NTRS)
Li, Kiaowen; Tao, Wei-Kuo; Khain, Alexander; Simpson, Joanne; Johnson, Daniel
2003-01-01
The Goddard Cumulus Ensemble (GCE) model with bin spectra microphysics is used to simulate mesoscale convective systems.The model uses explicit bins to represent size spectra of cloud nuclei, water drops, ice crystals, snow and graupel. Each hydrometeorite category is described by 33 mass bins. The simulations provide a unique data set of simulated raindrop size distribution in a realistic dynamic frame. Calculations of radar parameters using simulated drop size distribution serve as an evaluation of numerical model performance. In addition, the GCE bin spectra modes is a very useful tool to study uncertainties related to radar observations; all the environmental parameters are precisely known. In this presentation, we concentrate on the discussion of Z-R (ZDR-R) relation in the simulated systems. Due to computational limitations, the spectra bin model has been run in two dimensions with 31 stretched vertical layers and 1026 horizontal grid points (1 km resolution). Two different cases, one in midlatitude continent, the other in tropical ocean, have been simulated. The continental case is a strong convection which lasted for two hours. The oceanic case is a persistent system with more than 10 hours' life span. It is shown that the simulated Z-R (ZDR-R) relations generally agree with observations using radar and rain gauge data. The spatial and temporal variations of Z-R relation in different locations are also analyzed. Impact of aerosols on cloud formation and raindrop size distribution was studied. Both clean (low CCN) and dirty (high CCN) cases are simulated. The Z-R relation is shown to vary considerable in the initial CCN concentrations.
Lindenschmidt, Karl-Erich; Huang, Shaochun; Baborowski, Martina
2008-07-01
In flood modeling, many one-dimensional (1D) hydrodynamic and water quality models are too restricted in capturing the spatial differentiation of processes within a polder or system of polders and two-dimensional (2D) models are too demanding in data requirements and computational resources, especially if Monte-Carlo techniques are to be used for model uncertainty analyses. The first goal of this paper is to show the successful development of a quasi-2D modeling approach which still calculates the dynamic wave in 1D but the discretisation of the computational units is in 2D, allowing a better spatial representation of the flow and substance transport processes in the polders without a large additional expenditure on data pre-processing and simulation processing. The models DYNHYD (1D hydrodynamics) and TOXI (sediment and micro-pollutant transport) were used as a basis for the hydrodynamic and water quality simulations. An extreme flood event on the Elbe River, Germany, with a proposed polder system variant was used as a test case. The results show a plausible differentiation of suspended sediment and zinc concentrations within the polders both spatially and temporally. This fulfills the second goal of this research. The third goal of this work is to provide an example methodology of carrying out an environmental risk assessment in inundated areas by flood waters, as required by the European Union floods directive. The deposition of zinc in polders was used for this example, due to its high contamination potential in the Elbe River. The extended quasi-2D modeling system incorporates a Monte-Carlo uncertainty analysis to assess the environmental impact of heavy metal deposition in the polders during extreme flooding. The environmental risk computed gives a 48% chance of exceeding the inspection value of 500 mg zinc/kg sediment for a flood such as the August 2002 event.
Simulations of the infrared, Raman, and 2D-IR photon echo spectra of water in nanoscale silica pores
Burris, Paul C.; Laage, Damien; Thompson, Ward H.
2016-05-20
Vibrational spectroscopy is frequently used to characterize nanoconfined liquids and probe the effect of the confining framework on the liquid structure and dynamics relative to the corresponding bulk fluid. However, it is still unclear what molecular-level information can be obtained from such measurements. In this Paper, we address this question by using molecular dynamics (MD) simulations to reproduce the linear infrared (IR), Raman, and two-dimensional IR (2D-IR) photon echo spectra for water confined within hydrophilic (hydroxyl-terminated) silica mesopores. To simplify the spectra the OH stretching region of isotopically dilute HOD in D_{2}O is considered. An empirical mapping approach is used to obtain the OH vibrational frequencies, transition dipoles, and transition polarizabilities from the MD simulations. The simulated linear IR and Raman spectra are in good general agreement with measured spectra of water in mesoporous silica reported in the literature. The key effect of confinement on the water spectrum is a vibrational blueshift for OH groups that are closest to the pore interface. The blueshift can be attributed to the weaker hydrogen bonds (H-bonds) formed between the OH groups and silica oxygen acceptors. Non-Condon effects greatly diminish the contribution of these OH moieties to the linear IR spectrum, but these weaker H-bonds are readily apparent in the Raman spectrum. The 2D-IR spectra have not yet been measured and thus the present results represent a prediction. Lastly, the simulated spectra indicate that it should be possible to probe the slower spectral diffusion of confined water compared to the bulk liquid by analysis of the 2D-IR spectra.
Simulations of the infrared, Raman, and 2D-IR photon echo spectra of water in nanoscale silica pores
Burris, Paul C.; Laage, Damien; Thompson, Ward H.
2016-05-20
Vibrational spectroscopy is frequently used to characterize nanoconfined liquids and probe the effect of the confining framework on the liquid structure and dynamics relative to the corresponding bulk fluid. However, it is still unclear what molecular-level information can be obtained from such measurements. In this Paper, we address this question by using molecular dynamics (MD) simulations to reproduce the linear infrared (IR), Raman, and two-dimensional IR (2D-IR) photon echo spectra for water confined within hydrophilic (hydroxyl-terminated) silica mesopores. To simplify the spectra the OH stretching region of isotopically dilute HOD in D2O is considered. An empirical mapping approach is usedmore » to obtain the OH vibrational frequencies, transition dipoles, and transition polarizabilities from the MD simulations. The simulated linear IR and Raman spectra are in good general agreement with measured spectra of water in mesoporous silica reported in the literature. The key effect of confinement on the water spectrum is a vibrational blueshift for OH groups that are closest to the pore interface. The blueshift can be attributed to the weaker hydrogen bonds (H-bonds) formed between the OH groups and silica oxygen acceptors. Non-Condon effects greatly diminish the contribution of these OH moieties to the linear IR spectrum, but these weaker H-bonds are readily apparent in the Raman spectrum. The 2D-IR spectra have not yet been measured and thus the present results represent a prediction. Lastly, the simulated spectra indicate that it should be possible to probe the slower spectral diffusion of confined water compared to the bulk liquid by analysis of the 2D-IR spectra.« less
Simulations of the infrared, Raman, and 2D-IR photon echo spectra of water in nanoscale silica pores
Burris, Paul C.; Laage, Damien; Thompson, Ward H.
2016-05-20
Vibrational spectroscopy is frequently used to characterize nanoconfined liquids and probe the effect of the confining framework on the liquid structure and dynamics relative to the corresponding bulk fluid. However, it is still unclear what molecular-level information can be obtained from such measurements. In this Paper, we address this question by using molecular dynamics (MD) simulations to reproduce the linear infrared (IR), Raman, and two-dimensional IR (2D-IR) photon echo spectra for water confined within hydrophilic (hydroxyl-terminated) silica mesopores. To simplify the spectra the OH stretching region of isotopically dilute HOD in D_{2}O is considered. An empirical mapping approach is used to obtain the OH vibrational frequencies, transition dipoles, and transition polarizabilities from the MD simulations. The simulated linear IR and Raman spectra are in good general agreement with measured spectra of water in mesoporous silica reported in the literature. The key effect of confinement on the water spectrum is a vibrational blueshift for OH groups that are closest to the pore interface. The blueshift can be attributed to the weaker hydrogen bonds (H-bonds) formed between the OH groups and silica oxygen acceptors. Non-Condon effects greatly diminish the contribution of these OH moieties to the linear IR spectrum, but these weaker H-bonds are readily apparent in the Raman spectrum. The 2D-IR spectra have not yet been measured and thus the present results represent a prediction. Lastly, the simulated spectra indicate that it should be possible to probe the slower spectral diffusion of confined water compared to the bulk liquid by analysis of the 2D-IR spectra.
Burris, Paul C; Laage, Damien; Thompson, Ward H
2016-05-21
Vibrational spectroscopy is frequently used to characterize nanoconfined liquids and probe the effect of the confining framework on the liquid structure and dynamics relative to the corresponding bulk fluid. However, it is still unclear what molecular-level information can be obtained from such measurements. In this paper, we address this question by using molecular dynamics (MD) simulations to reproduce the linear infrared (IR), Raman, and two-dimensional IR (2D-IR) photon echo spectra for water confined within hydrophilic (hydroxyl-terminated) silica mesopores. To simplify the spectra the OH stretching region of isotopically dilute HOD in D2O is considered. An empirical mapping approach is used to obtain the OH vibrational frequencies, transition dipoles, and transition polarizabilities from the MD simulations. The simulated linear IR and Raman spectra are in good general agreement with measured spectra of water in mesoporous silica reported in the literature. The key effect of confinement on the water spectrum is a vibrational blueshift for OH groups that are closest to the pore interface. The blueshift can be attributed to the weaker hydrogen bonds (H-bonds) formed between the OH groups and silica oxygen acceptors. Non-Condon effects greatly diminish the contribution of these OH moieties to the linear IR spectrum, but these weaker H-bonds are readily apparent in the Raman spectrum. The 2D-IR spectra have not yet been measured and thus the present results represent a prediction. The simulated spectra indicates that it should be possible to probe the slower spectral diffusion of confined water compared to the bulk liquid by analysis of the 2D-IR spectra.
Fourier based methodology for simulating 2D-random shapes in heterogeneous materials
NASA Astrophysics Data System (ADS)
Mattrand, C.; Béakou, A.; Charlet, K.
2015-08-01
Gaining insights into the effects of microstructural details on materials behavior may be achieved by incorporating their attributes into numerical modeling. This requires us to make considerable efforts to feature heterogeneity morphology distributions and their spatial arrangement. This paper focuses on modeling the scatter observed in materials heterogeneity geometry. The proposed strategy is based on the development of a 1D-shape signature function representing the 2D-section of a given shape, on Fourier basis functions. The Fourier coefficients are then considered as random variables. This methodology has been applied to flax fibers which are gradually introduced into composite materials as a potential alternative to synthetic reinforcements. In this contribution, the influence of some underlying assumptions regarding the choice of one 1D-shape signature function, its discretization scheme and truncation level, and the best way of modeling the associated random variables is also investigated. Some configurations coming from the combination of these tuning parameters are found to be sufficiently relevant to render efficiently the morphometric factors of the observed fibers statistically speaking.
Prediction of settlement by using finite element simulation 2D program at Seksyen 7, Shah Alam
NASA Astrophysics Data System (ADS)
Razak, Zakiah; Mukri, Mazidah; Kasim, Nur Aisyah
2017-08-01
Construction on soft ground often involves a number of geotechnical issues especially that related to settlements. Excessive post-construction settlements may they be total or differential have always caused serious problem to all parties in the project. Insufficient knowledge on existing ground conditions due to lacking of a proper site investigation coupled with inadequacy in design especially in the foundation for supporting structure could be the likely reasons for causing this problem and lead to eventual instability of the structure above. In general, a reasonably accurate assessment on the rate of settlement of soil is a very important factor in ensuring the achievement of structurally sound building and/or infrastructural work on soft ground without the development of excessive post-construction settlement. In the current investigation, sensitivity analysis to enhance prediction of settlement is carried out using the PLAXIS Finite Element 2D Program by setting the relevant control parameters. This would allow post-construction settlement be predicted during the pre-construction stage be predicted. It is believed that this is useful in assisting the design engineer in arriving at a satisfactory solution subsequently.
2D Simulations of KSTAR edge plasma using SOLPS 4.3 code
NASA Astrophysics Data System (ADS)
Shim, Seung Bo; Kotov, Vladislav; Reiter, Detelev; Han, Hyunsun; Kim, Jin Yong; Na, Yong-Su; Lee, Hae June
2012-10-01
Control of plasma density and impurity content is crucial to achieve high performance long pulse operation in tokamaks. In this paper edge plasma scenarios of KSTAR are analyzed numerically. ITER version of the well-known SOLPS code package (SOLPS4.3) which comprises 2D multi-species fluid plasma code B2 and 3D Monte-Carlo particle solver EIRENE coupled self-consistently. This latter allows full kinetic neutral particle transport modeling in realistic geometries including pump ducts and leaks to the main vessel from the sub-divertor volumes. Both connected and disconnected double null configurations are investigated. The main focus is made on studying the sensitivity of the edge plasma parameters with respect to gas puffing rate (density scans), thus, effectiveness of this latter for the plasma control. Preliminary findings show that for the reference KSTAR pumps: total pumping speed 100 m^3/s, pumping rates up to 13 Pa.m^3/s, and high performance discharges with heating power 8 MW plasma in both divertors is likely to stay attached. At the same time, plasma temperature at the divertor targets as well as the peak incident heat flux density can be effectively reduced with increased gas puff, been especially sensitive in the inner divertors.
Analysis of a 2D simulation model of biofilms with autonomous cells
NASA Astrophysics Data System (ADS)
Bhandar, Anand; Tatek, Yergou; Slater, Gary
2006-03-01
Biofilms are substances consisting of a large number of microorganisms that grow on surfaces in contact with liquids. They can be found growing in water pipes, on surgical instruments or on tooth surfaces. Mathematical models have been used for the last three decades in order to improve our understanding of their growth and behavior. We have designed and implemented a new Monte Carlo model based on the life of autonomous cells and investigated the static and dynamic characteristics of the resulting bacterial populations. Each cell is modeled as an autonomous agent whose behavior is controlled by thermodynamic parameters, mechanical properties, physiological rules and environmental conditions. In the 2D version studied, a cell is represented by a closed chain of self-avoiding beads linked together using the bond fluctuation algorithm. The cell is controlled both by the rigidity of its membrane and a pressure difference. The model is complemented by key features such as the processes of cell division, growth and death, attractive interactions between the cell and the surface, and the explicit presence of nutrient diffusion. Tuning model parameters leads to the growth and maturation of various types of biofilms. Typical colonies incorporating these and other important characteristics of biofilms such as the exopolymeric substance (EPS), metabolism and waste production, cell motility and chemotaxy, and cell mutation will be presented.
Investigating the outcomes of SPH models of catastrophic destruction
NASA Astrophysics Data System (ADS)
Dell'Oro, A.; Cellino, A.; Paolicchi, P.; Tanga, P.
Smooth particle hydro-dynamics (SPH) codes have proved able to simulate satisfactorily the shattering processes in high-energy collisions among asteroids, reproducing the major observational evidences. In particular, SPH models reproduce fairly well the size distributions of the members of some asteroid families. A considerable difference between SPH models and Semi-Empirical Models (SEM) is that in the former the asteroids are ground up into very small fragments, the size of which is limited by the resolution of the code. Moreover, the subsequent ballistic dynamical evolution, driven by their mutual gravitational attraction, would result in a significant re-accumulation into many bodies. On the contrary, ejection velocity fields predicted by SEM allow the reaccumulation into very few bodies, sometimes only the largest remnant. This difference is a critical issue for the interpretation of the observational data in order to understand the physics of the catastrophic destruction process, and the physical characteristics of the asteroids themselves. We present a new analysis of some SPH velocity fields aiming to shed light on the intrinsic differences between SPH models and SEMs.
NASA Astrophysics Data System (ADS)
Michelson, Sara; Bao, Jian-Wen; Grell, Evelyn
2016-04-01
In this study, numerical model simulations of an idealized 2-D squall line are investigated using microphysics budget analysis. Four commonly-used microphysics schemes of various complexity are used in the simulations. Diagnoses of the source and sink terms of the hydrometeor budget equations reveal that the differences related to the assumptions of hydrometeor size-distributions between the schemes lead to the differences in the simulations due to the net effect of various microphysical processes on the interaction between latent heating/evaporative cooling and flow dynamics as the squall line develops. Results from this study also highlight the possibility that the advantage of double-moment formulations can be overshadowed by the uncertainties in the spectral definition of individual hydrometeor categories and spectrum-dependent microphysical processes.
The 2-D simulations of the NRL (Naval Research Laboratory) laser experiment
NASA Astrophysics Data System (ADS)
Lyon, J. G.
1985-05-01
Two-dimensional gas-dynamic simulations of the NRL laser experiment have been performed to study the formation of aneurysms in the blast wave and to study the formation of structure internal to the blast front itself. In one set of simulations the debris shell was perturbed sinusoidally in mass and position and also perturbed to mimic the action of a slow jet of material leaving the target at slower speeds than the bulk of the debris. In all cases the blast wave remained stable to any aneurysm-like instability. Internal structure, however, was quite easily produced and grew as a function of time. In the other set of simulations the effect of a pre-heated channel upon the propagation of the blast wave was examined. Bulges in the blast wave shock front were produced in these simulations that could be the beginning of the aneurysm phenomenon, but the preheated channel by itself appears to be insufficient to produce the observed aneurysm.
3D simulation of detector parameters for backside illuminated InSb 2D arrays
NASA Astrophysics Data System (ADS)
Fishman, Tal; Nahum, Vered; Saguy, Erez; Calahorra, Zippora; Shtrichman, Itay
2007-09-01
Accurate and reliable numerical simulation tools are necessary for the development of advanced semiconductor devices. SCD is using the Silvaco Atlas simulation tool to simultaneously solve the Poisson, Continuity and transport equations for 3D detector structures. In this work we describe a set of systematic experiments performed in order to calibrate the Atlas simulation to SCD's backside illuminated InSb focal plane arrays (FPA) realized with planar technology. From these experiments we extract physical parameters such as diffusion length, surface recombination velocity, and SRH lifetime. The actual and predicted performance (e.g. dark-current and MTF) of present and future detectors is presented. We have studied arrays with pitch in the range of 15 to 30 μm. We find that the MTF width is inversely proportional to the pitch. Thus, the spatial resolution of the detector improves with decreasing pixel size as expected. Using the Atlas simulation we predict the performance of planar InSb arrays with smaller pixel dimensions, e.g., 12 and 10 μm.
NASA Astrophysics Data System (ADS)
Sellmeier, B.; Thuro, K.
2012-04-01
In between the last years rock falls seem to occur more often in high mountainous regions. Linked with the climate change problem, this topic is mentioned in the media more and more frequently. As a consequence, especially in populated alpine regions in Europe, public authorities have to act more and more towards prevention of rock fall events. Important questions in that context are how events can be predicted more precisely in the future and how mitigation methods can be improved in endangered areas. On that purpose, a research project has been established giving an input in different ways by means of a project site which is situated along the federal road B 305 between Unterjettenberg and Schwarzbachwacht near Berchtesgaden in the Bavarian Alps, Germany. In that context the uncertainties concerning field work in difficult terrain are considered with regard to the subsequent simulations. It is often the case that not every part of the rock fall site can be examined in the same way. A further origin of uncertainty is the variation of the initial parameters in between a certain period of time. For example the variation of forest stands parameters because of windbreakage or avalanches. Consequently the factors of uncertainty and their possible consequences for the simulations will be analyzed. As further aspects of the project it is intended to compare the possibilities and limitations of 2D and 3D rock fall simulations concerning the runout zones. In particular the application ranges of both methods will be analyzed using the 2 dimensional simulation codes Rockfall (Dr. Spang) and Rofmod 2D (Geotest) in comparison with the 3 dimensional simulation code Rofmod 3D (Geotest). In this contribution the results of the field work, the analyses of the uncertainties concerning the initial parameters of rockfall simulations will be presented. (SELLMEIER & THURO 2011)
Simulations of chemotaxis and random motility in 2D random porous domains.
Jabbarzadeh, Ehsan; Abrams, Cameron F
2007-02-01
We discuss a generic computational model of eukariotic chemotaxis in 2D random porous domains. The model couples the fully time-dependent finite-difference solution of a reaction-diffusion equation for the concentration field of a chemoattractant to biased random walks representing individual chemotactic cells. We focus in particular on the influence of consumption of chemoattractant by the boundaries of obstacles with irregular shapes which are distributed randomly in the domain on the chemotactic response of the cells. Cells are stimulated to traverse a field of obstacles by a line source of chemoattractant. We find that the reactivity of the obstacle boundaries with respect to the chemoattractant strongly determines the transit time of cells through two primary mechanisms. The channeling effect arises because cells are effectively repelled from surfaces which consume chemoattractant, and opposing surfaces therefore act to keep cells in the middle of channels. This reduces traversal times relative to the case with unreactive boundaries, provided that the appropriate Péclet number relating the strength of reactivity to diffusion in governing chemoattractant transport is neither too low nor too high. The dead-zone effect arises due to a realistic threshold on the chemotactic response, which at steady state results in portions of the domain having no detectable gradient. Of these two, the channeling effect is responsible for 90% of the sensitivity of transit times to boundary reactivity. Based on these results, we speculate that it may be possible to tune the rates of cellular penetration into porous domains by engineering the reactivity of the internal surfaces to cytokines.
NASA Astrophysics Data System (ADS)
Darvini, G.; Salandin, P.
2009-12-01
To analyze the impact of the hydraulic conductivity K spatial variability in a real field case (as an example to delimitate a well catchment), numerical simulations can be reasonably developed in a two-dimensional vertical average context. Nevertheless the plume evolution is a consequence of a more complex three-dimensional heterogeneous structure whose vertical variability dominates the dispersion phenomena at local scale. In larger domains, the effect of the vertical heterogeneity combines itself with that one due to the horizontal variability of K, and only when the plume has travelled a large number of (horizontal) integral scales, its evolution can be analyzed in a regional context, under the hypothesis that the transmissivity spatial distribution prevails. Until this limit is reached, the vertical and horizontal variability of K are combined to give a fully 3-D dispersion process. In all these situations, to successfully accomplish the 3-D heterogeneous structure of the aquifer in 2-D simulations, more than the planimetric depth-averaged variability of K must be accounted for. To define the uncertainty related to the use of different planimetric schematizations of the real hydraulic conductivity spatial distribution, we present here the results of some numerical experiments that compare the 3-D plume evolution with 2-D simulations developed by tacking into account different hydraulic conductivity distribution schematization, by considering a hierarchical architecture of media also. This description of a sedimentary formation combined with the finite size of the plume requires theoretical and numerical tools able to take into account the flow field inhomogeneity and the ergodicity lack that characterize the transport phenomena. Following this way it will be possible to quantify / reduce the uncertainty related to a 2-D schematization in a large number of real cases where the domain spans between the local and the regional scale and whose dimension may lead to
NASA Astrophysics Data System (ADS)
Krause, M.; Camenzind, M.
2001-12-01
In the present paper, we examine the convergence behavior and inter-code reliability of astrophysical jet simulations in axial symmetry. We consider both pure hydrodynamic jets and jets with a dynamically significant magnetic field. The setups were chosen to match the setups of two other publications, and recomputed with the MHD code NIRVANA. We show that NIRVANA and the two other codes give comparable, but not identical results. We explain the differences by the different application of artificial viscosity in the three codes and numerical details, which can be summarized in a resolution effect, in the case without magnetic field: NIRVANA turns out to be a fair code of medium efficiency. It needs approximately twice the resolution as the code by Lind (Lind et al. 1989) and half the resolution as the code by Kössl (Kössl & Müller 1988). We find that some global properties of a hydrodynamical jet simulation, like e.g. the bow shock velocity, converge at 100 points per beam radius (ppb) with NIRVANA. The situation is quite different after switching on the toroidal magnetic field: in this case, global properties converge even at 10 ppb. In both cases, details of the inner jet structure and especially the terminal shock region are still insufficiently resolved, even at our highest resolution of 70 ppb in the magnetized case and 400 ppb for the pure hydrodynamic jet. The magnetized jet even suffers from a fatal retreat of the Mach disk towards the inflow boundary, which indicates that this simulation does not converge, in the end. This is also in definite disagreement with earlier simulations, and challenges further studies of the problem with other codes. In the case of our highest resolution simulation, we can report two new features: first, small scale Kelvin-Helmholtz instabilities are excited at the contact discontinuity next to the jet head. This slows down the development of the long wavelength Kelvin-Helmholtz instability and its turbulent cascade to smaller
NASA Astrophysics Data System (ADS)
Smirnov, E. M.; Smirnovsky, A. A.; Schur, N. A.; Zaitsev, D. K.; Smirnov, P. E.
2016-09-01
The contribution covers results of numerical study of air flow and heat transfer past a backward-facing step at the Reynolds number of 28,000. The numerical simulation was carried out under conditions of the experiments of Vogel&Eaton (1985), where nominally 2D fluid dynamics and heat transfer in a channel with expansion ratio of 1.25 was investigated. Two approaches were used for turbulence modelling. First, the Menter SST turbulence model was used to perform refined 2D and 3D RANS steady-state computations. The 3D analysis was undertaken to evaluate effects of boundary layers developing on the sidewalls of the experimental channel. Then, 3D time-dependent computations were carried out using the vortex-resolving IDDES method and applying the spanwise-periodicity conditions. Comparative computations were performed using an in-house finite-volume code SINF/Flag-S and the ANSYS Fluent. The codes produced practically identical RANS solutions, showing in particular a difference of 4% in the central-line peak Stanton number calculated in 2D and 3D cases. The IDDES results obtained with two codes are in a satisfactory agreement. Comparing with the experimental data, the IDDES produces the best agreement for the wall friction, whereas the RANS solutions show superiority in predictions of the local Stanton number distribution.
NASA Astrophysics Data System (ADS)
Fourtakas, G.; Rogers, B. D.
2016-06-01
A two-phase numerical model using Smoothed Particle Hydrodynamics (SPH) is applied to two-phase liquid-sediments flows. The absence of a mesh in SPH is ideal for interfacial and highly non-linear flows with changing fragmentation of the interface, mixing and resuspension. The rheology of sediment induced under rapid flows undergoes several states which are only partially described by previous research in SPH. This paper attempts to bridge the gap between the geotechnics, non-Newtonian and Newtonian flows by proposing a model that combines the yielding, shear and suspension layer which are needed to predict accurately the global erosion phenomena, from a hydrodynamics prospective. The numerical SPH scheme is based on the explicit treatment of both phases using Newtonian and the non-Newtonian Bingham-type Herschel-Bulkley-Papanastasiou constitutive model. This is supplemented by the Drucker-Prager yield criterion to predict the onset of yielding of the sediment surface and a concentration suspension model. The multi-phase model has been compared with experimental and 2-D reference numerical models for scour following a dry-bed dam break yielding satisfactory results and improvements over well-known SPH multi-phase models. With 3-D simulations requiring a large number of particles, the code is accelerated with a graphics processing unit (GPU) in the open-source DualSPHysics code. The implementation and optimisation of the code achieved a speed up of x58 over an optimised single thread serial code. A 3-D dam break over a non-cohesive erodible bed simulation with over 4 million particles yields close agreement with experimental scour and water surface profiles.
Continuum modeling of rate-dependent granular flows in SPH
NASA Astrophysics Data System (ADS)
Hurley, Ryan C.; Andrade, José E.
2017-01-01
We discuss a constitutive law for modeling rate-dependent granular flows that has been implemented in smoothed particle hydrodynamics (SPH). We model granular materials using a viscoplastic constitutive law that produces a Drucker-Prager-like yield condition in the limit of vanishing flow. A friction law for non-steady flows, incorporating rate-dependence and dilation, is derived and implemented within the constitutive law. We compare our SPH simulations with experimental data, demonstrating that they can capture both steady and non-steady dynamic flow behavior, notably including transient column collapse profiles. This technique may therefore be attractive for modeling the time-dependent evolution of natural and industrial flows.
Mixed-RKDG Finite Element Methods for the 2-D Hydrodynamic Model for Semiconductor Device Simulation
Chen, Zhangxin; Cockburn, Bernardo; Jerome, Joseph W.; ...
1995-01-01
In this paper we introduce a new method for numerically solving the equations of the hydrodynamic model for semiconductor devices in two space dimensions. The method combines a standard mixed finite element method, used to obtain directly an approximation to the electric field, with the so-called Runge-Kutta Discontinuous Galerkin (RKDG) method, originally devised for numerically solving multi-dimensional hyperbolic systems of conservation laws, which is applied here to the convective part of the equations. Numerical simulations showing the performance of the new method are displayed, and the results compared with those obtained by using Essentially Nonoscillatory (ENO) finite difference schemes. Frommore » the perspective of device modeling, these methods are robust, since they are capable of encompassing broad parameter ranges, including those for which shock formation is possible. The simulations presented here are for Gallium Arsenide at room temperature, but we have tested them much more generally with considerable success.« less
A mathematical model for a didactic device able to simulate a 2D Newtonian gravitational field
NASA Astrophysics Data System (ADS)
De Marchi, Fabrizio
2015-01-01
In this paper we propose a mathematical model to describe a theoretical device able to simulate an inverse-square force on a test mass moving on a horizontal plane. We use two pulleys, a counterweight, a wire and a smooth rail, in addition to the test mass. The tension of the wire (i.e. the attractive force on the test mass) is determined by the position of a counterweight free to move on a rail placed under the plane. The profile of the rail is calculated in order to obtain the required Newtonian force. Details of this calculation are reported in the paper, and numerical simulations are provided in order to investigate the stability of the orbits under the effect of the main friction forces and other perturbative effects. This work points out that there are some criticalities intrinsic to the apparatus and gives some suggestions about how to minimize their impact.
NASA Astrophysics Data System (ADS)
Zhao, J. W.; Ding, G. H.; Yin, W. Y.; Yang, X. J.; Shi, W. C.; Zhang, X. L.
The objective of this study is to investigate the effect of hemodynamic parameters on the formation, growth and rupture of an aneurysm. Our simulation of the elastic and rigid aneurysm is based on a DSA or other clinic image. The simulatied results are that there are great differences in the distribution of velocity magnitude at some sections which are predicted by the two models. For the elastic wall model, the distribution of velocity magnitude of one outlet is obviously off-center, which influences the distribution of wall shear stress (WSS) and exchange of substance through the vessel wall. The currents of the distributions of WSS along the wall of aneurysm for the two models are similar. But there are obvious differences between the two models in the values especially at the neck of aneurysm. This study demonstrates obviously that the elastic wall model suits the simulation for growth and rupture of an aneurysm better.
Generalized source method in curvilinear coordinates for 2D grating diffraction simulation
NASA Astrophysics Data System (ADS)
Shcherbakov, Alexey A.; Tishchenko, Alexandre V.
2017-01-01
The article presents a curvilinear coordinate Fourier space integral method for linear optical rigorous grating diffraction simulation in 3D (crossed grating diffraction). The presented formulation extends our previous work on a related method for 1D periodic grating diffraction. Following this previous work we exploit a concept of the generalized metric sources to efficiently solve the Maxwell's equations. The article provides a general description of the method together with a detailed formulation and analysis of sinusoidal corrugation crossed grating diffraction.
Zhou, Y. L.; Wang, Z. H.; Xu, X. Q.; ...
2015-01-09
Plasma fueling with high efficiency and deep injection is very important to enable fusion power performance requirements. It is a powerful and efficient way to study neutral transport dynamics and find methods of improving the fueling performance by doing large scale simulations. Furthermore, two basic fueling methods, gas puffing (GP) and supersonic molecular beam injection (SMBI), are simulated and compared in realistic divertor geometry of the HL-2A tokamak with a newly developed module, named trans-neut, within the framework of BOUT++ boundary plasma turbulence code [Z. H. Wang et al., Nucl. Fusion 54, 043019 (2014)]. The physical model includes plasma density,more » heat and momentum transport equations along with neutral density, and momentum transport equations. In transport dynamics and profile evolutions of both plasma and neutrals are simulated and compared between GP and SMBI in both poloidal and radial directions, which are quite different from one and the other. It finds that the neutrals can penetrate about four centimeters inside the last closed (magnetic) flux surface during SMBI, while they are all deposited outside of the LCF during GP. Moreover, it is the radial convection and larger inflowing flux which lead to the deeper penetration depth of SMBI and higher fueling efficiency compared to GP.« less
Development of a 2-D large-scale micellar/polymer simulator
Wang, B.
1982-01-01
A large-scale, two-dimensional, multicomponent, multiphase, compositional simulator for micellar/polymer flooding has been developed and applied. It can be used to calculate the areal sweep with any well pattern and any irregular reservoir boundary. This model involves both streamline and finite-difference techniques. Time invariant streamlines without transverse dispersion are assumed. The change in the flow rates into each streamline is accounted for as a function of mobility ratio. The sensitivity of the oil recovery for micellar/polymer flood to several reservoir and process variables was investigated. The reservoir variables included the well spacing, pattern type, pattern orientation in an anisotropic reservoir, and degree of confinement. The process variables included the salinity gradient, surfactant content of the slug, slug and polymer bank sizes, mobility ratio of polymer drive to oil bank, and polymer shear thinning effect. In order to demonstrate that this model is capable of handling large field problems, a large-scale simulation of the north lease of the El Dorado micellar/polymer pilot test was made. The simulated final oil recovery and the production histories of each producer are illustrated.
