Science.gov

Sample records for 2d sph simulations

  1. An improved SPH scheme for cosmological simulations

    NASA Astrophysics Data System (ADS)

    Beck, A. M.; Murante, G.; Arth, A.; Remus, R.-S.; Teklu, A. F.; Donnert, J. M. F.; Planelles, S.; Beck, M. C.; Förster, P.; Imgrund, M.; Dolag, K.; Borgani, S.

    2016-01-01

    We present an implementation of smoothed particle hydrodynamics (SPH) with improved accuracy for simulations of galaxies and the large-scale structure. In particular, we implement and test a vast majority of SPH improvement in the developer version of GADGET-3. We use the Wendland kernel functions, a particle wake-up time-step limiting mechanism and a time-dependent scheme for artificial viscosity including high-order gradient computation and shear flow limiter. Additionally, we include a novel prescription for time-dependent artificial conduction, which corrects for gravitationally induced pressure gradients and improves the SPH performance in capturing the development of gas-dynamical instabilities. We extensively test our new implementation in a wide range of hydrodynamical standard tests including weak and strong shocks as well as shear flows, turbulent spectra, gas mixing, hydrostatic equilibria and self-gravitating gas clouds. We jointly employ all modifications; however, when necessary we study the performance of individual code modules. We approximate hydrodynamical states more accurately and with significantly less noise than standard GADGET-SPH. Furthermore, the new implementation promotes the mixing of entropy between different fluid phases, also within cosmological simulations. Finally, we study the performance of the hydrodynamical solver in the context of radiative galaxy formation and non-radiative galaxy cluster formation. We find galactic discs to be colder and more extended and galaxy clusters showing entropy cores instead of steadily declining entropy profiles. In summary, we demonstrate that our improved SPH implementation overcomes most of the undesirable limitations of standard GADGET-SPH, thus becoming the core of an efficient code for large cosmological simulations.

  2. A peridynamics-SPH coupling approach to simulate soil fragmentation induced by shock waves

    NASA Astrophysics Data System (ADS)

    Ren, Bo; Fan, Houfu; Bergel, Guy L.; Regueiro, Richard A.; Lai, Xin; Li, Shaofan

    2015-02-01

    In this work, a nonlocal peridynamics-smoothed particle hydrodynamics (SPH) coupling formulation has been developed and implemented to simulate soil fragmentation induced by buried explosions. A peridynamics-SPH coupling strategy has been developed to model the soil-explosive gas interaction by assigning the soil as peridynamic particles and the explosive gas as SPH particles. Artificial viscosity and ghost particle enrichment techniques are utilized in the simulation to improve computational accuracy. A Monaghan type of artificial viscosity function is incorporated into both the peridynamics and SPH formulations in order to eliminate numerical instabilities caused by the shock wave propagation. Moreover, a virtual or ghost particle method is introduced to improve the accuracy of peridynamics approximation at the boundary. Three numerical simulations have been carried out based on the proposed peridynamics-SPH theory: (1) a 2D explosive gas expansion using SPH, (2) a 2D peridynamics-SPH coupling example, and (3) an example of soil fragmentation in a 3D soil block due to shock wave expansion. The simulation results reveal that the peridynamics-SPH coupling method can successfully simulate soil fragmentation generated by the shock wave due to buried explosion.

  3. SPH Simulations of Stephan's Quintet

    NASA Astrophysics Data System (ADS)

    Hwang, J.-S.; Struck, C.; Renaud, F.; Appleton, P. N.

    2013-10-01

    We present smoothed particle hydrodynamic models of the interactions in the compact galaxy group, Stephan's Quintet. Adding thermohydrodynamic effects to the earlier collisionless N-body simulations of Renaud et al., we further investigate the dynamical interaction history and evolution of the intergalactic gas of Stephan's Quintet. Specifically, we reproduce the major stellar and gas features of the group and also model the formation of the hot X-ray gas, the group-wide shock, and emission line gas as the result of NGC 7318b colliding with the group. We compare our model results to multi-wavelength observations.

  4. SPH simulations of high-speed collisions

    NASA Astrophysics Data System (ADS)

    Rozehnal, Jakub; Broz, Miroslav

    2016-10-01

    Our work is devoted to a comparison of: i) asteroid-asteroid collisions occurring at lower velocities (about 5 km/s in the Main Belt), and ii) mutual collisions of asteroids and cometary nuclei usually occurring at significantly higher relative velocities (> 10 km/s).We focus on differences in the propagation of the shock wave, ejection of the fragments and possible differences in the resultingsize-frequency distributions of synthetic asteroid families. We also discuss scaling with respect to the "nominal" target diameter D = 100 km, projectile velocity 3-7 km/s, for which a number of simulations were done so far (Durda et al. 2007, Benavidez et al. 2012).In the latter case of asteroid-comet collisions, we simulate the impacts of brittle or pre-damaged impactors onto solid monolithic targets at high velocities, ranging from 10 to 15 km/s. The purpose of this numerical experiment is to better understand impact processes shaping the early Solar System, namely the primordial asteroid belt during during the (late) heavy bombardment (as a continuation of Broz et al. 2013).For all hydrodynamical simulations we use a smoothed-particle hydrodynamics method (SPH), namely the lagrangian SPH3D code (Benz & Asphaug 1994, 1995). The gravitational interactions between fragments (re-accumulation) is simulated with the Pkdgrav tree-code (Richardson et al. 2000).

  5. Water Flow Simulation using Smoothed Particle Hydrodynamics (SPH)

    NASA Technical Reports Server (NTRS)

    Vu, Bruce; Berg, Jared; Harris, Michael F.

    2014-01-01

    Simulation of water flow from the rainbird nozzles has been accomplished using the Smoothed Particle Hydrodynamics (SPH). The advantage of using SPH is that no meshing is required, thus the grid quality is no longer an issue and accuracy can be improved.

  6. RAM simulation model for SPH/RSV systems

    SciTech Connect

    Schryver, J.C.; Primm, A.H.; Nelson, S.C.

    1995-12-31

    The US Army`s Project Manager, Crusader is sponsoring the development of technologies that apply to the Self-Propelled Howitzer (SPH), formerly the Advanced Field Artillery System (AFAS), and Resupply Vehicle (RSV), formerly the Future Armored Resupply Vehicle (FARV), weapon system. Oak Ridge National Laboratory (ORNL) is currently performing developmental work in support of the SPH/PSV Crusader system. Supportive analyses of reliability, availability, and maintainability (RAM) aspects were also performed for the SPH/RSV effort. During FY 1994 and FY 1995 OPNL conducted a feasibility study to demonstrate the application of simulation modeling for RAM analysis of the Crusader system. Following completion of the feasibility study, a full-scale RAM simulation model of the Crusader system was developed for both the SPH and PSV. This report provides documentation for the simulation model as well as instructions in the proper execution and utilization of the model for the conduct of RAM analyses.

  7. Generating optimal initial conditions for smooth particle hydrodynamics (SPH) simulations

    SciTech Connect

    Diehl, Steven; Rockefeller, Gabriel M; Fryer, Christopher L

    2008-01-01

    We present a new optimal method to set up initial conditions for Smooth Particle Hydrodynamics Simulations, which may also be of interest for N-body simulations. This new method is based on weighted Voronoi tesselations (WVTs) and can meet arbitrarily complex spatial resolution requirements. We conduct a comprehensive review of existing SPH setup methods, and outline their advantages, limitations and drawbacks. A serial version of our WVT setup method is publicly available and we give detailed instruction on how to easily implement the new method on top of an existing parallel SPH code.

  8. Particle Splitting: A New Method for SPH Star Formation Simulations

    NASA Astrophysics Data System (ADS)

    Kitsionas, Spyridon

    2003-07-01

    We have invented a new algorithm to use with self-gravitating SPH Star Formation codes. The new method is designed to enable SPH simulations to self-regulate their numerical resolution, i.e. the number of SPH particles; the latter is calculated using the Jeans condition (Bate & Burkert 1997) and the local hydrodynamic conditions of the gas. We apply our SPH with Particle Splitting code to cloud-cloud collision simulations. Chapter 2 lists the properties of our standard SPH code. Chapter 3 discusses the efficiency of the standard code as this is applied to simulations of rotating, uniform clouds with m=2 density perturbations. Chapter 4 [astro-ph/0203057] describes the new method and the tests that it has successfully been applied to. It also contains the results of the application of Particle Splitting to the case of rotating clouds as those of Chapter 3, where, with great computational efficiency, we have reproduced the results of FD codes and SPH simulations with large numbers of particles. Chapter 5 gives a detailed account of the cloud-cloud collisions studied, starting from a variety of initial conditions produced by altering the cloud mass, cloud velocity and the collision impact parameter. In the majority of the cases studied, the collisions produced filaments (similar to those observed in ammonia in nearby Star Forming Regions) or networks of filaments; groups of protostellar cores have been produced by fragmentation of the filaments. The accretion rates at these cores are comparable to those of Class 0 objects. Due to time-step constraints the simulations stop early in their evolution. The star formation efficiency of this mechanism is extrapolated in time and is found to be 10-20%.

  9. SPH simulation of high density hydrogen compression

    NASA Astrophysics Data System (ADS)

    Ferrel, R.; Romero, V.

    1998-07-01

    The density dependence of the electronic energy band gap of the hydrogen has been studied with respect to the insulator-metal (IM) transition. The valence conduction band gap of solid hydrogen is about 15eV at zero pressure, therefore very high pressures are required to close the gap and achieve metallization. We propose to investigate what will be the degree to which one can expect to maintain a shockless compression of hydrogen with a low temperature (close to that of a cold isentrope) and verify if it is possible to achieve metallization. Multistage compression will be driven by energetic materials in a cylindrical implosion system, in which we expect a slow compression rate that will maintain the low temperature in the isentropic compression. It is hoped that pressures on the order of 100Mbars can be achieved while maintaining low temperatures. In order to better understand this multistage compression a smooth particle hydrodynamics (SPH) analysis has been performed. Since the SPH technique does not use a grid structure it is well suited to analyzing spatial deformation processes. This analysis will be used to improve the design of possible multistage compression devices.

  10. SPH Simulation of High Density Hydrogen Compression

    NASA Astrophysics Data System (ADS)

    Ferrel, R.; Romero, Van D.

    1997-07-01

    The density dependence of the electronic energy band gap of hydrogen has been studied with respect to the insulator-metal (IM) transition. The valence conduction band gap of solid hydrogen is about 15eV at zero pressure, therefore very high pressures are required to close the gap and achieve metallization. We are planning to investigate the degree to which shock less compression of hydrogen can be maintained at low temperature isentrope) and explore the possibililty of achieving metallization. Multistage compression will be driven by energetic materials in a cylindrical implosion system, in which we expect a slow compression rate that will maintain the low temperature in the isentropic compression. It is hoped that pressures of the order of 100 Mbars can be achieved while maintaining low temperatures. In order to understand this multistage compression better a smooth particle hydrodynamics (SPH) analysis has been performed. Since the SPH technique uses a gridless structure it is well suited to analyzing spatial deformation processes. This paper presents the analysis which will be used to improve the design of possible multistage compression devices.

  11. Numerical Simulation of Interacting Stellar Winds Model Using Smoothed Particle Hydrodynamics (SPH)

    NASA Astrophysics Data System (ADS)

    Thronson, H. A., Jr.; Li, P. S.; Kwok, S.

    1997-12-01

    In the past decade, the Interacting Stellar Winds (ISW) model has been shown to be successful in explaining the formation of planetary nebulae, Wolf-Rayet nebulae, slow novae, and supernovae. Since analytical methods applied to the ISW model have been limited to the spherical symmetric (1D) geometry, numerical methods are necessary for axisymmetric (2D) or arbitrary (3D) geometries, such as the study of formation and evolution of planetary nebulae, and for symbiotic nova outbursts. The Smoothed Particle Hydrodynamics (SPH) algorithm has been developed to study hydrodynamics using the particle method. This algorithm has been applied in many different fields successfully. In this paper, we apply the SPH algorithm using the TREE code to the problem of interacting winds dynamics. We present three simulations: (1) the interaction of two winds in spherical symmetry to demonstrate the validity of the algorithm in dealing with ISW modeling, (2) the formation and evolution of an axisymmetric nebula in the first 500 years, and (3) the interacting-colliding winds caused by a slow nova outburst in a symbiotic system. It is the first time that the SPH algorithm has been applied to an ISW simulation. The SPH algorithm is proved to be an accurate and powerful tool in studying ISW model. This work is supported by NASA's US ISO program and the University of Calgary.

  12. SPH-based simulation of multi-material asteroid collisions

    NASA Astrophysics Data System (ADS)

    Maindl, T. I.; Schäfer, C.; Speith, R.; Süli, Á.; Forgács-Dajka, E.; Dvorak, R.

    2013-11-01

    We give a brief introduction to smoothed particle hydrodynamics methods for continuum mechanics. Specifically, we present our 3D SPH code to simulate and analyze collisions of asteroids consisting of two types of material: basaltic rock and ice. We consider effects like brittle failure, fragmentation, and merging in different impact scenarios. After validating our code against previously published results we present first collision results based on measured values for the Weibull flaw distribution parameters of basalt.

  13. Vortical and nonlinear effects in the roll motion of a 2-D body in the free surface investigated by SPH

    NASA Astrophysics Data System (ADS)

    Olmez, O.; Ozbulut, M.; Yildiz, M.; Goren, O.

    2016-06-01

    The present study investigates the vortical and nonlinear effects in the roll motion of a 2-D body with square cross-sections by using Smoothed Particle Hydrodynamics (SPH). A 2-D rigid body with square cross-section is taken into account for the benchmark study and subjected to the oscillatory roll motion with a given angular frequency. The governing equations are continuity equation and Euler's equation with artificial viscosity term. Weakly Compressible SPH (WCSPH) scheme is employed for the discretization of the governing equations. Velocities of the fluid particles are updated by means of XSPH+Artificial Particle Displacement (VXSPH+APD) algorithm. In this method only the free surface fluid particles are subjected to VXSPH algorithm while the APD algorithm is employed for the fully populated flow regions. The hybrid usage of numerical treatment keeps free surface particles together by creating an artificial surface tension on the free surface. VXSPH+APD is a proven numerical treatment to provide the most accurate results for this type of free surface flows (Ozbulut et al. 2014). The results of the present study are compared with those of the experimental studies as well as with those of the numerical methods obtained from the current literature.

  14. SPH simulations of impacts on rubble pile asteroids

    NASA Astrophysics Data System (ADS)

    Deller, J.; Lowry, S.; Price, M. C.; Sierks, H.; Snodgrass, C.

    2013-09-01

    Many rubble pile asteroids with low bulk densities, like Itokawa, must include a high level of macroporosity, probably more than 40% [1]. Although little is known about their internal structure, numerical simulations of impact events on these rubble pile asteroids rely on assumptions on how the voids are distributed. While most hydrocodes do not distinguish between microand macroporosity, Benavidez et al. [2] introduced a rubble pile model where the asteroid is represented as a spherical target shell filled with an uneven distribution of basalt spheres ranging in radius from 8% to 20% of the asteroid's radius. In this study, we present a new approach to create rubble pile simulants for the use in impact simulations and quantify the dependence of impact outcomes on the internal structure of the target. The formation of the asteroid is modelled as a gravitational aggregation of spherical 'pebbles', that form the building blocks of our target. This aggregate is then converted into a high-resolution Smoothed Particle Hydrodynamics (SPH) model, which also accounts for macroporosity inside the pebbles'. To simulate high-velocity impacts on these models, we use the SPH solver in the code Autodyn. We will compare impact event outcomes for a large set of internal configurations to explore the parameter space of our model-building process. The analysis of the fragment size distribution and the disruption threshold will quantify the specific influence of each set-up parameter. This work is ongoing and we will present preliminary results at the meeting.

  15. Gas stripping in galaxy clusters: a new SPH simulation approach

    NASA Astrophysics Data System (ADS)

    Jáchym, P.; Palouš, J.; Köppen, J.; Combes, F.

    2007-09-01

    Aims:The influence of a time-varying ram pressure on spiral galaxies in clusters is explored with a new simulation method based on the N-body SPH/tree code GADGET. Methods: We have adapted the code to describe the interaction of two different gas phases, the diffuse hot intracluster medium (ICM) and the denser and colder interstellar medium (ISM). Both the ICM and ISM components are introduced as SPH particles. As a galaxy arrives on a highly radial orbit from outskirts to cluster center, it crosses the ICM density peak and experiences a time-varying wind. Results: Depending on the duration and intensity of the ISM-ICM interaction, early and late type galaxies in galaxy clusters with either a large or small ICM distribution are found to show different stripping efficiencies, amounts of reaccretion of the extra-planar ISM, and final masses. We compare the numerical results with analytical approximations of different complexity and indicate the limits of the Gunn & Gott simple stripping formula. Conclusions: Our investigations emphasize the role of the galactic orbital history to the stripping amount. We discuss the contribution of ram pressure stripping to the origin of the ICM and its metallicity. We propose gas accumulations like tails, filaments, or ripples to be responsible for stripping in regions with low overall ICM occurrence. Appendix A is only available in electronic form at http://www.aanda.org

  16. SPH numerical simulation of fluid flow through a porous media

    NASA Astrophysics Data System (ADS)

    Klapp-Escribano, Jaime; Mayoral-Villa, Estela; Rodriguez-Meza, Mario Alberto; de La Cruz-Sanchez, Eduardo; di G Sigalotti, Leonardo; Inin-Abacus Collaboration; Ivic Collaboration

    2013-11-01

    We have tested an improved a method for 3D SPH simulations of fluid flow through a porous media using an implementation of this method with the Dual-Physics code. This improvement makes it possible to simulate many particles (of the order of several million) in reasonable computer times because its execution on GPUs processors makes it possible to reduce considerably the simulation cost for large systems. Modifications in the initial configuration have been implemented in order to simulate different arrays and geometries for the porous media. The basic tests were reproduced and the performance was analyzed. Our 3D simulations of fluid flow through a saturated homogeneous porous media shows a discharge velocity proportional to the hydraulic gradient reproducing Darcy's law at small body forces. The results are comparable with values obtained in previous work and published in the literature for simulations of flow through periodic porous media. Our simulations for a non saturated porous media produce adequate qualitative results showing that a non steady state is generated. The relaxation time for these systems were obtained. Work partially supported by Cinvestav-ABACUS, CONACyT grant EDOMEX-2011-C01-165873.

  17. SPH Simulation of Impact of a Surge on a Wall

    NASA Astrophysics Data System (ADS)

    Diwakar, Manoj Kumar; Mohapatra, Pranab Kumar; Tripathi, Shivam

    2014-05-01

    Structures located on the downstream of a dam are prone to impact of the surge due to dam break flow. Ramsden (1996) experimentally studied the run-up height on a vertical wall due to propagation of bore and surge on dry bed and measured their impact on the wall. Mohapatra et al. (2000) applied Navier Stokes equations to numerically study the impact of bore on vertical and inclined walls. They also obtained the evolution of surge on dry bed. In the present work, the impact of a surge wave due to dam break flow against the wall is modeled with a two-dimensional smoothed particle hydrodynamics (SPH) model. SPH is a mesh-free method that relies on the particle view of the field problem and approximates the continuity and momentum equations on a set of particles. The method solves the strong form of Navier-Stokes equations. The governing equations are solved numerically in the vertical plane. The propagation of the surge wave, its impact and the maximum run-up on the wall located at the boundary are analyzed. Surface profile, velocity field and pressure distributions are simulated. Non-dimensional run-up height obtained from the present numerical model is 0.86 and is in good agreement with the available experimental data of Ramsden (1996) which is in the range of 0.75-0.9. Also, the simulated profile of the surge tip was comparable to the empirical equations refereed in Ramsden (1996). The model is applied to the study the maximum force and the run-up height on inclined walls with different inclinations. The results indicate that the maximum force and the run-up height on the wall increase with the increment of wall inclination. Comparison of numerical results with analytical solutions derived from shallow water equations clearly shows the breakdown of shallow water assumption during the impact. In addition to these results, the numerical simulation yields the complete velocity and pressure ?elds which may be used to design structures located in the path of a dam

  18. Realistic and efficient 2D crack simulation

    NASA Astrophysics Data System (ADS)

    Yadegar, Jacob; Liu, Xiaoqing; Singh, Abhishek

    2010-04-01

    Although numerical algorithms for 2D crack simulation have been studied in Modeling and Simulation (M&S) and computer graphics for decades, realism and computational efficiency are still major challenges. In this paper, we introduce a high-fidelity, scalable, adaptive and efficient/runtime 2D crack/fracture simulation system by applying the mathematically elegant Peano-Cesaro triangular meshing/remeshing technique to model the generation of shards/fragments. The recursive fractal sweep associated with the Peano-Cesaro triangulation provides efficient local multi-resolution refinement to any level-of-detail. The generated binary decomposition tree also provides efficient neighbor retrieval mechanism used for mesh element splitting and merging with minimal memory requirements essential for realistic 2D fragment formation. Upon load impact/contact/penetration, a number of factors including impact angle, impact energy, and material properties are all taken into account to produce the criteria of crack initialization, propagation, and termination leading to realistic fractal-like rubble/fragments formation. The aforementioned parameters are used as variables of probabilistic models of cracks/shards formation, making the proposed solution highly adaptive by allowing machine learning mechanisms learn the optimal values for the variables/parameters based on prior benchmark data generated by off-line physics based simulation solutions that produce accurate fractures/shards though at highly non-real time paste. Crack/fracture simulation has been conducted on various load impacts with different initial locations at various impulse scales. The simulation results demonstrate that the proposed system has the capability to realistically and efficiently simulate 2D crack phenomena (such as window shattering and shards generation) with diverse potentials in military and civil M&S applications such as training and mission planning.

  19. SPH-DEM simulations of grain dispersion by liquid injection

    NASA Astrophysics Data System (ADS)

    Robinson, Martin; Luding, Stefan; Ramaioli, Marco

    2013-06-01

    We study the dispersion of an initially packed, static granular bed by the injection of a liquid jet. This is a relevant system for many industrial applications, including paint dispersion or food powder dissolution. Both decompaction and dispersion of the powder are not fully understood, leading to inefficiencies in these processes. Here we consider a model problem where the liquid jet is injected below a granular bed contained in a cylindrical cell. Two different initial conditions are considered: a two-phase case where the bed is initially fully immersed in the liquid and a three-phase case where the bed and cell are completely dry preceding the injection of the liquid. The focus of this contribution is the simulation of these model problems using a two-way coupled SPH-DEM granularliquid method [M. Robinson, M. Ramaioli, and S. Luding, submitted (2013) and http://arxiv.org/abs/1301.0752 (2013)]. This is a purely particle-based method without any prescribed mesh, well suited for this and other problems involving a free (liquidgas) surface and a partly immersed particle phase. Our simulations show the effect of process parameters such as injection flow rate and injection diameter on the dispersion pattern, namely whether the granular bed is impregnated bottom-up or a jet is formed and compare well with experiments.

  20. An improved weakly compressible SPH method for simulating free surface flows of viscous and viscoelastic fluids

    NASA Astrophysics Data System (ADS)

    Xu, Xiaoyang; Deng, Xiao-Long

    2016-04-01

    In this paper, an improved weakly compressible smoothed particle hydrodynamics (SPH) method is proposed to simulate transient free surface flows of viscous and viscoelastic fluids. The improved SPH algorithm includes the implementation of (i) the mixed symmetric correction of kernel gradient to improve the accuracy and stability of traditional SPH method and (ii) the Rusanov flux in the continuity equation for improving the computation of pressure distributions in the dynamics of liquids. To assess the effectiveness of the improved SPH algorithm, a number of numerical examples including the stretching of an initially circular water drop, dam breaking flow against a vertical wall, the impact of viscous and viscoelastic fluid drop with a rigid wall, and the extrudate swell of viscoelastic fluid have been presented and compared with available numerical and experimental data in literature. The convergent behavior of the improved SPH algorithm has also been studied by using different number of particles. All numerical results demonstrate that the improved SPH algorithm proposed here is capable of modeling free surface flows of viscous and viscoelastic fluids accurately and stably, and even more important, also computing an accurate and little oscillatory pressure field.

  1. Two-way coupled SPH and particle level set fluid simulation.

    PubMed

    Losasso, Frank; Talton, Jerry; Kwatra, Nipun; Fedkiw, Ronald

    2008-01-01

    Grid-based methods have difficulty resolving features on or below the scale of the underlying grid. Although adaptive methods (e.g. RLE, octrees) can alleviate this to some degree, separate techniques are still required for simulating small-scale phenomena such as spray and foam, especially since these more diffuse materials typically behave quite differently than their denser counterparts. In this paper, we propose a two-way coupled simulation framework that uses the particle level set method to efficiently model dense liquid volumes and a smoothed particle hydrodynamics (SPH) method to simulate diffuse regions such as sprays. Our novel SPH method allows us to simulate both dense and diffuse water volumes, fully incorporates the particles that are automatically generated by the particle level set method in under-resolved regions, and allows for two way mixing between dense SPH volumes and grid-based liquid representations.

  2. Catching spiral - S0 transition in groups. Insights from SPH simulations with chemo-photometric implementation

    NASA Astrophysics Data System (ADS)

    Mazzei, P.; Marino, A.; Rampazzo, R.; Galletta, G.; Bettoni, D.

    2014-03-01

    We are investigating the co-evolution of galaxies within groups combining multi-wavelength photometric and 2D kinematical observations. Here we focus on S0s showing star formation in ring/arm-like structures. We use smooth particle hydrodynamical simulations (SPH) with chemo-photometric implementation which provide dynamical and morphological information together with the spectral energy distribution (SED) at each evolutionary stage. As test cases, we simulate the evolution of two such S0s: NGC 1533 and NGC 3626. The merging of two halos with mass ratio 2:1, initially just composed of DM and gas, well match their observed SEDs, their surface brightness profiles and their overall kinematics. The residual star formation today “rejuvenating” the ring/arm like structures in these S0s is then a mere consequence of a major merger, i.e. this is a phase during the merger episode. The peculiar kinematical features, e.g. gas-stars counter rotation in NGC 3626, depends on the halos initial impact parameters. Furthermore, our simulations allow to follow, in a fully consistent way, the transition of these S0s through the green valley in the NUV-r vs. Mr colour magnitude diagram, which they cross in about 3-5 Gyrs, before reaching their current position in the red sequence. We conclude that a viable mechanism driving the evolution of S0s in groups is of gravitational origin.

  3. Characterization of global flow and local fluctuations in 3D SPH simulations of protoplanetary discs

    NASA Astrophysics Data System (ADS)

    Arena, S. E.; Gonzalez, J.-F.

    2013-07-01

    A complete and detailed knowledge of the structure of the gaseous component in protoplanetary discs is essential to the study of dust evolution during the early phases of pre-planetesimal formation. The aim of this paper is to determine if three-dimensional accretion discs simulated by the smoothed particle hydrodynamics (SPH) method can reproduce the observational data now available and the expected turbulent nature of protoplanetary discs. The investigation is carried out by setting up a suite of diagnostic tools specifically designed to characterize both the global flow and the fluctuations of the gaseous disc. The main result concerns the role of the artificial viscosity implementation in the SPH method: in addition to the already known ability of SPH artificial viscosity to mimic a physical-like viscosity under specific conditions, we show how the same artificial viscosity prescription behaves like an implicit turbulence model. In fact, we identify a threshold for the parameters in the standard artificial viscosity above which SPH disc models present a cascade in the power spectrum of velocity fluctuations, turbulent diffusion and a mass accretion rate of the same order of magnitude as measured in observations. Furthermore, the turbulence properties observed locally in SPH disc models are accompanied by meridional circulation in the global flow of the gas, proving that the two mechanisms can coexist.

  4. Building Chondrites: SPH Simulations of a Jet Flow in a 3D Protoplanetary Disc

    NASA Astrophysics Data System (ADS)

    Pignatale, F. C.; Gonzalez, J.-F.; Cuello, N.; Bourdon, B.; Fitoussi, C.

    2016-08-01

    We present SPH simulations of jet flows in 3D discs to investigate the transport of refractory material toward the outer cold disc regions. Dust grains are captured by the disc at distances up to 40 AU, with dust aggregates mimicking chondrites.

  5. Comparing AMR and SPH Cosmological Simulations. I. Dark Matter and Adiabatic Simulations

    NASA Astrophysics Data System (ADS)

    O'Shea, Brian W.; Nagamine, Kentaro; Springel, Volker; Hernquist, Lars; Norman, Michael L.

    2005-09-01

    We compare two cosmological hydrodynamic simulation codes in the context of hierarchical galaxy formation: the Lagrangian smoothed particle hydrodynamics (SPH) code GADGET, and the Eulerian adaptive mesh refinement (AMR) code Enzo. Both codes represent dark matter with the N-body method but use different gravity solvers and fundamentally different approaches for baryonic hydrodynamics. The SPH method in GADGET uses a recently developed ``entropy conserving'' formulation of SPH, while for the mesh-based Enzo two different formulations of Eulerian hydrodynamics are employed: the piecewise parabolic method (PPM) extended with a dual energy formulation for cosmology, and the artificial viscosity-based scheme used in the magnetohydrodynamics code ZEUS. In this paper we focus on a comparison of cosmological simulations that follow either only dark matter, or also a nonradiative (``adiabatic'') hydrodynamic gaseous component. We perform multiple simulations using both codes with varying spatial and mass resolution with identical initial conditions. The dark matter-only runs agree generally quite well provided Enzo is run with a comparatively fine root grid and a low overdensity threshold for mesh refinement, otherwise the abundance of low-mass halos is suppressed. This can be readily understood as a consequence of the hierarchical particle-mesh algorithm used by Enzo to compute gravitational forces, which tends to deliver lower force resolution than the tree-algorithm of GADGET at early times before any adaptive mesh refinement takes place. At comparable force resolution we find that the latter offers substantially better performance and lower memory consumption than the present gravity solver in Enzo. In simulations that include adiabatic gasdynamics we find general agreement in the distribution functions of temperature, entropy, and density for gas of moderate to high overdensity, as found inside dark matter halos. However, there are also some significant differences in

  6. Comparative study of different SPH schemes on simulating violent water wave impact flows

    NASA Astrophysics Data System (ADS)

    Zheng, Xing; Ma, Qing-wei; Duan, Wen-yang

    2014-12-01

    Free surface flows are of significant interest in Computational Fluid Dynamics (CFD). However, violent water wave impact simulation especially when free surface breaks or impacts on solid wall can be a big challenge for many CFD techniques. Smoothed Particle Hydrodynamics (SPH) has been reported as a robust and reliable method for simulating violent free surface flows. Weakly compressible SPH (WCSPH) uses an equation of state with a large sound speed, and the results of the WCSPH can induce a noisy pressure field and spurious oscillation of pressure in time history for wave impact problem simulation. As a remedy, the truly incompressible SPH (ISPH) technique was introduced, which uses a pressure Poisson equation to calculate the pressure. Although the pressure distribution in the whole field obtained by ISPH is smooth, the stability of the techniques is still an open discussion. In this paper, a new free surface identification scheme and solid boundary handling method are introduced to improve the accuracy of ISPH. This modified ISPH is used to study dam breaking flow and violent tank sloshing flows. On the comparative study of WCSPH and ISPH, the accuracy and efficiency are assessed and the results are compared with the experimental data.

  7. Incompressible SPH Model for Simulating Violent Free-Surface Fluid Flows

    NASA Astrophysics Data System (ADS)

    Staroszczyk, Ryszard

    2014-06-01

    In this paper the problem of transient gravitational wave propagation in a viscous incompressible fluid is considered, with a focus on flows with fast-moving free surfaces. The governing equations of the problem are solved by the smoothed particle hydrodynamics method (SPH). In order to impose the incompressibility constraint on the fluid motion, the so-called projection method is applied in which the discrete SPH equations are integrated in time by using a fractional-step technique. Numerical performance of the proposed model has been assessed by comparing its results with experimental data and with results obtained by a standard (weakly compressible) version of the SPH approach. For this purpose, a plane dam-break flow problem is simulated, in order to investigate the formation and propagation of a wave generated by a sudden collapse of a water column initially contained in a rectangular tank, as well as the impact of such a wave on a rigid vertical wall. The results of simulations show the evolution of the free surface of water, the variation of velocity and pressure fields in the fluid, and the time history of pressures exerted by an impacting wave on a wall.

  8. A splitting integration scheme for the SPH simulation of concentrated particle suspensions

    NASA Astrophysics Data System (ADS)

    Bian, Xin; Ellero, Marco

    2014-01-01

    Simulating nearly contacting solid particles in suspension is a challenging task due to the diverging behavior of short-range lubrication forces, which pose a serious time-step limitation for explicit integration schemes. This general difficulty limits severely the total duration of simulations of concentrated suspensions. Inspired by the ideas developed in [S. Litvinov, M. Ellero, X.Y. Hu, N.A. Adams, J. Comput. Phys. 229 (2010) 5457-5464] for the simulation of highly dissipative fluids, we propose in this work a splitting integration scheme for the direct simulation of solid particles suspended in a Newtonian liquid. The scheme separates the contributions of different forces acting on the solid particles. In particular, intermediate- and long-range multi-body hydrodynamic forces, which are computed from the discretization of the Navier-Stokes equations using the smoothed particle hydrodynamics (SPH) method, are taken into account using an explicit integration; for short-range lubrication forces, velocities of pairwise interacting solid particles are updated implicitly by sweeping over all the neighboring pairs iteratively, until convergence in the solution is obtained. By using the splitting integration, simulations can be run stably and efficiently up to very large solid particle concentrations. Moreover, the proposed scheme is not limited to the SPH method presented here, but can be easily applied to other simulation techniques employed for particulate suspensions.

  9. SPH-based numerical simulations of flow slides in municipal solid waste landfills.

    PubMed

    Huang, Yu; Dai, Zili; Zhang, Weijie; Huang, Maosong

    2013-03-01

    Most municipal solid waste (MSW) is disposed of in landfills. Over the past few decades, catastrophic flow slides have occurred in MSW landfills around the world, causing substantial economic damage and occasionally resulting in human victims. It is therefore important to predict the run-out, velocity and depth of such slides in order to provide adequate mitigation and protection measures. To overcome the limitations of traditional numerical methods for modelling flow slides, a mesh-free particle method entitled smoothed particle hydrodynamics (SPH) is introduced in this paper. The Navier-Stokes equations were adopted as the governing equations and a Bingham model was adopted to analyse the relationship between material stress rates and particle motion velocity. The accuracy of the model is assessed using a series of verifications, and then flow slides that occurred in landfills located in Sarajevo and Bandung were simulated to extend its applications. The simulated results match the field data well and highlight the capability of the proposed SPH modelling method to simulate such complex phenomena as flow slides in MSW landfills.

  10. Incompressible SPH method based on Rankine source solution for violent water wave simulation

    NASA Astrophysics Data System (ADS)

    Zheng, X.; Ma, Q. W.; Duan, W. Y.

    2014-11-01

    With wide applications, the smoothed particle hydrodynamics method (abbreviated as SPH) has become an important numerical tool for solving complex flows, in particular those with a rapidly moving free surface. For such problems, the incompressible Smoothed Particle Hydrodynamics (ISPH) has been shown to yield better and more stable pressure time histories than the traditional SPH by many papers in literature. However, the existing ISPH method directly approximates the second order derivatives of the functions to be solved by using the Poisson equation. The order of accuracy of the method becomes low, especially when particles are distributed in a disorderly manner, which generally happens for modelling violent water waves. This paper introduces a new formulation using the Rankine source solution. In the new approach to the ISPH, the Poisson equation is first transformed into another form that does not include any derivative of the functions to be solved, and as a result, does not need to numerically approximate derivatives. The advantage of the new approach without need of numerical approximation of derivatives is obvious, potentially leading to a more robust numerical method. The newly formulated method is tested by simulating various water waves, and its convergent behaviours are numerically studied in this paper. Its results are compared with experimental data in some cases and reasonably good agreement is achieved. More importantly, numerical results clearly show that the newly developed method does need less number of particles and so less computational costs to achieve the similar level of accuracy, or to produce more accurate results with the same number of particles compared with the traditional SPH and existing ISPH when it is applied to modelling water waves.

  11. Parallel peridynamics-SPH simulation of explosion induced soil fragmentation by using OpenMP

    NASA Astrophysics Data System (ADS)

    Fan, Houfu; Li, Shaofan

    2016-06-01

    In this work, we use the OpenMP-based shared-memory parallel programming to implement the recently developed coupling method of state-based peridynamics and smoothed particle hydrodynamics (PD-SPH), and we then employ the program to simulate dynamic soil fragmentation induced by the explosion of the buried explosives. The paper offers detailed technical description and discussion on the PD-SHP coupling algorithm and how to use the OpenMP shared-memory programming to implement such large-scale computation in a desktop environment, with an example to illustrate the basic computing principle and the parallel algorithm structure. In specific, the paper provides a complete OpenMP parallel algorithm for the PD-SPH scheme with the programming and parallelization details. Numerical examples of soil fragmentation caused by the buried explosives are also presented. Results show that the simulation carried out by the OpenMP parallel code is much faster than that by the corresponding serial computer code.

  12. X-ray Modeling of η Carinae & WR140 from SPH Simulations

    NASA Astrophysics Data System (ADS)

    Russell, Christopher M. P.; Corcoran, Michael F.; Okazaki, Atsuo T.; Madura, Thomas I.; Owocki, Stanley P.

    2011-01-01

    The colliding wind binary (CWB) systems η Carinae and WR140 provide unique laboratories for X-ray astrophysics. Their wind-wind collisions produce hard X-rays that have been monitored extensively by several X-ray telescopes, including RXTE. To interpret these RXTE X-ray light curves, we model the wind-wind collision using 3D smoothed particle hydrodynamics (SPH) simulations. Adiabatic simulations that account for the emission and absorption of X-rays from an assumed point source at the apex of the wind-collision shock cone by the distorted winds can closely match the observed 2-10keV RXTE light curves of both η Car and WR140. This point-source model can also explain the early recovery of η Car's X-ray light curve from the 2009.0 minimum by a factor of 2-4 reduction in the mass loss rate of η Car. Our more recent models relax the point-source approximation and account for the spatially extended emission along the wind-wind interaction shock front. For WR140, the computed X-ray light curve again matches the RXTE observations quite well. But for η Car, a hot, post-periastron bubble leads to an emission level that does not match the extended X-ray minimum observed by RXTE. Initial results from incorporating radiative cooling and radiatively-driven wind acceleration via a new anti-gravity approach into the SPH code are also discussed.

  13. Simulating MEMS Chevron Actuator for Strain Engineering 2D Materials

    NASA Astrophysics Data System (ADS)

    Vutukuru, Mounika; Christopher, Jason; Bishop, David; Swan, Anna

    2D materials pose an exciting paradigm shift in the world of electronics. These crystalline materials have demonstrated high electric and thermal conductivities and tensile strength, showing great potential as the new building blocks of basic electronic circuits. However, strain engineering 2D materials for novel devices remains a difficult experimental feat. We propose the integration of 2D materials with MEMS devices to investigate the strain dependence on material properties such as electrical and thermal conductivity, refractive index, mechanical elasticity, and band gap. MEMS Chevron actuators, provides the most accessible framework to study strain in 2D materials due to their high output force displacements for low input power. Here, we simulate Chevron actuators on COMSOL to optimize actuator design parameters and accurately capture the behavior of the devices while under the external force of a 2D material. Through stationary state analysis, we analyze the response of the device through IV characteristics, displacement and temperature curves. We conclude that the simulation precisely models the real-world device through experimental confirmation, proving that the integration of 2D materials with MEMS is a viable option for constructing novel strain engineered devices. The authors acknowledge support from NSF DMR1411008.

  14. SPH Simulations of Star Formation in the Eagle Nebula (M16)

    NASA Astrophysics Data System (ADS)

    Morgan, Larry; Miao, Jingqi; Thompson, Mark; White, Glenn

    We present 3D-SPH simulations of triggered star formation at the tips of the well-observed Eagle Nebula in order to understand induced star formation by radiation fields, to gain an overview about the evolutionary processes occurring at the tips of these "elephant trunks". We attempt to answer questions such as: are the tips of the Eagle Nebula trunks starting the final stages of collapse? Or are the structures seen in M16 in a near-steady state? The modelling is based on an existing SPH code, which includes a large chemical network, refined chemical and dust properties, and has been upgraded to include the interaction of an external radiation field with molecular clouds as well as relative abundances of molecular species subject to different boundary and initial conditions. We investigate the effects of the initial density distribution and chaotic motion of the molecular clouds on the dynamical collapse of their cores. The role of the radiation field flux strength in triggering star formation at the tips of these elephant trunks is examined in order to explain the observed star formation.

  15. 3D SPH numerical simulation of the wave generated by the Vajont rockslide

    NASA Astrophysics Data System (ADS)

    Vacondio, R.; Mignosa, P.; Pagani, S.

    2013-09-01

    A 3D numerical modeling of the wave generated by the Vajont slide, one of the most destructive ever occurred, is presented in this paper. A meshless Lagrangian Smoothed Particle Hydrodynamics (SPH) technique was adopted to simulate the highly fragmented violent flow generated by the falling slide in the artificial reservoir. The speed-up achievable via General Purpose Graphic Processing Units (GP-GPU) allowed to adopt the adequate resolution to describe the phenomenon. The comparison with the data available in literature showed that the results of the numerical simulation reproduce satisfactorily the maximum run-up, also the water surface elevation in the residual lake after the event. Moreover, the 3D velocity field of the flow during the event and the discharge hydrograph which overtopped the dam, were obtained.

  16. FEM/SPH simulation research and experiment of surface roughness based on traditional polishing process

    NASA Astrophysics Data System (ADS)

    Li-Jun, Shen; Yong-Jian, Wan; Kai, Meng; Chuan-Ke, Huang

    2015-06-01

    Surface roughness is one of the most important parameters of surface quality and a difficult technical issue in glass polishing, especially for traditional polishing. In this paper, the coupled algorithm of FEM/SPH has been used to simulate the deformation of brittle K9 glass in traditional polishing. The influences of polishing particle size and insert depth on surface roughness are analyzed in detail. Then, experiment is carried out on a ∅100 mm flat K9 mirror with three sorts of particle, ceria abrasive particle with 1.2, 1.6 and 2 μm. Simulation and experiment results show that surface roughness of brittle glass has direct relationship with particle size during traditional polishing process. The surface roughness is better as the particle size is smaller.

  17. N-body simulations of the Carina dSph in MOND

    NASA Astrophysics Data System (ADS)

    Angus, G. W.; Gentile, G.; Diaferio, A.; Famaey, B.; van der Heyden, K. J.

    2014-05-01

    The classical dwarf spheroidals (dSphs) provide a critical test for Modified Newtonian Dynamics (MOND) because they are observable satellite galactic systems with low internal accelerations and low, but periodically varying, external acceleration. This varying external gravitational field is not commonly found acting on systems with low internal acceleration. Using Jeans modelling, Carina in particular has been demonstrated to require a V-band mass-to-light ratio greater than 5, which is the nominal upper limit for an ancient stellar population. We run MOND N-body simulations of a Carina-like dSph orbiting the Milky Way to test if dSphs in MOND are stable to tidal forces over the Hubble time and if those same tidal forces artificially inflate their velocity dispersions and therefore their apparent mass-to-light ratio. We run many simulations with various initial total masses for Carina and Galactocentric orbits (consistent with proper motions), and compare the simulation line-of-sight velocity dispersions (losVDs) with the observed losVDs of Walker et al. We find that the dSphs are stable, but that the tidal forces are not conducive to artificially inflating the losVDs. Furthermore, the range of mass-to-light ratios that best reproduces the observed losVDs of Carina is 5.3 to 5.7 and circular orbits are preferred to plunging orbits. Therefore, some tension still exists between the required mass-to-light ratio for the Carina dSph in MOND and those expected from stellar population synthesis models. It remains to be seen whether a careful treatment of the binary population or triaxiality might reduce this tension.

  18. Lahar simulation with SPH and field calibration at the Colima Volcano (Mexico)

    NASA Astrophysics Data System (ADS)

    Calvo, Leticia; Haddad, Bouchra; Capra, Lucia; Palacios, David

    2015-04-01

    As a result of the frequent effusive activity of Volcán de Colima (10° 30'44''N, 103° 37'02'' W), the most active volcano in Mexico, plenty of rain triggered lahars are produced, especially during the rainy season. Along the recent period of activity, particularly from 2010, many of these lahars channelled through the main ravines of the volcano and reach large distances, representing high risk for more than 10,000 people at the surroundings. Modeling of lahars has become an important tool in the assessment of the related hazards, in order to undertake appropriate mitigation actions and reduce the associated risks. Recent lahars at the Colima Volcano are well documented, so they can be used to prove the accuracy of modelling. In this work, we used the SPH (Smoothed Particle Hydrodynamics) method, a depth integrated coupled model created by Pastor in 2005, to replicate the propagation stage of 3 recent Colima lahars occurred on Montegrande ravine in 1992, 2011 and 2012. The studied events include hyperconcentrated, debris and a mixture of the previous flow natures. The inputs used for the SPH simulations were the initial point, volume of each lahar and an adapted morphology of its mass. Field data used to verify the SPH results include the stopping point of the lahar, its path, velocity and height values, as the floodplain area. All this information was a result of fieldwork recognition (cross section profiles of the inner part of the ravine) and free satellite imagery analysis. The best results were obtained using Bingham rheology. The proposed parameters to simulate Colima lahars were 20 Pa of yield strength and 30 Pa.s of viscosity for the 1992 lahar (hyperconcentrated flow), 200 Pa and 50 Pa.s in case of the 2011 debris flow, and finally 20 Pa and 24 Pa.s for the 2012 event, whose nature evolved from debris to an hyperconcentrated flow. In all cases a 1900 kg/m3 density was used. Highly accurate results showed the relevant role played by rheological

  19. The Formation of Asteroid Satellites: Numerical Simulations Using SPH and N-body Models

    NASA Astrophysics Data System (ADS)

    Durda, D. D.; Bottke, W. F.; Asphaug, E.; Richardson, D. C.

    2001-11-01

    The exciting discoveries of what is now a growing suite of asteroid satellites have renewed interest in the diversity of collisional mechanisms that may lead to the formation of small-body satellites and binary pairs. Understanding how asteroid satellites form is important because they hold important clues to the collisional environment of the asteroid population, and models of their formation may provide constraints on internal structures of asteroids beyond those possible from observations of satellite orbital properties alone. Since collisions are the dominant evolutionary process affecting asteroids, it is plausible that these satellites are by-products of cratering and/or catastrophic disruption events. Basic analytic arguments and preliminary numerical investigations have identified several collisional processes as plausible formation mechanisms; these include: (1) mutual capture following catastrophic disruption, (2) rotational fission due to glancing impact and spin-up, and (3) reaccretion in orbit of ejecta from large, non-catastrophic impacts. We will present initial results, focused on scenario (1), from a planned systematic investigation directed toward mapping out the parameter space of these three collisional mechanisms. Our work takes advantage of state-of-the-art numerical tools that have not been applied in previous asteroid satellite work. These include: (1) smooth-particle hydrodynamics (SPH) codes, which accurately model the pressures, temperatures, and energies of asteroid-asteroid impacts, and (2) efficient N-body codes which can track the trajectories of tens-of-thousands of individual collision fragments in an expedient manner. Simulations using SPH codes are used to model the various impact phases between colliding asteroids. Once the relevant portions of the impact phase are complete (crater formation/ejecta flow fields established with no further fragmentation/damage), the outcomes of the SPH models are handed off as the initial

  20. The UV window on counter rotating ETGs: insight from SPH simulations with chemo-photometric implementation

    NASA Astrophysics Data System (ADS)

    Bettoni, D.; Mazzei, P.; Rampazzo, R.; Marino, A.; Galletta, G.; Buson, L. M.

    2014-11-01

    The Galaxy Evolution Explorer ( GALEX) detected ultraviolet emission in about 50 % of multi-spin early-type galaxies (ETGs), suggesting the occurrence of a recent rejuvenation episode connected to the formation of these kinematical features. With the aim at investigating the complex evolutionary scenario leading to the formation of counter rotating ETGs (CR-ETGs) we use our Smooth Particle Hydrodynamic (SPH) code with chemo-photometric implementation. We discuss here the UV evolutionary path of two CR-ETGs, NGC 3593 and NGC 5173, concurrently best fitting their global observed properties, i.e., morphology, dynamics, as well as their total B-band absolute magnitude and spectral energy distribution (SED) extended over three orders of magnitude in wavelength. These simulations correspond to our predictions about the target evolution which we follow in the color-magnitude diagram (CMD), near-UV (NUV) versus r-band absolute magnitude, as a powerful diagnostic tool to emphasize rejuvenation episodes.

  1. SPH Simulation of Liquid Scattering from the Edge of a Rotary Atomizer

    NASA Astrophysics Data System (ADS)

    Izawa, Seiichiro; Ito, Takuya; Shigeta, Masaya; Fukunishi, Yu

    2013-11-01

    Three-dimensional incompressible SPH method is used to simulate the behavior of liquid scattering from the edge of a rotary atomizer. Rotary atomizers have been widely used for spraying, painting and coating, for instance, in the automobile industry. However, how the spray droplets are formed after leaving the edge of the rotary atomizer is not well understood, because the scale of the phenomenon is very small and the speed of rotation is very fast. The present computational result shows that while the liquid forms a film on the surface of the rotating disk of the atomizer, it quickly deforms into many thin columns after leaving the disk edge, and these columns soon break up into fine droplets which spread out in the radial direction. The size of droplets tends to become smaller with the increase in the disk rotating speed. The results show good agreement with the experimental observations.

  2. Simulation of 2D Fields of Raindrop Size Distributions

    NASA Astrophysics Data System (ADS)

    Berne, A.; Schleiss, M.; Uijlenhoet, R.

    2008-12-01

    The raindrop size distribution (DSD hereafter) is of primary importance for quantitative applications of weather radar measurements. The radar reflectivity~Z (directly measured by radar) is related to the power backscattered by the ensemble of hydrometeors within the radar sampling volume. However, the rain rate~R (the flux of water to the surface) is the variable of interest for many applications (hydrology, weather forecasting, air traffic for example). Usually, radar reflectivity is converted into rain rate using a power law such as Z=aRb. The coefficients a and b of the Z-R relationship depend on the DSD. The variability of the DSD in space and time has to be taken into account to improve radar rain rate estimates. Therefore, the ability to generate a large number of 2D fields of DSD which are statistically homogeneous provides a very useful simulation framework that nicely complements experimental approaches based on DSD data, in order to investigate radar beam propagation through rain as well as radar retrieval techniques. The proposed approach is based on geostatistics for structural analysis and stochastic simulation. First, the DSD is assumed to follow a gamma distribution. Hence a 2D field of DSDs can be adequately described as a 2D field of a multivariate random function consisting of the three DSD parameters. Such fields are simulated by combining a Gaussian anamorphosis and a multivariate Gaussian random field simulation algorithm. Using the (cross-)variogram models fitted on data guaranties that the spatial structure of the simulated fields is consistent with the observed one. To assess its validity, the proposed method is applied to data collected during intense Mediterranean rainfall. As only time series are available, Taylor's hypothesis is assumed to convert time series in 1D range profile. Moreover, DSD fields are assumed to be isotropic so that the 1D structure can be used to simulate 2D fields. A large number of 2D fields of DSD parameters are

  3. Development of a coupled discrete element (DEM)-smoothed particle hydrodynamics (SPH) simulation method for polyhedral particles

    NASA Astrophysics Data System (ADS)

    Nassauer, Benjamin; Liedke, Thomas; Kuna, Meinhard

    2016-03-01

    In the present paper, the direct coupling of a discrete element method (DEM) with polyhedral particles and smoothed particle hydrodynamics (SPH) is presented. The two simulation techniques are fully coupled in both ways through interaction forces between the solid DEM particles and the fluid SPH particles. Thus this simulation method provides the possibility to simulate the individual movement of polyhedral, sharp-edged particles as well as the flow field around these particles in fluid-saturated granular matter which occurs in many technical processes e.g. wire sawing, grinding or lapping. The coupled method is exemplified and validated by the simulation of a particle in a shear flow, which shows good agreement with analytical solutions.

  4. Dynamic simulations of geologic materials using combined FEM/DEM/SPH analysis

    SciTech Connect

    Morris, J P; Johnson, S M

    2008-03-26

    An overview of the Lawrence Discrete Element Code (LDEC) is presented, and results from a study investigating the effect of explosive and impact loading on geologic materials using the Livermore Distinct Element Code (LDEC) are detailed. LDEC was initially developed to simulate tunnels and other structures in jointed rock masses using large numbers of polyhedral blocks. Many geophysical applications, such as projectile penetration into rock, concrete targets, and boulder fields, require a combination of continuum and discrete methods in order to predict the formation and interaction of the fragments produced. In an effort to model this class of problems, LDEC now includes implementations of Cosserat point theory and cohesive elements. This approach directly simulates the transition from continuum to discontinuum behavior, thereby allowing for dynamic fracture within a combined finite element/discrete element framework. In addition, there are many application involving geologic materials where fluid-structure interaction is important. To facilitate solution of this class of problems a Smooth Particle Hydrodynamics (SPH) capability has been incorporated into LDEC to simulate fully coupled systems involving geologic materials and a saturating fluid. We will present results from a study of a broad range of geomechanical problems that exercise the various components of LDEC in isolation and in tandem.

  5. Simulations of Fracture and Fragmentation of Geologic Materials using Combined FEM/DEM/SPH Analysis

    SciTech Connect

    Morris, J P; Johnson, S M

    2007-04-05

    An overview of the Lawrence Discrete Element Code (LDEC) is presented, and results from a study investigating the effect of explosive and impact loading on geologic materials using the Livermore Distinct Element Code (LDEC) are detailed. LDEC was initially developed to simulate tunnels and other structures in jointed rock masses using large numbers of polyhedral blocks. Many geophysical applications, such as projectile penetration into rock, concrete targets, and boulder fields, require a combination of continuum and discrete methods in order to predict the formation and interaction of the fragments produced. In an effort to model this class of problems, LDEC now includes implementations of Cosserat point theory and cohesive elements. This approach directly simulates the transition from continuum to discontinuum behavior, thereby allowing for dynamic fracture within a combined finite element/discrete element framework. In addition, a Smooth Particle Hydrodynamics (SPH) capability has been incorporated into LDEC, permitting the simulation of fluid-structure interaction. We will present results from a study of detonation-induced fracture and fragmentation of geologic media surrounding a tunnel using LDEC.

  6. SPH simulations of WBC adhesion to the endothelium: the role of haemodynamics and endothelial binding kinetics.

    PubMed

    Gholami, Babak; Comerford, Andrew; Ellero, Marco

    2015-11-01

    A multiscale Lagrangian particle solver introduced in our previous work is extended to model physiologically realistic near-wall cell dynamics. Three-dimensional simulation of particle trajectories is combined with realistic receptor-ligand adhesion behaviour to cover full cell interactions in the vicinity of the endothelium. The selected stochastic adhesion model, which is based on a Monte Carlo acceptance-rejection method, fits in our Lagrangian framework and does not compromise performance. Additionally, appropriate inflow/outflow boundary conditions are implemented for our SPH solver to enable realistic pulsatile flow simulation. The model is tested against in-vitro data from a 3D geometry with a stenosis and sudden expansion. In both steady and pulsatile flow conditions, results show close agreement with the experimental ones. Furthermore we demonstrate, in agreement with experimental observations, that haemodynamics alone does not account for adhesion of white blood cells, in this case U937 monocytic human cells. Our findings suggest that the current framework is fully capable of modelling cell dynamics in large arteries in a realistic and efficient manner.

  7. Simulating non-Newtonian flows with the moving particle semi-implicit method with an SPH kernel

    NASA Astrophysics Data System (ADS)

    Xiang, Hao; Chen, Bin

    2015-02-01

    The moving particle semi-implicit (MPS) method and smoothed particle hydrodynamics (SPH) are commonly used mesh-free particle methods for free surface flows. The MPS method has superiority in incompressible flow simulation and simple programing. However, the crude kernel function is not accurate enough for the discretization of the divergence of the shear stress tensor by the particle inconsistency when the MPS method is extended to non-Newtonian flows. This paper presents an improved MPS method with an SPH kernel to simulate non-Newtonian flows. To improve the consistency of the partial derivative, the SPH cubic spline kernel and the Taylor series expansion are combined with the MPS method. This approach is suitable for all non-Newtonian fluids that can be described with τ = μ(|γ|) Δ (where τ is the shear stress tensor, μ is the viscosity, |γ| is the shear rate, and Δ is the strain tensor), e.g., the Casson and Cross fluids. Two examples are simulated including the Newtonian Poiseuille flow and container filling process of the Cross fluid. The results of Poiseuille flow are more accurate than the traditional MPS method, and different filling processes are obtained with good agreement with previous results, which verified the validation of the new algorithm. For the Cross fluid, the jet fracture length can be correlated with We0.28Fr0.78 (We is the Weber number, Fr is the Froude number).

  8. Numerical simulation of rock cutting using 2D AUTODYN

    NASA Astrophysics Data System (ADS)

    Woldemichael, D. E.; Rani, A. M. Abdul; Lemma, T. A.; Altaf, K.

    2015-12-01

    In a drilling process for oil and gas exploration, understanding of the interaction between the cutting tool and the rock is important for optimization of the drilling process using polycrystalline diamond compact (PDC) cutters. In this study the finite element method in ANSYS AUTODYN-2D is used to simulate the dynamics of cutter rock interaction, rock failure, and fragmentation. A two-dimensional single PDC cutter and rock model were used to simulate the orthogonal cutting process and to investigate the effect of different parameters such as depth of cut, and back rake angle on two types of rocks (sandstone and limestone). In the simulation, the cutting tool was dragged against stationary rock at predetermined linear velocity and the depth of cut (1,2, and 3 mm) and the back rake angles(-10°, 0°, and +10°) were varied. The simulation result shows that the +10° back rake angle results in higher rate of penetration (ROP). Increasing depth of cut leads to higher ROP at the cost of higher cutting force.

  9. EvoL: the new Padova Tree-SPH parallel code for cosmological simulations. I. Basic code: gravity and hydrodynamics

    NASA Astrophysics Data System (ADS)

    Merlin, E.; Buonomo, U.; Grassi, T.; Piovan, L.; Chiosi, C.

    2010-04-01

    Context. We present the new release of the Padova N-body code for cosmological simulations of galaxy formation and evolution, EvoL. The basic Tree + SPH code is presented and analysed, together with an overview of the software architectures. Aims: EvoL is a flexible parallel Fortran95 code, specifically designed for simulations of cosmological structure formations on cluster, galactic and sub-galactic scales. Methods: EvoL is a fully Lagrangian self-adaptive code, based on the classical oct-tree by Barnes & Hut (1986, Nature, 324, 446) and on the smoothed particle hydrodynamics algorithm (SPH, Lucy 1977, AJ, 82, 1013). It includes special features like adaptive softening lengths with correcting extra-terms, and modern formulations of SPH and artificial viscosity. It is designed to be run in parallel on multiple CPUs to optimise the performance and save computational time. Results: We describe the code in detail, and present the results of a number of standard hydrodynamical tests.

  10. Kinetic AGN feedback effects on cluster cool cores simulated using SPH

    NASA Astrophysics Data System (ADS)

    Barai, Paramita; Murante, Giuseppe; Borgani, Stefano; Gaspari, Massimo; Granato, Gian Luigi; Monaco, Pierluigi; Ragone-Figueroa, Cinthia

    2016-09-01

    We implement novel numerical models of AGN feedback in the SPH code GADGET-3, where the energy from a supermassive black hole (BH) is coupled to the surrounding gas in the kinetic form. Gas particles lying inside a bi-conical volume around the BH are imparted a one-time velocity (10 000 km s-1) increment. We perform hydrodynamical simulations of isolated cluster (total mass 1014 h-1 M⊙), which is initially evolved to form a dense cool core, having central T ≤ 106 K. A BH resides at the cluster centre, and ejects energy. The feedback-driven fast wind undergoes shock with the slower moving gas, which causes the imparted kinetic energy to be thermalized. Bipolar bubble-like outflows form propagating radially outward to a distance of a few 100 kpc. The radial profiles of median gas properties are influenced by BH feedback in the inner regions (r < 20-50 kpc). BH kinetic feedback, with a large value of the feedback efficiency, depletes the inner cool gas and reduces the hot gas content, such that the initial cool core of the cluster is heated up within a time 1.9 Gyr, whereby the core median temperature rises to above 107 K, and the central entropy flattens. Our implementation of BH thermal feedback (using the same efficiency as kinetic), within the star formation model, cannot do this heating, where the cool core remains. The inclusion of cold gas accretion in the simulations produces naturally a duty cycle of the AGN with a periodicity of 100 Myr.

  11. Quantum Simulation with 2D Arrays of Trapped Ions

    NASA Astrophysics Data System (ADS)

    Richerme, Philip

    2016-05-01

    The computational difficulty of solving fully quantum many-body spin problems is a significant obstacle to understanding the behavior of strongly correlated quantum matter. This work proposes the design and construction of a 2D quantum spin simulator to investigate the physics of frustrated materials, highly entangled states, mechanisms potentially underpinning high-temperature superconductivity, and other topics inaccessible to current 1D systems. The effective quantum spins will be encoded within the well-isolated electronic levels of trapped ions, confined in a two-dimensional planar geometry, and made to interact using phonon-mediated optical dipole forces. The system will be scalable to 100+ quantum particles, far beyond the realm of classical intractability, while maintaining individual-ion control, long quantum coherence times, and site-resolved projective spin measurements. Once constructed, the two-dimensional quantum simulator will implement a broad range of spin models on a variety of reconfigurable lattices and characterize their behavior through measurements of spin-spin correlations and entanglement. This versatile tool will serve as an important experimental resource for exploring difficult quantum many-body problems in a regime where classical methods fail.

  12. Numerical simulation and experimental validation of biofilm in a multi-physics framework using an SPH based method

    NASA Astrophysics Data System (ADS)

    Soleimani, Meisam; Wriggers, Peter; Rath, Henryke; Stiesch, Meike

    2016-10-01

    In this paper, a 3D computational model has been developed to investigate biofilms in a multi-physics framework using smoothed particle hydrodynamics (SPH) based on a continuum approach. Biofilm formation is a complex process in the sense that several physical phenomena are coupled and consequently different time-scales are involved. On one hand, biofilm growth is driven by biological reaction and nutrient diffusion and on the other hand, it is influenced by fluid flow causing biofilm deformation and interface erosion in the context of fluid and deformable solid interaction. The geometrical and numerical complexity arising from these phenomena poses serious complications and challenges in grid-based techniques such as finite element. Here the solution is based on SPH as one of the powerful meshless methods. SPH based computational modeling is quite new in the biological community and the method is uniquely robust in capturing the interface-related processes of biofilm formation such as erosion. The obtained results show a good agreement with experimental and published data which demonstrates that the model is capable of simulating and predicting overall spatial and temporal evolution of biofilm.

  13. Numerical simulation and experimental validation of biofilm in a multi-physics framework using an SPH based method

    NASA Astrophysics Data System (ADS)

    Soleimani, Meisam; Wriggers, Peter; Rath, Henryke; Stiesch, Meike

    2016-06-01

    In this paper, a 3D computational model has been developed to investigate biofilms in a multi-physics framework using smoothed particle hydrodynamics (SPH) based on a continuum approach. Biofilm formation is a complex process in the sense that several physical phenomena are coupled and consequently different time-scales are involved. On one hand, biofilm growth is driven by biological reaction and nutrient diffusion and on the other hand, it is influenced by fluid flow causing biofilm deformation and interface erosion in the context of fluid and deformable solid interaction. The geometrical and numerical complexity arising from these phenomena poses serious complications and challenges in grid-based techniques such as finite element. Here the solution is based on SPH as one of the powerful meshless methods. SPH based computational modeling is quite new in the biological community and the method is uniquely robust in capturing the interface-related processes of biofilm formation such as erosion. The obtained results show a good agreement with experimental and published data which demonstrates that the model is capable of simulating and predicting overall spatial and temporal evolution of biofilm.

  14. Comparisons Between SPH and Grid-Based Simulations of the Common Envelope Phase

    NASA Astrophysics Data System (ADS)

    Passy, Jean-Claude; Fryer, C. L.; Diehl, S.; De Marco, O.; Mac Low, M.; Herwig, F.; Oishi, J. S.

    2011-01-01

    The common envelope (CE) interaction between a giant star and a lower-mass companion provides a formation channel leading eventually to Type Ia supernovae, sdB stars and bipolar PNe. More broadly, it is an essential ingredient for any population synthesis study including binaries, e.g. cataclysmic variables. Occurring on a short time scale - typically between one and ten years, the CE interaction itself has so far never been observed with certainty but the existence of companions in close orbits around evolved stars, whose precursor's radius was larger than today's orbital separation, vouches for such interaction taking place frequently. Via a detailed study of the energetics and the use of stellar evolution models, we derived in our previous paper the efficiency α of the CE interaction from a carefully selected and statistically analyzed sample of systems thought to be outcomes of a CE interaction. We deduced the initial configuration of those systems using stellar models, and derived a possible inverse dependence of α with the companion to primary mass ratio. Here, we compare these predictions to numerical simulations with two different codes. Enzo is a 3D adaptive mesh refinement grid-based code. For our stellar problem we have modified the way gravity and boundary conditions are treated in this code. The SNSPH code is a 3D hydrodynamics SPH code using tree gravity. The results from both codes for different companion masses and different types of primary stars are consistent with each other. Those results include a resolution study of a 0.88 M⊙ red giant interacting with a 0.9, 0.6 and 0.3 M⊙ white dwarf, respectively. Those systems reach a final separation of 25, 18 and 10 R⊙, respectively. In this contribution, we present and discuss those results and compare them to our predictions. This research was funded by NSF grant 0607111.

  15. A 2D simulation model for urban flood management

    NASA Astrophysics Data System (ADS)

    Price, Roland; van der Wielen, Jonathan; Velickov, Slavco; Galvao, Diogo

    2014-05-01

    The European Floods Directive, which came into force on 26 November 2007, requires member states to assess all their water courses and coast lines for risk of flooding, to map flood extents and assets and humans at risk, and to take adequate and coordinated measures to reduce the flood risk in consultation with the public. Flood Risk Management Plans are to be in place by 2015. There are a number of reasons for the promotion of this Directive, not least because there has been much urban and other infrastructural development in flood plains, which puts many at risk of flooding along with vital societal assets. In addition there is growing awareness that the changing climate appears to be inducing more frequent extremes of rainfall with a consequent increases in the frequency of flooding. Thirdly, the growing urban populations in Europe, and especially in the developing countries, means that more people are being put at risk from a greater frequency of urban flooding in particular. There are urgent needs therefore to assess flood risk accurately and consistently, to reduce this risk where it is important to do so or where the benefit is greater than the damage cost, to improve flood forecasting and warning, to provide where necessary (and possible) flood insurance cover, and to involve all stakeholders in decision making affecting flood protection and flood risk management plans. Key data for assessing risk are water levels achieved or forecasted during a flood. Such levels should of course be monitored, but they also need to be predicted, whether for design or simulation. A 2D simulation model (PriceXD) solving the shallow water wave equations is presented specifically for determining flood risk, assessing flood defense schemes and generating flood forecasts and warnings. The simulation model is required to have a number of important properties: -Solve the full shallow water wave equations using a range of possible solutions; -Automatically adjust the time step and

  16. 2D and 3D Numerical Simulations of Flux Cancellation

    NASA Technical Reports Server (NTRS)

    Karpen, Judith T.; DeVore, C.; Antiochos, S. K.; Linton, M. G.

    2009-01-01

    Cancellation of magnetic flux in the solar photosphere and chromosphere has been linked observationally and theoretically to a broad range of solar activity, from filament channel formation to CME initiation. Because this phenomenon is typically measured at only a single layer in the atmosphere, in the radial (line of sight) component of the magnetic field, the actual processes behind this observational signature are ambiguous. It is clear that reconnection is involved in some way, but the location of the reconnection sites and associated connectivity changes remain uncertain in most cases. We are using numerical modeling to demystify flux cancellation, beginning with the simplest possible configuration: a subphotospheric Lundquist flux tube surrounded by a potential field, immersed in a gravitationally stratified atmosphere, spanning many orders of magnitude in plasma beta. In this system, cancellation is driven slowly by a 2-cell circulation pattern imposed in the convection zone, such that the tops of the cells are located around the beta=1 level (i.e., the photosphere) and the flows converge and form a downdraft at the polarity inversion line; note however that no flow is imposed along the neutral line. We will present the results of 2D and 3D MHD-AMR simulations of flux cancellation, in which the flux at the photosphere begins in either an unsheared or sheared state. In all cases, a low-lying flux rope is formed by reconnection at the polarity inversion line within a few thousand seconds. The flux rope remains stable and does not rise, however, in contrast to models which do not include the presence of significant mass loading.

  17. A 2D simulation model for urban flood management

    NASA Astrophysics Data System (ADS)

    Price, Roland; van der Wielen, Jonathan; Velickov, Slavco; Galvao, Diogo

    2014-05-01

    The European Floods Directive, which came into force on 26 November 2007, requires member states to assess all their water courses and coast lines for risk of flooding, to map flood extents and assets and humans at risk, and to take adequate and coordinated measures to reduce the flood risk in consultation with the public. Flood Risk Management Plans are to be in place by 2015. There are a number of reasons for the promotion of this Directive, not least because there has been much urban and other infrastructural development in flood plains, which puts many at risk of flooding along with vital societal assets. In addition there is growing awareness that the changing climate appears to be inducing more frequent extremes of rainfall with a consequent increases in the frequency of flooding. Thirdly, the growing urban populations in Europe, and especially in the developing countries, means that more people are being put at risk from a greater frequency of urban flooding in particular. There are urgent needs therefore to assess flood risk accurately and consistently, to reduce this risk where it is important to do so or where the benefit is greater than the damage cost, to improve flood forecasting and warning, to provide where necessary (and possible) flood insurance cover, and to involve all stakeholders in decision making affecting flood protection and flood risk management plans. Key data for assessing risk are water levels achieved or forecasted during a flood. Such levels should of course be monitored, but they also need to be predicted, whether for design or simulation. A 2D simulation model (PriceXD) solving the shallow water wave equations is presented specifically for determining flood risk, assessing flood defense schemes and generating flood forecasts and warnings. The simulation model is required to have a number of important properties: -Solve the full shallow water wave equations using a range of possible solutions; -Automatically adjust the time step and

  18. 3D radiative transfer in colliding wind binaries: Application of the SimpleX algorithm to 3D SPH simulations

    NASA Astrophysics Data System (ADS)

    Madura, Thomas; Clementel, Nicola; Kruip, Chael; Icke, Vincent; Gull, Theodore

    2014-09-01

    We present the first results of full 3D radiative transfer simulations of the colliding stellar winds in a massive binary system. We accomplish this by applying the SIMPLEX algorithm for 3D radiative transfer on an unstructured Delaunay grid to recent 3D smoothed particle hydrodynamics (SPH) simulations of the colliding winds in the binary system η Carinae. We use SIMPLEX to obtain detailed ionization fractions of hydrogen and helium, in 3D, at the resolution of the original SPH simulations. We show how the SIMPLEX simulations can be used to generate synthetic spectral data cubes for comparison to data obtained with the Hubble Space Telescope (HST)/Space Telescope Imaging Spectrograph as part of a multi-cycle program to map changes in η Car's extended interacting wind structures across one binary cycle. Comparison of the HST observations to the SIMPLEX models can help lead to more accurate constraints on the orbital, stellar, and wind parameters of the η Car system, such as the primary's mass-loss rate and the companion's temperature and luminosity. While we initially focus specifically on the η Car binary, the numerical methods employed can be applied to numerous other colliding wind (WR140, WR137, WR19) and dusty 'pinwheel' (WR104, WR98a) binary systems. One of the biggest remaining mysteries is how dust can form and survive in such systems that contain a hot, luminous O star. Coupled with 3D hydrodynamical simulations, SIMPLEX simulations have the potential to help determine the regions where dust can form and survive in these unique objects.

  19. The role of the artificial conductivity in SPH simulations of galaxy clusters: effects on the ICM properties

    NASA Astrophysics Data System (ADS)

    Biffi, V.; Valdarnini, R.

    2015-01-01

    We study the thermal structure of the intracluster medium (ICM) in a set of cosmological hydrodynamical cluster simulations performed with a smoothed particle hydrodynamics (SPH) numerical scheme employing an artificial conductivity (AC) term. We explore the effects of this term on the ICM temperature and entropy profiles, thermal distribution, velocity field and expected X-ray emission. We find that in adiabatic runs, the artificial conductivity favours (i) the formation of an entropy core, raising and flattening the central entropy profiles, in better agreement with findings from Eulerian codes; and (ii) a systematic reduction of the cold gas component. In fact, the cluster large-scale structure and dynamical state are preserved across different runs, but the improved gas mixing enabled by the AC term strongly increases the stripping rate of gas from the cold clumps moving through the ICM. This in turn reduces the production of turbulence generated by the instabilities which develop because of the interaction between clumps and ambient ICM. We then find that turbulent motions, enhanced by the time-dependent artificial viscosity scheme we use, are rather damped by the AC term. The ICM synthetic X-ray emission substantially mirrors the changes in its thermodynamical structure, stressing the robustness of the AC impact. All these effects are softened by the introduction of radiative cooling but still present, especially a partial suppression of cold gas. Therefore, not only the physics accounted for, but also the numerical approach itself can have an impact in shaping the ICM thermodynamical structure and ultimately in the use of SPH cluster simulations for cosmological studies.

  20. Investigation of the initial state of the Moon-forming disk: Bridging SPH simulations and hydrostatic models

    NASA Astrophysics Data System (ADS)

    Nakajima, Miki; Stevenson, David J.

    2014-05-01

    According to the standard giant impact hypothesis, the Moon formed from a partially vaporized disk generated by a collision between the proto-Earth and a Mars-sized impactor. The initial structure of the disk significantly affects the Moon-forming process, including the Moon’s mass, its accretion time scale, and its isotopic similarity to Earth. The dynamics of the impact event determines the initial structure of a nearly hydrostatic Moon-forming disk. However, the hydrostatic and hydrodynamic models have been studied separately and their connection has not previously been well quantified. Here, we show the extent to which the properties of the disk can be inferred from Smoothed Particle Hydrodynamic (SPH) simulations. By using entropy, angular momentum and mass distributions of the SPH outputs as approximately conserved quantities, we compute the two-dimensional disk structure. We investigate four different models: (a) standard, the canonical giant impact model, (b) fast-spinning Earth, a collision between a fast-spinning Earth and a small impactor, (c) sub-Earths, a collision between two objects with half Earth’s mass, and (d) intermediate, a collision of two bodies whose mass ratio is 7:3. Our SPH calculations show that the initial disk has approximately uniform entropy. This is because the materials of different angular momenta are shocked to similar extents. The disks of the fast-spinning Earth and sub-Earths cases are hotter and more vaporized (∼80-90% vapor) than the standard case (∼20%). The intermediate case falls between these values. In the highly vaporized cases, our procedure fails to establish a unique surface density profile of the disk because the disk is unstable according to the Rayleigh criterion (the need for a monotonically increasing specific angular momentum with radius). In these cases, we estimate non-unique disk models by conserving global quantities (mass and total angular momentum). We also develop a semi-analytic model for the

  1. Reactor2D: A tool for simulation of shock deformation

    NASA Astrophysics Data System (ADS)

    Kraus, Eugeny I.; Shabalin, Ivan I.

    2016-10-01

    The basic steps for creating a numerical tool to simulate the deformation and failure processes of complex technical objects (CTO) are presented. Calculations of shock loading of CTO both at low and high speeds, showing the efficiency of the numerical tools created are carried out.

  2. COYOTE: A computer program for 2-D reactive flow simulations

    SciTech Connect

    Cloutman, L.D.

    1990-04-01

    We describe the numerical algorithm used in the COYOTE two- dimensional, transient, Eulerian hydrodynamics program for reactive flows. The program has a variety of options that provide capabilities for a wide range of applications, and it is designed to be robust and relatively easy to use while maintaining adequate accuracy and efficiency to solve realistic problems. It is based on the ICE method, and it includes a general species and chemical reaction network for simulating reactive flows. It also includes swirl, turbulence transport models, and a nonuniform mesh capability. We describe several applications of the program. 33 refs., 4 figs.

  3. Simulation of subgrid orographic precipitation with an embedded 2-D cloud-resolving model

    NASA Astrophysics Data System (ADS)

    Jung, Joon-Hee; Arakawa, Akio

    2016-03-01

    By explicitly resolving cloud-scale processes with embedded two-dimensional (2-D) cloud-resolving models (CRMs), superparameterized global atmospheric models have successfully simulated various atmospheric events over a wide range of time scales. Up to now, however, such models have not included the effects of topography on the CRM grid scale. We have used both 3-D and 2-D CRMs to simulate the effects of topography with prescribed "large-scale" winds. The 3-D CRM is used as a benchmark. The results show that the mean precipitation can be simulated reasonably well by using a 2-D representation of topography as long as the statistics of the topography such as the mean and standard deviation are closely represented. It is also shown that the use of a set of two perpendicular 2-D grids can significantly reduce the error due to a 2-D representation of topography.

  4. Simulations of Quantum Spin Models on 2D Frustrated Lattices

    NASA Astrophysics Data System (ADS)

    Melko, Roger

    2006-03-01

    Algorithmic advances in quantum Monte Carlo techniques have opened up the possibility of studying models in the general class of the S=1/2 XXZ model (equivalent to hard-core bosons) on frustrated lattices. With an antiferromagnetic diagonal interaction (Jz), these models can be solved exactly with QMC, albeit with some effort required to retain ergodicity in the near-degenerate manifold of states that exists for large Jz. The application of the quantum (ferromagnetic off-diagonal) interaction to this classically degenerate manifold produces a variety of intriguing physics, including an order-by-disorder supersolid phase, novel insulating states, and possible exotic quantum critical phenomena. We discuss numerical results for the triangular and kagome lattices with nearest and next-nearest neighbor exchange interactions, and focus on the relevance of the simulations to related areas of physics, such as experiments of cold trapped atomic gasses and the recent theory of deconfined quantum criticality.

  5. Constraints on decreases in Eta Carinae's mass loss from 3D SPH simulations of its binary colliding winds

    NASA Astrophysics Data System (ADS)

    Madura, Thomas; Gull, T. R.; Okazaki, A. T.; Russell, C. M.; Owocki, S. P.; Groh, J. H.; Corcoran, M. F.; Hamaguchi, K.; Teodoro, M.

    2014-01-01

    Recent work suggests that the mass-loss rate of the LBV primary star in the massive, highly eccentric ( 0.9) colliding wind binary Eta Carinae dropped by a factor of 2-3 between 1999 and 2010. We present results from large- (±1545 au) and small- (±155 au) domain, 3D smoothed particle hydrodynamics (SPH) simulations of Eta Car’s colliding winds for three primary mass-loss rates (2.4, 4.8, and 8.5 × 10^-4 Msun/yr), investigating the effects on the dynamics of the binary wind-wind collision (WWC). These simulations include orbital motion, optically thin radiative cooling, and radiative forces. We find that the primary' mass-loss rate greatly affects the time-dependent hydrodynamics at all spatial scales investigated. The simulations also show that the post-shock wind of the companion star switches from the adiabatic to the radiative-cooling regime during periastron passage. This switchover is caused by the encroachment of the wind of the primary into the acceleration zone of the companion's wind, plus radiative inhibition of the companion’s wind by the super-luminous primary. The SPH simulations together with 1D radiative transfer models of the stellar spectra reveal that a factor of two or more drop in primary mass-loss rate should lead to substantial changes in numerous multiwavelength observables. Recent observations are not fully consistent with the model predictions, indicating that any drop in mass-loss rate was likely by a factor < 2 and occurred after 2004. We speculate that most of the recent observed changes in Eta Car are due to a small increase in the WWC opening angle that produces significant effects because our line-of-sight to the system lies close to the dense walls of the WWC zone. A modest decrease in primary mass-loss rate may be responsible, but changes in the wind/stellar parameters of the companion cannot yet be fully ruled out. We suggest observations during Eta Car’s next periastron in 2014 to further test for decreases in mass

  6. Probing the High Redshift IGM: SPH+P{(3}) MG Simulations of the Lyman-alpha Forest

    NASA Astrophysics Data System (ADS)

    Wadsley, J.; Bond, J. R.

    1996-12-01

    Our understanding of the Lyman-alpha forest has received a great boost with the advent of the Keck Telescope and large 3D hydrodynamical simulations. We simulate the high redshift universe using the SPH technique with a P{(3}) MG (Particle-Particle Particle-MultiGrid) non-periodic gravity solver. We employ a high resolution (1 kpc) inner volume, essential for capturing the complex gas physics, larger medium and low resolution volumes surrounding it, essential for correct larger scale tidal fields, and a self-consistently applied, uniform tidal field to model the influence of ultra long waves. Such care is needed because the power per decade in the density fluctuations falls off very slowly in the dwarf galaxy regime of relevance to Lyman alpha clouds. The oft-used periodic boundary condition approach to simulations is ill-suited to proper treatment of the tides. We use constrained field realizations to probe a selection of environments, including voids, quiescent regions, proto-dwarf galaxies and regions experiencing strong tides, such as large galaxy halos and galaxy-galaxy filamentary bridges. We statistically combine our simulations to provide a more comprehensive sample of the universe, including ``rare event'' regions which are difficult to obtain in unrestricted FFT-based approaches. We fit Voigt profiles to the Lyman alpha spectra computed from our simulations direct comparison with the data, e.g., the column density distribution, line widths, temperatures, multiple line-of-sight correlations and the HI (and HeII) flux decrements. We demonstrate the importance of (1) the photoionizing UV flux level and history, (2) tidal environment and (3) differing cosmologies, including CDM and CDM+Lambda. With galaxy-scale rms fluctuations ~ 1 at z=3 and a UV choice motivated by proximity effect observations, the simulations give results in excellent agreement with the data.

  7. A CSF-SPH method for simulating drainage and imbibition at pore-scale resolution while tracking interfacial areas

    NASA Astrophysics Data System (ADS)

    Sivanesapillai, Rakulan; Falkner, Nadine; Hartmaier, Alexander; Steeb, Holger

    2016-09-01

    We present a conservative smoothed particle hydrodynamics (SPH) model to study the flow of multiple, immiscible fluid phases in porous media using direct pore-scale simulations. Particular focus is put on continuously tracking the evolution of interfacial areas, which are considered to be important morphological quantities affecting multiphase transport in porous media. In addition to solving the Navier-Stokes equations, the model accounts for the effects of capillarity at interfaces and contact lines. This is done by means of incorporating the governing interfacial mass and momentum balances using the continuum surface force (CSF) method, thus rendering model calibration routines unnecessary and minimizing the set of constitutive and kinematic assumptions. We address the application of boundary conditions at rigid solid surfaces and study the predictive capability of the model as well as optimal choices for numerical parameters using an extensive model validation procedure. We demonstrate the applicability of the model to simulate multiphase flows involving partial wettability, dynamic effects, large density ratios (up to 1000), large viscosity ratios (up to 100), as well as fragmentation and coalescence of fluid phases. The model is used to study the evolution of fluid-fluid interfacial areas during saturation-controlled primary drainage and main imbibition of heterogeneous pore spaces at low capillary numbers. A variety of pore-scale effects, such as wetting phase entrapment and fragmentation due to snap-off, are observed. Specific fluid-fluid interfacial area is observed to monotonically increase during primary drainage and hysteretic effects are apparent during main imbibition.

  8. Comparison of ALE and SPH Simulations of Vertical Drop Tests of a Composite Fuselage Section into Water

    NASA Technical Reports Server (NTRS)

    Jackson, Karen E.; Fuchs, Yvonne T.

    2008-01-01

    Simulation of multi-terrain impact has been identified as an important research area for improved prediction of rotorcraft crashworthiness within the NASA Subsonic Rotary Wing Aeronautics Program on Rotorcraft Crashworthiness. As part of this effort, two vertical drop tests were conducted of a 5-ft-diameter composite fuselage section into water. For the first test, the fuselage section was impacted in a baseline configuration without energy absorbers. For the second test, the fuselage section was retrofitted with a composite honeycomb energy absorber. Both tests were conducted at a nominal velocity of 25-ft/s. A detailed finite element model was developed to represent each test article and water impact was simulated using both Arbitrary Lagrangian Eulerian (ALE) and Smooth Particle Hydrodynamics (SPH) approaches in LS-DYNA, a nonlinear, explicit transient dynamic finite element code. Analytical predictions were correlated with experimental data for both test configurations. In addition, studies were performed to evaluate the influence of mesh density on test-analysis correlation.

  9. MATCHING THE DARK MATTER PROFILES OF dSph GALAXIES WITH THOSE OF SIMULATED SATELLITES: A TWO-PARAMETER COMPARISON

    SciTech Connect

    Breddels, Maarten A.; Helmi, Amina; Vera-Ciro, Carlos

    2015-12-01

    We compare the dark matter halos’ structural parameters derived for four Milky Way dwarf spheroidal galaxies to those of subhalos found in cosmological N-body simulations. We confirm that estimates of the mass at a single fixed radius are fully consistent with the observations. However, when a second structural parameter such as the logarithmic slope of the dark halo density profile measured close to the half-light radius is included in the comparison, we find little to no overlap between the satellites and the subhalos. Typically the right mass subhalos have steeper profiles at these radii than measurements of the dSph suggest. Using energy arguments we explore if it is possible to solve this discrepancy by invoking baryonic effects. Assuming that feedback from supernovae (SNe) can lead to a reshaping of the halos, we compute the required efficiency and find entirely plausible values for a significant fraction of the subhalos and even as low as 0.1%. This implies that care must be taken not to exaggerate the effect of SNe feedback as this could make the halos too shallow. These results could be used to calibrate and possibly constrain feedback recipes in hydrodynamical simulations.

  10. Resolved granular debris-flow simulations with a coupled SPH-DCDEM model

    NASA Astrophysics Data System (ADS)

    Birjukovs Canelas, Ricardo; Domínguez, José M.; Crespo, Alejandro J. C.; Gómez-Gesteira, Moncho; Ferreira, Rui M. L.

    2016-04-01

    Debris flows represent some of the most relevant phenomena in geomorphological events. Due to the potential destructiveness of such flows, they are the target of a vast amount of research (Takahashi, 2007 and references therein). A complete description of the internal processes of a debris-flow is however still an elusive achievement, explained by the difficulty of accurately measuring important quantities in these flows and developing a comprehensive, generalized theoretical framework capable of describing them. This work addresses the need for a numerical model applicable to granular-fluid mixtures featuring high spatial and temporal resolution, thus capable of resolving the motion of individual particles, including all interparticle contacts. This corresponds to a brute-force approach: by applying simple interaction laws at local scales the macro-scale properties of the flow should be recovered by upscaling. This methodology effectively bypasses the complexity of modelling the intermediate scales by resolving them directly. The only caveat is the need of high performance computing, a demanding but engaging research challenge. The DualSPHysics meshless numerical implementation, based on Smoothed Particle Hydrodynamics (SPH), is expanded with a Distributed Contact Discrete Element Method (DCDEM) in order to explicitly solve the fluid and the solid phase. The model numerically solves the Navier-Stokes and continuity equations for the liquid phase and Newton's motion equations for solid bodies. The interactions between solids are modelled with classical DEM approaches (Kruggel-Emden et al, 2007). Among other validation tests, an experimental set-up for stony debris flows in a slit check dam is reproduced numerically, where solid material is introduced trough a hopper assuring a constant solid discharge for the considered time interval. With each sediment particle undergoing tens of possible contacts, several thousand time-evolving contacts are efficiently treated

  11. 2-D simulation of a waveguide free electron laser having a helical undulator

    SciTech Connect

    Kim, S.K.; Lee, B.C.; Jeong, Y.U.

    1995-12-31

    We have developed a 2-D simulation code for the calculation of output power from an FEL oscillator having a helical undulator and a cylindrical waveguide. In the simulation, the current and the energy of the electron beam is 2 A and 400 keV, respectively. The parameters of the permanent-magnet helical undulator are : period = 32 mm, number of periods = 20, magnetic field = 1.3 kG. The gain per pass is 10 and the output power is calculated to be higher than 10 kW The results of the 2-D simulation are compared with those of 1-D simulation.

  12. Simulations of flow mode distributions on rough fracture surfaces using a parallelized Smoothed Particle Hydrodynamics (SPH) model

    NASA Astrophysics Data System (ADS)

    Kordilla, J.; Shigorina, E.; Tartakovsky, A. M.; Pan, W.; Geyer, T.

    2015-12-01

    Under idealized conditions (smooth surfaces, linear relationship between Bond number and Capillary number of droplets) steady-state flow modes on fracture surfaces have been shown to develop from sliding droplets to rivulets and finally (wavy) film flow, depending on the specified flux. In a recent study we demonstrated the effect of surface roughness on droplet flow in unsaturated wide aperture fractures, however, its effect on other prevailing flow modes is still an open question. The objective of this work is to investigate the formation of complex flow modes on fracture surfaces employing an efficient three-dimensional parallelized SPH model. The model is able to simulate highly intermittent, gravity-driven free-surface flows under dynamic wetting conditions. The effect of surface tension is included via efficient pairwise interaction forces. We validate the model using various analytical and semi-analytical relationships for droplet and complex flow dynamics. To investigate the effect of surface roughness on flow dynamics we construct surfaces with a self-affine fractal geometry and roughness characterized by the Hurst exponent. We demonstrate the effect of surface roughness (on macroscopic scales this can be understood as a tortuosity) on the steady-state distribution of flow modes. Furthermore we show the influence of a wide range of natural wetting conditions (defined by static contact angles) on the final distribution of surface coverage, which is of high importance for matrix-fracture interaction processes.

  13. The effect of bed defects on bedform generation - A new approach using the SPH simulation technique

    NASA Astrophysics Data System (ADS)

    Bartzke, Gerhard; Podszun, Lina; Huhn, Katrin

    2014-05-01

    Various researchers investigated the initiation of bed forms from a flat sediment bed in aquatic environments using analogue techniques, such as wave tanks or in situ field investigations. Nevertheless, this process particularly the role of major controlling factors is still not fully understood. Prior work has highlighted that the existence of bed defects has the potential to influence the erosion pattern at the surface of sediment beds. In such cases, artificial defects were manufactured in a flat bed and tested under various flow speeds, which resulted in the generation of various bed forms. As bed defects impinge on the in the interior of sediment beds, their effects on fluid flow conditions are difficult to quantify with analogue techniques. To investigate the fluid flow conditions occurring at the direct vicinity and in the interior of a sediment bed, a new 3D-SPH (Smooth Particle Hydrodynamics) numerical 'wave tank', as an alternative to the difficult task of in situ measurement, was used. The model geometry was chosen to mimic typical wave tank dimensions, i.e., X = 2.5 m, Y = 0.35 m, Z = 0.8 m. In order to generate a sediment bed 0.2 m in height, each grain (D50 = 4000 µm) was generated as a fixed particle. Afterwards, the numerical wave tank was flooded with fluid particles. A wave was generated using a vertical paddle accelerated to 0.8 m/s perpendicular to the bed. Six sets of experiments were undertaken with an increasing depth range of bed defects (0.04 - 0.2 m). High resolution flow conditions inside the bed defects as a function of the wave activity were constantly monitored. For estimation of sediment erosion, all measured flow speeds were compared to the Yalin (1972) curve describing transport initiation. The results showed that the fluid velocities in the bed defect increased with increasing bed defect size depth, which was accompanied by an increase of the flow velocities into the pore spaces along the flanks of the defect. With increasing wave

  14. 2D numerical simulation of the MEP energy-transport model with a finite difference scheme

    SciTech Connect

    Romano, V. . E-mail: romano@dmi.unict.it

    2007-02-10

    A finite difference scheme of Scharfetter-Gummel type is used to simulate a consistent energy-transport model for electron transport in semiconductors devices, free of any fitting parameters, formulated on the basis of the maximum entropy principle. Simulations of silicon n{sup +}-n-n{sup +} diodes, 2D-MESFET and 2D-MOSFET and comparisons with the results obtained by a direct simulation of the Boltzmann transport equation and with other energy-transport models, known in the literature, show the validity of the model and the robustness of the numerical scheme.

  15. Size-frequency distributions of fragments from SPH/ N-body simulations of asteroid impacts: Comparison with observed asteroid families

    NASA Astrophysics Data System (ADS)

    Durda, Daniel D.; Bottke, William F.; Nesvorný, David; Enke, Brian L.; Merline, William J.; Asphaug, Erik; Richardson, Derek C.

    2007-02-01

    We investigate the morphology of size-frequency distributions (SFDs) resulting from impacts into 100-km-diameter parent asteroids, represented by a suite of 161 SPH/N-body simulations conducted to study asteroid satellite formation [Durda, D.D., Bottke, W.F., Enke, B.L., Merline, W.J., Asphaug, E., Richardson, D.C., Leinhardt, Z.M., 2004. Icarus 170, 243-257]. The spherical basalt projectiles range in diameter from 10 to 46 km (in equally spaced mass increments in logarithmic space, covering six discrete sizes), impact speeds range from 2.5 to 7 km/s (generally in 1 km/s increments), and impact angles range from 15° to 75° (nearly head-on to very oblique) in 15° increments. These modeled SFD morphologies match very well the observed SFDs of many known asteroid families. We use these modeled SFDs to scale to targets both larger and smaller than 100 km in order to gain insights into the circumstances of the impacts that formed these families. Some discrepancies occur for families with parent bodies smaller than a few tens of kilometers in diameter (e.g., 832 Karin), however, so due caution should be used in applying our results to such small families. We find that ˜20 observed main-belt asteroid families are produced by the catastrophic disruption of D >100 km parent bodies. Using these data as constraints, collisional modeling work [Bottke Jr., W.F., Durda, D.D., Nesvorný, D., Jedicke, R., Morbidelli, A., Vokrouhlický, D., Levison, H.F., 2005b. Icarus 179, 63-94] suggests that the threshold specific energy, QD∗, needed to eject 50% of the target body's mass is very close to that predicted by Benz and Asphaug [Benz, W., Asphaug, E., 1999. Icarus 142, 5-20].

  16. Linking 3D and 2D binding kinetics of membrane proteins by multiscale simulations

    PubMed Central

    Xie, Zhong-Ru; Chen, Jiawen; Wu, Yinghao

    2014-01-01

    Membrane proteins are among the most functionally important proteins in cells. Unlike soluble proteins, they only possess two translational degrees of freedom on cell surfaces, and experience significant constraints on their rotations. As a result, it is currently challenging to characterize the in situ binding of membrane proteins. Using the membrane receptors CD2 and CD58 as a testing system, we developed a multiscale simulation framework to study the differences of protein binding kinetics between 3D and 2D environments. The association and dissociation processes were implemented by a coarse-grained Monte-Carlo algorithm, while the dynamic properties of proteins diffusing on lipid bilayer were captured from all-atom molecular dynamic simulations. Our simulations show that molecular diffusion, linker flexibility and membrane fluctuations are important factors in adjusting binding kinetics. Moreover, by calibrating simulation parameters to the measurements of 3D binding, we derived the 2D binding constant which is quantitatively consistent with the experimental data, indicating that the method is able to capture the difference between 3D and 2D binding environments. Finally, we found that the 2D dissociation between CD2 and CD58 is about 100-fold slower than the 3D dissociation. In summary, our simulation framework offered a generic approach to study binding mechanisms of membrane proteins. PMID:25271078

  17. The simulation of 3D microcalcification clusters in 2D digital mammography and breast tomosynthesis

    SciTech Connect

    Shaheen, Eman; Van Ongeval, Chantal; Zanca, Federica; Cockmartin, Lesley; Marshall, Nicholas; Jacobs, Jurgen; Young, Kenneth C.; Dance, David R.; Bosmans, Hilde

    2011-12-15

    Purpose: This work proposes a new method of building 3D models of microcalcification clusters and describes the validation of their realistic appearance when simulated into 2D digital mammograms and into breast tomosynthesis images. Methods: A micro-CT unit was used to scan 23 breast biopsy specimens of microcalcification clusters with malignant and benign characteristics and their 3D reconstructed datasets were segmented to obtain 3D models of microcalcification clusters. These models were then adjusted for the x-ray spectrum used and for the system resolution and simulated into 2D projection images to obtain mammograms after image processing and into tomographic sequences of projection images, which were then reconstructed to form 3D tomosynthesis datasets. Six radiologists were asked to distinguish between 40 real and 40 simulated clusters of microcalcifications in two separate studies on 2D mammography and tomosynthesis datasets. Receiver operating characteristic (ROC) analysis was used to test the ability of each observer to distinguish between simulated and real microcalcification clusters. The kappa statistic was applied to assess how often the individual simulated and real microcalcification clusters had received similar scores (''agreement'') on their realistic appearance in both modalities. This analysis was performed for all readers and for the real and the simulated group of microcalcification clusters separately. ''Poor'' agreement would reflect radiologists' confusion between simulated and real clusters, i.e., lesions not systematically evaluated in both modalities as either simulated or real, and would therefore be interpreted as a success of the present models. Results: The area under the ROC curve, averaged over the observers, was 0.55 (95% confidence interval [0.44, 0.66]) for the 2D study, and 0.46 (95% confidence interval [0.29, 0.64]) for the tomosynthesis study, indicating no statistically significant difference between real and simulated

  18. A simple way to improve AGN feedback prescription in SPH simulations

    NASA Astrophysics Data System (ADS)

    Zubovas, Kastytis; Bourne, Martin A.; Nayakshin, Sergei

    2016-03-01

    Active galactic nuclei (AGN) feedback is an important ingredient in galaxy evolution, however its treatment in numerical simulations is necessarily approximate, requiring subgrid prescriptions due to the dynamical range involved in the calculations. We present a suite of smoothed particle hydrodynamics simulations designed to showcase the importance of the choice of a particular subgrid prescription for AGN feedback. We concentrate on two approaches to treating wide-angle AGN outflows: thermal feedback, where thermal and kinetic energy is injected into the gas surrounding the supermassive black hole (SMBH) particle, and virtual particle feedback, where energy is carried by tracer particles radially away from the AGN. We show that the latter model produces a far more complex structure around the SMBH, which we argue is a more physically correct outcome. We suggest a simple improvement to the thermal feedback model - injecting the energy into a cone, rather than spherically symmetrically - and show that this markedly improves the agreement between the two prescriptions, without requiring any noticeable increase in the computational cost of the simulation.

  19. An efficient simulation method of a cyclotron sector-focusing magnet using 2D Poisson code

    NASA Astrophysics Data System (ADS)

    Gad Elmowla, Khaled Mohamed M.; Chai, Jong Seo; Yeon, Yeong H.; Kim, Sangbum; Ghergherehchi, Mitra

    2016-10-01

    In this paper we discuss design simulations of a spiral magnet using 2D Poisson code. The Independent Layers Method (ILM) is a new technique that was developed to enable the use of two-dimensional simulation code to calculate a non-symmetric 3-dimensional magnetic field. In ILM, the magnet pole is divided into successive independent layers, and the hill and valley shape around the azimuthal direction is implemented using a reference magnet. The normalization of the magnetic field in the reference magnet produces a profile that can be multiplied by the maximum magnetic field in the hill magnet, which is a dipole magnet made of the hills at the same radius. Both magnets are then calculated using the 2D Poisson SUPERFISH code. Then a fully three-dimensional magnetic field is produced using TOSCA for the original spiral magnet, and the comparison of the 2D and 3D results shows a good agreement between both.

  20. Low frequency 2D Raman-THz spectroscopy of ionic solution: A simulation study

    NASA Astrophysics Data System (ADS)

    Pan, Zhijun; Wu, Tianmin; Jin, Tan; Liu, Yong; Nagata, Yuki; Zhang, Ruiting; Zhuang, Wei

    2015-06-01

    The 2D Raman-THz spectrum of the MgCl2 solution was simulated using the molecular dynamics simulation and the stability matrix method and compared with that of the pure water. The 2D Raman-THz signal provides more information on the ion effects on the collective water motion than the conventional 1D signal. The presence of MgCl2 suppresses the cross peak of water between the hydrogen bond bending and the other intermolecular vibrational mode, which clearly illustrates that the water hydrogen bending motion is affected by the confining effect of the ions. Our theoretical work thus demonstrates that the 2D Raman-THz technique can become a valuable nonlinear vibrational probe for the molecular dynamics in the ionic solutions.

  1. High-resolution simulations of clump-clump collisions using SPH with particle splitting

    NASA Astrophysics Data System (ADS)

    Kitsionas, S.; Whitworth, A. P.

    2007-06-01

    We investigate, by means of numerical simulations, the phenomenology of star formation triggered by low-velocity collisions between low-mass molecular clumps. The simulations are performed using a smoothed particle hydrodynamics code which satisfies the Jeans condition by invoking on-the-fly particle splitting. Clumps are modelled as stable truncated (non-singular) isothermal, i.e. Bonnor-Ebert, spheres. Collisions are characterized by M0 (clump mass), b (offset parameter, i.e. ratio of impact parameter to clump radius) and (Mach number, i.e. ratio of collision velocity to effective post-shock sound speed). The gas subscribes to a barotropic equation of state, which is intended to capture (i) the scaling of pre-collision internal velocity dispersion with clump mass, (ii) post-shock radiative cooling and (iii) adiabatic heating in optically thick protostellar fragments. The efficiency of star formation is found to vary between 10 and 30 per cent in the different collisions studied and it appears to increase with decreasing M0, and/or decreasing b, and/or increasing . For b < 0.5 collisions produce shock-compressed layers which fragment into filaments. Protostellar objects then condense out of the filaments and accrete from them. The resulting accretion rates are high, , for the first . The densities in the filaments, , are sufficient that they could be mapped in NH3 or CS line radiation, in nearby star formation regions.

  2. Numerical simulation of ( T 2, T 1) 2D NMR and fluid responses

    NASA Astrophysics Data System (ADS)

    Tan, Mao-Jin; Zou, You-Long; Zhang, Jin-Yan; Zhao, Xin

    2012-12-01

    One-dimensional nuclear magnetic resonance (1D NMR) logging technology is limited for fluid typing, while two-dimensional nuclear magnetic resonance (2D NMR) logging can provide more parameters including longitudinal relaxation time ( T 1) and transverse relaxation time ( T 2) relative to fluid types in porous media. Based on the 2D NMR relaxation mechanism in a gradient magnetic field, echo train simulation and 2D NMR inversion are discussed in detail. For 2D NMR inversion, a hybrid inversion method is proposed based on the damping least squares method (LSQR) and an improved truncated singular value decomposition (TSVD) algorithm. A series of spin echoes are first simulated with multiple waiting times ( T W s) in a gradient magnetic field for given fluid models and these synthesized echo trains are inverted by the hybrid method. The inversion results are consistent with given models. Moreover, the numerical simulation of various fluid models such as the gas-water, light oil-water, and vicious oil-water models were carried out with different echo spacings ( T E s) and T W s by this hybrid method. Finally, the influences of different signal-to-noise ratios (SNRs) on inversion results in various fluid models are studied. The numerical simulations show that the hybrid method and optimized observation parameters are applicable to fluid typing of gas-water and oil-water models.

  3. Simulation of 2D Brain's Potential Distribution Based on Two Electrodes ECVT Using Finite Element Method

    NASA Astrophysics Data System (ADS)

    Sirait, S. H.; Edison, R. E.; Baidillah, M. R.; Taruno, W. P.; Haryanto, F.