2--D Resistive MHD Simulations of Merging Co-- and Counter--Helicity Spheromaks
NASA Astrophysics Data System (ADS)
Carter, T. A.; Jardin, S. C.
1997-11-01
Studies of the global equilibrium properties of merging spheromaks as well as of the local properties of the reconnection boundary layer in the MHD limit will be presented. The Princeton Tokamak Simulation Code (TSC)(S.C. Jardin, et. al., J. Comp. Phys. 66) (1986) 481, a free--boundary, axisymmetric resistive MHD code, is modified to resolve the two spatial scales of the merging spheromak problem, the equilibrium scale and the boundary layer, and to include convective terms in the coded set of scalar momentum equations. The simulations reported here are performed with parameters T ~ 15 eV, ne ~ 10^14 cm-3, Bz ~ 2 kG. We present comparisons of our simulation results with results from recent analytic(R. Kulsrud, D. Uzdensky, personal communication) and experimental work(M. Yamada, et. al., Phys. Rev. Lett. 78) (1997) 3117 and Y. Ono, et. al., Phys. Rev. Lett. 76 (1996) 3328. In particular we emphasize merging rates for co-- and counter--helicity merging, boundary layer geometry, scaling of merging rate with dimensionless parameters, and formation of spheromak and Field Reversed Configuration (FRC) plasmas as a result of co-- and counter--helicity merging.
Zhou, Y. L.; Wang, Z. H.; Xu, X. Q.; Li, H. D.; Feng, H.; Sun, W. G.
2015-01-15
Plasma fueling with high efficiency and deep injection is very important to enable fusion power performance requirements. It is a powerful and efficient way to study neutral transport dynamics and find methods of improving the fueling performance by doing large scale simulations. Two basic fueling methods, gas puffing (GP) and supersonic molecular beam injection (SMBI), are simulated and compared in realistic divertor geometry of the HL-2A tokamak with a newly developed module, named trans-neut, within the framework of BOUT++ boundary plasma turbulence code [Z. H. Wang et al., Nucl. Fusion 54, 043019 (2014)]. The physical model includes plasma density, heat and momentum transport equations along with neutral density, and momentum transport equations. Transport dynamics and profile evolutions of both plasma and neutrals are simulated and compared between GP and SMBI in both poloidal and radial directions, which are quite different from one and the other. It finds that the neutrals can penetrate about four centimeters inside the last closed (magnetic) flux surface during SMBI, while they are all deposited outside of the LCF during GP. It is the radial convection and larger inflowing flux which lead to the deeper penetration depth of SMBI and higher fueling efficiency compared to GP.
Zhou, Y. L.; Wang, Z. H.; Xu, X. Q.; Li, H. D.; Feng, H.; Sun, W. G.
2015-01-09
Plasma fueling with high efficiency and deep injection is very important to enable fusion power performance requirements. It is a powerful and efficient way to study neutral transport dynamics and find methods of improving the fueling performance by doing large scale simulations. Furthermore, two basic fueling methods, gas puffing (GP) and supersonic molecular beam injection (SMBI), are simulated and compared in realistic divertor geometry of the HL-2A tokamak with a newly developed module, named trans-neut, within the framework of BOUT++ boundary plasma turbulence code [Z. H. Wang et al., Nucl. Fusion 54, 043019 (2014)]. The physical model includes plasma density, heat and momentum transport equations along with neutral density, and momentum transport equations. In transport dynamics and profile evolutions of both plasma and neutrals are simulated and compared between GP and SMBI in both poloidal and radial directions, which are quite different from one and the other. It finds that the neutrals can penetrate about four centimeters inside the last closed (magnetic) flux surface during SMBI, while they are all deposited outside of the LCF during GP. Moreover, it is the radial convection and larger inflowing flux which lead to the deeper penetration depth of SMBI and higher fueling efficiency compared to GP.
Isotopic fractionation of gases during its migration: experiments and 2D numerical simulation
NASA Astrophysics Data System (ADS)
Kara, S.; Prinzhofer, A.
2003-04-01
Several works have been developed in the last decade on the experimental isotope fractionation of gases during migration (Prinzhofer et al., 1997 and Zhang &Krooss, 2001 among others). We add to these results new experiments on diffusion of CO_2, which becomes currently a crucial subject for environmental purpose. Our experiments showed that transport by diffusion of CO_2 through a water saturated shale induces a significant and systematic carbon isotopic fractionation with heavier (13C enriched) CO_2 migrating first. In all experiments, significant isotope fractionation was found but still remains without quantitative interpretation. To interpret these data, we developed a 2D numerical model at the pore scale. The general principle of this model is the study of transport by water solubilization/diffusion of gas in a capillary saturated with water with two different media : a mobile zone representing free water and a immobile zone representing bounded water. The model takes also into account solubilization coefficients of gas in water, as well as the migration distance and the volume of upstream and downstream reservoirs. Using our numerical model, we could reproduce the evolution of isotopic fractionations and the velocity of CO_2 migration versus the production factor F (proportion of diffused gas). We determined some physical parameters of the porous medium (bentonite) which are not directly measurable at the present time. Furthermore, we used these parameters to reproduce the curves of isotopic fractionation obtained by Pernaton (1998) on methane migration with the same porous rock. We used also a modified version of this model with infinite reservoirs to reproduce the curves of isotopic fractionation of Zhang &Krooss (2001). Application of this model to geological scale is under progress, in order to implement it into sedimentary basins modelling. REFERENCES: Zhang T. and Krooss M. (2001). Geochim. Cosmochim. Acta, Vol. 65, No.16, pp. 2723-2742. Pernaton E
A GPU Simulation Tool for Training and Optimisation in 2D Digital X-Ray Imaging.
Gallio, Elena; Rampado, Osvaldo; Gianaria, Elena; Bianchi, Silvio Diego; Ropolo, Roberto
2015-01-01
Conventional radiology is performed by means of digital detectors, with various types of technology and different performance in terms of efficiency and image quality. Following the arrival of a new digital detector in a radiology department, all the staff involved should adapt the procedure parameters to the properties of the detector, in order to achieve an optimal result in terms of correct diagnostic information and minimum radiation risks for the patient. The aim of this study was to develop and validate a software capable of simulating a digital X-ray imaging system, using graphics processing unit computing. All radiological image components were implemented in this application: an X-ray tube with primary beam, a virtual patient, noise, scatter radiation, a grid and a digital detector. Three different digital detectors (two digital radiography and a computed radiography systems) were implemented. In order to validate the software, we carried out a quantitative comparison of geometrical and anthropomorphic phantom simulated images with those acquired. In terms of average pixel values, the maximum differences were below 15%, while the noise values were in agreement with a maximum difference of 20%. The relative trends of contrast to noise ratio versus beam energy and intensity were well simulated. Total calculation times were below 3 seconds for clinical images with pixel size of actual dimensions less than 0.2 mm. The application proved to be efficient and realistic. Short calculation times and the accuracy of the results obtained make this software a useful tool for training operators and dose optimisation studies.
A GPU Simulation Tool for Training and Optimisation in 2D Digital X-Ray Imaging
Gallio, Elena; Rampado, Osvaldo; Gianaria, Elena; Bianchi, Silvio Diego; Ropolo, Roberto
2015-01-01
Conventional radiology is performed by means of digital detectors, with various types of technology and different performance in terms of efficiency and image quality. Following the arrival of a new digital detector in a radiology department, all the staff involved should adapt the procedure parameters to the properties of the detector, in order to achieve an optimal result in terms of correct diagnostic information and minimum radiation risks for the patient. The aim of this study was to develop and validate a software capable of simulating a digital X-ray imaging system, using graphics processing unit computing. All radiological image components were implemented in this application: an X-ray tube with primary beam, a virtual patient, noise, scatter radiation, a grid and a digital detector. Three different digital detectors (two digital radiography and a computed radiography systems) were implemented. In order to validate the software, we carried out a quantitative comparison of geometrical and anthropomorphic phantom simulated images with those acquired. In terms of average pixel values, the maximum differences were below 15%, while the noise values were in agreement with a maximum difference of 20%. The relative trends of contrast to noise ratio versus beam energy and intensity were well simulated. Total calculation times were below 3 seconds for clinical images with pixel size of actual dimensions less than 0.2 mm. The application proved to be efficient and realistic. Short calculation times and the accuracy of the results obtained make this software a useful tool for training operators and dose optimisation studies. PMID:26545097
2D fluid simulations of discharges at atmospheric pressure in reactive gas mixtures
NASA Astrophysics Data System (ADS)
Bourdon, Anne
2015-09-01
Since a few years, low-temperature atmospheric pressure discharges have received a considerable interest as they efficiently produce many reactive chemical species at a low energy cost. This potential is of great interest for a wide range of applications as plasma assisted combustion or biomedical applications. Then, in current simulations of atmospheric pressure discharges, there is the need to take into account detailed kinetic schemes. It is interesting to note that in some conditions, the kinetics of the discharge may play a role on the discharge dynamics itself. To illustrate this, we consider the case of the propagation of He-N2 discharges in long capillary tubes, studied for the development of medical devices for endoscopic applications. Simulation results put forward that the discharge dynamics and structure depend on the amount of N2 in the He-N2 mixture. In particular, as the amount of N2 admixture increases, the discharge propagation velocity in the tube increases, reaches a maximum for about 0 . 1 % of N2 and then decreases, in agreement with experiments. For applications as plasma assisted combustion with nanosecond repetitively pulsed discharges, there is the need to handle the very different timescales of the nanosecond discharge with the much longer (micro to millisecond) timescales of combustion processes. This is challenging from a computational point of view. It is also important to better understand the coupling of the plasma induced chemistry and the gas heating. To illustrate this, we present the simulation of the flame ignition in lean mixtures by a nanosecond pulsed discharge between two point electrodes. In particular, among the different discharge regimes of nanosecond repetitively pulsed discharges, a ``spark'' regime has been put forward in the experiments, with an ultra-fast local heating of the gas. For other discharge regimes, the gas heating is much weaker. We have simulated the nanosecond spark regime and have observed shock waves
Dunbar, Josef A; Arthur, Evan J; White, Aaron M; Kubarych, Kevin J
2015-05-21
Using a derivative of the vitamin biotin labeled with a transition-metal carbonyl vibrational probe in a series of aqueous N,N-dimethylformamide (DMF) solutions, we observe a striking slowdown in spectral diffusion dynamics with decreased DMF concentration. Equilibrium solvation dynamics, measured with the rapidly acquired spectral diffusion (RASD) technique, a variant of heterodyne-detected photon-echo peak shift experiments, range from 1 ps in neat DMF to ∼3 ps in 0.07 mole fraction DMF/water solution. Molecular dynamics simulations of the biotin-metal carbonyl solute in explicit aqueous DMF solutions show marked preferential solvation by DMF, which becomes more pronounced at lower DMF concentrations. The simulations and the experimental data are consistent with an interpretation where the slowdown in spectral diffusion is due to solvent exchange involving distinct cosolvent species. A simple two-component model reproduces the observed spectral dynamics as well as the DMF concentration dependence, enabling the extraction of the solvent exchange time scale of 8 ps. This time scale corresponds to the diffusive motion of a few Å, consistent with a solvent-exchange mechanism. Unlike most previous studies of solvation dynamics in binary mixtures of polar solvents, our work highlights the ability of vibrational probes to sense solvent exchange as a new, slow component in the spectral diffusion dynamics.
Evans, T.E.; Leonard, A.W.; West, W.P.; Finkenthal, D.F.; Fenstermacher, M.E.; Porter, G.D.
1998-08-01
Experimentally measured carbon line emissions and total radiated power distributions from the DIII-D divertor and Scrape-Off Layer (SOL) are compared to those calculated with the Monte Carlo Impurity (MCI) model. A UEDGE background plasma is used in MCI with the Roth and Garcia-Rosales (RG-R) chemical sputtering model and/or one of six physical sputtering models. While results from these simulations do not reproduce all of the features seen in the experimentally measured radiation patterns, the total radiated power calculated in MCI is in relatively good agreement with that measured by the DIII-D bolometric system when the Smith78 physical sputtering model is coupled to RG-R chemical sputtering in an unaltered UEDGE plasma. Alternatively, MCI simulations done with UEDGE background ion temperatures along the divertor target plates adjusted to better match those measured in the experiment resulted in three physical sputtering models which when coupled to the RG-R model gave a total radiated power that was within 10% of measured value.
Simulation of 2D Kinetic Effects in Plasmas using the Grid Based Continuum Code LOKI
NASA Astrophysics Data System (ADS)
Banks, Jeffrey; Berger, Richard; Chapman, Tom; Brunner, Stephan
2016-10-01
Kinetic simulation of multi-dimensional plasma waves through direct discretization of the Vlasov equation is a useful tool to study many physical interactions and is particularly attractive for situations where minimal fluctuation levels are desired, for instance, when measuring growth rates of plasma wave instabilities. However, direct discretization of phase space can be computationally expensive, and as a result there are few examples of published results using Vlasov codes in more than a single configuration space dimension. In an effort to fill this gap we have developed the Eulerian-based kinetic code LOKI that evolves the Vlasov-Poisson system in 2+2-dimensional phase space. The code is designed to reduce the cost of phase-space computation by using fully 4th order accurate conservative finite differencing, while retaining excellent parallel scalability that efficiently uses large scale computing resources. In this poster I will discuss the algorithms used in the code as well as some aspects of their parallel implementation using MPI. I will also overview simulation results of basic plasma wave instabilities relevant to laser plasma interaction, which have been obtained using the code.
Real-time 2D floating-point fast Fourier transforms for seeker simulation
NASA Astrophysics Data System (ADS)
Chamberlain, Richard; Lord, Eric; Shand, David J.
2002-07-01
The floating point Fast Fourier Transform (FFT) is one of the most useful basic functions available to the image and signal processing engineer allowing many complex and detailed special functions to be implemented more simply in the frequency domain. In the Hardware-in-the-Loop field an image transformed using FFT would allow the designer to think about accurate frequency based simulation of seeker lens effects, motion blur, detector transfer functions and much more. Unfortunately, the transform requires many hundreds of thousands or millions of floating point operations on a single modest sized image making it impractical for realtime Hardware-in-the-Loop systems. .until now. This paper outlines the development, by Nallatech, of an FPGA based IEEE floating point core. It traces the subsequent use of this core to develop a full 256 X 256 FFT and filter process implemented on COTS hardware at frame rates up to 150Hz. This transform can be demonstrated to model optical transfer functions at a far greater accuracy than the current spatial models. Other applications and extensions of this technique will be discussed such as filtering for image tracking algorithms and in the simulation of radar processing in the frequency domain.
NASA Astrophysics Data System (ADS)
Ishizuka, Tatsumi; Sumino, Kazuki; Iriye, Yasuroh; Hirose, Masataka
1991-02-01
A two-dimensional device simulator VENUS-2D/B for amorphous silicon thin-film transistors has been developed. For the efficient numerical simulation of amorphous silicon devices, the trapped electron density in the band gap is modeled by the combination of exponential functions. The current-voltage characteristics of an inverted-gate hydrogenerated amorphous silicon thin-film transistor were simulated by VENUS-2D/B.
NASA Astrophysics Data System (ADS)
Pérez-Corona, M.; García, J. A.; Taller, G.; Polgár, D.; Bustos, E.; Plank, Z.
2016-02-01
The purpose of geophysical electrical surveys is to determine the subsurface resistivity distribution by making measurements on the ground surface. From these measurements, the true resistivity of the subsurface can be estimated. The ground resistivity is related to various geological parameters, such as the mineral and fluid content, porosity and degree of water saturation in the rock. Electrical resistivity surveys have been used for many decades in hydrogeological, mining and geotechnical investigations. More recently, they have been used for environmental surveys. To obtain a more accurate subsurface model than is possible with a simple 1-D model, a more complex model must be used. In a 2-D model, the resistivity values are allowed to vary in one horizontal direction (usually referred to as the x direction) but are assumed to be constant in the other horizontal (the y) direction. A more realistic model would be a fully 3-D model where the resistivity values are allowed to change in all three directions. In this research, a simulation of the cone penetration test and 2D imaging resistivity are used as tools to simulate the distribution of hydrocarbons in soil.
Simulating HFIR Core Thermal Hydraulics Using 3D-2D Model Coupling
Travis, Adam R; Freels, James D; Ekici, Kivanc
2013-01-01
A model utilizing interdimensional variable coupling is presented for simulating the thermal hydraulic interactions of the High Flux Isotope Reactor (HFIR) core at Oak Ridge National Laboratory (ORNL). The model s domain consists of a single, explicitly represented three-dimensional fuel plate and a simplified two-dimensional coolant channel slice. In simplifying the coolant channel, and thus the number of mesh points in which the Navier-Stokes equations must be solved, the computational cost and solution time are both greatly reduced. In order for the reduced-dimension coolant channel to interact with the explicitly represented fuel plate, however, interdimensional variable coupling must be enacted along all shared boundaries. The primary focus of this paper is in detailing the collection, storage, passage, and application of variables across this interdimensional interface. Comparisons are made showing the general speed-up associated with this simplified coupled model.
Simulation of a pulsatile non-Newtonian flow past a stenosed 2D artery with atherosclerosis.
Tian, Fang-Bao; Zhu, Luoding; Fok, Pak-Wing; Lu, Xi-Yun
2013-09-01
Atherosclerotic plaque can cause severe stenosis in the artery lumen. Blood flow through a substantially narrowed artery may have different flow characteristics and produce different forces acting on the plaque surface and artery wall. The disturbed flow and force fields in the lumen may have serious implications on vascular endothelial cells, smooth muscle cells, and circulating blood cells. In this work a simplified model is used to simulate a pulsatile non-Newtonian blood flow past a stenosed artery caused by atherosclerotic plaques of different severity. The focus is on a systematic parameter study of the effects of plaque size/geometry, flow Reynolds number, shear-rate dependent viscosity and flow pulsatility on the fluid wall shear stress and its gradient, fluid wall normal stress, and flow shear rate. The computational results obtained from this idealized model may shed light on the flow and force characteristics of more realistic blood flow through an atherosclerotic vessel. Copyright © 2013. Published by Elsevier Ltd.
A hierarchical lattice spring model to simulate the mechanics of 2-D materials-based composites
NASA Astrophysics Data System (ADS)
Brely, Lucas; Bosia, Federico; Pugno, Nicola
2015-07-01
In the field of engineering materials, strength and toughness are typically two mutually exclusive properties. Structural biological materials such as bone, tendon or dentin have resolved this conflict and show unprecedented damage tolerance, toughness and strength levels. The common feature of these materials is their hierarchical heterogeneous structure, which contributes to increased energy dissipation before failure occurring at different scale levels. These structural properties are the key to exceptional bioinspired material mechanical properties, in particular for nanocomposites. Here, we develop a numerical model in order to simulate the mechanisms involved in damage progression and energy dissipation at different size scales in nano- and macro-composites, which depend both on the heterogeneity of the material and on the type of hierarchical structure. Both these aspects have been incorporated into a 2-dimensional model based on a Lattice Spring Model, accounting for geometrical nonlinearities and including statistically-based fracture phenomena. The model has been validated by comparing numerical results to continuum and fracture mechanics results as well as finite elements simulations, and then employed to study how structural aspects impact on hierarchical composite material properties. Results obtained with the numerical code highlight the dependence of stress distributions on matrix properties and reinforcement dispersion, geometry and properties, and how failure of sacrificial elements is directly involved in the damage tolerance of the material. Thanks to the rapidly developing field of nanocomposite manufacture, it is already possible to artificially create materials with multi-scale hierarchical reinforcements. The developed code could be a valuable support in the design and optimization of these advanced materials, drawing inspiration and going beyond biological materials with exceptional mechanical properties.
Gomez, Juan F.; Cardona, Karen; Martinez, Laura; Saiz, Javier; Trenor, Beatriz
2014-01-01
Background Heart failure is operationally defined as the inability of the heart to maintain blood flow to meet the needs of the body and it is the final common pathway of various cardiac pathologies. Electrophysiological remodeling, intercellular uncoupling and a pro-fibrotic response have been identified as major arrhythmogenic factors in heart failure. Objective In this study we investigate vulnerability to reentry under heart failure conditions by incorporating established electrophysiological and anatomical remodeling using computer simulations. Methods The electrical activity of human transmural ventricular tissue (5 cm×5 cm) was simulated using the human ventricular action potential model Grandi et al. under control and heart failure conditions. The MacCannell et al. model was used to model fibroblast electrical activity, and their electrotonic interactions with myocytes. Selected degrees of diffuse fibrosis and variations in intercellular coupling were considered and the vulnerable window (VW) for reentry was evaluated following cross-field stimulation. Results No reentry was observed in normal conditions or in the presence of HF ionic remodeling. However, defined amount of fibrosis and/or cellular uncoupling were sufficient to elicit reentrant activity. Under conditions where reentry was generated, HF electrophysiological remodeling did not alter the width of the VW. However, intermediate fibrosis and cellular uncoupling significantly widened the VW. In addition, biphasic behavior was observed, as very high fibrotic content or very low tissue conductivity hampered the development of reentry. Detailed phase analysis of reentry dynamics revealed an increase of phase singularities with progressive fibrotic components. Conclusion Structural remodeling is a key factor in the genesis of vulnerability to reentry. A range of intermediate levels of fibrosis and intercellular uncoupling can combine to favor reentrant activity. PMID:25054335
NASA Astrophysics Data System (ADS)
Miura, Hideaki; Zheng, Linjin; Horton, Wendell
2017-09-01
Numerical simulations of interchange/tearing instabilities in a 2D slab with a numerical model for edge plasma resistivity are carried out. Plasma outside the Last Closed Flux Surface (LCFS), or the scrape-off layer (SOL), can be characterized by open magnetic fields which terminate on the divertor plates in the outside. A numerical model with current diffusivity is developed to enforce a low-level saturated current profile in the SOL region as well as a current jump across the LCFS. The numerical simulations show that interchange modes can transform into tearing modes, as the current-interchange tearing modes which has been proposed by Zheng and Furukawa [Phys. Plasmas 17, 052508 (2010)]. An applicability of the model to the tokamak edge stability and ELM studies is discussed.
NASA Astrophysics Data System (ADS)
Shustikova, Iuliia; Domeneghetti, Alessio; Neal, Jeffrey; Bates, Paul; Castellarin, Attilio
2017-04-01
Hydrodynamic modeling of inundation events still brings a large array of uncertainties. This effect is especially evident in the models run for geographically large areas. Recent studies suggest using fully two-dimensional (2D) models with high resolution in order to avoid uncertainties and limitations coming from the incorrect interpretation of flood dynamics and an unrealistic reproduction of the terrain topography. This, however, affects the computational efficiency increasing the running time and hardware demands. Concerning this point, our study evaluates and compares numerical models of different complexity by testing them on a flood event that occurred in the basin of the Secchia River, Northern Italy, on 19th January, 2014. The event was characterized by a levee breach and consequent flooding of over 75 km2 of the plain behind the dike within 48 hours causing population displacement, one death and economic losses in excess of 400 million Euro. We test the well-established TELEMAC 2D, and LISFLOOD-FP codes, together with the recently launched HEC-RAS 5.0.3 (2D model), all models are implemented using different grid size (2-200 m) based on the 1 m digital elevation model resolution. TELEMAC is a fully 2D hydrodynamic model which is based on the finite-element or finite-volume approach. Whereas HEC-RAS 5.0.3 and LISFLOOD-FP are both coupled 1D-2D models. All models are calibrated against observed inundation extent and maximum water depths, which are retrieved from remotely sensed data and field survey reports. Our study quantitatively compares the three modeling strategies highlighting differences in terms of the ease of implementation, accuracy of representation of hydraulic processes within floodplains and computational efficiency. Additionally, we look into the different grid resolutions in terms of the results accuracy and computation time. Our study is a preliminary assessment that focuses on smaller areas in order to identify potential modeling schemes
Tropical Oceanic Precipitation Processes Over Warm Pool: 2D and 3D Cloud Resolving Model Simulations
NASA Technical Reports Server (NTRS)
Tao, W.-K.; Johnson, D.; Simpson, J.; Einaudi, Franco (Technical Monitor)
2001-01-01
Rainfall is a key link in the hydrologic cycle as well as the primary heat source for the atmosphere. The vertical distribution of convective latent-heat release modulates the large-scale circulations of the topics. Furthermore, changes in the moisture distribution at middle and upper levels of the troposphere can affect cloud distributions and cloud liquid water and ice contents. How the incoming solar and outgoing longwave radiation respond to these changes in clouds is a major factor in assessing climate change. Present large-scale weather and climate model simulate processes only crudely, reducing confidence in their predictions on both global and regional scales. One of the most promising methods to test physical parameterizations used in General Circulation Models (GCMs) and climate models is to use field observations together with Cloud Resolving Models (CRMs). The CRMs use more sophisticated and physically realistic parameterizations of cloud microphysical processes, and allow for their complex interactions with solar and infrared radiative transfer processes. The CRMs can reasonably well resolve the evolution, structure, and life cycles of individual clouds and clouds systems. The major objective of this paper is to investigate the latent heating, moisture and momentum budgets associated with several convective systems developed during the TOGA COARE IFA - westerly wind burst event (late December, 1992). The tool for this study is the Goddard Cumulus Ensemble (GCE) model which includes a 3-class ice-phase microphysics scheme.
Study of liquid water by computer simulations. I. Static properties of a 2D model
NASA Astrophysics Data System (ADS)
Okazaki, Keiji; Nosé, Shuichi; Kataoka, Yosuke; Yamamoto, Tsunenobu
1981-12-01
A computer-simulation study of a water-like system is carried out by making use of a two-dimensional version of the Ben-Naim and Stillinger potential. The pair potential is set up such that at 0 K it yields a square net structure at low pressures and an interpretation of two square nets at high pressures. The liquid state is surveyed over a wide range of temperature and pressure. Various kinds of molecular distribution functions are derived to see how the hydrogen-bond network structure depends on temperature and density. The pressure and thermal equations of state are ''experimentally'' determined by a least square fitting to the pressures and energies calculated for about 200 different state points. The well-known anomalous behavior of liquid water is reproduced at least in a semiquantitative way. The singular properties of supercooled water also are reproduced and their origin is ascribed to the thermodynamical instability. New anomalies are predicted at high temperatures and pressures.
Tropical Oceanic Precipitation Processes Over Warm Pool: 2D and 3D Cloud Resolving Model Simulations
NASA Technical Reports Server (NTRS)
Tao, W.-K.; Johnson, D.; Simpson, J.; Einaudi, Franco (Technical Monitor)
2001-01-01
Rainfall is a key link in the hydrologic cycle as well as the primary heat source for the atmosphere. The vertical distribution of convective latent-heat release modulates the large-scale circulations of the topics. Furthermore, changes in the moisture distribution at middle and upper levels of the troposphere can affect cloud distributions and cloud liquid water and ice contents. How the incoming solar and outgoing longwave radiation respond to these changes in clouds is a major factor in assessing climate change. Present large-scale weather and climate model simulate processes only crudely, reducing confidence in their predictions on both global and regional scales. One of the most promising methods to test physical parameterizations used in General Circulation Models (GCMs) and climate models is to use field observations together with Cloud Resolving Models (CRMs). The CRMs use more sophisticated and physically realistic parameterizations of cloud microphysical processes, and allow for their complex interactions with solar and infrared radiative transfer processes. The CRMs can reasonably well resolve the evolution, structure, and life cycles of individual clouds and clouds systems. The major objective of this paper is to investigate the latent heating, moisture and momentum budgets associated with several convective systems developed during the TOGA COARE IFA - westerly wind burst event (late December, 1992). The tool for this study is the Goddard Cumulus Ensemble (GCE) model which includes a 3-class ice-phase microphysics scheme.
A Parallel 2D Numerical Simulation of Tumor Cells Necrosis by Local Hyperthermia
NASA Astrophysics Data System (ADS)
Reis, R. F.; Loureiro, F. S.; Lobosco, M.
2014-03-01
Hyperthermia has been widely used in cancer treatment to destroy tumors. The main idea of the hyperthermia is to heat a specific region like a tumor so that above a threshold temperature the tumor cells are destroyed. This can be accomplished by many heat supply techniques and the use of magnetic nanoparticles that generate heat when an alternating magnetic field is applied has emerged as a promise technique. In the present paper, the Pennes bioheat transfer equation is adopted to model the thermal tumor ablation in the context of magnetic nanoparticles. Numerical simulations are carried out considering different injection sites for the nanoparticles in an attempt to achieve better hyperthermia conditions. Explicit finite difference method is employed to solve the equations. However, a large amount of computation is required for this purpose. Therefore, this work also presents an initial attempt to improve performance using OpenMP, a parallel programming API. Experimental results were quite encouraging: speedups around 35 were obtained on a 64-core machine.
NASA Technical Reports Server (NTRS)
Zimmerman, Michael I.; Farrell, W. M.; Snubbs, T. J.; Halekas, J. S.
2011-01-01
Anticipating the plasma and electrical environments in permanently shadowed regions (PSRs) of the moon is critical in understanding local processes of space weathering, surface charging, surface chemistry, volatile production and trapping, exo-ion sputtering, and charged dust transport. In the present study, we have employed the open-source XOOPIC code [I] to investigate the effects of solar wind conditions and plasma-surface interactions on the electrical environment in PSRs through fully two-dimensional pattic1e-in-cell simulations. By direct analogy with current understanding of the global lunar wake (e.g., references) deep, near-terminator, shadowed craters are expected to produce plasma "mini-wakes" just leeward of the crater wall. The present results (e.g., Figure I) are in agreement with previous claims that hot electrons rush into the crater void ahead of the heavier ions, fanning a negative cloud of charge. Charge separation along the initial plasma-vacuum interface gives rise to an ambipolar electric field that subsequently accelerates ions into the void. However, the situation is complicated by the presence of the dynamic lunar surface, which develops an electric potential in response to local plasma currents (e.g., Figure Ia). In some regimes, wake structure is clearly affected by the presence of the charged crater floor as it seeks to achieve current balance (i.e. zero net current to the surface).
Origin of energetic ions observed in the terrestrial ion foreshock : 2D full-particle simulations
NASA Astrophysics Data System (ADS)
Savoini, Philippe; Lembege, bertrand
2016-04-01
Collisionless shocks are well-known structures in astrophysical environments which dissipate bulk flow kinetic energy and accelerate large fraction of particle. Spacecrafts have firmly established the existence of the so-called terrestrial foreshock region magnetically connected to the shock and filled by two distinct populations in the quasi-perpendicular shock region (i.e. for 45r{ } ≤ quad θ Bn quad ≤ 90r{ }, where θ Bn is the angle between the shock normal and the upstream magnetic field) : (i) the field-aligned ion beams or `` FAB '' characterized by a gyrotropic distributionsout{,} and (ii) the gyro-phase bunched ions or `` GPB '' characterized by a NON gyrotropic distribution. The present work is based on the use of two dimensional PIC simulation of a curved shock and associated foreshock region where full curvature effects, time of flight effects and both electrons and ions dynamics are fully described by a self consistent approach. Our previous analysis (Savoini et Lembège, 2015) has evidenced that these two types of backstreaming populations can originate from the shock front itself without invoking any local diffusion by ion beam instabilities. Present results are focussed on individual ion trajectories and evidence that "FAB" population is injected into the foreshock mainly along the shock front whereas the "GPB" population penetrates more deeply the shock front. Such differences explain why the "FAB" population loses their gyro-phase coherency and become gyrotropic which is not the case for the "GPB". The impact of these different injection features on the energy gain for each ion population will be presented in détails. Savoini, P. and B. Lembège (2015), `` Production of nongyrotropic and gyrotropic backstreaming ion distributions in the quasi-perpendicular ion foreshock région '', J. Geophys. Res., 120, pp 7154-7171, doi = 10.1002/2015JA021018.