    2016-08-01

    The aim of this study is to simulate the potential distribution of 2D brain geometry based on two electrodes ECVT. ECVT (electrical capacitance tomography) is a tomography modality which produces dielectric distribution image of a subject from several capacitance electrodes measurements. This study begins by producing the geometry of 2D brain based on MRI image and then setting the boundary conditions on the boundaries of the geometry. The values of boundary conditions follow the potential values used in two electrodes brain ECVT, and for this reason the first boundary is set to 20 volt and 2.5 MHz signal and another boundary is set to ground. Poisson equation is implemented as the governing equation in the 2D brain geometry and finite element method is used to solve the equation. Simulated Hodgkin-Huxley action potential is applied as disturbance potential in the geometry. We divide this study into two which comprises simulation without disturbance potential and simulation with disturbance potential. From this study, each of time dependent potential distributions from non-disturbance and disturbance potential of the 2D brain geometry has been generated.

  4. 2-D MHD numerical simulations of EML plasma armatures with ablation

    NASA Astrophysics Data System (ADS)

    Boynton, G. C.; Huerta, M. A.; Thio, Y. C.

    1993-01-01

    We use a 2-D) resistive MHD code to simulate an EML plasma armature. The energy equation includes Ohmic heating, radiation heat transport and the ideal gas equation of state, allowing for variable ionization using the Saha equations. We calculate rail ablation taking into account the flow of heat into the interior of the rails. Our simulations show the development of internal convective flows and secondary arcs. We use an explicit Flux Corrected Transport algorithm to advance all quantities in time.

  5. SPH/N-body simulations of small (D = 10 km) monolithic asteroidal breakups and improved parametric relations for Monte-Carlo collisional models

    NASA Astrophysics Data System (ADS)

    Ševecek, Pavel; Broz, Miroslav; Nesvorny, David; Durda, Daniel D.; Asphaug, Erik; Walsh, Kevin J.; Richardson, Derek C.

    2016-10-01

    Detailed models of asteroid collisions can yield important constrains for the evolution of the Main Asteroid Belt, but the respective parameter space is large and often unexplored. We thus performed a new set of simulations of asteroidal breakups, i.e. fragmentations of intact targets, subsequent gravitational reaccumulation and formation of small asteroid families, focusing on parent bodies with diameters D = 10 km.Simulations were performed with a smoothed-particle hydrodynamics (SPH) code (Benz & Asphaug 1994), combined with an efficient N-body integrator (Richardson et al. 2000). We assumed a number of projectile sizes, impact velocities and impact angles. The rheology used in the physical model does not include friction nor crushing; this allows for a direct comparison to results of Durda et al. (2007). Resulting size-frequency distributions are significantly different from scaled-down simulations with D = 100 km monolithic targets, although they may be even more different for pre-shattered targets.We derive new parametric relations describing fragment distributions, suitable for Monte-Carlo collisional models. We also characterize velocity fields and angular distributions of fragments, which can be used as initial conditions in N-body simulations of small asteroid families. Finally, we discuss various uncertainties related to SPH simulations.

  6. The simulation of 3D mass models in 2D digital mammography and breast tomosynthesis

    SciTech Connect

    Shaheen, Eman De Keyzer, Frederik; Bosmans, Hilde; Ongeval, Chantal Van; Dance, David R.; Young, Kenneth C.

    2014-08-15

    Purpose: This work proposes a new method of building 3D breast mass models with different morphological shapes and describes the validation of the realism of their appearance after simulation into 2D digital mammograms and breast tomosynthesis images. Methods: Twenty-five contrast enhanced MRI breast lesions were collected and each mass was manually segmented in the three orthogonal views: sagittal, coronal, and transversal. The segmented models were combined, resampled to have isotropic voxel sizes, triangularly meshed, and scaled to different sizes. These masses were referred to as nonspiculated masses and were then used as nuclei onto which spicules were grown with an iterative branching algorithm forming a total of 30 spiculated masses. These 55 mass models were projected into 2D projection images to obtain mammograms after image processing and into tomographic sequences of projection images, which were then reconstructed to form 3D tomosynthesis datasets. The realism of the appearance of these mass models was assessed by five radiologists via receiver operating characteristic (ROC) analysis when compared to 54 real masses. All lesions were also given a breast imaging reporting and data system (BIRADS) score. The data sets of 2D mammography and tomosynthesis were read separately. The Kendall's coefficient of concordance was used for the interrater observer agreement assessment for the BIRADS scores per modality. Further paired analysis, using the Wilcoxon signed rank test, of the BIRADS assessment between 2D and tomosynthesis was separately performed for the real masses and for the simulated masses. Results: The area under the ROC curves, averaged over all observers, was 0.54 (95% confidence interval [0.50, 0.66]) for the 2D study, and 0.67 (95% confidence interval [0.55, 0.79]) for the tomosynthesis study. According to the BIRADS scores, the nonspiculated and the spiculated masses varied in their degrees of malignancy from normal (BIRADS 1) to highly

  7. 2D-3D hybrid stabilized finite element method for tsunami runup simulations

    NASA Astrophysics Data System (ADS)

    Takase, S.; Moriguchi, S.; Terada, K.; Kato, J.; Kyoya, T.; Kashiyama, K.; Kotani, T.

    2016-09-01

    This paper presents a two-dimensional (2D)-three-dimensional (3D) hybrid stabilized finite element method that enables us to predict a propagation process of tsunami generated in a hypocentral region, which ranges from offshore propagation to runup to urban areas, with high accuracy and relatively low computational costs. To be more specific, the 2D shallow water equation is employed to simulate the propagation of offshore waves, while the 3D Navier-Stokes equation is employed for the runup in urban areas. The stabilized finite element method is utilized for numerical simulations for both of the 2D and 3D domains that are independently discretized with unstructured meshes. The multi-point constraint and transmission methods are applied to satisfy the continuity of flow velocities and pressures at the interface between the resulting 2D and 3D meshes, since neither their spatial dimensions nor node arrangements are consistent. Numerical examples are presented to demonstrate the performance of the proposed hybrid method to simulate tsunami behavior, including offshore propagation and runup to urban areas, with substantially lower computation costs in comparison with full 3D computations.

  8. 2D and 3D simulations of damage in 5-grain copper gas gun samples

    SciTech Connect

    Tonks, Davis L; Cerreta, Ellen K; Dennis - Koller, Darcie; Escobedo - Diaz, Juan P; Trujillo, Carl P; Luo, Shengian; Bingert, John F

    2010-12-16

    2D and 3D Hydrocode simulations were done of a gas gun damage experiment involving a 5 grain sample with a polycrystalline flyer with a velocity of about 140 m/s. The simulations were done with the Flag hydrocode and involved explicit meshing of the 5 grains with a single crystal plasticity model and a pressure based damage model. The calculated fields were compared with two cross sections from the recovered sample. The sample exhibited grain boundary cracks at high angle and tilt grain boundaries in the sample but not at a sigma 3 twin boundary. However, the calculation showed large gradients in stress and strain at only the twin boundary, contrary to expectation. This indicates that the twin boundary is quite strong to resist the predicted high gradients and that the calculation needs the addition of a grain boundary fracture mode. The 2D and 3D simulations were compared.

  9. 2D MHD test-particle simulations in modeling geomagnetic storms

    NASA Astrophysics Data System (ADS)

    Li, Z.; Elkington, S. R.; Hudson, M. K.; Murphy, J. J.; Schmitt, P.; Wiltberger, M. J.

    2012-12-01

    The effects of magnetic storms on the evolution of the electron radiation belts are studied using MHD test-particle simulations. The 2D guiding center code developed by Elkington et al. (2002) has been used to simulate particle motion in the Solar Magnetic equatorial plane in the MHD fields calculated from the Lyon-Fedder-Mobarry global MHD code. However, our study shows that the B-minimum plane is well off the SM equatorial plane during solstice events. Since 3D test-particle simulation is computationally expensive, we improve the 2D model by pushing particles in the B-minimum surface instead of the SM equatorial plane. Paraview software is used to visualize the LFM data file and to find the B-minimum surface. Magnetic and electric fields on B-minimum surface are projected to the equatorial plane for particle pushing.

  10. FRANC2D: A two-dimensional crack propagation simulator. Version 2.7: User's guide

    NASA Technical Reports Server (NTRS)

    Wawrzynek, Paul; Ingraffea, Anthony

    1994-01-01

    FRANC 2D (FRacture ANalysis Code, 2 Dimensions) is a menu driven, interactive finite element computer code that performs fracture mechanics analyses of 2-D structures. The code has an automatic mesh generator for triangular and quadrilateral elements. FRANC2D calculates the stress intensity factor using linear elastic fracture mechanics and evaluates crack extension using several methods that may be selected by the user. The code features a mesh refinement and adaptive mesh generation capability that is automatically developed according to the predicted crack extension direction and length. The code also has unique features that permit the analysis of layered structure with load transfer through simulated mechanical fasteners or bonded joints. The code was written for UNIX workstations with X-windows graphics and may be executed on the following computers: DEC DecStation 3000 and 5000 series, IBM RS/6000 series, Hewlitt-Packard 9000/700 series, SUN Sparc stations, and most Silicon Graphics models.

  11. Simulation of Cardiac Arrhythmias Using a 2D Heterogeneous Whole Heart Model.

    PubMed

    Balakrishnan, Minimol; Chakravarthy, V Srinivasa; Guhathakurta, Soma

    2015-01-01

    Simulation studies of cardiac arrhythmias at the whole heart level with electrocardiogram (ECG) gives an understanding of how the underlying cell and tissue level changes manifest as rhythm disturbances in the ECG. We present a 2D whole heart model (WHM2D) which can accommodate variations at the cellular level and can generate the ECG waveform. It is shown that, by varying cellular-level parameters like the gap junction conductance (GJC), excitability, action potential duration (APD) and frequency of oscillations of the auto-rhythmic cell in WHM2D a large variety of cardiac arrhythmias can be generated including sinus tachycardia, sinus bradycardia, sinus arrhythmia, sinus pause, junctional rhythm, Wolf Parkinson White syndrome and all types of AV conduction blocks. WHM2D includes key components of the electrical conduction system of the heart like the SA (Sino atrial) node cells, fast conducting intranodal pathways, slow conducting atriovenctricular (AV) node, bundle of His cells, Purkinje network, atrial, and ventricular myocardial cells. SA nodal cells, AV nodal cells, bundle of His cells, and Purkinje cells are represented by the Fitzhugh-Nagumo (FN) model which is a reduced model of the Hodgkin-Huxley neuron model. The atrial and ventricular myocardial cells are modeled by the Aliev-Panfilov (AP) two-variable model proposed for cardiac excitation. WHM2D can prove to be a valuable clinical tool for understanding cardiac arrhythmias.

  12. Simulation of Cardiac Arrhythmias Using a 2D Heterogeneous Whole Heart Model

    PubMed Central

    Balakrishnan, Minimol; Chakravarthy, V. Srinivasa; Guhathakurta, Soma

    2015-01-01

    Simulation studies of cardiac arrhythmias at the whole heart level with electrocardiogram (ECG) gives an understanding of how the underlying cell and tissue level changes manifest as rhythm disturbances in the ECG. We present a 2D whole heart model (WHM2D) which can accommodate variations at the cellular level and can generate the ECG waveform. It is shown that, by varying cellular-level parameters like the gap junction conductance (GJC), excitability, action potential duration (APD) and frequency of oscillations of the auto-rhythmic cell in WHM2D a large variety of cardiac arrhythmias can be generated including sinus tachycardia, sinus bradycardia, sinus arrhythmia, sinus pause, junctional rhythm, Wolf Parkinson White syndrome and all types of AV conduction blocks. WHM2D includes key components of the electrical conduction system of the heart like the SA (Sino atrial) node cells, fast conducting intranodal pathways, slow conducting atriovenctricular (AV) node, bundle of His cells, Purkinje network, atrial, and ventricular myocardial cells. SA nodal cells, AV nodal cells, bundle of His cells, and Purkinje cells are represented by the Fitzhugh-Nagumo (FN) model which is a reduced model of the Hodgkin-Huxley neuron model. The atrial and ventricular myocardial cells are modeled by the Aliev-Panfilov (AP) two-variable model proposed for cardiac excitation. WHM2D can prove to be a valuable clinical tool for understanding cardiac arrhythmias. PMID:26733873

  13. Nonlinear soil-structure interaction calculations simulating the SIMQUAKE experiment using STEALTH 2D

    NASA Technical Reports Server (NTRS)

    Tang, H. T.; Hofmann, R.; Yee, G.; Vaughan, D. K.

    1980-01-01

    Transient, nonlinear soil-structure interaction simulations of an Electric Power Research Institute, SIMQUAKE experiment were performed using the large strain, time domain STEALTH 2D code and a cyclic, kinematically hardening cap soil model. Results from the STEALTH simulations were compared to identical simulations performed with the TRANAL code and indicate relatively good agreement between all the STEALTH and TRANAL calculations. The differences that are seen can probably be attributed to: (1) large (STEALTH) vs. small (TRANAL) strain formulation and/or (2) grid discretization differences.

  14. Momentum Transport: 2D and 3D Cloud Resolving Model Simulations

    NASA Technical Reports Server (NTRS)

    Tao, Wei-Kuo

    2001-01-01

    The major objective of this study is to investigate the momentum budgets associated with several convective systems that developed during the TOGA COARE IOP (west Pacific warm pool region) and GATE (east Atlantic region). The tool for this study is the improved Goddard Cumulas Ensemble (GCE) model which includes a 3-class ice-phase microphysical scheme, explicit cloud radiative interactive processes and air-sea interactive surface processes. The model domain contains 256 x 256 grid points (with 2 km resolution) in the horizontal and 38 grid points (to a depth of 22 km) in the vertical. The 2D domain has 1024 grid points. The simulations were performed over a 7-day time period (December 19-26, 1992, for TOGA COARE and September 1-7, 1994 for GATE). Cyclic literal boundary conditions are required for this type of long-term integration. Two well organized squall systems (TOGA, COARE February 22, 1993, and GATE September 12, 1994) were also simulated using the 3D GCE model. Only 9 h simulations were required to cover the life time of the squall systems. the lateral boundary conditions were open for these two squall systems simulations. the following will be examined: (1) the momentum budgets in the convective and stratiform regions, (2) the relationship between momentum transport and cloud organization (i.e., well organized squall lines versus less organized convective), (3) the differences and similarities in momentum transport between 2D and 3D simulated convective systems, and (4) the differences and similarities in momentum budgets between cloud systems simulated with open and cyclic lateral boundary conditions. Preliminary results indicate that there are only small differences between 2D and 3D simulated momentum budgets. Major differences occur, however, between momentum budgets associated with squall systems simulated using different lateral boundary conditions.

  15. 3D radiative transfer in η Carinae: application of the SIMPLEX algorithm to 3D SPH simulations of binary colliding winds

    NASA Astrophysics Data System (ADS)

    Clementel, N.; Madura, T. I.; Kruip, C. J. H.; Icke, V.; Gull, T. R.

    2014-09-01

    Eta Carinae is an ideal astrophysical laboratory for studying massive binary interactions and evolution, and stellar wind-wind collisions. Recent three-dimensional (3D) simulations set the stage for understanding the highly complex 3D flows in η Car. Observations of different broad high- and low-ionization forbidden emission lines provide an excellent tool to constrain the orientation of the system, the primary's mass-loss rate, and the ionizing flux of the hot secondary. In this work, we present the first steps towards generating synthetic observations to compare with available and future HST/STIS data. We present initial results from full 3D radiative transfer simulations of the interacting winds in η Car. We use the SIMPLEX algorithm to post-process the output from 3D smoothed particle hydrodynamics (SPH) simulations and obtain the ionization fractions of hydrogen and helium assuming three different mass-loss rates for the primary star. The resultant ionization maps of both species constrain the regions where the observed forbidden emission lines can form. Including collisional ionization is necessary to achieve a better description of the ionization states, especially in the areas shielded from the secondary's radiation. We find that reducing the primary's mass-loss rate increases the volume of ionized gas, creating larger areas where the forbidden emission lines can form. We conclude that post-processing 3D SPH data with SIMPLEX is a viable tool to create ionization maps for η Car.

  16. 3D Radiative Transfer in Eta Carinae: Application of the SimpleX Algorithm to 3D SPH Simulations of Binary Colliding Winds

    NASA Technical Reports Server (NTRS)

    Clementel, N.; Madura, T. I.; Kruip, C. J. H.; Icke, V.; Gull, T. R.

    2014-01-01

    Eta Carinae is an ideal astrophysical laboratory for studying massive binary interactions and evolution, and stellar wind-wind collisions. Recent three-dimensional (3D) simulations set the stage for understanding the highly complex 3D flows in Eta Car. Observations of different broad high- and low-ionization forbidden emission lines provide an excellent tool to constrain the orientation of the system, the primary's mass-loss rate, and the ionizing flux of the hot secondary. In this work we present the first steps towards generating synthetic observations to compare with available and future HST/STIS data. We present initial results from full 3D radiative transfer simulations of the interacting winds in Eta Car. We use the SimpleX algorithm to post-process the output from 3D SPH simulations and obtain the ionization fractions of hydrogen and helium assuming three different mass-loss rates for the primary star. The resultant ionization maps of both species constrain the regions where the observed forbidden emission lines can form. Including collisional ionization is necessary to achieve a better description of the ionization states, especially in the areas shielded from the secondary's radiation. We find that reducing the primary's mass-loss rate increases the volume of ionized gas, creating larger areas where the forbidden emission lines can form. We conclude that post processing 3D SPH data with SimpleX is a viable tool to create ionization maps for Eta Car.

  17. 3D Radiative Transfer in Eta Carinae: Application of the SimpleX Algorithm to 3D SPH Simulations of Binary Colliding Winds

    NASA Technical Reports Server (NTRS)

    Clementel, N.; Madura, T. I.; Kruip, C.J.H.; Icke, V.; Gull, T. R.

    2014-01-01

    Eta Carinae is an ideal astrophysical laboratory for studying massive binary interactions and evolution, and stellar wind-wind collisions. Recent three-dimensional (3D) simulations set the stage for understanding the highly complex 3D flows in eta Car. Observations of different broad high- and low-ionization forbidden emission lines provide an excellent tool to constrain the orientation of the system, the primary's mass-loss rate, and the ionizing flux of the hot secondary. In this work we present the first steps towards generating synthetic observations to compare with available and future HST/STIS data. We present initial results from full 3D radiative transfer simulations of the interacting winds in eta Car.We use the SimpleX algorithm to post-process the output from 3D SPH simulations and obtain the ionization fractions of hydrogen and helium assuming three different mass-loss rates for the primary star. The resultant ionization maps of both species constrain the regions where the observed forbidden emission lines can form. Including collisional ionization is necessary to achieve a better description of the ionization states, especially in the areas shielded from the secondary's radiation. We find that reducing the primary's mass-loss rate increases the volume of ionized gas, creating larger areas where the forbidden emission lines can form.We conclude that post processing 3D SPH data with SimpleX is a viable tool to create ionization maps for eta Car.

  18. Implicit Incompressible SPH.

    PubMed

    Ihmsen, Markus; Cornelis, Jens; Solenthaler, Barbara; Horvath, Christopher; Teschner, Matthias

    2013-07-25

    We propose a novel formulation of the projection method for Smoothed Particle Hydrodynamics (SPH). We combine a symmetric SPH pressure force and an SPH discretization of the continuity equation to obtain a discretized form of the pressure Poisson equation (PPE). In contrast to previous projection schemes, our system does consider the actual computation of the pressure force. This incorporation improves the convergence rate of the solver. Furthermore, we propose to compute the density deviation based on velocities instead of positions as this formulation improves the robustness of the time-integration scheme. We show that our novel formulation outperforms previous projection schemes and state-of-the-art SPH methods. Large time steps and small density deviations of down to 0.01% can be handled in typical scenarios. The practical relevance of the approach is illustrated by scenarios with up to 40 million SPH particles.

  19. Implicit incompressible SPH.

    PubMed

    Ihmsen, Markus; Cornelis, Jens; Solenthaler, Barbara; Horvath, Christopher; Teschner, Matthias

    2014-03-01

    We propose a novel formulation of the projection method for Smoothed Particle Hydrodynamics (SPH). We combine a symmetric SPH pressure force and an SPH discretization of the continuity equation to obtain a discretized form of the pressure Poisson equation (PPE). In contrast to previous projection schemes, our system does consider the actual computation of the pressure force. This incorporation improves the convergence rate of the solver. Furthermore, we propose to compute the density deviation based on velocities instead of positions as this formulation improves the robustness of the time-integration scheme. We show that our novel formulation outperforms previous projection schemes and state-of-the-art SPH methods. Large time steps and small density deviations of down to 0.01 percent can be handled in typical scenarios. The practical relevance of the approach is illustrated by scenarios with up to 40 million SPH particles.

  20. Penetration of tungsten-alloy rods into composite ceramic targets: Experiments and 2-D simulations

    SciTech Connect

    Rosenberg, Z.; Dekel, E.; Hohler, V.; Stilp, A. J.; Weber, K.

    1998-07-10

    A series of terminal ballistics experiments, with scaled tungsten-alloy penetrators, was performed on composite targets consisting of ceramic tiles glued to thick steel backing plates. Tiles of silicon-carbide, aluminum nitride, titanium-dibroide and boron-carbide were 20-80 mm thick, and impact velocity was 1.7 km/s. 2-D numerical simulations, using the PISCES code, were performed in order to simulate these shots. It is shown that a simplified version of the Johnson-Holmquist failure model can account for the penetration depths of the rods but is not enough to capture the effect of lateral release waves on these penetrations.

  1. Development of stress boundary conditions in smoothed particle hydrodynamics (SPH) for the modeling of solids deformation

    NASA Astrophysics Data System (ADS)

    Douillet-Grellier, Thomas; Pramanik, Ranjan; Pan, Kai; Albaiz, Abdulaziz; Jones, Bruce D.; Williams, John R.

    2016-10-01

    This paper develops a method for imposing stress boundary conditions in smoothed particle hydrodynamics (SPH) with and without the need for dummy particles. SPH has been used for simulating phenomena in a number of fields, such as astrophysics and fluid mechanics. More recently, the method has gained traction as a technique for simulation of deformation and fracture in solids, where the meshless property of SPH can be leveraged to represent arbitrary crack paths. Despite this interest, application of boundary conditions within the SPH framework is typically limited to imposed velocity or displacement using fictitious dummy particles to compensate for the lack of particles beyond the boundary interface. While this is enough for a large variety of problems, especially in the case of fluid flow, for problems in solid mechanics there is a clear need to impose stresses upon boundaries. In addition to this, the use of dummy particles to impose a boundary condition is not always suitable or even feasibly, especially for those problems which include internal boundaries. In order to overcome these difficulties, this paper first presents an improved method for applying stress boundary conditions in SPH with dummy particles. This is then followed by a proposal of a formulation which does not require dummy particles. These techniques are then validated against analytical solutions to two common problems in rock mechanics, the Brazilian test and the penny-shaped crack problem both in 2D and 3D. This study highlights the fact that SPH offers a good level of accuracy to solve these problems and that results are reliable. This validation work serves as a foundation for addressing more complex problems involving plasticity and fracture propagation.

  2. Quantum simulation of 2D topological physics in a 1D array of optical cavities.

    PubMed

    Luo, Xi-Wang; Zhou, Xingxiang; Li, Chuan-Feng; Xu, Jin-Shi; Guo, Guang-Can; Zhou, Zheng-Wei

    2015-07-06

    Orbital angular momentum of light is a fundamental optical degree of freedom characterized by unlimited number of available angular momentum states. Although this unique property has proved invaluable in diverse recent studies ranging from optical communication to quantum information, it has not been considered useful or even relevant for simulating nontrivial physics problems such as topological phenomena. Contrary to this misconception, we demonstrate the incredible value of orbital angular momentum of light for quantum simulation by showing theoretically how it allows to study a variety of important 2D topological physics in a 1D array of optical cavities. This application for orbital angular momentum of light not only reduces required physical resources but also increases feasible scale of simulation, and thus makes it possible to investigate important topics such as edge-state transport and topological phase transition in a small simulator ready for immediate experimental exploration.

  3. Comparison between 2D and 3D Numerical Modelling of a hot forging simulative test

    SciTech Connect

    Croin, M.; Ghiotti, A.; Bruschi, S.

    2007-04-07

    The paper presents the comparative analysis between 2D and 3D modelling of a simulative experiment, performed in laboratory environment, in which operating conditions approximate hot forging of a turbine aerofoil section. The plane strain deformation was chosen as an ideal case to analyze the process because of the thickness variations in the final section and the consequent distributions of contact pressure and sliding velocity at the interface that are closed to the conditions of the real industrial process. In order to compare the performances of 2D and 3D approaches, two different analyses were performed and compared with the experiments in terms of loads and temperatures peaks at the interface between the dies and the workpiece.

  4. Spatially Resolved Synthetic Spectra from 2D Simulations of Stainless Steel Wire Array Implosions

    SciTech Connect

    Clark, R. W.; Giuliani, J. L.; Thornhill, J. W.; Chong, Y. K.; Dasgupta, A.; Davis, J.

    2009-01-21

    A 2D radiation MHD model has been developed to investigate stainless steel wire array implosion experiments on the Z and refurbished Z machines. This model incorporates within the Mach2 MHD code a self-consistent calculation of the non-LTE kinetics and ray trace based radiation transport. Such a method is necessary in order to account for opacity effects in conjunction with ionization kinetics of K-shell emitting plasmas. Here the model is used to investigate multi-dimensional effects of stainless steel wire implosions. In particular, we are developing techniques to produce non-LTE, axially and/or radially resolved synthetic spectra based upon snapshots of our 2D simulations. Comparisons between experimental spectra and these synthetic spectra will allow us to better determine the state of the experimental pinches.

  5. Simulation of the flow and mass transfer for KDP crystals undergoing 2D translation during growth

    NASA Astrophysics Data System (ADS)

    Zhou, Chuan; Li, Mingwei; Hu, Zhitao; Yin, Huawei; Wang, Bangguo; Cui, Qidong

    2016-09-01

    In this study, a novel motion mode for crystals during growth, i.e., 2D translation, is proposed. Numerical simulations of flow and mass transfer are conducted for the growth of large-scale potassium dihydrogen phosphate (KDP) crystals subjected to the new motion mode. Surface supersaturation and shear stress are obtained as functions of the translational velocity, distance, size, orientation of crystals. The dependence of these two parameters on the flow fields around the crystals is also discussed. The thicknesses of the solute boundary layer varied with translational velocity are described. The characteristics of solution flow and surface supersaturation distribution are summarized, where it suggests that the morphological stability of a crystal surface can be enhanced if the proposed 2D translation is applied to crystal growth.

  6. 2D radiation-magnetohydrodynamic simulations of SATURN imploding Z-pinches

    SciTech Connect

    Hammer, J.H.; Eddleman, J.L.; Springer, P.T.

    1995-11-06

    Z-pinch implosions driven by the SATURN device at Sandia National Laboratory are modeled with a 2D radiation magnetohydrodynamic (MHD) code, showing strong growth of magneto-Rayleigh Taylor (MRT) instability. Modeling of the linear and nonlinear development of MRT modes predicts growth of bubble-spike structures that increase the time span of stagnation and the resulting x-ray pulse width. Radiation is important in the pinch dynamics keeping the sheath relatively cool during the run-in and releasing most of the stagnation energy. The calculations give x-ray pulse widths and magnitudes in reasonable agreement with experiments, but predict a radiating region that is too dense and radially localized at stagnation. We also consider peaked initial density profiles with constant imploding sheath velocity that should reduce MRT instability and improve performance. 2D krypton simulations show an output x-ray power > 80 TW for the peaked profile.

  7. Application of 2-D simulations to hollow z-pinch implosions

    SciTech Connect

    Peterson, D.L.; Bowers, R.L.; Brownell, J.H.

    1997-12-01

    The application of simulations of z-pinch implosions should have at least two goals: first, to properly model the most important physical processes occurring in the pinch allowing for a better understanding of the experiments and second, provide a design capability for future experiments. Beginning with experiments fielded at Los Alamos on the Pegasus 1 and Pegasus 2 capacitor banks, the authors have developed a methodology for simulating hollow z-pinches in two dimensions which has reproduced important features of the measured experimental current drive, spectrum, radiation pulse shape, peak power and total radiated energy. This methodology employs essentially one free parameter, the initial level of the random density perturbations imposed at the beginning of the 2-D simulation, but in general no adjustments to other parameters are required. Currently the authors are applying this capability to the analysis of recent Saturn and PBFA-Z experiments. The code results provide insight into the nature of the pinch plasma prior to arrival on-axis, during thermalization and development after peak pinch time. Among other things, the simulation results provide an explanation for the production of larger amounts of radiated energy than would be expected from a simple slug-model kinetic energy analysis and the appearance of multiple peaks in the radiation power. The 2-D modeling has also been applied to the analysis of Saturn dynamic hohlraum experiments and is being used in the design of this and other Z-Pinch applications on PBFA-Z.

  8. Fast acceleration of 2D wave propagation simulations using modern computational accelerators.

    PubMed

    Wang, Wei; Xu, Lifan; Cavazos, John; Huang, Howie H; Kay, Matthew

    2014-01-01

    Recent developments in modern computational accelerators like Graphics Processing Units (GPUs) and coprocessors provide great opportunities for making scientific applications run faster than ever before. However, efficient parallelization of scientific code using new programming tools like CUDA requires a high level of expertise that is not available to many scientists. This, plus the fact that parallelized code is usually not portable to different architectures, creates major challenges for exploiting the full capabilities of modern computational accelerators. In this work, we sought to overcome these challenges by studying how to achieve both automated parallelization using OpenACC and enhanced portability using OpenCL. We applied our parallelization schemes using GPUs as well as Intel Many Integrated Core (MIC) coprocessor to reduce the run time of wave propagation simulations. We used a well-established 2D cardiac action potential model as a specific case-study. To the best of our knowledge, we are the first to study auto-parallelization of 2D cardiac wave propagation simulations using OpenACC. Our results identify several approaches that provide substantial speedups. The OpenACC-generated GPU code achieved more than 150x speedup above the sequential implementation and required the addition of only a few OpenACC pragmas to the code. An OpenCL implementation provided speedups on GPUs of at least 200x faster than the sequential implementation and 30x faster than a parallelized OpenMP implementation. An implementation of OpenMP on Intel MIC coprocessor provided speedups of 120x with only a few code changes to the sequential implementation. We highlight that OpenACC provides an automatic, efficient, and portable approach to achieve parallelization of 2D cardiac wave simulations on GPUs. Our approach of using OpenACC, OpenCL, and OpenMP to parallelize this particular model on modern computational accelerators should be applicable to other computational models of

  9. Bernstein copula approach to model direction-length dependency for 2D discrete fracture network simulation

    NASA Astrophysics Data System (ADS)

    Mendoza-Torres, F.; Diaz-Viera, M. A.

    2015-12-01

    In many natural fractured porous media, such as aquifers, soils, oil and geothermal reservoirs, fractures play a crucial role in their flow and transport properties. An approach that has recently gained popularity for modeling fracture systems is the Discrete Fracture Network (DFN) model. This approach consists in applying a stochastic boolean simulation method, also known as object simulation method, where fractures are represented as simplified geometric objects (line segments in 2D and polygons in 3D). One of the shortcomings of this approach is that it usually does not consider the dependency relationships that may exist between the geometric properties of fractures (direction, length, aperture, etc), that is, each property is simulated independently. In this work a method for modeling such dependencies by copula theory is introduced. In particular, a nonparametric model using Bernstein copulas for direction-length fracture dependency in 2D is presented. The application of this method is illustrated in a case study for a fractured rock sample from a carbonate reservoir outcrop.

  10. Simulations of two-particle interactions with 2D quantum walks in time

    SciTech Connect

    Schreiber, A.; Laiho, K.; Silberhorn, C.; Rohde, P. P.; Štefaňak, M.; Potoček, V.; Hamilton, C.; Jex, I.

    2014-12-04

    We present the experimental implementation of a quantum walk on a two-dimensional lattice and show how to employ the optical system to simulate the quantum propagation of two interacting particles. Our quantum walk in time transfers the spatial spread of a quantum walk into the time domain, which guarantees a high stability and scalability of the setup. We present with our device quantum walks over 12 steps on a 2D lattice. By changing the properties of the driving quantum coin, we investigate different kinds of two-particle interactions and reveal their impact on the occurring quantum propagation.

  11. Multipacting Simulation Study for 56 MHz Quarter Wave Resonator using 2D Code

    SciTech Connect

    Naik,D.; Ben-Zvi, I.

    2009-01-02

    A beam excited 56 MHz Radio Frequency (RF) Niobium Quarter Wave Resonator (QWR) has been proposed to enhance RHIC beam luminosity and bunching. Being a RF cavity, multipacting is expected; therefore an extensive study was carried out with the Multipac 2.1 2D simulation code. The study revealed that multipacting occurs in various bands up to peak surface electric field 50 kV/m and is concentrated mostly above the beam gap and on the outer conductor. To suppress multipacting, a ripple structure was introduced to the outer conductor and the phenomenon was successfully eliminated from the cavity.

  12. Tuning and simulating a 193-nm resist for 2D applications

    NASA Astrophysics Data System (ADS)

    Howard, William B.; Wiaux, Vincent; Ercken, Monique; Bui, Bang; Byers, Jeff D.; Pochkowski, Mike

    2002-07-01

    For some applications, the usefulness of lithography simulation results depends strongly on the matching between experimental conditions and the simulation input parameters. If this matching is optimized and other sources of error are minimized, then the lithography model can be used to explain printed wafer experimental results. Further, simulation can be useful in predicting the results or in choosing the correct set of experiments. In this paper, PROLITH and ProDATA AutoTune were used to systematically vary simulation input parameters to match measured results on printed wafers used in a 193 nm process. The validity of the simulation parameters was then checked using 3D simulation compared to 2D top-down SEM images. The quality of matching was evaluated using the 1D metrics of average gate CD and Line End Shortening (LES). To ensure the most accurate simulation, a new approach was taken to create a compound mask from GDSII contextual information surrounding an accurate SEM image of the reticle region of interest. Corrections were made to account for all metrology offsets.

  13. GMC COLLISIONS AS TRIGGERS OF STAR FORMATION. I. PARAMETER SPACE EXPLORATION WITH 2D SIMULATIONS

    SciTech Connect

    Wu, Benjamin; Loo, Sven Van; Tan, Jonathan C.; Bruderer, Simon

    2015-09-20

    We utilize magnetohydrodynamic (MHD) simulations to develop a numerical model for giant molecular cloud (GMC)–GMC collisions between nearly magnetically critical clouds. The goal is to determine if, and under what circumstances, cloud collisions can cause pre-existing magnetically subcritical clumps to become supercritical and undergo gravitational collapse. We first develop and implement new photodissociation region based heating and cooling functions that span the atomic to molecular transition, creating a multiphase ISM and allowing modeling of non-equilibrium temperature structures. Then in 2D and with ideal MHD, we explore a wide parameter space of magnetic field strength, magnetic field geometry, collision velocity, and impact parameter and compare isolated versus colliding clouds. We find factors of ∼2–3 increase in mean clump density from typical collisions, with strong dependence on collision velocity and magnetic field strength, but ultimately limited by flux-freezing in 2D geometries. For geometries enabling flow along magnetic field lines, greater degrees of collapse are seen. We discuss observational diagnostics of cloud collisions, focussing on {sup 13}CO(J = 2–1), {sup 13}CO(J = 3–2), and {sup 12}CO(J = 8–7) integrated intensity maps and spectra, which we synthesize from our simulation outputs. We find that the ratio of J = 8–7 to lower-J emission is a powerful diagnostic probe of GMC collisions.

  14. Strain hardening in 2D discrete dislocation dynamics simulations: A new '2.5D' algorithm

    NASA Astrophysics Data System (ADS)

    Keralavarma, S. M.; Curtin, W. A.

    2016-10-01

    The two-dimensional discrete dislocation dynamics (2D DD) method, consisting of parallel straight edge dislocations gliding on independent slip systems in a plane strain model of a crystal, is often used to study complicated boundary value problems in crystal plasticity. However, the absence of truly three dimensional mechanisms such as junction formation means that forest hardening cannot be modeled, unless additional so-called '2.5D' constitutive rules are prescribed for short-range dislocation interactions. Here, results from three dimensional dislocation dynamics (3D DD) simulations in an FCC material are used to define new constitutive rules for short-range interactions and junction formation between dislocations on intersecting slip systems in 2D. The mutual strengthening effect of junctions on preexisting obstacles, such as precipitates or grain boundaries, is also accounted for in the model. The new '2.5D' DD model, with no arbitrary adjustable parameters beyond those obtained from lower scale simulation methods, is shown to predict athermal hardening rates, differences in flow behavior for single and multiple slip, and latent hardening ratios. All these phenomena are well-established in the plasticity of crystals and quantitative results predicted by the model are in good agreement with experimental observations.

  15. 2D PIC simulations for an EN discharge with magnetized electrons and unmagnetized ions

    NASA Astrophysics Data System (ADS)

    Lieberman, Michael A.; Kawamura, Emi; Lichtenberg, Allan J.

    2009-10-01

    We conducted 2D particle-in-cell (PIC) simulations for an electronegative (EN) discharge with magnetized electrons and unmagnetized ions, and compared the results to a previously developed 1D (radial) analytical model of an EN plasma with strongly magnetized electrons and weakly magnetized ions [1]. In both cases, there is a static uniform applied magnetic field in the axial direction. The 1D radial model mimics the wall losses of the particles in the axial direction by introducing a bulk loss frequency term νL. A special (desired) solution was found in which only positive and negative ions but no electrons escaped radially. The 2D PIC results show good agreement with the 1D model over a range of parameters and indicate that the analytical form of νL employed in [1] is reasonably accurate. However, for the PIC simulations, there is always a finite flux of electrons to the radial wall which is about 10 to 30% of the negative ion flux.[4pt] [1] G. Leray, P. Chabert, A.J. Lichtenberg and M.A. Lieberman, J. Phys. D, accepted for publication 2009.

  16. Ion acoustic wave collapse via two-ion wave decay: 2D Vlasov simulation and theory

    NASA Astrophysics Data System (ADS)

    Chapman, Thomas; Berger, Richard; Banks, Jeffrey; Brunner, Stephan

    2015-11-01

    The decay of ion acoustic waves (IAWs) via two-ion wave decay may transfer energy from the electric field of the IAWs to the particles, resulting in a significant heating of resonant particles. This process has previously been shown in numerical simulations to decrease the plasma reflectivity due to stimulated Brillouin scattering. Two-ion wave decay is a fundamental property of ion acoustic waves that occurs over most if not all of the parameter space of relevance to inertial confinement fusion experiments, and can lead to a sudden collapse of IAWs. The treatment of all species kinetically, and in particular the electrons, is required to describe the decay process correctly. We present fully kinetic 2D+2V Vlasov simulations of IAWs undergoing decay to a highly nonlinear turbulent state using the code LOKI. The scaling of the decay rate with characteristic plasma parameters and wave amplitude is shown. A new theory describing two-ion wave decay in 2D, that incorporates key kinetic properties of the electrons, is presented and used to explain quantitatively for the first time the observed decay of IAWs. Work performed under auspices of U.S. DoE by LLNL, Contract DE-AC52-07NA2734. Funded by LDRD 15-ERD-038 and supported by LLNL Grand Challenge allocation.

  17. Calibration and simulation of ASM2d at different temperatures in a phosphorus removal pilot plant.

    PubMed

    García-Usach, F; Ferrer, J; Bouzas, A; Seco, A

    2006-01-01

    In this work, an organic and nutrient removal pilot plant was used to study the temperature influence on phosphorus accumulating organisms. Three experiments were carried out at 13, 20 and 24.5 degrees C, achieving a high phosphorus removal percentage in all cases. The ASM2d model was calibrated at 13 and 20 degrees C and the Arrhenius equation constant was obtained for phosphorus removal processes showing that the temperature influences on the biological phosphorus removal subprocesses in a different degree. The 24.5 degrees C experiment was simulated using the model parameters obtained by means of the Arrhenius equation. The simulation results for the three experiments showed good correspondence with the experimental data, demonstrating that the model and the calibrated parameters were able to predict the pilot plant behaviour.

  18. Superclusters of galaxies from the 2dF redshift survey. 2. Comparison with simulations

    SciTech Connect

    Einasto, Jaan; Einasto, M.; Saar, E.; Tago, E.; Liivamagi, L.J.; Joeveer, M.J; Suhhonenko, I.; Hutsi, G.; Jaaniste, J.; Heinamaki, P.; Muller, V.; Knebe, A.; Tucker, D.; /Fermilab

    2006-04-01

    We investigate properties of superclusters of galaxies found on the basis of the 2dF Galaxy Redshift Survey, and compare them with properties of superclusters from the Millennium Simulation.We study the dependence of various characteristics of superclusters on their distance from the observer, on their total luminosity, and on their multiplicity. The multiplicity is defined by the number of Density Field (DF) clusters in superclusters. Using the multiplicity we divide superclusters into four richness classes: poor, medium, rich and extremely rich.We show that superclusters are asymmetrical and have multi-branching filamentary structure, with the degree of asymmetry and filamentarity being higher for the more luminous and richer superclusters. The comparison of real superclusters with Millennium superclusters shows that most properties of simulated superclusters agree very well with real data, the main differences being in the luminosity and multiplicity distributions.

  19. Comparative modeling of vertical and planar organic phototransistors with 2D drift-diffusion simulations

    NASA Astrophysics Data System (ADS)

    Bezzeccheri, E.; Colasanti, S.; Falco, A.; Liguori, R.; Rubino, A.; Lugli, P.

    2016-05-01

    Vertical Organic Transistors and Phototransistors have been proven to be promising technologies due to the advantages of reduced channel length and larger sensitive area with respect to planar devices. Nevertheless, a real improvement of their performance is subordinate to the quantitative description of their operation mechanisms. In this work, we present a comparative study on the modeling of vertical and planar Organic Phototransistor (OPT) structures. Computer-based simulations of the devices have been carried out with Synopsys Sentaurus TCAD in a 2D Drift-Diffusion framework. The photoactive semiconductor material has been modeled using the virtual semiconductor approach as the archetypal P3HT:PC61BM bulk heterojunction. It has been found that both simulated devices have comparable electrical and optical characteristics, accordingly to recent experimental reports on the subject.

  20. Highly-resolved 2D HYDRA simulations of Double-Shell Ignition Designs

    SciTech Connect

    Milovich, J L; Amendt, P; Hamza, A; Marinak, M; Robey, H

    2006-06-30

    Double-shell (DS) targets (Amendt, P. A. et al., 2002) offer a complementary approach to the cryogenic baseline design (Lindl, J. et al., 2004) for achieving ignition on the National Ignition Facility (NIF). Among the expected benefits are the ease of room temperature preparation and fielding, the potential for lower laser backscatter and the reduced need for careful shock timing. These benefits are offset, however, by demanding fabrication tolerances, e.g., shell concentricity and shell surface smoothness. In particular, the latter is of paramount importance since DS targets are susceptible to the growth of interface perturbations from impulsive and time-dependent accelerations. Previous work (Milovich, J. L. et al., 2004) has indicated that the growth of perturbations on the outer surface of the inner shell is potentially disruptive. To control this instability new designs have been proposed requiring bimetallic inner shells and material-matching mid-Z nanoporous foam. The challenges in manufacturing such exotic foams have led to a further evaluation of the densities and pore sizes needed to reduce the seeding of perturbations on the outer surface of the inner shell, thereby guiding the ongoing material science research efforts. Highly-resolved 2D simulations of porous foams have been performed to establish an upper limit on the allowable pore sizes for instability growth. Simulations indicate that foams with higher densities than previously thought are now possible. Moreover, while at the present time we are only able to simulate foams with average pore sizes larger than 1 micron (due to computational limitations), we can conclude that these pore sizes are potentially problematic. Furthermore, the effect of low-order hohlraum radiation asymmetries on the growth of intrinsic surface perturbations is also addressed. Highly-resolved 2D simulations indicate that the transverse flows that are set up by these low-order mode features (which can excite Kelvin

  1. Reynolds-Averaged Navier-Stokes Simulation of a 2D Circulation Control Wind Tunnel Experiment

    NASA Technical Reports Server (NTRS)

    Allan, Brian G.; Jones, Greg; Lin, John C.

    2011-01-01

    Numerical simulations are performed using a Reynolds-averaged Navier-Stokes (RANS) flow solver for a circulation control airfoil. 2D and 3D simulation results are compared to a circulation control wind tunnel test conducted at the NASA Langley Basic Aerodynamics Research Tunnel (BART). The RANS simulations are compared to a low blowing case with a jet momentum coefficient, C(sub u), of 0:047 and a higher blowing case of 0.115. Three dimensional simulations of the model and tunnel walls show wall effects on the lift and airfoil surface pressures. These wall effects include a 4% decrease of the midspan sectional lift for the C(sub u) 0.115 blowing condition. Simulations comparing the performance of the Spalart Allmaras (SA) and Shear Stress Transport (SST) turbulence models are also made, showing the SST model compares best to the experimental data. A Rotational/Curvature Correction (RCC) to the turbulence model is also evaluated demonstrating an improvement in the CFD predictions.

  2. Spot size variation FCS in simulations of the 2D Ising model

    NASA Astrophysics Data System (ADS)

    Burns, Margaret C.; Nouri, Mariam; Veatch, Sarah L.

    2016-06-01

    Spot variation fluorescence correlation spectroscopy (svFCS) was developed to study the movement and organization of single molecules in plasma membranes. This experimental technique varies the size of an illumination area while measuring correlations in time using standard fluorescence correlation methods. Frequently, this data is interpreted using the assumption that correlation measurements reflect the dynamics of single molecule motions, and not motions of the average composition. Here, we explore how svFCS measurements report on the dynamics of components diffusing within simulations of a 2D Ising model with a conserved order parameter. Simulated correlation functions report on both the fast dynamics of single component mobility and the slower dynamics of the average composition. Over a range of simulation conditions, a conventional svFCS analysis suggests the presence of anomalous diffusion even though single molecule motions are nearly Brownian in these simulations. This misinterpretation is most significant when the surface density of the fluorescent label is elevated, therefore we suggest future measurements be made over a range of tracer densities. Some simulation conditions reproduce qualitative features of published svFCS experimental data. Overall, this work emphasizes the need to probe membranes using multiple complimentary experimental methodologies in order to draw conclusions regarding the nature of spatial and dynamical heterogeneity in these systems.

  3. Tropical Oceanic Precipitation Processes over Warm Pool: 2D and 3D Cloud Resolving Model Simulations

    NASA Technical Reports Server (NTRS)

    Tao, W.- K.; Johnson, D.

    1998-01-01

    Rainfall is a key link in the hydrologic cycle as well as the primary heat source for the atmosphere, The vertical distribution of convective latent-heat release modulates the large-scale circulations of the tropics, Furthermore, changes in the moisture distribution at middle and upper levels of the troposphere can affect cloud distributions and cloud liquid water and ice contents. How the incoming solar and outgoing longwave radiation respond to these changes in clouds is a major factor in assessing climate change. Present large-scale weather and climate models simulate cloud processes only crudely, reducing confidence in their predictions on both global and regional scales. One of the most promising methods to test physical parameterizations used in General Circulation Models (GCMS) and climate models is to use field observations together with Cloud Resolving Models (CRMs). The CRMs use more sophisticated and physically realistic parameterizations of cloud microphysical processes, and allow for their complex interactions with solar and infrared radiative transfer processes. The CRMs can reasonably well resolve the evolution, structure, and life cycles of individual clouds and cloud systems, The major objective of this paper is to investigate the latent heating, moisture and momenti,im budgets associated with several convective systems developed during the TOGA COARE IFA - westerly wind burst event (late December, 1992). The tool for this study is the Goddard Cumulus Ensemble (CCE) model which includes a 3-class ice-phase microphysical scheme, The model domain contains 256 x 256 grid points (using 2 km resolution) in the horizontal and 38 grid points (to a depth of 22 km depth) in the vertical, The 2D domain has 1024 grid points. The simulations are performed over a 7 day time period. We will examine (1) the precipitation processes (i.e., condensation/evaporation) and their interaction with warm pool; (2) the heating and moisture budgets in the convective and

  4. Numerical simulation of 2D buoyant jets in ice-covered and temperature-stratified water

    NASA Astrophysics Data System (ADS)

    Gu, Ruochuan

    A two-dimensional (2D) unsteady simulation model is applied to the problem of a submerged warm water discharge into a stratified lake or reservoir with an ice cover. Numerical simulations and analyses are conducted to gain insight into large-scale convective recirculation and flow processes in a cold waterbody induced by a buoyant jet. Jet behaviors under various discharge temperatures are captured by directly modeling flow and thermal fields. Flow structures and processes are described by the simulated spatial and temporal distributions of velocity and temperature in various regions: deflection, recirculation, attachment, and impingement. Some peculiar hydrothermal and dynamic features, e.g. reversal of buoyancy due to the dilution of a warm jet by entraining cold ambient water, are identified and examined. Simulation results show that buoyancy is the most important factor controlling jet behavior and mixing processes. The inflow boundary is treated as a liquid wall from which the jet is offset. Similarity and difference in effects of boundaries perpendicular and parallel to flow, and of buoyancy on jet attachment and impingement, are discussed. Symmetric flow configuration is used to de-emphasize the Coanda effect caused by offset.

  5. Rise characteristics of gas bubbles in a 2D rectangular column: VOF simulations vs experiments

    SciTech Connect

    Krishna, R.; Baten, J.M. van

    1999-10-01

    About five centuries ago, Leonardo da Vinci described the sinuous motion of gas bubbles rising in water. The authors have attempted to simulate the rise trajectories of bubbles of 4, 5, 7, 8, 9, 12, and 20 mm in diameter rising in a 2D rectangular column filled with water. The simulations were carried out using the volume-of-fluid (VOF) technique developed by Hirt and Nichols (J. Computational Physics, 39, 201--225 (1981)). To solve the Navier-Stokes equations of motion the authors used a commercial solver, CFX 4.1c of AEA Technology, UK. They developed their own bubble-tracking algorithm to capture sinuous bubble motions. The 4 and 5 mm bubbles show large lateral motions observed by Da Vinci. The 7, 8 and 9 mm bubble behave like jellyfish. The 12 mm bubble flaps its wings like a bird. The extent of lateral motion of the bubbles decreases with increasing bubble size. Bubbles larger than 20 mm in size assume a spherical cap form and simulations of the rise characteristics match experiments exactly. VOF simulations are powerful tools for a priori determination of the morphology and rise characteristics of bubbles rising in a liquid. Bubble-bubble interactions are also properly modeled by the VOF technique.

  6. Simulation of growth normal fault sandbox tests using the 2D discrete element method

    NASA Astrophysics Data System (ADS)

    Chu, Sheng-Shin; Lin, Ming-Lang; Huang, Wen-Chao; Nien, Wei-Tung; Liu, Huan-Chi; Chan, Pei-Chen

    2015-01-01

    A fault slip can cause the deformation of shallow soil layers and destroy infrastructures. The Shanchiao Fault on the west side of the Taipei Basin is one such fault. The activities of the Shanchiao Fault have caused the quaternary sediment beneath the Taipei Basin to become deformed, damaging structures, traffic construction, and utility lines in the area. Data on geological drilling and dating have been used to determine that a growth fault exists in the Shanchiao Fault. In an experiment, a sandbox model was built using noncohesive sandy soil to simulate the existence of a growth fault in the Shanchiao Fault and forecast the effect of the growth fault on shear-band development and ground differential deformation. The experimental results indicated that when a normal fault contains a growth fault at the offset of the base rock, the shear band develops upward beside the weak side of the shear band of the original-topped soil layer, and surfaces considerably faster than that of the single-topped layer. The offset ratio required is approximately one-third that of the single-cover soil layer. In this study, a numerical simulation of the sandbox experiment was conducted using a discrete element method program, PFC2D, to simulate the upper-covering sand layer shear-band development pace and the scope of a growth normal fault slip. The simulation results indicated an outcome similar to that of the sandbox experiment, which can be applied to the design of construction projects near fault zones.

  7. 2-D LSP Simulations of the Self Magnetic Pinch Radiographic Diode

    NASA Astrophysics Data System (ADS)

    Threadgold, J.; Crotch, I.; Rose, D. V.

    2003-10-01

    The Atomic Weapons Establishment (AWE) UK has a number of Pulsed Power driven flash X-ray machines which are used to take transmission radiographs of hydrodynamic experiments. Some of the lower voltage x-ray machines (< 2 MV) use the Self Magnetic (SM) Pinch diode for their source. The SM pinch diode has proved to be a reliable source for providing small diameter radiographic spot sizes. With an emphasis on reduction of the x-ray spot size at higher voltages, one part of the diode research project has been to field SM pinch diodes at higher voltages. The SM pinch diode relies upon the magnitude of its own electron current (> 50 kA) to pinch the electron beam to a small diameter onto a high Z converter target. An electromagnetic PIC code, LSP, has been used to carry out 2-D simulations of the diode to support this project. The code has been used to investigate the effect of different target materials within the diode and to investigate the resultant electron trajectories onto the target. Results of these code simulations will be compared to experimental data The simulations show good agreement with measured experimental data on diode performance. The simulations suggest further improvements in spot size reduction could be achieved with changes in the diode geometry.

  8. 2D/3D Monte Carlo Feature Profile Simulator FPS-3D

    NASA Astrophysics Data System (ADS)

    Moroz, Paul

    2010-11-01

    Numerical simulation of etching/deposition profiles is important for semiconductor industry, as it allows analysis and prediction of the outcome of materials processing on a micron and sub-micron scale. The difficulty, however, is in making such a simulator a reliable, general, and easy to use tool applicable to different situations, for example, with different ratios of ion to neutral fluxes, different chemistries, different energies of incoming particles, and different angular and energy dependencies for surface reactions, without recompiling the code each time when the parameters change. The FPS-3D simulator [1] does not need recompilation when the features, materials, gases, or plasma are changed -- modifications to input, chemistry, and flux files are enough. The code allows interaction of neutral low-energy species with the surface mono-layer, while considering finite penetration depth into the volume for fast particles and ions. The FPS-3D code can simulate etching and deposition processes, both for 2D and 3D geometries. FPS-3D is using an advanced graphics package from HFS for presenting real-time process and profile evolution. The presentation will discuss the FPS-3D code with examples for different process conditions. The author is thankful to Drs. S.-Y. Kang of TEL TDC and P. Miller of HFS for valuable discussions. [4pt] [1] P. Moroz, URP.00101, GEC, Saratoga, NY, 2009.

  9. 2D simulations of the line-driven instability in hot-star winds. II. Approximations for the 2D radiation force

    NASA Astrophysics Data System (ADS)

    Dessart, L.; Owocki, S. P.

    2005-07-01

    We present initial attempts to include the multi-dimensional nature of radiation transport in hydrodynamical simulations of the small-scale structure that arises from the line-driven instability in hot-star winds. Compared to previous 1D or 2D models that assume a purely radial radiation force, we seek additionally to treat the lateral momentum and transport of diffuse line-radiation, initially here within a 2D context. A key incentive is to study the damping effect of the associated diffuse line-drag on the dynamical properties of the flow, focusing particularly on whether this might prevent lateral break-up of shell structures at scales near the lateral Sobolev angle of ca. 1^o. Based on 3D linear perturbation analyses that show a viscous diffusion character for the damping at these scales, we first explore nonlinear simulations that cast the lateral diffuse force in the simple, local form of a parallel viscosity. We find, however, that the resulting strong damping of lateral velocity fluctuations only further isolates azimuthal zones, leading again to azimuthal incoherence down to the grid scale. To account then for the further effect of lateral mixing of radiation associated with the radial driving, we next explore models in which the radial force is azimuthally smoothed over a chosen scale, and thereby show that this does indeed translate to a similar scale for the resulting density and velocity structure. Accounting for both the lateral line-drag and the lateral mixing in a more self-consistent way thus requires a multi-ray computation of the radiation transport. As a first attempt, we explore further a method first proposed by Owocki (1999), which uses a restricted 3-ray approach that combines a radial ray with two oblique rays set to have an impact parameter p < Rast within the stellar core. From numerical simulations with various grid resolutions (and p), we find that, compared to equivalent 1-ray simulations, the high-resolution 3-ray models show

  10. Multiple Frequency Contrast Source Inversion Method for Vertical Electromagnetic Profiling: 2D Simulation Results and Analyses

    NASA Astrophysics Data System (ADS)

    Li, Jinghe; Song, Linping; Liu, Qing Huo

    2016-02-01

    A simultaneous multiple frequency contrast source inversion (CSI) method is applied to reconstructing hydrocarbon reservoir targets in a complex multilayered medium in two dimensions. It simulates the effects of a salt dome sedimentary formation in the context of reservoir monitoring. In this method, the stabilized biconjugate-gradient fast Fourier transform (BCGS-FFT) algorithm is applied as a fast solver for the 2D volume integral equation for the forward computation. The inversion technique with CSI combines the efficient FFT algorithm to speed up the matrix-vector multiplication and the stable convergence of the simultaneous multiple frequency CSI in the iteration process. As a result, this method is capable of making quantitative conductivity image reconstruction effectively for large-scale electromagnetic oil exploration problems, including the vertical electromagnetic profiling (VEP) survey investigated here. A number of numerical examples have been demonstrated to validate the effectiveness and capacity of the simultaneous multiple frequency CSI method for a limited array view in VEP.

  11. Catalog of velocity distributions around a reconnection site in 2D PIC simulations

    NASA Astrophysics Data System (ADS)

    Lechner, Lukas; Bourdin, Philippe-A.; Nakamura, Takuma K. M.; Nakamura, Rumi; Narita, Yasuhito

    2016-04-01

    The velocity distribution of electrons and ions are known to be a marker for regions where magnetic reconnection develops. Past theoretical and computational works demonstrated that non-gyrotropic and anisotropic distributions depending on particle meandering motions and accelerations are seen around the reconnection point. The Magnetospheric Multiscale (MMS) mission is expected to resolve such kinetic scale reconnection regions. We present a catalog of velocity distribution functions that can give hints on the location within the current sheet relative to the reconnection point, which is sometimes unclear from pure spacecraft observations. We use 2D PIC simulations of anti-parallel magnetic reconnection to obtain velocity distributions at different locations, like in the center of the reconnection site, the ion and electron diffusion regions, or the reconnection inflow and outflow regions. With sufficiently large number of particles we resolve the distribution functions also in rather small regions. Such catalog may be compared with future MMS observations of the Earth's magnetotail.

  12. Relaxation of ferroelectric states in 2D distributions of quantum dots: EELS simulation

    NASA Astrophysics Data System (ADS)

    Cortés, C. M.; Meza-Montes, L.; Moctezuma, R. E.; Carrillo, J. L.

    2016-06-01

    The relaxation time of collective electronic states in a 2D distribution of quantum dots is investigated theoretically by simulating EELS experiments. From the numerical calculation of the probability of energy loss of an electron beam, traveling parallel to the distribution, it is possible to estimate the damping time of ferroelectric-like states. We generate this collective response of the distribution by introducing a mean field interaction among the quantum dots, and then, the model is extended incorporating effects of long-range correlations through a Bragg-Williams approximation. The behavior of the dielectric function, the energy loss function, and the relaxation time of ferroelectric-like states is then investigated as a function of the temperature of the distribution and the damping constant of the electronic states in the single quantum dots. The robustness of the trends and tendencies of our results indicate that this scheme of analysis can guide experimentalists to develop tailored quantum dots distributions for specific applications.

  13. Assessment of Flood Mitigation Solutions Using a Hydrological Model and Refined 2D Hydrodynamic Simulations

    NASA Astrophysics Data System (ADS)

    Khuat Duy, B.; Archambeau, P.; Dewals, B. J.; Erpicum, S.; Pirotton, M.

    2009-04-01

    Following recurrent inundation problems on the Berwinne catchment, in Belgium, a combined hydrologic and hydrodynamic study has been carried out in order to find adequate solutions for the floods mitigation. Thanks to detailed 2D simulations, the effectiveness of the solutions can be assessed not only in terms of discharge and height reductions in the river, but also with other aspects such as the inundated surfaces reduction and the decrease of inundated buildings and roads. The study is carried out in successive phases. First, the hydrological runoffs are generated using a physically based and spatially distributed multi-layer model solving depth-integrated equations for overland flow, subsurface flow and baseflow. Real floods events are simulated using rainfall series collected at 8 stations (over 20 years of available data). The hydrological inputs are routed through the river network (and through the sewage network if relevant) with the 1D component of the modelling system, which solves the Saint-Venant equations for both free-surface and pressurized flows in a unified way. On the main part of the river, the measured river cross-sections are included in the modelling, and existing structures along the river (such as bridges, sluices or pipes) are modelled explicitely with specific cross sections. Two gauging stations with over 15 years of continuous measurements allow the calibration of both the hydrologic and hydrodynamic models. Second, the flood mitigation solutions are tested in the simulations in the case of an extreme flooding event, and their effects are assessed using detailed 2D simulations on a few selected sensitive areas. The digital elevation model comes from an airborne laser survey with a spatial resolution of 1 point per square metre and is completed in the river bed with a bathymetry interpolated from cross-section data. The upstream discharge is extracted from the 1D simulation for the selected rainfall event. The study carried out with this

  14. A new model for two-dimensional numerical simulation of pseudo-2D gas-solids fluidized beds

    SciTech Connect

    Li, Tingwen; Zhang, Yongmin

    2013-10-11

    Pseudo-two dimensional (pseudo-2D) fluidized beds, for which the thickness of the system is much smaller than the other two dimensions, is widely used to perform fundamental studies on bubble behavior, solids mixing, or clustering phenomenon in different gas-solids fluidization systems. The abundant data from such experimental systems are very useful for numerical model development and validation. However, it has been reported that two-dimensional (2D) computational fluid dynamic (CFD) simulations of pseudo-2D gas-solids fluidized beds usually predict poor quantitative agreement with the experimental data, especially for the solids velocity field. In this paper, a new model is proposed to improve the 2D numerical simulations of pseudo-2D gas-solids fluidized beds by properly accounting for the frictional effect of the front and back walls. Two previously reported pseudo-2D experimental systems were simulated with this model. Compared to the traditional 2D simulations, significant improvements in the numerical predictions have been observed and the predicted results are in better agreement with the available experimental data.

  15. Hall-Effect Thruster Simulations with 2-D Electron Transport and Hydrodynamic Ions

    NASA Technical Reports Server (NTRS)

    Mikellides, Ioannis G.; Katz, Ira; Hofer, Richard H.; Goebel, Dan M.

    2009-01-01

    A computational approach that has been used extensively in the last two decades for Hall thruster simulations is to solve a diffusion equation and energy conservation law for the electrons in a direction that is perpendicular to the magnetic field, and use discrete-particle methods for the heavy species. This "hybrid" approach has allowed for the capture of bulk plasma phenomena inside these thrusters within reasonable computational times. Regions of the thruster with complex magnetic field arrangements (such as those near eroded walls and magnets) and/or reduced Hall parameter (such as those near the anode and the cathode plume) challenge the validity of the quasi-one-dimensional assumption for the electrons. This paper reports on the development of a computer code that solves numerically the 2-D axisymmetric vector form of Ohm's law, with no assumptions regarding the rate of electron transport in the parallel and perpendicular directions. The numerical challenges related to the large disparity of the transport coefficients in the two directions are met by solving the equations in a computational mesh that is aligned with the magnetic field. The fully-2D approach allows for a large physical domain that extends more than five times the thruster channel length in the axial direction, and encompasses the cathode boundary. Ions are treated as an isothermal, cold (relative to the electrons) fluid, accounting for charge-exchange and multiple-ionization collisions in the momentum equations. A first series of simulations of two Hall thrusters, namely the BPT-4000 and a 6-kW laboratory thruster, quantifies the significance of ion diffusion in the anode region and the importance of the extended physical domain on studies related to the impact of the transport coefficients on the electron flow field.

  16. Simulation of Pyroclastic Flows of Colima Volcano, Mexico, Using the TITAN2D Program

    NASA Astrophysics Data System (ADS)

    Rupp, B.; Bursik, M.; Patra, A.; Pitman, B.; Bauer, A.; Nichita, C.; Saucedo, R.; Macias, J.

    2003-04-01

    A new numerical code for simulating granular avalanches, TITAN2D, was used to model block-and-ash flows from the 1991-1999 eruptions of Colima Volcano, Mexico. The block-and-ash flows were simulated on a gridded Digital Elevation Model(DEM), which was prepared and imported using a standard GIS function library (GRASS). The TITAN2D program is based upon a model for an incompressible Coulomb continuum, a 'shallow-water' granular flow. The conservation equations for mass and momentum are solved with a Coulomb-type friction term at the interface between the granular material and the basal surface. It is assumed that conservation of energy can be neglected to first order because the coarse grain size typical of the basal avalanche results in minimal thermal effects on avalanche propagation. The resulting hyperbolic system of equations is solved using a parallel, adaptive mesh, Godunov scheme. The Message Passing Interface (MPI) API allows for computing on multiple processors, which increases computational power, decreases computing time, and allows the use of large data sets. Adaptive gridding allows for the concentration of computing power on regions of special interest. Mesh refinement captures the leading edge of the avalanche, as well as locations where the topography changes rapidly. Mesh unrefinement is applied where solution values are relatively constant or small. There were thousands of rockfalls and numerous block-and-ash flows during the 1991-1999 eruptions of Colima Volcano, with volumes ranging from a few cubic meters to 10^6 m^3. We have records of numerous flows, which include volume, run out distance, deposit area, and in some cases a videotape record of flow propagation. The flows originated from a vent plugging dome, lava flows or minor column collapse. All flows followed cross-slope concavities on the upper edifice, and channels or relative topographic lows on the lower edifice. The flows propagated for distances up to 4 km from the source. We are

  17. A hybrid Boundary Element Unstructured Transmission-line (BEUT) method for accurate 2D electromagnetic simulation

    NASA Astrophysics Data System (ADS)

    Simmons, Daniel; Cools, Kristof; Sewell, Phillip

    2016-11-01

    Time domain electromagnetic simulation tools have the ability to model transient, wide-band applications, and non-linear problems. The Boundary Element Method (BEM) and the Transmission Line Modeling (TLM) method are both well established numerical techniques for simulating time-varying electromagnetic fields. The former surface based method can accurately describe outwardly radiating fields from piecewise uniform objects and efficiently deals with large domains filled with homogeneous media. The latter volume based method can describe inhomogeneous and non-linear media and has been proven to be unconditionally stable. Furthermore, the Unstructured TLM (UTLM) enables modelling of geometrically complex objects by using triangular meshes which removes staircasing and unnecessary extensions of the simulation domain. The hybridization of BEM and UTLM which is described in this paper is named the Boundary Element Unstructured Transmission-line (BEUT) method. It incorporates the advantages of both methods. The theory and derivation of the 2D BEUT method is described in this paper, along with any relevant implementation details. The method is corroborated by studying its correctness and efficiency compared to the traditional UTLM method when applied to complex problems such as the transmission through a system of Luneburg lenses and the modelling of antenna radomes for use in wireless communications.

  18. Simulation of abrasive flow machining process for 2D and 3D mixture models

    NASA Astrophysics Data System (ADS)

    Dash, Rupalika; Maity, Kalipada

    2015-12-01

    Improvement of surface finish and material removal has been quite a challenge in a finishing operation such as abrasive flow machining (AFM). Factors that affect the surface finish and material removal are media viscosity, extrusion pressure, piston velocity, and particle size in abrasive flow machining process. Performing experiments for all the parameters and accurately obtaining an optimized parameter in a short time are difficult to accomplish because the operation requires a precise finish. Computational fluid dynamics (CFD) simulation was employed to accurately determine optimum parameters. In the current work, a 2D model was designed, and the flow analysis, force calculation, and material removal prediction were performed and compared with the available experimental data. Another 3D model for a swaging die finishing using AFM was simulated at different viscosities of the media to study the effects on the controlling parameters. A CFD simulation was performed by using commercially available ANSYS FLUENT. Two phases were considered for the flow analysis, and multiphase mixture model was taken into account. The fluid was considered to be a

  19. Radioactive Sediment Transport on Ogaki Dam Reservoir in Fukushima Evacuated Zone: Numerical Simulation Studies by 2-D River Simulation Code

    NASA Astrophysics Data System (ADS)

    Yamada, Susumu; Kitamura, Akihiro; Kurikami, Hiroshi; Machida, Masahiko

    2015-04-01

    Fukushima Daiichi Nuclear Power Plant (FDNPP) accident on March 2011 released significant quantities of radionuclides to atmosphere. The most significant nuclide is radioactive cesium isotopes. Therefore, the movement of the cesium is one of the critical issues for the environmental assessment. Since the cesium is strongly sorbed by soil particles, the cesium transport can be regarded as the sediment transport which is mainly brought about by the aquatic system such as a river and a lake. In this research, our target is the sediment transport on Ogaki dam reservoir which is located in about 16 km northwest from FDNPP. The reservoir is one of the principal irrigation dam reservoirs in Fukushima Prefecture and its upstream river basin was heavily contaminated by radioactivity. We simulate the sediment transport on the reservoir using 2-D river simulation code named Nays2D originally developed by Shimizu et al. (The latest version of Nays2D is available as a code included in iRIC (http://i-ric.org/en/), which is a river flow and riverbed variation analysis software package). In general, a 2-D simulation code requires a huge amount of calculation time. Therefore, we parallelize the code and execute it on a parallel computer. We examine the relationship between the behavior of the sediment transport and the height of the reservoir exit. The simulation result shows that almost all the sand that enter into the reservoir deposit close to the entrance of the reservoir for any height of the exit. The amounts of silt depositing within the reservoir slightly increase by raising the height of the exit. However, that of the clay dramatically increases. Especially, more than half of the clay deposits, if the exit is sufficiently high. These results demonstrate that the water level of the reservoir has a strong influence on the amount of the clay discharged from the reservoir. As a result, we conclude that the tuning of the water level has a possibility for controlling the

  20. Resistive MHD and kinetic simulations of 2D magnetotail equilibria leading to reconnection onset

    NASA Astrophysics Data System (ADS)

    Merkin, V. G.; Sitnov, M. I.; Lyon, J.; Cassak, P.

    2013-12-01

    Recent progress in theory and fully kinetic particle-in-cell simulations of 2D magnetotail-like configurations has revealed an important class of equilibria, which can be unstable to ion tearing instability and eventually result in explosive dissipation of energy, fast plasma sheet flows, dipolarizations and changes in initial magnetic topology (reconnection). Such configurations are characterized by an increase of magnetic flux at the tailward end of the equilibrium state. While the instability and subsequent reconfiguration of the initial state exhibit kinetic signatures, the question remains, which parts of the process can be reproduced using reduced plasma models, e.g., resistive and Hall MHD. In this presentation we explore the stability of the new class of magnetotail equilibria to the resistive tearing mode and investigate its properties as a function of equilibrium parameters, e.g., the current sheet thickness and the amount of flux accumulation at the tailward end of the equilibrium, as well as other system parameters, e.g., resistivity and Lundquist number. We discuss comparative aspects of the system behavior in kinetic and resistive MHD simulations, in particular, what, if any, parameters of the MHD system lead to similar growth rates of the instability. Since the theoretical onset condition of the kinetic tearing mode can be expressed fully in MHD terms, we also investigate the effects of including this criterion as an additional constraint on the tearing onset in our resistive MHD simulations. This work is a first step toward inclusion of a kinetically-motivated description of reconnection onset in global MHD simulations of the magnetosphere.

  1. Simulation and analysis of solute transport in 2D fracture/pipe networks: the SOLFRAC program.

    PubMed

    Bodin, Jacques; Porel, Gilles; Delay, Fred; Ubertosi, Fabrice; Bernard, Stéphane; de Dreuzy, Jean-Raynald

    2007-01-01

    The Time Domain Random Walk (TDRW) method has been recently developed by Delay and Bodin [Delay, F. and Bodin, J., 2001. Time domain random walk method to simulate transport by advection-dispersion and matrix diffusion in fracture networks. Geophys. Res. Lett., 28(21): 4051-4054.] and Bodin et al. [Bodin, J., Porel, G. and Delay, F., 2003c. Simulation of solute transport in discrete fracture networks using the time domain random walk method. Earth Planet. Sci. Lett., 6566: 1-8.] for simulating solute transport in discrete fracture networks. It is assumed that the fracture network can reasonably be represented by a network of interconnected one-dimensional pipes (i.e. flow channels). Processes accounted for are: (1) advection and hydrodynamic dispersion in the channels, (2) matrix diffusion, (3) diffusion into stagnant zones within the fracture planes, (4) sorption reactions onto the fracture walls and in the matrix, (5) linear decay, and (6) mass sharing at fracture intersections. The TDRW method is handy and very efficient in terms of computation costs since it allows for the one-step calculation of the particle residence time in each bond of the network. This method has been programmed in C++, and efforts have been made to develop an efficient and user-friendly software, called SOLFRAC. This program is freely downloadable at the URL (labo.univ-poitiers.fr/hydrasa/intranet/telechargement.htm). It calculates solute transport into 2D pipe networks, while considering different types of injections and different concepts of local dispersion within each flow channel. Post-simulation analyses are also available, such as the mean velocity or the macroscopic dispersion at the scale of the entire network. The program may be used to evaluate how a given transport mechanism influences the macroscopic transport behaviour of fracture networks. It may also be used, as is the case, e.g., with analytical solutions, to interpret laboratory or field tracer test experiments performed

  2. 2-D Three Fluid Simulation of Upstreaming Ions Above Auroral Precipitation

    NASA Astrophysics Data System (ADS)

    Danielides, M. A.; Lummerzheim, D.; Otto, A.; Stevens, R. J.

    2006-12-01

    The ionosphere is a rich reservoir of charged particles from which a variable fraction is transported to the magnetosphere. An important transport phenomena is the formation of upward ion flow above auroral structure. A primary region of the outflow is not known, but contributions come from polar cap, dayside cusp/cleft region, auroral oval, or even from mid-latitudes. In the past global magnetospheric models and fluid codes were used to simulate large scale ion outflow above, e.g., the polar-cap aurora. However, satellites orbiting at low- altitudes have repeatingly detected localized ion outflow above the auroral oval. Ionosphere-magnetosphere coupling simulations gave first insides into the small-scale dynamics of aurora. The aim of this study is the investigation of coupled plasma and neutral dynamics in smaller scale aurora to explain the generation, structure, and dynamics of vertical ion upstream. We consider auroral electron precipitation at ionospheric heights in a 2-D three fluid ionospheric-magnetospheric coupling code (Otto and Zhu, 2003). Specially we examine the effects of the electron precipitation, heat conduction and heating in field- aligned current through coulomb collisions or turbulence causing: i) electron heating, ii) electron pressure gradients, and iii) upstreaming of ions through a resulting ambipolar electric field. Our first case studies are performed for different boundary conditions and for different auroral electron precipitation parameters (variation in characteristic auroral energy, auroral energy flux and horizontal scale). The results shall clarify how auroral precipitation can drive ions upwards. Finally we discuss the effect of ion drag and the interaction of the upstreaming ions with a stable neutral constituent. Otto, O. and H. Zhu, Fluid plasma simulation of coupled systems: Ionosphere and magnetosphere, Space Plasma Simulation. Edited by J. Buechner, C. Dum, and M. Scholer., Lecture Notes in Physics, vol. 615, p.193

  3. 2D IR spectra of cyanide in water investigated by molecular dynamics simulations

    USGS Publications Warehouse

    Lee, Myung Won; Carr, Joshua K.; Göllner, Michael; Hamm, Peter; Meuwly, Markus

    2013-01-01

    Using classical molecular dynamics simulations, the 2D infrared (IR) spectroscopy of CN− solvated in D2O is investigated. Depending on the force field parametrizations, most of which are based on multipolar interactions for the CN− molecule, the frequency-frequency correlation function and observables computed from it differ. Most notably, models based on multipoles for CN− and TIP3P for water yield quantitatively correct results when compared with experiments. Furthermore, the recent finding that T 1 times are sensitive to the van der Waals ranges on the CN− is confirmed in the present study. For the linear IR spectrum, the best model reproduces the full widths at half maximum almost quantitatively (13.0 cm−1 vs. 14.9 cm−1) if the rotational contribution to the linewidth is included. Without the rotational contribution, the lines are too narrow by about a factor of two, which agrees with Raman and IR experiments. The computed and experimental tilt angles (or nodal slopes) α as a function of the 2D IR waiting time compare favorably with the measured ones and the frequency fluctuation correlation function is invariably found to contain three time scales: a sub-ps, 1 ps, and one on the 10-ps time scale. These time scales are discussed in terms of the structural dynamics of the surrounding solvent and it is found that the longest time scale (≈10 ps) most likely corresponds to solvent exchange between the first and second solvation shell, in agreement with interpretations from nuclear magnetic resonance measurements.

  4. 2D numerical simulation of passive autocatalytic recombiner for hydrogen mitigation

    NASA Astrophysics Data System (ADS)

    Gera, B.; Sharma, P. K.; Singh, R. K.

    2012-04-01

    Resolving hydrogen related safety issues, pertaining to nuclear reactor safety has been an important area of research world over for the past decade. The studies on hydrogen transport behavior and development of hydrogen mitigation systems are still being pursued actively in various research labs, including Bhabha Atomic Research Centre (BARC), in India. The passive autocatalytic recombiner (PAR) is one of such hydrogen mitigating device consisting of catalyst surfaces arranged in an open-ended enclosure. In the plate type recombiner design sheets made of stainless steel and coated with platinum catalyst material are arranged in parallel inside a flow channel. The catalyst elements are exposed to a constant flow of a mixture of air, hydrogen and steam, a catalytic reaction occurs spontaneously at the catalyst surfaces and the heat of reaction produces natural convection flow through the enclosure. Numerical simulation and experiments are required for an in-depth knowledge of such plate type PAR. Specific finite volume based in-house 2D computational fluid dynamics (CFD) code has been developed to model and analyse the working of these recombiners and has been used to simulate one literature quoted experiment. The validation results were in good agreement against literature quoted German REKO experiments. Parametric study has been performed for particular recombiner geometry for various inlet conditions. Salient features of the simplified CFD model developed at BARC and results of the present model calculations are presented in this paper.

  5. Observed and simulated power spectra of kinetic and magnetic energy retrieved with 2D inversions

    NASA Astrophysics Data System (ADS)

    Danilovic, S.; Rempel, M.; van Noort, M.; Cameron, R.

    2016-10-01

    Context. Information on the origin of internetwork magnetic field is hidden at the smallest spatial scales. Aims: We try to retrieve the power spectra with certainty to the highest spatial frequencies allowed by current instrumentation. Methods: To accomplish this, we use a 2D inversion code that is able to recover information up to the instrumental diffraction limit. Results: The retrieved power spectra have shallow slopes that extend further down to much smaller scales than has been found before. They do not seem to show any power law. The observed slopes at subgranular scales agree with those obtained from recent local dynamo simulations. Small differences are found for the vertical component of kinetic energy that suggest that observations suffer from an instrumental effect that is not taken into account. Conclusions: Local dynamo simulations quantitatively reproduce the observed magnetic energy power spectra on the scales of granulation down to the resolution limit of Hinode/SP, within the error bars inflicted by the method used and the instrumental effects replicated.

  6. Some features of auroral electric fields as seen in 2D numerical simulations

    NASA Technical Reports Server (NTRS)

    Thiemann, H.; Singh, N.; Schunk, R. W.

    1984-01-01

    Results of 2D plasma simulations are presented and related to auroral observations. The formation of V-shaped potentials is studied with a 2 1/2 dimensional electrostatic particle-in-cell code for a magnetized plasma. It is shown that amplitudes for perpendicular electric fields are larger than for parallel electric fields, and for Te less than 100 eV, the amplitudes are comparable to the electric fields associated with the electrostatic shocks observed from the S3-3 satellite. The excitation of electrostatic ion-cyclotron EIC waves which occurs in the region below the parallel potential drop is discussed. In auroral plasmas EIC waves are observed above the V-shaped double layers in association with ion beams and field-aligned currents. The results also show that oppositely directed electric fields in the center and at the edges of the simulation region produce oppositely directed currents. Precipitating auroral ions in association with electron inverted-V events are seen by the DMSP-F6 satellite.

  7. 2D simulation of transport and degradation in the River Rhine.

    PubMed

    Teichmann, L; Reuschenbach, P; Müller, B; Horn, H

    2002-01-01

    A simple 2D model has been developed for the simulation of mass transport and degradation of substances in the river Rhine. The model describes mass transport in the flow direction with a convective and a dispersive term. Transversal transport is described by segmenting the river and formulating a transversal exchange coefficient between the segments. Degradation can be formulated with any kinetics from first order to complex enzyme kinetics. The model was verified with monitoring data from the river Rhine. The hydrodynamic parameters such as dispersion coefficients and exchange coefficients were fitted to the conductivity, which was assumed to be non-degradable. The degradation term was fitted to ammonia values. The model was used to simulate measured concentrations of a readily (Aniline) and a poorly biodegradable substance (1,4-Dioxan) 10 m from the left river bank. It was the objective of this research program to develop a model which allows a realistic estimation of the locally and regionally predicted environmental concentration of chemical substances in the EU risk assessment scheme.

  8. Modelling Magnetised Protostellar Jets with SPH

    NASA Astrophysics Data System (ADS)

    Bate, Matthew R.; Price, Daniel J.; Tricco, Terrence S.

    We present results from the first smoothed particle hydrodynamics (SPH) simulations to produce stable long-lived magnetised protostellar jets. We briefly discuss the problems that have arisen in modelling magnetic fields within the SPH formalism in the past, and describe our new method for satisfying the magnetic divergence constraint. We then present results from calculations that follow the collapse of molecular cloud cores to the formation of the first hydrostatic core and follow the magnetised jets launched from the vicinity of the core to distances in excess of 2,000 AU.

  9. A Comparison of 2D to 3D Hydro Simulations of Asteroid Mitigation by a Strong Surface Explosion

    NASA Astrophysics Data System (ADS)

    Weaver, R.; Dearholdt, W.

    2011-12-01

    Disruption of a potentially hazardous object (PHO) by an energetic surface or subsurface burst is considered as one possible method of impact-hazard mitigation. This technique of employing surface or subsurface explosions has been popularized in the media but is probably one of the lower priority deflection/disruption methods, unless the warning time is short. In all of our current simulation we use realistic RADAR shape models for the initial geometry, not merely spherical objects. The non-sphericity of the geometry is very important in the resultant shock hydrodynamic evolution. This work is a follow-on to previous 2D simulations with the RAGE hydrocode to simulate the imparted momentum as a function of depth-of-burial (DOB) on a non-spherical "rubble pile" composition. Specifically, here, we have started a full 3D simulation of a 1 Mt surface explosion on a porous (~40% porosity) "rubble pile" model in the shape of asteroid 25143 Itokawa. This simulation has progressed far enough to start comparisons between the 2D and 3D runs of this model. There are significant changes in the 3D geometry that reduce the momentum imparted to the asteroid in these RAGE simulations. I will discuss this set of simulations, give some background results from previous 2D simulations and indicate the differences between 2D and 3D simulations.

  10. 2-D spectral element simulations of destructive ground shaking in Catania (Italy)

    NASA Astrophysics Data System (ADS)

    Priolo, Enrico

    This study wants to estimate the strong ground motion in the municipal area of Catania (Italy) for a catastrophic earthquake scenario. It is part of a larger research program funded by the National Research Council - National Group for the Defence Against Earthquakes (CNR-GNDT), The Catania Project, devoted to evaluating the seismic risk of a highly urbanised area, such as that of Catania, located in a seismically active region. The reference earthquake simulates the catastrophic event (M 7.2) of 1693. The ground shaking is computed solving the 2-D full-wave equation by the Chebyshev spectral element method (SPEM). Particular emphasis is given to the construction of realistic structural models, also including the finest local detail, obtained from the geophysical, geological and geotechnical data available. Simulations are performed for several sources, to account for both a change in source position and orientation, and the finite extension of the fault along its dip. Synthetic seismograms and peak ground acceleration (PGA) envelopes, calculated at the surface for four transects across the Catania area, constitute the main result of this study which can be used for practical purposes. Simulations show that ground motion is strongly influenced by both source characteristics and crustal structure. We have found that PGA values range between 0.1 g and 0.5 g, although particular site conditions strongly affect these values locally. For example, the frequencies of maximum interest in civil engineering (1.5-4 Hz) are enhanced selectively by a thick portion of surface sediments (i.e., 30-100 m for an average shear wave velocity of 500-600 m/s). An unexpected feature is the appreciable increase of PGA at large epicentral distances, which contradicts classical attenuation relations. All the results are examined through an analysis of the propagating wavefield.

  11. Using high resolution bathymetric lidar data for a Telemac2D simulation

    NASA Astrophysics Data System (ADS)

    Dobler, Wolfgang; Baran, Ramona; Steinbacher, Frank; Ritter, Marcel; Aufleger, Markus

    2014-05-01

    Knowledge about the hydraulic situation in a mountain torrent is relevant to quantify flood risks, to study sediment transport and to assess the waterbodies' ecology. To conduct reliable calculations, high-quality terrain data of riverbeds, riverbanks and floodplains are required. Typically, digital terrain models (DTMs) of floodplains are derived from classical airborne laserscanning (red wavelength) together with terrestrial surveys along riverbeds and riverbanks. Usually, these are restricted to a limited number of cross sections. Terrestrial surveys are required since laser measurement systems cannot penetrate the water column of the observed waterbodies. Consequently, data describing the geometry of riverbeds and bank structures are hardly available at high spatial resolutions and extents, comparable to the airborne-laser scanning derived data for river floodplains. In this study, a newly available, water-penetrating airborne laser system (green wavelength, FFG research project between the University of Innsbruck and Riegl LMS) was used to survey a mountain torrent. Detailed and extensive data (~30 points/m² on topo-bathy side) of the riverbed and the riverbanks were acquired with this single sensor. In order to construct a 2D-Telemac simulation, the point cloud was down-sampled to an appropriate resolution required for the simulation. The creation of the mesh was carried out with the Software HydroVish and imported into Blue Kenue for further boundary treatment. On one hand the calibration of the numerical model was based on a known water discharge-rate and on the other on abundant data points of the water surface. The green laser system demonstrates its great potential for such an analysis. The final results of the numerical simulation show clearly the supremacy of using such a high resolution data basis in contrast to the traditional way of terrestrial surveying of cross sections along riverbeds.

  12. Simulation of bootstrap current in 2D and 3D ideal magnetic fields in tokamaks

    NASA Astrophysics Data System (ADS)

    Raghunathan, M.; Graves, J. P.; Cooper, W. A.; Pedro, M.; Sauter, O.

    2016-09-01

    We aim to simulate the bootstrap current for a MAST-like spherical tokamak using two approaches for magnetic equilibria including externally caused 3D effects such as resonant magnetic perturbations (RMPs), the effect of toroidal ripple, and intrinsic 3D effects such as non-resonant internal kink modes. The first approach relies on known neoclassical coefficients in ideal MHD equilibria, using the Sauter (Sauter et al 1999 Phys. Plasmas 6 2834) expression valid for all collisionalities in axisymmetry, and the second approach being the quasi-analytic Shaing–Callen (Shaing and Callen 1983 Phys. Fluids 26 3315) model in the collisionless regime for 3D. Using the ideal free-boundary magnetohydrodynamic code VMEC, we compute the flux-surface averaged bootstrap current density, with the Sauter and Shaing–Callen expressions for 2D and 3D ideal MHD equilibria including an edge pressure barrier with the application of resonant magnetic perturbations, and equilibria possessing a saturated non-resonant 1/1 internal kink mode with a weak internal pressure barrier. We compare the applicability of the self-consistent iterative model on the 3D applications and discuss the limitations and advantages of each bootstrap current model for each type of equilibrium.

  13. Simulation of bootstrap current in 2D and 3D ideal magnetic fields in tokamaks

    NASA Astrophysics Data System (ADS)

    Raghunathan, M.; Graves, J. P.; Cooper, W. A.; Pedro, M.; Sauter, O.

    2016-09-01

    We aim to simulate the bootstrap current for a MAST-like spherical tokamak using two approaches for magnetic equilibria including externally caused 3D effects such as resonant magnetic perturbations (RMPs), the effect of toroidal ripple, and intrinsic 3D effects such as non-resonant internal kink modes. The first approach relies on known neoclassical coefficients in ideal MHD equilibria, using the Sauter (Sauter et al 1999 Phys. Plasmas 6 2834) expression valid for all collisionalities in axisymmetry, and the second approach being the quasi-analytic Shaing-Callen (Shaing and Callen 1983 Phys. Fluids 26 3315) model in the collisionless regime for 3D. Using the ideal free-boundary magnetohydrodynamic code VMEC, we compute the flux-surface averaged bootstrap current density, with the Sauter and Shaing-Callen expressions for 2D and 3D ideal MHD equilibria including an edge pressure barrier with the application of resonant magnetic perturbations, and equilibria possessing a saturated non-resonant 1/1 internal kink mode with a weak internal pressure barrier. We compare the applicability of the self-consistent iterative model on the 3D applications and discuss the limitations and advantages of each bootstrap current model for each type of equilibrium.

  14. Towards Simulating the Transverse Ising Model in a 2D Array of Trapped Ions

    NASA Astrophysics Data System (ADS)

    Sawyer, Brian

    2013-05-01

    Two-dimensional Coulomb crystals provide a useful platform for large-scale quantum simulation. Penning traps enable confinement of large numbers of ions (>100) and allow for the tunable-range spin-spin interactions demonstrated in linear ion strings, facilitating simulation of quantum magnetism at a scale that is currently intractable on classical computers. We readily confine hundreds of Doppler laser-cooled 9Be+ within a Penning trap, producing a planar array of ions with self-assembled triangular order. The transverse ``drumhead'' modes of our 2D crystal along with the valence electron spin of Be+ serve as a resource for generating spin-motion and spin-spin entanglement. Applying a spin-dependent optical dipole force (ODF) to the ion array, we perform spectroscopy and thermometry of individual drumhead modes. This ODF also allows us to engineer long-range Ising spin couplings of either ferromagnetic or anti-ferromagnetic character whose approximate power-law scaling with inter-ion distance, d, may be varied continuously from 1 /d0 to 1 /d3. An effective transverse magnetic field is applied via microwave radiation at the ~124-GHz spin-flip frequency, and ground states of the effective Ising Hamiltonian may in principle be prepared adiabatically by slowly decreasing this transverse field in the presence of the induced Ising coupling. Long-range anti-ferromagnetic interactions are of particular interest due to their inherent spin frustration and resulting large, near-degenerate manifold of ground states. We acknowledge support from NIST and the DARPA-OLE program.

  15. Icarus: A 2-D Direct Simulation Monte Carlo (DSMC) Code for Multi-Processor Computers

    SciTech Connect

    BARTEL, TIMOTHY J.; PLIMPTON, STEVEN J.; GALLIS, MICHAIL A.

    2001-10-01

    Icarus is a 2D Direct Simulation Monte Carlo (DSMC) code which has been optimized for the parallel computing environment. The code is based on the DSMC method of Bird[11.1] and models from free-molecular to continuum flowfields in either cartesian (x, y) or axisymmetric (z, r) coordinates. Computational particles, representing a given number of molecules or atoms, are tracked as they have collisions with other particles or surfaces. Multiple species, internal energy modes (rotation and vibration), chemistry, and ion transport are modeled. A new trace species methodology for collisions and chemistry is used to obtain statistics for small species concentrations. Gas phase chemistry is modeled using steric factors derived from Arrhenius reaction rates or in a manner similar to continuum modeling. Surface chemistry is modeled with surface reaction probabilities; an optional site density, energy dependent, coverage model is included. Electrons are modeled by either a local charge neutrality assumption or as discrete simulational particles. Ion chemistry is modeled with electron impact chemistry rates and charge exchange reactions. Coulomb collision cross-sections are used instead of Variable Hard Sphere values for ion-ion interactions. The electro-static fields can either be: externally input, a Langmuir-Tonks model or from a Green's Function (Boundary Element) based Poison Solver. Icarus has been used for subsonic to hypersonic, chemically reacting, and plasma flows. The Icarus software package includes the grid generation, parallel processor decomposition, post-processing, and restart software. The commercial graphics package, Tecplot, is used for graphics display. All of the software packages are written in standard Fortran.

  16. Debris Flow Hazard Map Simulation using FLO-2D For Selected Areas in the Philippines

    NASA Astrophysics Data System (ADS)

    Khallil Ferrer, Peter; Llanes, Francesca; dela Resma, Marvee; Realino, Victoriano, II; Obrique, Julius; Ortiz, Iris Jill; Aquino, Dakila; Narod Eco, Rodrigo; Mahar Francisco Lagmay, Alfredo

    2014-05-01

    On December 4, 2012, Super Typhoon Bopha wreaked havoc in the southern region of Mindanao, leaving 1,067 people dead and causing USD 800 million worth of damage. Classified as a Category 5 typhoon by the Joint Typhoon Warning Center (JTWC), Bopha brought intense rainfall and strong winds that triggered landslides and debris flows, particularly in Barangay (village) Andap, New Bataan municipality, in the southern Philippine province of Compostela Valley. The debris flow destroyed school buildings and covered courts and an evacuation center. Compostela Valley also suffered the most casualties of any province: 612 out of a total of 1,067. In light of the disaster in Compostela, measures were immediately devised to improve available geohazard maps to raise public awareness about landslides and debris flows. A debris flow is a very rapid to extremely rapid flow of saturated non-plastic debris in a steep channel. They are generated when heavy rainfall saturates sediments, causing them to flow down river channels within an alluvial fan situated at the base of the slope of a mountain drainage network. Many rural communities in the Philippines, such as Barangay Andap, are situated at the apex of alluvial fans and in the path of potential debris flows. In this study, we conducted simulations of debris flows to assess the risks in inhabited areas throughout the Philippines and validated the results in the field, focusing on the provinces of Pangasinan and Aurora as primary examples. Watersheds that drain in an alluvial fan using a 10-m resolution Synthetic Aperture Radar (SAR)-derived Digital Elevation Model (DEM) was first delineated, and then a 1 in 100-year rain return rainfall scenario for the watershed was used to simulate debris flows using FLO-2D, a flood-routing software. The resulting simulations were used to generate debris flow hazard maps which are consistent with danger zones in alluvial fans delineated previously from satellite imagery and available DEMs. The

  17. Simulated KWAJEX Convective Systems Using a 2D and 3D Cloud Resolving Model and Their Comparisons with Radar Observations

    NASA Technical Reports Server (NTRS)

    Shie, Chung-Lin; Tao, Wei-Kuo; Simpson, Joanne

    2003-01-01

    The 1999 Kwajalein Atoll field experiment (KWAJEX), one of several major TRMM (Tropical Rainfall Measuring Mission) field experiments, has successfully obtained a wealth of information and observation data on tropical convective systems over the western Central Pacific region. In this paper, clouds and convective systems that developed during three active periods (Aug 7-12, Aug 17-21, and Aug 29-Sep 13) around Kwajalein Atoll site are simulated using both 2D and 3D Goddard Cumulus Ensemble (GCE) models. Based on numerical results, the clouds and cloud systems are generally unorganized and short lived. These features are validated by radar observations that support the model results. Both the 2D and 3D simulated rainfall amounts and their stratiform contribution as well as the heat, water vapor, and moist static energy budgets are examined for the three convective episodes. Rainfall amounts are quantitatively similar between the two simulations, but the stratiform contribution is considerably larger in the 2D simulation. Regardless of dimension, fo all three cases, the large-scale forcing and net condensation are the two major physical processes that account for the evolution of the budgets with surface latent heat flux and net radiation solar and long-wave radiation)being secondary processes. Quantitative budget differences between 2D and 3D as well as between various episodes will be detailed.Morover, simulated radar signatures and Q1/Q2 fields from the three simulations are compared to each other and with radar and sounding observations.

  18. Multi-phase SPH modelling of violent hydrodynamics on GPUs

    NASA Astrophysics Data System (ADS)

    Mokos, Athanasios; Rogers, Benedict D.; Stansby, Peter K.; Domínguez, José M.

    2015-11-01

    This paper presents the acceleration of multi-phase smoothed particle hydrodynamics (SPH) using a graphics processing unit (GPU) enabling large numbers of particles (10-20 million) to be simulated on just a single GPU card. With novel hardware architectures such as a GPU, the optimum approach to implement a multi-phase scheme presents some new challenges. Many more particles must be included in the calculation and there are very different speeds of sound in each phase with the largest speed of sound determining the time step. This requires efficient computation. To take full advantage of the hardware acceleration provided by a single GPU for a multi-phase simulation, four different algorithms are investigated: conditional statements, binary operators, separate particle lists and an intermediate global function. Runtime results show that the optimum approach needs to employ separate cell and neighbour lists for each phase. The profiler shows that this approach leads to a reduction in both memory transactions and arithmetic operations giving significant runtime gains. The four different algorithms are compared to the efficiency of the optimised single-phase GPU code, DualSPHysics, for 2-D and 3-D simulations which indicate that the multi-phase functionality has a significant computational overhead. A comparison with an optimised CPU code shows a speed up of an order of magnitude over an OpenMP simulation with 8 threads and two orders of magnitude over a single thread simulation. A demonstration of the multi-phase SPH GPU code is provided by a 3-D dam break case impacting an obstacle. This shows better agreement with experimental results than an equivalent single-phase code. The multi-phase GPU code enables a convergence study to be undertaken on a single GPU with a large number of particles that otherwise would have required large high performance computing resources.

  19. A Molecular Dynamics simulation of Hugoniot curves of HMX using ReaxFF and its application in SPH modeling of macroscale terminal effects

    NASA Astrophysics Data System (ADS)

    Liu, Gui-Rong; Wang, Gangyu; Peng, Qing; de, Suvranu

    2015-06-01

    HMX is a widely used high explosive. Hugoniot curve is a valuable tool for analyzing the equations of state, and is of importance for all energetic materials including HMX. The Hugoniot curves serve as one of the key character in continuum modeling of high explosives. It can be obtained from experimental measurements, and recently also from computational studies. In this study, the Hugoniot curve of HMX is calculated using a multi-scale shock technique via Molecular Dynamics (MD) simulations, where the reactive force field ReaxFF is obtained from Quantum Mechanics calculations and tailored for HMX. It is found that our MD Hugoniot curve of HMX from the optimized ReaxFF potential agree well with experiments. The MD Hugoniot curve of HMX is also incorporated in our in-house Smoothed Particle Hydrodynamics (SPH) code for the modeling of the macro-scale explosive behaviors of HMX explosives and HMX cased in a 3D cylinder. The authors would like to acknowledge the generous financial support from the Defense Threat Reduction Agency (DTRA) Grant HDTRA1-13-1-0025.

  20. 3D Radiative Transfer in Eta Carinae: The SimpleX Radiative Transfer Algorithm Applied to 3D SPH Simulations of Eta Car's Colliding Winds

    NASA Astrophysics Data System (ADS)

    Clementel, N.; Madura, T. I.; Kruip, C. J. H.; Icke, V.; Gull, T. R.

    2014-04-01

    At the heart of the spectacular bipolar Homunculus nebula lies an extremely luminous (5*10^6 L_sun) colliding wind binary with a highly eccentric (e ~ 0.9), 5.54-year orbit and a total mass ~ 110 M_sun. Our closest (D ~ 2.3 kpc) and best example of a pre-hypernova environment, Eta Carinae is an ideal astrophysical laboratory for studying massive binary interactions, stellar wind-wind collisions, and massive star evolution. In order to improve our knowledge of the system, we need to generate synthetic observations and compare them with the already available and future HST/STIS data. We present initial results from full 3D radiative transfer post-processing of 3D SPH hydrodynamical simulations of the interacting winds of Eta Carinae. We use SimpleX algorithm to obtain the ionization fractions of hydrogen and helium, this results in ionization maps of both species that constrain the regions where these lines can form. These results will allow us to put constraints on the number of ionizing photons coming from the companion. This construction of synthetic observations allows us to obtain insight into the highly complex 3D flows in Eta, from the shape of the ionized volume and its resulting optical/spectral appearance.

  1. Numerical Simulation of Supersonic Compression Corners and Hypersonic Inlet Flows Using the RPLUS2D Code

    NASA Technical Reports Server (NTRS)

    Kapoor, Kamlesh; Anderson, Bernhard H.; Shaw, Robert J.

    1994-01-01

    A two-dimensional computational code, PRLUS2D, which was developed for the reactive propulsive flows of ramjets and scramjets, was validated for two-dimensional shock-wave/turbulent-boundary-layer interactions. The problem of compression corners at supersonic speeds was solved using the RPLUS2D code. To validate the RPLUS2D code for hypersonic speeds, it was applied to a realistic hypersonic inlet geometry. Both the Baldwin-Lomax and the Chien two-equation turbulence models were used. Computational results showed that the RPLUS2D code compared very well with experimentally obtained data for supersonic compression corner flows, except in the case of large separated flows resulting from the interactions between the shock wave and turbulent boundary layer. The computational results compared well with the experiment results in a hypersonic NASA P8 inlet case, with the Chien two-equation turbulence model performing better than the Baldwin-Lomax model.

  2. Stability and accuracy of 3D neutron transport simulations using the 2D/1D method in MPACT

    DOE PAGESBeta

    Collins, Benjamin; Stimpson, Shane; Kelley, Blake W.; Young, Mitchell T. H.; Kochunas, Brendan; Graham, Aaron; Larsen, Edward W.; Downar, Thomas; Godfrey, Andrew

    2016-08-25

    We derived a consistent “2D/1D” neutron transport method from the 3D Boltzmann transport equation, to calculate fuel-pin-resolved neutron fluxes for realistic full-core Pressurized Water Reactor (PWR) problems. The 2D/1D method employs the Method of Characteristics to discretize the radial variables and a lower order transport solution to discretize the axial variable. Our paper describes the theory of the 2D/1D method and its implementation in the MPACT code, which has become the whole-core deterministic neutron transport solver for the Consortium for Advanced Simulations of Light Water Reactors (CASL) core simulator VERA-CS. We also performed several applications on both leadership-class and industry-classmore » computing clusters. Results are presented for whole-core solutions of the Watts Bar Nuclear Power Station Unit 1 and compared to both continuous-energy Monte Carlo results and plant data.« less

  3. 2-D Numerical Simulation of Eruption Clouds : Effects of Turbulent Mixing between Eruption Cloud and Air

    NASA Astrophysics Data System (ADS)

    Suzuki, Y.; KOYAGUCHI, T.; OGAWA, M.; Hachisu, I.

    2001-05-01

    Mixing of eruption cloud and air is one of the most important processes for eruption cloud dynamics. The critical condition of eruption types (eruption column or pyroclastic flow) depends on efficiency of mixing of eruption cloud and the ambient air. However, in most of the previous models (e.g., Sparks,1986; Woods, 1988), the rate of mixing between cloud and air is taken into account by introducing empirical parameters such as entrainment coefficient or turbulent diffusion coefficient. We developed a numerical model of 2-D (axisymmetrical) eruption columns in order to simulate the turbulent mixing between eruption column and air. We calculated the motion of an eruption column from a circular vent on the flat surface of the earth. Supposing that relative velocity of gas and ash particles is sufficiently small, we can treat eruption cloud as a single gas. Equation of state (EOS) for the mixture of the magmatic component (i.e. volcanic gas plus pyroclasts) and air can be expressed by EOS for an ideal gas, because volume fraction of the gas phase is very large. The density change as a function of mixing ratio between air and the magmatic component has a strong non-linear feature, because the density of the mixture drastically decreases as entrained air expands by heating. This non-linear feature can be reproduced by changing the gas constant and the ratio of specific heat in EOS for ideal gases; the molecular weight increases and the ratio of specific heat approaches 1 as the magmatic component increases. It is assumed that the dynamics of eruption column follows the Euler equation, so that no viscous effect except for the numerical viscosity is taken into account. Roe scheme (a general TVD scheme for compressible flow) is used in order to simulate the generation of shock waves inside and around the eruption column. The results show that many vortexes are generated around the boundary between eruption cloud and air, which results in violent mixing. When the size of

  4. FLAC/SPECFEM2D coupled numerical simulation of wavefields near excavation boundaries in underground mines

    NASA Astrophysics Data System (ADS)

    Wang, X.; Cai, M.