NASA Astrophysics Data System (ADS)
Zhang, Wei
2011-07-01
The longitudinal dispersion coefficient, DL, is a fundamental parameter of longitudinal solute transport models: the advection-dispersion (AD) model and various deadzone models. Since DL cannot be measured directly, and since its calibration using tracer test data is quite expensive and not always available, researchers have developed various methods, theoretical or empirical, for estimating DL by easier available cross-sectional hydraulic measurements (i.e., the transverse velocity profile, etc.). However, for known and unknown reasons, DL cannot be satisfactorily predicted using these theoretical/empirical formulae. Either there is very large prediction error for theoretical methods, or there is a lack of generality for the empirical formulae. Here, numerical experiments using Mike21, a software package that implements one of the most rigorous two-dimensional hydrodynamic and solute transport equations, for longitudinal solute transport in hypothetical streams, are presented. An analysis of the evolution of simulated solute clouds indicates that the two fundamental assumptions in Fischer's longitudinal transport analysis may be not reasonable. The transverse solute concentration distribution, and hence the longitudinal transport appears to be controlled by a dimensionless number ?, where Q is the average volumetric flowrate, Dt is a cross-sectional average transverse dispersion coefficient, and W is channel flow width. A simple empirical ? relationship may be established. Analysis and a revision of Fischer's theoretical formula suggest that ɛ influences the efficiency of transverse mixing and hence has restraining effect on longitudinal spreading. The findings presented here would improve and expand our understanding of longitudinal solute transport in open channel flow.
The 1963 Vajont landslide (Italy) simulated through a numerical 2D code
NASA Astrophysics Data System (ADS)
Zaniboni, Filippo; Ausilia Paparo, Maria; Elsen, Katharina; Tinti, Stefano
2013-04-01
On October 9th, 1963, a huge mass of about 260 million m3 collapsed along Mt. Toc flank into the artificial lake called Vajont and generated a gigantic wave that invested the town of Longarone (North-East Italy, about 100 km north of Venice), provoking about 2000 casualties. The event started a public debate on the responsibilities for the disaster, and also raised crucial issues for the scientific and engineering community, regarding reservoir flank instability and safety of the hydroelectric plant. The peculiar features of the event were immediately evident. The clay layers remained uncovered in the upper part of the detachment niche, supporting the hypothesis of a well-defined pre-existing sliding surface, that could explain the high falling velocity (around 20 m/s as a maximum) and the compactness of the deposit layers that were found to sit almost unperturbed on the bottom of the valley. The numerical study presented here contributes to the understanding of dynamics of the Vajont landslide. It is found that the accurate knowledge of the pre- and post-slide morphology provides tight constraints on the parameters of the numerical model, that are tuned to fit the observed deposit. Numerical simulations are carried out by means of the in-house built code UBO-BLOCK2. The initial sliding body is divided into a mesh of interacting volume-conserving blocks, whose motion is computed numerically. The friction coefficient at the base of the landslide is determined through a best fit search by maximizing the degree of overlapping between the calculated and observed deposits. Our best solution is also able to account for the observed slight easterly rotation of the mass, the different behaviors of the eastern and western part of the sliding surface and the retrogressive motion of the slide that after climbing up the opposite flank of the valley reverted velocity to settle down on the bottom of the valley.
NASA Astrophysics Data System (ADS)
Dages, Cecile; Samouelian, Anatja; Lanoix, Marthe; Dollinger, Jeanne; Chakkour, Sara; Chovelon, Gabrielle; Trabelsi, Khouloud; Voltz, Marc
2015-04-01
Ditches are involved in the transfer of pesticide to surface and groundwaters (e.g. Louchart et al., 2001). Soil horizons underlying ditch beds may present specific soil characteristics compared to neighbouring field soils due to erosion/deposition processes, to the specific biological activities (rooting dynamic and animal habitat) in the ditches (e.g. Vaughan et al., 2008) and to management practices (burning, dredging, mowing,...). Moreover, in contrast to percolation processes in field soils that can be assumed to be mainly 1D vertical, those occurring in the ditch beds are by essence 2D or even 3D. Nevertheless, due to a lake of knowledge, these specific aspects of transfer within ditch beds are generally omitted for hydrological simulation at the catchment scale (Mottes et al., 2014). Accordingly, the aims of this study were i) to characterize subsurface solute transfer through ditch beds and ii) to determine equivalent hydraulic parameters of the ditch beds for use in catchment scale hydrological simulations. A complementary aim was to evaluate the error in predictions performed when percolation in ditches is assumed to be similar to that in the neighbouring field soil. First, bromide transfer experiments were performed on undisturbed soil column (15 cm long with a 15 cm inner-diameter), horizontally and vertically sampled within each soil horizon underlying a ditch bed and within the neighboring field. Columns were sampled at the Roujan catchment (Hérault, France), which belongs to the long term Mediterranean hydrological observatory OMERE (Voltz and Albergel, 2002). Second, for each column, a set of parameters was determined by inverse optimization with mobile-immobile or dual permeability models, with CXTFIT (Toride et al., 1999) or with HYDRUS (Simunek et al., 1998). Third, infiltration and percolation in the ditch was simulated by a 2D flow domain approach considering the 2D variation in hydraulic properties of the cross section of a ditch bed. Last
Monte Carlo simulations of new 2D ripple filters for particle therapy facilities.
Ringbæk, Toke Printz; Weber, Uli; Petersen, Jørgen B; Thomsen, Bjarne; Bassler, Niels
2014-01-01
At particle therapy facilities with pencil beam scanning, the implementation of a ripple filter (RiFi) broadens the Bragg peak (BP), which leads to fewer energy steps from the accelerator required to obtain an homogeneous dose coverage of the planned target volume (PTV). At the Universitätsklinikum Gießen und Marburg, Germany, a new second generation RiFi has been developed with two-dimensional groove structures. In this work we evaluate this new RiFi design. The Monte Carlo (MC) code SHIELD-HIT12A is used to determine the RiFi-induced inhomogeneities in the dose distribution for various ion types, initial particle energies and distances from the RiFi to the phantom surface as well as in the depth of the phantom. The beam delivery and monitor system (BAMS) used at Marburg, the Heidelberg Ionentherapiezentrum (HIT), Universitätsklinikum Heidelberg, Germany and the GSI Helmholtzzentrum für Schwerionenforschung, Darmstadt, Germany is modeled and simulated. To evaluate the PTV dose coverage performance of the new RiFi design, the heavy ion treatment planning system TRiP98 is used for dose optimization. SHIELD-HIT12A is used to prepare the facility-specific physical dose kernels needed by TRiP, and for recalculating the physical dose distribution after TRiP optimization. At short distances from the RiFi to the phantom surface fine structures in the dose distribution are observed. For various RiFis, ion types and initial particle energies the distance dmax at which maximum dose inhomogeneity occurs is found and an expression for dmax is deduced. The distance d0.01 at which the dose inhomogeneity is less than 1% is estimated and used as a threshold distance at which dose distributions are considered homogeneous. The MC data are found to agree with analytical expressions for dmax and d0.01; both are inversely related to the angular distribution. Increasing scatter from the beam delivery and monitoring system results in reduced dmax and d0.01. Furthermore, dmax and d0
NASA Astrophysics Data System (ADS)
Campforts, Benjamin; Vanacker, Veerle; Vanderborght, Jan; Baken, Stijn; Smolders, Erik; Govers, Gerard
2016-04-01
Meteoric 10Be allows for the quantification of vertical and lateral soil fluxes over long time scales (103-105 yr). However, the mobility of meteoric 10Be in the soil system makes a translation of meteoric 10Be inventories into erosion and deposition rates complex. Here, we present a spatially explicit 2D model simulating the behaviour of meteoric 10Be on a hillslope. The model consists of two parts. The first component deals with advective and diffusive mobility of meteoric 10Be within the soil profile, and the second component describes lateral soil and meteoric 10Be fluxes over the hillslope. Soil depth is calculated dynamically, accounting for soil production through weathering as well as downslope fluxes of soil due to creep, water and tillage erosion. Synthetic model simulations show that meteoric 10Be inventories can be related to erosion and deposition across a wide range of geomorphological and pedological settings. Our results also show that meteoric 10Be can be used as a tracer to detect human impact on soil fluxes for soils with a high affinity for meteoric 10Be. However, the quantification of vertical mobility is essential for a correct interpretation of the observed variations in meteoric 10Be profiles and inventories. Application of the Be2D model to natural conditions using data sets from the Southern Piedmont (Bacon et al., 2012) and Appalachian Mountains (Jungers et al., 2009; West et al., 2013) allows to reliably constrain parameter values. Good agreement between simulated and observed meteoric 10Be concentrations and inventories is obtained with realistic parameter values. Furthermore, our results provide detailed insights into the processes redistributing meteoric 10Be at the soil-hillslope scale.
Bolmatov, Dima; Zhernenkov, Mikhail; Zav’yalov, Dmitry; Cai, Yong Q.; Cunsolo, Alessandro
2016-08-19
Here in this work we report on terahertz phononic excitations in 2D gold nanoparticle arrays in a water matrix through a series of large-scale molecular dynamics simulations. For the first time, we observe acoustic Dirac-like crossings in H (H_{2}O) atomic (molecular) networks which emerge due to an intraband phononic scattering. These crossings are the phononic fingerprints of ice-like arrangements of H (H_{2}O) atomic (molecular) networks at nanometer scale. We reveal how phononic excitations in metallic nanoparticles and the water matrix reciprocally impact on one another providing the mechanism for the THz phononics manipulation via structural engineering. In addition, we show that by tuning the arrangement of 2D gold nanoparticle assemblies the Au phononic polarizations experience sub-terahertz hybridization (Kohn anomaly) due to surface electron-phonon relaxation processes. This opens the way for the sound control and manipulation in soft matter metamaterials at nanoscale.
Bolmatov, Dima; Zhernenkov, Mikhail; Zav’yalov, Dmitry; ...
2016-08-19
Here in this work we report on terahertz phononic excitations in 2D gold nanoparticle arrays in a water matrix through a series of large-scale molecular dynamics simulations. For the first time, we observe acoustic Dirac-like crossings in H (H2O) atomic (molecular) networks which emerge due to an intraband phononic scattering. These crossings are the phononic fingerprints of ice-like arrangements of H (H2O) atomic (molecular) networks at nanometer scale. We reveal how phononic excitations in metallic nanoparticles and the water matrix reciprocally impact on one another providing the mechanism for the THz phononics manipulation via structural engineering. In addition, we showmore » that by tuning the arrangement of 2D gold nanoparticle assemblies the Au phononic polarizations experience sub-terahertz hybridization (Kohn anomaly) due to surface electron-phonon relaxation processes. This opens the way for the sound control and manipulation in soft matter metamaterials at nanoscale.« less
Bolmatov, Dima; Zhernenkov, Mikhail; Zav’yalov, Dmitry; Cai, Yong Q.; Cunsolo, Alessandro
2016-08-19
Here in this work we report on terahertz phononic excitations in 2D gold nanoparticle arrays in a water matrix through a series of large-scale molecular dynamics simulations. For the first time, we observe acoustic Dirac-like crossings in H (H_{2}O) atomic (molecular) networks which emerge due to an intraband phononic scattering. These crossings are the phononic fingerprints of ice-like arrangements of H (H_{2}O) atomic (molecular) networks at nanometer scale. We reveal how phononic excitations in metallic nanoparticles and the water matrix reciprocally impact on one another providing the mechanism for the THz phononics manipulation via structural engineering. In addition, we show that by tuning the arrangement of 2D gold nanoparticle assemblies the Au phononic polarizations experience sub-terahertz hybridization (Kohn anomaly) due to surface electron-phonon relaxation processes. This opens the way for the sound control and manipulation in soft matter metamaterials at nanoscale.
FireStem2D – A Two-Dimensional Heat Transfer Model for Simulating Tree Stem Injury in Fires
Chatziefstratiou, Efthalia K.; Bohrer, Gil; Bova, Anthony S.; Subramanian, Ravishankar; Frasson, Renato P. M.; Scherzer, Amy; Butler, Bret W.; Dickinson, Matthew B.
2013-01-01
FireStem2D, a software tool for predicting tree stem heating and injury in forest fires, is a physically-based, two-dimensional model of stem thermodynamics that results from heating at the bark surface. It builds on an earlier one-dimensional model (FireStem) and provides improved capabilities for predicting fire-induced mortality and injury before a fire occurs by resolving stem moisture loss, temperatures through the stem, degree of bark charring, and necrotic depth around the stem. We present the results of numerical parameterization and model evaluation experiments for FireStem2D that simulate laboratory stem-heating experiments of 52 tree sections from 25 trees. We also conducted a set of virtual sensitivity analysis experiments to test the effects of unevenness of heating around the stem and with aboveground height using data from two studies: a low-intensity surface fire and a more intense crown fire. The model allows for improved understanding and prediction of the effects of wildland fire on injury and mortality of trees of different species and sizes. PMID:23894599
FireStem2D--a two-dimensional heat transfer model for simulating tree stem injury in fires.
Chatziefstratiou, Efthalia K; Bohrer, Gil; Bova, Anthony S; Subramanian, Ravishankar; Frasson, Renato P M; Scherzer, Amy; Butler, Bret W; Dickinson, Matthew B
2013-01-01
FireStem2D, a software tool for predicting tree stem heating and injury in forest fires, is a physically-based, two-dimensional model of stem thermodynamics that results from heating at the bark surface. It builds on an earlier one-dimensional model (FireStem) and provides improved capabilities for predicting fire-induced mortality and injury before a fire occurs by resolving stem moisture loss, temperatures through the stem, degree of bark charring, and necrotic depth around the stem. We present the results of numerical parameterization and model evaluation experiments for FireStem2D that simulate laboratory stem-heating experiments of 52 tree sections from 25 trees. We also conducted a set of virtual sensitivity analysis experiments to test the effects of unevenness of heating around the stem and with aboveground height using data from two studies: a low-intensity surface fire and a more intense crown fire. The model allows for improved understanding and prediction of the effects of wildland fire on injury and mortality of trees of different species and sizes.
NASA Astrophysics Data System (ADS)
Humair, F.; Matasci, B.; Carrea, D.; Pedrazzini, A.; Loye, A.; Pedrozzi, G.; Nicolet, P.; Jaboyedoff, M.
2012-04-01
account the results of the experimental testing are performed and compared with the a-priori simulations. 3D simulations were performed using a software that takes into account the effect of the forest cover in the blocky trajectory (RockyFor 3D) and an other that neglects this aspect (Rotomap; geo&soft international). 2D simulation (RocFall; Rocscience) profiles were located in the blocks paths deduced from 3D simulations. The preliminary results show that: (1) high speed movies are promising and allow us to track the blocks using video software, (2) the a-priori simulations tend to overestimate the runout distance which is certainly due to an underestimation of the obstacles as well as the breaking of the failing rocks which is not taken into account in the models, (3) the trajectories deduced from both a-priori simulation and real size experiment highlights the major influence of the channelized slope morphology on rock paths as it tends to follow the flow direction. This indicates that the 2D simulation have to be performed along the line of flow direction.
NASA Astrophysics Data System (ADS)
Wolfs, Cecile J. A.; Brás, Mariana G.; Schyns, Lotte E. J. R.; Nijsten, Sebastiaan M. J. J. G.; van Elmpt, Wouter; Scheib, Stefan G.; Baltes, Christof; Podesta, Mark; Verhaegen, Frank
2017-08-01
The aim of this work is to assess the performance of 2D time-integrated (2D-TI), 2D time-resolved (2D-TR) and 3D time-integrated (3D-TI) portal dosimetry in detecting dose discrepancies between the planned and (simulated) delivered dose caused by simulated changes in the anatomy of lung cancer patients. For six lung cancer patients, tumor shift, tumor regression and pleural effusion are simulated by modifying their CT images. Based on the modified CT images, time-integrated (TI) and time-resolved (TR) portal dose images (PDIs) are simulated and 3D-TI doses are calculated. The modified and original PDIs and 3D doses are compared by a gamma analysis with various gamma criteria. Furthermore, the difference in the D 95% (ΔD 95%) of the GTV is calculated and used as a gold standard. The correlation between the gamma fail rate and the ΔD 95% is investigated, as well the sensitivity and specificity of all combinations of portal dosimetry method, gamma criteria and gamma fail rate threshold. On the individual patient level, there is a correlation between the gamma fail rate and the ΔD 95%, which cannot be found at the group level. The sensitivity and specificity analysis showed that there is not one combination of portal dosimetry method, gamma criteria and gamma fail rate threshold that can detect all simulated anatomical changes. This work shows that it will be more beneficial to relate portal dosimetry and DVH analysis on the patient level, rather than trying to quantify a relationship for a group of patients. With regards to optimizing sensitivity and specificity, different combinations of portal dosimetry method, gamma criteria and gamma fail rate should be used to optimally detect certain types of anatomical changes.
Wolfs, Cecile J A; Brás, Mariana G; Schyns, Lotte E J R; Nijsten, Sebastiaan M J J G; van Elmpt, Wouter; Scheib, Stefan G; Baltes, Christof; Podesta, Mark; Verhaegen, Frank
2017-07-12
The aim of this work is to assess the performance of 2D time-integrated (2D-TI), 2D time-resolved (2D-TR) and 3D time-integrated (3D-TI) portal dosimetry in detecting dose discrepancies between the planned and (simulated) delivered dose caused by simulated changes in the anatomy of lung cancer patients. For six lung cancer patients, tumor shift, tumor regression and pleural effusion are simulated by modifying their CT images. Based on the modified CT images, time-integrated (TI) and time-resolved (TR) portal dose images (PDIs) are simulated and 3D-TI doses are calculated. The modified and original PDIs and 3D doses are compared by a gamma analysis with various gamma criteria. Furthermore, the difference in the D 95% (ΔD 95%) of the GTV is calculated and used as a gold standard. The correlation between the gamma fail rate and the ΔD 95% is investigated, as well the sensitivity and specificity of all combinations of portal dosimetry method, gamma criteria and gamma fail rate threshold. On the individual patient level, there is a correlation between the gamma fail rate and the ΔD 95%, which cannot be found at the group level. The sensitivity and specificity analysis showed that there is not one combination of portal dosimetry method, gamma criteria and gamma fail rate threshold that can detect all simulated anatomical changes. This work shows that it will be more beneficial to relate portal dosimetry and DVH analysis on the patient level, rather than trying to quantify a relationship for a group of patients. With regards to optimizing sensitivity and specificity, different combinations of portal dosimetry method, gamma criteria and gamma fail rate should be used to optimally detect certain types of anatomical changes.
Sagert, Irina; Even, Wesley Paul; Strother, Terrance Timothy
2017-05-17
Here, we perform two-dimensional implosion simulations using a Monte Carlo kinetic particle code. The application of a kinetic transport code is motivated, in part, by the occurrence of nonequilibrium effects in inertial confinement fusion capsule implosions, which cannot be fully captured by hydrodynamic simulations. Kinetic methods, on the other hand, are able to describe both continuum and rarefied flows. We perform simple two-dimensional disk implosion simulations using one-particle species and compare the results to simulations with the hydrodynamics code rage. The impact of the particle mean free path on the implosion is also explored. In a second study, we focusmore » on the formation of fluid instabilities from induced perturbations. We find good agreement with hydrodynamic studies regarding the location of the shock and the implosion dynamics. Differences are found in the evolution of fluid instabilities, originating from the higher resolution of rage and statistical noise in the kinetic studies.« less
Analysis of Highly-Resolved Simulations of 2-D Humps Toward Improvement of Second-Moment Closures
NASA Technical Reports Server (NTRS)
Jeyapaul, Elbert; Rumsey Christopher
2013-01-01
Fully resolved simulation data of flow separation over 2-D humps has been used to analyze the modeling terms in second-moment closures of the Reynolds-averaged Navier- Stokes equations. Existing models for the pressure-strain and dissipation terms have been analyzed using a priori calculations. All pressure-strain models are incorrect in the high-strain region near separation, although a better match is observed downstream, well into the separated-flow region. Near-wall inhomogeneity causes pressure-strain models to predict incorrect signs for the normal components close to the wall. In a posteriori computations, full Reynolds stress and explicit algebraic Reynolds stress models predict the separation point with varying degrees of success. However, as with one- and two-equation models, the separation bubble size is invariably over-predicted.
NASA Astrophysics Data System (ADS)
Schiettekatte, François; Chicoine, Martin
2016-03-01
Corteo is a program that implements Monte Carlo (MC) method to simulate ion beam analysis (IBA) spectra of several techniques by following the ions trajectory until a sufficiently large fraction of them reach the detector to generate a spectrum. Hence, it fully accounts for effects such as multiple scattering (MS). Here, a version of Corteo is presented where the target can be a 2D or 3D image. This image can be derived from micrographs where the different compounds are identified, therefore bringing extra information into the solution of an IBA spectrum, and potentially significantly constraining the solution. The image intrinsically includes many details such as the actual surface or interfacial roughness, or actual nanostructures shape and distribution. This can for example lead to the unambiguous identification of structures stoichiometry in a layer, or at least to better constraints on their composition. Because MC computes in details the trajectory of the ions, it simulates accurately many of its aspects such as ions coming back into the target after leaving it (re-entry), as well as going through a variety of nanostructures shapes and orientations. We show how, for example, as the ions angle of incidence becomes shallower than the inclination distribution of a rough surface, this process tends to make the effective roughness smaller in a comparable 1D simulation (i.e. narrower thickness distribution in a comparable slab simulation). Also, in ordered nanostructures, target re-entry can lead to replications of a peak in a spectrum. In addition, bitmap description of the target can be used to simulate depth profiles such as those resulting from ion implantation, diffusion, and intermixing. Other improvements to Corteo include the possibility to interpolate the cross-section in angle-energy tables, and the generation of energy-depth maps.
NASA Astrophysics Data System (ADS)
Awad, Esam; Toorman, Erik; Lacor, Chris
2009-06-01
In this study, the performance of the horizontal large eddy simulation module, developed at the University of Leuven (HLES-KULeuven module) is assessed. A comparison between different subgrid scale models has been carried out. The study is concerned with the non-rotating and unstratified flows. The results of the simulation for an oscillatory backward facing (BFS) flow are presented in case of an expanding flume based on a one-length scale approach and a two-length scale approach. Three subgrid scale (SGS) models have been tested: Smagorinsky SGS model (Smagorinsky, J., (1963). General circulation experiments with the primitive equations, I. the basic experiments. Monthly Weather Review, 91(3), 99-164), Uittenbogaard SGS model (Uittenbogaard, R.E., and van Vossen, B., (2004). Subgrid-scale model for quasi-2D turbulence in shallow water. Shallow Flows. Jirka and Uijttewaal (Eds.), Taylor & Francis Group, London, ISBN 90 5809 700 5) and a proposed two-length scale approach. The first two models are considered to be a one-length scale models. A simulation without a subgrid scale model for the horizontal mixing has also been conducted. In all simulations, a quadratic friction model parameterizes the dissipation produced by the 3D-subdepth scale turbulence. The two-length scale concept uses a newly mixing length formulation for the quasi-2D turbulence and doesn't depend on the filter width in contrast to the one-length scale approach, in which the mixing length is function of the filter width. The outputs of the HLES-KULeuven module have been compared with the experimental data taken from Stelling, G.S., and Wang, L.X., (1984). Experiments and computations on separating flow in an expanding flume. Dept. Civil Engineering, Delft University of Technology, Report 2-84.). The two-length scale approach has been validated with experimental data from SERC Flood Channel Facility at HR Wallingford. In general, there is a qualitative agreement with the experimental data. It has
SPH non-Newtonian Model for Ice Sheet and Ice Shelf Dynamics
Tartakovsky, Alexandre M.; Pan, Wenxiao; Monaghan, Joseph J.
2012-07-07
We propose a new three-dimensional smoothed particle hydrodynamics (SPH) non-Newtonian model to study coupled ice sheet and ice shelf dynamics. Most existing ice sheet numerical models use a grid-based Eulerian approach, and are usually restricted to shallow ice sheet and ice shelf approximations of the momentum conservation equation. SPH, a fully Lagrangian particle method, solves the full momentum conservation equation. SPH method also allows modeling of free-surface flows, large material deformation, and material fragmentation without employing complex front-tracking schemes, and does not require re-meshing. As a result, SPH codes are highly scalable. Numerical accuracy of the proposed SPH model is first verified by simulating a plane shear flow with a free surface and the propagation of a blob of ice along a horizontal surface. Next, the SPH model is used to investigate the grounding line dynamics of ice sheet/shelf. The steady position of the grounding line, obtained from our SPH simulations, is in good agreement with laboratory observations for a wide range of bedrock slopes, ice-to-fluid density ratios, and flux. We examine the effect of non-Newtonian behavior of ice on the grounding line dynamics. The non-Newtonian constitutive model is based on Glen's law for a creeping flow of a polycrystalline ice. Finally, we investigate the effect of a bedrock geometry on a steady-state position of the grounding line.
Transfert radiatif numerique pour un code SPH
NASA Astrophysics Data System (ADS)
Viau, Joseph Edmour Serge
2001-03-01
Le besoin de reproduire la formation d'etoiles par simulations numeriques s'est fait de plus en plus present au cours des 30 dernieres annees. Depuis Larson (1968), les codes de simulations n'ont eu de cesse de s'ameliorer. D'ailleurs, en 1977, Lucy introduit une autre methode de calcul venant concurrencer la methode par grille. Cette nouvelle facon de calculer utilise en effet des points a defaut d'utiliser des grilles, ce qui est une bien meilleure adaptation aux calculs d'un effondrement gravitationnel. Il restait cependant le probleme d'ajouter le transfert radiatif a un tel code. Malgre la proposition de Brookshaw (1984), qui nous montre une formule permettant d'ajouter le transfert radiatif sous la forme SPH tout en evitant la double sommation genante qu'elle implique, aucun code SPH a ce jour ne contient un transfert radiatif satisfaisant. Cette these presente pour la premiere fois un code SPH muni d'un transfert radiatif adequat. Toutes les difficultes ont pu etre surmontees afin d'obtenir finalement le transfert radiatif "vrai" qui survient dans l'effondrement d'un nuage moleculaire. Pour verifier l'integrite de nos resultats, une comparaison avec le nonisothermal test case de Boss & Myhill (1993) nous revele un resultat fort satisfaisant. En plus de suivre fidelement la courbe de l'evolution de la temperature centrale en fonction de la densite centrale, notre code est exempt de toutes les anomalies rencontrees par les codes par grille. Le test du cas de la conduction thermique nous a lui aussi servit a verifier la fiabilite de notre code. La aussi les resultats sont fort satisfaisants. Faisant suite a ces resultats, le code fut utilise dans deux situations reelles de recherche, ce qui nous a permis de demontrer les nombreuses possibilites que nous donne notre nouveau code. Dans un premier temps, nous avons tudie le comportement de la temperature dans un disque d'accretion durant son evolution. Ensuite nous avons refait en partie une experience de Bonnell
NASA Astrophysics Data System (ADS)
Simão Ferreira, C. J.; Bijl, H.; van Bussel, G.; van Kuik, G.
2007-07-01
The implementation of wind energy conversion systems in the built environment renewed the interest and the research on Vertical Axis Wind Turbines (VAWT), which in this application present several advantages over Horizontal Axis Wind Turbines (HAWT). The VAWT has an inherent unsteady aerodynamic behavior due to the variation of angle of attack with the angle of rotation, perceived velocity and consequentially Reynolds number. The phenomenon of dynamic stall is then an intrinsic effect of the operation of a Vertical Axis Wind Turbine at low tip speed ratios, having a significant impact in both loads and power. The complexity of the unsteady aerodynamics of the VAWT makes it extremely attractive to be analyzed using Computational Fluid Dynamics (CFD) models, where an approximation of the continuity and momentum equations of the Navier-Stokes equations set is solved. The complexity of the problem and the need for new design approaches for VAWT for the built environment has driven the authors of this work to focus the research of CFD modeling of VAWT on: •comparing the results between commonly used turbulence models: URANS (Spalart-Allmaras and k-epsilon) and large eddy models (Large Eddy Simulation and Detached Eddy Simulation) •verifying the sensitivity of the model to its grid refinement (space and time), •evaluating the suitability of using Particle Image Velocimetry (PIV) experimental data for model validation. The 2D model created represents the middle section of a single bladed VAWT with infinite aspect ratio. The model simulates the experimental work of flow field measurement using Particle Image Velocimetry by Simão Ferreira et al for a single bladed VAWT. The results show the suitability of the PIV data for the validation of the model, the need for accurate simulation of the large eddies and the sensitivity of the model to grid refinement.
NASA Astrophysics Data System (ADS)
Deca, Jan; Lapenta, Giovanni; Lembège, Bertrand; Divin, Andrey; Markidis, Stefano; Amaya, Jorge
2013-04-01
We present the first 2D/3D fully kinetic Particle-in-Cell simulations of the solar wind interaction with lunar crustal magnetic anomalies. The simulations are performed using the implicit electromagnetic Particle-in-Cell code iPIC3D [Markidis, Lapenta & Rizwan-uddin, 2010]. Multiscale physics is resolved for all plasma components (heavy ions, protons and electrons) in the code, recently updated with a set of open boundary conditions designed for solar wind-body interactions. We use a dipole to model the crustal anomaly. The dipole center is located outside the computational domain and the boundary representing the lunar surface is modeled as a particle-absorbing plane. Photo-emission from the lunar surface is at this point not included, but will be in future work. We study the behaviour of the dipole model with variable surface magnetic field strength under changing solar wind conditions and confirm that lunar crustal magnetic fields may indeed be strong enough to stand off the solar wind and form a mini-magnetosphere, as suggested by MHD simulations [Harnett & Winglee, 2000, 2002, 2003] and spacecraft observations [Kurata et al., 2005; Halekas et al., 2008; Wieser et al., 2010]. 3D-PIC simulations reveal to be very helpful to analyze the diversion/braking of the particle flux and the characteristics of the resulting particles accumulation. The particle flux to the surface is significantly reduced at the magnetic anomaly, surrounded by a region of enhanced density due to the magnetic mirror effect. Finally we will present preliminary results on the interaction of the solar wind with weaker magnetic anomalies in which highly non-adiabatic interactions are expected.
A novel SPH method for sedimentation in a turbulent fluid
Kwon, Jihoe; Monaghan, J.J.
2015-11-01
A novel method for simulating sedimentation is described and applied to the sedimentation of dust in a turbulent fluid. We assume the dust grains are sufficiently numerous that they may be treated as a fluid and modelled by SPH particles. A different set of SPH particles describes the fluid. The equations of motion are therefore similar to those of Monaghan and Kocharyan [14] with the exception that the sedimentation of dust onto a solid surface is treated as if the surface mimics a sink for the dust fluid. The continuity equation for the dust then contains a sink term that can be modelled in the SPH formulation by allowing the mass of each SPH dust particle to decrease when it is sufficiently close to the boundary. We apply this method both to sedimentation in a nearly static fluid, and to sedimentation in a turbulent fluid. In the latter case we produce the turbulence by both a mechanical stirrer and by a stochastic algorithm. Our results agree very closely with the experiments of Martin and Nokes.
Efficient simulation of 2+2-D multi-species plasmas waves using an Eulerian Vlasov code
NASA Astrophysics Data System (ADS)
Banks, Jeffrey; Berger, Richard; Chapman, Thomas; Hittinger, Jeffrey; Bruner, Stephan
2013-10-01
We discuss multi-species aspects of the Eulerian-based kinetic code LOKI that evolves the Vlasov-Poisson system in 2+2-dimensional phase space (Banks et al., Phys. Plasmas 18, 052102 (2011)). In order to control the inherent cost associated with phase-space simulation, our approach uses a minimally diffuse, fourth-order-accurate finite-volume discretization (Banks and Hittinger, IEEE T. Plasma Sci. 39, 2198-2207). The scheme is discretely conservative and controls unphysical oscillations. The details of the numerical scheme will be presented, and the implementation on modern highly concurrent parallel computers will be discussed. We will present results of 2D simulations of propagating ion acoustic waves (IAWs) created using an external driving potential. The evolution of the plasma wave field and associated self-consistent distribution of trapped electrons and ions is studied after the external drive is turned off. This work was performed under the auspices of the U.S. Department of Energy by Lawrence Livermore National Laboratory under Contract DE-AC52-07NA27344 and funded by the Laboratory Research and Development Program at LLNL under project tracking code 12-ERD-061.