    2016-11-01

    A nonlinear velocity model that considers the influence of confinement and rock mass failure on wave velocity is developed. A numerical method, which couples FLAC and SPECFEM2D, is developed for ground motion modeling near excavation boundaries in underground mines. The motivation of developing the FLAC/SPECFEM2D coupled approach is to take merits of each code, such as the stress analysis capability in FLAC and the powerful wave propagation analysis capability in SPECFEM2D. Because stress redistribution and failure of the rock mass around an excavation are considered, realistic non-uniform velocity fields for the SPECFEM2D model can be obtained, and this is a notable feature of this study. Very large differences in wavefields and ground motion are observed between the results from the non-uniform and the uniform velocity models. If the non-uniform velocity model is used, the ground motion around a stope can be amplified up to five times larger than that given by the design scaling law. If a uniform velocity model is used, the amplification factor is only about three. Using the FLAC/SPECFEM2D coupled modeling approach, accurate velocity models can be constructed and this in turn will assist in predicting ground motions accurately around underground excavations.

  5. 2-D and 3-D numerical simulation of a supersonic inlet flowfield

    NASA Astrophysics Data System (ADS)

    Enomoto, Shunji; Arakawa, Chuichi

    The 2-D and 3-D steady, Reynolds-averaged Navier-Stokes equations were numerically solved for the flowfields in an experimentally tested inlet model with bleed through a cavity. In the 2-D analysis, a normal shock was located at diffuser inlet instead of the position below the cavity. The normal shock in the middle of the diffuser caused a massive separation of the boundary layer and a large total pressure loss. In the 3-D analysis, the shock wave was distorted by the side wall boundary layer separation, and the complex flow structure was established. The result of the 3-D analysis agreed well with the experiment.

  6. Technical Note: Description of Surface Tension as Implemented In LDEC-SPH Module

    SciTech Connect

    Morris, J P

    2009-02-26

    This brief report describes recent results obtained with the LDEC SPH module including the effects of surface tension. LDEC implements a quasi-incompressible approximation to the Navier-Stokes equations (Morris et al., 1997). The author previously developed an approach to surface tension with SPH that calculated the curvature directly by taking the divergence of surface normals obtained from the gradient of a color function (Morris, 2000). In contrast, the implementation demonstrated here is based upon that developed by Tartakovsky and Meakin (2005) who introduced an additional force between the particles which results in the effect of surface tension. A similar method was also employed by Becker and Teschner (2007) who replaced the cosine based functional form developed by Tartakovsky and Meakin (2005) with a form based upon the SPH kernel function itself. These formulations do not accommodate a specified surface tension value, rather the effect of surface tension is an emergent feature and thus the techniques must be calibrated. Figure 1 shows results of an initial simulation performed with the LDEC-SPH module in 2-D using the approach developed by Tartakovsky and Meakin (2005). A square volume of fluid is observed to transition to a circle due to the effects of surface tension. Due to being critically damped, this simulation proceeds directly to the circular stable state. Future work will include following the same validation steps that Tartakovsky and Meakin (2005) used. That is, performing numerical experiments to determine the relationship between the parameter of the surface tension formulation and an equivalent effective surface tension value. We will also evaluate the alternative functional form promoted by Becker and Teschner (2007) to see if it provides improved robustness as claimed by those authors.

  7. Numerical modeling of surf zone dynamics under weakly plunging breakers with SPH method

    NASA Astrophysics Data System (ADS)

    Makris, Christos V.; Memos, Constantine D.; Krestenitis, Yannis N.

    2016-02-01

    The wave breaking of weak plungers over a relatively mild slope is investigated in this paper. Numerical modeling aspects are studied, concerning the propagation and breaking of shore-normal, nonlinear and regular waves. The two-dimensional (2-D) kinematics and dynamics (fluctuating flow features and large 2-D eddies) of the wave-induced flow on a vertical cross-section over the entire surf zone are simulated with the use of Smoothed Particle Hydrodynamics (SPH). The academic 'open source' code SPHysics v.2 is employed and the viscosity treatment is based on a Sub-Particle Scale (SPS) approach, similarly to the Large Eddy Simulations (LES) concept. Thorough analysis of the turbulent flow scales determines the necessary refinement of the spatial resolution. The initial particle discretization reaches down to the demarcation point between integral turbulence length scales and Taylor micro-scales. A convolution-type integration method is implemented for the transformation of scattered Lagrangian particle data to Eulerian values at fixed gauges. A heuristic technique of ensemble-averaging is used for the discrimination of the fluctuating flow components from coherent structures and ordered wave motion. Comparisons between numerical and experimental data give encouraging results for several wave features. The wave-induced mean flows are simulated plausibly, and even the 'streaming' effect near the bed is reproduced. The recurring vorticity patterns are derived, and coherent 2-D structures inside the surf zone are identified. Fourier spectral analysis of velocities reveals isotropy of 2-D fluctuating dynamics up to rather high frequencies in shear intensified regions. The simulated Reynolds stresses follow patterns that define the characteristic mechanism of wave breaking for weak plungers. Persisting discrepancies at the incipient breaking region confirm the need for fine, massively 'parallel' 3-D SPS-SPH simulations.

  8. Comparison of 2-D model simulations of ozone and nitrous oxide at high latitudes with stratospheric measurements

    NASA Technical Reports Server (NTRS)

    Proffitt, M. H.; Solomon, S.; Loewenstein, M.

    1992-01-01

    A linear reference relationship between O3 and N2O has been used to estimate polar winter O3 loss from aircraft data taken in the lower stratosphere. Here, this relationship is evaluated at high latitudes by comparing it with a 2D model simulation and with NIMBUS 7 satellite measurements. Although comparisons with satellite measurements are limited to January through May, the model simulations are compared during other seasons. The model simulations and the satellite data are found to be consistent with the winter O3 loss analysis. It is shown that such analyses are likely to be inappropriate during other seasons.

  9. Justification for a 2D versus 3D fingertip finite element model during static contact simulations.

    PubMed

    Harih, Gregor; Tada, Mitsunori; Dolšak, Bojan

    2016-10-01

    The biomechanical response of a human hand during contact with various products has not been investigated in details yet. It has been shown that excessive contact pressure on the soft tissue can result in discomfort, pain and also cumulative traumatic disorders. This manuscript explores the benefits and limitations of a simplified two-dimensional vs. an anatomically correct three-dimensional finite element model of a human fingertip. Most authors still use 2D FE fingertip models due to their simplicity and reduced computational costs. However we show that an anatomically correct 3D FE fingertip model can provide additional insight into the biomechanical behaviour. The use of 2D fingertip FE models is justified when observing peak contact pressure values as well as displacement during the contact for the given studied cross-section. On the other hand, an anatomically correct 3D FE fingertip model provides a contact pressure distribution, which reflects the fingertip's anatomy.

  10. A sharp interface method for SPH

    NASA Astrophysics Data System (ADS)

    Zhang, Mingyu; Deng, Xiao-Long

    2015-12-01

    A sharp interface method (SIM) for smoothed particle hydrodynamics (SPH) has been developed to simulate two-phase flows with clear interfaces. The level set function is introduced to capture the interface implicitly. The interface velocity is used to evolve the level set function. The smoothness of the level set function helps to improve the accuracy of the interface curvature. Material discontinuity across the interface is dealt with by the ghost fluid method. The interface states are calculated by applying the jump conditions and are extended to the corresponding ghost fluid particles. The ghost fluid method helps to get smooth and stable calculation near the interface. The performance of the developed method is validated by benchmark tests. The developed SIM for SPH can be applied to simulate low speed two-phase flows of high density ratios with clear interface accurately and stably.

  11. Simulation of multi-steps thermal transition in 2D spin-crossover nanoparticles

    NASA Astrophysics Data System (ADS)

    Jureschi, Catalin-Maricel; Pottier, Benjamin-Louis; Linares, Jorge; Richard Dahoo, Pierre; Alayli, Yasser; Rotaru, Aurelian

    2016-04-01

    We have used an Ising like model to study the thermal behavior of a 2D spin crossover (SCO) system embedded in a matrix. The interaction parameter between edge SCO molecules and its local environment was included in the standard Ising like model as an additional term. The influence of the system's size and the ratio between the number of edge molecules and the other molecules were also discussed.

  12. EDGE2D Simulations of JET{sup 13}C Migration Experiments

    SciTech Connect

    J.D. Strachan; J.P. Coad; G. Corrigan; G.F. Matthews; J. Spence

    2004-06-16

    Material migration has received renewed interest due to tritium retention associated with carbon transport to remote vessel locations. Those results influence the desirability of carbon usage on ITER. Subsequently, additional experiments have been performed, including tracer experiments attempting to identify material migration from specific locations. In this paper, EDGE2D models a well-diagnosed JET{sup 13}C tracer migration experiment. The role of SOL flows upon the migration patterns is identified.

  13. Development and validation of a modelling framework for simulating 2D-mammography and breast tomosynthesis images

    NASA Astrophysics Data System (ADS)

    Elangovan, Premkumar; Warren, Lucy M.; Mackenzie, Alistair; Rashidnasab, Alaleh; Diaz, Oliver; Dance, David R.; Young, Kenneth C.; Bosmans, Hilde; Strudley, Celia J.; Wells, Kevin

    2014-08-01

    Planar 2D x-ray mammography is generally accepted as the preferred screening technique used for breast cancer detection. Recently, digital breast tomosynthesis (DBT) has been introduced to overcome some of the inherent limitations of conventional planar imaging, and future technological enhancements are expected to result in the introduction of further innovative modalities. However, it is crucial to understand the impact of any new imaging technology or methodology on cancer detection rates and patient recall. Any such assessment conventionally requires large scale clinical trials demanding significant investment in time and resources. The concept of virtual clinical trials and virtual performance assessment may offer a viable alternative to this approach. However, virtual approaches require a collection of specialized modelling tools which can be used to emulate the image acquisition process and simulate images of a quality indistinguishable from their real clinical counterparts. In this paper, we present two image simulation chains constructed using modelling tools that can be used for the evaluation of 2D-mammography and DBT systems. We validate both approaches by comparing simulated images with real images acquired using the system being simulated. A comparison of the contrast-to-noise ratios and image blurring for real and simulated images of test objects shows good agreement ( < 9% error). This suggests that our simulation approach is a promising alternative to conventional physical performance assessment followed by large scale clinical trials.

  14. Development and validation of a modelling framework for simulating 2D-mammography and breast tomosynthesis images.

    PubMed

    Elangovan, Premkumar; Warren, Lucy M; Mackenzie, Alistair; Rashidnasab, Alaleh; Diaz, Oliver; Dance, David R; Young, Kenneth C; Bosmans, Hilde; Strudley, Celia J; Wells, Kevin

    2014-08-01

    Planar 2D x-ray mammography is generally accepted as the preferred screening technique used for breast cancer detection. Recently, digital breast tomosynthesis (DBT) has been introduced to overcome some of the inherent limitations of conventional planar imaging, and future technological enhancements are expected to result in the introduction of further innovative modalities. However, it is crucial to understand the impact of any new imaging technology or methodology on cancer detection rates and patient recall. Any such assessment conventionally requires large scale clinical trials demanding significant investment in time and resources. The concept of virtual clinical trials and virtual performance assessment may offer a viable alternative to this approach. However, virtual approaches require a collection of specialized modelling tools which can be used to emulate the image acquisition process and simulate images of a quality indistinguishable from their real clinical counterparts. In this paper, we present two image simulation chains constructed using modelling tools that can be used for the evaluation of 2D-mammography and DBT systems. We validate both approaches by comparing simulated images with real images acquired using the system being simulated. A comparison of the contrast-to-noise ratios and image blurring for real and simulated images of test objects shows good agreement ( < 9% error). This suggests that our simulation approach is a promising alternative to conventional physical performance assessment followed by large scale clinical trials.

  15. Towards numerical consistency and conservation for SPH approximations

    NASA Astrophysics Data System (ADS)

    Adams, Nikolaus; Hu, Xiangyu; Litvinov, Sergej

    2014-11-01

    Typical conservative Smoothed particle hydrodynamics (SPH) approximations introduce two errors: smoothing error is due to smoothing of the gradient by an integration associated with a kernel function; integration error due to approximating of the integration by summation over all particles within the kernel support. The integration error leads to violation of zero-order consistency, i.e., the inability to reproduce a constant field. We show that partition of unity is the condition under which the conservative SPH approximation achieves both consistency and convergence. The condition can be met by relaxing a particle distribution under a constant pressure field and invariant particle volume. The resulting particle distribution is very similar to those observed for liquid molecules. We further show that with two different typical kernel functions the SPH approximation satisfying the partition of unity property is able to achieve very high-order of the integration error for random particle locations. The background pressure used in a weakly compressible SPH simulation implies a self-relaxation mechanism, which explains that convergence with respect to increasing particle numbers could be obtained in SPH simulations, although not predicted by previous numerical analysis. Furthermore, by relating the integration error to the background pressure, we explain why the previously proposed transport-velocity formulation of SPH is able to achieve unprecedented accuracy and stability.

  16. Multi-layered coarse grid modelling in 2D urban flood simulations

    NASA Astrophysics Data System (ADS)

    Chen, Albert S.; Evans, Barry; Djordjević, Slobodan; Savić, Dragan A.

    2012-11-01

    SummaryRegular grids are commonly used in 2D flood modelling due to wide availability of terrain models and low pre-processing required for input preparation. Despite advances in both computing software and hardware, high resolution flood modelling remains computationally demanding when applied to a large study area when the available time and resources are limited. Traditional grid coarsening approach may reduce not only the computing demands, but also the accuracy of results due to the loss of detailed information. To keep key features that affect flow propagation within coarse grid, the approach proposed and tested in this paper adopts multiple layers in flood modelling to reflect individual flow paths separated by buildings within a coarse grid cell. The cell in each layer has its own parameters (elevation, roughness, building coverage ratio, and conveyance reduction factors) to describe itself and the conditions at boundaries with neighbourhood cells. Results of tests on the synthetic case study and the real world urban area show that the proposed multi-layered approach greatly improves the accuracy of coarse grid modelling with an insignificant additional computing cost. The proposed approach has been tested in conjunction with the UIM model by taking the high resolution results as the benchmark. The implementation of the proposed multi-layered methodology to any regular grid based 2D model would be straightforward.

  17. Enhanced job control language procedures for the SIMSYS2D two-dimensional water-quality simulation system

    USGS Publications Warehouse

    Karavitis, G.A.

    1984-01-01

    The SIMSYS2D two-dimensional water-quality simulation system is a large-scale digital modeling software system used to simulate flow and transport of solutes in freshwater and estuarine environments. Due to the size, processing requirements, and complexity of the system, there is a need to easily move the system and its associated files between computer sites when required. A series of job control language (JCL) procedures was written to allow transferability between IBM and IBM-compatible computers. (USGS)

  18. SEM simulation for 2D and 3D inspection metrology and defect review

    NASA Astrophysics Data System (ADS)

    Levi, Shimon; Schwartsband, Ishai; Khristo, Sergey; Ivanchenko, Yan; Adan, Ofer

    2014-03-01

    Advanced SEM simulation has become a key element in the ability of SEM inspection, metrology and defect review to meet the challenges of advanced technologies. It grants additional capabilities to the end user, such as 3D height measurements, accurate virtual metrology, and supports Design Based Metrology to bridge the gap between design layout and SEM image. In this paper we present SEM simulations capabilities, which take into consideration all parts of the SEM physical and electronic path, interaction between Electron beam and material, multi perspective SEM imaging and shadowing derived from proximity effects caused by the interaction of the Secondary Electrons signal with neighboring pattern edges. Optimizing trade-off between simulation accuracy, calibration procedures and computational complexity, the simulation is running in real-time with minimum impact on throughput. Experiment results demonstrate Height measurement capacities, and CAD based simulated pattern is compared with SEM image to evaluate simulated pattern fidelity.

  19. Simulation of Ultra-Small MOSFETs Using a 2-D Quantum-Corrected Drift-Diffusion Model

    NASA Technical Reports Server (NTRS)

    Biegal, Bryan A.; Rafferty, Connor S.; Yu, Zhiping; Ancona, Mario G.; Dutton, Robert W.; Saini, Subhash (Technical Monitor)

    1998-01-01

    The continued down-scaling of electronic devices, in particular the commercially dominant MOSFET, will force a fundamental change in the process of new electronics technology development in the next five to ten years. The cost of developing new technology generations is soaring along with the price of new fabrication facilities, even as competitive pressure intensifies to bring this new technology to market faster than ever before. To reduce cost and time to market, device simulation must become a more fundamental, indeed dominant, part of the technology development cycle. In order to produce these benefits, simulation accuracy must improve markedly. At the same time, device physics will become more complex, with the rapid increase in various small-geometry and quantum effects. This work describes both an approach to device simulator development and a physical model which advance the effort to meet the tremendous electronic device simulation challenge described above. The device simulation approach is to specify the physical model at a high level to a general-purpose (but highly efficient) partial differential equation solver (in this case PROPHET, developed by Lucent Technologies), which then simulates the model in 1-D, 2-D, or 3-D for a specified device and test regime. This approach allows for the rapid investigation of a wide range of device models and effects, which is certainly essential for device simulation to catch up with, and then stay ahead of, electronic device technology of the present and future. The physical device model used in this work is the density-gradient (DG) quantum correction to the drift-diffusion model [Ancona, Phys. Rev. B 35(5), 7959 (1987)]. This model adds tunneling and quantum smoothing of carrier density profiles to the drift-diffusion model. We used the DG model in 1-D and 2-D (for the first time) to simulate both bipolar and unipolar devices. Simulations of heavily-doped, short-base diodes indicated that the DG quantum

  20. Direct MD Simulations of Terahertz Absorption and 2D Spectroscopy Applied to Explosive Crystals.

    PubMed

    Katz, G; Zybin, S; Goddard, W A; Zeiri, Y; Kosloff, R

    2014-03-01

    A direct molecular dynamics simulation of the THz spectrum of a molecular crystal is presented. A time-dependent electric field is added to a molecular dynamics simulation of a crystal slab. The absorption spectrum is composed from the energy dissipated calculated from a series of applied pulses characterized by a carrier frequency. The spectrum of crystalline cyclotrimethylenetrinitramine (RDX) and triacetone triperoxide (TATP) were simulated with the ReaxFF force field. The proposed direct method avoids the linear response and harmonic approximations. A multidimensional extension of the spectroscopy is suggested and simulated based on the nonlinear response to a single polarized pulse of radiation in the perpendicular polarization direction. PMID:26274066

  1. Fast 2D fluid-analytical simulation of ion energy distributions and electromagnetic effects in multi-frequency capacitive discharges

    NASA Astrophysics Data System (ADS)

    Kawamura, E.; Lieberman, M. A.; Graves, D. B.

    2014-12-01

    A fast 2D axisymmetric fluid-analytical plasma reactor model using the finite elements simulation tool COMSOL is interfaced with a 1D particle-in-cell (PIC) code to study ion energy distributions (IEDs) in multi-frequency capacitive argon discharges. A bulk fluid plasma model, which solves the time-dependent plasma fluid equations for the ion continuity and electron energy balance, is coupled with an analytical sheath model, which solves for the sheath parameters. The time-independent Helmholtz equation is used to solve for the fields and a gas flow model solves for the steady-state pressure, temperature and velocity of the neutrals. The results of the fluid-analytical model are used as inputs to a PIC simulation of the sheath region of the discharge to obtain the IEDs at the target electrode. Each 2D fluid-analytical-PIC simulation on a moderate 2.2 GHz CPU workstation with 8 GB of memory took about 15-20 min. The multi-frequency 2D fluid-analytical model was compared to 1D PIC simulations of a symmetric parallel-plate discharge, showing good agreement. We also conducted fluid-analytical simulations of a multi-frequency argon capacitively coupled plasma (CCP) with a typical asymmetric reactor geometry at 2/60/162 MHz. The low frequency 2 MHz power controlled the sheath width and sheath voltage while the high frequencies controlled the plasma production. A standing wave was observable at the highest frequency of 162 MHz. We noticed that adding 2 MHz power to a 60 MHz discharge or 162 MHz to a dual frequency 2 MHz/60 MHz discharge can enhance the plasma uniformity. We found that multiple frequencies were not only useful for controlling IEDs but also plasma uniformity in CCP reactors.

  2. Numerical Simulations of 2-D Phase-Field Model with Convection

    NASA Astrophysics Data System (ADS)

    Xu, Ying; McDonough, J. M.; Tagavi, K. A.

    2003-11-01

    We present a 2-D isotropic phase-field model with convection induced by a flow field applied to freezing into a supercooled melt of pure substance, nickle. Numerical procedures and details of numerical parameters employed are provided, and the convergence of the numerical method is demonstrated by conducting grid-function convergence tests. Dendrite structures, temperature fields, pressure fields, streamlines and velocity vector fields are presented at several different times during the dendrite growth process. Comparisons of dendrites and temperature fields with and without convection indicate that the flow field has a significant effect on the growth rate of the dendrites; in particular, it inhibits the growth. In addition, the flow field influences the dendritic structural morphologies and thickness of the interface. Moreover, the dendrites behave as a solid body in the flow leading to stagnation points and other interesting flow features.

  3. 2D Quantum Simulation of MOSFET Using the Non Equilibrium Green's Function Method

    NASA Technical Reports Server (NTRS)

    Svizhenko, Alexel; Anantram, M. P.; Govindan, T. R.; Yan, Jerry (Technical Monitor)

    2000-01-01

    The objectives this viewgraph presentation summarizes include: (1) the development of a quantum mechanical simulator for ultra short channel MOSFET simulation, including theory, physical approximations, and computer code; (2) explore physics that is not accessible by semiclassical methods; (3) benchmarking of semiclassical and classical methods; and (4) study other two-dimensional devices and molecular structure, from discretized Hamiltonian to tight-binding Hamiltonian.

  4. Simulations of the infrared, Raman, and 2D-IR photon echo spectra of water in nanoscale silica pores

    DOE PAGESBeta

    Burris, Paul C.; Laage, Damien; Thompson, Ward H.

    2016-05-20

    Vibrational spectroscopy is frequently used to characterize nanoconfined liquids and probe the effect of the confining framework on the liquid structure and dynamics relative to the corresponding bulk fluid. However, it is still unclear what molecular-level information can be obtained from such measurements. In this Paper, we address this question by using molecular dynamics (MD) simulations to reproduce the linear infrared (IR), Raman, and two-dimensional IR (2D-IR) photon echo spectra for water confined within hydrophilic (hydroxyl-terminated) silica mesopores. To simplify the spectra the OH stretching region of isotopically dilute HOD in D2O is considered. An empirical mapping approach is usedmore » to obtain the OH vibrational frequencies, transition dipoles, and transition polarizabilities from the MD simulations. The simulated linear IR and Raman spectra are in good general agreement with measured spectra of water in mesoporous silica reported in the literature. The key effect of confinement on the water spectrum is a vibrational blueshift for OH groups that are closest to the pore interface. The blueshift can be attributed to the weaker hydrogen bonds (H-bonds) formed between the OH groups and silica oxygen acceptors. Non-Condon effects greatly diminish the contribution of these OH moieties to the linear IR spectrum, but these weaker H-bonds are readily apparent in the Raman spectrum. The 2D-IR spectra have not yet been measured and thus the present results represent a prediction. Lastly, the simulated spectra indicate that it should be possible to probe the slower spectral diffusion of confined water compared to the bulk liquid by analysis of the 2D-IR spectra.« less

  5. Radar Reflectivity Simulated by a 2-D Spectra Bin Model: Sensitivity of Cloud-aerosol Interaction

    NASA Technical Reports Server (NTRS)

    Li, Kiaowen; Tao, Wei-Kuo; Khain, Alexander; Simpson, Joanne; Johnson, Daniel

    2003-01-01

    The Goddard Cumulus Ensemble (GCE) model with bin spectra microphysics is used to simulate mesoscale convective systems.The model uses explicit bins to represent size spectra of cloud nuclei, water drops, ice crystals, snow and graupel. Each hydrometeorite category is described by 33 mass bins. The simulations provide a unique data set of simulated raindrop size distribution in a realistic dynamic frame. Calculations of radar parameters using simulated drop size distribution serve as an evaluation of numerical model performance. In addition, the GCE bin spectra modes is a very useful tool to study uncertainties related to radar observations; all the environmental parameters are precisely known. In this presentation, we concentrate on the discussion of Z-R (ZDR-R) relation in the simulated systems. Due to computational limitations, the spectra bin model has been run in two dimensions with 31 stretched vertical layers and 1026 horizontal grid points (1 km resolution). Two different cases, one in midlatitude continent, the other in tropical ocean, have been simulated. The continental case is a strong convection which lasted for two hours. The oceanic case is a persistent system with more than 10 hours' life span. It is shown that the simulated Z-R (ZDR-R) relations generally agree with observations using radar and rain gauge data. The spatial and temporal variations of Z-R relation in different locations are also analyzed. Impact of aerosols on cloud formation and raindrop size distribution was studied. Both clean (low CCN) and dirty (high CCN) cases are simulated. The Z-R relation is shown to vary considerable in the initial CCN concentrations.

  6. In vitro construction of 2D and 3D simulations of the murine hematopoietic niche.

    PubMed

    Chitteti, Brahmananda Reddy; Bethel, Monique; Voytik-Harbin, Sherry L; Kacena, Melissa A; Srour, Edward F

    2013-01-01

    Hematopoietic stem cells (HSC) undergo multilineage differentiation or self-renewal to maintain normal hematopoiesis and to sustain the size of the HSC pool throughout life. These processes are determined by a complex interplay of molecular signals between HSC and other cellular components such as osteoblasts (OB), stromal cells, endothelial cells, and a number of extracellular matrix (ECM) proteins. Through changes in its physical properties within the bone marrow (BM) microenvironment, collagen, which is one of the most critical ECM proteins, can modulate HSC function and maintenance of the competence of the hematopoietic niche (HN). At present, there is no consensus as to how different cellular elements of the niche collaborate and interact to promote HSC self-renewal or differentiation to maintain hematopoiesis. Deciphering these interactions and the impact of mechanical properties of the collagen microstructures within the HN has critical clinical implications in the areas of stem cell homing, engraftment, and maintenance of HSC function. In this chapter, we describe several of the in vitro methodologies for establishing and maintaining HSC in vitro including the isolation of OB, stromal cells, and hematopoietic progenitor cells, as well as the establishment of both two-dimensional (2D) and three-dimensional (3D) coculture systems.

  7. Fourier based methodology for simulating 2D-random shapes in heterogeneous materials

    NASA Astrophysics Data System (ADS)

    Mattrand, C.; Béakou, A.; Charlet, K.

    2015-08-01

    Gaining insights into the effects of microstructural details on materials behavior may be achieved by incorporating their attributes into numerical modeling. This requires us to make considerable efforts to feature heterogeneity morphology distributions and their spatial arrangement. This paper focuses on modeling the scatter observed in materials heterogeneity geometry. The proposed strategy is based on the development of a 1D-shape signature function representing the 2D-section of a given shape, on Fourier basis functions. The Fourier coefficients are then considered as random variables. This methodology has been applied to flax fibers which are gradually introduced into composite materials as a potential alternative to synthetic reinforcements. In this contribution, the influence of some underlying assumptions regarding the choice of one 1D-shape signature function, its discretization scheme and truncation level, and the best way of modeling the associated random variables is also investigated. Some configurations coming from the combination of these tuning parameters are found to be sufficiently relevant to render efficiently the morphometric factors of the observed fibers statistically speaking.

  8. Monte Carlo simulations of a novel Micromegas 2D array for proton dosimetry.

    PubMed

    Dolney, D; Ainsley, C; Hollebeek, R; Maughan, R

    2016-02-21

    Modern proton therapy affords control of the delivery of radiotherapeutic dose on fine length and temporal scales. The authors have developed a novel detector technology based on Micromesh Gaseous Structure (Micromegas) that is uniquely tailored for applications using therapeutic proton beams. An implementation of a prototype Micromegas detector for Monte Carlo using Geant4 is presented here. Comparison of simulation results with measurements demonstrates agreement in relative dose along the proton longitudinal dose profile to be 1%. The effect of a radioactive calibration source embedded in the chamber gas is demonstrated by measurements and reproduced by simulations, also at the 1% level. Our Monte Carlo simulations are shown to reproduce the time structure of ionization pulses produced by a double-scattering delivery system.

  9. Monte Carlo simulations of a novel Micromegas 2D array for proton dosimetry

    NASA Astrophysics Data System (ADS)

    Dolney, D.; Ainsley, C.; Hollebeek, R.; Maughan, R.

    2016-02-01

    Modern proton therapy affords control of the delivery of radiotherapeutic dose on fine length and temporal scales. The authors have developed a novel detector technology based on Micromesh Gaseous Structure (Micromegas) that is uniquely tailored for applications using therapeutic proton beams. An implementation of a prototype Micromegas detector for Monte Carlo using Geant4 is presented here. Comparison of simulation results with measurements demonstrates agreement in relative dose along the proton longitudinal dose profile to be 1%. The effect of a radioactive calibration source embedded in the chamber gas is demonstrated by measurements and reproduced by simulations, also at the 1% level. Our Monte Carlo simulations are shown to reproduce the time structure of ionization pulses produced by a double-scattering delivery system.

  10. Impact of uncertainties in parameterized cloud-microphysical processes on the simulated development of an idealized 2-D squall line

    NASA Astrophysics Data System (ADS)

    Michelson, Sara; Bao, Jian-Wen; Grell, Evelyn

    2016-04-01

    In this study, numerical model simulations of an idealized 2-D squall line are investigated using microphysics budget analysis. Four commonly-used microphysics schemes of various complexity are used in the simulations. Diagnoses of the source and sink terms of the hydrometeor budget equations reveal that the differences related to the assumptions of hydrometeor size-distributions between the schemes lead to the differences in the simulations due to the net effect of various microphysical processes on the interaction between latent heating/evaporative cooling and flow dynamics as the squall line develops. Results from this study also highlight the possibility that the advantage of double-moment formulations can be overshadowed by the uncertainties in the spectral definition of individual hydrometeor categories and spectrum-dependent microphysical processes.

  11. 3-D heterogeneous field data versus 2-D simulations. How can it be accomplished in a sedimentary porous formation?

    NASA Astrophysics Data System (ADS)

    Darvini, G.; Salandin, P.

    2009-12-01

    To analyze the impact of the hydraulic conductivity K spatial variability in a real field case (as an example to delimitate a well catchment), numerical simulations can be reasonably developed in a two-dimensional vertical average context. Nevertheless the plume evolution is a consequence of a more complex three-dimensional heterogeneous structure whose vertical variability dominates the dispersion phenomena at local scale. In larger domains, the effect of the vertical heterogeneity combines itself with that one due to the horizontal variability of K, and only when the plume has travelled a large number of (horizontal) integral scales, its evolution can be analyzed in a regional context, under the hypothesis that the transmissivity spatial distribution prevails. Until this limit is reached, the vertical and horizontal variability of K are combined to give a fully 3-D dispersion process. In all these situations, to successfully accomplish the 3-D heterogeneous structure of the aquifer in 2-D simulations, more than the planimetric depth-averaged variability of K must be accounted for. To define the uncertainty related to the use of different planimetric schematizations of the real hydraulic conductivity spatial distribution, we present here the results of some numerical experiments that compare the 3-D plume evolution with 2-D simulations developed by tacking into account different hydraulic conductivity distribution schematization, by considering a hierarchical architecture of media also. This description of a sedimentary formation combined with the finite size of the plume requires theoretical and numerical tools able to take into account the flow field inhomogeneity and the ergodicity lack that characterize the transport phenomena. Following this way it will be possible to quantify / reduce the uncertainty related to a 2-D schematization in a large number of real cases where the domain spans between the local and the regional scale and whose dimension may lead to

  12. Characterizing flow in oil reservoir rock using SPH: absolute permeability

    NASA Astrophysics Data System (ADS)

    Holmes, David W.; Williams, John R.; Tilke, Peter; Leonardi, Christopher R.

    2016-04-01

    In this paper, a three-dimensional smooth particle hydrodynamics (SPH) simulator for modeling grain scale fluid flow in porous rock is presented. The versatility of the SPH method has driven its use in increasingly complex areas of flow analysis, including flows related to permeable rock for both groundwater and petroleum reservoir research. While previous approaches to such problems using SPH have involved the use of idealized pore geometries (cylinder/sphere packs etc), in this paper we detail the characterization of flow in models with geometries taken from 3D X-ray microtomographic imaging of actual porous rock; specifically 25.12 % porosity dolomite. This particular rock type has been well characterized experimentally and described in the literature, thus providing a practical `real world' means of verification of SPH that will be key to its acceptance by industry as a viable alternative to traditional reservoir modeling tools. The true advantages of SPH are realized when adding the complexity of multiple fluid phases, however, the accuracy of SPH for single phase flow is, as yet, under developed in the literature and will be the primary focus of this paper. Flow in reservoir rock will typically occur in the range of low Reynolds numbers, making the enforcement of no-slip boundary conditions an important factor in simulation. To this end, we detail the development of a new, robust, and numerically efficient method for implementing no-slip boundary conditions in SPH that can handle the degree of complexity of boundary surfaces, characteristic of an actual permeable rock sample. A study of the effect of particle density is carried out and simulation results for absolute permeability are presented and compared to those from experimentation showing good agreement and validating the method for such applications.

  13. Numerical simulations of heavily polluted fine-grained sediment remobilization using 1D, 1D+, and 2D channel schematization.

    PubMed

    Kaiglová, Jana; Langhammer, Jakub; Jiřinec, Petr; Janský, Bohumír; Chalupová, Dagmar

    2015-03-01

    This article used various hydrodynamic and sediment transport models to analyze the potential and the limits of different channel schematizations. The main aim was to select and evaluate the most suitable simulation method for fine-grained sediment remobilization assessment. Three types of channel schematization were selected to study the flow potential for remobilizing fine-grained sediment in artificially modified channels. Schematization with a 1D cross-sectional horizontal plan, a 1D+ approach, splitting the riverbed into different functional zones, and full 2D mesh, adopted in MIKE by the DHI modeling suite, was applied to the study. For the case study, a 55-km stretch of the Bílina River, in the Czech Republic, Central Europe, which has been heavily polluted by the chemical and coal mining industry since the mid-twentieth century, was selected. Long-term exposure to direct emissions of toxic pollutants including heavy metals and persistent organic pollutants (POPs) resulted in deposits of pollutants in fine-grained sediments in the riverbed. Simulations, based on three hydrodynamic model schematizations, proved that for events not exceeding the extent of the riverbed profile, the 1D schematization can provide comparable results to a 2D model. The 1D+ schematization can improve accuracy while keeping the benefits of high-speed simulation and low requirements of input DEM data, but the method's suitability is limited by the channel properties. PMID:25687259

  14. Simulations of chemotaxis and random motility in 2D random porous domains.

    PubMed

    Jabbarzadeh, Ehsan; Abrams, Cameron F

    2007-02-01

    We discuss a generic computational model of eukariotic chemotaxis in 2D random porous domains. The model couples the fully time-dependent finite-difference solution of a reaction-diffusion equation for the concentration field of a chemoattractant to biased random walks representing individual chemotactic cells. We focus in particular on the influence of consumption of chemoattractant by the boundaries of obstacles with irregular shapes which are distributed randomly in the domain on the chemotactic response of the cells. Cells are stimulated to traverse a field of obstacles by a line source of chemoattractant. We find that the reactivity of the obstacle boundaries with respect to the chemoattractant strongly determines the transit time of cells through two primary mechanisms. The channeling effect arises because cells are effectively repelled from surfaces which consume chemoattractant, and opposing surfaces therefore act to keep cells in the middle of channels. This reduces traversal times relative to the case with unreactive boundaries, provided that the appropriate Péclet number relating the strength of reactivity to diffusion in governing chemoattractant transport is neither too low nor too high. The dead-zone effect arises due to a realistic threshold on the chemotactic response, which at steady state results in portions of the domain having no detectable gradient. Of these two, the channeling effect is responsible for 90% of the sensitivity of transit times to boundary reactivity. Based on these results, we speculate that it may be possible to tune the rates of cellular penetration into porous domains by engineering the reactivity of the internal surfaces to cytokines.

  15. Treatment of LBCs in 2D simulation of convection over hills

    NASA Astrophysics Data System (ADS)

    Tian, Wenshou; Guo, Zhenhai; Yu, Rucong

    2004-08-01

    A series of idealized model simulations are analyzed to determine the sensitivity of model results to different configurations of the lateral boundary conditions (LBCs) in simulating mesoscale shallow convection over hilly terrain. In the simulations with steady thermal forcing at the model surface, a radiation condition at both boundaries is the best choice under high wind conditions, and the best results are produced when both the normal velocities and the temperature are treated with the radiation scheme in which the phase speed is the same for different variables. When the background wind speed is reasonably small, the LBC configuration with either the radiation or the zero gradient condition at both boundaries tends to make the numerical solution unstable. The choice of a constant condition at the inflow boundary and a radiation outflow boundary condition is appropriate in most cases. In the simulations with diurnal thermal forcing at the model surface, different LBC schemes are combined together to reduce spurious signals induced by the outflow boundary. A specification inflow boundary condition, in which the velocity fields at the inflow boundary are provided using the time-dependent results of a simulation with periodic LBCs over a flat domain, is tested and the results indicate that the specification condition at the inflow boundary makes it possible to use a smaller model domain to obtain reasonable results. The model horizontal domain length should be greater than a critical length, which depends on the domain depth H and the angle between gravity wave phase lines and the vertical. An estimate of minimum domain length is given by[(H - z_i )/π U]sqrt {N^2 L_x^2 - 4π ^2 U^2 } , where N and U are the background stability and wind speed, respectively, L x is the typical gravity wavelength scale, and z i is the convective boundary layer (CBL) depth.

  16. An improved parallel SPH approach to solve 3D transient generalized Newtonian free surface flows

    NASA Astrophysics Data System (ADS)

    Ren, Jinlian; Jiang, Tao; Lu, Weigang; Li, Gang

    2016-08-01

    In this paper, a corrected parallel smoothed particle hydrodynamics (C-SPH) method is proposed to simulate the 3D generalized Newtonian free surface flows with low Reynolds number, especially the 3D viscous jets buckling problems are investigated. The proposed C-SPH method is achieved by coupling an improved SPH method based on the incompressible condition with the traditional SPH (TSPH), that is, the improved SPH with diffusive term and first-order Kernel gradient correction scheme is used in the interior of the fluid domain, and the TSPH is used near the free surface. Thus the C-SPH method possesses the advantages of two methods. Meanwhile, an effective and convenient boundary treatment is presented to deal with 3D multiple-boundary problem, and the MPI parallelization technique with a dynamic cells neighbor particle searching method is considered to improve the computational efficiency. The validity and the merits of the C-SPH are first verified by solving several benchmarks and compared with other results. Then the viscous jet folding/coiling based on the Cross model is simulated by the C-SPH method and compared with other experimental or numerical results. Specially, the influences of macroscopic parameters on the flow are discussed. All the numerical results agree well with available data, and show that the C-SPH method has higher accuracy and better stability for solving 3D moving free surface flows over other particle methods.

  17. A mathematical model for a didactic device able to simulate a 2D Newtonian gravitational field

    NASA Astrophysics Data System (ADS)

    De Marchi, Fabrizio

    2015-01-01

    In this paper we propose a mathematical model to describe a theoretical device able to simulate an inverse-square force on a test mass moving on a horizontal plane. We use two pulleys, a counterweight, a wire and a smooth rail, in addition to the test mass. The tension of the wire (i.e. the attractive force on the test mass) is determined by the position of a counterweight free to move on a rail placed under the plane. The profile of the rail is calculated in order to obtain the required Newtonian force. Details of this calculation are reported in the paper, and numerical simulations are provided in order to investigate the stability of the orbits under the effect of the main friction forces and other perturbative effects. This work points out that there are some criticalities intrinsic to the apparatus and gives some suggestions about how to minimize their impact.

  18. Mixed-RKDG Finite Element Methods for the 2-D Hydrodynamic Model for Semiconductor Device Simulation

    DOE PAGESBeta

    Chen, Zhangxin; Cockburn, Bernardo; Jerome, Joseph W.; Shu, Chi-Wang

    1995-01-01

    In this paper we introduce a new method for numerically solving the equations of the hydrodynamic model for semiconductor devices in two space dimensions. The method combines a standard mixed finite element method, used to obtain directly an approximation to the electric field, with the so-called Runge-Kutta Discontinuous Galerkin (RKDG) method, originally devised for numerically solving multi-dimensional hyperbolic systems of conservation laws, which is applied here to the convective part of the equations. Numerical simulations showing the performance of the new method are displayed, and the results compared with those obtained by using Essentially Nonoscillatory (ENO) finite difference schemes. Frommore » the perspective of device modeling, these methods are robust, since they are capable of encompassing broad parameter ranges, including those for which shock formation is possible. The simulations presented here are for Gallium Arsenide at room temperature, but we have tested them much more generally with considerable success.« less

  19. 2D simulations based on general time-dependent reciprocal relation for LFEIT.

    PubMed

    Karadas, Mursel; Gencer, Nevzat Guneri

    2015-08-01

    Lorentz field electrical impedance tomography (LFEIT) is a newly proposed technique for imaging the conductivity of the tissues by measuring the electromagnetic induction under the ultrasound pressure field. In this paper, the theory and numerical simulations of the LFEIT are reported based on the general time dependent formulation. In LFEIT, a phased array ultrasound probe is used to introduce a current distribution inside a conductive body. The velocity current occurs, due to the movement of the conductive particles under a static magnetic field. In order to sense this current, a receiver coil configuration that surrounds the volume conductor is utilized. Finite Element Method (FEM) is used to carry out the simulations of LFEIT. It is shown that, LFEIT can be used to reconstruct the conductivity even up to 50% perturbation in the initial conductivity distribution. PMID:26736569

  20. The ideal tearing mode: 2D MHD simulations in the linear and nonlinear regimes

    NASA Astrophysics Data System (ADS)

    Landi, Simone; Del Zanna, Luca; Pucci, Fulvia; Velli, Marco; Papini, Emanuele

    2015-04-01

    We present compressible, resistive MHD numerical simulations of the linear and nonlinear evolution of the tearing instability, for both Harris sheet and force-free initial equilibrium configurations. We analyze the behavior of a current sheet with aspect ratio S1/3, where S is the Lundquist number. This scaling has been recently recognized to be the threshold for fast reconnection occurring on the ideal Alfvenic timescale, with a maximum growth rate that becomes asymptotically independent on S. Our simulations clearly confirm that the tearing instability maximum growth rate and the full dispersion relation are exactly those predicted by the linear theory, at least for the values of S explored here. In the nonlinear stage, we notice the rapid onset and subsequent coalescence of plasmoids, as observed in previous simulations of the Sweet-Parker reconnection scenario. These findings strongly support the idea that in a fully dynamic regime, as soon as current sheets develop and reach the critical threshold in their aspect ratio of S1/3 (occurring well before the Sweet-Parker configuration is able to form), the tearing mode is able to trigger fast reconnection and plasmoids formation on Alfvenic timescales, as required to explain the violent flare activity often observed in solar and astrophysical plasmas.

  1. Comparisons between tokamak fueling of gas puffing and supersonic molecular beam injection in 2D simulations

    SciTech Connect

    Zhou, Y. L.; Wang, Z. H.; Xu, X. Q.; Li, H. D.; Feng, H.; Sun, W. G.

    2015-01-15

    Plasma fueling with high efficiency and deep injection is very important to enable fusion power performance requirements. It is a powerful and efficient way to study neutral transport dynamics and find methods of improving the fueling performance by doing large scale simulations. Two basic fueling methods, gas puffing (GP) and supersonic molecular beam injection (SMBI), are simulated and compared in realistic divertor geometry of the HL-2A tokamak with a newly developed module, named trans-neut, within the framework of BOUT++ boundary plasma turbulence code [Z. H. Wang et al., Nucl. Fusion 54, 043019 (2014)]. The physical model includes plasma density, heat and momentum transport equations along with neutral density, and momentum transport equations. Transport dynamics and profile evolutions of both plasma and neutrals are simulated and compared between GP and SMBI in both poloidal and radial directions, which are quite different from one and the other. It finds that the neutrals can penetrate about four centimeters inside the last closed (magnetic) flux surface during SMBI, while they are all deposited outside of the LCF during GP. It is the radial convection and larger inflowing flux which lead to the deeper penetration depth of SMBI and higher fueling efficiency compared to GP.

  2. Comparisons between tokamak fueling of gas puffing and supersonic molecular beam injection in 2D simulations

    SciTech Connect

    Zhou, Y. L.; Wang, Z. H.; Xu, X. Q.; Li, H. D.; Feng, H.; Sun, W. G.

    2015-01-09

    Plasma fueling with high efficiency and deep injection is very important to enable fusion power performance requirements. It is a powerful and efficient way to study neutral transport dynamics and find methods of improving the fueling performance by doing large scale simulations. Furthermore, two basic fueling methods, gas puffing (GP) and supersonic molecular beam injection (SMBI), are simulated and compared in realistic divertor geometry of the HL-2A tokamak with a newly developed module, named trans-neut, within the framework of BOUT++ boundary plasma turbulence code [Z. H. Wang et al., Nucl. Fusion 54, 043019 (2014)]. The physical model includes plasma density, heat and momentum transport equations along with neutral density, and momentum transport equations. In transport dynamics and profile evolutions of both plasma and neutrals are simulated and compared between GP and SMBI in both poloidal and radial directions, which are quite different from one and the other. It finds that the neutrals can penetrate about four centimeters inside the last closed (magnetic) flux surface during SMBI, while they are all deposited outside of the LCF during GP. Moreover, it is the radial convection and larger inflowing flux which lead to the deeper penetration depth of SMBI and higher fueling efficiency compared to GP.

  3. Comparisons between tokamak fueling of gas puffing and supersonic molecular beam injection in 2D simulations

    DOE PAGESBeta

    Zhou, Y. L.; Wang, Z. H.; Xu, X. Q.; Li, H. D.; Feng, H.; Sun, W. G.

    2015-01-09

    Plasma fueling with high efficiency and deep injection is very important to enable fusion power performance requirements. It is a powerful and efficient way to study neutral transport dynamics and find methods of improving the fueling performance by doing large scale simulations. Furthermore, two basic fueling methods, gas puffing (GP) and supersonic molecular beam injection (SMBI), are simulated and compared in realistic divertor geometry of the HL-2A tokamak with a newly developed module, named trans-neut, within the framework of BOUT++ boundary plasma turbulence code [Z. H. Wang et al., Nucl. Fusion 54, 043019 (2014)]. The physical model includes plasma density,more » heat and momentum transport equations along with neutral density, and momentum transport equations. In transport dynamics and profile evolutions of both plasma and neutrals are simulated and compared between GP and SMBI in both poloidal and radial directions, which are quite different from one and the other. It finds that the neutrals can penetrate about four centimeters inside the last closed (magnetic) flux surface during SMBI, while they are all deposited outside of the LCF during GP. Moreover, it is the radial convection and larger inflowing flux which lead to the deeper penetration depth of SMBI and higher fueling efficiency compared to GP.« less

  4. GodunovSPH with shear viscosity: implementation and tests

    NASA Astrophysics Data System (ADS)

    Cha, Seung-Hoon; Wood, Matt A.

    2016-05-01

    The acceleration and energy dissipation terms due to the shear viscosity have been implemented and tested in GodunovSPH. The double summation method has been employed to avoid the well-known numerical noise of the second derivative in particle based codes. The plane Couette flow with various initial and boundary conditions have been used as tests, and the numerical and analytical results show a good agreement. Not only the viscosity-only calculation, but the full hydrodynamics simulations have been performed, and they show expected results as well. The very low kinematic viscosity simulations show a turbulent pattern when the Reynolds number exceeds ˜102. The critical value of the Reynolds number at the transition point of the laminar and turbulent flows coincides with the previous works approximately. A smoothed dynamic viscosity has been suggested to describe the individual kinematic viscosity of particles. The infinitely extended Couette flow which has two layers of different viscosities has been simulated to check the smoothed dynamic viscosity, and the result agrees well with the analytic solution. In order to compare the standard smoothed particle hydrodynamics (SPH) and GodunovSPH, the two layers test has been performed again with a density contrast. GodunovSPH shows less dispersion than the standard SPH, but there is no significant difference in the results. The results of the viscous ring evolution has also been presented as well, and the numerical results agrees with the analytic solution.

  5. A GPU Simulation Tool for Training and Optimisation in 2D Digital X-Ray Imaging

    PubMed Central

    Gallio, Elena; Rampado, Osvaldo; Gianaria, Elena; Bianchi, Silvio Diego; Ropolo, Roberto

    2015-01-01

    Conventional radiology is performed by means of digital detectors, with various types of technology and different performance in terms of efficiency and image quality. Following the arrival of a new digital detector in a radiology department, all the staff involved should adapt the procedure parameters to the properties of the detector, in order to achieve an optimal result in terms of correct diagnostic information and minimum radiation risks for the patient. The aim of this study was to develop and validate a software capable of simulating a digital X-ray imaging system, using graphics processing unit computing. All radiological image components were implemented in this application: an X-ray tube with primary beam, a virtual patient, noise, scatter radiation, a grid and a digital detector. Three different digital detectors (two digital radiography and a computed radiography systems) were implemented. In order to validate the software, we carried out a quantitative comparison of geometrical and anthropomorphic phantom simulated images with those acquired. In terms of average pixel values, the maximum differences were below 15%, while the noise values were in agreement with a maximum difference of 20%. The relative trends of contrast to noise ratio versus beam energy and intensity were well simulated. Total calculation times were below 3 seconds for clinical images with pixel size of actual dimensions less than 0.2 mm. The application proved to be efficient and realistic. Short calculation times and the accuracy of the results obtained make this software a useful tool for training operators and dose optimisation studies. PMID:26545097

  6. 2D simulations of transport dynamics during tokamak fuelling by supersonic molecular beam injection

    NASA Astrophysics Data System (ADS)

    Wang, Z. H.; Xu, X. Q.; Xia, T. Y.; Rognlien, T. D.