Simulations of P-SV wave scattering due to cracks by the 2-D finite difference method
NASA Astrophysics Data System (ADS)
Suzuki, Yuji; Shiina, Takahiro; Kawahara, Jun; Okamoto, Taro; Miyashita, Kaoru
2013-12-01
We simulate P-SV wave scattering by 2-D parallel cracks using the finite difference method (FDM). Here, special emphasis is put on simplicity; we apply a standard FDM (second-order velocity-stress scheme with a staggered grid) to media including traction-free, infinitesimally thin cracks, which are expressed in a simple manner. As an accuracy test of the present method, we calculate the displacement discontinuity along an isolated crack caused by harmonic waves using the method, which is compared with the corresponding results based on a reliable boundary integral equation method. The test resultantly indicates that the present method yields sufficient accuracy. As an application of this method, we also simulate wave propagation in media with randomly distributed cracks. We experimentally determine the attenuation and velocity dispersion induced by scattering from the synthetic seismograms, using a waveform averaging technique. It is shown that the results are well explained by a theory based on the Foldy approximation, if the crack density is sufficiently low. The theory appears valid with a crack density up to at least 0.1 for SV wave incidence, whereas the validity limit appears lower for P wave incidence.
2D simulation of active species and ozone production in a multi-tip DC air corona discharge
NASA Astrophysics Data System (ADS)
Meziane, M.; Eichwald, O.; Sarrette, J. P.; Ducasse, O.; Yousfi, M.
2011-11-01
The present paper shows for the first time in the literature a complete 2D simulation of the ozone production in a DC positive multi-tip to plane corona discharge reactor crossed by a dry air flow at atmospheric pressure. The simulation is undertaken until 1 ms and involves tens of successive discharge and post-discharge phases. The air flow is stressed by several monofilament corona discharges generated by a maximum of four anodic tips distributed along the reactor. The nonstationary hydrodynamics model for reactive gas mixture is solved using the commercial FLUENT software. During each discharge phase, thermal and vibrational energies as well as densities of radical and metastable excited species are locally injected as source terms in the gas medium surrounding each tip. The chosen chemical model involves 10 neutral species reacting following 24 reactions. The obtained results allow us to follow the cartography of the temperature and the ozone production inside the corona reactor as a function of the number of high voltage anodic tips.
NASA Astrophysics Data System (ADS)
Gramusset, Anneli; Herrera, Paulo; Parada, Miguel Angel
2014-05-01
A thorough understanding of the thermal processes that occur in aquifers is essential to assess local and regional low enthalpy geothermal resources. The relationship between heat convection and heat conduction has been widely studied in basins around the world at a regional scale. However, few studies have focused on smaller, shallower basins containing free aquifers hosted in unconsolidated fluvial-alluvial sediments, like Santiago Basin. We use numerical modeling to simulate the fluid dynamics of the Santiago basin groundwater system under different thermal conditions. Despite the current computational advances, modeling such a complex system with a full 3D approach is still numerically time demanding and unstable. Besides, the basin has irregular geometry and variable hydraulic and thermal features. Thus, we performed a 2D model comprising a thin water saturated slice of sediments beneath the central part of the city, where the basin morphology is well constrained. We simulate coupled groundwater and heat flow throughout this vertical slice and we compare results for different scenarios that comprise different hydraulic, thermal and geometric parameters. Results obtained with certain hydraulic conductivities show that instabilities appear giving rise to free thermal convection in the deepest parts of the basin. If the system is split into several hydrogeological units, the onset of these instabilities is inhibited. Consequently, we suggest that the stratigraphic complexities of a fluvial-alluvial deposit should be considered to better understanding the thermal-driven groundwater fluid dynamics.
Efficient Neighborhood Search in SPH
NASA Astrophysics Data System (ADS)
Cruz Pérez, Juan Pablo; González Cervera, José Antonio
2013-10-01
One of the main problems found during the implementation of an N-body algorithm, is its inefficiency when the number of points to evaluate is increased. This is a consequence of the order O(N^2) of these methods. With this in mind, when we use the method of Smoothed Particle Hydrodynamics (SPH), it is necessary to find an algorithm that allows us to make the computation in an efficient way. The method presented in this article is of order O(N) , being more efficient as well as easy to implement, reducing the computing time.
NASA Astrophysics Data System (ADS)
Llanes, F.; dela Resma, M.; Ferrer, P.; Realino, V.; Aquino, D. T.; Eco, R. C.; Lagmay, A.
2013-12-01
From November 14 to December 3, 2004, Luzon Island was ravaged by 4 successive typhoons: Typhoon Mufia, Tropical Storm Merbok, Tropical Depression Winnie, and Super Typhoon Nanmadol. Tropical Depression Winnie was the most destructive of the four when it triggered landslides on November 29 that devastated the municipalities of Infanta, General Nakar, and Real in Quezon Province, southeast Luzon. Winnie formed east of Central Luzon on November 27 before it moved west-northwestward over southeastern Luzon on November 29. A total of 1,068 lives were lost and more than USD 170 million worth of damages to crops and infrastructure were incurred from the landslides triggered by Typhoon Winnie on November 29 and the flooding caused by the 4 typhoons. FLO-2D, a flood routing software for generating flood and debris flow hazard maps, was utilized to simulate the debris flows that could potentially affect the study area. Based from the rainfall intensity-duration-frequency analysis, the cumulative rainfall from typhoon Winnie on November 29 which was approximately 342 mm over a 9-hour period was classified within a 100-year return period. The Infanta station of the Philippine Atmospheric Geophysical and Astronomical Services Administration (PAGASA) was no longer able to measure the amount of rainfall after this period because the rain gauge in that station was washed away by floods. Rainfall data with a 100-year return period was simulated over the watersheds delineated from a SAR-derived digital elevation model. The resulting debris flow hazard map was compared with results from field investigation and previous studies made on the landslide event. The simulation identified 22 barangays (villages) with a total of 45,155 people at risk of turbulent flow and flooding.
NASA Astrophysics Data System (ADS)
Machado, Christiano B.; Pereira, Wagner C. A.; Padilla, Frédéric; Laugier, Pascal
2012-05-01
Ultrasound axial transmission (UAT) has been proposed to the diagnosis and follow-up of fracture healing. Some researchers have already pointed out the influence of fracture length, geometry and callus composition on the ultrasound time-of-flight and attenuation, with experimental and simulation studies. The aim of this work was to develop a pilot study on the effect of bone fracture unevenness on UAT measurements. Two-dimensional (2D) numerical simulations of ultrasound wave propagation were run using a custom-made finite-difference time domain code (SimSonic2D). Numerical models were composed of two 4-mm thick bone plates, with fracture lengths varying from 0 to 4 mm. For each case, an upward (UWun) and downward (DWun) unevenness of 0.5, 1.0 and 1.5 mm was implemented in the second plate. The 1-MHz emitter and receptor transducers were placed at 40 mm from each other, 20 mm apart from the center fracture. Two configurations were considered: 1.5 mm above the plates (for the 0-mm unevenness case) and transducers in contact with bone plate. For each situation, the time-of-flight of the first arriving signal (TOFFAS) and the FAS energy amplitude loss measured by the sound pressure level (SPLFAS) were computed. Results showed that there was a linear increase in TOFFAS with increasing fracture length, and a decrease of SPLFAS with the presence of a discontinuity. TOFFAS values were decreased with UWun (-0.87 μs for UWun = 1.5 mm), and increased with DWun (+0.99 μs for DWun = 1.5 mm). The SPLFAS increased with both UWun (+3.54 dB for UWun = 1.5 mm) and DWun (+8.15 dB for DWun = 1.5 mm). Both parameters showed the same variability. When transducers were put in contact with bone surface, fracture unevenness had no influence on TOF and SPL estimates. Previous works have already demonstrated that a fracture of 3 mm can increase TOFFAS in an order of 1 μs. Considering these preliminary results, it can be concluded that, although the variable fracture unevenness (until 1
A comparison of SPH schemes for the compressible Euler equations
NASA Astrophysics Data System (ADS)
Puri, Kunal; Ramachandran, Prabhu
2014-01-01
We review the current state-of-the-art Smoothed Particle Hydrodynamics (SPH) schemes for the compressible Euler equations. We identify three prototypical schemes and apply them to a suite of test problems in one and two dimensions. The schemes are in order, standard SPH with an adaptive density kernel estimation (ADKE) technique introduced Sigalotti et al. (2008) [44], the variational SPH formulation of Price (2012) [33] (referred herein as the MPM scheme) and the Godunov type SPH (GSPH) scheme of Inutsuka (2002) [12]. The tests investigate the accuracy of the inviscid discretizations, shock capturing ability and the particle settling behavior. The schemes are found to produce nearly identical results for the 1D shock tube problems with the MPM and GSPH schemes being the most robust. The ADKE scheme requires parameter values which must be tuned to the problem at hand. We propose an addition of an artificial heating term to the GSPH scheme to eliminate unphysical spikes in the thermal energy at the contact discontinuity. The resulting modification is simple and can be readily incorporated in existing codes. In two dimensions, the differences between the schemes is more evident with the quality of results determined by the particle distribution. In particular, the ADKE scheme shows signs of particle clumping and irregular motion for the 2D strong shock and Sedov point explosion tests. The noise in particle data is linked with the particle distribution which remains regular for the Hamiltonian formulations (MPM and GSPH) and becomes irregular for the ADKE scheme. In the interest of reproducibility, we make available our implementation of the algorithms and test problems discussed in this work.
NASA Technical Reports Server (NTRS)
Li, Xiaofan; Sui, C.-H.; Lau, K.-M.
1999-01-01
The phase relation between the perturbation kinetic energy (K') associated with the tropical convection and the horizontal-mean moist available potential energy (bar-P) associated with environmental conditions is investigated by an energetics analysis of a numerical experiment. This experiment is performed using a 2-D cloud resolving model forced by the TOGA-COARE derived vertical velocity. The imposed upward motion leads to a decrease of bar-P directly through the associated vertical advective cooling, and to an increase of K' directly through cloud related processes, feeding the convection. The maximum K' and its maximum growth rate lags and leads, respectively, the maximum imposed large-scale upward motion by about 1-2 hours, indicating that convection is phase locked with large-scale forcing. The dominant life cycle of the simulated convection is about 9 hours, whereas the time scales of the imposed large-scale forcing are longer than the diurnal cycle. In the convective events, maximum growth of K' leads maximum decay of the perturbation moist available potential energy (P') by about 3 hours through vertical heat transport by perturbation circulation, and perturbation cloud heating. Maximum decay of P' leads maximum decay of bar-P by about one hour through the perturbation radiative, processes, the horizontal-mean cloud heating, and the large-scale vertical advective cooling. Therefore, maximum gain of K' occurs about 4-5 hours before maximum decay of bar-P.
Lee, K. H.; Lee, L. C.; Omura, Y.
2011-09-15
We carried out a series of 2D simulations to study the beam instability and cyclotron maser instability (CMI) with the initial condition that a population of tenuous energetic electrons with a ring-beam distribution is present in a magnetized background plasma. In this paper, weakly relativistic cases are discussed with the ring-beam kinetic energy ranging from 25 to 100 keV. The beam component leads to the two-stream or beam instability at an earlier stage, and the beam mode is coupled with Langmuir or whistler mode, leading to excitation of beam-Langmuir or beam-whistler waves. When the beam velocity is large with a strong beam instability, the initial ring-beam distribution is diffused in the parallel direction rapidly. The diffused distribution may still support CMI to amplify the X1 mode (the fundamental X mode). On the contrary, when the beam velocity is small and the beam instability is weak, CMI can amplify the Z1 (the fundamental Z mode) effectively while the O1 (the fundamental O mode) and X2 (the second harmonic X mode) modes are very weak and the X1 mode is not excited. In this report, different cases with various parameters are presented and discussed for a comprehensive understanding of ring-beam instabilities.
Reconnection and small-scale fields in 2D-3V hybrid-kinetic driven turbulence simulations
NASA Astrophysics Data System (ADS)
Cerri, S. S.; Califano, F.
2017-02-01
The understanding of the fundamental properties of turbulence in collisionless plasmas, such as the solar wind, is a frontier problem in plasma physics. In particular, the occurrence of magnetic reconnection in turbulent plasmas and its interplay with a fully-developed turbulent state is still a matter of great debate. Here we investigate the properties of small-scale electromagnetic fluctuations and the role of fast magnetic reconnection in the development of a quasi-steady turbulent state by means of 2D-3V high-resolution Vlasov–Maxwell simulations. At the largest scales turbulence is fed by external random forcing. We show that large-scale turbulent motions establish a -5/3 spectrum at {k}\\perp {d}i< 1 and, at the same time, feed the formation of current sheets where magnetic reconnection occurs. As a result coherent magnetic structures are generated which, together with the rise of the associated small-scale non-ideal electric field, mediate the transition between the inertial and the subproton-scale spectrum. A mechanism that boosts the magnetic reconnection process is identified, making the generation of coherent structures rapid enough to be competitive with wave mode interactions and leading to the formation of a fully-developed turbulent spectrum across the so-called ion break.
NASA Astrophysics Data System (ADS)
Williams, Westin B.; Michaels, Thomas E.; Michaels, Jennifer E.
2017-02-01
Reliable detection of damage in composites is critically important for failure prevention in the aerospace industry since these materials are more frequently being used in high stress applications. Structural health monitoring (SHM) via guided wave sensors mounted on or embedded within a composite structure can help detect and localize damage in real-time while potentially reducing overall maintenance costs. One approach to guided wave SHM is sparse array imaging via the minimum variance algorithm, and it has been shown in prior work that incorporating expected scattering from defects of interest can improve the quality of damage localization and characterization. For this study, simulated damage in the form of attached magnets was used for estimating scattering from recorded wavefield data. Data were recorded on a circle centered at the damage location from multiple incident directions before and after the magnets were attached. Baseline subtraction is used to estimate scattering patterns for each incident direction, and these patterns are combined and interpolated to form a full 2-D scattering matrix. This matrix is then incorporated into the minimum variance imaging algorithm, and the efficacy of this scattering estimation methodology is evaluated by comparing the resulting sparse array images to those generated using simpler scattering assumptions.
NASA Astrophysics Data System (ADS)
Piani, C.; Montroull, N.; Saurral, R. I.
2014-12-01
The two dimensional bias correction methodology for temperature and precipitation, developed by Piani et al. (2012) for station data, was applied to the CCSM4 (NCAR) model gridded output from the CMIP5 dataset and a 40 year gridded dataset over Southeastern South America (Tencer et al., 2011; Jones et al., 2012). Copula density functions of observed temperature and precipitation showed significant structure when subsets of sixteen gridpoints were pooled together. By contrast no structure is detectable in copulas of GCM data. By construction, independent one dimensional bias correction of temperature and precipitation cannot correct copula density distributions hence, the 2D method is applied. The method is validated, as customary, by calibrating and subsequently validating the methodology with non-overlapping 20 year time periods. Visual inspection of single copula density functions for all grid points is unfeasible. Hence the bias correction method is validated by calculating a Kolmogorov-Smirnoff (KS) type statistic measuring the distance between observed and simulated and between observed and corrected copulas at each grid point. Results for the KS statistic are plotted in the figure shown. The methodology clearly shows great potential for application to climate impact modeling. References Jones, P. D., Lister, D. H., Harpham, C., Rusticucci, M. and Penalba, O. (2013), Construction of a daily precipitation grid for southeastern South America for the period 1961-2000. Int. J. Climatol., 33: 2508-2519. doi: 10.1002/joc.3605 Piani, C., &Haerter, J. O. (2012). Two dimensional bias correction of temperature and precipitation copulas in climate models. Geophysical Research Letters, 39(20). Tencer, B., Rusticucci, M., Jones, P., & Lister, D. (2011).A Southeastern South American Daily Gridded Dataset of Observed Surface Minimum and Maximum Temperature for 1961-2000. Bulletin of the American Meteorological Society, 92(10). Figure. Kolmogorov-Smirnoff type statistic
A 2-D FEM thermal model to simulate water flow in a porous media: Campi Flegrei caldera case study
NASA Astrophysics Data System (ADS)
Romano, V.; Tammaro, U.; Capuano, P.
2012-05-01
Volcanic and geothermal aspects both exist in many geologically young areas. In these areas the heat transfer process is of fundamental importance, so that the thermal and fluid-dynamic processes characterizing a viscous fluid in a porous medium are very important to understand the complex dynamics of the these areas. The Campi Flegrei caldera, located west of the city of Naples, within the central-southern sector of the large graben of Campanian plain, is a region where both volcanic and geothermal phenomena are present. The upper part of the geothermal system can be considered roughly as a succession of volcanic porous material (tuff) saturated by a mixture formed mainly by water and carbon dioxide. We have implemented a finite elements approach in transient conditions to simulate water flow in a 2-D porous medium to model the changes of temperature in the geothermal system due to magmatic fluid inflow, accounting for a transient phase, not considered in the analytical solutions and fluid compressibility. The thermal model is described by means of conductive/convective equations, in which we propose a thermal source represented by a parabolic shape function to better simulate an increase of temperature in the central part (magma chamber) of a box, simulating the Campi Flegrei caldera and using more recent evaluations, from literature, for the medium's parameters (specific heat capacity, density, thermal conductivity, permeability). A best-fit velocity for the permeant is evaluated by comparing the simulated temperatures with those measured in wells drilled by Agip (Italian Oil Agency) in the 1980s in the framework of geothermal exploration. A few tens of days are enough to reach the thermal steady state, showing the quick response of the system to heat injection. The increase in the pressure due to the heat transport is then used to compute ground deformation, in particular the vertical displacements characteristics of the Campi Flegrei caldera behaviour. The
NASA Astrophysics Data System (ADS)
Paszyński, Maciej; Pardo, David; Torres-Verdín, Carlos
2007-09-01
The paper presents parallel simulations of 3D resistivity logging measurements. These simulations are performed with a new geometry-based formulation with a 2D self-adaptive goal-oriented hp-adaptive strategy combined with a Fourier series expansion in a non-orthogonal system of coordinates. Numerical simulations analyze 3D resistivity effects occuring on deviated wells. We present a parallel implementation based on both domain decomposition and functional decomposition paradigms.
NASA Astrophysics Data System (ADS)
Sato, Haruo; Fehler, Michael C.
2016-10-01
The envelope broadening and the peak delay of the S-wavelet of a small earthquake with increasing travel distance are results of scattering by random velocity inhomogeneities in the earth medium. As a simple mathematical model, Sato proposed a new stochastic synthesis of the scalar wavelet envelope in 3-D von Kármán type random media when the centre wavenumber of the wavelet is in the power-law spectral range of the random velocity fluctuation. The essential idea is to split the random medium spectrum into two components using the centre wavenumber as a reference: the long-scale (low-wavenumber spectral) component produces the peak delay and the envelope broadening by multiple scattering around the forward direction; the short-scale (high-wavenumber spectral) component attenuates wave amplitude by wide angle scattering. The former is calculated by the Markov approximation based on the parabolic approximation and the latter is calculated by the Born approximation. Here, we extend the theory for the envelope synthesis of a wavelet in 2-D random media, which makes it easy to compare with finite difference (FD) simulation results. The synthetic wavelet envelope is analytically written by using the random medium parameters in the angular frequency domain. For the case that the power spectral density function of the random velocity fluctuation has a steep roll-off at large wavenumbers, the envelope broadening is small and frequency independent, and scattering attenuation is weak. For the case of a small roll-off, however, the envelope broadening is large and increases with frequency, and the scattering attenuation is strong and increases with frequency. As a preliminary study, we compare synthetic wavelet envelopes with the average of FD simulation wavelet envelopes in 50 synthesized random media, which are characterized by the RMS fractional velocity fluctuation ε = 0.05, correlation scale a = 5 km and the background wave velocity V0 = 4 km s-1. We use the radiation
NASA Technical Reports Server (NTRS)
Fleming, Eric L.; Jackman, Charles H.; Considine, David B.; Stolarski, Richard S.
1999-01-01
In this study, we examine the sensitivity of long lived tracers to changes in the base transport components in our 2-D model. Changes to the strength of the residual circulation in the upper troposphere and stratosphere and changes to the lower stratospheric K(sub zz) had similar effects in that increasing the transport rates decreased the overall stratospheric mean age, and increased the rate of removal of material from the stratosphere. Increasing the stratospheric K(sub yy) increased the mean age due to the greater recycling of air parcels through the middle atmosphere, via the residual circulation, before returning to the troposphere. However, increasing K(sub yy) along with self-consistent increases in the corresponding planetary wave drive, which leads to a stronger residual circulation, more than compensates for the K(sub yy)-effect, and produces significantly younger ages throughout the stratosphere. Simulations with very small tropical stratospheric K(sub yy) decreased the globally averaged age of air by as much as 25% in the middle and upper stratosphere, and resulted in substantially weaker vertical age gradients above 20 km in the extratropics. We found only very small stratospheric tracer sensitivity to the magnitude of the horizontal mixing across the tropopause, and to the strength of the mesospheric gravity wave drag and diffusion used in the model. We also investigated the transport influence on chemically active tracers and found a strong age-tracer correlation, both in concentration and calculated lifetimes. The base model transport gives the most favorable overall comparison with a variety of inert tracer observations, and provides a significant improvement over our previous 1995 model transport. Moderate changes to the base transport were found to provide modest agreement with some of the measurements. Transport scenarios with residence times ranging from moderately shorter to slightly longer relative to the base case simulated N2O lifetimes
Fediai, Artem; Ryndyk, Dmitry A; Cuniberti, Gianaurelio
2016-10-05
Up to now, the electrical properties of the contacts between 3D metals and 2D materials have never been computed at a fully ab initio level due to the huge number of atomic orbitals involved in a current path from an electrode to a pristine 2D material. As a result, there are still numerous open questions and controversial theories on the electrical properties of systems with 3D/2D interfaces-for example, the current path and the contact length scalability. Our work provides a first-principles solution to this long-standing problem with the use of the modular approach, a method which rigorously combines a Green function formalism with the density functional theory (DFT) for this particular contact type. The modular approach is a general approach valid for any 3D/2D contact. As an example, we apply it to the most investigated among 3D/2D contacts-metal/graphene contacts-and show its abilities and consistency by comparison with existing experimental data. As it is applicable to any 3D/2D interface, the modular approach allows the engineering of 3D/2D contacts with the pre-defined electrical properties.
Karmonik, Christof; Klucznik, Richard; Benndorf, Goetz
2008-01-01
Computational Fluid Dynamic (CFD) is increasingly being used for modeling hemodynamics in intracranial aneurysms. While CFD techniques are well established, need for validation of the results remains. By quantifying features in velocity patterns measured with 2D phase contrast magnetic resonance (pcMRI) in vivo and simulated with CFD, the role of pcMRI for providing reference data for the CFD simulation is explored. Unsteady CFD simulations were performed with inflow boundary conditions obtained from 2D pcMRI measurements of an aneurysm of the anterior communication artery. Intra-aneurysmal velocity profiles were recorded with 2D pcMRI and calculated with CFD. Relative areas of positive and negative velocity were calculated in these profiles for maximum and minimum inflow. Areas of positive and of negative velocity similar in shape were found in the velocity profiles obtained with both methods. Relative difference in size of the relative areas for the whole cardiac cycle ranged from 1%-25% (average 12%). 2D pcMRI is able to record velocity profiles in an aneurysm of the anterior commuting artery in vivo. These velocity profiles can serve as reference data for validation of CFD simulations. Further studies are needed to explore the role of pcMRI in the context of CFD simulations.
NASA Astrophysics Data System (ADS)
Lembege, B.; Savoini, P.; Stienlet, J.
2013-05-01
Two distinct ion populations backstreaming into the solar wind have been clearly evidenced by various space missions within the quasi-perpendicular region of the ion foreshock located upstream of the Earth's Bow shock (i.e. for 45° ≤ Theta_Bn ≤ 90°, where Theta_Bn is the angle between the shock normal and the upstream magnetostatic field): (i) field-aligned ion beams (« FAB ») characterized by a gyrotropic distribution, and (ii) gyro-phase bunched ions («GPB »), characterized by a NON gyrotropic distribution. The origin of these backstreaming ions has not been clearly identified and is presently analyzed with the help of 2D PIC simulation of a curved shock, where full curvature effects, time of flight effects and both electrons and ions dynamics are fully described within a self consistent approach. Present simulations evidence that these two populations can be effectively created directly by the shock front without invoking microinstabilities. The analysis of both individual and statistical ion trajectories evidences that: (i) two new parameters, namely the interaction time DT_inter and distance of penetration L_depth into the shock wave, play a key role and allow to discriminate these two populations. "GPB" population is characterized by a very short interaction time (DT_inter = 1 to 2 Tci) in comparison to the "FAB" population (DT_inter = 2 Tci to 10 Tci) which moves back and forth between the upstream edge of the shock front and the overshoot, where tci is the upstream ion gyroperiod. (ii) the importance of the injection angle (i.e. the angle between the normal of the shock front and the gyration velocity when ions reach the shock) to understand how the reflection process takes place. (iii) "FAB" population drifts along the curved shock front scanning a large Theta_Bn range from 90°. (iv) "GPB" population is embedded within the "FAB" population near the shock front which explains the difficulty to identify such a population in the experimental
NASA Astrophysics Data System (ADS)
Lee, Khil-Ha; Kim, Sung-Wook; Kim, Sang-Hyun
2014-05-01
model, called FLO-2D runs to simulate channel routing downstream to give the maximum water level. Once probable inundation areas are identified by the huge volume of water in the caldera lake, the unique geography, and the limited control capability, a potential hazard assessment can be represented. The study will contribute to build a geohazard map for the decision-makers and practitioners. Keywords: Volcanic flood, Caldera lake, Hazard assessment, Magma effusion Acknowledgement This research was supported by a grant [NEMA-BAEKDUSAN-2012-1-2] from the Volcanic Disaster Preparedness Research Center sponsored by National Emergency Management Agency of Korea.
Allain, Ariane; Chauvot de Beauchêne, Isaure; Langenfeld, Florent; Guarracino, Yann; Laine, Elodie; Tchertanov, Luba
2014-01-01
Allostery is a universal phenomenon that couples the information induced by a local perturbation (effector) in a protein to spatially distant regulated sites. Such an event can be described in terms of a large scale transmission of information (communication) through a dynamic coupling between structurally rigid (minimally frustrated) and plastic (locally frustrated) clusters of residues. To elaborate a rational description of allosteric coupling, we propose an original approach - MOdular NETwork Analysis (MONETA) - based on the analysis of inter-residue dynamical correlations to localize the propagation of both structural and dynamical effects of a perturbation throughout a protein structure. MONETA uses inter-residue cross-correlations and commute times computed from molecular dynamics simulations and a topological description of a protein to build a modular network representation composed of clusters of residues (dynamic segments) linked together by chains of residues (communication pathways). MONETA provides a brand new direct and simple visualization of protein allosteric communication. A GEPHI module implemented in the MONETA package allows the generation of 2D graphs of the communication network. An interactive PyMOL plugin permits drawing of the communication pathways between chosen protein fragments or residues on a 3D representation. MONETA is a powerful tool for on-the-fly display of communication networks in proteins. We applied MONETA for the analysis of communication pathways (i) between the main regulatory fragments of receptors tyrosine kinases (RTKs), KIT and CSF-1R, in the native and mutated states and (ii) in proteins STAT5 (STAT5a and STAT5b) in the phosphorylated and the unphosphorylated forms. The description of the physical support for allosteric coupling by MONETA allowed a comparison of the mechanisms of (a) constitutive activation induced by equivalent mutations in two RTKs and (b) allosteric regulation in the activated and non
NASA Astrophysics Data System (ADS)
Savoini, P.; Lembege, B.; Stienlet, J.
2012-04-01
The foreshock region is located upstream of the terrestrial bow shock and is characterized by energetic backstreaming particles (electrons and ions) issued from the shock and by an important wave activity as observed by many space missions. In order to analyse the foreshock region, a curved shock is simulated with the help of a 2 - D full particle (PIC) code, where full curvature and time of flight effects, and where both electrons and ions dynamics are fully described by a self consistent approach. The analysis is presently restricted to the quasi-perpendicular angular range defined by 45°≤ θBn ≤ 90°, where θBn is the angle between the shock normal and the upstream magnetostatic field, and we focus only on the ion foreshock. In a good agreement with experimental data, present preliminary results evidence two distinct ion populations collimated along the interplanetary magnetic field (IMF): (i) the Field-Aligned Beam population (hereafter named "FAB") and (ii) the gyro-phase bunch population (hereafter named "GPB") which differ from each other by their gyrotropic or non-gyrotropic behavior, respectively. Additionally, the "FAB" population is observed at the edge of the ion foreshock and near the curved shock front, while the "'GPB" population is observed deeper in the foreshock and further from the shock front. The analysis shows that no pitch angle scattering mechanism needs to be invoked to account for the generation of the "GPB", but rather additional criteria are necessary namely: the interaction time Δtint of backstreaming ions with the shock front and their downstream penetration depth. These criteria allow to evidence that (i) the "FAB" population corresponds to particles which move back and forth between the upstream edge of the front and the overshoot, and are characterized by a quite large Δtint (covering several local gyro-periods, 4 ≤ τci ≤ 12). In contrast, (ii) the "GPB" ions have suffered a very short interaction time (i.e. Δtint < 1
Kim, Kyungjoo; Parks, Michael L.; Perego, Mauro; Trask, Nathanial; Pan, Wenxiao
2016-11-09
ISPH code is developed to solve multi-physics meso-scale flow problems using implicit SPH method. In particular, the code can provides solutions for incompressible, multi phase flow and electro-kinetic flows.
SIMULATIONS OF 2D AND 3D THERMOCAPILLARY FLOWS BY A LEAST-SQUARES FINITE ELEMENT METHOD. (R825200)
Numerical results for time-dependent 2D and 3D thermocapillary flows are presented in this work. The numerical algorithm is based on the Crank-Nicolson scheme for time integration, Newton's method for linearization, and a least-squares finite element method, together with a matri...
SIMULATIONS OF 2D AND 3D THERMOCAPILLARY FLOWS BY A LEAST-SQUARES FINITE ELEMENT METHOD. (R825200)
Numerical results for time-dependent 2D and 3D thermocapillary flows are presented in this work. The numerical algorithm is based on the Crank-Nicolson scheme for time integration, Newton's method for linearization, and a least-squares finite element method, together with a matri...
A SPH Depth Integrated Model for Popocatepetl 2001 Lahar.
NASA Astrophysics Data System (ADS)
Haddad, B.; Pastor, M.; Palacios, D.; Muñoz, E.
2009-04-01
Lahars at volcanoes inundate surrounding areas and damage or destroy nearby communities. Unlike any other volcanic hazard, lahars do not require an eruption to occur. They can be triggered by bad weather or by edifice failure long after an eruption a timing that can worsen the hazard. Modeling of lahars has become an important tool in the assessment of the related hazards in order to undertake appropriate mitigation actions and reduce the associated risks. In January 22, 2001, a violent explosion occurred in the Popocatépetl volcano (México) and a pumice- rich pyroclastic flows were spread out over a distance of 7 Km. The remobilization of this deposit formed a lahar that flowed through Huiloac Gorge for as far 12 Km to the town of Santiago Xalizintla. In this paper, we used a depth integrated coupled mathematical model derived from the velocity-pressure of the Biot-Zienkiewicz model which was discretised using SPH method to simulate Popocatepetl 2001 lahar. In order to investigate the convergence of the model we use a range of different SPH mesh resolutions. Once the optimum mesh resolution is bounded we analyse the model sensitivity to initial lahar volume, the density of the geomaterial, and the rheological parameter of the Bingham fluid. The obtained results highlight the capability of the proposed model to replicate the propagation stage of such complex phenomena. Moreover, the paper shows the effects of SPH mesh resolution and the relevant role played by the rheological parameters. Keywords: Numerical modelling, SPH, fluidised geomaterial, lahar, Popocatépetl volcano.
FireStem2D A two-dimensional heat transfer model for simulating tree stem injury in fires
Efthalia K. Chatziefstratiou; Gil Bohrer; Anthony S. Bova; Ravishankar Subramanian; Renato P.M. Frasson; Amy Scherzer; Bret W. Butler; Matthew B. Dickinson
2013-01-01
FireStem2D, a software tool for predicting tree stem heating and injury in forest fires, is a physically-based, two-dimensional model of stem thermodynamics that results from heating at the bark surface. It builds on an earlier one-dimensional model (FireStem) and provides improved capabilities for predicting fire-induced mortality and injury before a fire occurs by...