    2014-04-01

    Time-dependent transport of both plasma and neutrals is simulated during supersonic molecular beam injection (SMBI) yielding the evolution of edge plasma and neutral profiles. The SMBI model is included as a module, called trans-neut, within the original BOUT++ boundary plasma turbulence code. Results of calculations are reported for the realistic divertor geometry of the HL-2A tokamak. The model can also be used to study the effect of gas puffing. A seven-field fluid model couples plasma density, heat, and momentum transport equations together with neutral density and momentum transport equations for both molecules and atoms. Collisional interactions between molecules, atoms, and plasma include dissociation, ionization, recombination and charge-exchange effects. Sheath boundary conditions and particle recycling are applied at both the wall and the divertor plates. A localized boundary condition of constant molecular flux (product of density times speed) is applied at the outermost flux surface to model the SMBI. Steady state profiles with and without particle recycling are achieved before SMBI. During SMBI, the simulation shows that neutrals can penetrate several centimetres inside the last closed (magnetic) flux surface (LCFS). Along the SMBI path, plasma density increases while plasma temperature decreases. The molecule penetration depth depends on both the SMBI flux and the initial plasma density and temperature along its path. As the local plasma density increases substantially, molecule and atom penetration depths decrease due to their higher dissociation and ionization rates if the electron temperature does not drop too low. Dynamic poloidal spreading of the enhanced plasma density region is observed due to rapid ion flow along the magnetic field (parallel) driven by a parallel pressure asymmetry during SMBI. Profile relaxation in the radial and poloidal directions is simulated after SMBI termination, showing that the plasma returns to pre-SMBI conditions on

  7. A GPU Simulation Tool for Training and Optimisation in 2D Digital X-Ray Imaging.

    PubMed

    Gallio, Elena; Rampado, Osvaldo; Gianaria, Elena; Bianchi, Silvio Diego; Ropolo, Roberto

    2015-01-01

    Conventional radiology is performed by means of digital detectors, with various types of technology and different performance in terms of efficiency and image quality. Following the arrival of a new digital detector in a radiology department, all the staff involved should adapt the procedure parameters to the properties of the detector, in order to achieve an optimal result in terms of correct diagnostic information and minimum radiation risks for the patient. The aim of this study was to develop and validate a software capable of simulating a digital X-ray imaging system, using graphics processing unit computing. All radiological image components were implemented in this application: an X-ray tube with primary beam, a virtual patient, noise, scatter radiation, a grid and a digital detector. Three different digital detectors (two digital radiography and a computed radiography systems) were implemented. In order to validate the software, we carried out a quantitative comparison of geometrical and anthropomorphic phantom simulated images with those acquired. In terms of average pixel values, the maximum differences were below 15%, while the noise values were in agreement with a maximum difference of 20%. The relative trends of contrast to noise ratio versus beam energy and intensity were well simulated. Total calculation times were below 3 seconds for clinical images with pixel size of actual dimensions less than 0.2 mm. The application proved to be efficient and realistic. Short calculation times and the accuracy of the results obtained make this software a useful tool for training operators and dose optimisation studies. PMID:26545097

  8. A GPU Simulation Tool for Training and Optimisation in 2D Digital X-Ray Imaging.

    PubMed

    Gallio, Elena; Rampado, Osvaldo; Gianaria, Elena; Bianchi, Silvio Diego; Ropolo, Roberto

    2015-01-01

    Conventional radiology is performed by means of digital detectors, with various types of technology and different performance in terms of efficiency and image quality. Following the arrival of a new digital detector in a radiology department, all the staff involved should adapt the procedure parameters to the properties of the detector, in order to achieve an optimal result in terms of correct diagnostic information and minimum radiation risks for the patient. The aim of this study was to develop and validate a software capable of simulating a digital X-ray imaging system, using graphics processing unit computing. All radiological image components were implemented in this application: an X-ray tube with primary beam, a virtual patient, noise, scatter radiation, a grid and a digital detector. Three different digital detectors (two digital radiography and a computed radiography systems) were implemented. In order to validate the software, we carried out a quantitative comparison of geometrical and anthropomorphic phantom simulated images with those acquired. In terms of average pixel values, the maximum differences were below 15%, while the noise values were in agreement with a maximum difference of 20%. The relative trends of contrast to noise ratio versus beam energy and intensity were well simulated. Total calculation times were below 3 seconds for clinical images with pixel size of actual dimensions less than 0.2 mm. The application proved to be efficient and realistic. Short calculation times and the accuracy of the results obtained make this software a useful tool for training operators and dose optimisation studies.

  9. 2D fluid simulations of discharges at atmospheric pressure in reactive gas mixtures

    NASA Astrophysics Data System (ADS)

    Bourdon, Anne

    2015-09-01

    Since a few years, low-temperature atmospheric pressure discharges have received a considerable interest as they efficiently produce many reactive chemical species at a low energy cost. This potential is of great interest for a wide range of applications as plasma assisted combustion or biomedical applications. Then, in current simulations of atmospheric pressure discharges, there is the need to take into account detailed kinetic schemes. It is interesting to note that in some conditions, the kinetics of the discharge may play a role on the discharge dynamics itself. To illustrate this, we consider the case of the propagation of He-N2 discharges in long capillary tubes, studied for the development of medical devices for endoscopic applications. Simulation results put forward that the discharge dynamics and structure depend on the amount of N2 in the He-N2 mixture. In particular, as the amount of N2 admixture increases, the discharge propagation velocity in the tube increases, reaches a maximum for about 0 . 1 % of N2 and then decreases, in agreement with experiments. For applications as plasma assisted combustion with nanosecond repetitively pulsed discharges, there is the need to handle the very different timescales of the nanosecond discharge with the much longer (micro to millisecond) timescales of combustion processes. This is challenging from a computational point of view. It is also important to better understand the coupling of the plasma induced chemistry and the gas heating. To illustrate this, we present the simulation of the flame ignition in lean mixtures by a nanosecond pulsed discharge between two point electrodes. In particular, among the different discharge regimes of nanosecond repetitively pulsed discharges, a ``spark'' regime has been put forward in the experiments, with an ultra-fast local heating of the gas. For other discharge regimes, the gas heating is much weaker. We have simulated the nanosecond spark regime and have observed shock waves

  10. Real-time 2D floating-point fast Fourier transforms for seeker simulation

    NASA Astrophysics Data System (ADS)

    Chamberlain, Richard; Lord, Eric; Shand, David J.

    2002-07-01

    The floating point Fast Fourier Transform (FFT) is one of the most useful basic functions available to the image and signal processing engineer allowing many complex and detailed special functions to be implemented more simply in the frequency domain. In the Hardware-in-the-Loop field an image transformed using FFT would allow the designer to think about accurate frequency based simulation of seeker lens effects, motion blur, detector transfer functions and much more. Unfortunately, the transform requires many hundreds of thousands or millions of floating point operations on a single modest sized image making it impractical for realtime Hardware-in-the-Loop systems. .until now. This paper outlines the development, by Nallatech, of an FPGA based IEEE floating point core. It traces the subsequent use of this core to develop a full 256 X 256 FFT and filter process implemented on COTS hardware at frame rates up to 150Hz. This transform can be demonstrated to model optical transfer functions at a far greater accuracy than the current spatial models. Other applications and extensions of this technique will be discussed such as filtering for image tracking algorithms and in the simulation of radar processing in the frequency domain.

  11. Yielding in a strongly aggregated colloidal gel: 2D simulations and theory

    NASA Astrophysics Data System (ADS)

    Roy, Saikat; Tirumkudulu, Mahesh

    2015-11-01

    We investigated the micro-structural details and the mechanical response under uniaxial compression of the strongly aggregating gel starting from low to high packing fraction.The numerical simulations account for short-range inter-particle attractions, normal and tangential deformation at particle contacts,sliding and rolling friction, and preparation history. It is observed that in the absence of rolling resistance(RR),the average coordination number varies only slightly with compaction whereas it is significant in the presence of RR. The particle contact distribution is isotropic throughout the consolidation process. In both cases, the yield strain is constant with the volume fraction. The modulus values are very similar at different attraction, and with and without RR implying that the elastic modulus does not scale with attraction.The modulus was found to be a weak function of the preparation history. The increase in yield stress with volume fraction is a consequence of the increased elastic modulus of the network. However, the yield stress scales similarly both with and without RR. The power law exponent of 5.4 is in good agreement with previous simulation results. A micromechanical theory is also proposed to describe the stress versus strain relation for the gelled network.

  12. Quantum simulation of a heterojunction vertical tunnel FET based on 2D transition metal dichalcogenides

    NASA Astrophysics Data System (ADS)

    Cao, Jiang; Cresti, Alessandro; Esseni, David; Pala, Marco

    2016-02-01

    We simulate a band-to-band tunneling field-effect transistor based on a vertical heterojunction of single-layer MoS2 and WTe2, by exploiting the non-equilibrium Green's function method and including electron-phonon scattering. For both in-plane and out-of-plane transport, we attempt to calibrate out models to the few available experimental results. We focus on the role of chemical doping and back-gate biasing, and investigate the off-state physics of this device by analyzing the influence of the top-gate geometrical alignment on the device performance. The device scalability as a function of gate length is also studied. Finally, we present two metrics for the switching delay and energy of the device. Our simulations indicate that vertical field-effect transistors based on transition metal dichalcogenides can provide very small values of sub-threshold swing when properly designed in terms of doping concentration and top-gate extension length.

  13. The cone penetration test and 2D imaging resistivity as tools to simulate the distribution of hydrocarbons in soil

    NASA Astrophysics Data System (ADS)

    Pérez-Corona, M.; García, J. A.; Taller, G.; Polgár, D.; Bustos, E.; Plank, Z.

    2016-02-01

    The purpose of geophysical electrical surveys is to determine the subsurface resistivity distribution by making measurements on the ground surface. From these measurements, the true resistivity of the subsurface can be estimated. The ground resistivity is related to various geological parameters, such as the mineral and fluid content, porosity and degree of water saturation in the rock. Electrical resistivity surveys have been used for many decades in hydrogeological, mining and geotechnical investigations. More recently, they have been used for environmental surveys. To obtain a more accurate subsurface model than is possible with a simple 1-D model, a more complex model must be used. In a 2-D model, the resistivity values are allowed to vary in one horizontal direction (usually referred to as the x direction) but are assumed to be constant in the other horizontal (the y) direction. A more realistic model would be a fully 3-D model where the resistivity values are allowed to change in all three directions. In this research, a simulation of the cone penetration test and 2D imaging resistivity are used as tools to simulate the distribution of hydrocarbons in soil.

  14. A hierarchical lattice spring model to simulate the mechanics of 2-D materials-based composites

    NASA Astrophysics Data System (ADS)

    Brely, Lucas; Bosia, Federico; Pugno, Nicola

    2015-07-01

    In the field of engineering materials, strength and toughness are typically two mutually exclusive properties. Structural biological materials such as bone, tendon or dentin have resolved this conflict and show unprecedented damage tolerance, toughness and strength levels. The common feature of these materials is their hierarchical heterogeneous structure, which contributes to increased energy dissipation before failure occurring at different scale levels. These structural properties are the key to exceptional bioinspired material mechanical properties, in particular for nanocomposites. Here, we develop a numerical model in order to simulate the mechanisms involved in damage progression and energy dissipation at different size scales in nano- and macro-composites, which depend both on the heterogeneity of the material and on the type of hierarchical structure. Both these aspects have been incorporated into a 2-dimensional model based on a Lattice Spring Model, accounting for geometrical nonlinearities and including statistically-based fracture phenomena. The model has been validated by comparing numerical results to continuum and fracture mechanics results as well as finite elements simulations, and then employed to study how structural aspects impact on hierarchical composite material properties. Results obtained with the numerical code highlight the dependence of stress distributions on matrix properties and reinforcement dispersion, geometry and properties, and how failure of sacrificial elements is directly involved in the damage tolerance of the material. Thanks to the rapidly developing field of nanocomposite manufacture, it is already possible to artificially create materials with multi-scale hierarchical reinforcements. The developed code could be a valuable support in the design and optimization of these advanced materials, drawing inspiration and going beyond biological materials with exceptional mechanical properties.

  15. KEEN and KEEPN wave simulations from 2D to 4D

    NASA Astrophysics Data System (ADS)

    Mehrenberger, Michel; Afeyan, Bedros; Larson, David; Crouseilles, Nicolas; Casas, Fernando; Faou, Erwan; Dodhy, Adila; Sonnendrucker, Eric; Shoucri, Magdi

    2015-11-01

    We show for well-driven KEEN (Kinetic Electrostatic Electron Nonlinear) waves and their analogs in pair plasmas KEEPN (Positron) waves, how the dynamics is captured in a variety of complimentary numerical approaches. Symplectic integration and quadrature node based techniques are deployed to achieve satisfactory results in the long time evolution of highly nonlinear, kinetic, non-stationary, self-organized structures in phase space. Fixed and composite velocity grid arbitrary-order interpolation approaches have advantages we highlight. Adaptivity to local phase space density morphological structures will be discussed starting within the framework of the Shape Function Kinetics (SFK) approach. Fine resolution in velocity only in the range affected by KEEN waves makes for more efficient simulations, especially in higher dimensions. We explore the parameter space of unequal electron and positron temperatures as well as the effects of a relative drift velocity in their initial conditions. Ponderomotively driven KEEPN waves have many novelties when compared to KEEN waves, such as double, staggered, vortex structures, which we highlight. Work supported by the AFOSR and OFES.

  16. The Plasma Wake Downstream of Lunar Topographic Obstacles: Preliminary Results from 2D Particle Simulations

    NASA Technical Reports Server (NTRS)

    Zimmerman, Michael I.; Farrell, W. M.; Snubbs, T. J.; Halekas, J. S.

    2011-01-01

    Anticipating the plasma and electrical environments in permanently shadowed regions (PSRs) of the moon is critical in understanding local processes of space weathering, surface charging, surface chemistry, volatile production and trapping, exo-ion sputtering, and charged dust transport. In the present study, we have employed the open-source XOOPIC code [I] to investigate the effects of solar wind conditions and plasma-surface interactions on the electrical environment in PSRs through fully two-dimensional pattic1e-in-cell simulations. By direct analogy with current understanding of the global lunar wake (e.g., references) deep, near-terminator, shadowed craters are expected to produce plasma "mini-wakes" just leeward of the crater wall. The present results (e.g., Figure I) are in agreement with previous claims that hot electrons rush into the crater void ahead of the heavier ions, fanning a negative cloud of charge. Charge separation along the initial plasma-vacuum interface gives rise to an ambipolar electric field that subsequently accelerates ions into the void. However, the situation is complicated by the presence of the dynamic lunar surface, which develops an electric potential in response to local plasma currents (e.g., Figure Ia). In some regimes, wake structure is clearly affected by the presence of the charged crater floor as it seeks to achieve current balance (i.e. zero net current to the surface).

  17. Ion Dynamics at a Rippled Quasi-parallel Shock: 2D Hybrid Simulations

    NASA Astrophysics Data System (ADS)

    Hao, Yufei; Lu, Quanming; Gao, Xinliang; Wang, Shui

    2016-05-01

    In this paper, two-dimensional hybrid simulations are performed to investigate ion dynamics at a rippled quasi-parallel shock. The results show that the ripples around the shock front are inherent structures of a quasi-parallel shock, and the re-formation of the shock is not synchronous along the surface of the shock front. By following the trajectories of the upstream ions, we find that these ions behave differently when they interact with the shock front at different positions along the shock surface. The upstream particles are transmitted more easily through the upper part of a ripple, and the corresponding bulk velocity downstream is larger, where a high-speed jet is formed. In the lower part of the ripple, the upstream particles tend to be reflected by the shock. Ions reflected by the shock may suffer multiple-stage acceleration when moving along the shock surface or trapped between the upstream waves and the shock front. Finally, these ions may escape further upstream or move downstream; therefore, superthermal ions can be found both upstream and downstream.

  18. SPH Methods in the Modelling of Compact Objects

    NASA Astrophysics Data System (ADS)

    Rosswog, Stephan

    2015-12-01

    We review the current status of compact object simulations that are based on the smooth particle hydrodynamics (SPH) method. The first main part of this review is dedicated to SPH as a numerical method. We begin by discussing relevant kernel approximation techniques and discuss the performance of different kernel functions. Subsequently, we review a number of different SPH formulations of Newtonian, special- and general relativistic ideal fluid dynamics. We particularly point out recent developments that increase the accuracy of SPH with respect to commonly used techniques. The second main part of the review is dedicated to the application of SPH in compact object simulations. We discuss encounters between two white dwarfs, between two neutron stars and between a neutron star and a stellar-mass black hole. For each type of system, the main focus is on the more common, gravitational wave-driven binary mergers, but we also discuss dynamical collisions as they occur in dense stellar systems such as cores of globular clusters.

  19. Origin of energetic ions observed in the terrestrial ion foreshock : 2D full-particle simulations

    NASA Astrophysics Data System (ADS)

    Savoini, Philippe; Lembege, bertrand

    2016-04-01

    Collisionless shocks are well-known structures in astrophysical environments which dissipate bulk flow kinetic energy and accelerate large fraction of particle. Spacecrafts have firmly established the existence of the so-called terrestrial foreshock region magnetically connected to the shock and filled by two distinct populations in the quasi-perpendicular shock region (i.e. for 45r{ } ≤ quad θ Bn quad ≤ 90r{ }, where θ Bn is the angle between the shock normal and the upstream magnetic field) : (i) the field-aligned ion beams or `` FAB '' characterized by a gyrotropic distributionsout{,} and (ii) the gyro-phase bunched ions or `` GPB '' characterized by a NON gyrotropic distribution. The present work is based on the use of two dimensional PIC simulation of a curved shock and associated foreshock region where full curvature effects, time of flight effects and both electrons and ions dynamics are fully described by a self consistent approach. Our previous analysis (Savoini et Lembège, 2015) has evidenced that these two types of backstreaming populations can originate from the shock front itself without invoking any local diffusion by ion beam instabilities. Present results are focussed on individual ion trajectories and evidence that "FAB" population is injected into the foreshock mainly along the shock front whereas the "GPB" population penetrates more deeply the shock front. Such differences explain why the "FAB" population loses their gyro-phase coherency and become gyrotropic which is not the case for the "GPB". The impact of these different injection features on the energy gain for each ion population will be presented in détails. Savoini, P. and B. Lembège (2015), `` Production of nongyrotropic and gyrotropic backstreaming ion distributions in the quasi-perpendicular ion foreshock région '', J. Geophys. Res., 120, pp 7154-7171, doi = 10.1002/2015JA021018.

  20. 2D conditional simulation of channels on wells using a random walk approach

    NASA Astrophysics Data System (ADS)

    Wang, Jiahua; Wang, Xiangbo; Ren, Changlin

    2009-03-01

    Channel modeling is one of the popular topics in the application of geostatistics to fluvial reservoir modeling. This paper presents an approach to designing channels which have a general flow direction through sand well locations and which avoid shale well locations. This approach is named the random walk on graphs of well locations, and is applied to model channel reservoirs. This modeling process consists of two parts: one direction walk modeling and two direction walk modeling. The first model aims to determine each channel location by the use of a transition probability with a random walk essentially in the main flow direction, say the north-south direction, while the second model simulates different channels that can be oriented in both directions, either from north to south or from south to north. In both parts of the model, the transition probability is estimated based on two coefficients: one is the correlation coefficient of channel observations; the other is the obstacle coefficient of non-channel observations. A case study with a dense array of 332 wells is presented using the proposed random walk model. For the purpose of model verification, channel maps created by the random walk are compared to the hand-drawn channel maps made by geologists. The results show a good agreement in both types of maps, but in contrast to the single map supplied by geologists, the random walk model is capable of generating many realizations of channel configuration, hence allowing for uncertainty evaluation. A limitation of this approach, related to the influence of the number of wells, is discussed.

  1. Observation and simulation of heterogeneous 2D water and solute flow processes in ditch beds for subsequent catchment modelling

    NASA Astrophysics Data System (ADS)

    Dages, Cecile; Samouelian, Anatja; Lanoix, Marthe; Dollinger, Jeanne; Chakkour, Sara; Chovelon, Gabrielle; Trabelsi, Khouloud; Voltz, Marc

    2015-04-01

    Ditches are involved in the transfer of pesticide to surface and groundwaters (e.g. Louchart et al., 2001). Soil horizons underlying ditch beds may present specific soil characteristics compared to neighbouring field soils due to erosion/deposition processes, to the specific biological activities (rooting dynamic and animal habitat) in the ditches (e.g. Vaughan et al., 2008) and to management practices (burning, dredging, mowing,...). Moreover, in contrast to percolation processes in field soils that can be assumed to be mainly 1D vertical, those occurring in the ditch beds are by essence 2D or even 3D. Nevertheless, due to a lake of knowledge, these specific aspects of transfer within ditch beds are generally omitted for hydrological simulation at the catchment scale (Mottes et al., 2014). Accordingly, the aims of this study were i) to characterize subsurface solute transfer through ditch beds and ii) to determine equivalent hydraulic parameters of the ditch beds for use in catchment scale hydrological simulations. A complementary aim was to evaluate the error in predictions performed when percolation in ditches is assumed to be similar to that in the neighbouring field soil. First, bromide transfer experiments were performed on undisturbed soil column (15 cm long with a 15 cm inner-diameter), horizontally and vertically sampled within each soil horizon underlying a ditch bed and within the neighboring field. Columns were sampled at the Roujan catchment (Hérault, France), which belongs to the long term Mediterranean hydrological observatory OMERE (Voltz and Albergel, 2002). Second, for each column, a set of parameters was determined by inverse optimization with mobile-immobile or dual permeability models, with CXTFIT (Toride et al., 1999) or with HYDRUS (Simunek et al., 1998). Third, infiltration and percolation in the ditch was simulated by a 2D flow domain approach considering the 2D variation in hydraulic properties of the cross section of a ditch bed. Last

  2. Simulating the mobility of meteoric 10Be in the landscape through a coupled soil-hillslope model (Be2D)

    NASA Astrophysics Data System (ADS)

    Campforts, Benjamin; Vanacker, Veerle; Vanderborght, Jan; Baken, Stijn; Smolders, Erik; Govers, Gerard

    2016-04-01

    Meteoric 10Be allows for the quantification of vertical and lateral soil fluxes over long time scales (103-105 yr). However, the mobility of meteoric 10Be in the soil system makes a translation of meteoric 10Be inventories into erosion and deposition rates complex. Here, we present a spatially explicit 2D model simulating the behaviour of meteoric 10Be on a hillslope. The model consists of two parts. The first component deals with advective and diffusive mobility of meteoric 10Be within the soil profile, and the second component describes lateral soil and meteoric 10Be fluxes over the hillslope. Soil depth is calculated dynamically, accounting for soil production through weathering as well as downslope fluxes of soil due to creep, water and tillage erosion. Synthetic model simulations show that meteoric 10Be inventories can be related to erosion and deposition across a wide range of geomorphological and pedological settings. Our results also show that meteoric 10Be can be used as a tracer to detect human impact on soil fluxes for soils with a high affinity for meteoric 10Be. However, the quantification of vertical mobility is essential for a correct interpretation of the observed variations in meteoric 10Be profiles and inventories. Application of the Be2D model to natural conditions using data sets from the Southern Piedmont (Bacon et al., 2012) and Appalachian Mountains (Jungers et al., 2009; West et al., 2013) allows to reliably constrain parameter values. Good agreement between simulated and observed meteoric 10Be concentrations and inventories is obtained with realistic parameter values. Furthermore, our results provide detailed insights into the processes redistributing meteoric 10Be at the soil-hillslope scale.

  3. Simulations of the C-2/C-2U Field Reversed Configurations with the Q2D code

    NASA Astrophysics Data System (ADS)

    Onofri, Marco; Dettrick, Sean; Barnes, Daniel; Tajima, Toshiki; TAE Team

    2015-11-01

    C-2U was built to sustain advanced beam-driven FRCs for 5 + ms. The Q2D transport code is used to simulate the evolution of C-2U discharges and to study sustainment via fast ion current and pressure, with the latter comparable to the thermal plasma pressure. The code solves the MHD equations together with source terms due to neutral beams, which are calculated by a Monte Carlo method. We compare simulations with experimental results obtained in the HPF14 regime of C-2 (6 neutral beams with energy of 20 keV and total power of 4.2 MW). All simulations start from an initial equilibrium and transport coefficients are chosen to match experimental data. The best agreement is obtained when utilizing an enhanced energy transfer between fast ions and the plasma, which may be an indication of anomalous heating due to beneficial beam-plasma instabilities. Similar simulations of C-2U (neutral beam power increased to 10 + MW and angled beam injection) are compared with experimental results, where a steady state has been obtained for 5 + ms, correlated with the neutral beam pulse and limited by engineering constraints.

  4. Optimal time step for incompressible SPH

    NASA Astrophysics Data System (ADS)

    Violeau, Damien; Leroy, Agnès

    2015-05-01

    A classical incompressible algorithm for Smoothed Particle Hydrodynamics (ISPH) is analyzed in terms of critical time step for numerical stability. For this purpose, a theoretical linear stability analysis is conducted for unbounded homogeneous flows, leading to an analytical formula for the maximum CFL (Courant-Friedrichs-Lewy) number as a function of the Fourier number. This gives the maximum time step as a function of the fluid viscosity, the flow velocity scale and the SPH discretization size (kernel standard deviation). Importantly, the maximum CFL number at large Reynolds number appears twice smaller than with the traditional Weakly Compressible (WCSPH) approach. As a consequence, the optimal time step for ISPH is only five times larger than with WCSPH. The theory agrees very well with numerical data for two usual kernels in a 2-D periodic flow. On the other hand, numerical experiments in a plane Poiseuille flow show that the theory overestimates the maximum allowed time step for small Reynolds numbers.

  5. Initial data for general relativistic SPH

    NASA Astrophysics Data System (ADS)

    Pérez, J. P. Cruz; Cervera, J. A. González

    2013-07-01

    The initial data generation in numerical simulations is an important issue for numerical methods. In particular in Smoothed Particle Hydrodynamic (SPH), acceptance-rejection method is one of the most frequently used for generating the position of the nodes. In this work we present the transformation law of probabilities as an alternative method for density profiles distributed spherically. As a physical application we generate a distribution of data for a density profile in steady-state accretion around a Schwarzschild black hole showing the convergence of the method.

  6. FireStem2D--a two-dimensional heat transfer model for simulating tree stem injury in fires.

    PubMed

    Chatziefstratiou, Efthalia K; Bohrer, Gil; Bova, Anthony S; Subramanian, Ravishankar; Frasson, Renato P M; Scherzer, Amy; Butler, Bret W; Dickinson, Matthew B

    2013-01-01

    FireStem2D, a software tool for predicting tree stem heating and injury in forest fires, is a physically-based, two-dimensional model of stem thermodynamics that results from heating at the bark surface. It builds on an earlier one-dimensional model (FireStem) and provides improved capabilities for predicting fire-induced mortality and injury before a fire occurs by resolving stem moisture loss, temperatures through the stem, degree of bark charring, and necrotic depth around the stem. We present the results of numerical parameterization and model evaluation experiments for FireStem2D that simulate laboratory stem-heating experiments of 52 tree sections from 25 trees. We also conducted a set of virtual sensitivity analysis experiments to test the effects of unevenness of heating around the stem and with aboveground height using data from two studies: a low-intensity surface fire and a more intense crown fire. The model allows for improved understanding and prediction of the effects of wildland fire on injury and mortality of trees of different species and sizes.

  7. FireStem2D – A Two-Dimensional Heat Transfer Model for Simulating Tree Stem Injury in Fires

    PubMed Central

    Chatziefstratiou, Efthalia K.; Bohrer, Gil; Bova, Anthony S.; Subramanian, Ravishankar; Frasson, Renato P. M.; Scherzer, Amy; Butler, Bret W.; Dickinson, Matthew B.

    2013-01-01

    FireStem2D, a software tool for predicting tree stem heating and injury in forest fires, is a physically-based, two-dimensional model of stem thermodynamics that results from heating at the bark surface. It builds on an earlier one-dimensional model (FireStem) and provides improved capabilities for predicting fire-induced mortality and injury before a fire occurs by resolving stem moisture loss, temperatures through the stem, degree of bark charring, and necrotic depth around the stem. We present the results of numerical parameterization and model evaluation experiments for FireStem2D that simulate laboratory stem-heating experiments of 52 tree sections from 25 trees. We also conducted a set of virtual sensitivity analysis experiments to test the effects of unevenness of heating around the stem and with aboveground height using data from two studies: a low-intensity surface fire and a more intense crown fire. The model allows for improved understanding and prediction of the effects of wildland fire on injury and mortality of trees of different species and sizes. PMID:23894599

  8. Modelling multi-phase liquid-sediment scour and resuspension induced by rapid flows using Smoothed Particle Hydrodynamics (SPH) accelerated with a Graphics Processing Unit (GPU)

    NASA Astrophysics Data System (ADS)

    Fourtakas, G.; Rogers, B. D.

    2016-06-01

    A two-phase numerical model using Smoothed Particle Hydrodynamics (SPH) is applied to two-phase liquid-sediments flows. The absence of a mesh in SPH is ideal for interfacial and highly non-linear flows with changing fragmentation of the interface, mixing and resuspension. The rheology of sediment induced under rapid flows undergoes several states which are only partially described by previous research in SPH. This paper attempts to bridge the gap between the geotechnics, non-Newtonian and Newtonian flows by proposing a model that combines the yielding, shear and suspension layer which are needed to predict accurately the global erosion phenomena, from a hydrodynamics prospective. The numerical SPH scheme is based on the explicit treatment of both phases using Newtonian and the non-Newtonian Bingham-type Herschel-Bulkley-Papanastasiou constitutive model. This is supplemented by the Drucker-Prager yield criterion to predict the onset of yielding of the sediment surface and a concentration suspension model. The multi-phase model has been compared with experimental and 2-D reference numerical models for scour following a dry-bed dam break yielding satisfactory results and improvements over well-known SPH multi-phase models. With 3-D simulations requiring a large number of particles, the code is accelerated with a graphics processing unit (GPU) in the open-source DualSPHysics code. The implementation and optimisation of the code achieved a speed up of x58 over an optimised single thread serial code. A 3-D dam break over a non-cohesive erodible bed simulation with over 4 million particles yields close agreement with experimental scour and water surface profiles.

  9. MONTE GENEROSO ROCKFALL FIELD TEST (SWITZERLAND): Real size experiment to constraint 2D and 3D rockfall simulations

    NASA Astrophysics Data System (ADS)

    Humair, F.; Matasci, B.; Carrea, D.; Pedrazzini, A.; Loye, A.; Pedrozzi, G.; Nicolet, P.; Jaboyedoff, M.

    2012-04-01

    account the results of the experimental testing are performed and compared with the a-priori simulations. 3D simulations were performed using a software that takes into account the effect of the forest cover in the blocky trajectory (RockyFor 3D) and an other that neglects this aspect (Rotomap; geo&soft international). 2D simulation (RocFall; Rocscience) profiles were located in the blocks paths deduced from 3D simulations. The preliminary results show that: (1) high speed movies are promising and allow us to track the blocks using video software, (2) the a-priori simulations tend to overestimate the runout distance which is certainly due to an underestimation of the obstacles as well as the breaking of the failing rocks which is not taken into account in the models, (3) the trajectories deduced from both a-priori simulation and real size experiment highlights the major influence of the channelized slope morphology on rock paths as it tends to follow the flow direction. This indicates that the 2D simulation have to be performed along the line of flow direction.

  10. Analysis of Highly-Resolved Simulations of 2-D Humps Toward Improvement of Second-Moment Closures

    NASA Technical Reports Server (NTRS)

    Jeyapaul, Elbert; Rumsey Christopher

    2013-01-01

    Fully resolved simulation data of flow separation over 2-D humps has been used to analyze the modeling terms in second-moment closures of the Reynolds-averaged Navier- Stokes equations. Existing models for the pressure-strain and dissipation terms have been analyzed using a priori calculations. All pressure-strain models are incorrect in the high-strain region near separation, although a better match is observed downstream, well into the separated-flow region. Near-wall inhomogeneity causes pressure-strain models to predict incorrect signs for the normal components close to the wall. In a posteriori computations, full Reynolds stress and explicit algebraic Reynolds stress models predict the separation point with varying degrees of success. However, as with one- and two-equation models, the separation bubble size is invariably over-predicted.

  11. Investigating the outcomes of SPH models of catastrophic destruction

    NASA Astrophysics Data System (ADS)

    Dell'Oro, A.; Cellino, A.; Paolicchi, P.; Tanga, P.

    Smooth particle hydro-dynamics (SPH) codes have proved able to simulate satisfactorily the shattering processes in high-energy collisions among asteroids, reproducing the major observational evidences. In particular, SPH models reproduce fairly well the size distributions of the members of some asteroid families. A considerable difference between SPH models and Semi-Empirical Models (SEM) is that in the former the asteroids are ground up into very small fragments, the size of which is limited by the resolution of the code. Moreover, the subsequent ballistic dynamical evolution, driven by their mutual gravitational attraction, would result in a significant re-accumulation into many bodies. On the contrary, ejection velocity fields predicted by SEM allow the reaccumulation into very few bodies, sometimes only the largest remnant. This difference is a critical issue for the interpretation of the observational data in order to understand the physics of the catastrophic destruction process, and the physical characteristics of the asteroids themselves. We present a new analysis of some SPH velocity fields aiming to shed light on the intrinsic differences between SPH models and SEMs.

  12. Simulation of picloram, atrazine, and simazine leaching through two New Zealand soils and into groundwater using HYDRUS-2D

    NASA Astrophysics Data System (ADS)

    Pang, Liping; Close, Murray E.; Watt, James P. C.; Vincent, Keith W.

    2000-06-01

    Two 15 m×15 m field plots, a Te Awa silt loam and a Twyford fine sandy loam, located in Hawkes Bay, New Zealand, were applied with bromide, picloram, atrazine, and simazine. The Te Awa subsoil was a heterogeneous coarse sand and sandy gravel, and the Twyford subsoil was a more homogenous fine sandy loam. The underlying aquifers were composed of alluvial gravels at both sites with the water tables generally between 4-5 m below ground level. The sites were monitored for 2.2-3.5 years at approximately monthly intervals using suction cups in the unsaturated zone and monitoring wells in groundwater. HYDRUS-2D was used to simulate water movement and solute transport in soil and groundwater in a domain with a depth of 10 m and length of 68 m, including a 4.5-m unsaturated zone. The model simulated well the general trend of field observations for soil water content ( θ) and potential ( ψs), and the values matched better for the soils with less heterogeneity. For the soils with significant surface cracks, the simulated θ values were overestimated. On the other hand, for the soil layer perching on top of a less permeable layer, the simulated θ values were underestimated. Simulated pesticide concentrations using the "best available literature values" (BALVs) of organic carbon distribution coefficient ( Koc) and half-life ( T1/2) were generally lower than those observed. At early times in the trails, most simulations using BALVs were still within the same order of magnitude as observed concentrations for the shallow depths. However, at greater depths and later times, there were major differences between observed and simulated concentrations. The model was then calibrated for Koc and T1/2 values using observed data with an aid of the PEST optimisation package. Despite higher organic contents found in the topsoil, optimised Koc values for pesticides were consistently lower for the topsoil than for the subsoil, and were also lower than the BALVs except for picloram, possibly

  13. Continuum modeling of rate-dependent granular flows in SPH

    NASA Astrophysics Data System (ADS)

    Hurley, Ryan C.; Andrade, José E.

    2016-09-01

    We discuss a constitutive law for modeling rate-dependent granular flows that has been implemented in smoothed particle hydrodynamics (SPH). We model granular materials using a viscoplastic constitutive law that produces a Drucker-Prager-like yield condition in the limit of vanishing flow. A friction law for non-steady flows, incorporating rate-dependence and dilation, is derived and implemented within the constitutive law. We compare our SPH simulations with experimental data, demonstrating that they can capture both steady and non-steady dynamic flow behavior, notably including transient column collapse profiles. This technique may therefore be attractive for modeling the time-dependent evolution of natural and industrial flows.

  14. Au36(SPh)23 nanomolecules.

    PubMed

    Nimmala, Praneeth Reddy; Dass, Amala

    2011-06-22

    A new core size protected completely by an aromatic thiol, Au(36)(SPh)(23), is synthesized and characterized by MALDI-TOF mass spectrometry and UV-visible spectroscopy. The synthesis involving core size changes is studied by MS, and the complete ligand coverage by aromatic thiol group is shown by NMR.

  15. Towards consistence and convergence of conservative SPH approximations

    NASA Astrophysics Data System (ADS)

    Litvinov, S.; Hu, X. Y.; Adams, N. A.

    2015-11-01

    Typical conservative smoothed particle hydrodynamics (SPH) approximations of the gradient of a scalar field introduce two errors: one (smoothing error) is due to smoothing of the gradient by an integration associated with a kernel function; the other (integration error) is due to approximating the integration by summation over all particles within the kernel support. When particles are not on a uniform grid, the integration error leads to violation of zero-order consistency, i.e. the inability to reproduce a constant field. In this paper we confirm that partition of unity is the condition under which the conservative SPH approximation achieves both consistence and convergence. We show that this condition can be achieved by relaxing a particle distribution under a constant pressure field and invariant particle volume. The resulting particle distribution is very similar to that is typical for liquid molecules. We further show that with two different typical kernel functions the SPH approximation, upon satisfying the partition of unity property, is able to achieve very high-order of the integration error, which previously could be shown only with particles on a uniform grid. The background pressure used in a weakly compressible SPH simulation implies a self-relaxation mechanism, which explains that convergence with respect to increasing particle numbers could be obtained in SPH simulations, although not predicted by previous numerical analysis. Furthermore, by relating the integration error to the background pressure, we explain why the previously proposed transport-velocity formulation of SPH (S. Adami et al. (2013) [1]) is able to achieve unprecedented accuracy and stability.

  16. Simulating Dynamic Stall in a 2D VAWT: Modeling strategy, verification and validation with Particle Image Velocimetry data

    NASA Astrophysics Data System (ADS)

    Simão Ferreira, C. J.; Bijl, H.; van Bussel, G.; van Kuik, G.

    2007-07-01

    The implementation of wind energy conversion systems in the built environment renewed the interest and the research on Vertical Axis Wind Turbines (VAWT), which in this application present several advantages over Horizontal Axis Wind Turbines (HAWT). The VAWT has an inherent unsteady aerodynamic behavior due to the variation of angle of attack with the angle of rotation, perceived velocity and consequentially Reynolds number. The phenomenon of dynamic stall is then an intrinsic effect of the operation of a Vertical Axis Wind Turbine at low tip speed ratios, having a significant impact in both loads and power. The complexity of the unsteady aerodynamics of the VAWT makes it extremely attractive to be analyzed using Computational Fluid Dynamics (CFD) models, where an approximation of the continuity and momentum equations of the Navier-Stokes equations set is solved. The complexity of the problem and the need for new design approaches for VAWT for the built environment has driven the authors of this work to focus the research of CFD modeling of VAWT on: •comparing the results between commonly used turbulence models: URANS (Spalart-Allmaras and k-epsilon) and large eddy models (Large Eddy Simulation and Detached Eddy Simulation) •verifying the sensitivity of the model to its grid refinement (space and time), •evaluating the suitability of using Particle Image Velocimetry (PIV) experimental data for model validation. The 2D model created represents the middle section of a single bladed VAWT with infinite aspect ratio. The model simulates the experimental work of flow field measurement using Particle Image Velocimetry by Simão Ferreira et al for a single bladed VAWT. The results show the suitability of the PIV data for the validation of the model, the need for accurate simulation of the large eddies and the sensitivity of the model to grid refinement.

  17. PC2D simulation and optimization of the selective emitter solar cells fabricated by screen printing phosphoric paste method

    NASA Astrophysics Data System (ADS)

    Jia, Xiaojie; Ai, Bin; Deng, Youjun; Xu, Xinxiang; Peng, Hua; Shen, Hui

    2015-08-01

    On the basis of perfect PC2D simulation to the measured current density vs voltage (J-V) curve of the best selective emitter (SE) solar cell fabricated by the CSG Company using the screen printing phosphoric paste method, we systematically investigated the effect of the parameters of gridline, base, selective emitter, back surface field (BSF) layer and surface recombination rate on performance of the SE solar cell. Among these parameters, we identified that the base minority carrier lifetime, the front and back surface recombination rate and the ratio of the sheet-resistance of heavily and lightly doped region are the four largest efficiency-affecting factors. If all the parameters have ideal values, the SE solar cell fabricated on a p-type monocrystalline silicon wafer can even obtain the efficiency of 20.45%. In addition, the simulation also shows that fine gridline combining dense gridline and increasing bus bar number while keeping the lower area ratio can offer the other ways to improve the efficiency.

  18. 2D simulation of active species and ozone production in a multi-tip DC air corona discharge

    NASA Astrophysics Data System (ADS)

    Meziane, M.; Eichwald, O.; Sarrette, J. P.; Ducasse, O.; Yousfi, M.

    2011-11-01

    The present paper shows for the first time in the literature a complete 2D simulation of the ozone production in a DC positive multi-tip to plane corona discharge reactor crossed by a dry air flow at atmospheric pressure. The simulation is undertaken until 1 ms and involves tens of successive discharge and post-discharge phases. The air flow is stressed by several monofilament corona discharges generated by a maximum of four anodic tips distributed along the reactor. The nonstationary hydrodynamics model for reactive gas mixture is solved using the commercial FLUENT software. During each discharge phase, thermal and vibrational energies as well as densities of radical and metastable excited species are locally injected as source terms in the gas medium surrounding each tip. The chosen chemical model involves 10 neutral species reacting following 24 reactions. The obtained results allow us to follow the cartography of the temperature and the ozone production inside the corona reactor as a function of the number of high voltage anodic tips.

  19. Long term 2D gravel-bed river morphodynamics simulations using morphological factor: are final configurations always reliable?

    NASA Astrophysics Data System (ADS)

    Vanzo, Davide; Siviglia, Annunziato; Zolezzi, Guido

    2014-05-01

    In last decades, pushed by an increasing interest in environmental problems and supported by an exponential growth of computational capability, novel numerical methods and models have been developed. Despite the progress in parallel computing, computational time is still one of the main bottlenecks when dealing with long term environmental simulations. To overcome such time constraint in morphodynamic models, artificial acceleration of bed evolution has been implemented with different strategies (e.g. Roelvink 2006). The key idea is to accelerate the morphological evolution increasing the discrete bottom variations of a given "morphological factor" during numerical integration thus considerably speeding up computational time. On the other hand, an artificial alteration of the governing equations is put forward, for which related numerical and physical consequences are not completely known. The present work investigates the role of the morphological factor in numerical simulations of a well-defined, 2D reach-scale process in river morphodynamics, which can be taken as a benchmark for the established knowledge made available from theoretical and physical scale models developed in the past decades. The chosen process is the evolution of free migrating bars in a straight channel. The numerical morphodynamic model used in this work is GIAMT2D (Siviglia et al. 2013), which solves the governing system of shallow water and Exner equations following a fully coupled approach with a finite volume method on unstructured triangular grids. By processing numerical outcomes also through Continuous Wavelet Transform, the differences in free migrating bars properties (temporal evolution and equilibrium values of wavelength, amplitude, celerity) are investigated in simple test cases with different values of the morphological factor. Numerical results are compared with available analytical theories for free bars. The outcomes highlight the consequences of using the morphological

  20. Frequency distribution of the amide-I vibration sorted by residues in Amyloid fibrils revealed by 2D-IR measurements and simulations

    PubMed Central

    Falvo, Cyril; Zhuang, Wei; Kim, Yung Sam; Axelsen, Paul H.; Hochstrasser, Robin M.; Mukamel, Shaul

    2012-01-01

    The infrared optical response of Amyloid Fibrils Aβ1–40 is investigated. Simulations of two models corresponding to different protonation states are compared with experiment. The simulations reveal that vibrational frequency distributions inside the fibrils are dominated by sidechain fluctuations. We further confirm earlier suggestions based on 2D-IR measurements that water molecules can be trapped inside the fibrils. PMID:22338639

  1. Interaction Between Tropical Convection and its Embedding Environment: An Energetics Analysis of a 2-D Cloud Resolving Simulation

    NASA Technical Reports Server (NTRS)

    Li, Xiaofan; Sui, C.-H.; Lau, K.-M.

    1999-01-01

    The phase relation between the perturbation kinetic energy (K') associated with the tropical convection and the horizontal-mean moist available potential energy (bar-P) associated with environmental conditions is investigated by an energetics analysis of a numerical experiment. This experiment is performed using a 2-D cloud resolving model forced by the TOGA-COARE derived vertical velocity. The imposed upward motion leads to a decrease of bar-P directly through the associated vertical advective cooling, and to an increase of K' directly through cloud related processes, feeding the convection. The maximum K' and its maximum growth rate lags and leads, respectively, the maximum imposed large-scale upward motion by about 1-2 hours, indicating that convection is phase locked with large-scale forcing. The dominant life cycle of the simulated convection is about 9 hours, whereas the time scales of the imposed large-scale forcing are longer than the diurnal cycle. In the convective events, maximum growth of K' leads maximum decay of the perturbation moist available potential energy (P') by about 3 hours through vertical heat transport by perturbation circulation, and perturbation cloud heating. Maximum decay of P' leads maximum decay of bar-P by about one hour through the perturbation radiative, processes, the horizontal-mean cloud heating, and the large-scale vertical advective cooling. Therefore, maximum gain of K' occurs about 4-5 hours before maximum decay of bar-P.

  2. A 2-D FEM thermal model to simulate water flow in a porous media: Campi Flegrei caldera case study

    NASA Astrophysics Data System (ADS)

    Romano, V.; Tammaro, U.; Capuano, P.

    2012-05-01

    Volcanic and geothermal aspects both exist in many geologically young areas. In these areas the heat transfer process is of fundamental importance, so that the thermal and fluid-dynamic processes characterizing a viscous fluid in a porous medium are very important to understand the complex dynamics of the these areas. The Campi Flegrei caldera, located west of the city of Naples, within the central-southern sector of the large graben of Campanian plain, is a region where both volcanic and geothermal phenomena are present. The upper part of the geothermal system can be considered roughly as a succession of volcanic porous material (tuff) saturated by a mixture formed mainly by water and carbon dioxide. We have implemented a finite elements approach in transient conditions to simulate water flow in a 2-D porous medium to model the changes of temperature in the geothermal system due to magmatic fluid inflow, accounting for a transient phase, not considered in the analytical solutions and fluid compressibility. The thermal model is described by means of conductive/convective equations, in which we propose a thermal source represented by a parabolic shape function to better simulate an increase of temperature in the central part (magma chamber) of a box, simulating the Campi Flegrei caldera and using more recent evaluations, from literature, for the medium's parameters (specific heat capacity, density, thermal conductivity, permeability). A best-fit velocity for the permeant is evaluated by comparing the simulated temperatures with those measured in wells drilled by Agip (Italian Oil Agency) in the 1980s in the framework of geothermal exploration. A few tens of days are enough to reach the thermal steady state, showing the quick response of the system to heat injection. The increase in the pressure due to the heat transport is then used to compute ground deformation, in particular the vertical displacements characteristics of the Campi Flegrei caldera behaviour. The

  3. TITAN2D simulations of pyroclastic flows at Cerro Machín Volcano, Colombia: Hazard implications

    NASA Astrophysics Data System (ADS)

    Murcia, H. F.; Sheridan, M. F.; Macías, J. L.; Cortés, G. P.

    2010-03-01

    Cerro Machín is a dacitic tuff ring located in the central part of the Colombian Andes. It lies at the southern end of the Cerro Bravo-Cerro Machín volcanic belt. This volcano has experienced at least six major explosive eruptions during the last 5000 years. These eruptions have generated pyroclastic flows associated with Plinian activity that have traveled up to 8 km from the crater, and pyroclastic flows associated with Vulcanian activity with shorter runouts of 5 km from the source. Today, some 21,000 people live within a 8 km radius of Cerro Machín. The volcano is active with fumaroles and has shown increasing seismic activity since 2004, and therefore represents a potentially increasing threat to the local population. To evaluate the possible effects of future eruptions that may generate pyroclastic density currents controlled by granular flow dynamics we performed flow simulations with the TITAN2D code. These simulations were run in all directions around the volcano, using the input parameters of the largest eruption reported. The results show that an eruption of 0.3 km 3 of pyroclastic flows from a collapsing Plinian column would travel up to 9 km from the vent, emplacing a deposit thicker than 60 m within the Toche River valley. Deposits >45 m thick can be expected in the valleys of San Juan, Santa Marta, and Azufral creeks, while 30 m thick deposits could accumulate within the drainages of the Tochecito, Bermellón, and Coello Rivers. A minimum area of 56 km 2 could be affected directly by this kind of eruption. In comparison, Vulcanian column-collapse pyroclastic flows of 0.1 km 3 would travel up to 6 km from the vent depositing >45 m thick debris inside the Toche River valley and more than 30 m inside the valleys of San Juan, Santa Marta, and Azufral creeks. The minimum area that could be affected directly by this kind of eruption is 33 km 2. The distribution and thickness of the deposits obtained by these simulations are consistent with the hazard

  4. The modular approach enables a fully ab initio simulation of the contacts between 3D and 2D materials

    NASA Astrophysics Data System (ADS)

    Fediai, Artem; Ryndyk, Dmitry A.; Cuniberti, Gianaurelio

    2016-10-01

    Up to now, the electrical properties of the contacts between 3D metals and 2D materials have never been computed at a fully ab initio level due to the huge number of atomic orbitals involved in a current path from an electrode to a pristine 2D material. As a result, there are still numerous open questions and controversial theories on the electrical properties of systems with 3D/2D interfaces—for example, the current path and the contact length scalability. Our work provides a first-principles solution to this long-standing problem with the use of the modular approach, a method which rigorously combines a Green function formalism with the density functional theory (DFT) for this particular contact type. The modular approach is a general approach valid for any 3D/2D contact. As an example, we apply it to the most investigated among 3D/2D contacts—metal/graphene contacts—and show its abilities and consistency by comparison with existing experimental data. As it is applicable to any 3D/2D interface, the modular approach allows the engineering of 3D/2D contacts with the pre-defined electrical properties.

  5. The modular approach enables a fully ab initio simulation of the contacts between 3D and 2D materials.

    PubMed

    Fediai, Artem; Ryndyk, Dmitry A; Cuniberti, Gianaurelio

    2016-10-01

    Up to now, the electrical properties of the contacts between 3D metals and 2D materials have never been computed at a fully ab initio level due to the huge number of atomic orbitals involved in a current path from an electrode to a pristine 2D material. As a result, there are still numerous open questions and controversial theories on the electrical properties of systems with 3D/2D interfaces-for example, the current path and the contact length scalability. Our work provides a first-principles solution to this long-standing problem with the use of the modular approach, a method which rigorously combines a Green function formalism with the density functional theory (DFT) for this particular contact type. The modular approach is a general approach valid for any 3D/2D contact. As an example, we apply it to the most investigated among 3D/2D contacts-metal/graphene contacts-and show its abilities and consistency by comparison with existing experimental data. As it is applicable to any 3D/2D interface, the modular approach allows the engineering of 3D/2D contacts with the pre-defined electrical properties.

  6. Synthesis of wavelet envelope in 2-D random media having power-law spectra: comparison with FD simulations

    NASA Astrophysics Data System (ADS)

    Sato, Haruo; Fehler, Michael C.

    2016-10-01

    The envelope broadening and the peak delay of the S-wavelet of a small earthquake with increasing travel distance are results of scattering by random velocity inhomogeneities in the earth medium. As a simple mathematical model, Sato proposed a new stochastic synthesis of the scalar wavelet envelope in 3-D von Kármán type random media when the centre wavenumber of the wavelet is in the power-law spectral range of the random velocity fluctuation. The essential idea is to split the random medium spectrum into two components using the centre wavenumber as a reference: the long-scale (low-wavenumber spectral) component produces the peak delay and the envelope broadening by multiple scattering around the forward direction; the short-scale (high-wavenumber spectral) component attenuates wave amplitude by wide angle scattering. The former is calculated by the Markov approximation based on the parabolic approximation and the latter is calculated by the Born approximation. Here, we extend the theory for the envelope synthesis of a wavelet in 2-D random media, which makes it easy to compare with finite difference (FD) simulation results. The synthetic wavelet envelope is analytically written by using the random medium parameters in the angular frequency domain. For the case that the power spectral density function of the random velocity fluctuation has a steep roll-off at large wavenumbers, the envelope broadening is small and frequency independent, and scattering attenuation is weak. For the case of a small roll-off, however, the envelope broadening is large and increases with frequency, and the scattering attenuation is strong and increases with frequency. As a preliminary study, we compare synthetic wavelet envelopes with the average of FD simulation wavelet envelopes in 50 synthesized random media, which are characterized by the RMS fractional velocity fluctuation ε = 0.05, correlation scale a = 5 km and the background wave velocity V0 = 4 km s-1. We use the radiation

  7. Synthesis of Wavelet Envelope in 2-D Random Media Having Power-Law Spectra: Comparison with FD Simulations

    NASA Astrophysics Data System (ADS)

    Sato, Haruo; Fehler, Michael C.