Mosleh-Shirazi, Mohammad Amin; Zarrini-Monfared, Zinat; Karbasi, Sareh; Zamani, Ali
2014-01-01
Two-dimensional (2D) arrays of thick segmented scintillators are of interest as X-ray detectors for both 2D and 3D image-guided radiotherapy (IGRT). Their detection process involves ionizing radiation energy deposition followed by production and transport of optical photons. Only a very limited number of optical Monte Carlo simulation models exist, which has limited the number of modeling studies that have considered both stages of the detection process. We present ScintSim1, an in-house optical Monte Carlo simulation code for 2D arrays of scintillation crystals, developed in the MATLAB programming environment. The code was rewritten and revised based on an existing program for single-element detectors, with the additional capability to model 2D arrays of elements with configurable dimensions, material, etc., The code generates and follows each optical photon history through the detector element (and, in case of cross-talk, the surrounding ones) until it reaches a configurable receptor, or is attenuated. The new model was verified by testing against relevant theoretically known behaviors or quantities and the results of a validated single-element model. For both sets of comparisons, the discrepancies in the calculated quantities were all <1%. The results validate the accuracy of the new code, which is a useful tool in scintillation detector optimization. PMID:24600168
NASA Astrophysics Data System (ADS)
Zhang, Ning
This thesis presents the parasitic extraction and magnetic analysis for transformers, inductors, and IGBT bridge busbars with Maxwell 2D and Maxwell 3D simulation. In the first chapter, the magnetic field of a transformer in Maxwell 2D is analyzed. The parasitic capacitance between each winding of the transformer are extracted by Maxwell 2D. According to the actual dimensions, the parasitic capacitances are calculated. The results are verified by comparing with the measurement results from 4395A impedance analyzer. In the second chapter, two CM inductors are simulated in Maxwell 3D. One is the conventional winding inductor, the other one is the proposed one. The magnetic field distributions of different winding directions are analyzed. The analysis is verified by the simulation result. The last chapter introduces a technique to analyze, extract, and measure the parasitic inductance of planar busbars. With this technique, the relationship between self-inductance and mutual-inductance is analyzed. Secondly, a total inductance is calculated based on the developed technique. Thirdly, the current paths and the inductance on a planar busbar are investigated with DC-link capacitors. Furthermore, the analysis of the inductance is addressed. Ansys Q3D simulation and analysis are presented. Finally, the experimental verification is shown by the S-parameter measurement.
NASA Astrophysics Data System (ADS)
Chen, T.; Wang, P.; Fehler, M.; Zhang, Y.; Burns, D.
2009-12-01
Localizing subsurface fractures and estimating their mechanical parameters and geometric properties are very important in oil and gas industry as well as geothermal energy research. It is essential to quantitatively understand how the elastic wave propagation is affected by these fractures. In this paper, an analytical expression for the scattered P- and SV waves from a 2D fracture is formulated based on a normal mode method, where the 2D fracture is modeled by a low-aspect ratio elliptical cylinder. The scatter function of this 2D fracture are expressed in terms of the incident angle, the orientation and aspect ratio of the fracture as well as the elastic impedance contrast between the surrounding medium and the inhomogeneity inside the fracture. Results from this analytical solution match well with those from a finite-difference approach. Solutions of this analytical model at two limiting cases (a circular cylinder with aspect ratio equal to one and a strip with aspect ratio equal to zero) are also compared to analytical solutions directly derived for the circular cylinder and strip by other studies.
NASA Astrophysics Data System (ADS)
Magri, F.; Inbar, N.; Raggad, M.; Möller, S.; Siebert, C.; Möller, P.; Kuehn, M.
2014-12-01
Lake Kinneret (Lake Tiberias or Sea of Galilee) is the most important freshwater reservoir in the Northern Jordan Valley. Simulations that couple fluid flow, heat and mass transport are built to understand the mechanisms responsible for the salinization of this important resource. Here the effects of permeability distribution on 2D and 3D convective patterns are compared. 2D simulations indicate that thermal brine in Haon and some springs in the Yamourk Gorge (YG) are the result of mixed convection, i.e. the interaction between the regional flow from the bordering heights and thermally-driven flow (Magri et al., 2014). Calibration of the calculated temperature profiles suggests that the faults in Haon and the YG provides paths for ascending hot waters, whereas the fault in the Golan recirculates water between 1 and 2 km depths. At higher depths, faults induce 2D layered convection in the surrounding units. The 2D assumption for a faulted basin can oversimplify the system, and the conclusions might not be fully correct. The 3D results also point to mixed convection as the main mechanism for the thermal anomalies. However, in 3D the convective structures are more complex allowing for longer flow paths and residence times. In the fault planes, hydrothermal convection develops in a finger regime enhancing inflow and outflow of heat in the system. Hot springs can form locally at the surface along the fault trace. By contrast, the layered cells extending from the faults into the surrounding sediments are preserved and are similar to those simulated in 2D. The results are consistent with the theory from Zhao et al. (2003), which predicts that 2D and 3D patterns have the same probability to develop given the permeability and temperature ranges encountered in geothermal fields. The 3D approach has to be preferred to the 2D in order to capture all patterns of convective flow, particularly in the case of planar high permeability regions such as faults. Magri, F., et al., 2014
Yan, Chang; Yuan, Rongfeng; Pfalzgraff, William C.; Nishida, Jun; Wang, Lu; Markland, Thomas E.; Fayer, Michael D.
2016-01-01
Functionalized self-assembled monolayers (SAMs) are the focus of ongoing investigations because they can be chemically tuned to control their structure and dynamics for a wide variety of applications, including electrochemistry, catalysis, and as models of biological interfaces. Here we combine reflection 2D infrared vibrational echo spectroscopy (R-2D IR) and molecular dynamics simulations to determine the relationship between the structures of functionalized alkanethiol SAMs on gold surfaces and their underlying molecular motions on timescales of tens to hundreds of picoseconds. We find that at higher head group density, the monolayers have more disorder in the alkyl chain packing and faster dynamics. The dynamics of alkanethiol SAMs on gold are much slower than the dynamics of alkylsiloxane SAMs on silica. Using the simulations, we assess how the different molecular motions of the alkyl chain monolayers give rise to the dynamics observed in the experiments. PMID:27044113
Leblanc, M D; Whitehead, J P; Plumer, M L
2013-05-15
A combination of Metropolis and modified Wolff cluster algorithms is used to examine the impact of uniaxial single-ion anisotropy on the phase transition to ferromagnetic order of Heisenberg macrospins on a 2D square lattice. This forms the basis of a model for granular perpendicular recording media where macrospins represent the magnetic moment of grains. The focus of this work is on the interplay between anisotropy D, intragrain exchange J' and intergrain exchange J on the ordering temperature T(C) and extends our previous reported analysis of the granular Ising model. The role of intragrain degrees of freedom in heat assisted magnetic recording is discussed.
NASA Astrophysics Data System (ADS)
Leblanc, M. D.; Whitehead, J. P.; Plumer, M. L.
2013-05-01
A combination of Metropolis and modified Wolff cluster algorithms is used to examine the impact of uniaxial single-ion anisotropy on the phase transition to ferromagnetic order of Heisenberg macrospins on a 2D square lattice. This forms the basis of a model for granular perpendicular recording media where macrospins represent the magnetic moment of grains. The focus of this work is on the interplay between anisotropy D, intragrain exchange J‧ and intergrain exchange J on the ordering temperature TC and extends our previous reported analysis of the granular Ising model. The role of intragrain degrees of freedom in heat assisted magnetic recording is discussed.
NASA Technical Reports Server (NTRS)
Tao, W.-K.; Shie, C.-H.; Simpson, J.; Starr, D.; Johnson, D.; Sud, Y.
2003-01-01
Real clouds and clouds systems are inherently three dimensional (3D). Because of the limitations in computer resources, however, most cloud-resolving models (CRMs) today are still two-dimensional (2D). A few 3D CRMs have been used to study the response of clouds to large-scale forcing. In these 3D simulations, the model domain was small, and the integration time was 6 hours. Only recently have 3D experiments been performed for multi-day periods for tropical cloud system with large horizontal domains at the National Center for Atmospheric Research. The results indicate that surface precipitation and latent heating profiles are very similar between the 2D and 3D simulations of these same cases. The reason for the strong similarity between the 2D and 3D CRM simulations is that the observed large-scale advective tendencies of potential temperature, water vapor mixing ratio, and horizontal momentum were used as the main forcing in both the 2D and 3D models. Interestingly, the 2D and 3D versions of the CRM used in CSU and U.K. Met Office showed significant differences in the rainfall and cloud statistics for three ARM cases. The major objectives of this project are to calculate and axamine: (1)the surface energy and water budgets, (2) the precipitation processes in the convective and stratiform regions, (3) the cloud upward and downward mass fluxes in the convective and stratiform regions; (4) cloud characteristics such as size, updraft intensity and lifetime, and (5) the entrainment and detrainment rates associated with clouds and cloud systems that developed in TOGA COARE, GATE, SCSMEX, ARM and KWAJEX. Of special note is that the analyzed (model generated) data sets are all produced by the same current version of the GCE model, i.e. consistent model physics and configurations. Trajectory analyse and inert tracer calculation will be conducted to identify the differences and similarities in the organization of convection between simulated 2D and 3D cloud systems.
Marouane, H; Shirazi-Adl, A; Adouni, M
2017-04-01
Musculoskeletal models of the lower extremity make a number of important assumptions when attempting to estimate muscle forces and tibiofemoral compartmental loads in activities such as gait. The knee is commonly idealized as a planar 2D joint in the sagittal plane with no consideration of motions and equilibrium in remaining planes. With muscle forces predicted, the static equilibrium in the frontal plane is then used to estimate compartmental loads neglecting also joint passive resistance and assuming condylar contact centers. We aimed here to comprehensively investigate the effects of such assumptions on predicted results. While simulating gait and using a hybrid lower extremity model that incorporates a detailed validated 3D finite element model of the knee joint, analyses are repeated with out-of-sagittal plane rotations and moment equilibrium equations neglected (2D model) and tibial compartmental forces estimated using equilibrium in the frontal plane while disregarding passive resistance and assuming fixed contact centers (1D model). Large unbalanced out-of-sagittal plane moments reaching peaks of 30 Nm abduction moment and 12 Nm internal moment at 25 % stance period are computed that are overlooked in the 2D model. Consideration of the knee as a planar 2D joint substantially diminishes muscle forces, anterior cruciate ligament force and tibiofemoral contact forces/stresses when compared to the 3D reference model. Total tibiofemoral contact force peaks at 25 % stance at 4.2 BW in the 3D model that drops to 3.0 BW in the 2D model. The location of contact centers on each plateau also noticeably alters (by as much as 5 mm). Tibiofemoral contact forces further change when the location of contact centers on each plateau is fixed. Results highlight the importance of accurate simulation of 3D motions and equilibrium equations as well as passive joint properties and contact centers.
NASA Astrophysics Data System (ADS)
Ito, Y.; Noborio, K.
2015-12-01
In Japan, soil disinfection with hot water has been popular since the use of methyl bromide was restricted in 2005. Decreasing the amount of hot water applied may make farmers reduce the operation cost. To determine the appropriate amount of hot water needed for soil disinfection, HYDRUS-2D was evaluated. A field experiment was conducted and soil water content and soil temperature were measured at 5, 10, 20, 40, 60, 80 and 100 cm deep when 95oC hot water was applied. Irrigation tubing equipped with drippers every 30 cm were laid at the soil surface, z=0 cm. An irrigation rate for each dripper was 0.83 cm min-1 between t=0 and 120 min, and thereafter it was zero. Temperature of irrigation water was 95oC. Total simulation time with HYDRUS-2D was 720 min for a homogeneous soil. A simulating domain was selected as x=60 cm and z=100 cm. A potential evaporation rate was assumed to be 0 cm min-1 because the soil surface was covered with a plastic sheet. The boundary condition at the bottom was free drainage and those of both sides were no-flux conditions. Hydraulic properties and bulk densities measured at each depth were used for simulation. It was assumed that there was no organic matter contained. Soil thermal properties were adopted from previous study and HYDRUS 2D. Simulated temperatures at 5, 10, 20 and 40 cm deep agreed well with those measured although simulated temperatures at 60, 80, and 100 cm deep were overly estimated. Estimates of volumetric water content at 5 cm deep agreed well with measured values. Simulated values at 10 to 100 cm deep were overly estimated by 0.1 to 0.3 (m3 m-3). The deeper the soil became, the more the simulated wetting front lagged behind the measured one. It was speculated that water viscosity estimated smaller at high temperature might attributed to the slower advances of wetting front simulated with HYDRUS 2-D.
SPH and Material Failure: Progress Report
Owen, J M
2005-04-12
Smoothed Particle Hydrodynamics (SPH) is a meshless Lagrangian technique for modeling hydrodynamics, and as such offers some unique advantages when applied to problems of material failure and breakup. The two most important of these advantages are: (1) SPH is Lagrangian and robust--i.e., it is never necessary to advect or remap. Damage models typically involve a number of complex history variables (such as the damage associated with the Lagrangian mass, crack orientations, etc.), and advecting these quantities as is required in a mesh based algorithm is a very challenging problem. (2) SPH allows the Lagrangian points to move about, reconnect, or separate as dictated by the material flow. This naturally allows for the points to move apart as distinct fragments of material form, resulting in gaps or cracks between the fragments. Typically mesh based algorithms represent the ''cracks'' between fragments as zones of failed material, which is quite different than allowing voids devoid of material to form.
NASA Astrophysics Data System (ADS)
Kim, Kyeong-Hyeon; Kim, Dong-Su; Kim, Tae-Ho; Kang, Seong-Hee; Cho, Min-Seok; Suh, Tae Suk
2015-11-01
The phantom-alignment error is one of the factors affecting delivery quality assurance (QA) accuracy in intensity-modulated radiation therapy (IMRT). Accordingly, a possibility of inadequate use of spatial information in gamma evaluation may exist for patient-specific IMRT QA. The influence of the phantom-alignment error on gamma evaluation can be demonstrated experimentally by using the gamma passing rate and the gamma value. However, such experimental methods have a limitation regarding the intrinsic verification of the influence of the phantom set-up error because experimentally measuring the phantom-alignment error accurately is impossible. To overcome this limitation, we aimed to verify the effect of the phantom set-up error within the gamma evaluation formula by using a Monte Carlo simulation. Artificial phantom set-up errors were simulated, and the concept of the true point (TP) was used to represent the actual coordinates of the measurement point for the mathematical modeling of these effects on the gamma. Using dose distributions acquired from the Monte Carlo simulation, performed gamma evaluations in 2D and 3D. The results of the gamma evaluations and the dose difference at the TP were classified to verify the degrees of dose reflection at the TP. The 2D and the 3D gamma errors were defined by comparing gamma values between the case of the imposed phantom set-up error and the TP in order to investigate the effect of the set-up error on the gamma value. According to the results for gamma errors, the 3D gamma evaluation reflected the dose at the TP better than the 2D one. Moreover, the gamma passing rates were higher for 3D than for 2D, as is widely known. Thus, the 3D gamma evaluation can increase the precision of patient-specific IMRT QA by applying stringent acceptance criteria and setting a reasonable action level for the 3D gamma passing rate.
NASA Astrophysics Data System (ADS)
Schäfer, M.; Groos, L.; Forbriger, T.; Bohlen, T.
2014-09-01
Full-waveform inversion (FWI) of shallow-seismic surface waves is able to reconstruct lateral variations of subsurface elastic properties. Line-source simulation for point-source data is required when applying algorithms of 2-D adjoint FWI to recorded shallow-seismic field data. The equivalent line-source response for point-source data can be obtained by convolving the waveforms with √{t^{-1}} (t: traveltime), which produces a phase shift of π/4. Subsequently an amplitude correction must be applied. In this work we recommend to scale the seismograms with √{2 r v_ph} at small receiver offsets r, where vph is the phase velocity, and gradually shift to applying a √{t^{-1}} time-domain taper and scaling the waveforms with r√{2} for larger receiver offsets r. We call this the hybrid transformation which is adapted for direct body and Rayleigh waves and demonstrate its outstanding performance on a 2-D heterogeneous structure. The fit of the phases as well as the amplitudes for all shot locations and components (vertical and radial) is excellent with respect to the reference line-source data. An approach for 1-D media based on Fourier-Bessel integral transformation generates strong artefacts for waves produced by 2-D structures. The theoretical background for both approaches is presented in a companion contribution. In the current contribution we study their performance when applied to waves propagating in a significantly 2-D-heterogeneous structure. We calculate synthetic seismograms for 2-D structure for line sources as well as point sources. Line-source simulations obtained from the point-source seismograms through different approaches are then compared to the corresponding line-source reference waveforms. Although being derived by approximation the hybrid transformation performs excellently except for explicitly back-scattered waves. In reconstruction tests we further invert point-source synthetic seismograms by a 2-D FWI to subsurface structure and evaluate
Park, Gwan Cheol; Jung, Jin-A; Bae, Kyun-Seop; Lim, Hyeong-Seok
2017-09-01
Some prospective, randomized clinical trials, including ATAC and BIG 1-98, demonstrated superior treatment effect of third-generation aromatase inhibitors (AIs) versus tamoxifen in postoperative therapy for patients with breast cancer. In retrospective genotyping analyses of the 2 studies using tumor samples, no difference in the treatment effect of tamoxifen was observed by CYP2D6 genotypes. However, those analyses did not consider loss of heterozygosity that could have occurred when genotyping using tumor tissue. The present simulation study aimed to comparatively evaluate the treatment effect of tamoxifen versus AIs of anastrozole and letrozole by CYP2D6 genotypes. A meta-analysis was conducted to estimate disease-free survival (DFS) hazard ratios of CYP2D6 genotypes representing extensive metabolizers (EMs), HRW/W,TAM , versus intermediate metabolizers (IMs)/poor metabolizers (PMs), HRV/W,TAM , using previous study results in which genotypes were determined using blood samples. Based on known allele frequencies, the CYP2D6 genotype distribution of participants in ATAC and BIG 1-98 trials were simulated. Subsequently, DFS HRs of AIs versus tamoxifen by CYP2D6 genotypes (HRAI/TAM,W for EMs, HRAI/TAM,V for IMs/PMs) were estimated via regression analyses using NONMEM, based on the simulated genotype distributions, HRV/W,TAM , and HRs, of AIs versus tamoxifen (HRAI/TAM ) reported in the ATAC and BIG 1-98 trials. Median HRAI/TAM,V (95% prediction interval [PI]) was 0.43 (0.23-0.79) and 0.40 (0.22-0.73) for the ATAC and BIG 1-98 trials, respectively. However, the corresponding HRAI/TAM,W values were 0.97 (0.84-1.11) and 0.91 (0.77-1.08), respectively. These results suggest that in patients with the CYP2D6 genotype representing EMs, the treatment effect of tamoxifen is comparable to that of AIs. © 2017, The American College of Clinical Pharmacology.
Huang, Chenhua; Yang, Xiangbo; He, Zhihong
2010-06-01
In this paper, based on the evolutionary Monte Carlo (EMC) algorithm, we have made four points of ameliorations and propose a so-called genetic algorithm based on optimal secondary structure (GAOSS) method to predict efficiently the protein folding conformations in the two-dimensional hydrophobic-hydrophilic (2D HP) model. Nine benchmarks are tested to verify the effectiveness of the proposed approach and the results show that for the listed benchmarks GAOSS can find the best solutions so far. It means that reasonable, effective and compact secondary structures (SSs) can avoid blind searches and can reduce time consuming significantly. On the other hand, as examples, we discuss the diversity of protein GSC for the 24-mer and 85-mer sequences. Several GSCs have been found by GAOSS and some of the conformations are quite different from each other. It would be useful for the designing of protein molecules. GAOSS would be an efficient tool for the protein structure predictions (PSP).
NASA Astrophysics Data System (ADS)
Hallo, L.; Olazabal-Loumé, M.; Maire, P. H.; Breil, J.; Morse, R.-L.; Schurtz, G.
2006-06-01
This paper deals with ablation front instabilities simulations in the context of direct drive ICF. A simplified DT target, representative of realistic target on LIL is considered. We describe here two numerical approaches: the linear perturbation method using the perturbation codes Perle (planar) and Pansy (spherical) and the direct simulation method using our Bi-dimensional hydrodynamic code Chic. Numerical solutions are shown to converge, in good agreement with analytical models.
NASA Astrophysics Data System (ADS)
Wu, C.; Chang, T.
2010-12-01
A new method in describing the multifractal characteristics of intermittent events was introduced by Cheng and Wu [Chang T. and Wu C.C., Physical Rev, E77, 045401(R), 2008]. The procedure provides a natural connection between the rank-ordered spectrum and the idea of one-parameter scaling for monofractals. This technique has been demonstrated using results obtained from a 2D MHD simulation. It has also been successfully applied to in-situ solar wind observations [Chang T., Wu, C.C. and Podesta, J., AIP Conf Proc. 1039, 75, 2008], and the broadband electric field oscillations from the auroral zone [Tam, S.W.Y. et al., Physical Rev, E81, 036414, 2010]. We take the next step in this procedure. By using the ROMA spectra and the scaled probability distribution functions (PDFs), raw PDFs can be calculated, which can be compared directly with PDFs from observations or simulation results. In addition to 2D MHD simulation results and in-situ solar wind observation, we show clearly using the ROMA analysis the multifractal character of the 3D fluid simulation data obtained from the JHU turbulence database cluster at http://turbulence.pha.jhu.edu. In particular, we show the scaling of the non-symmetrical PDF for the parallel-velocity fluctuations of this 3D fluid data.
A 2D Array of 100's of Ions for Quantum Simulation and Many-Body Physics in a Penning Trap
NASA Astrophysics Data System (ADS)
Bohnet, Justin; Sawyer, Brian; Britton, Joseph; Bollinger, John
2015-05-01
Quantum simulations promise to reveal new materials and phenomena for experimental study, but few systems have demonstrated the capability to control ensembles in which quantum effects cannot be directly computed. One possible platform for intractable quantum simulations may be a system of 100's of 9Be+ ions in a Penning trap, where the valence electron spins are coupled with an effective Ising interaction in a 2D geometry. Here we report on results from a new Penning trap designed for 2D quantum simulations. We characterize the ion crystal stability and describe progress towards bench-marking quantum effects of the spin-spin coupling using a spin-squeezing witness. We also report on the successful photodissociation of BeH+ contaminant molecular ions that impede the use of such crystals for quantum simulation. This work lays the foundation for future experiments such as the observation of spin dynamics under the quantum Ising Hamiltonian with a transverse field. Supported by a NIST-NRC Research Associateship.
NASA Astrophysics Data System (ADS)
Croes, Vivien; Lafleur, Trevor; Bonaventura, Zdenek; Péchereau, François; Bourdon, Anne; Chabert, Pascal
2016-09-01
This work studies the electron-cyclotron instability in Hall-Effect Thrusters (HETs) using a 2D Particle-In-Cell (PIC) simulation. The simulation is configured with a Cartesian coordinate system where a magnetic field, B0, is aligned along the X-axis (radial direction, including absorbing walls), a constant electric field, E0, along the Z-axis (axial direction, perpendicular to simulation plane), and the E0xB0 direction along the Y-axis (O direction, with periodic boundaries). Although for low plasma densities classical electron-neutral collisions theory describes well electron transport, at sufficiently high densities (as measured in HETs) a strong instability can be observed that enhances the electron mobility, even in the absence of collisions. The instability generates high frequency ( MHz) and short wavelength ( mm) fluctuations in both the electric field and charged particle densities. We investigate the correlation between these fluctuations and their role with anomalous electron transport; complementing previous 1D simulations. Plasma is self-consistently heated by the instability, but since the latter does not reach saturation in an infinitely long 2D system, saturation is achieved through implementation of a finite axial length that models convection in E0 direction. With support of Safran Aircraft Engines.
NASA Astrophysics Data System (ADS)
Wendling, A.; Daniel, J. L.; Hivet, G.; Vidal-Sallé, E.; Boisse, P.
2015-12-01
Numerical simulation is a powerful tool to predict the mechanical behavior and the feasibility of composite parts. Among the available numerical approaches, as far as woven reinforced composites are concerned, 3D finite element simulation at the mesoscopic scale leads to a good compromise between realism and complexity. At this scale, the fibrous reinforcement is modeled by an interlacement of yarns assumed to be homogeneous that have to be accurately represented. Among the numerous issues induced by these simulations, the first one consists in providing a representative meshed geometrical model of the unit cell at the mesoscopic scale. The second one consists in enabling a fast data input in the finite element software (contacts definition, boundary conditions, elements reorientation, etc.) so as to obtain results within reasonable time. Based on parameterized 3D CAD modeling tool of unit-cells of dry fabrics already developed, this paper presents an efficient strategy which permits an automated meshing of the models with 3D hexahedral elements and to accelerate of several orders of magnitude the simulation data input. Finally, the overall modeling strategy is illustrated by examples of finite element simulation of the mechanical behavior of fabrics.
NASA Astrophysics Data System (ADS)
Boukenkoul, M. A.; Li, F. C.; Aounallah, M.
2017-03-01
The present study aims to investigate numerically the flow control possibility using a synthetic jet actuation over a bi-dimensional NACA0015 airfoil manoeuvring at a highly turbulent flow (8.9e105 Reynolds to chord number). The 2-D flow behaviour was computed using the ANSYS Fluent commercial code. The so-called Reynolds Averaged Navier-Stocks (RANS) approach has been tested for one (Spalat-Allmaras S-A) and two (K-ε) transport equations for the turbulence modelling. Both present a weakness to predict the stall angle effectively. The S-A lift coefficient slope seems to be the closest to the experimental data. The synthetic jet control exhibits an extraordinary lift coefficient enhancement at high Angles Of Attack (AOA) but seems to be less obvious at low AOA, where the flow is still attached. A synthetic jet of a Strouhal (St = 2) and momentum (Cμ of 0.56%), delays the stall onset from 15 to 19deg with enhancing the lift coefficient by 40%. The actual work has been enriched by studying the effect of the jet’s frequency and momentum on the lift temporal signal. Also, the interaction between the mean flow and the synthetic jet structures topology was undertaken.
NASA Technical Reports Server (NTRS)
Scalapino, D. J.; Sugar, R. L.; White, S. R.; Bickers, N. E.; Scalettar, R. T.
1989-01-01
Numerical simulations on the half-filled three-dimensional Hubbard model clearly show the onset of Neel order. Simulations of the two-dimensional electron-phonon Holstein model show the competition between the formation of a Peierls-CDW state and a superconducting state. However, the behavior of the partly filled two-dimensional Hubbard model is more difficult to determine. At half-filling, the antiferromagnetic correlations grow as T is reduced. Doping away from half-filling suppresses these correlations, and it is found that there is a weak attractive pairing interaction in the d-wave channel. However, the strength of the pair field susceptibility is weak at the temperatures and lattice sizes that have been simulated, and the nature of the low-temperature state of the nearly half-filled Hubbard model remains open.
NASA Technical Reports Server (NTRS)
Scalapino, D. J.; Sugar, R. L.; White, S. R.; Bickers, N. E.; Scalettar, R. T.
1989-01-01
Numerical simulations on the half-filled three-dimensional Hubbard model clearly show the onset of Neel order. Simulations of the two-dimensional electron-phonon Holstein model show the competition between the formation of a Peierls-CDW state and a superconducting state. However, the behavior of the partly filled two-dimensional Hubbard model is more difficult to determine. At half-filling, the antiferromagnetic correlations grow as T is reduced. Doping away from half-filling suppresses these correlations, and it is found that there is a weak attractive pairing interaction in the d-wave channel. However, the strength of the pair field susceptibility is weak at the temperatures and lattice sizes that have been simulated, and the nature of the low-temperature state of the nearly half-filled Hubbard model remains open.
NASA Astrophysics Data System (ADS)
Kononenko, O.; Lopes, N. C.; Cole, J. M.; Kamperidis, C.; Mangles, S. P. D.; Najmudin, Z.; Osterhoff, J.; Poder, K.; Rusby, D.; Symes, D. R.; Warwick, J.; Wood, J. C.; Palmer, C. A. J.
2016-09-01
In this work, two-dimensional (2D) hydrodynamic simulations of a variable length gas cell were performed using the open source fluid code OpenFOAM. The gas cell was designed to study controlled injection of electrons into a laser-driven wakefield at the Astra Gemini laser facility. The target consists of two compartments: an accelerator and an injector section connected via an aperture. A sharp transition between the peak and plateau density regions in the injector and accelerator compartments, respectively, was observed in simulations with various inlet pressures. The fluid simulations indicate that the length of the down-ramp connecting the sections depends on the aperture diameter, as does the density drop outside the entrance and the exit cones. Further studies showed, that increasing the inlet pressure leads to turbulence and strong fluctuations in density along the axial profile during target filling, and consequently, is expected to negatively impact the accelerator stability.
Fan, D.; Geng, C.; Chen, L.Q.
1997-03-01
The local kinetics and topological phenomena during normal grain growth were studied in two dimensions by computer simulations employing a continuum diffuse-interface field model. The relationships between topological class and individual grain growth kinetics were examined, and compared with results obtained previously from analytical theories, experimental results and Monte Carlo simulations. It was shown that both the grain-size and grain-shape (side) distributions are time-invariant and the linear relationship between the mean radii of individual grains and topological class n was reproduced. The moments of the shape distribution were determined, and the differences among the data from soap froth. Potts model and the present simulation were discussed. In the limit when the grain size goes to zero, the average number of grain edges per grain is shown to be between 4 and 5, implying the direct vanishing of 4- and 5-sided grains, which seems to be consistent with recent experimental observations on thin films. Based on the simulation results, the conditions for the applicability of the familiar Mullins-Von Neumann law and the Hillert`s equation were discussed.
Lin, Yiguang; Nassif, Najah T.; McGowan, Eileen M.
2017-01-01
The various sphingosine kinase (SphK) isoenzymes (isozymes) and isoforms, key players in normal cellular physiology, are strongly implicated in cancer and other diseases. Mutations in SphKs, that may justify abnormal physiological function, have not been recorded. Nonetheless, there is a large and growing body of evidence demonstrating the contribution of gain or loss of function and the imbalance in the SphK/S1P rheostat to a plethora of pathological conditions including cancer, diabetes and inflammatory diseases. SphK is expressed as two isozymes SphK1 and SphK2, transcribed from genes located on different chromosomes and both isozymes catalyze the phosphorylation of sphingosine to S1P. Expression of each SphK isozyme produces alternately spliced isoforms. In recent years the importance of the contribution of SpK1 expression to treatment resistance in cancer has been highlighted and, additionally, differences in treatment outcome appear to also be dependent upon SphK isoform expression. This review focuses on an exciting emerging area of research involving SphKs functions, expression and subcellular localization, highlighting the complexity of targeting SphK in cancer and also comorbid diseases. This review also covers the SphK isoenzymes and isoforms from a historical perspective, from their first discovery in murine species and then in humans, their role(s) in normal cellular function and in disease processes, to advancement of SphK as an oncotarget. PMID:28415564
Hatoum, Diana; Haddadi, Nahal; Lin, Yiguang; Nassif, Najah T; McGowan, Eileen M
2017-05-30
The various sphingosine kinase (SphK) isoenzymes (isozymes) and isoforms, key players in normal cellular physiology, are strongly implicated in cancer and other diseases. Mutations in SphKs, that may justify abnormal physiological function, have not been recorded. Nonetheless, there is a large and growing body of evidence demonstrating the contribution of gain or loss of function and the imbalance in the SphK/S1P rheostat to a plethora of pathological conditions including cancer, diabetes and inflammatory diseases. SphK is expressed as two isozymes SphK1 and SphK2, transcribed from genes located on different chromosomes and both isozymes catalyze the phosphorylation of sphingosine to S1P. Expression of each SphK isozyme produces alternately spliced isoforms. In recent years the importance of the contribution of SpK1 expression to treatment resistance in cancer has been highlighted and, additionally, differences in treatment outcome appear to also be dependent upon SphK isoform expression. This review focuses on an exciting emerging area of research involving SphKs functions, expression and subcellular localization, highlighting the complexity of targeting SphK in cancer and also comorbid diseases. This review also covers the SphK isoenzymes and isoforms from a historical perspective, from their first discovery in murine species and then in humans, their role(s) in normal cellular function and in disease processes, to advancement of SphK as an oncotarget.
NASA Astrophysics Data System (ADS)
Chen, B.; Yang, D.; Meneveau, C. V.; Chamecki, M.