    2016-07-01

    The envelope broadening and the peak delay of the S-wavelet of a small earthquake with increasing travel distance are results of scattering by random velocity inhomogeneities in the earth medium. As a simple mathematical model, Sato (2016) proposed a new stochastic synthesis of the scalar wavelet envelope in 3-D von Kármán type random media when the center wavenumber of the wavelet is in the power-law spectral range of the random velocity fluctuation. The essential idea is to split the random medium spectrum into two components using the center wavenumber as a reference: the long-scale (low-wavenumber spectral) component produces the peak delay and the envelope broadening by multiple scattering around the forward direction; the short-scale (high-wavenumber spectral) component attenuates wave amplitude by wide angle scattering. The former is calculated by the Markov approximation based on the parabolic approximation and the latter is calculated by the Born approximation. Here, we extend the theory for the envelope synthesis of a wavelet in 2-D random media, which makes it easy to compare with finite difference (FD) simulation results. The synthetic wavelet envelope is analytically written by using the random medium parameters in the angular frequency domain. For the case that the power spectral density function of the random velocity fluctuation has a steep roll-off at large wavenumbers, the envelope broadening is small and frequency independent, and scattering attenuation is weak. For the case of a small roll-off, however, the envelope broadening is large and increases with frequency, and the scattering attenuation is strong and increases with frequency. As a preliminary study, we compare synthetic wavelet envelopes with the average of FD simulation wavelet envelopes in 50 synthesized random media, which are characterized by the RMS fractional velocity fluctuation ε=0.05, correlation scale a =5 km and the background wave velocity V0=4 km/s. We use the radiation

  8. Influence of Transport on Two-Dimensional Model Simulation. Tracer Sensitivity to 2-D Model Transport. 1; Long Lived Tracers

    NASA Technical Reports Server (NTRS)

    Fleming, Eric L.; Jackman, Charles H.; Considine, David B.; Stolarski, Richard S.

    1999-01-01

    In this study, we examine the sensitivity of long lived tracers to changes in the base transport components in our 2-D model. Changes to the strength of the residual circulation in the upper troposphere and stratosphere and changes to the lower stratospheric K(sub zz) had similar effects in that increasing the transport rates decreased the overall stratospheric mean age, and increased the rate of removal of material from the stratosphere. Increasing the stratospheric K(sub yy) increased the mean age due to the greater recycling of air parcels through the middle atmosphere, via the residual circulation, before returning to the troposphere. However, increasing K(sub yy) along with self-consistent increases in the corresponding planetary wave drive, which leads to a stronger residual circulation, more than compensates for the K(sub yy)-effect, and produces significantly younger ages throughout the stratosphere. Simulations with very small tropical stratospheric K(sub yy) decreased the globally averaged age of air by as much as 25% in the middle and upper stratosphere, and resulted in substantially weaker vertical age gradients above 20 km in the extratropics. We found only very small stratospheric tracer sensitivity to the magnitude of the horizontal mixing across the tropopause, and to the strength of the mesospheric gravity wave drag and diffusion used in the model. We also investigated the transport influence on chemically active tracers and found a strong age-tracer correlation, both in concentration and calculated lifetimes. The base model transport gives the most favorable overall comparison with a variety of inert tracer observations, and provides a significant improvement over our previous 1995 model transport. Moderate changes to the base transport were found to provide modest agreement with some of the measurements. Transport scenarios with residence times ranging from moderately shorter to slightly longer relative to the base case simulated N2O lifetimes

  9. SPH non-Newtonian Model for Ice Sheet and Ice Shelf Dynamics

    SciTech Connect

    Tartakovsky, Alexandre M.; Pan, Wenxiao; Monaghan, Joseph J.

    2012-07-07

    We propose a new three-dimensional smoothed particle hydrodynamics (SPH) non-Newtonian model to study coupled ice sheet and ice shelf dynamics. Most existing ice sheet numerical models use a grid-based Eulerian approach, and are usually restricted to shallow ice sheet and ice shelf approximations of the momentum conservation equation. SPH, a fully Lagrangian particle method, solves the full momentum conservation equation. SPH method also allows modeling of free-surface flows, large material deformation, and material fragmentation without employing complex front-tracking schemes, and does not require re-meshing. As a result, SPH codes are highly scalable. Numerical accuracy of the proposed SPH model is first verified by simulating a plane shear flow with a free surface and the propagation of a blob of ice along a horizontal surface. Next, the SPH model is used to investigate the grounding line dynamics of ice sheet/shelf. The steady position of the grounding line, obtained from our SPH simulations, is in good agreement with laboratory observations for a wide range of bedrock slopes, ice-to-fluid density ratios, and flux. We examine the effect of non-Newtonian behavior of ice on the grounding line dynamics. The non-Newtonian constitutive model is based on Glen's law for a creeping flow of a polycrystalline ice. Finally, we investigate the effect of a bedrock geometry on a steady-state position of the grounding line.

  10. Rainfall/runoff simulation with 2D full shallow water equations: Sensitivity analysis and calibration of infiltration parameters

    NASA Astrophysics Data System (ADS)

    Fernández-Pato, Javier; Caviedes-Voullième, Daniel; García-Navarro, Pilar

    2016-05-01

    One of the most difficult issues in the development of hydrologic models is to find a rigorous source of data and specific parameters to a given problem, on a given location that enable reliable calibration. In this paper, a distributed and physically based model (2D Shallow Water Equations) is used for surface flow and runoff calculations in combination with two infiltration laws (Horton and Green-Ampt) for estimating infiltration in a watershed. This technique offers the capability of assigning a local and time-dependent infiltration rate to each computational cell depending on the available surface water, soil type or vegetation. We investigate how the calibration of parameters is affected by transient distributed Shallow Water model and the complexity of the problem. In the first part of this work, we calibrate the infiltration parameters for both Horton and Green-Ampt models under flat ponded soil conditions. Then, by means of synthetic test cases, we perform a space-distributed sensitivity analysis in order to show that this calibration can be significantly affected by the introduction of topography or rainfall. In the second part, parameter calibration for a real catchment is addressed by comparing the numerical simulations with two different sets of experimental data, corresponding to very different events in terms of the rainfall volume. We show that the initial conditions of the catchment and the rainfall pattern have a special relevance in the quality of the adjustment. Hence, it is shown that the topography of the catchment and the storm characteristics affect the calibration of infiltration parameters.

  11. SEMICONDUCTOR DEVICES: Simulation of carrier transport in heterostructures using the 2D self-consistent full-band ensemble Monte Carlo method

    NASA Astrophysics Data System (ADS)

    Kangliang, Wei; Xiaoyan, Liu; Gang, Du; Ruqi, Han

    2010-08-01

    We demonstrate a two-dimensional (2D) full-band ensemble Monte-Carlo simulator for heterostructures, which deals with carrier transport in two different semiconductor materials simultaneously as well as at the boundary by solving self-consistently the 2D Poisson and Boltzmann transport equations (BTE). The infrastructure of this simulator, including the energy bands obtained from the empirical pseudo potential method, various scattering mechanics employed, and the appropriate treatment of the carrier transport at the boundary between two different semiconductor materials, is also described. As verification and calibration, we have performed a simulation on two types of silicon-germanium (Si-Ge) heterojunctions with different doping profiles—the p-p homogeneous type and the n-p inhomogeneous type. The current-voltage characteristics are simulated, and the distributions of potential and carrier density are also plotted, which show the validity of our simulator.

  12. A novel SPH method for sedimentation in a turbulent fluid

    NASA Astrophysics Data System (ADS)

    Kwon, Jihoe; Monaghan, J. J.

    2015-11-01

    A novel method for simulating sedimentation is described and applied to the sedimentation of dust in a turbulent fluid. We assume the dust grains are sufficiently numerous that they may be treated as a fluid and modelled by SPH particles. A different set of SPH particles describes the fluid. The equations of motion are therefore similar to those of Monaghan and Kocharyan [14] with the exception that the sedimentation of dust onto a solid surface is treated as if the surface mimics a sink for the dust fluid. The continuity equation for the dust then contains a sink term that can be modelled in the SPH formulation by allowing the mass of each SPH dust particle to decrease when it is sufficiently close to the boundary. We apply this method both to sedimentation in a nearly static fluid, and to sedimentation in a turbulent fluid. In the latter case we produce the turbulence by both a mechanical stirrer and by a stochastic algorithm. Our results agree very closely with the experiments of Martin and Nokes.

  13. Transfert radiatif numerique pour un code SPH

    NASA Astrophysics Data System (ADS)

    Viau, Joseph Edmour Serge

    2001-03-01

    Le besoin de reproduire la formation d'etoiles par simulations numeriques s'est fait de plus en plus present au cours des 30 dernieres annees. Depuis Larson (1968), les codes de simulations n'ont eu de cesse de s'ameliorer. D'ailleurs, en 1977, Lucy introduit une autre methode de calcul venant concurrencer la methode par grille. Cette nouvelle facon de calculer utilise en effet des points a defaut d'utiliser des grilles, ce qui est une bien meilleure adaptation aux calculs d'un effondrement gravitationnel. Il restait cependant le probleme d'ajouter le transfert radiatif a un tel code. Malgre la proposition de Brookshaw (1984), qui nous montre une formule permettant d'ajouter le transfert radiatif sous la forme SPH tout en evitant la double sommation genante qu'elle implique, aucun code SPH a ce jour ne contient un transfert radiatif satisfaisant. Cette these presente pour la premiere fois un code SPH muni d'un transfert radiatif adequat. Toutes les difficultes ont pu etre surmontees afin d'obtenir finalement le transfert radiatif "vrai" qui survient dans l'effondrement d'un nuage moleculaire. Pour verifier l'integrite de nos resultats, une comparaison avec le nonisothermal test case de Boss & Myhill (1993) nous revele un resultat fort satisfaisant. En plus de suivre fidelement la courbe de l'evolution de la temperature centrale en fonction de la densite centrale, notre code est exempt de toutes les anomalies rencontrees par les codes par grille. Le test du cas de la conduction thermique nous a lui aussi servit a verifier la fiabilite de notre code. La aussi les resultats sont fort satisfaisants. Faisant suite a ces resultats, le code fut utilise dans deux situations reelles de recherche, ce qui nous a permis de demontrer les nombreuses possibilites que nous donne notre nouveau code. Dans un premier temps, nous avons tudie le comportement de la temperature dans un disque d'accretion durant son evolution. Ensuite nous avons refait en partie une experience de Bonnell

  14. Volcanic flood simulation of magma effusion using FLO-2D for drainage of a caldera lake at the Mt. Baekdusan

    NASA Astrophysics Data System (ADS)

    Lee, Khil-Ha; Kim, Sung-Wook; Kim, Sang-Hyun

    2014-05-01

    model, called FLO-2D runs to simulate channel routing downstream to give the maximum water level. Once probable inundation areas are identified by the huge volume of water in the caldera lake, the unique geography, and the limited control capability, a potential hazard assessment can be represented. The study will contribute to build a geohazard map for the decision-makers and practitioners. Keywords: Volcanic flood, Caldera lake, Hazard assessment, Magma effusion Acknowledgement This research was supported by a grant [NEMA-BAEKDUSAN-2012-1-2] from the Volcanic Disaster Preparedness Research Center sponsored by National Emergency Management Agency of Korea.

  15. Allosteric pathway identification through network analysis: from molecular dynamics simulations to interactive 2D and 3D graphs.

    PubMed

    Allain, Ariane; Chauvot de Beauchêne, Isaure; Langenfeld, Florent; Guarracino, Yann; Laine, Elodie; Tchertanov, Luba

    2014-01-01

    Allostery is a universal phenomenon that couples the information induced by a local perturbation (effector) in a protein to spatially distant regulated sites. Such an event can be described in terms of a large scale transmission of information (communication) through a dynamic coupling between structurally rigid (minimally frustrated) and plastic (locally frustrated) clusters of residues. To elaborate a rational description of allosteric coupling, we propose an original approach - MOdular NETwork Analysis (MONETA) - based on the analysis of inter-residue dynamical correlations to localize the propagation of both structural and dynamical effects of a perturbation throughout a protein structure. MONETA uses inter-residue cross-correlations and commute times computed from molecular dynamics simulations and a topological description of a protein to build a modular network representation composed of clusters of residues (dynamic segments) linked together by chains of residues (communication pathways). MONETA provides a brand new direct and simple visualization of protein allosteric communication. A GEPHI module implemented in the MONETA package allows the generation of 2D graphs of the communication network. An interactive PyMOL plugin permits drawing of the communication pathways between chosen protein fragments or residues on a 3D representation. MONETA is a powerful tool for on-the-fly display of communication networks in proteins. We applied MONETA for the analysis of communication pathways (i) between the main regulatory fragments of receptors tyrosine kinases (RTKs), KIT and CSF-1R, in the native and mutated states and (ii) in proteins STAT5 (STAT5a and STAT5b) in the phosphorylated and the unphosphorylated forms. The description of the physical support for allosteric coupling by MONETA allowed a comparison of the mechanisms of (a) constitutive activation induced by equivalent mutations in two RTKs and (b) allosteric regulation in the activated and non

  16. Efficient Neighborhood Search in SPH

    NASA Astrophysics Data System (ADS)

    Cruz Pérez, Juan Pablo; González Cervera, José Antonio

    2013-10-01

    One of the main problems found during the implementation of an N-body algorithm, is its inefficiency when the number of points to evaluate is increased. This is a consequence of the order O(N^2) of these methods. With this in mind, when we use the method of Smoothed Particle Hydrodynamics (SPH), it is necessary to find an algorithm that allows us to make the computation in an efficient way. The method presented in this article is of order O(N) , being more efficient as well as easy to implement, reducing the computing time.

  17. A comparison of SPH schemes for the compressible Euler equations

    NASA Astrophysics Data System (ADS)

    Puri, Kunal; Ramachandran, Prabhu

    2014-01-01

    We review the current state-of-the-art Smoothed Particle Hydrodynamics (SPH) schemes for the compressible Euler equations. We identify three prototypical schemes and apply them to a suite of test problems in one and two dimensions. The schemes are in order, standard SPH with an adaptive density kernel estimation (ADKE) technique introduced Sigalotti et al. (2008) [44], the variational SPH formulation of Price (2012) [33] (referred herein as the MPM scheme) and the Godunov type SPH (GSPH) scheme of Inutsuka (2002) [12]. The tests investigate the accuracy of the inviscid discretizations, shock capturing ability and the particle settling behavior. The schemes are found to produce nearly identical results for the 1D shock tube problems with the MPM and GSPH schemes being the most robust. The ADKE scheme requires parameter values which must be tuned to the problem at hand. We propose an addition of an artificial heating term to the GSPH scheme to eliminate unphysical spikes in the thermal energy at the contact discontinuity. The resulting modification is simple and can be readily incorporated in existing codes. In two dimensions, the differences between the schemes is more evident with the quality of results determined by the particle distribution. In particular, the ADKE scheme shows signs of particle clumping and irregular motion for the 2D strong shock and Sedov point explosion tests. The noise in particle data is linked with the particle distribution which remains regular for the Hamiltonian formulations (MPM and GSPH) and becomes irregular for the ADKE scheme. In the interest of reproducibility, we make available our implementation of the algorithms and test problems discussed in this work.

  18. Tears Rendering in Extreme Expression by Using SPH Method and Gravity Parameters

    NASA Astrophysics Data System (ADS)

    Rahim, Mohd Shafry Mohd; Rad, Abdolvahab Ehsani; Rehman, Amjad; Altameem, Ayman

    2014-06-01

    The simulation of fluid generation and the Smooth Particle Hydrodynamic (SPH) method has been discussed as an explanation for extreme expression, followed by tears simulation which includes creating tears using SPH and tears effect rendering. Furthermore, the testing and the evaluation for creating tears simulation with different effects and cases were applied. Accordingly, this paper explains how to control the crying with the facial animation expressions which are used to simulate the extreme expressions. Additionally, the results of various aspects of this study and the different kinds of crying were simulated and explained. Finally, the measurements of frame rates for different parts of tears simulation by using Fraps software have been explored.

  19. SIMULATIONS OF 2D AND 3D THERMOCAPILLARY FLOWS BY A LEAST-SQUARES FINITE ELEMENT METHOD. (R825200)

    EPA Science Inventory

    Numerical results for time-dependent 2D and 3D thermocapillary flows are presented in this work. The numerical algorithm is based on the Crank-Nicolson scheme for time integration, Newton's method for linearization, and a least-squares finite element method, together with a matri...

  20. Efficient high-quality volume rendering of SPH data.

    PubMed

    Fraedrich, Roland; Auer, Stefan; Westermann, Rüdiger

    2010-01-01

    High quality volume rendering of SPH data requires a complex order-dependent resampling of particle quantities along the view rays. In this paper we present an efficient approach to perform this task using a novel view-space discretization of the simulation domain. Our method draws upon recent work on GPU-based particle voxelization for the efficient resampling of particles into uniform grids. We propose a new technique that leverages a perspective grid to adaptively discretize the view-volume, giving rise to a continuous level-of-detail sampling structure and reducing memory requirements compared to a uniform grid. In combination with a level-of-detail representation of the particle set, the perspective grid allows effectively reducing the amount of primitives to be processed at run-time. We demonstrate the quality and performance of our method for the rendering of fluid and gas dynamics SPH simulations consisting of many millions of particles.

  1. Hourglass control for Smooth Particle Hydrodynamics removes tensile and rank-deficiency instabilities. Hourglass control for SPH

    NASA Astrophysics Data System (ADS)

    Ganzenmüller, G. C.; Sauer, M.; May, M.; Hiermaier, S.

    2016-05-01

    We present a stabilization scheme for elastoplastic Smooth-Particle Hydrodynamics (SPH) which overcomes two major challenges: (i) the tensile instability inherent to the updated Lagrangian approach is suppressed and (ii) the rank-deficiency instability inherent to the nodal integration approach is cured. To achieve these goals, lessons learned from the Finite-Element Method are transferred to SPH. In particular, an analogue of hourglass control is derived for SPH, which locally linearizes the deformation field to obtain stable and accurate solutions, without the need to resort to stabilization via excessive artificial viscosity. The resulting SPH scheme combines the ability of updated Lagrangian SPH to model truly large deformations with the accuracy and stability needed to faithfully perform simulations. This claim is supported by the analysis of problematic cases and the simulation of an impact scenario.

  2. A parallel TreeSPH code for galaxy formation

    NASA Astrophysics Data System (ADS)

    Lia, Cesario; Carraro, Giovanni

    2000-05-01

    We describe a new implementation of a parallel TreeSPH code with the aim of simulating galaxy formation and evolution. The code has been parallelized using shmem, a Cray proprietary library to handle communications between the 256 processors of the Silicon Graphics T3E massively parallel supercomputer hosted by the Cineca Super-computing Center (Bologna, Italy).1 The code combines the smoothed particle hydrodynamics (SPH) method for solving hydrodynamical equations with the popular Barnes & Hut tree-code to perform gravity calculation with an N×logN scaling, and it is based on the scalar TreeSPH code developed by Carraro et al. Parallelization is achieved by distributing particles along processors according to a workload criterion. Benchmarks, in terms of load balance and scalability, of the code are analysed and critically discussed against the adiabatic collapse of an isothermal gas sphere test using 2×104 particles on 8 processors. The code results balance at more than the 95per cent level. Increasing the number of processors, the load balance slightly worsens. The deviation from perfect scalability for increasing number of processors is almost negligible up to 32 processors. Finally, we present a simulation of the formation of an X-ray galaxy cluster in a flat cold dark matter cosmology, using 2×105 particles and 32 processors, and compare our results with Evrard's P3M-SPH simulations. Additionally we have incorporated radiative cooling, star formation, feedback from SNe of types II and Ia, stellar winds and UV flux from massive stars, and an algorithm to follow the chemical enrichment of the interstellar medium. Simulations with some of these ingredients are also presented.

  3. Complex fluid flow modeling with SPH on GPU

    NASA Astrophysics Data System (ADS)

    Bilotta, Giuseppe; Hérault, Alexis; Del Negro, Ciro; Russo, Giovanni; Vicari, Annamaria

    2010-05-01

    We describe an implementation of the Smoothed Particle Hydrodynamics (SPH) method for the simulation of complex fluid flows. The algorithm is entirely executed on Graphic Processing Units (GPUs) using the Compute Unified Device Architecture (CUDA) developed by NVIDIA and fully exploiting their computational power. An increase of one to two orders of magnitude in simulation speed over equivalent CPU code is achieved. A complete modeling of the flow of a complex fluid such as lava is challenging from the modelistic, numerical and computational points of view. The natural topography irregularities, the dynamic free boundaries and phenomena such as solidification, presence of floating solid bodies or other obstacles and their eventual fragmentation make the problem difficult to solve using traditional numerical methods (finite volumes, finite elements): the need to refine the discretization grid in correspondence of high gradients, when possible, is computationally expensive and with an often inadequate control of the error; for real-world applications, moreover, the information needed by the grid refinement may not be available (e.g. because the Digital Elevation Models are too coarse); boundary tracking is also problematic with Eulerian discretizations, more so with complex fluids due to the presence of internal boundaries given by fluid inhomogeneity and presence of solidification fronts. An alternative approach is offered by mesh-free particle methods, that solve most of the problems connected to the dynamics of complex fluids in a natural way. Particle methods discretize the fluid using nodes which are not forced on a given topological structure: boundary treatment is therefore implicit and automatic; the movement freedom of the particles also permits the treatment of deformations without incurring in any significant penalty; finally, the accuracy is easily controlled by the insertion of new particles where needed. Our team has developed a new model based on the

  4. Precipitation Processes developed during ARM (1997), TOGA COARE(1992), GATE(1 974), SCSMEX(1998) and KWAJEX(1999): Consistent 2D and 3D Cloud Resolving Model Simulations

    NASA Technical Reports Server (NTRS)

    Tao, W.-K.; Shie, C.-H.; Simpson, J.; Starr, D.; Johnson, D.; Sud, Y.

    2003-01-01

    Real clouds and clouds systems are inherently three dimensional (3D). Because of the limitations in computer resources, however, most cloud-resolving models (CRMs) today are still two-dimensional (2D). A few 3D CRMs have been used to study the response of clouds to large-scale forcing. In these 3D simulations, the model domain was small, and the integration time was 6 hours. Only recently have 3D experiments been performed for multi-day periods for tropical cloud system with large horizontal domains at the National Center for Atmospheric Research. The results indicate that surface precipitation and latent heating profiles are very similar between the 2D and 3D simulations of these same cases. The reason for the strong similarity between the 2D and 3D CRM simulations is that the observed large-scale advective tendencies of potential temperature, water vapor mixing ratio, and horizontal momentum were used as the main forcing in both the 2D and 3D models. Interestingly, the 2D and 3D versions of the CRM used in CSU and U.K. Met Office showed significant differences in the rainfall and cloud statistics for three ARM cases. The major objectives of this project are to calculate and axamine: (1)the surface energy and water budgets, (2) the precipitation processes in the convective and stratiform regions, (3) the cloud upward and downward mass fluxes in the convective and stratiform regions; (4) cloud characteristics such as size, updraft intensity and lifetime, and (5) the entrainment and detrainment rates associated with clouds and cloud systems that developed in TOGA COARE, GATE, SCSMEX, ARM and KWAJEX. Of special note is that the analyzed (model generated) data sets are all produced by the same current version of the GCE model, i.e. consistent model physics and configurations. Trajectory analyse and inert tracer calculation will be conducted to identify the differences and similarities in the organization of convection between simulated 2D and 3D cloud systems.

  5. Investigation of enhanced 2D field-stitching method as a simulation-tool for line-edge roughness in scatterometry

    NASA Astrophysics Data System (ADS)

    Bilski, Bartosz; Frenner, Karsten; Osten, Wolfgang

    2010-05-01

    Scatterometry is a method commonly used in semiconductor metrology for measuring critical dimension (CD). It relies on measurement of light diffracted on a periodic structure and using it to derive the actual profile by running complex simulations. As CD is getting smaller with next lithography nodes, the Line-Edge Roughness/Line Width Roughness (LER/LWR) are becoming significant fraction of its overall size - therefore there is a need to include them in the simulations. Simulation of the LER/LWR's influence, in its random nature, calls for simulating relatively large fields. These large fields, if treated with rigorous electromagnetic simulations, are either very time-extensive or impossible to conduct, therefore computationally bearable, approximate approach needs to be applied. Our approximate method is "Field-Stitching Method" (FSM). We present its 2D version with varying parameter called "overlap region". We simulate the line grating structure with CD disturbed by LER/LWR and apply Rigorous Coupled Wave Analysis (RCWA) supported by the 2D FSM. We also generate the results obtained exclusively by RCWA, to which we compare the results of the approximate approach. Based on the comparison we discuss the benefits FSM brings and its limitations.

  6. Simulation using HYDRUS-2D for Soil Water and Heat Transfer under Drip Irrigation with 95oC Hot Water

    NASA Astrophysics Data System (ADS)

    Ito, Y.; Noborio, K.

    2015-12-01

    In Japan, soil disinfection with hot water has been popular since the use of methyl bromide was restricted in 2005. Decreasing the amount of hot water applied may make farmers reduce the operation cost. To determine the appropriate amount of hot water needed for soil disinfection, HYDRUS-2D was evaluated. A field experiment was conducted and soil water content and soil temperature were measured at 5, 10, 20, 40, 60, 80 and 100 cm deep when 95oC hot water was applied. Irrigation tubing equipped with drippers every 30 cm were laid at the soil surface, z=0 cm. An irrigation rate for each dripper was 0.83 cm min-1 between t=0 and 120 min, and thereafter it was zero. Temperature of irrigation water was 95oC. Total simulation time with HYDRUS-2D was 720 min for a homogeneous soil. A simulating domain was selected as x=60 cm and z=100 cm. A potential evaporation rate was assumed to be 0 cm min-1 because the soil surface was covered with a plastic sheet. The boundary condition at the bottom was free drainage and those of both sides were no-flux conditions. Hydraulic properties and bulk densities measured at each depth were used for simulation. It was assumed that there was no organic matter contained. Soil thermal properties were adopted from previous study and HYDRUS 2D. Simulated temperatures at 5, 10, 20 and 40 cm deep agreed well with those measured although simulated temperatures at 60, 80, and 100 cm deep were overly estimated. Estimates of volumetric water content at 5 cm deep agreed well with measured values. Simulated values at 10 to 100 cm deep were overly estimated by 0.1 to 0.3 (m3 m-3). The deeper the soil became, the more the simulated wetting front lagged behind the measured one. It was speculated that water viscosity estimated smaller at high temperature might attributed to the slower advances of wetting front simulated with HYDRUS 2-D.

  7. The influence of the IMRT QA set-up error on the 2D and 3D gamma evaluation method as obtained by using Monte Carlo simulations

    NASA Astrophysics Data System (ADS)

    Kim, Kyeong-Hyeon; Kim, Dong-Su; Kim, Tae-Ho; Kang, Seong-Hee; Cho, Min-Seok; Suh, Tae Suk

    2015-11-01

    The phantom-alignment error is one of the factors affecting delivery quality assurance (QA) accuracy in intensity-modulated radiation therapy (IMRT). Accordingly, a possibility of inadequate use of spatial information in gamma evaluation may exist for patient-specific IMRT QA. The influence of the phantom-alignment error on gamma evaluation can be demonstrated experimentally by using the gamma passing rate and the gamma value. However, such experimental methods have a limitation regarding the intrinsic verification of the influence of the phantom set-up error because experimentally measuring the phantom-alignment error accurately is impossible. To overcome this limitation, we aimed to verify the effect of the phantom set-up error within the gamma evaluation formula by using a Monte Carlo simulation. Artificial phantom set-up errors were simulated, and the concept of the true point (TP) was used to represent the actual coordinates of the measurement point for the mathematical modeling of these effects on the gamma. Using dose distributions acquired from the Monte Carlo simulation, performed gamma evaluations in 2D and 3D. The results of the gamma evaluations and the dose difference at the TP were classified to verify the degrees of dose reflection at the TP. The 2D and the 3D gamma errors were defined by comparing gamma values between the case of the imposed phantom set-up error and the TP in order to investigate the effect of the set-up error on the gamma value. According to the results for gamma errors, the 3D gamma evaluation reflected the dose at the TP better than the 2D one. Moreover, the gamma passing rates were higher for 3D than for 2D, as is widely known. Thus, the 3D gamma evaluation can increase the precision of patient-specific IMRT QA by applying stringent acceptance criteria and setting a reasonable action level for the 3D gamma passing rate.

  8. Balancing the source terms in a SPH model for solving the shallow water equations

    NASA Astrophysics Data System (ADS)

    Xia, Xilin; Liang, Qiuhua; Pastor, Manuel; Zou, Weilie; Zhuang, Yan-Feng

    2013-09-01

    A shallow flow generally features complex hydrodynamics induced by complicated domain topography and geometry. A numerical scheme with well-balanced flux and source term gradients is therefore essential before a shallow flow model can be applied to simulate real-world problems. The issue of source term balancing has been exhaustively investigated in grid-based numerical approaches, e.g. discontinuous Galerkin finite element methods and finite volume Godunov-type methods. In recent years, a relatively new computational method, smooth particle hydrodynamics (SPH), has started to gain popularity in solving the shallow water equations (SWEs). However, the well-balanced problem has not been fully investigated and resolved in the context of SPH. This work aims to discuss the well-balanced problem caused by a standard SPH discretization to the SWEs with slope source terms and derive a corrected SPH algorithm that is able to preserve the solution of lake at rest. In order to enhance the shock capturing capability of the resulting SPH model, the Monotone Upwind-centered Scheme for Conservation Laws (MUSCL) is also explored and applied to enable Riemann solver based artificial viscosity. The new SPH model is validated against several idealized benchmark tests and a real-world dam-break case and promising results are obtained.

  9. High divergent 2D grating

    NASA Astrophysics Data System (ADS)

    Wang, Jin; Ma, Jianyong; Zhou, Changhe

    2014-11-01

    A 3×3 high divergent 2D-grating with period of 3.842μm at wavelength of 850nm under normal incidence is designed and fabricated in this paper. This high divergent 2D-grating is designed by the vector theory. The Rigorous Coupled Wave Analysis (RCWA) in association with the simulated annealing (SA) is adopted to calculate and optimize this 2D-grating.The properties of this grating are also investigated by the RCWA. The diffraction angles are more than 10 degrees in the whole wavelength band, which are bigger than the traditional 2D-grating. In addition, the small period of grating increases the difficulties of fabrication. So we fabricate the 2D-gratings by direct laser writing (DLW) instead of traditional manufacturing method. Then the method of ICP etching is used to obtain the high divergent 2D-grating.

  10. MODELING HIGH-ENERGY LIGHT CURVES OF THE PSR B1259-63/LS 2883 BINARY BASED ON 3D SPH SIMULATIONS

    SciTech Connect

    Takata, J.; Okazaki, A. T.; Nagataki, S.; Lee, S.-H.; Naito, T.; Kawachi, A.; Mori, M.; Hayasaki, K.; Yamaguchi, M. S.; Owocki, S. P.

    2012-05-01

    Temporal changes of X-ray to very high energy gamma-ray emissions from the pulsar-Be-star binary PSR B1259-63/LS 2883 are studied based on three-dimensional smoothed particle hydrodynamic simulations of pulsar wind interaction with Be-disk and wind. We focus on the periastron passage of the binary and calculate the variation of the synchrotron and inverse-Compton emissions using the simulated shock geometry and pressure distribution of the pulsar wind. The characteristic double-peaked X-ray light curve from observations is reproduced by our simulation under a dense Be-disk condition (base density {approx}10{sup -9} g cm{sup -3}). We interpret the pre- and post-periastron peaks as being due to a significant increase in the conversion efficiency from pulsar spin-down power to the shock-accelerated particle energy at orbital phases when the pulsar crosses the disk before periastron passage, and when the pulsar wind creates a cavity in the disk gas after periastron passage, respectively. On the contrary, in the model TeV light curve, which also shows a double-peak feature, the first peak appears around the periastron phase. The possible effects of cooling processes on the TeV light curve are briefly discussed.

  11. Parallel Tree-SPH: A Tool for Galaxy Formation

    NASA Astrophysics Data System (ADS)

    Lia, C.; Carraro, G.

    We describe a new implementation of a parallel Tree-SPH code with the aim of simulating galaxy formation and evolution. The code has been parallelized using SHMEM, a Cray proprietary library to handle communications between the 256 processors of the Silicon Graphics T3E massively parallel supercomputer hosted by the Cineca Super-computing Center (Bologna, Italy). The code combines the smoothed particle hydrodynamics (SPH) method to solve hydrodynamical equations with the popular Barnes and Hut (1986) tree-code to perform gravity calculation with a N × log N scaling, and it is based on the scalar Tree-SPH code developed by Carraro et al. (1998). Parallelization is achieved by distributing particles along processors according to a workload criterion. Benchmarks of the code, in terms of load balance and scalability, are analysed and critically discussed against the adiabatic collapse of an isothermal gas sphere test using 2 × 10^4 particles on eight processors. The code turns out to be balanced at more than 95% level. If the number of processors is increased, the load balance worsens slightly. The deviation from perfect scalability at increasing number of processors is negligible up to 64 processors. Additionally we have incorporated radiative cooling, star formation, feedback and an algorithm to follow the chemical enrichment of the interstellar medium.

  12. Application of rank-ordered multifractal analysis (ROMA) to intermittent fluctuations in 3D turbulent flows, 2D MHD simulation and solar wind data

    NASA Astrophysics Data System (ADS)

    Wu, C.; Chang, T.

    2010-12-01

    A new method in describing the multifractal characteristics of intermittent events was introduced by Cheng and Wu [Chang T. and Wu C.C., Physical Rev, E77, 045401(R), 2008]. The procedure provides a natural connection between the rank-ordered spectrum and the idea of one-parameter scaling for monofractals. This technique has been demonstrated using results obtained from a 2D MHD simulation. It has also been successfully applied to in-situ solar wind observations [Chang T., Wu, C.C. and Podesta, J., AIP Conf Proc. 1039, 75, 2008], and the broadband electric field oscillations from the auroral zone [Tam, S.W.Y. et al., Physical Rev, E81, 036414, 2010]. We take the next step in this procedure. By using the ROMA spectra and the scaled probability distribution functions (PDFs), raw PDFs can be calculated, which can be compared directly with PDFs from observations or simulation results. In addition to 2D MHD simulation results and in-situ solar wind observation, we show clearly using the ROMA analysis the multifractal character of the 3D fluid simulation data obtained from the JHU turbulence database cluster at http://turbulence.pha.jhu.edu. In particular, we show the scaling of the non-symmetrical PDF for the parallel-velocity fluctuations of this 3D fluid data.

  13. Density estimators in particle hydrodynamics. DTFE versus regular SPH

    NASA Astrophysics Data System (ADS)

    Pelupessy, F. I.; Schaap, W. E.; van de Weygaert, R.

    2003-05-01

    We present the results of a study comparing density maps reconstructed by the Delaunay Tessellation Field Estimator (DTFE) and by regular SPH kernel-based techniques. The density maps are constructed from the outcome of an SPH particle hydrodynamics simulation of a multiphase interstellar medium. The comparison between the two methods clearly demonstrates the superior performance of the DTFE with respect to conventional SPH methods, in particular at locations where SPH appears to fail. Filamentary and sheetlike structures form telling examples. The DTFE is a fully self-adaptive technique for reconstructing continuous density fields from discrete particle distributions, and is based upon the corresponding Delaunay tessellation. Its principal asset is its complete independence of arbitrary smoothing functions and parameters specifying the properties of these. As a result it manages to faithfully reproduce the anisotropies of the local particle distribution and through its adaptive and local nature proves to be optimally suited for uncovering the full structural richness in the density distribution. Through the improvement in local density estimates, calculations invoking the DTFE will yield a much better representation of physical processes which depend on density. This will be crucial in the case of feedback processes, which play a major role in galaxy and star formation. The presented results form an encouraging step towards the application and insertion of the DTFE in astrophysical hydrocodes. We describe an outline for the construction of a particle hydrodynamics code in which the DTFE replaces kernel-based methods. Further discussion addresses the issue and possibilities for a moving grid-based hydrocode invoking the DTFE, and Delaunay tessellations, in an attempt to combine the virtues of the Eulerian and Lagrangian approaches.

  14. Meshing Preprocessor for the Mesoscopic 3D Finite Element Simulation of 2D and Interlock Fabric Deformation

    NASA Astrophysics Data System (ADS)

    Wendling, A.; Daniel, J. L.; Hivet, G.; Vidal-Sallé, E.; Boisse, P.

    2015-12-01

    Numerical simulation is a powerful tool to predict the mechanical behavior and the feasibility of composite parts. Among the available numerical approaches, as far as woven reinforced composites are concerned, 3D finite element simulation at the mesoscopic scale leads to a good compromise between realism and complexity. At this scale, the fibrous reinforcement is modeled by an interlacement of yarns assumed to be homogeneous that have to be accurately represented. Among the numerous issues induced by these simulations, the first one consists in providing a representative meshed geometrical model of the unit cell at the mesoscopic scale. The second one consists in enabling a fast data input in the finite element software (contacts definition, boundary conditions, elements reorientation, etc.) so as to obtain results within reasonable time. Based on parameterized 3D CAD modeling tool of unit-cells of dry fabrics already developed, this paper presents an efficient strategy which permits an automated meshing of the models with 3D hexahedral elements and to accelerate of several orders of magnitude the simulation data input. Finally, the overall modeling strategy is illustrated by examples of finite element simulation of the mechanical behavior of fabrics.

  15. Numerical simulations - Some results for the 2- and 3-D Hubbard models and a 2-D electron phonon model

    NASA Technical Reports Server (NTRS)

    Scalapino, D. J.; Sugar, R. L.; White, S. R.; Bickers, N. E.; Scalettar, R. T.

    1989-01-01

    Numerical simulations on the half-filled three-dimensional Hubbard model clearly show the onset of Neel order. Simulations of the two-dimensional electron-phonon Holstein model show the competition between the formation of a Peierls-CDW state and a superconducting state. However, the behavior of the partly filled two-dimensional Hubbard model is more difficult to determine. At half-filling, the antiferromagnetic correlations grow as T is reduced. Doping away from half-filling suppresses these correlations, and it is found that there is a weak attractive pairing interaction in the d-wave channel. However, the strength of the pair field susceptibility is weak at the temperatures and lattice sizes that have been simulated, and the nature of the low-temperature state of the nearly half-filled Hubbard model remains open.

  16. 2D Radiation-hydrodynamic Simulations of Supernova Shock Breakout in Bipolar Explosions of a Blue Supergiant Progenitor

    NASA Astrophysics Data System (ADS)

    Suzuki, Akihiro; Maeda, Keiichi; Shigeyama, Toshikazu

    2016-07-01

    A two-dimensional special relativistic radiation-hydrodynamics code is developed and applied to numerical simulations of supernova shock breakout in bipolar explosions of a blue supergiant. Our calculations successfully simulate the dynamical evolution of a blast wave in the star and its emergence from the surface. Results of the model with spherical energy deposition show a good agreement with previous simulations. Furthermore, we calculate several models with bipolar energy deposition and compare their results with the spherically symmetric model. The bolometric light curves of the shock breakout emission are calculated by a ray-tracing method. Our radiation-hydrodynamic models indicate that the early part of the shock breakout emission can be used to probe the geometry of the blast wave produced as a result of the gravitational collapse of the iron core.

  17. 2D hydrodynamic simulations of a variable length gas target for density down-ramp injection of electrons into a laser wakefield accelerator

    NASA Astrophysics Data System (ADS)

    Kononenko, O.; Lopes, N. C.; Cole, J. M.; Kamperidis, C.; Mangles, S. P. D.; Najmudin, Z.; Osterhoff, J.; Poder, K.; Rusby, D.; Symes, D. R.; Warwick, J.; Wood, J. C.; Palmer, C. A. J.

    2016-09-01

    In this work, two-dimensional (2D) hydrodynamic simulations of a variable length gas cell were performed using the open source fluid code OpenFOAM. The gas cell was designed to study controlled injection of electrons into a laser-driven wakefield at the Astra Gemini laser facility. The target consists of two compartments: an accelerator and an injector section connected via an aperture. A sharp transition between the peak and plateau density regions in the injector and accelerator compartments, respectively, was observed in simulations with various inlet pressures. The fluid simulations indicate that the length of the down-ramp connecting the sections depends on the aperture diameter, as does the density drop outside the entrance and the exit cones. Further studies showed, that increasing the inlet pressure leads to turbulence and strong fluctuations in density along the axial profile during target filling, and consequently, is expected to negatively impact the accelerator stability.

  18. An application of the FLO-2D Model to debris-flow simulation - a case study of Shinfa village in southern Taiwan

    NASA Astrophysics Data System (ADS)

    Chen, J.-C.; Chuang, M.-R.; Jeng, C.-J.; Wang, J.-S.

    2012-04-01

    Taiwan is an island located in the subtropical zone where typhoons often bring heavy rainfall. Heavy rainfall, stream having steep slope, and weak geological condition resulted in a high susceptibility to debris flow. Especially, Typhoon Morakot struck southern Taiwan on August 8, 2009 with high rainfall intensity and accumulated rainfall as high as 2860 mm for 72 hours. Severe landslides and debris flow hazards were induced. In this work, debris-flow events caused by Typhoon Morakot in Shinfa Village of Liouguei District, where resulted in severe impacts to local communities, in southern Taiwan were selected for case study. A two-dimensional model (FLO-2D software) was used to simulate a debris flow, and the accuracy of the simulation, including flow depth, velocity, sediment, and inundation area, was analyzed in the case study. This study consists of three phases. In the first phase, debris flow data, including information on topography, rainfall and rheological parameters were compiled to establish a database of factors that influence debris flow. For the second phase, a numerical simulation was performed using FLO-2D with the results presented as area of debris-flow inundation, maximum deposit depth, and deposit volume. The simulation results were then compared with the aerial photos and the micro geomorphological study. Finally, suitable conditions for using this model and reasonable parameters needed for simulation are presented. In this study, parameters and processes needed for a numerical simulation method for debris flow routing and depositions are formulated to provide a reference for hazard zone mapping or debris-flow hazard mitigation.

  19. 2D gasdynamic simulation of the kinetics of an oxygen-iodine laser with electric-discharge generation of singlet oxygen

    SciTech Connect

    Chukalovsky, A. A.; Rakhimova, T. V.; Klopovsky, K. S.; Mankelevich, Yu. A.; Proshina, O. V.

    2011-03-15

    The kinetic processes occurring in an electric-discharge oxygen-iodine laser are analyzed with the help of a 2D (r, z) gasdynamic model taking into account transport of excited oxygen, singlet oxygen, and radicals from the electric discharge and their mixing with the iodine-containing gas. The main processes affecting the dynamics of the gas temperature and gain are revealed. The simulation results obtained using the 2D model agree well with the experimental data on the mixture gain. A subsonic oxygen-iodine laser in which singlet oxygen is generated by a 350 W transverse RF discharge excited in an oxygen flow at a pressure P = 10 Torr and the discharge tube wall is covered with mercury oxide is simulated. The simulated mixing system is optimized in terms of the flow rate and the degree of preliminary dissociation of the iodine flow. The optimal regime of continuous operation of a subsonic electric-discharge oxygen-iodine laser is found.

  20. Computer simulation of topological evolution in 2-d grain growth using a continuum diffuse-interface field model

    SciTech Connect

    Fan, D.; Geng, C.; Chen, L.Q.

    1997-03-01

    The local kinetics and topological phenomena during normal grain growth were studied in two dimensions by computer simulations employing a continuum diffuse-interface field model. The relationships between topological class and individual grain growth kinetics were examined, and compared with results obtained previously from analytical theories, experimental results and Monte Carlo simulations. It was shown that both the grain-size and grain-shape (side) distributions are time-invariant and the linear relationship between the mean radii of individual grains and topological class n was reproduced. The moments of the shape distribution were determined, and the differences among the data from soap froth. Potts model and the present simulation were discussed. In the limit when the grain size goes to zero, the average number of grain edges per grain is shown to be between 4 and 5, implying the direct vanishing of 4- and 5-sided grains, which seems to be consistent with recent experimental observations on thin films. Based on the simulation results, the conditions for the applicability of the familiar Mullins-Von Neumann law and the Hillert`s equation were discussed.

  1. User`s guide for the casting process simulator software CaPS-2D, Version 1.0

    SciTech Connect

    Domanus, H.M.; Schmitt, R.C.; Ahuja, S.

    1993-07-01

    Most casting defects occur during initial pouring and therefore the design of the running system, which guides the metal from the ladle into the mold, is crucial. Traditionally, the running system and mold filling are designed by trial and error, which is tedious, time consuming. and expensive. The uncertainties that remain can be overcome by a computer simulation that demonstrates the actual process of mold filling and subsequent solidification. Computer simulation of various processes has become more and more common in recent years. The cost-effectiveness of making flawless castings has made the foundry worker more aware of the process of mold filling, identification of hot spots, etc. The macroscopic Casting Process Simulator (CaPS) software combines heat transfer and fluid flow aspects and can describe a variety of solidification aspects, including mold filling. CaPS is a two-dimensional time-dependent computer code involving a finite-volume formulation for the mass, momentum. and energy equations. CaPS has the following characteristics: CaPS uses the PATRAN geometric modeling package for constructing the geometry, generating a neutral file consisting of a list of named components, and post-processing of the simulation results; building the geometry independently of the mesh is a time-saving procedure. A structured mesh generator of structured regular cells is included and is interfaced with the neutral-file output of the solid geometric package. Visual user interfaces have been developed on the basis of the HOOPS package, which contains a hierarchical database of geometric information. The CaPS shell scripts interactively provide a step-by-step procedure to simulate the solidification process, thus making the software very user-friendly.

  2. 3D numerical simulation of laser-generated Lamb waves propagation in 2D acoustic black holes

    NASA Astrophysics Data System (ADS)

    Yan, Shiling; Lomonosov, Alexey M.; Shen, Zhonghua; Han, Bing

    2015-05-01

    Acoustic black holes have been widely used in damping structural vibration. In this work, the Lamb waves are utilized to evaluate the specified structure. The three-dimensional numerical model of acoustic black holes with parabolic profile was established. The propagation of laser-generated Lamb wave in two-dimensional acoustic black holes was numerically simulated using the finite element method. The results indicated that the incident wave was trapped by the structure obviously.

  3. 2D hybrid simulations of super-diffusion at the magnetopause driven by Kelvin-Helmholtz instability

    SciTech Connect

    Cowee, Misa M; Winske, Dan; Gary, S Peter

    2009-01-01

    This manuscript describes the self-consistent simulation of diffusion at the magnetopause driven by Kelvin-Helmholtz (KH) instability. Two-dimensional hybrid (kinetic ions, fluid electrons) simulations of the most KH-unstable configuration where the shear flow is oriented perpendicular to the uniform magnetic field are carried out. The motion of the simulation particles are tracked during the run and their mean-square displacement normal to the magnetopause is calculated from which diffusion coefficients are determined. The diffusion coefficients are found to be time dependent, with D{sub x} {proportional_to} t{sup {alpha}}, where {alpha} > 1. Additionally, the probability distribution functions (PDF) of the 'jump lengths' the particles make over time are found to be non-gaussian. Such time-dependent diffusion coefficients and non-gaussian PDF's have been associated with so-called 'super-diffusion', in which diffusive mixing of particles is enhanced over classical diffusion. The results indicate that while turbulence associated with the break-down of vortices contributes to this enhanced diffusion, it is the growth of large-scale, coherent vortices is the more important process in facilitating it.

  4. 2D Lattice Boltzmann Simulation Of Chemical Reactions Within Rayleigh-Bénard And Poiseuille-Bénard Convection Systems

    NASA Astrophysics Data System (ADS)

    Amaya-Ventura, Gilberto; Rodríguez-Romo, Suemi

    2011-09-01

    This paper deals with the computational simulation of the reaction-diffusion-advection phenomena emerging in Rayleigh-Bénard (RB) and Poiseuille-Bénard reactive convection systems. We use the Boussinesq's approximation for buoyancy forces and the Lattice Boltzmann method (LBM). The first kinetic mesoscopic model proposed here is based on the discrete Boltzmann equation needed to solve the momentum balance coupled with buoyancy forces. Then, a second lattice Boltzmann algorithm is applied to solve the reaction-diffusion-advection equation to calculate the evolution of the chemical species concentration. We use a reactive system composed by nitrous oxide (so call laughing gas) in air as an example; its spatio-temporal decomposition is calculated. Two cases are considered, a rectangular enclosed cavity and an open channel. The simulations are performed at low Reynolds numbers and in a steady state between the first and second thermo-hydrodynamic instabilities. The results presented here, for the thermo-hydrodynamic behavior, are in good agreement with experimental data; while our| chemical kinetics simulation yields expected results. Some applications of our approach are related to chemical reactors and atmospheric phenomena, among others.

  5. Investigation of the Triggering Mechanism of Magnetospheric Substorm via 2-1/2 D Full-Particle Simulation

    NASA Astrophysics Data System (ADS)

    Uchino, H.; Machida, S.

    2012-12-01

    A physical process of the substorm triggering in the Earth's Magnetotail is thought to be closely related to the magnetic reconnection and the tearing instability. Recently we proposed a new scheme of the substorm onset called "Catapult Current Sheet Relaxation (CCSR) Model " to physically understand the results from GEOTAIL and THEMIS data. The CCSR Model has characters that are the decrease of the total pressure and thinning of the current sheet at the distance about -12Re in the magnetotail a few minutes before the substorm onset, and the simultaneous occurrence of the dipolarization at X~-10Re and the magnetic reconnection at X~-20Re at the time of the onset. In this study, we investigate a stability of the current sheet and the particle acceleration via particle simulation in order to assess the validity of the CCSR model and to clarify the mechanism of substorm onset. We give an initial magnetic field structure which is akin to the Earth's dipole magnetic field together with a stretched magnetic field by thin current sheet, and further add a weak northward magnetic field at the place where Near-Earth Neutral Line is expected to be formed. The results of simulation contain similar features that characterize the CCSR Model. A physically interpretation of the simulation result with the linear instability theory as well as comparison with observations will be given.

  6. Hyporheic Exchange: Analysis of Aquifer Heterogeneity, Channel Morphology and Bedforms- 2D and 3D Simulations Using MODFLOW and MODPATH

    NASA Astrophysics Data System (ADS)

    Matos, J. R.; Welty, C.; Packman, A.

    2005-12-01

    The main purpose of the simulations in this research is the analysis of three-dimensional surface-groundwater interchange in heterogeneous systems. The effects of channel pattern, bed forms and aquifer heterogeneity on flow interactions between stream and groundwater systems are examined in order to contribute for a better understanding of the hyporheic process. A two-dimensional approach was also adopted to allow comparisons with the three-dimensional results. The grid was designed using the correlation scales of the heterogeneous fields and the scale of the stream meanders. MODFLOW and MODPATH were used to evaluate magnitude, direction and spatial distribution of the exchange flow. PMWIN and PMPATH were used as pre and post-processors during the construction of the models and analysis of results. Gaining and losing streams as well as parallel flow and flow across streams were simulated as idealized cases intended to describe how properties of the streambed and aquifer in low-gradient lowland streams contribute to hyporheic exchange. At first a straight river was analyzed then meandering streams were created with a sine curve and variations on wavelength and amplitude. Bed forms were simulated assuming a sinusoidal distribution of pressure head in the bed surface. Aspects of the influence of bedforms on mechanisms such as "pumping" and "turnover" are expected to be addressed with simulations. Flow velocities between 20 and 40 cm/s in the channel were tested with the objective of showing the influence of river morphology and natural bed forms on the flow exchange in the hyporheic zone. Several meander cycles and four levels of hydraulic conductivity variance were analyzed. Results of flow variances along the cross-sections and wetted perimeter show the increasing on hyporheic exchange as the degree of heterogeneity increases. Particle tracking was performed to define hyporheic residence time distributions. When comparing the homogeneous fields with all degrees of

  7. 2D and 3D Eulerian Simulations of the Dynamics and Gas and Aerosol Chemistry of a Young Biomass Burning Smoke Plume from a Savannah Fire

    NASA Astrophysics Data System (ADS)

    Alvarado, M. J.; Prinn, R. G.