2016-12-01
As oil plumes from deep-water blowouts reach the ocean mixed layer (OML), they experience considerable horizontal and vertical dilution due to the action of Langmuir turbulence, submesoscale eddies and Ekman transport. Previous studies using large-eddy simulation (LES) have shown that Langmuir turbulence can impact the transport direction, lateral diffusion and geometry of surface oil plume, depending on the size of oil droplets. However, the large range of relevant length scales, from submesoscale eddies down to small-scale 3D Langmuir turbulence, makes it challenging to accurately reproduce the long-term evolution of oil plumes in the upper ocean using conventional large-eddy simulation strategies. The extended nonperiodic domain large-eddy simulation for scalars (ENDLESS) is a new technique developed as a multi-scale approach to simulate long-term oil plume dispersion at a reasonable computational cost. The basic idea is to simulate Langmuir turbulence on a LES domain with a small but sufficient horizontal domain size to capture the essential physics of the flow field, while simulating the oil plume evolution over an effectively horizontally extended large domain. Moreover, this ENDLESS method permits the superposition of large-scale quasi-2D ocean eddies on the oil advection, allowing for coupling with regional ocean circulation models. Using this new numerical tool, the effects of the interactions between 3D turbulence and 2D eddies on the flow field and on oil dispersion are elucidated by comparing the results from ENDLESS with those from conventional LES. This research was made possible by a grant from The Gulf of Mexico Research Initiative.
Peterson, D.L.; Bowers, R.L.; Lebeda, C.F.; Matuska, W.; Benage, J.; Idzorek, G.; Oona, H.; Stokes, J.; Roderick, N.F.
1995-09-01
Two experiments, PegI-41, conducted on the Los Alamos Pegasus I capacitor bank, and PegII-25, on the Pegasus II bank, consisted of the implosions of 13 mg (nominal), 5 cm radius, 2 cm high thin cylindrical aluminum foils resulting in soft x-ray radiation pulses from the plasma thermalization on axis. The implosions were conducted in direct-drive (no intermediate switching) mode with peak currents of about 4 MA and 5 MA respectively, and implosion times of about 2.5 {micro}s and 2.0 {micro}s. A radiation yield of about 250 kJ was measured for PegII-25. The purpose of these experiments was to examine the physics of the implosion and relate this physics to the production of the radiation pulse and to provide detailed experimental data which could be compared with 2-D radiation-magnetohydrodynamic (RMHD) simulations. Included in the experimental diagnostic suites were faraday rotation and dB/dt current measurements, a visible framing camera, an x-ray stripline camera, time-dependent spectroscopy, bolometers and XRD`S. A comparison of the results from these experiments shows agreement with 2-D simulation results in the instability development, current, and radiation pulse data, including the pulsewidth, shape, peak power and total radiation yield as measured by bolometry. Instabilities dominate the behavior of the implosion and largely determine the properties of the resulting radiation pulse. The 2-D simulations can be seen to be an important tool in understanding the implosion physics.
NASA Astrophysics Data System (ADS)
Fares, A.; Simunek, J.; Parsons, L. R.; van Genuchten, T. M.; Wheaton, T. A.; Morgan, K. T.
2001-12-01
Citrus root systems are exposed to different thermal and hydrologic conditions as a result of tree canopy shading and undertree microirrigation. Because microsprinklers wet only part of the soil surface and are located under the tree, roots under the canopy usually receive more water than those outside the tree canopy. The combined effects of different soil temperature and water input on water redistribution under field conditions have not been fully studied in Florida sandy soils. The objective of this study was to investigate shading and irrigation effects on spatial distribution of water content and soil temperature at different soil depths. Real-time capacitance probe systems (EnviroSCAN, SENTEK, Ltd. South Australia) and thermocouples were used to monitor soil water content and temperature at depths of 0, 10, 20, 40, 80 and 150 cm. Weather parameters were monitored simultaneously at the same location. HYDRUS-2D, a two dimensional computer package for simulating movement of water, heat, and multiple solutes in variably saturated media, was used to simulate water flow and heat transport under such conditions. The predicted water contents and soil temperatures compared favorably with their corresponding observed parameters. Shading substantially influenced hydraulic and thermal regimes of the system as shown by both predicted and measured water content and soil temperature. In addition to its accuracy in simulating this system, HYDRUS-2D helped to improve the analysis of this research project.
NASA Astrophysics Data System (ADS)
Sengupta, M.; Ganesh, R.
2017-03-01
In this paper, we have investigated, through simulation, the process of destabilization of a cylindrically confined electron cloud due to the presence of a single species of neutral atoms, Ar in the background of the trap at a pressure relevant to experiments. The destabilization occurs because of a gradual accumulation of Ar+ in the cloud by the electron-impact ionization of the background neutrals. The trapped ions gradually collectively form a sizeable ion cloud which engages in a rotational two-stream instability (the ion resonance instability) with the electron cloud. The instability excites a growing fundamental diocotron mode on both components of the mixed non-neutral cloud. With the help of a set of numerical diagnostics, we have investigated the nonlinear evolution of the excited fundamental mode under the combined influence of two ongoing processes viz, (i) the changing electron and ion populations caused by electron impact ionization of the background Ar, and also by the radial loss of both charged species to the grounded trap wall at later stages and (ii) the elastic scattering of electrons and ions that make non-ionizing collisions with the background neutrals. The 2D collisionless dynamics of the instability has been simulated using a 2D Particle-in-Cell code operating on a Cartesian grid laid out on the cylindrical trap's cross-section, and the 3D ionizing and non-ionizing collisions between charged particles and background neutrals have been simulated using the technique of Monte-Carlo-Collisions.
Simulation of FT-IR spectra and 2D-COS analysis for the H/D exchange of two related ligands
NASA Astrophysics Data System (ADS)
Iloro, Ibon; Pastrana-Rios, Belinda
2006-11-01
Two-dimensional IR correlation spectroscopy (2D-COS) is a relatively novel method that provides the analysis of infrared spectra with the capacity to differentiate overlapping peaks and to distinguish between in-phase and out-of-phase spectral responses. The technique is becoming popular for protein dynamic studies, like H/D exchange attenuated total reflectance Fourier transform-infrared (ATR-FT-IR) spectroscopy. The use of this technique provides the capability to resolve the dynamic molecular events that occur upon H → D exchange of accessible amide protons and exchangeable protons within side chain (Arg, Tyr) that are commonly overlapped. The value of the use of simulated spectra to generate the 2D-COS plots is that it allows for confirmation of the existence of the auto-peaks and its correlations. Because of this, we have employed the use of simulated spectra originated from backbone vibrational contributions such as amide I, I', II and II' bands for a case study presented herein. Intensity, bandwidth, and band position were the parameters used to study their variation in the correlation plots during a typical H/D exchange ATR-FT-IR experiment. These simulations are compared with experimental spectral data from ATR-FT-IR analysis in order to separate the backbone contribution from the highly overlapped side chain contributions (mainly Arg and Tyr).
Huang, Haibing; Lv, Jun; Bao, Yameng; Xuan, Rongwei; Sun, Shenghua; Sneck, Sami; Li, Shuo; Modanese, Chiara; Savin, Hele; Wang, Aihua; Zhao, Jianhua
2017-04-01
This data article is related to our recently published article ('20.8% industrial PERC solar cell: ALD Al2O3 rear surface passivation, efficiency loss mechanisms analysis and roadmap to 24%', Huang et al., 2017 [1]) where we have presented a systematic evaluation of the overall cell processing and a cost-efficient industrial roadmap for PERC cells. Aside from the information already presented in Huang et al., 2017 [1], here we provide data related to Sectin 3 in Huang et al., 2017 [1] concerning the analysis of the recombination losses׳ mechanisms by PC1D V5.9 and PC2D simulations (Clugston and Basore, 1997, Basore and Cabanas-Holmen, 2011, Cabanas-Holmen and Basore, 2012 and Cabanas-Holmen and Basore, 2012.) [2], [3], [4], [5] on our current industrial Al2O3 PERC cell. The data include: i) PC2D simulations on J02, ii) the calculation of series resistance and back surface recombination velocity (BSRV) on the rear side metallization of PERC cell for the case of a point contact, and iii) the PC1D simulation on the cumulative photo-generation and recombination along the distance from the front surface. Finally, the roadmap of the solar cell efficiency for an industrial PERC technology up to 24% is presented, with the aim of providing a potential guideline for industrial researchers.
Qian, A R; Li, D; Han, J; Gao, X; Di, S M; Zhang, W; Hu, L F; Shang, Peng
2012-05-01
Osteoblasts, the bone-forming cells, respond to various mechanical forces, such as stretch and fluid shear force in essentially similar ways. The cytoskeleton, as the load-bearing architecture of the cell, is sensitive to altered inertial forces. Disruption of the cytoskeleton will result in alteration of cellular structure and function. However, it is difficult to quantitatively illustrate cytoskeletal rearrangement because of the complexity of cytoskeletal structure. Usually, the morphological changes in actin organization caused by external stimulus are basically descriptive. In this study, fractal dimensions (D) analysis was used to quantify the morphological changes in the actin cytoskeleton of osteoblast-like cells (MC3T3-E1) under simulated microgravity using 3-D/2-D clinostats. The ImageJ software was used to count the fractal dimension of actin cytoskeleton by box-counting methods. Real-time PCR and immunofluroscent assays were used to further confirm the results obtained by fractal dimension analysis. The results showed significant decreases in D value of actin cytoskeleton, β-actin mRNA expression, and the mean fluorescence intensity of F-actin in osteoblast-like cells after 24 or 48 h of incubation under 3-D/2-D clinorotation condition compared with control. The findings indicate that 3-D/2-D clinorotation affects both actin cytoskeleton architecture and mRNA expression, and fractal may be a promising approach for quantitative analysis of the changes in cytoskeleton in different environments.
Numerical simulation of far field acoustics of an airfoil using vortex method and 2-D FW-H equation
NASA Astrophysics Data System (ADS)
Jia, S. H.; Yang, B.; Zhao, X. L.; Xu, J. Z.
2013-12-01
Airfoil self noise is the main noise source of large wind turbine blades and aircraft wings. Unsteady flow field of NACA0012 airfoil has been simulated numerically in this paper using vortex method, and validation has also been done. Far field acoustics of circular cylinder at Reynolds number equals 150, 200 and 2000 have been simulated and validated numerically in this paper, as unsteady load of target object being acoustic source. The result of far field acoustics of circular cylinder shows that the maximum sound pressure points are in the line perpendicular to the coming flow, which is consistent with other papers. And comparison with paper about NACA0012 airfoil at Re=200 shows that the directivity is in a good agreement. Work of this paper paves the way to further investigation of acoustics prediction of wind turbine blades.
Numerical modelling of propagation of landslides using SPH
NASA Astrophysics Data System (ADS)
Montull, Carlos; Pastor, Manuel; Springman, Sarah
2015-04-01
Landslides cause severe economic damage and a large number of casualties every year around the world. Engineers and geologists need to understand and predict their properties, such as velocity, depth and run out distance. In addition to experience gained on similar cases, predictions require the application of mathematical, constitutive/rheological and numerical models. Different models are currently used to simulate long run-out landslides in order to elaborate hazard maps. Among the available alternatives, depth integrated models present a reasonable compromise between computational cost and accuracy. The purpose of this paper is to apply the SPH depth integrated model, together with suitable rheological laws, to analize fast landslides. We will present the results obtained with the code Geoflow_SPH to three selected cases: (i) The Frank avalanche, (ii) the Cougar Hill flowslide and (iii) the Sham Tseng debris flow. The results of the simulations include estimations of fundamental aspects of the problem, such as the path followed by the sliding mass, the shape of the run-out area, the maximum run-out, the depth of the final deposit, the pore pressure evolution and the speed evolution of the landslide.
Roux, Emmanuel; Ramalli, Alessandro; Tortoli, Piero; Cachard, Christian; Robini, Marc; Liebgott, Herve
2016-08-24
Full matrix arrays are excellent tools for 3D ultrasound imaging, but the required number of active elements is too high to be individually controlled by an equal number of scanner channels. The number of active elements is significantly reduced by the sparse array techniques, but the position of the remaining elements must be carefully optimized. This issue is here faced by introducing novel energy functions in the simulated annealing algorithm. At each iteration step of the optimization process, one element is freely translated and the associated radiated pattern is simulated. To control the pressure field behavior at multiple depths, three energy functions inspired by the pressure field radiated by a Blackman-tapered spiral array are introduced. Such energy functions aim at limiting the main lobe width while lowering the side lobe and grating lobe levels at multiple depths. Numerical optimization results illustrate the influence of the number of iterations, pressure measurement points and depths as well as the influence of the energy function definition on the optimized layout. It is also shown that performance close to- or even better than the one provided by a spiral array, here assumed as reference, may be obtained. The finite-time convergence properties of simulated annealing allow the duration of the optimization process to be set in advance.
Plane-dependent ML scatter scaling: 3D extension of the 2D simulated single scatter (SSS) estimate
NASA Astrophysics Data System (ADS)
Rezaei, Ahmadreza; Salvo, Koen; Vahle, Thomas; Panin, Vladimir; Casey, Michael; Boada, Fernando; Defrise, Michel; Nuyts, Johan
2017-08-01
Scatter correction is typically done using a simulation of the single scatter, which is then scaled to account for multiple scatters and other possible model mismatches. This scaling factor is determined by fitting the simulated scatter sinogram to the measured sinogram, using only counts measured along LORs that do not intersect the patient body, i.e. ‘scatter-tails’. Extending previous work, we propose to scale the scatter with a plane dependent factor, which is determined as an additional unknown in the maximum likelihood (ML) reconstructions, using counts in the entire sinogram rather than only the ‘scatter-tails’. The ML-scaled scatter estimates are validated using a Monte-Carlo simulation of a NEMA-like phantom, a phantom scan with typical contrast ratios of a 68Ga-PSMA scan, and 23 whole-body 18F-FDG patient scans. On average, we observe a 12.2% change in the total amount of tracer activity of the MLEM reconstructions of our whole-body patient database when the proposed ML scatter scales are used. Furthermore, reconstructions using the ML-scaled scatter estimates are found to eliminate the typical ‘halo’ artifacts that are often observed in the vicinity of high focal uptake regions.
NASA Astrophysics Data System (ADS)
Amaya-Ventura, Gilberto; Rodríguez-Romo, Suemi
2011-09-01
This paper deals with the computational simulation of the reaction-diffusion-advection phenomena emerging in Rayleigh-Bénard (RB) and Poiseuille-Bénard reactive convection systems. We use the Boussinesq's approximation for buoyancy forces and the Lattice Boltzmann method (LBM). The first kinetic mesoscopic model proposed here is based on the discrete Boltzmann equation needed to solve the momentum balance coupled with buoyancy forces. Then, a second lattice Boltzmann algorithm is applied to solve the reaction-diffusion-advection equation to calculate the evolution of the chemical species concentration. We use a reactive system composed by nitrous oxide (so call laughing gas) in air as an example; its spatio-temporal decomposition is calculated. Two cases are considered, a rectangular enclosed cavity and an open channel. The simulations are performed at low Reynolds numbers and in a steady state between the first and second thermo-hydrodynamic instabilities. The results presented here, for the thermo-hydrodynamic behavior, are in good agreement with experimental data; while our| chemical kinetics simulation yields expected results. Some applications of our approach are related to chemical reactors and atmospheric phenomena, among others.
NASA Astrophysics Data System (ADS)
Uchino, H.; Machida, S.
2012-12-01
A physical process of the substorm triggering in the Earth's Magnetotail is thought to be closely related to the magnetic reconnection and the tearing instability. Recently we proposed a new scheme of the substorm onset called "Catapult Current Sheet Relaxation (CCSR) Model " to physically understand the results from GEOTAIL and THEMIS data. The CCSR Model has characters that are the decrease of the total pressure and thinning of the current sheet at the distance about -12Re in the magnetotail a few minutes before the substorm onset, and the simultaneous occurrence of the dipolarization at X~-10Re and the magnetic reconnection at X~-20Re at the time of the onset. In this study, we investigate a stability of the current sheet and the particle acceleration via particle simulation in order to assess the validity of the CCSR model and to clarify the mechanism of substorm onset. We give an initial magnetic field structure which is akin to the Earth's dipole magnetic field together with a stretched magnetic field by thin current sheet, and further add a weak northward magnetic field at the place where Near-Earth Neutral Line is expected to be formed. The results of simulation contain similar features that characterize the CCSR Model. A physically interpretation of the simulation result with the linear instability theory as well as comparison with observations will be given.
On the accuracy of simulations of a 2D boundary layer with RANS models implemented in OpenFoam
NASA Astrophysics Data System (ADS)
Graves, Benjamin J.; Gomez, Sebastian; Poroseva, Svetlana V.
2013-11-01
The OpenFoam software is an attractive Computational Fluid Dynamics solver for evaluating new turbulence models due to the open-source nature, and the suite of existing standard model implementations. Before interpreting results obtained with a new model, a baseline for performance of the OpenFoam solver and existing models is required. In the current study we analyze the RANS models in the OpenFoam incompressible solver for two planar (two-dimensional mean flow) benchmark cases generated by the AIAA Turbulence Model Benchmarking Working Group (TMBWG): a zero-pressure-gradient flat plate and a bump-in-channel. The OpenFoam results are compared against both experimental data and simulation results obtained with the NASA CFD codes CFL3D and FUN3D. Sensitivity of simulation results to the grid resolution and model implementation are analyzed. Testing is conducted using the Spalart-Allmaras one-equation model, Wilcox's two-equation k-omega model, and the Launder-Reece-Rodi Reynolds-stress model. Simulations using both wall functions and wall-resolved (low Reynolds number) formulations are considered. The material is based upon work supported by NASA under award NNX12AJ61A.
2D hybrid simulations of super-diffusion at the magnetopause driven by Kelvin-Helmholtz instability
Cowee, Misa M; Winske, Dan; Gary, S Peter
2009-01-01
This manuscript describes the self-consistent simulation of diffusion at the magnetopause driven by Kelvin-Helmholtz (KH) instability. Two-dimensional hybrid (kinetic ions, fluid electrons) simulations of the most KH-unstable configuration where the shear flow is oriented perpendicular to the uniform magnetic field are carried out. The motion of the simulation particles are tracked during the run and their mean-square displacement normal to the magnetopause is calculated from which diffusion coefficients are determined. The diffusion coefficients are found to be time dependent, with D{sub x} {proportional_to} t{sup {alpha}}, where {alpha} > 1. Additionally, the probability distribution functions (PDF) of the 'jump lengths' the particles make over time are found to be non-gaussian. Such time-dependent diffusion coefficients and non-gaussian PDF's have been associated with so-called 'super-diffusion', in which diffusive mixing of particles is enhanced over classical diffusion. The results indicate that while turbulence associated with the break-down of vortices contributes to this enhanced diffusion, it is the growth of large-scale, coherent vortices is the more important process in facilitating it.
NASA Astrophysics Data System (ADS)
Matos, J. R.; Welty, C.; Packman, A.
2005-12-01
The main purpose of the simulations in this research is the analysis of three-dimensional surface-groundwater interchange in heterogeneous systems. The effects of channel pattern, bed forms and aquifer heterogeneity on flow interactions between stream and groundwater systems are examined in order to contribute for a better understanding of the hyporheic process. A two-dimensional approach was also adopted to allow comparisons with the three-dimensional results. The grid was designed using the correlation scales of the heterogeneous fields and the scale of the stream meanders. MODFLOW and MODPATH were used to evaluate magnitude, direction and spatial distribution of the exchange flow. PMWIN and PMPATH were used as pre and post-processors during the construction of the models and analysis of results. Gaining and losing streams as well as parallel flow and flow across streams were simulated as idealized cases intended to describe how properties of the streambed and aquifer in low-gradient lowland streams contribute to hyporheic exchange. At first a straight river was analyzed then meandering streams were created with a sine curve and variations on wavelength and amplitude. Bed forms were simulated assuming a sinusoidal distribution of pressure head in the bed surface. Aspects of the influence of bedforms on mechanisms such as "pumping" and "turnover" are expected to be addressed with simulations. Flow velocities between 20 and 40 cm/s in the channel were tested with the objective of showing the influence of river morphology and natural bed forms on the flow exchange in the hyporheic zone. Several meander cycles and four levels of hydraulic conductivity variance were analyzed. Results of flow variances along the cross-sections and wetted perimeter show the increasing on hyporheic exchange as the degree of heterogeneity increases. Particle tracking was performed to define hyporheic residence time distributions. When comparing the homogeneous fields with all degrees of
NASA Astrophysics Data System (ADS)
Valdarnini, R.
2016-11-01
In this paper, we present results from a series of hydrodynamical tests aimed at validating the performance of a smoothed particle hydrodynamics (SPH) formulation in which gradients are derived from an integral approach. We specifically investigate the code behavior with subsonic flows, where it is well known that zeroth-order inconsistencies present in standard SPH make it particularly problematic to correctly model the fluid dynamics. In particular, we consider the Gresho-Chan vortex problem, the growth of Kelvin-Helmholtz instabilities, the statistics of driven subsonic turbulence and the cold Keplerian disk problem. We compare simulation results for the different tests with those obtained, for the same initial conditions, using standard SPH. We also compare the results with the corresponding ones obtained previously with other numerical methods, such as codes based on a moving-mesh scheme or Godunov-type Lagrangian meshless methods. We quantify code performances by introducing error norms and spectral properties of the particle distribution, in a way similar to what was done in other works. We find that the new SPH formulation exhibits strongly reduced gradient errors and outperforms standard SPH in all of the tests considered. In fact, in terms of accuracy, we find good agreement between the simulation results of the new scheme and those produced using other recently proposed numerical schemes. These findings suggest that the proposed method can be successfully applied for many astrophysical problems in which the presence of subsonic flows previously limited the use of SPH, with the new scheme now being competitive in these regimes with other numerical methods.
Vogel; Rossler
2000-11-01
By carrying out random walk simulations we systematically study the effects of various types of complex molecular dynamics on (2)H NMR experiments in solids. More precisely, we calculate one-dimensional (1D) (2)H NMR spectra and the results of two dimensional (2D) (2)H NMR experiments in time domain, taking into account isotropic as well as highly restricted motions which involve rotational jumps about different finite angles. Although the dynamical models are chosen to mimic the primary and secondary relaxation in supercooled liquids and glasses, we do not intend to describe experimental results quantitatively but rather to show general effects appearing for complex reorientations. We carefully investigate whether 2D (2)H NMR in time domain, which was originally designed to measure correlation times of ultraslow motions (tau >/= 1 ms), can be used to obtain shorter tau, too. It is demonstrated that an extension of the time window to tau >/= 10 &mgr;s is possible when dealing with exponential relaxation, but that it will fail if there is a distribution of correlation times G(lgtau). Vice versa, we show that 1D (2)H NMR spectra, usually recorded to look at dynamics with tau in the microsecond regime, are also applicable for studying ultraslow motions provided that the loss of correlation is achieved step by step. Therefore, it is useful to carry out 1D and 2D NMR experiments simultaneously in order to reveal the mechanism of complex molecular motions. In addition, we demonstrate that highly restricted dynamics can be clearly observed in 1D spectra and in 2D NMR in time domain if long solid-echo delays and large evolution times are applied, respectively. Finally, unexpected observations are described which appear in the latter experiment when considering very broad distributions G(lgtau). Because of these effects, time scale and geometry of a considered motion cannot be extracted from a straightforward analysis of experimental results. Copyright 2000 Academic Press.
NASA Astrophysics Data System (ADS)
Yang, Z.; Lembege, B.; Lu, Q.
2012-04-01
Both hybrid/full particle simulations and recent experimental results have clearly evidenced that the front of a supercritical quasi-perpendicular shock can be rippled. Recent two-dimensional simulations have focussed on two different types of shock front rippling: (1) one characterized by a small spatial scale along the front is supported by lower hybrid wave activity, (2) the other characterized by a large spatial scale along the front is supported by the emission of large amplitude nonlinear whistler waves. These two rippled shock fronts are observed self-consistently respectively when the static magnetic field is perpendicular to (so called "B0-OUT" case) or within (so called "B0-IN" case) the simulation plane. "B0-OUT" and "B0-IN" cases are respectively characterized by a small and large rippling scale along the shock front. On the other hand, several studies have been made on the reflection and energization of incoming ions with a shock but most have been restricted to a one dimensional shock profile only (no rippling effects). Herein, two-dimensional test particle simulations based on strictly perpendicular shock profiles produced in two-dimensional PIC simulations are performed in order to investigate the impact of the shock front ripples on incident ion (H+) dynamics. The acceleration mechanisms and energy spectra of the test-ions (described by shell distributions with different initial kinetic energy) interacting with a rippled shock front are analyzed in detail. Both "B0-OUT" and "B0-IN" cases are considered separately; in each case, y-averaged (front rippling excluded) and non-averaged (front rippling included) profiles will be analyzed. Present results show that: (1) the incident ions suffer both shock drift acceleration (SDA) and shock surfing acceleration (SSA) mechanisms. Moreover, a striking feature is that SSA ions not only are identified at the ramp but also within the foot which confirms previous 1-D simulation results; (2) the percentage of SSA
Schaffranek, Raymond W.
2004-01-01
A numerical model for simulation of surface-water integrated flow and transport in two (horizontal-space) dimensions is documented. The model solves vertically integrated forms of the equations of mass and momentum conservation and solute transport equations for heat, salt, and constituent fluxes. An equation of state for salt balance directly couples solution of the hydrodynamic and transport equations to account for the horizontal density gradient effects of salt concentrations on flow. The model can be used to simulate the hydrodynamics, transport, and water quality of well-mixed bodies of water, such as estuaries, coastal seas, harbors, lakes, rivers, and inland waterways. The finite-difference model can be applied to geographical areas bounded by any combination of closed land or open water boundaries. The simulation program accounts for sources of internal discharges (such as tributary rivers or hydraulic outfalls), tidal flats, islands, dams, and movable flow barriers or sluices. Water-quality computations can treat reactive and (or) conservative constituents simultaneously. Input requirements include bathymetric and topographic data defining land-surface elevations, time-varying water level or flow conditions at open boundaries, and hydraulic coefficients. Optional input includes the geometry of hydraulic barriers and constituent concentrations at open boundaries. Time-dependent water level, flow, and constituent-concentration data are required for model calibration and verification. Model output consists of printed reports and digital files of numerical results in forms suitable for postprocessing by graphical software programs and (or) scientific visualization packages. The model is compatible with most mainframe, workstation, mini- and micro-computer operating systems and FORTRAN compilers. This report defines the mathematical formulation and computational features of the model, explains the solution technique and related model constraints, describes the
2D/3D quench simulation using ANSYS for epoxy impregnated Nb3Sn high field magnets
Ryuji Yamada et al.
2002-09-19
A quench program using ANSYS is developed for the high field collider magnet for three-dimensional analysis. Its computational procedure is explained. The quench program is applied to a one meter Nb{sub 3}Sn high field model magnet, which is epoxy impregnated. The quench simulation program is used to estimate the temperature and mechanical stress inside the coil as well as over the whole magnet. It is concluded that for the one meter magnet with the presented cross section and configuration, the thermal effects due to the quench is tolerable. But we need much more quench study and improvements in the design for longer magnets.
Simulation of Ultra-Small MOSFETs Using a 2-D Quantum-Corrected Drift-Diffusion Model
NASA Technical Reports Server (NTRS)
Biegel, Bryan A.; Rafferty, Conor S.; Yu, Zhiping; Dutton, Robert W.; Ancona, Mario G.; Saini, Subhash (Technical Monitor)
1998-01-01
We describe an electronic transport model and an implementation approach that respond to the challenges of device modeling for gigascale integration. We use the density-gradient (DG) transport model, which adds tunneling and quantum smoothing of carrier density profiles to the drift-diffusion model. We present the current implementation of the DG model in PROPHET, a partial differential equation solver developed by Lucent Technologies. This implementation approach permits rapid development and enhancement of models, as well as run-time modifications and model switching. We show that even in typical bulk transport devices such as P-N diodes and BJTs, DG quantum effects can significantly modify the I-V characteristics. Quantum effects are shown to be even more significant in small, surface transport devices, such as sub-0.1 micron MOSFETs. In thin-oxide MOS capacitors, we find that quantum effects may reduce gate capacitance by 25% or more. The inclusion of quantum effects in simulations dramatically improves the match between C-V simulations and measurements. Significant quantum corrections also occur in the I-V characteristics of short-channel MOSFETs due to the gate capacitance correction.
Roux, Emmanuel; Ramalli, Alessandro; Tortoli, Piero; Cachard, Christian; Robini, Marc C; Liebgott, Herve
2016-12-01
Full matrix arrays are excellent tools for 3-D ultrasound imaging, but the required number of active elements is too high to be individually controlled by an equal number of scanner channels. The number of active elements is significantly reduced by the sparse array techniques, but the position of the remaining elements must be carefully optimized. This issue is faced here by introducing novel energy functions in the simulated annealing (SA) algorithm. At each iteration step of the optimization process, one element is freely translated and the associated radiated pattern is simulated. To control the pressure field behavior at multiple depths, three energy functions inspired by the pressure field radiated by a Blackman-tapered spiral array are introduced. Such energy functions aim at limiting the main lobe width while lowering the side lobe and grating lobe levels at multiple depths. Numerical optimization results illustrate the influence of the number of iterations, pressure measurement points, and depths, as well as the influence of the energy function definition on the optimized layout. It is also shown that performance close to or even better than the one provided by a spiral array, here assumed as reference, may be obtained. The finite-time convergence properties of SA allow the duration of the optimization process to be set in advance.
NASA Astrophysics Data System (ADS)
Bi, Zhenhua; Xu, Xiang; Liu, Yongxin; Jiang, Xiangzhan; Lu, Wenqi; Wang, Younian
2011-04-01
A two-dimensional hybrid simulation scheme is proposed to study the characteristics of dual-frequency (DF) capacitively coupled plasma (CCP) discharge based on the geometry of real device. Given the experimental parameters for argon plasma, the output from the fluid module such as ion density, number flux, electron temperature and the Monte-Carlo collision (MCC) results of ion energy distribution function (IEDF) as well as electron energy distribution function (EEDF) are obtained and discussed in detail. A novel complete floating double probe is designed to measure both density and temperature of electron and a quadrupole mass spectrometer is also equipped for IEDF investigations. The measurements on the density of bulk plasma, electron temperature and IEDF agree well, qualitatively, with the simulated results. A comparison with experimental results indicates that, since the structure of real device is taken into account, this model is capable of describing the global dynamic characteristics occurred in DF-CCP and presenting more reliable results than the model with an ideal chamber structure.
NASA Astrophysics Data System (ADS)
Suryanarayanan, Saikishan; Narasimha, Roddam
2017-02-01
Although the free-shear or mixing layer has been a subject of extensive research over nearly a century, there are certain fundamental issues that remain controversial. These include the influence of initial and downstream conditions on the flow, the effect of velocity ratio across the layer, and the nature of any possible coupling between small scale dynamics and the large scale evolution of layer thickness. In the spirit of the temporal vortex-gas simulations of Suryanarayanan et al. ["Free turbulent shear layer in a point vortex gas as a problem in nonequilibrium statistical mechanics," Phys. Rev. E 89, 013009 (2014)], we revisit the simple 2D inviscid vortex-gas model with extensive computations and detailed analysis, in order to gain insights into some of the above issues. Simulations of the spatially evolving vortex-gas shear layer are carried out at different velocity ratios using a computational model based on the work of Basu et al. ["Vortex sheet simulation of a plane canonical mixing layer," Comput. Fluids 21, 1-30 (1992) and "Modelling plane mixing layers using vortex points and sheets," Appl. Math. Modell. 19, 66-75 (1995)], but with a crucial improvement that ensures conservation of global circulation. The simulations show that the conditions imposed at the origin of the free shear layer and at the exit to the computational domain can affect flow evolution in their respective downstream and upstream neighbourhoods, the latter being particularly strong in the single stream limit. In between these neighbourhoods at the ends is a regime of universal self-preserving growth rate given by a universal function of velocity ratio. The computed growth rates are generally located within the scatter of experimental data on plane mixing layers and closely agree with recent high Reynolds number experiments and 3D large eddy simulation studies. These findings support the view that observed free-shear layer growth can be largely explained by the 2D vortex dynamics of
NASA Astrophysics Data System (ADS)
Guillemaut, C.; Pitts, R. A.; Kukushkin, A. S.; Gunn, J. P.; Bucalossi, J.; Arnoux, G.; Belo, P.; Brezinsek, S.; Brix, M.; Corrigan, G.; Devaux, S.; Flanagan, J.; Groth, M.; Harting, D.; Huber, A.; Jachmich, S.; Kruezi, U.; Lehnen, M.; Marchetto, C.; Marsen, S.; Meigs, A. G.; Meyer, O.; Stamp, M.; Strachan, J. D.; Wiesen, S.; Wischmeier, M.; EFDA Contributors, JET
2014-09-01
The EDGE2D-EIRENE code is applied for simulation of divertor detachment during matched density ramp experiments in high triangularity, L-mode plasmas in both JET-Carbon (JET-C) and JET-ITER-Like Wall (JET-ILW). The code runs without drifts and includes either C or Be as impurity, but not W, assuming that the W targets have been coated with Be via main chamber migration. The simulations reproduce reasonably well the observed particle flux detachment as density is raised in both JET-C and JET-ILW experiments and can better match the experimental in-out divertor target power asymmetry if the heat flux entering the outer divertor is artificially set at around 2-3 times that entering the inner divertor. A careful comparison between different sets of atomic physics processes used in EIRENE shows that the detachment modelled by EDGE2D-EIRENE relies only on an increase of the particle sinks and not on a decrease of the ionization source. For the rollover and the beginning of the partially detached phase, the particle losses by perpendicular transport and the molecular activated recombination processes are mainly involved. For a deeper detachment with significant target ion flux reduction, volume recombination appears to be the main contributor. The elastic molecule-ion collisions are also important to provide good neutral confinement in the divertor and thus stabilize the simulations at low electron temperature (Te), when the sink terms are strong. Comparison between EDGE2D-EIRENE and SOLPS4.3 simulations of the density ramp in C shows similar detachment trends, but the importance of the elastic ion-molecule collisions is reduced in SOLPS4.3. Both codes suggest that any process capable of increasing the neutral confinement in the divertor should help to improve the modelling of the detachment. A further outcome of this work has been to demonstrate that key JET divertor diagnostic signals—Langmuir probe Te and bolometric tomographic reconstructions—are running beyond
Kasinathan, N.; Rajakumar, A.; Vaidyanathan, G.; Chetal, S.C.
1995-09-01
Post shutdown decay heat removal is an important safety requirement in any nuclear system. In order to improve the reliability of this function, Liquid metal (sodium) cooled fast breeder reactors (LMFBR) are equipped with redundant hot pool dipped immersion coolers connected to natural draught air cooled heat exchangers through intermediate sodium circuits. During decay heat removal, flow through the core, immersion cooler primary side and in the intermediate sodium circuits are also through natural convection. In order to establish the viability and validate computer codes used in making predictions, a 1:20 scale experimental model called RAMONA with water as coolant has been built and experimental simulation of decay heat removal situation has been performed at KfK Karlsruhe. Results of two such experiments have been compiled and published as benchmarks. This paper brings out the results of the numerical simulation of one of the benchmark case through a 1D/2D coupled code system, DHDYN-1D/THYC-2D and the salient features of the comparisons. Brief description of the formulations of the codes are also included.
NASA Astrophysics Data System (ADS)
de Garis, Hugo; Korkin, Michael; Guttikonda, Padma; Cooley, Donald
2000-11-01
This paper presents some simulation results of the evolution of 2D visual pattern recognizers to be implemented very shortly on real hardware, namely the 'CAM-Brain Machine' (CBM), an FPGA based piece of evolvable hardware which implements a genetic algorithm (GA) to evolve a 3D cellular automata (CA) based neural network circuit module, of approximately 1,000 neurons, in about a second, i.e. a complete run of a GA, with 10,000s of circuit growths and performance evaluations. Up to 65,000 of these modules, each of which is evolved with a humanly specified function, can be downloaded into a large RAM space, and interconnected according to humanly specified gvdvips -o SPIE-2000.ps SPIE-2000 artificial brain architectures. This RAM, containing an artificial brain with up to 75 million neurons, is then updated by the CBM at a rate of 130 billion CA cells per second. Such speeds will enable real time control of robots and hopefully the birth of a new research field that we call 'brain building.' The first such artificial brain, to be built at STARLAB in 2000 and beyond, will be used to control the behaviors of a life sized kitten robot called 'Robokitty.' This kitten robot will need 2D pattern recognizers in the visual section of its artificial brain. This paper presents simulation results on the evolvability and generalization properties of such recognizers.
NASA Astrophysics Data System (ADS)
Lawson, K. D.; Groth, M.; Belo, P.; Brezinsek, S.; Corrigan, G.; Czarnecka, A.; Delabie, E.; Drewelow, P.; Harting, D.; Książek, I.; Maggi, C. F.; Marchetto, C.; Meigs, A. G.; Menmuir, S.; Stamp, M. F.; Wiesen, S.
2015-08-01
A discrepancy in the divertor radiated powers between EDGE2D-EIRENE simulations, both with and without drifts, and JET-ILW experiments employing a set of NBI-heated L-mode discharges with step-wise density variation is investigated. Results from a VUV/visible poloidally scanning spectrometer are used together with bolometric measurements to determine the radiated power and its composition. The analysis shows the importance of D line radiation in contributing to the divertor radiated power, while contributions from D radiative recombination are smaller than expected. Simulations with W divertor plates underestimate the Be content in the divertor, since no allowance is made for Be previously deposited on the plates being re-eroded. An improved version of EDGE2D-EIRENE is used to test the importance of the deposited layer in which the sputtering yield from supposed pure Be divertor plates is reduced to match the spectroscopic signals, while keeping the sputtering yield for the Be main chamber walls unchanged.
NASA Technical Reports Server (NTRS)
Gnoffo, Peter A.; Berry, Scott A.; VanNorman, John W.
2011-01-01
This paper is one of a series of five papers in a special session organized by the NASA Fundamental Aeronautics Program that addresses uncertainty assessments for CFD simulations in hypersonic flow. Simulations of a shock emanating from a compression corner and interacting with a fully developed turbulent boundary layer are evaluated herein. Mission relevant conditions at Mach 7 and Mach 14 are defined for a pre-compression ramp of a scramjet powered vehicle. Three compression angles are defined, the smallest to avoid separation losses and the largest to force a separated flow engaging more complicated flow physics. The Baldwin-Lomax and the Cebeci-Smith algebraic models, the one-equation Spalart-Allmaras model with the Catrix-Aupoix compressibility modification and two-equation models including Menter SST, Wilcox k-omega 98, and Wilcox k-omega 06 turbulence models are evaluated. Each model is fully defined herein to preclude any ambiguity regarding model implementation. Comparisons are made to existing experimental data and Van Driest theory to provide preliminary assessment of model form uncertainty. A set of coarse grained uncertainty metrics are defined to capture essential differences among turbulence models. Except for the inability of algebraic models to converge for some separated flows there is no clearly superior model as judged by these metrics. A preliminary metric for the numerical component of uncertainty in shock-turbulent-boundary-layer interactions at compression corners sufficiently steep to cause separation is defined as 55%. This value is a median of differences with experimental data averaged for peak pressure and heating and for extent of separation captured in new, grid-converged solutions presented here. This value is consistent with existing results in a literature review of hypersonic shock-turbulent-boundary-layer interactions by Roy and Blottner and with more recent computations of MacLean.
NASA Astrophysics Data System (ADS)
Zhang, Wei; Chen, Chen; Jia, Rui; Janssen, G. J. M.; Zhang, Dai-Sheng; Xing, Zhao; Bronsveld, P. C. P.; Weeber, A. W.; Jin, Zhi; Liu, Xin-Yu
2013-07-01
In interdigitated back contact (IBC) solar cells, the metal-electrode coverage on a p-type emitter is optimized by a PC2D simulation. The result shows that the variation of the metal coverage ratio (MCR) will affect both the surface passivation and the electrode-contact properties for the p-type emitter in IBC solar cells. We find that when Rc ranges from 0.08 to 0.16Ω·cm2, the MCR is optimized with a value of 25% and 33%, resulting in a highest energy-conversion efficiency. The dependences of both Voc and fill factor on MCR are simulated in order to explore the mechanism of the IBC solar cells.
The effects of AGN feedback and SPH formulation on black hole growth in galaxies
NASA Astrophysics Data System (ADS)
Liu, MaoSheng; Di Matteo, Tiziana; Feng, Yu
2016-05-01
We perform simulations of isolated galaxies and major mergers to investigate the effects on black hole (BH) growth due to variations in active galactic nuclei (AGN) feedback models and different smooth particle hydrodynamic (SPH) solvers. In particular we examine density-SPH versus newer pressure-SPH formulation and their significance relative to minor changes in subgrid AGN feedback prescriptions. The aim is to use these idealized simulations to understand the impact of these effects for large cosmological volume simulations where these models are often adopted. In both isolated galaxies and galaxy mergers, we find that star formation histories are largely insensitive to the choice of SPH schemes whilst BH accretion rate can change. This can result in a factor of 2-3 difference in final BH mass for the two hydrodynamic formulations. However, the differences are much smaller than those obtained even with small changes in the subgrid AGN feedback prescription. In particular, depending on the size of the region and the manner in which the AGN energy is deposited, the star formation rate is suppressed by a factor of 2 in isolated galaxies and the star burst completely quenched during the coalescence of two galaxies. The final BH mass differs by over an order of magnitude by changes in AGN feedback model. Our results indicated that any change in the hydrodynamic formulation is likely subdominant to the effects of changing subgrid physics around the BH, although thermodynamic state and morphology of the gas remnant are also sensitive to the change in hydrodynamic solver.
Techniques utilized in the simulated altitude testing of a 2D-CD vectoring and reversing nozzle
NASA Technical Reports Server (NTRS)
Block, H. Bruce; Bryant, Lively; Dicus, John H.; Moore, Allan S.; Burns, Maureen E.; Solomon, Robert F.; Sheer, Irving
1988-01-01
Simulated altitude testing of a two-dimensional, convergent-divergent, thrust vectoring and reversing exhaust nozzle was accomplished. An important objective of this test was to develop test hardware and techniques to properly operate a vectoring and reversing nozzle within the confines of an altitude test facility. This report presents detailed information on the major test support systems utilized, the operational performance of the systems and the problems encountered, and test equipment improvements recommended for future tests. The most challenging support systems included the multi-axis thrust measurement system, vectored and reverse exhaust gas collection systems, and infrared temperature measurement systems used to evaluate and monitor the nozzle. The feasibility of testing a vectoring and reversing nozzle of this type in an altitude chamber was successfully demonstrated. Supporting systems performed as required. During reverser operation, engine exhaust gases were successfully captured and turned downstream. However, a small amount of exhaust gas spilled out the collector ducts' inlet openings when the reverser was opened more than 60 percent. The spillage did not affect engine or nozzle performance. The three infrared systems which viewed the nozzle through the exhaust collection system worked remarkably well considering the harsh environment.
NASA Astrophysics Data System (ADS)
Westerhof, E.; de Blank, H. J.; Pratt, J.
2016-03-01
Two dimensional reduced MHD simulations of neoclassical tearing mode growth and suppression by ECCD are performed. The perturbation of the bootstrap current density and the EC drive current density perturbation are assumed to be functions of the perturbed flux surfaces. In the case of ECCD, this implies that the applied power is flux surface averaged to obtain the EC driven current density distribution. The results are consistent with predictions from the generalized Rutherford equation using common expressions for Δ \\text{bs}\\prime and Δ \\text{ECCD}\\prime . These expressions are commonly perceived to describe only the effect on the tearing mode growth of the helical component of the respective current perturbation acting through the modification of Ohm’s law. Our results show that they describe in addition the effect of the poloidally averaged current density perturbation which acts through modification of the tearing mode stability index. Except for modulated ECCD, the largest contribution to the mode growth comes from this poloidally averaged current density perturbation.
Baryon acoustic oscillations in 2D. II. Redshift-space halo clustering in N-body simulations
NASA Astrophysics Data System (ADS)
Nishimichi, Takahiro; Taruya, Atsushi
2011-08-01
We measure the halo power spectrum in redshift space from cosmological N-body simulations, and test the analytical models of redshift distortions particularly focusing on the scales of baryon acoustic oscillations. Remarkably, the measured halo power spectrum in redshift space exhibits a large-scale enhancement in amplitude relative to the real-space clustering, and the effect becomes significant for the massive or highly biased halo samples. These findings cannot be simply explained by the so-called streaming model frequently used in the literature. By contrast, a physically motivated perturbation theory model developed in the previous paper reproduces the halo power spectrum very well, and the model combining a simple linear scale-dependent bias can accurately characterize the clustering anisotropies of halos in two dimensions, i.e., line-of-sight and its perpendicular directions. The results highlight the significance of nonlinear coupling between density and velocity fields associated with two competing effects of redshift distortions, i.e., Kaiser and Finger-of-God effects, and a proper account of this effect would be important in accurately characterizing the baryon acoustic oscillations in two dimensions.
Harris, R.A.; Archuleta, R.J. ); Day, S.M. )
1991-05-01
Fault steps may have controlled the sizes of the 1966 Parkfield, 1968 Borrego Mountain, 1979 Imperial Valley, 1979 Coyote Lake and the 1987 Superstition Hills earthquakes. This project investigates the effect of fault steps of various geometries on the dynamic rupture process. The authors have used a finite difference code to simulate spontaneous rupture propagation in two dimensions. They employ a slip-weakening fracture criterion as the condition for rupture propagation and examine how rupture on one plane initiates rupture on parallel fault planes. The geometry of the two parallel fault planes allows for stepover widths of 0.5 to 10.0 m and overlaps of {minus}5 to 5 km. Results demonstrate that the spontaneous rupture on the first fault segment continues to propagate onto the second fault segment for a range of geometries for both compressional and dilational fault steps. A major difference between the compressional and dilational cases is that a dilational step requires a longer time delay between the rupture front reaching the end of the first fault segment and initiating rupture on the second segment. Therefore this dynamic study implies that a compressional step will be jumped quickly, whereas a dilational step will cause a time delay leading to a lower apparent rupture velocity. The authors also find that the rupture is capable of jumping a wider dilational step than compressional step.
NASA Astrophysics Data System (ADS)
Nomeritae; Daly, Edoardo; Grimaldi, Stefania; Bui, Ha Hong
2016-11-01
Several numerical schemes are available to simulate fluid flow with Smoothed Particles Hydrodynamics (SPH). Although commonly experiencing pressure fluctuations, schemes allowing for small changes in fluid density, referred to as weakly compressible (WCSPH and δ-SPH), are often used because of their faster computational time when compared to implicit incompressible schemes (IISPH). Explicit numerical schemes for incompressible fluid flow (EISPH), although more computationally efficient than IISPH, have not been largely used in the literature. To explore advantages and disadvantages of EISPH, this study compared an EISPH scheme with WCSPH and δ-SPH. The three schemes were compared for the case of still water and a wave generated by a dam-break. EISPH and δ-SPH were also compared for the case of a dam-break wave colliding with a vertical wall and a dam-break wave flowing over a wet bed. The three schemes performed similarly in reproducing theoretical and experimental results. EISPH led to results overall similar to WCSPH and δ-SPH, but with smoother pressure dynamics and faster computational times. EISPH presented some errors in the imposition of incompressibility, with the divergence of velocity being different from zero in parts of the fluid flow, especially near the surface. These errors in the divergence of velocity were comparable to the values of velocity divergence obtained with δ-SPH. In an attempt to reduce the velocity divergence in EISPH, an iterative procedure was implemented to calculate the pressure (iterative-EISPH). Although no real improvement was achieved in terms of velocity divergence, the pressure thus calculated was smoother and in some cases was closer to measured experimental values.
SPH modelling of energy partitioning during impacts on Venus
NASA Technical Reports Server (NTRS)
Takata, T.; Ahrens, T. J.
1993-01-01
Impact cratering of the Venusian planetary surface by meteorites was investigated numerically using the Smoothed Particle Hydrodynamics (SPH) method. Venus presently has a dense atmosphere. Vigorous transfer of energy between impacting meteorites, the planetary surface, and the atmosphere is expected during impact events. The investigation concentrated on the effects of the atmosphere on energy partitioning and the flow of ejecta and gas. The SPH method is particularly suitable for studying complex motion, especially because of its ability to be extended to three dimensions. In our simulations, particles representing impactors and targets are initially set to a uniform density, and those of atmosphere are set to be in hydrostatic equilibrium. Target, impactor, and atmosphere are represented by 9800, 80, and 4200 particles, respectively. A Tillotson equation of state for granite is assumed for the target and impactor, and an ideal gas with constant specific heat ratio is used for the atmosphere. Two dimensional axisymmetric geometry was assumed and normal impacts of 10km diameter projectiles with velocities of 5, 10, 20, and 40 km/s, both with and without an atmosphere present were modeled.
NASA Astrophysics Data System (ADS)
Mathon, Christian; Kobayashi, Hiromi; Sedan, Olivier; Nachbaur, Aude; Dewez, Thomas; Berger, Frédéric; Des Garets, Emmanuel
2010-05-01
The Land Planning Authority of French Polynesia contracted BRGM to run a real-size rockfall experiment, called OFAI, in September 2009. The purposes of the experiments are two fold : first observe real-size rock trajectories in a context of variably weathered volcanic rock slopes; and second, use observed rockfall trajectories to calibrate block propagation models. 90 basalt blocks were dropped down a 150-m-long slope made of hard basalt veins, lenses of colluvium and erosion channels covered in blocks of various sizes. Parameters of the experiment concerned the shape (from nearly perfect sphere to elongated cubes) and mass of the blocks (from 300 kg to >5000 kg), and the launching point, in order to bounce the blocks both off stiff basalt veins and colluvium lenses. The data obtained from this real-size experiment were analyzed using two rockfall simulation models: a 2D model developed by the University of British Columbia, the Geological Survey of Canada and BRGM, and a 3D model which was developed from the 2D model, with the purpose of integrating the lateral dispersion of rockfalls. Both models are characterized by a 'hybrid approach' with a lumped mass assumption, taking indirectly the shape and rotational momentum of the block into account. Bouncing is simulated using soil restitution coefficients and plastic impact model (Falcetta, 1985). The input data are defined by probability density functions, thus allowing for both deterministic and probabilistic analysis. Usually calibrated with rare and punctual rockfall events, this recent experiment gave us a complete inventory of real 3D trajectories, associated with precise descriptions of the blocks (mass, shape) and accurate geomorphological characteristics of the impact points, so as to assess the performance of both models. The aims of the simulations were (i) comparing real trajectories to the simulated ones and evaluating their reliabilities (ii) calibrating material parameters for weathered volcanic
NASA Astrophysics Data System (ADS)
Bossy, Emmanuel; Talmant, Maryline; Laugier, Pascal
2002-07-01
In recent years, quantitative ultrasound (QUS) has played an increasing role in the assessment of bone status. The axial transmission technique allows to investigate skeletal sites such as the cortical layer of long bones (radius, tibia), inadequate to through-transmission techniques. Nevertheless, the type of propagation involved along bone specimens has not been clearly elucidated. Axial transmission is investigated here by means of two-dimensional simulations at 1 MHz. We focus our interest on the apparent speed of sound (SOS) of the first arriving signal (FAS). Its dependence on the thickness of the plate is discussed and compared to previous work. Different time criteria are used to derive the apparent SOS of the FAS as a function of source-receiver distance. Frequency-wave number analysis is performed in order to understand the type of propagation involved. For thick plates (thickness>lambdabone, longitudinal wavelength in bone), and for a limited range of source-receiver distances, the FAS corresponds to the lateral wave. Its velocity equals the longitudinal bulk velocity of the bone. For plate thickness less than lambdabone, some plate modes contribute to the FAS, and the apparent SOS decreases with the thickness in a way that depends on both the time criterion and on the source-receiver distance. The FAS corresponds neither to the lateral wave nor to a single plate mode. For very thin plates (thicknessbone)/4, the apparent SOS tends towards the velocity of the lowest order symmetrical vibration mode (S0 Lamb mode). copyright 2002 Acoustical Society of America.
NASA Astrophysics Data System (ADS)
Busse, Harald; Bublat, Martin; Ratering, Ralf; Rassek, Margarethe; Schwarzmaier, Hans-Joachim; Kahn, Thomas
2000-05-01
Minimally invasive techniques often require special biomedical monitoring schemes. In the case of laser coagulation of tumors accurate temperature mapping is desirable for therapy control. While magnetic resonance (MR)-based thermometry can easily yield qualitative results it is still difficult to calibrate this technique with independent temperature probes for the entire 2D field of view. Calculated temperature maps derived from Monte-Carlo simulations (MCS), on the other hand, are suitable for therapy planning and dosimetry but typically can not account for the extract individual tissue parameters and physiological changes upon heating. In this work, online thermometry was combined with MCS techniques to explore the feasibility and potential of such a biomodal approach for surgical assist systems. For the first time, the result of a 3D simulation were evaluated with MR techniques. An MR thermometry system was used to monitor the temperature evolution during laser-induced thermal treatment of bovine liver using a commercially available water-cooled applicator. A systematic comparison between MR-derived 2D temperature maps in different orientations and corresponding snapshots of a 3D MCS of the laser-induced processes is presented. The MCS is capable of resolving the complex temperature patterns observed in the MR-derived images and yields a good agreement with respect to absolute temperatures and damage volume dimensions. The observed quantitative agreement is around 10 degrees C and on the order of 10 percent, respectively. The integrated simulation-and-monitoring approach has the potential to improve surgical assistance during thermal interventions.
NASA Astrophysics Data System (ADS)
Constantinescu, R.; Thouret, J. C.; Sandri, L.; Irimus, I. A.; Stefanescu, R.
2012-04-01
Pyroclastic density currents, which include pyroclastic surges and pyroclastic flows (PFs), are among the most dangerous volcanic phenomena. We present a probabilistic hazard assessment of the PFs generated from eruptive column collapse at El Misti volcano (5822 m) in South Peru. The high relief of the cone, the location of the city of Arequipa (~1,000,000 people) on two large volcanoclastic fans and the H (3.5 km)/L (17 km) ratio (0.2) between the summit and the city center, make PFs a direct threat. We consider three eruption scenario sizes: small Vulcanian/Phreatomagmatic (VEI 2), medium Sub-Plinian (VEI 3-4), and large Plinian (VEI 4+). We use the Event-Tree approach in a Bayesian scheme with BET_VH (Bayesian Event Tree for Volcanic Hazard) software. Quantitative data that stem from numerical simulations from TITAN2D (termed prior models) and from stratigraphic record (termed past data) are input to BET_VH, which enables us to compute the probabilities (in a 1-year time window) of (i) having an eruption (ii) in a selected location/vent (iii) of a specific size, (iv) and that this eruption will produce PFs (v) that will reach a location of interest around El Misti. TITAN2D simulation runs, expressed as color-coded thicknesses of PDC deposits, fit well the extent of past PFs deposits, including thick confined deposits (0.5-7 m) in the Rio Chili canyon and its tributary ravines (Quebradas San Lazaro, Huarangal and Agua Salada).The unconfined, thinner (≤10cm) deposits, as displayed by simulation runs on the interfluves, is attributed to ash-cloud surges. Such thin, fine ash deposits have not been emphasized in geological maps either because they have been removed away or remain yet unrecognized. The simulated Vulcanian flows, restricted to the upper part of the cone, become confined (0.1-1m thick) in the ravines which converge towards each of the three Quebradas. The simulated Subplinian PF deposits reach 0.1 to 1 m thick in the Quebradas and 1-4 m WNW of El
NASA Astrophysics Data System (ADS)
Reddy, K. Sanjeeva; Krishnamurthy, C. V.; Balasubramaniam, Krishnan; Balasubramanian, T.
2010-02-01
This paper discusses the evaluation of diffracted signals from cracks in 2D based on a new Huygen-Fresnel Diffraction Model (H-FDM). The model employs the frequency-domain far-field displacement expressions derived by Miller & Pursey [1] in 2D for a line source located on the free surface of a semi-infinite elastic medium. At each frequency in the bandwidth of a pulsed excitation, the complex diffracted field is obtained by summing over the unblocked virtual sources located in the section containing a vertical crack. The time-domain diffracted signal is obtained using standard FFT procedures. The effect of beam refraction from a wedge-based finite transducer has been modeled by treating the finite transducer as an array of line sources. The model has been used for predicting diffracted signals in time-of-flight from the crack like defect. The model allows the evaluation of back wall signal amplitude and lateral wave amplitude as well. Experiments have been carried out on 10 mm thick aluminum sample with surface breaking crack of lengths 2 mm and 4 mm using shear probe shoe. The simulated A-Scan results for the aluminum sample with 2 mm and 4 mm surface breaking lengths compare very well in relative amplitudes and time of arrivals with experiments. The H-FDM model offers a tool to evaluate diffraction and related phenomena quantitatively with modest computational resources.
Sidler, Rolf; Carcione, José M.; Holliger, Klaus
2013-02-15
We present a novel numerical approach for the comprehensive, flexible, and accurate simulation of poro-elastic wave propagation in 2D polar coordinates. An important application of this method and its extensions will be the modeling of complex seismic wave phenomena in fluid-filled boreholes, which represents a major, and as of yet largely unresolved, computational problem in exploration geophysics. In view of this, we consider a numerical mesh, which can be arbitrarily heterogeneous, consisting of two or more concentric rings representing the fluid in the center and the surrounding porous medium. The spatial discretization is based on a Chebyshev expansion in the radial direction and a Fourier expansion in the azimuthal direction and a Runge–Kutta integration scheme for the time evolution. A domain decomposition method is used to match the fluid–solid boundary conditions based on the method of characteristics. This multi-domain approach allows for significant reductions of the number of grid points in the azimuthal direction for the inner grid domain and thus for corresponding increases of the time step and enhancements of computational efficiency. The viability and accuracy of the proposed method has been rigorously tested and verified through comparisons with analytical solutions as well as with the results obtained with a corresponding, previously published, and independently benchmarked solution for 2D Cartesian coordinates. Finally, the proposed numerical solution also satisfies the reciprocity theorem, which indicates that the inherent singularity associated with the origin of the polar coordinate system is adequately handled.
Influence of E{times}B and {nabla}{ital B} deift terms in 2-D edge/SOL transport simulations
Rognlien, T. D., LLNL
1998-05-15
Classical particle drifts across the magnetic field can play an important role in tokamak edge-plasma transport. The relative influence of these terms is studied for self-consistent simulations by including them, together with anomalous diffusion transport, in a 2-D fluid model of edge-plasma transport for the DIII-D tokamak geometry. The drifts cause asymmetries in the plasma equilibrium which depend on the direction of the magnetic field, B. The basic results can be understood by dividing the drifts into three categories: diamagnetic, E x B, and {nabla}B. The dominant effect near the divertor plates is from the E x B drifts, while the weaker {nabla}B drifts cause an increase in the magnitude of the radial electric field inside the magnetic separatrix. The diamagnetic terms, defined as divergence free, do not contribute to transport.
NASA Astrophysics Data System (ADS)
Gołebiowski, Jerzy; Bycul, Robert Piotr
2008-01-01
The non-stationary temperature distribution in a 2-D cross-section of a cylindrical copper wire with insulation was investigated. The wire was conducting direct current of a constant value. The Hankel boundary condition modelling convectional cooling was applied. The convective heat transfer coefficient was assumed to be a function of the angle coordinate in the cylindrical coordinate system. The heat transfer equation was discretized in space and time domain with the use of the implicit FDM. For each discrete value in the time domain the solution of the resulted system of algebraic equations was determined by a parallel conjugate gradient method. The results of the simulation were compared to those obtained from a commercial software package: EMRC Nisa. The comparison showed good agreement between the results. All the results and the comparison are presented in the paper along with the comments and conclusions.
NASA Astrophysics Data System (ADS)
Rank, Christopher M.; Heußer, Thorsten; Flach, Barbara; Brehm, Marcus; Kachelrieß, Marc
2015-03-01
We propose a new method for PET/MR respiratory motion compensation, which is based on a 3D-2D registration of strongly undersampled MR data and a) runs in parallel with the PET acquisition, b) can be interlaced with clinical MR sequences, and c) requires less than one minute of the total MR acquisition time per bed position. In our simulation study, we applied a 3D encoded radial stack-of-stars sampling scheme with 160 radial spokes per slice and an acquisition time of 38 s. Gated 4D MR images were reconstructed using a 4D iterative reconstruction algorithm. Based on these images, motion vector fields were estimated using our newly-developed 3D-2D registration framework. A 4D PET volume of a patient with eight hot lesions in the lungs and upper abdomen was simulated and MoCo 4D PET images were reconstructed based on the motion vector fields derived from MR. For evaluation, average SUVmean values of the artificial lesions were determined for a 3D, a gated 4D, a MoCo 4D and a reference (with ten-fold measurement time) gated 4D reconstruction. Compared to the reference, 3D reconstructions yielded an underestimation of SUVmean values due to motion blurring. In contrast, gated 4D reconstructions showed the highest variation of SUVmean due to low statistics. MoCo 4D reconstructions were only slightly affected by these two sources of uncertainty resulting in a significant visual and quantitative improvement in terms of SUVmean values. Whereas temporal resolution was comparable to the gated 4D images, signal-to-noise ratio and contrast-to-noise ratio were close to the 3D reconstructions.
NASA Astrophysics Data System (ADS)
Chong, Y. K.; Thornhill Giuliani, J. W., Jr.; Apruzese, J. P.; Terry, R. E.; Davis, J.
2001-10-01
The recent development of the computationally efficient tabulated collisional radiative equilibrium (TCRE) radiation transport model(J.W. Thornhill, J.P. Apruzese, J. Davis, R.W. Clark, A.L. Velikovich, J.L. Giuliani, Jr., Y.K. Chong, K.G. Whitney, C. Deeney, C.A. Coverdale and F.L. Cochran, Phys. Plasmas 7, 3480 (2001).) has made possible full multidimensional radiation MHD simulations of hot dense Z-pinch plasmas with a realistic description of the non-LTE ionization dynamics and radiation transport physics. In this study, we focus on the implementation of the TCRE radiation transport model in the Mach2 2D radiation MHD code. An application of the model is made through a full dynamical simulation of an argon gas puff pinch driven by a circuit model of the Z generator. An analysis of the simulation, in particular, the K- and L-shell radiation yields, as well as the spectral and spatial characteristics of the radiation will be presented. In addition, a comparison of this multidimensional transport method will be made with the existing radiative diffusion model.
NASA Astrophysics Data System (ADS)
Orlić, Ivica; Mekterović, Darko; Mekterović, Igor; Ivošević, Tatjana
2015-11-01
VIBA-Lab is a computer program originally developed by the author and co-workers at the National University of Singapore (NUS) as an interactive software package for simulation of Particle Induced X-ray Emission and Rutherford Backscattering Spectra. The original program is redeveloped to a VIBA-Lab 3.0 in which the user can perform semi-quantitative analysis by comparing simulated and measured spectra as well as simulate 2D elemental maps for a given 3D sample composition. The latest version has a new and more versatile user interface. It also has the latest data set of fundamental parameters such as Coster-Kronig transition rates, fluorescence yields, mass absorption coefficients and ionization cross sections for K and L lines in a wider energy range than the original program. Our short-term plan is to introduce routine for quantitative analysis for multiple PIXE and XRF excitations. VIBA-Lab is an excellent teaching tool for students and researchers in using PIXE and RBS techniques. At the same time the program helps when planning an experiment and when optimizing experimental parameters such as incident ions, their energy, detector specifications, filters, geometry, etc. By "running" a virtual experiment the user can test various scenarios until the optimal PIXE and BS spectra are obtained and in this way save a lot of expensive machine time.
NASA Astrophysics Data System (ADS)
Croes, Vivien; Lafleur, Trevor; Bonaventura, Zdeněk; Bourdon, Anne; Chabert, Pascal
2017-03-01
In this work we study the electron drift instability in Hall-effect thrusters (HETs) using a 2D electrostatic particle-in-cell (PIC) simulation. The simulation is configured with a Cartesian coordinate system modeling the radial-azimuthal (r{--}θ ) plane for large radius thrusters. A magnetic field, {{B}}0, is aligned along the Oy axis (r direction), a constant applied electric field, {{E}}0, along the Oz axis (perpendicular to the simulation plane), and the {{E}}0× {{B}}0 direction is along the Ox axis (θ direction). Although electron transport can be well described by electron–neutral collisions for low plasma densities, at high densities (similar to those in typical HETs), a strong instability is observed that enhances the electron cross-field mobility; even in the absence of electron–neutral collisions. The instability generates high frequency (of the order of MHz) and short wavelength (of the order of mm) fluctuations in both the azimuthal electric field and charged particle densities, and propagates in the {{E}}0× {{B}}0 direction with a velocity close to the ion sound speed. The correlation between the electric field and density fluctuations (which leads to an enhanced electron–ion friction force) is investigated and shown to be directly responsible for the increased electron transport. Results are compared with a recent kinetic theory, showing good agreement with the instability properties and electron transport.
SPH modeling of the Stickney impact at Phobos
NASA Astrophysics Data System (ADS)
Bruck Syal, Megan; Rovny, Jared; Owen, J. Michael; Miller, Paul L.
2016-10-01
Stickney crater stretches across nearly half the diameter of ~22-km Phobos, the larger of the two martian moons. The Stickney-forming impact would have had global consequences for Phobos, causing extensive damage to the satellite's interior and initiating large-scale resurfacing through ejecta blanket emplacement. Further, much of the ejected material that initially escaped the moon's tiny gravity (escape velocity of ~11 m/s) would have likely reimpacted on subsequent orbits. Modeling of the impact event is necessary to understand the conditions that allowed this "megacrater" to form without disrupting the entire satellite. Impact simulation results also provide a means to test several different hypotheses for how the mysterious families of parallel grooves may have formed at Phobos.We report on adaptive SPH simulations that successfully generate Stickney while avoiding catastrophic fragmentation of Phobos. Inclusion of target porosity and using sufficient numerical resolution in fully 3-D simulations are key for avoiding over-estimation of target damage. Cratering efficiency follows gravity-dominated scaling laws over a wide range of velocities (6-20 km/s) for the appropriate material constants. While the adaptive SPH results are used to constrain crater volume and fracture patterns within the target, additional questions about the fate of ejecta and final crater morphology within an unusual gravity environment can be addressed with complementary numerical methods. Results from the end of the hydrodynamics-controlled phase (tens of seconds after impact) are linked to a Discrete Element Method code, which can explore these processes over longer time scales (see Schwartz et al., this meeting).This work was performed under the auspices of the U.S. Department of Energy by Lawrence Livermore National Laboratory under Contract DE-AC52-07NA27344. LLNL-ABS-695442.
Zhang, Y; Yang, J; Liu, H; Liu, D
2014-06-01
Purpose: The purpose of this work is to compare the verification results of three solutions (2D/3D ionization chamber arrays measurement and Monte Carlo simulation), the results will help make a clinical decision as how to do our cervical IMRT verification. Methods: Seven cervical cases were planned with Pinnacle 8.0m to meet the clinical acceptance criteria. The plans were recalculated in the Matrixx and Delta4 phantom with the accurate plans parameters. The plans were also recalculated by Monte Carlo using leaf sequences and MUs for individual plans of every patient, Matrixx and Delta4 phantom. All plans of Matrixx and Delta4 phantom were delivered and measured. The dose distribution of iso slice, dose profiles, gamma maps of every beam were used to evaluate the agreement. Dose-volume histograms were also compared. Results: The dose distribution of iso slice and dose profiles from Pinnacle calculation were in agreement with the Monte Carlo simulation, Matrixx and Delta4 measurement. A 95.2%/91.3% gamma pass ratio was obtained between the Matrixx/Delta4 measurement and Pinnacle distributions within 3mm/3% gamma criteria. A 96.4%/95.6% gamma pass ratio was obtained between the Matrixx/Delta4 measurement and Monte Carlo simulation within 2mm/2% gamma criteria, almost 100% gamma pass ratio within 3mm/3% gamma criteria. The DVH plot have slightly differences between Pinnacle and Delta4 measurement as well as Pinnacle and Monte Carlo simulation, but have excellent agreement between Delta4 measurement and Monte Carlo simulation. Conclusion: It was shown that Matrixx/Delta4 and Monte Carlo simulation can be used very efficiently to verify cervical IMRT delivery. In terms of Gamma value the pass ratio of Matrixx was little higher, however, Delta4 showed more problem fields. The primary advantage of Delta4 is the fact it can measure true 3D dosimetry while Monte Carlo can simulate in patients CT images but not in phantom.
NASA Astrophysics Data System (ADS)
Berger, Richard; Chapman, T.; Banks, J. W.; Brunner, S.
2015-11-01
We present 2D+2V Vlasov simulations of Ion Acoustic waves (IAWs) driven by an external traveling-wave potential, ϕ0 (x , t) , with frequency, ω, and wavenumber, k, obeying the kinetic dispersion relation. Both electrons and ions are treated kinetically. Simulations with ϕ0 (x , t) , localized transverse to the propagation direction, model IAWs driven in a laser speckle. The waves bow with a positive or negative curvature of the wave fronts that depends on the sign of the nonlinear frequency shift ΔωNL , which is in turn determined by the magnitude of ZTe /Ti where Z is the charge state and Te , i is the electron, ion temperature. These kinetic effects result can cause modulational and self-focusing instabilities that transfer wave energy to kinetic energy. Linear dispersion properties of IAWs are used in laser propagation codes that predict the amount of light reflected by stimulated Brillouin scattering. At high enough amplitudes, the linear dispersion is invalid and these kinetic effects should be incorporated. Including the spatial and time scales of these instabilities is computationally prohibitive. We report progress including kinetic models in laser propagation codes. This work was performed under the auspices of the U.S. Department of Energy by Lawrence Livermore National Laboratory under Contract No. DE-AC52-07NA27344 and funded by the Laboratory Research and Development Program at LLNL under project tracking code 15.
NASA Astrophysics Data System (ADS)
Fischer, Jessica; Schoppmann, Kathrin; Knie, Miriam; Laforsch, Christian
2016-06-01
Bioregenerative Life Support Systems (BLSS) are an endeavor to create environments able to maintain human life e.g. on future long-duration space missions like flights to Mars. Based on cyclic biological processes, these systems will be independent from material resupply (such as food, water and oxygen). Due to their central role in limnic ecosystems, herbivorous microcrustaceans could act as key player in aquatic BLSS as they link oxygen liberating, autotrophic producers like algae to higher trophic levels, such as fish. However, before such BLSS can be utilized in space, organisms inhabiting these systems have to be studied thoroughly to disclose the gravitational impact on the biological processes. This is possible in real microgravity, but requires high financial resources, is opportunity-limited or periods of microgravity are very short. Yet, cost-effective and almost permanently accessible tools for gravitational research are ground-based facilities (GBFs), providing simulated microgravity. Among those GBFs is the so called 2D-clinostat. In the present study we demonstrate, that rotation of clinostat tubes does not generate acceleration in form of (predator resembling) small scale turbulence, which can be perceived by Daphnia cucullata. Additionally, embryonal development is not disturbed in subitaneous eggs of Daphnia magna and resting eggs of the ostracod Heterocypris incongruens (besides through restrictions in space within the narrow clinostat tubes), just as subsequent hatching from the respective eggs. Hence, our results indicate that clinorotation is a suitable method to simulate microgravity for microcrustaceans.
Zheng, Michael L; Zheng, David C; Wang, Jianping
2010-02-18
Infrared frequency region of 2000-2600 cm(-1) (i.e., ca. 4-5 microm in wavelength) is a well-known open spectral window for peptides and proteins. In this work, six unnatural amino acids (unAAs) were designed to have characteristic absorption bands located in this region. Key chemical groups that served as side chains in these unAAs are C[triple bond]C, Phe-C[triple bond]C, N=C=O, N=C=S, P-H, and Si-H, respectively. Cysteine (a natural AA having S-H in side chain) was also studied for comparison. The anharmonic vibrational properties, including frequencies, anharmonicities, and intermode couplings, were examined using the density functional theory. Broadband linear infrared (IR) and two-dimensional (2D) IR spectra were simulated for each molecule. It is found that all of the side chain modes have significant overtone diagonal anharmonicities. All have moderate transition dipole strengths except the C[triple bond]C and S-H stretching modes, in comparison with the C=O stretching mode. In each case, a collection of 2D IR cross peaks were predicted to appear due to the presence of the side chain groups, whose strengths are closely related to the intramolecular anharmonic interactions, and to the transition dipole strengths of the coupled vibrators. Further, potential energy distribution analysis and high-order anharmonic constant computation showed that these IR probes possess a varying degree of mode localization. The results suggest that these IR probes are potentially useful in complementing the well-studied amide-I mode, to investigate structures and dynamics of peptides and proteins.
NASA Technical Reports Server (NTRS)
Li, Xiaofan; Sui, C.-H.; Lau, K-M.; Adamec, D.
1999-01-01
A two-dimensional coupled ocean-cloud resolving atmosphere model is used to investigate possible roles of convective scale ocean disturbances induced by atmospheric precipitation on ocean mixed-layer heat and salt budgets. The model couples a cloud resolving model with an embedded mixed layer-ocean circulation model. Five experiment are performed under imposed large-scale atmospheric forcing in terms of vertical velocity derived from the TOGA COARE observations during a selected seven-day period. The dominant variability of mixed-layer temperature and salinity are simulated by the coupled model with imposed large-scale forcing. The mixed-layer temperatures in the coupled experiments with 1-D and 2-D ocean models show similar variations when salinity effects are not included. When salinity effects are included, however, differences in the domain-mean mixed-layer salinity and temperature between coupled experiments with 1-D and 2-D ocean models could be as large as 0.3 PSU and 0.4 C respectively. Without fresh water effects, the nocturnal heat loss over ocean surface causes deep mixed layers and weak cooling rates so that the nocturnal mixed-layer temperatures tend to be horizontally-uniform. The fresh water flux, however, causes shallow mixed layers over convective areas while the nocturnal heat loss causes deep mixed layer over convection-free areas so that the mixed-layer temperatures have large horizontal fluctuations. Furthermore, fresh water flux exhibits larger spatial fluctuations than surface heat flux because heavy rainfall occurs over convective areas embedded in broad non-convective or clear areas, whereas diurnal signals over whole model areas yield high spatial correlation of surface heat flux. As a result, mixed-layer salinities contribute more to the density differences than do mixed-layer temperatures.
NASA Astrophysics Data System (ADS)
Martelloni, Gianluca; Bagnoli, Franco; Di Cintio, Pierfrancesco
2015-04-01
We integrate existing soil infiltration modeling with particle based methods in order to simulate two and three-dimensional setups of triggered landslides. Commonly, the infiltration models are based on continuum schemes (e.g. Eulerian approach) by means of which it is possible to define the field of the pore pressure within a soil. By contrast, the particle based methods follow a Lagrangian scheme that allows one to identify the particle trajectories and their dynamical properties. In this work, in order to simulate the triggering mechanism, we apply the classical, fractal and fractional Richards equations and the Mohr-Coulomb failure criterion, adapted to the molecular dynamics technique. In our scheme the (local) positive pore pressure is simply implemented as a perturbation of the rest state of each grain. Therefore, the pore pressure function can be interpreted as a time-space dependent scalar field acting on each particle. To initialize the system we generate, using a molecular dynamics based algorithm, a mechanically stable disk (2D) or sphere (3D) packing simulating the consolidated soil. In this way, we can built the micro and macro pore structure related to different infiltration time scales. The inter-particle interactions are modeled with a Lennard-Jones like potential. The particle positions are updated in time, after and during a rainfall, with standard molecular dynamics. We analyze the sensitivity of the model with respect to the variation of some parameters such as hydraulic conductivity, cohesion, slope and friction angle, soil depth and fractional order of the generalized infiltration model. In addition, we consider both regular and random particle configurations. The results of our simulations are found to be in agreement with real landslides. In particular, the mean velocity patterns of the simulated landslides appear extremely similar to the observed ones. Moreover, it is possible to apply the method of the inverse surface displacement
Gargett, Maegan; Oborn, Brad; Metcalfe, Peter; Rosenfeld, Anatoly
2015-02-01
MRI-guided radiation therapy systems (MRIgRT) are being developed to improve online imaging during treatment delivery. At present, the operation of single point dosimeters and an ionization chamber array have been characterized in such systems. This work investigates a novel 2D diode array, named "magic plate," for both single point calibration and 2D positional performance, the latter being a key element of modern radiotherapy techniques that will be delivered by these systems. geant4 Monte Carlo methods have been employed to study the dose response of a silicon diode array to 6 MV photon beams, in the presence of in-line and perpendicularly aligned uniform magnetic fields. The array consists of 121 silicon diodes (dimensions 1.5 × 1.5 × 0.38 mm(3)) embedded in kapton substrate with 1 cm pitch, spanning a 10 × 10 cm(2) area in total. A geometrically identical, water equivalent volume was simulated concurrently for comparison. The dose response of the silicon diode array was assessed for various photon beam field shapes and sizes, including an IMRT field, at 1 T. The dose response was further investigated at larger magnetic field strengths (1.5 and 3 T) for a 4 × 4 cm(2) photon field size. The magic plate diode array shows excellent correspondence (< ± 1%) to water dose in the in-line orientation, for all beam arrangements and magnetic field strengths investigated. The perpendicular orientation, however, exhibits a dose shift with respect to water at the high-dose-gradient beam edge of jaw-defined fields [maximum (4.3 ± 0.8)% over-response, maximum (1.8 ± 0.8)% under-response on opposing side for 1 T, uncertainty 1σ]. The trend is not evident in areas with in-field dose gradients typical of IMRT dose maps. A novel 121 pixel silicon diode array detector has been characterized by Monte Carlo simulation for its performance inside magnetic fields representative of current prototype and proposed MRI-linear accelerator systems. In the in-line orientation, the
Gargett, Maegan Rosenfeld, Anatoly; Oborn, Brad; Metcalfe, Peter
2015-02-15
Purpose: MRI-guided radiation therapy systems (MRIgRT) are being developed to improve online imaging during treatment delivery. At present, the operation of single point dosimeters and an ionization chamber array have been characterized in such systems. This work investigates a novel 2D diode array, named “magic plate,” for both single point calibration and 2D positional performance, the latter being a key element of modern radiotherapy techniques that will be delivered by these systems. Methods: GEANT4 Monte Carlo methods have been employed to study the dose response of a silicon diode array to 6 MV photon beams, in the presence of in-line and perpendicularly aligned uniform magnetic fields. The array consists of 121 silicon diodes (dimensions 1.5 × 1.5 × 0.38 mm{sup 3}) embedded in kapton substrate with 1 cm pitch, spanning a 10 × 10 cm{sup 2} area in total. A geometrically identical, water equivalent volume was simulated concurrently for comparison. The dose response of the silicon diode array was assessed for various photon beam field shapes and sizes, including an IMRT field, at 1 T. The dose response was further investigated at larger magnetic field strengths (1.5 and 3 T) for a 4 × 4 cm{sup 2} photon field size. Results: The magic plate diode array shows excellent correspondence (< ± 1%) to water dose in the in-line orientation, for all beam arrangements and magnetic field strengths investigated. The perpendicular orientation, however, exhibits a dose shift with respect to water at the high-dose-gradient beam edge of jaw-defined fields [maximum (4.3 ± 0.8)% over-response, maximum (1.8 ± 0.8)% under-response on opposing side for 1 T, uncertainty 1σ]. The trend is not evident in areas with in-field dose gradients typical of IMRT dose maps. Conclusions: A novel 121 pixel silicon diode array detector has been characterized by Monte Carlo simulation for its performance inside magnetic fields representative of current prototype and proposed MRI
NASA Astrophysics Data System (ADS)
Prins, Steven L.; Blatchford, James; Olubuyide, Oluwamuyiwa; Riley, Deborah; Chang, Simon; Hong, Qi-Zhong; Kim, T. S.; Borges, Ricardo; Lin, Li
2009-03-01
As design rules and corresponding logic standard cell layouts continue to shrink node-on-node in accordance with Moore's law, complex 2D interactions, both intra-cell and between cells, become much more prominent. For example, in lithography, lack of scaling of λ/NA implies aggressive use of resolution enhancement techniques to meet logic scaling requirements-resulting in adverse effects such as 'forbidden pitches'-and also implies an increasing range of optical influence relative to cell size. These adverse effects are therefore expected to extend well beyond the cell boundary, leading to lithographic marginalities that occur only when a given cell is placed "in context" with other neighboring cells in a variable design environment [1]. This context dependence is greatly exacerbated by increased use of strain engineering techniques such as SiGe and dual-stress liners (DSL) to enhance transistor performance, both of which also have interaction lengths on the order of microns. The use of these techniques also breaks the formerly straightforward connection between lithographic 'shapes' and end-of-line electrical performance, thus making the formulation of design rules that are robust to process variations and complex 2D interactions more difficult. To address these issues, we have developed a first-principles-based simulation flow to study contextdependent electrical effects in layout, arising not only from lithography, but also from stress and interconnect parasitic effects. This flow is novel in that it can be applied to relatively large layout clips- required for context-dependent analysis-without relying on semi-empirical or 'black-box' models for the fundamental electrical effects. The first-principles-based approach is ideal for understanding contextdependent effects early in the design phase, so that they can be mitigated through restrictive design rules. The lithographic simulations have been discussed elsewhere [1] and will not be presented in detail. The
NASA Astrophysics Data System (ADS)
Babbick, M.; Dijkstra, C.; Larkin, O. J.; Anthony, P.; Davey, M. R.; Power, J. B.; Lowe, K. C.; Cogoli-Greuter, M.; Hampp, R.
Gravity is an important environmental factor that controls plant growth and development. Studies have shown that the perception of gravity is not only a property of specialized cells, but can also be performed by undifferentiated cultured cells. In this investigation, callus of Arabidopsis thaliana cv. Columbia was used to investigate the initial steps of gravity-related signalling cascades, through altered expression of transcription factors (TFs). TFs are families of small proteins that regulate gene expression by binding to specific promoter sequences. Based on microarray studies, members of the gene families WRKY, MADS-box, MYB, and AP2/EREBP were selected for investigation, as well as members of signalling chains, namely IAA 19 and phosphoinositol-4-kinase. Using qRT-PCR, transcripts were quantified within a period of 30 min in response to hypergravity (8 g), clinorotation [2-D clinostat and 3-D random positioning machine (RPM)] and magnetic levitation (ML). The data indicated that (1) changes in gravity induced stress-related signalling, and (2) exposure in the RPM induced changes in gene expression which resemble those of magnetic levitation. Two dimensional clinorotation resulted in responses similar to those caused by hypergravity. It is suggested that RPM and ML are preferable to simulate microgravity than clinorotation.
NASA Astrophysics Data System (ADS)
Ocłoń, Paweł; Łopata, Stanisław; Nowak, Marzena
2014-09-01
This study presents a novel, simplified model for the time-efficient simulation of transient conjugate heat transfer in round tubes. The flow domain and the tube wall are modeled in 1D and 2D, respectively and empirical correlations are used to model the flow domain in 1D. The model is particularly useful when dealing with complex physics, such as flow boiling, which is the main focus of this study. The tube wall is assumed to have external fins. The flow is vertical upwards. Note that straightforward computational fluid dynamics (CFD) analysis of conjugate heat transfer in a system of tubes, leads to 3D modeling of fluid and solid domains. Because correlation is used and dimensionality reduced, the model is numerically more stable and computationally more time-efficient compared to the CFD approach. The benefit of the proposed approach is that it can be applied to large systems of tubes as encountered in many practical applications. The modeled equations are discretized in space using the finite volume method, with central differencing for the heat conduction equation in the solid domain, and upwind differencing of the convective term of the enthalpy transport equation in the flow domain. An explicit time discretization with forward differencing was applied to the enthalpy transport equation in the fluid domain. The conduction equation in the solid domain was time discretized using the Crank-Nicholson scheme. The model is applied in different boundary conditions and the predicted boiling patterns and temperature fields are discussed.
NASA Astrophysics Data System (ADS)
Ocłoń, Paweł; Łopata, Stanisław; Nowak, Marzena
2015-04-01
This study presents a novel, simplified model for the time-efficient simulation of transient conjugate heat transfer in round tubes. The flow domain and the tube wall are modeled in 1D and 2D, respectively and empirical correlations are used to model the flow domain in 1D. The model is particularly useful when dealing with complex physics, such as flow boiling, which is the main focus of this study. The tube wall is assumed to have external fins. The flow is vertical upwards. Note that straightforward computational fluid dynamics (CFD) analysis of conjugate heat transfer in a system of tubes, leads to 3D modeling of fluid and solid domains. Because correlation is used and dimensionality reduced, the model is numerically more stable and computationally more time-efficient compared to the CFD approach. The benefit of the proposed approach is that it can be applied to large systems of tubes as encountered in many practical applications. The modeled equations are discretized in space using the finite volume method, with central differencing for the heat conduction equation in the solid domain, and upwind differencing of the convective term of the enthalpy transport equation in the flow domain. An explicit time discretization with forward differencing was applied to the enthalpy transport equation in the fluid domain. The conduction equation in the solid domain was time discretized using the Crank-Nicholson scheme. The model is applied in different boundary conditions and the predicted boiling patterns and temperature fields are discussed.
Icarus: A 2D direct simulation Monte Carlo (DSMC) code for parallel computers. User`s manual - V.3.0
Bartel, T.; Plimpton, S.; Johannes, J.; Payne, J.
1996-10-01
Icarus is a 2D Direct Simulation Monte Carlo (DSMC) code which has been optimized for the parallel computing environment. The code is based on the DSMC method of Bird and models from free-molecular to continuum flowfields in either cartesian (x, y) or axisymmetric (z, r) coordinates. Computational particles, representing a given number of molecules or atoms, are tracked as they have collisions with other particles or surfaces. Multiple species, internal energy modes (rotation and vibration), chemistry, and ion transport are modelled. A new trace species methodology for collisions and chemistry is used to obtain statistics for small species concentrations. Gas phase chemistry is modelled using steric factors derived from Arrhenius reaction rates. Surface chemistry is modelled with surface reaction probabilities. The electron number density is either a fixed external generated field or determined using a local charge neutrality assumption. Ion chemistry is modelled with electron impact chemistry rates and charge exchange reactions. Coulomb collision cross-sections are used instead of Variable Hard Sphere values for ion-ion interactions. The electrostatic fields can either be externally input or internally generated using a Langmuir-Tonks model. The Icarus software package includes the grid generation, parallel processor decomposition, postprocessing, and restart software. The commercial graphics package, Tecplot, is used for graphics display. The majority of the software packages are written in standard Fortran.
NASA Astrophysics Data System (ADS)
Zhao, Yi; Fu, Ceji
2016-10-01
Tailoring the spectrum of thermal emission from the emitter is important for improving the performance of a thermophotovoltaic (TPV) system. In this work, a two-dimensional (2D) layered grating structure made of SiO2 and tungsten (W), which can realize wavelength-selective control of thermal emission, was proposed for a potential emitter in TPV applications. Numerical simulations of the spectral emissivity of the structure from the ultraviolet (UV) to the mid-infrared region reveals that the spectral-normal emissivity of the structure is enhanced to above 0.95 in the wavelength region from 0.55 μm to 1.9 μm for both TE and TM waves, but drops sharply at wavelength larger than 2 μm. Physical mechanisms responsible for the wavelength-selective emissivity were elucidated as due to resonance of magnetic polaritons (MPs) in the SiO2 spacer and in the grooves of the tungsten grating, Wood's anomaly (WA), excitation of surface plasmon polaritons (SPPs) and wave interference. Furthermore, the structure was found to exhibit quasi-diffuse and polarization-insensitive features of thermal emission, suggesting that the proposed structure can serve as the emitter in the design of high performance TPV systems.
NASA Astrophysics Data System (ADS)
Tirupathi, S.; Schiemenz, A. R.; Liang, Y.; Parmentier, E.; Hesthaven, J.
2013-12-01
The style and mode of melt migration in the mantle are important to the interpretation of basalts erupted on the surface. Both grain-scale diffuse porous flow and channelized melt migration have been proposed. To better understand the mechanisms and consequences of melt migration in a heterogeneous mantle, we have undertaken a numerical study of reactive dissolution in an upwelling and viscously deformable mantle where solubility of pyroxene increases upwards. Our setup is similar to that described in [1], except we use a larger domain size in 2D and 3D and a new numerical method. To enable efficient simulations in 3D through parallel computing, we developed a high-order accurate numerical method for the magma dynamics problem using discontinuous Galerkin methods and constructed the problem using the numerical library deal.II [2]. Linear stability analyses of the reactive dissolution problem reveal three dynamically distinct regimes [3] and the simulations reported in this study were run in the stable regime and the unstable wave regime where small perturbations in porosity grows periodically. The wave regime is more relevant to melt migration beneath the mid-ocean ridges but computationally more challenging. Extending the 2D simulations in the stable regime in [1] to 3D using various combinations of sustained perturbations in porosity at the base of the upwelling column (which may result from a viened mantle), we show the geometry and distribution of dunite channel and high-porosity melt channels are highly correlated with inflow perturbation through superposition. Strong nonlinear interactions among compaction, dissolution, and upwelling give rise to porosity waves and high-porosity melt channels in the wave regime. These compaction-dissolution waves have well organized but time-dependent structures in the lower part of the simulation domain. High-porosity melt channels nucleate along nodal lines of the porosity waves, growing downwards. The wavelength scales
Kolkoori, Sanjeevareddy; Chitti Venkata, Krishnamurthy; Balasubramaniam, Krishnan
2015-01-01
This article presents an analytical approach for simulation of ultrasonic diffracted wave signals from cracks in two-dimensional geometries based on a novel Huygens-Fresnel Diffraction Model (HFDM). The model employs the frequency domain far-field displacement expressions derived by Miller and Pursey in 2D for a line source located on the free surface boundary of a semi-infinite elastic medium. At each frequency in the bandwidth of a pulsed excitation, the complex diffracted field is obtained by summation of displacements due to the unblocked virtual sources located in the section containing a vertical crack. The time-domain diffracted wave signal amplitudes in a general isotropic solid are obtained by standard Fast Fourier Transform (FFT) procedures. The wedge based finite aperture transducer refracted beam profiles were modelled by treating the finite dimension transducer as an array of line sources. The proposed model is able to evaluate back-wall signal amplitude and lateral wave signal amplitude, quantitatively. The model predicted range-dependent diffracted amplitudes from the edge of a bottom surface-breaking crack in the isotropic steel specimen were compared with Geometrical Theory of Diffraction (GTD) results. The good agreement confirms the validity of the HFDM method. The simulated ultrasonic time-of-flight diffraction (TOFD) A-scan signals for surface-breaking crack lengths 2 mm and 4 mm in a 10 mm thick aluminium specimen were compared quantitatively with the experimental results. Finally, important applications of HFDM method to the ultrasonic quantitative non-destructive evaluation are discussed.
NASA Astrophysics Data System (ADS)
López-Venegas, Alberto M.; Horrillo, Juan; Pampell-Manis, Alyssa; Huérfano, Victor; Mercado, Aurelio
2015-06-01
The most recent tsunami observed along the coast of the island of Puerto Rico occurred on October 11, 1918, after a magnitude 7.2 earthquake in the Mona Passage. The earthquake was responsible for initiating a tsunami that mostly affected the northwestern coast of the island. Runup values from a post-tsunami survey indicated the waves reached up to 6 m. A controversy regarding the source of the tsunami has resulted in several numerical simulations involving either fault rupture or a submarine landslide as the most probable cause of the tsunami. Here we follow up on previous simulations of the tsunami from a submarine landslide source off the western coast of Puerto Rico as initiated by the earthquake. Improvements on our previous study include: (1) higher-resolution bathymetry; (2) a 3D-2D coupled numerical model specifically developed for the tsunami; (3) use of the non-hydrostatic numerical model NEOWAVE (non-hydrostatic evolution of ocean WAVE) featuring two-way nesting capabilities; and (4) comprehensive energy analysis to determine the time of full tsunami wave development. The three-dimensional Navier-Stokes model tsunami solution using the Navier-Stokes algorithm with multiple interfaces for two fluids (water and landslide) was used to determine the initial wave characteristic generated by the submarine landslide. Use of NEOWAVE enabled us to solve for coastal inundation, wave propagation, and detailed runup. Our results were in agreement with previous work in which a submarine landslide is favored as the most probable source of the tsunami, and improvement in the resolution of the bathymetry yielded inundation of the coastal areas that compare well with values from a post-tsunami survey. Our unique energy analysis indicates that most of the wave energy is isolated in the wave generation region, particularly at depths near the landslide, and once the initial wave propagates from the generation region its energy begins to stabilize.
van Winden, Wouter A; van Gulik, Walter M; Schipper, Dick; Verheijen, Peter J T; Krabben, Preben; Vinke, Jacobus L; Heijnen, Joseph J
2003-07-05
At present two alternative methods are available for analyzing the fluxes in a metabolic network: (1) combining measurements of net conversion rates with a set of metabolite balances including the cofactor balances, or (2) leaving out the cofactor balances and fitting the resulting free fluxes to measured (13)C-labeling data. In this study these two approaches are applied to the fluxes in the glycolysis and pentose phosphate pathway of Penicillium chrysogenum growing on either ammonia or nitrate as the nitrogen source, which is expected to give different pentose phosphate pathway fluxes. The presented flux analyses are based on extensive sets of 2D [(13)C, (1)H] COSY data. A new concept is applied for simulation of this type of (13)C-labeling data: cumulative bondomer modeling. The outcomes of the (13)C-labeling based flux analysis substantially differ from those of the pure metabolite balancing approach. The fluxes that are determined using (13)C-labeling data are shown to be highly dependent on the chosen metabolic network. Extending the traditional nonoxidative pentose phosphate pathway with additional transketolase and transaldolase reactions, extending the glycolysis with a fructose 6-phosphate aldolase/dihydroxyacetone kinase reaction sequence or adding a phosphoenolpyruvate carboxykinase reaction to the model considerably improves the fit of the measured and the simulated NMR data. The results obtained using the extended version of the nonoxidative pentose phosphate pathway model show that the transketolase and transaldolase reactions need not be assumed reversible to get a good fit of the (13)C-labeling data. Strict statistical testing of the outcomes of (13)C-labeling based flux analysis using realistic measurement errors is demonstrated to be of prime importance for verifying the assumed metabolic model. Copyright 2003 Wiley Periodicals, Inc. Biotechnol Bioeng 83: 75-92, 2003.
NASA Astrophysics Data System (ADS)
Maneva, Yana; Alvarez Laguna, Alejandro; Lani, Andrea; Poedts, Stefaan
2017-04-01
Partial ionization effects related to electron-neutral and ion-neutral interactions play an important role in the weakly ionized solar chromosphere, where the number density of neutrals vastly exceeds the number density of protons. The interactions between the magnetized plasma and the neutral particles can significantly change the resistivity of the plasma and lead to additional heating. Such multi-species interactions cannot be described within the simple MHD single fluid models and the non-equilibrium partial ionization effects cannot be properly captured even when generalized MHD models including Ambipolar diffusion terms are taken into account. A more detailed approach to describe these processes in the solar chromosphere is to use multi-fluid numerical simulations where the neutrals and the plasma species are described as separate fluids, coupled through the chemical reactions, additional currents, friction and resistivity terms. In this study we have elaborate on our previous results and perform 2D two-fluid simulations with an electron-proton fluid and a separate neutral fluid using an improved model where the density and temperature dependence of the plasma viscosities and heat conduction for the neutrals is assumed. Previously we have investigated the chromospheric propagation of fast and slow waves generated by a fixed photospheric foot-point velocity driver. In this study we have varied the velocity driver's frequency and location. We have also distinguished between the types of drivers which excite pure slow/Alfvén waves or a mixture of slow and fast waves. Finally, we have studied the non-uniform heating caused by the waves.
NASA Astrophysics Data System (ADS)
Akgün, Aykut; Yakut, Mehmet
2017-04-01
Rockfalls are one of the most common and important mass movement type encountered throughout both the World and Turkey. In Turkey, especially in Black Sea Region, rock fall cases frequently occur due to the steep topography, lithological characteristics, improper land use and structural elements such as discontinuity density. As a consequence of rock fall cases, serious injury and loss of lives can be observed in the area. In this study, a residential area located in Trabzon city (Northeast part of Black Sea Region, Turkey) was handled in point of rock fall hazard assessment. In the area, several rock fall cases occurred, and one of them occurred in year of 2009, resulted two people died. The last one also occurred in year of 2016, and the source of both cases are the same location. In the area, several houses and working places are available, and up to now any effective protection measurements have been installed. The area is also located near a highway connecting Trabzon city to the southeast region of Turkey, and daily vehicle number is highly considerable. Due to all these sensitive issues, the area was selected to be study location. In order to make a rock fall hazard assessment in the area to determine and propose an effective mitigation system, a 2D and 3D simulation models were applied. Initially a digital elevation model (DEM) of the area was obtained by a 1:1000 scale digital topographical sheets. By using the obtained digital terrain data, detailed cross sections of the slope profiles were created. Then, a detailed field and photo survey was carried out