    2007-12-01

    The growth of aerosol particles and production of ozone in young smoke plumes is the result of a complex interaction between the mean flow in the smoke plume, turbulent diffusion, gas-phase oxidation, coagulation, and mass transfer between phases. Models allow us to separate the effects of these processes and predict their impact on the global environment. We present the results of two and three-dimensional Eulerian simulations of the dynamics and chemistry of the smoke plume formed by the Timbavati savannah fire studied during SAFARI 2000 (Hobbs et al., 2003, JGR, doi:10.1029/2002JD002352). The dynamical model is an extension of an Eulerian cloud-resolving model that has previously been used to study the role of deep convective clouds on tropospheric chemistry (Wang and Prinn, 2000, JGR, 105(D17) 22,269-22,297). The model includes a source of sensible heat, gases, and particles at the surface to simulate the savannah fire. The new gas and aerosol chemistry model includes heterogeneous chemistry, kinetic mass transfer, coagulation and the formation of secondary organic and inorganic aerosol. Photolysis rates are calculated based on the solution of the radiative transfer equation within the plume, including the scattering and absorption of radiation by the smoke aerosols. Our preliminary 2D Eulerian results using standard chemistry and UV fluxes show that the model can simulate the lower but not the higher levels of O3 observed. Also, the simulated 2D O3 field shows a wave-like pattern in the downwind direction, even though the emissions from the fire are held constant. This suggests that plume heterogeneity in the downwind direction may account for some of the observed variability in O3. We will present results of runs incorporating higher resolution calculation of photolysis rates, heterogeneous HONO formation, and gas phase reactions involving the uncharacterized organic compounds observed in the gas phase of the Timbavati plume in order to better simulate these

  8. Section 1. Simulation of surface-water integrated flow and transport in two-dimensions: SWIFT2D user's manual

    USGS Publications Warehouse

    Schaffranek, Raymond W.

    2004-01-01

    A numerical model for simulation of surface-water integrated flow and transport in two (horizontal-space) dimensions is documented. The model solves vertically integrated forms of the equations of mass and momentum conservation and solute transport equations for heat, salt, and constituent fluxes. An equation of state for salt balance directly couples solution of the hydrodynamic and transport equations to account for the horizontal density gradient effects of salt concentrations on flow. The model can be used to simulate the hydrodynamics, transport, and water quality of well-mixed bodies of water, such as estuaries, coastal seas, harbors, lakes, rivers, and inland waterways. The finite-difference model can be applied to geographical areas bounded by any combination of closed land or open water boundaries. The simulation program accounts for sources of internal discharges (such as tributary rivers or hydraulic outfalls), tidal flats, islands, dams, and movable flow barriers or sluices. Water-quality computations can treat reactive and (or) conservative constituents simultaneously. Input requirements include bathymetric and topographic data defining land-surface elevations, time-varying water level or flow conditions at open boundaries, and hydraulic coefficients. Optional input includes the geometry of hydraulic barriers and constituent concentrations at open boundaries. Time-dependent water level, flow, and constituent-concentration data are required for model calibration and verification. Model output consists of printed reports and digital files of numerical results in forms suitable for postprocessing by graphical software programs and (or) scientific visualization packages. The model is compatible with most mainframe, workstation, mini- and micro-computer operating systems and FORTRAN compilers. This report defines the mathematical formulation and computational features of the model, explains the solution technique and related model constraints, describes the

  9. 2D/3D quench simulation using ANSYS for epoxy impregnated Nb3Sn high field magnets

    SciTech Connect

    Ryuji Yamada et al.

    2002-09-19

    A quench program using ANSYS is developed for the high field collider magnet for three-dimensional analysis. Its computational procedure is explained. The quench program is applied to a one meter Nb{sub 3}Sn high field model magnet, which is epoxy impregnated. The quench simulation program is used to estimate the temperature and mechanical stress inside the coil as well as over the whole magnet. It is concluded that for the one meter magnet with the presented cross section and configuration, the thermal effects due to the quench is tolerable. But we need much more quench study and improvements in the design for longer magnets.

  10. Simulation of Ultra-Small MOSFETs Using a 2-D Quantum-Corrected Drift-Diffusion Model

    NASA Technical Reports Server (NTRS)

    Biegel, Bryan A.; Rafferty, Conor S.; Yu, Zhiping; Dutton, Robert W.; Ancona, Mario G.; Saini, Subhash (Technical Monitor)

    1998-01-01

    We describe an electronic transport model and an implementation approach that respond to the challenges of device modeling for gigascale integration. We use the density-gradient (DG) transport model, which adds tunneling and quantum smoothing of carrier density profiles to the drift-diffusion model. We present the current implementation of the DG model in PROPHET, a partial differential equation solver developed by Lucent Technologies. This implementation approach permits rapid development and enhancement of models, as well as run-time modifications and model switching. We show that even in typical bulk transport devices such as P-N diodes and BJTs, DG quantum effects can significantly modify the I-V characteristics. Quantum effects are shown to be even more significant in small, surface transport devices, such as sub-0.1 micron MOSFETs. In thin-oxide MOS capacitors, we find that quantum effects may reduce gate capacitance by 25% or more. The inclusion of quantum effects in simulations dramatically improves the match between C-V simulations and measurements. Significant quantum corrections also occur in the I-V characteristics of short-channel MOSFETs due to the gate capacitance correction.

  11. Evolving detectors of 2D patterns on a simulated CAM-Brain machine: an evolvable hardware tool for building a 75-million-neuron artificial brain

    NASA Astrophysics Data System (ADS)

    de Garis, Hugo; Korkin, Michael; Guttikonda, Padma; Cooley, Donald

    2000-11-01

    This paper presents some simulation results of the evolution of 2D visual pattern recognizers to be implemented very shortly on real hardware, namely the 'CAM-Brain Machine' (CBM), an FPGA based piece of evolvable hardware which implements a genetic algorithm (GA) to evolve a 3D cellular automata (CA) based neural network circuit module, of approximately 1,000 neurons, in about a second, i.e. a complete run of a GA, with 10,000s of circuit growths and performance evaluations. Up to 65,000 of these modules, each of which is evolved with a humanly specified function, can be downloaded into a large RAM space, and interconnected according to humanly specified gvdvips -o SPIE-2000.ps SPIE-2000 artificial brain architectures. This RAM, containing an artificial brain with up to 75 million neurons, is then updated by the CBM at a rate of 130 billion CA cells per second. Such speeds will enable real time control of robots and hopefully the birth of a new research field that we call 'brain building.' The first such artificial brain, to be built at STARLAB in 2000 and beyond, will be used to control the behaviors of a life sized kitten robot called 'Robokitty.' This kitten robot will need 2D pattern recognizers in the visual section of its artificial brain. This paper presents simulation results on the evolvability and generalization properties of such recognizers.

  12. Simulation of decay heat removal by natural convection in a pool type fast reactor model-ramona-with coupled 1D/2D thermal hydraulic code system

    SciTech Connect

    Kasinathan, N.; Rajakumar, A.; Vaidyanathan, G.; Chetal, S.C.

    1995-09-01

    Post shutdown decay heat removal is an important safety requirement in any nuclear system. In order to improve the reliability of this function, Liquid metal (sodium) cooled fast breeder reactors (LMFBR) are equipped with redundant hot pool dipped immersion coolers connected to natural draught air cooled heat exchangers through intermediate sodium circuits. During decay heat removal, flow through the core, immersion cooler primary side and in the intermediate sodium circuits are also through natural convection. In order to establish the viability and validate computer codes used in making predictions, a 1:20 scale experimental model called RAMONA with water as coolant has been built and experimental simulation of decay heat removal situation has been performed at KfK Karlsruhe. Results of two such experiments have been compiled and published as benchmarks. This paper brings out the results of the numerical simulation of one of the benchmark case through a 1D/2D coupled code system, DHDYN-1D/THYC-2D and the salient features of the comparisons. Brief description of the formulations of the codes are also included.

  13. Uncertainty Assessments of 2D and Axisymmetric Hypersonic Shock Wave - Turbulent Boundary Layer Interaction Simulations at Compression Corners

    NASA Technical Reports Server (NTRS)

    Gnoffo, Peter A.; Berry, Scott A.; VanNorman, John W.

    2011-01-01

    This paper is one of a series of five papers in a special session organized by the NASA Fundamental Aeronautics Program that addresses uncertainty assessments for CFD simulations in hypersonic flow. Simulations of a shock emanating from a compression corner and interacting with a fully developed turbulent boundary layer are evaluated herein. Mission relevant conditions at Mach 7 and Mach 14 are defined for a pre-compression ramp of a scramjet powered vehicle. Three compression angles are defined, the smallest to avoid separation losses and the largest to force a separated flow engaging more complicated flow physics. The Baldwin-Lomax and the Cebeci-Smith algebraic models, the one-equation Spalart-Allmaras model with the Catrix-Aupoix compressibility modification and two-equation models including Menter SST, Wilcox k-omega 98, and Wilcox k-omega 06 turbulence models are evaluated. Each model is fully defined herein to preclude any ambiguity regarding model implementation. Comparisons are made to existing experimental data and Van Driest theory to provide preliminary assessment of model form uncertainty. A set of coarse grained uncertainty metrics are defined to capture essential differences among turbulence models. Except for the inability of algebraic models to converge for some separated flows there is no clearly superior model as judged by these metrics. A preliminary metric for the numerical component of uncertainty in shock-turbulent-boundary-layer interactions at compression corners sufficiently steep to cause separation is defined as 55%. This value is a median of differences with experimental data averaged for peak pressure and heating and for extent of separation captured in new, grid-converged solutions presented here. This value is consistent with existing results in a literature review of hypersonic shock-turbulent-boundary-layer interactions by Roy and Blottner and with more recent computations of MacLean.

  14. AnisWave 2D

    2004-08-01

    AnisWave2D is a 2D finite-difference code for a simulating seismic wave propagation in fully anisotropic materials. The code is implemented to run in parallel over multiple processors and is fully portable. A mesh refinement algorithm has been utilized to allow the grid-spacing to be tailored to the velocity model, avoiding the over-sampling of high-velocity materials that usually occurs in fixed-grid schemes.

  15. Techniques utilized in the simulated altitude testing of a 2D-CD vectoring and reversing nozzle

    NASA Technical Reports Server (NTRS)

    Block, H. Bruce; Bryant, Lively; Dicus, John H.; Moore, Allan S.; Burns, Maureen E.; Solomon, Robert F.; Sheer, Irving

    1988-01-01

    Simulated altitude testing of a two-dimensional, convergent-divergent, thrust vectoring and reversing exhaust nozzle was accomplished. An important objective of this test was to develop test hardware and techniques to properly operate a vectoring and reversing nozzle within the confines of an altitude test facility. This report presents detailed information on the major test support systems utilized, the operational performance of the systems and the problems encountered, and test equipment improvements recommended for future tests. The most challenging support systems included the multi-axis thrust measurement system, vectored and reverse exhaust gas collection systems, and infrared temperature measurement systems used to evaluate and monitor the nozzle. The feasibility of testing a vectoring and reversing nozzle of this type in an altitude chamber was successfully demonstrated. Supporting systems performed as required. During reverser operation, engine exhaust gases were successfully captured and turned downstream. However, a small amount of exhaust gas spilled out the collector ducts' inlet openings when the reverser was opened more than 60 percent. The spillage did not affect engine or nozzle performance. The three infrared systems which viewed the nozzle through the exhaust collection system worked remarkably well considering the harsh environment.

  16. New insights into the generalized Rutherford equation for nonlinear neoclassical tearing mode growth from 2D reduced MHD simulations

    NASA Astrophysics Data System (ADS)

    Westerhof, E.; de Blank, H. J.; Pratt, J.

    2016-03-01

    Two dimensional reduced MHD simulations of neoclassical tearing mode growth and suppression by ECCD are performed. The perturbation of the bootstrap current density and the EC drive current density perturbation are assumed to be functions of the perturbed flux surfaces. In the case of ECCD, this implies that the applied power is flux surface averaged to obtain the EC driven current density distribution. The results are consistent with predictions from the generalized Rutherford equation using common expressions for Δ \\text{bs}\\prime and Δ \\text{ECCD}\\prime . These expressions are commonly perceived to describe only the effect on the tearing mode growth of the helical component of the respective current perturbation acting through the modification of Ohm’s law. Our results show that they describe in addition the effect of the poloidally averaged current density perturbation which acts through modification of the tearing mode stability index. Except for modulated ECCD, the largest contribution to the mode growth comes from this poloidally averaged current density perturbation.

  17. Optoacoustic temperature monitoring during HIFU impact on biological tissues: ex vivo study and numerical simulations of 2D temperature reconstruction

    NASA Astrophysics Data System (ADS)

    Nikitin, Sergey; Khokhlova, Tatiana; Pelivanov, Ivan

    2012-02-01

    Dependencies of the optoacoustic (OA) transformation efficiency on tissue temperature were obtained for the application in OA temperature monitoring during thermal therapies. Accurate measurement of the OA signal amplitude versus temperature was performed in different ex-vivo tissues in the temperature range 25°C - 80°C. The investigated tissues were selected to represent different structural components: chicken breast (skeletal muscle), porcine lard (fatty tissue) and porcine liver (richly perfused tissue). Backward mode of the OA signal detection and a narrow probe laser beam were used in the experiments to avoid the influence of changes in light scattering with tissue coagulation on the OA signal amplitude. Measurements were performed in heating and cooling regimes. Characteristic behavior of the OA signal amplitude temperature dependences in different temperature ranges were described in terms of changes in different structural components of the tissue samples. Finally, numerical simulation of the OA temperature monitoring with a linear transducers array was performed to demonstrate the possibility of real-time temperature mapping.

  18. Global approach for transient shear wave inversion based on the adjoint method: a comprehensive 2D simulation study.

    PubMed

    Arnal, B; Pinton, G; Garapon, P; Pernot, M; Fink, M; Tanter, M

    2013-10-01

    Shear wave imaging (SWI) maps soft tissue elasticity by measuring shear wave propagation with ultrafast ultrasound acquisitions (10 000 frames s(-1)). This spatiotemporal data can be used as an input for an inverse problem that determines a shear modulus map. Common inversion methods are local: the shear modulus at each point is calculated based on the values of its neighbour (e.g. time-of-flight, wave equation inversion). However, these approaches are sensitive to the information loss such as noise or the lack of the backscattered signal. In this paper, we evaluate the benefits of a global approach for elasticity inversion using a least-squares formulation, which is derived from full waveform inversion in geophysics known as the adjoint method. We simulate an acoustic waveform in a medium with a soft and a hard lesion. For this initial application, full elastic propagation and viscosity are ignored. We demonstrate that the reconstruction of the shear modulus map is robust with a non-uniform background or in the presence of noise with regularization. Compared to regular local inversions, the global approach leads to an increase of contrast (∼+3 dB) and a decrease of the quantification error (∼+2%). We demonstrate that the inversion is reliable in the case when there is no signal measured within the inclusions like hypoechoic lesions which could have an impact on medical diagnosis.

  19. Planet formation bursts at the borders of the dead zone in 2D numerical simulations of circumstellar disks

    NASA Astrophysics Data System (ADS)

    Lyra, W.; Johansen, A.; Zsom, A.; Klahr, H.; Piskunov, N.

    2009-04-01

    Context: As accretion in protoplanetary disks is enabled by turbulent viscosity, the border between active and inactive (dead) zones constitutes a location where there is an abrupt change in the accretion flow. The gas accumulation that ensues triggers the Rossby wave instability, which in turn saturates into anticyclonic vortices. It has been suggested that the trapping of solids within them leads to a burst of planet formation on very short timescales. Aims: We study in the formation and evolution of the vortices in greater detail, focusing on the implications for the dynamics of embedded solid particles and planet formation. Methods: We performed two-dimensional global simulations of the dynamics of gas and solids in a non-magnetized thin protoplanetary disk with the Pencil code. We used multiple particle species of radius 1, 10, 30, and 100 cm. We computed the particles' gravitational interaction by a particle-mesh method, translating the particles' number density into surface density and computing the corresponding self-gravitational potential via fast Fourier transforms. The dead zone is modeled as a region of low viscosity. Adiabatic and locally isothermal equations of state are used. Results: The Rossby wave instability is triggered under a variety of conditions, thus making vortex formation a robust process. Inside the vortices, fast accumulation of solids occurs and the particles collapse into objects of planetary mass on timescales as short as five orbits. Because the drag force is size-dependent, aerodynamical sorting ensues within the vortical motion, and the first bound structures formed are composed primarily of similarly-sized particles. In addition to erosion due to ram pressure, we identify gas tides from the massive vortices as a disrupting agent of formed protoplanetary embryos. We find evidence that the backreaction of the drag force from the particles onto the gas modifies the evolution of the Rossby wave instability, with vortices being

  20. Solution structure of GCCAAT recognition motif by 2D NMR, spectral simulation, molecular modeling, and distance geometry calculations.

    PubMed

    Nibedita, R; Kumar, R A; Majumdar, A; Hosur, R V; Govil, G; Majumder, K; Chauhan, V S

    1993-09-01

    Solution conformation of a self-complementary 14-mer DNA duplex (d-GGATTGGCCAATCC) containing the GCCAAT recognition motif of several transcription factors has been investigated by NMR spectroscopy. Complete resonance assignment of all the protons (except H5',H5'' protons) has been obtained following standard procedures based on two-dimensional NMR techniques. Three-bond coupling constants have been determined by spectral simulation procedures. New strategies have been described and employed for quantifying NOE intensities from the structural point of view. Approximate ranges of gamma torsion angles have been obtained from a selective NOESY experiment, by estimating the J(4'-5'), J(4'-5''), or their sum in the H1'-H4' cross peaks of the spectrum. Likewise, ranges of epsilon torsion angles have been obtained by monitoring the H3' multiplicities in the H8/H6-H3' cross peaks in selective NOESY spectra. With the help of such a total of 73 coupling constraints, 79 NOE intensity constraints, and 108 H-bond constraints, model building has been carried out to obtain a structure which satisfies the constraints. Starting from such a structure, an expanded distance constraint set has been created which has been used for the distance geometry calculations using the program TANDY. In the best structure thus derived, interesting irregularities similar to a BI-BII transition have been observed in the center. The molecule exhibits a bend. The overall base stacking is different from that in either B- or A-DNA models. The base pairs are tilted with respect to the local helix axes. The observed structural features are likely to have important implications for the recognition mechanism of the GCCAAT motif.

  1. BET_VH probabilistic assessment of pyroclastic flows hazard at El Misti volcano, South Peru, based on geological record and numerical simulations with TITAN2D

    NASA Astrophysics Data System (ADS)

    Constantinescu, R.; Thouret, J. C.; Sandri, L.; Irimus, I. A.; Stefanescu, R.

    2012-04-01

    Pyroclastic density currents, which include pyroclastic surges and pyroclastic flows (PFs), are among the most dangerous volcanic phenomena. We present a probabilistic hazard assessment of the PFs generated from eruptive column collapse at El Misti volcano (5822 m) in South Peru. The high relief of the cone, the location of the city of Arequipa (~1,000,000 people) on two large volcanoclastic fans and the H (3.5 km)/L (17 km) ratio (0.2) between the summit and the city center, make PFs a direct threat. We consider three eruption scenario sizes: small Vulcanian/Phreatomagmatic (VEI 2), medium Sub-Plinian (VEI 3-4), and large Plinian (VEI 4+). We use the Event-Tree approach in a Bayesian scheme with BET_VH (Bayesian Event Tree for Volcanic Hazard) software. Quantitative data that stem from numerical simulations from TITAN2D (termed prior models) and from stratigraphic record (termed past data) are input to BET_VH, which enables us to compute the probabilities (in a 1-year time window) of (i) having an eruption (ii) in a selected location/vent (iii) of a specific size, (iv) and that this eruption will produce PFs (v) that will reach a location of interest around El Misti. TITAN2D simulation runs, expressed as color-coded thicknesses of PDC deposits, fit well the extent of past PFs deposits, including thick confined deposits (0.5-7 m) in the Rio Chili canyon and its tributary ravines (Quebradas San Lazaro, Huarangal and Agua Salada).The unconfined, thinner (≤10cm) deposits, as displayed by simulation runs on the interfluves, is attributed to ash-cloud surges. Such thin, fine ash deposits have not been emphasized in geological maps either because they have been removed away or remain yet unrecognized. The simulated Vulcanian flows, restricted to the upper part of the cone, become confined (0.1-1m thick) in the ravines which converge towards each of the three Quebradas. The simulated Subplinian PF deposits reach 0.1 to 1 m thick in the Quebradas and 1-4 m WNW of El

  2. A pseudo-spectral method for the simulation of poro-elastic seismic wave propagation in 2D polar coordinates using domain decomposition

    SciTech Connect

    Sidler, Rolf; Carcione, José M.; Holliger, Klaus

    2013-02-15

    We present a novel numerical approach for the comprehensive, flexible, and accurate simulation of poro-elastic wave propagation in 2D polar coordinates. An important application of this method and its extensions will be the modeling of complex seismic wave phenomena in fluid-filled boreholes, which represents a major, and as of yet largely unresolved, computational problem in exploration geophysics. In view of this, we consider a numerical mesh, which can be arbitrarily heterogeneous, consisting of two or more concentric rings representing the fluid in the center and the surrounding porous medium. The spatial discretization is based on a Chebyshev expansion in the radial direction and a Fourier expansion in the azimuthal direction and a Runge–Kutta integration scheme for the time evolution. A domain decomposition method is used to match the fluid–solid boundary conditions based on the method of characteristics. This multi-domain approach allows for significant reductions of the number of grid points in the azimuthal direction for the inner grid domain and thus for corresponding increases of the time step and enhancements of computational efficiency. The viability and accuracy of the proposed method has been rigorously tested and verified through comparisons with analytical solutions as well as with the results obtained with a corresponding, previously published, and independently benchmarked solution for 2D Cartesian coordinates. Finally, the proposed numerical solution also satisfies the reciprocity theorem, which indicates that the inherent singularity associated with the origin of the polar coordinate system is adequately handled.

  3. 2D and 3D Visualizations of the Fault Areas, Initial Heights and Tsunami Simulations of Five Largest Historical Earthquakes in Mediterrenean Region.

    NASA Astrophysics Data System (ADS)

    Gürleme, Beran; Tarık Meriç, Hakan; Ulutaş, Ergin; Anunziato, Alessandro

    2016-04-01

    The aim of this study is the simulation and visualization of the initial and maximum tsunami wave heights in 2D and 3D along the Mediterranean coasts inferred from the five largest earthquakes in history in this region. The earthquakes considered in the study are 21 July 365 Crete, 8 August 1303 Crete, 3 May 1481 Rhodes, 28 December Messina and 21 May 2003 Algeria. All these earthquakes spawned tsunamis and inflicted damage in coastal regions. The study was conducted to explain which could be the potential Tsunami consequences caused by similar earthquakes occurring in the region in the future. The methodology used for the calculation of tsunami wave heights from the earthquakes includes the determination of earthquake parameters, modeling of the initial wave height, simulation of the wave propagation and calculation of the maximum wave heights near coastal areas. The parameters of the earthquakes are based on previously published fault mechanism solutions and known tectonic features of the regions. Static dislocation algorithm for the initial wave height is used from the parameters of focal mechanism solutions. The study was conducted also to understand the reliability of the previously published focal mechanism solutions for the earthquakes by using the principal stress axis in the regions. The 2D and 3D visualized models of tsunamis from the earthquakes include isometric grid representing the sea surface for the purpose of a better understanding of the initial tsunami mechanism compared to 1D visualizations. In many studies, the earthquake locations, tectonic features of the regions, initial heights and tsunami simulations are shown on maps as bird's eye in 1D visualization. However these kinds of features are related in depths and bathymetric features. For that reason, our approaches will contribute to have better understanding where the uplift- subsidence of initial heights and crests-troughs of simulated wave heights and thus provide a better insight of the

  4. Respiratory motion compensation for simultaneous PET/MR based on a 3D-2D registration of strongly undersampled radial MR data: a simulation study

    NASA Astrophysics Data System (ADS)

    Rank, Christopher M.; Heußer, Thorsten; Flach, Barbara; Brehm, Marcus; Kachelrieß, Marc

    2015-03-01

    We propose a new method for PET/MR respiratory motion compensation, which is based on a 3D-2D registration of strongly undersampled MR data and a) runs in parallel with the PET acquisition, b) can be interlaced with clinical MR sequences, and c) requires less than one minute of the total MR acquisition time per bed position. In our simulation study, we applied a 3D encoded radial stack-of-stars sampling scheme with 160 radial spokes per slice and an acquisition time of 38 s. Gated 4D MR images were reconstructed using a 4D iterative reconstruction algorithm. Based on these images, motion vector fields were estimated using our newly-developed 3D-2D registration framework. A 4D PET volume of a patient with eight hot lesions in the lungs and upper abdomen was simulated and MoCo 4D PET images were reconstructed based on the motion vector fields derived from MR. For evaluation, average SUVmean values of the artificial lesions were determined for a 3D, a gated 4D, a MoCo 4D and a reference (with ten-fold measurement time) gated 4D reconstruction. Compared to the reference, 3D reconstructions yielded an underestimation of SUVmean values due to motion blurring. In contrast, gated 4D reconstructions showed the highest variation of SUVmean due to low statistics. MoCo 4D reconstructions were only slightly affected by these two sources of uncertainty resulting in a significant visual and quantitative improvement in terms of SUVmean values. Whereas temporal resolution was comparable to the gated 4D images, signal-to-noise ratio and contrast-to-noise ratio were close to the 3D reconstructions.

  5. VIBA-Lab 3.0: Computer program for simulation and semi-quantitative analysis of PIXE and RBS spectra and 2D elemental maps

    NASA Astrophysics Data System (ADS)

    Orlić, Ivica; Mekterović, Darko; Mekterović, Igor; Ivošević, Tatjana

    2015-11-01

    VIBA-Lab is a computer program originally developed by the author and co-workers at the National University of Singapore (NUS) as an interactive software package for simulation of Particle Induced X-ray Emission and Rutherford Backscattering Spectra. The original program is redeveloped to a VIBA-Lab 3.0 in which the user can perform semi-quantitative analysis by comparing simulated and measured spectra as well as simulate 2D elemental maps for a given 3D sample composition. The latest version has a new and more versatile user interface. It also has the latest data set of fundamental parameters such as Coster-Kronig transition rates, fluorescence yields, mass absorption coefficients and ionization cross sections for K and L lines in a wider energy range than the original program. Our short-term plan is to introduce routine for quantitative analysis for multiple PIXE and XRF excitations. VIBA-Lab is an excellent teaching tool for students and researchers in using PIXE and RBS techniques. At the same time the program helps when planning an experiment and when optimizing experimental parameters such as incident ions, their energy, detector specifications, filters, geometry, etc. By "running" a virtual experiment the user can test various scenarios until the optimal PIXE and BS spectra are obtained and in this way save a lot of expensive machine time.

  6. Improved Performances in Subsonic Flows of an SPH Scheme with Gradients Estimated Using an Integral Approach

    NASA Astrophysics Data System (ADS)

    Valdarnini, R.

    2016-11-01

    In this paper, we present results from a series of hydrodynamical tests aimed at validating the performance of a smoothed particle hydrodynamics (SPH) formulation in which gradients are derived from an integral approach. We specifically investigate the code behavior with subsonic flows, where it is well known that zeroth-order inconsistencies present in standard SPH make it particularly problematic to correctly model the fluid dynamics. In particular, we consider the Gresho–Chan vortex problem, the growth of Kelvin–Helmholtz instabilities, the statistics of driven subsonic turbulence and the cold Keplerian disk problem. We compare simulation results for the different tests with those obtained, for the same initial conditions, using standard SPH. We also compare the results with the corresponding ones obtained previously with other numerical methods, such as codes based on a moving-mesh scheme or Godunov-type Lagrangian meshless methods. We quantify code performances by introducing error norms and spectral properties of the particle distribution, in a way similar to what was done in other works. We find that the new SPH formulation exhibits strongly reduced gradient errors and outperforms standard SPH in all of the tests considered. In fact, in terms of accuracy, we find good agreement between the simulation results of the new scheme and those produced using other recently proposed numerical schemes. These findings suggest that the proposed method can be successfully applied for many astrophysical problems in which the presence of subsonic flows previously limited the use of SPH, with the new scheme now being competitive in these regimes with other numerical methods.

  7. GPU-accelerated adaptive particle splitting and merging in SPH

    NASA Astrophysics Data System (ADS)

    Xiong, Qingang; Li, Bo; Xu, Ji

    2013-07-01

    Graphical processing unit (GPU) implementation of adaptive particle splitting and merging (APS) in the framework of smoothed particle hydrodynamics (SPH) is presented. Particle splitting and merging process are carried out based on a prescribed criterion. Multiple time stepping technology is used to reduce computational cost further. Detailed implementations on both single- and multi-GPU are discussed. A benchmark test that is a flow past fixed periodic circles is simulated to investigate the accuracy and speed of the algorithm. Comparable precision with uniformly fine simulation is achieved by APS, whereas computational demand is reduced considerably. Satisfactory speedup and acceptable scalability are obtained, demonstrating that GPU-accelerated APS is a promising tool to speed up large-scale particle-based simulations.

  8. Probabilistic hazard analysis of dense Pyroclastic Density Currents at Vesuvius (Italy) via parametric uncertainty characterization of TITAN2D numerical simulator

    NASA Astrophysics Data System (ADS)

    Tierz, Pablo; Ramona Stefanescu, Elena; Sandri, Laura; Patra, Abani; Marzocchi, Warner; Sulpizio, Roberto

    2014-05-01

    Probabilistic hazard assessments of Pyroclastic Density Currents (PDCs) are of great interest for decision-making purposes. However, there is a limited number of published works available on this topic. Recent advances in computation and statistical methods are offering new opportunities beyond the classical Monte Carlo (MC) sampling which is known as a simple and robust method but it usually turns out to be slow and computationally intractable. In this work, Titan2D numerical simulator has been coupled to Polynomial Chaos Quadrature (PCQ) to propagate the simulator parametric uncertainty and compute VEI-based probabilistic hazard maps of dense PDCs formed as a result of column collapse at Vesuvius volcano, Italy. Due to the lack of knowledge about the exact conditions under which these PDCs will form, Probability Distribution Functions (PDFs) are assigned to the simulator input parameters (Bed Friction Angle and Volume) according to three VEI sizes. Uniform distributions were used for both parameters since there is insufficient information to assume that any value in the range is more likely that any other value. Reasonable (and compatible) ranges for both variables were constrained according to past eruptions at Vesuvius volcanic system. On the basis of reasoning above a number of quadrature points were taken within those ranges, which resulted in one execution of the TITAN2D code at each quadrature point. With a computational cost several orders of magnitude smaller than MC, exceedance probabilities for a given threshold of flow depth (and conditional to the occurrence of VEI3, VEI4 and VEI5 eruptions) were calculated using PCQ. Moreover, PCQ can be run at different threshold values of the same output variable (flow depth, speed, kinetic energy, …) and, therefore, it can serve to compute Exceedance Probability curves (aka hazard curves) at singular points inside the hazard domain, representing the most important and useful scientific input to quantitative risk

  9. Short-term groundwater fluxes in the hyporheic zone as a consequence of changing river stages; numerical simulation by HYDRUS 2D/3D.

    NASA Astrophysics Data System (ADS)

    Wyseure, Guido; Chou, Po-Yi

    2010-05-01

    All hydrological handbooks contain methods for direct runoff and base-flow separation. The semi-log separation method is the most classical one. One can, however, question the physical base for such method. In addition, the water fluxes in the riverbed are important for ecology and water quality. In our study an 2-D cross-section including the river and the surrounding aquifer was set-up in HYDRUS 2D/3D. Initial conditions were a steady-state subsurface flow feeding the river with a recharge from the soil surface. A surface runoff event was simulated by a rise and recession of the water level in the river. Differences between summer and winter situation were explored by given representative temperatures to the different components of the river-aquifer system. The simulations show that the fluxes are very different along the riverbed. Even during steady state baseflow we see that the fluxes through the bottom were 2 to 3 times smaller as compared to the side banks. During the hydrographs the proportion can become up to 5 times. Another interesting result is that within the time frame of the hydrograph and its immediate recession relatively little water, which pentetrated in the aquifer, returns to the river. Most of the water replenishes the aquifer and there is only a very small rise of baseflow. In our simulation we returned to the original level as before the hydrograph, so in reality even less or no rise in baseflow may occur immediately after a hydrograph. Of course, in a longer time-frame the recharge of the aquifer will give a rise to the actual subsurface drainage. The change in seasonal temperatures within the river-aquifer system has a substantial effect. For identical river stage hydrograph changes the hyporheic exchange fluxes are more intense in summer than in winter. If we define the hyporheic zone as the extedn to which the water fluxes from the river can penetrate, then we see that this zone is wider on the sides as compared to the bottom of the

  10. The effects of AGN feedback and SPH formulation on black hole growth in galaxies

    NASA Astrophysics Data System (ADS)

    Liu, MaoSheng; Di Matteo, Tiziana; Feng, Yu

    2016-05-01

    We perform simulations of isolated galaxies and major mergers to investigate the effects on black hole (BH) growth due to variations in active galactic nuclei (AGN) feedback models and different smooth particle hydrodynamic (SPH) solvers. In particular we examine density-SPH versus newer pressure-SPH formulation and their significance relative to minor changes in subgrid AGN feedback prescriptions. The aim is to use these idealized simulations to understand the impact of these effects for large cosmological volume simulations where these models are often adopted. In both isolated galaxies and galaxy mergers, we find that star formation histories are largely insensitive to the choice of SPH schemes whilst BH accretion rate can change. This can result in a factor of 2-3 difference in final BH mass for the two hydrodynamic formulations. However, the differences are much smaller than those obtained even with small changes in the subgrid AGN feedback prescription. In particular, depending on the size of the region and the manner in which the AGN energy is deposited, the star formation rate is suppressed by a factor of 2 in isolated galaxies and the star burst completely quenched during the coalescence of two galaxies. The final BH mass differs by over an order of magnitude by changes in AGN feedback model. Our results indicated that any change in the hydrodynamic formulation is likely subdominant to the effects of changing subgrid physics around the BH, although thermodynamic state and morphology of the gas remnant are also sensitive to the change in hydrodynamic solver.

  11. Effects of Precipitation on Ocean Mixed-Layer Temperature and Salinity as Simulated in a 2-D Coupled Ocean-Cloud Resolving Atmosphere Model

    NASA Technical Reports Server (NTRS)

    Li, Xiaofan; Sui, C.-H.; Lau, K-M.; Adamec, D.

    1999-01-01

    A two-dimensional coupled ocean-cloud resolving atmosphere model is used to investigate possible roles of convective scale ocean disturbances induced by atmospheric precipitation on ocean mixed-layer heat and salt budgets. The model couples a cloud resolving model with an embedded mixed layer-ocean circulation model. Five experiment are performed under imposed large-scale atmospheric forcing in terms of vertical velocity derived from the TOGA COARE observations during a selected seven-day period. The dominant variability of mixed-layer temperature and salinity are simulated by the coupled model with imposed large-scale forcing. The mixed-layer temperatures in the coupled experiments with 1-D and 2-D ocean models show similar variations when salinity effects are not included. When salinity effects are included, however, differences in the domain-mean mixed-layer salinity and temperature between coupled experiments with 1-D and 2-D ocean models could be as large as 0.3 PSU and 0.4 C respectively. Without fresh water effects, the nocturnal heat loss over ocean surface causes deep mixed layers and weak cooling rates so that the nocturnal mixed-layer temperatures tend to be horizontally-uniform. The fresh water flux, however, causes shallow mixed layers over convective areas while the nocturnal heat loss causes deep mixed layer over convection-free areas so that the mixed-layer temperatures have large horizontal fluctuations. Furthermore, fresh water flux exhibits larger spatial fluctuations than surface heat flux because heavy rainfall occurs over convective areas embedded in broad non-convective or clear areas, whereas diurnal signals over whole model areas yield high spatial correlation of surface heat flux. As a result, mixed-layer salinities contribute more to the density differences than do mixed-layer temperatures.

  12. SU-E-T-35: An Investigation of the Accuracy of Cervical IMRT Dose Distribution Using 2D/3D Ionization Chamber Arrays System and Monte Carlo Simulation

    SciTech Connect

    Zhang, Y; Yang, J; Liu, H; Liu, D

    2014-06-01

    Purpose: The purpose of this work is to compare the verification results of three solutions (2D/3D ionization chamber arrays measurement and Monte Carlo simulation), the results will help make a clinical decision as how to do our cervical IMRT verification. Methods: Seven cervical cases were planned with Pinnacle 8.0m to meet the clinical acceptance criteria. The plans were recalculated in the Matrixx and Delta4 phantom with the accurate plans parameters. The plans were also recalculated by Monte Carlo using leaf sequences and MUs for individual plans of every patient, Matrixx and Delta4 phantom. All plans of Matrixx and Delta4 phantom were delivered and measured. The dose distribution of iso slice, dose profiles, gamma maps of every beam were used to evaluate the agreement. Dose-volume histograms were also compared. Results: The dose distribution of iso slice and dose profiles from Pinnacle calculation were in agreement with the Monte Carlo simulation, Matrixx and Delta4 measurement. A 95.2%/91.3% gamma pass ratio was obtained between the Matrixx/Delta4 measurement and Pinnacle distributions within 3mm/3% gamma criteria. A 96.4%/95.6% gamma pass ratio was obtained between the Matrixx/Delta4 measurement and Monte Carlo simulation within 2mm/2% gamma criteria, almost 100% gamma pass ratio within 3mm/3% gamma criteria. The DVH plot have slightly differences between Pinnacle and Delta4 measurement as well as Pinnacle and Monte Carlo simulation, but have excellent agreement between Delta4 measurement and Monte Carlo simulation. Conclusion: It was shown that Matrixx/Delta4 and Monte Carlo simulation can be used very efficiently to verify cervical IMRT delivery. In terms of Gamma value the pass ratio of Matrixx was little higher, however, Delta4 showed more problem fields. The primary advantage of Delta4 is the fact it can measure true 3D dosimetry while Monte Carlo can simulate in patients CT images but not in phantom.

  13. Explicit incompressible SPH algorithm for free-surface flow modelling: A comparison with weakly compressible schemes

    NASA Astrophysics Data System (ADS)

    Nomeritae; Daly, Edoardo; Grimaldi, Stefania; Bui, Ha Hong

    2016-11-01

    Several numerical schemes are available to simulate fluid flow with Smoothed Particles Hydrodynamics (SPH). Although commonly experiencing pressure fluctuations, schemes allowing for small changes in fluid density, referred to as weakly compressible (WCSPH and δ-SPH), are often used because of their faster computational time when compared to implicit incompressible schemes (IISPH). Explicit numerical schemes for incompressible fluid flow (EISPH), although more computationally efficient than IISPH, have not been largely used in the literature. To explore advantages and disadvantages of EISPH, this study compared an EISPH scheme with WCSPH and δ-SPH. The three schemes were compared for the case of still water and a wave generated by a dam-break. EISPH and δ-SPH were also compared for the case of a dam-break wave colliding with a vertical wall and a dam-break wave flowing over a wet bed. The three schemes performed similarly in reproducing theoretical and experimental results. EISPH led to results overall similar to WCSPH and δ-SPH, but with smoother pressure dynamics and faster computational times. EISPH presented some errors in the imposition of incompressibility, with the divergence of velocity being different from zero in parts of the fluid flow, especially near the surface. These errors in the divergence of velocity were comparable to the values of velocity divergence obtained with δ-SPH. In an attempt to reduce the velocity divergence in EISPH, an iterative procedure was implemented to calculate the pressure (iterative-EISPH). Although no real improvement was achieved in terms of velocity divergence, the pressure thus calculated was smoother and in some cases was closer to measured experimental values.

  14. Molecular Dynamics Simulations to Investigate the Influences of Amino Acid Mutations on Protein Three-Dimensional Structures of Cytochrome P450 2D6.1, 2, 10, 14A, 51, and 62.

    PubMed

    Fukuyoshi, Shuichi; Kometani, Masaharu; Watanabe, Yurie; Hiratsuka, Masahiro; Yamaotsu, Noriyuki; Hirono, Shuichi; Manabe, Noriyoshi; Takahashi, Ohgi; Oda, Akifumi

    2016-01-01

    Many natural mutants of the drug metabolizing enzyme cytochrome P450 (CYP) 2D6 have been reported. Because the enzymatic activities of many mutants are different from that of the wild type, the genetic polymorphism of CYP2D6 plays an important role in drug metabolism. In this study, the molecular dynamics simulations of the wild type and mutants of CYP2D6, CYP2D6.1, 2, 10, 14A, 51, and 62 were performed, and the predictions of static and dynamic structures within them were conducted. In the mutant CYP2D6.10, 14A, and 61, dynamic properties of the F-G loop, which is one of the components of the active site access channel of CYP2D6, were different from that of the wild type. The F-G loop acted as the "hatch" of the channel, which was closed in those mutants. The structure of CYP2D6.51 was not converged by the simulation, which indicated that the three-dimensional structure of CYP2D6.51 was largely different from that of the wild type. In addition, the intramolecular interaction network of CYP2D6.10, 14A, and 61 was different from that of the wild type, and it is considered that these structural changes are the reason for the decrease or loss of enzymatic activities. On the other hand, the static and dynamic properties of CYP2D6.2, whose activity was normal, were not considerably different from those of the wild type.

  15. Molecular Dynamics Simulations to Investigate the Influences of Amino Acid Mutations on Protein Three-Dimensional Structures of Cytochrome P450 2D6.1, 2, 10, 14A, 51, and 62

    PubMed Central

    Watanabe, Yurie; Hiratsuka, Masahiro; Yamaotsu, Noriyuki; Hirono, Shuichi; Manabe, Noriyoshi; Takahashi, Ohgi; Oda, Akifumi

    2016-01-01

    Many natural mutants of the drug metabolizing enzyme cytochrome P450 (CYP) 2D6 have been reported. Because the enzymatic activities of many mutants are different from that of the wild type, the genetic polymorphism of CYP2D6 plays an important role in drug metabolism. In this study, the molecular dynamics simulations of the wild type and mutants of CYP2D6, CYP2D6.1, 2, 10, 14A, 51, and 62 were performed, and the predictions of static and dynamic structures within them were conducted. In the mutant CYP2D6.10, 14A, and 61, dynamic properties of the F-G loop, which is one of the components of the active site access channel of CYP2D6, were different from that of the wild type. The F-G loop acted as the “hatch” of the channel, which was closed in those mutants. The structure of CYP2D6.51 was not converged by the simulation, which indicated that the three-dimensional structure of CYP2D6.51 was largely different from that of the wild type. In addition, the intramolecular interaction network of CYP2D6.10, 14A, and 61 was different from that of the wild type, and it is considered that these structural changes are the reason for the decrease or loss of enzymatic activities. On the other hand, the static and dynamic properties of CYP2D6.2, whose activity was normal, were not considerably different from those of the wild type. PMID:27046024

  16. Fractal and fractional calculus to model hydrological processes with application to particle-based 2D and 3D landslide simulation

    NASA Astrophysics Data System (ADS)

    Martelloni, Gianluca; Bagnoli, Franco; Di Cintio, Pierfrancesco

    2015-04-01

    We integrate existing soil infiltration modeling with particle based methods in order to simulate two and three-dimensional setups of triggered landslides. Commonly, the infiltration models are based on continuum schemes (e.g. Eulerian approach) by means of which it is possible to define the field of the pore pressure within a soil. By contrast, the particle based methods follow a Lagrangian scheme that allows one to identify the particle trajectories and their dynamical properties. In this work, in order to simulate the triggering mechanism, we apply the classical, fractal and fractional Richards equations and the Mohr-Coulomb failure criterion, adapted to the molecular dynamics technique. In our scheme the (local) positive pore pressure is simply implemented as a perturbation of the rest state of each grain. Therefore, the pore pressure function can be interpreted as a time-space dependent scalar field acting on each particle. To initialize the system we generate, using a molecular dynamics based algorithm, a mechanically stable disk (2D) or sphere (3D) packing simulating the consolidated soil. In this way, we can built the micro and macro pore structure related to different infiltration time scales. The inter-particle interactions are modeled with a Lennard-Jones like potential. The particle positions are updated in time, after and during a rainfall, with standard molecular dynamics. We analyze the sensitivity of the model with respect to the variation of some parameters such as hydraulic conductivity, cohesion, slope and friction angle, soil depth and fractional order of the generalized infiltration model. In addition, we consider both regular and random particle configurations. The results of our simulations are found to be in agreement with real landslides. In particular, the mean velocity patterns of the simulated landslides appear extremely similar to the observed ones. Moreover, it is possible to apply the method of the inverse surface displacement

  17. Evidence of downstream high speed jets by a non-stationary and rippled front of quasi-parallel shock: 2-D hybrid simulations

    NASA Astrophysics Data System (ADS)

    Hao, Yufei; Lu, Quanming; Lembege, Bertrand; Huang, Can; Wu, Mingyu; Guo, Fan; Shan, Lican; Zheng, Jian; Wang, Shui

    2015-04-01

    Experimental observations from space missions (including Cluster more recently) have clearly revealed the existence of high speed jets (HSJ) in the downstream region of the quasi-parallel terrestrial bow shock. Presently, two-dimensional (2-D) hybrid simulations are performed to reproduce and investigate the formation of such HSJ through a rippled quasi-parallel shock front. The simulation results show (i) that such shock fronts are strongly nonstationary (self reformation) along the shock normal, and (ii) that ripples are evidenced along the shock front as the upstream ULF waves (excited by interaction between incoming and reflected ions) are convected back to the front by the solar wind and contribute to the rippling formation. Then, these ripples are inherent structures of a quasi-parallel shock and the self reformation of the shock is not synchronous along the surface of the shock front. As a consequence, new incoming solar wind ions interact differently at different locations along the shock surface, and some can be only deflected (instead of being decelerated) at locations where ripples are large enough to play the role of local « secondary » shock. Therefore, the ion bulk velocity is also different locally after ions are transmitted dowstream, and local high-speed jets patterns are formed somewhere downstream. After a short reminder of main quasi-parallel shock features, this presentation will focus (i) on experimental observations of HSJ, (ii) on our preliminary simulation results obtained on HSJ, (iii) on their relationship with local bursty patterns of (turbulent) magnetic field evidenced at the front, and (iv) on the spatial and time scales of HSJ to be compared later on with experimental observations. Such downstream HSJ are shown to be generated by the nonstationary shock front itself and do not require any upstream perturbations (such as tangential/rotational discontinuity, HFA, etc..) to be convected by the solar wind and to interact with the shock

  18. Monte Carlo simulation of the dose response of a novel 2D silicon diode array for use in hybrid MRI–LINAC systems

    SciTech Connect

    Gargett, Maegan Rosenfeld, Anatoly; Oborn, Brad; Metcalfe, Peter

    2015-02-15

    Purpose: MRI-guided radiation therapy systems (MRIgRT) are being developed to improve online imaging during treatment delivery. At present, the operation of single point dosimeters and an ionization chamber array have been characterized in such systems. This work investigates a novel 2D diode array, named “magic plate,” for both single point calibration and 2D positional performance, the latter being a key element of modern radiotherapy techniques that will be delivered by these systems. Methods: GEANT4 Monte Carlo methods have been employed to study the dose response of a silicon diode array to 6 MV photon beams, in the presence of in-line and perpendicularly aligned uniform magnetic fields. The array consists of 121 silicon diodes (dimensions 1.5 × 1.5 × 0.38 mm{sup 3}) embedded in kapton substrate with 1 cm pitch, spanning a 10 × 10 cm{sup 2} area in total. A geometrically identical, water equivalent volume was simulated concurrently for comparison. The dose response of the silicon diode array was assessed for various photon beam field shapes and sizes, including an IMRT field, at 1 T. The dose response was further investigated at larger magnetic field strengths (1.5 and 3 T) for a 4 × 4 cm{sup 2} photon field size. Results: The magic plate diode array shows excellent correspondence (< ± 1%) to water dose in the in-line orientation, for all beam arrangements and magnetic field strengths investigated. The perpendicular orientation, however, exhibits a dose shift with respect to water at the high-dose-gradient beam edge of jaw-defined fields [maximum (4.3 ± 0.8)% over-response, maximum (1.8 ± 0.8)% under-response on opposing side for 1 T, uncertainty 1σ]. The trend is not evident in areas with in-field dose gradients typical of IMRT dose maps. Conclusions: A novel 121 pixel silicon diode array detector has been characterized by Monte Carlo simulation for its performance inside magnetic fields representative of current prototype and proposed MRI

  19. HYDRUS 2-D water balance simulations in a changing drift sand landscape: a realistic case from the last millennium in the Campine area, northern Belgium

    NASA Astrophysics Data System (ADS)

    Leterme, Bertrand; Beerten, Koen

    2013-04-01

    Climate, soils and vegetation are known to exert strong controls on the water balance in a given area. The role of geomorphological processes, however, is generally overlooked in hydrological studies. In this study, the impact of landscape evolution, including geomorphological processes, is being assessed using HYDRUS 2-D simulations. A realistic sequence of consecutive landscape development stages during the last millennium in the Campine area was taken to investigate the potential role of changing landscapes on the water balance. The sequence is based on a detailed landscape reconstruction of a small interfluve in the Nete basin (Campine area, northern Belgium), following a study of sediment-soil profiles using classical geomorphological techniques, optically stimulated luminescence dating, palynology and historical archives. At least four distinctive phases in the topography-soil-vegetation system have been identified: around ca. 1000 a BP, 500 a BP, 250 a BP and 150 a BP. The sequence is characterised by progressive destruction of the soil catena (podzol profile) and vegetation, and an overall increase in relief intensity due to heavy use of land, until the landscape became stabilized ca. 150 a BP. In parallel, soil hydraulic properties were measured and used for parameterization of the HYDRUS simulations. For each stage of the sequence, a two-dimensional landscape was drawn in HYDRUS-2D using the reconstructed information on vegetation, topography, soil horizons and soil hydraulic properties. The impact of changes in this geomorphological system on water balance was then evaluated by applying a 30-year time series of climate observations. Using the same recent climate data for the different stages allows to focus on the effect of geomorphological and land use changes on evapotranspiration, runoff and groundwater recharge. In general, the results show that soil development and/or erosion alone would have had only very limited impact on the water balance during

  20. 2D design rule and layout analysis using novel large-area first-principles-based simulation flow incorporating lithographic and stress effects

    NASA Astrophysics Data System (ADS)

    Prins, Steven L.; Blatchford, James; Olubuyide, Oluwamuyiwa; Riley, Deborah; Chang, Simon; Hong, Qi-Zhong; Kim, T. S.; Borges, Ricardo; Lin, Li

    2009-03-01

    As design rules and corresponding logic standard cell layouts continue to shrink node-on-node in accordance with Moore's law, complex 2D interactions, both intra-cell and between cells, become much more prominent. For example, in lithography, lack of scaling of λ/NA implies aggressive use of resolution enhancement techniques to meet logic scaling requirements-resulting in adverse effects such as 'forbidden pitches'-and also implies an increasing range of optical influence relative to cell size. These adverse effects are therefore expected to extend well beyond the cell boundary, leading to lithographic marginalities that occur only when a given cell is placed "in context" with other neighboring cells in a variable design environment [1]. This context dependence is greatly exacerbated by increased use of strain engineering techniques such as SiGe and dual-stress liners (DSL) to enhance transistor performance, both of which also have interaction lengths on the order of microns. The use of these techniques also breaks the formerly straightforward connection between lithographic 'shapes' and end-of-line electrical performance, thus making the formulation of design rules that are robust to process variations and complex 2D interactions more difficult. To address these issues, we have developed a first-principles-based simulation flow to study contextdependent electrical effects in layout, arising not only from lithography, but also from stress and interconnect parasitic effects. This flow is novel in that it can be applied to relatively large layout clips- required for context-dependent analysis-without relying on semi-empirical or 'black-box' models for the fundamental electrical effects. The first-principles-based approach is ideal for understanding contextdependent effects early in the design phase, so that they can be mitigated through restrictive design rules. The lithographic simulations have been discussed elsewhere [1] and will not be presented in detail. The

  1. Application of the SPH method to solitary wave impact on an offshore platform

    NASA Astrophysics Data System (ADS)

    Pan, K.; IJzermans, R. H. A.; Jones, B. D.; Thyagarajan, A.; van Beest, B. W. H.; Williams, J. R.

    2016-04-01

    This paper investigates the interaction between large waves and floating offshore structures. Here, the fluid-structure interaction is considered using the weakly compressible smoothed particle hydrodynamics (SPH) method. To ensure the applicability of this method, we validate its prediction for fluid forces and rigid-body motion against two sets of experimental data. These are impact due to dam break, and wave induced motion of a floating cube. For the dam break problem, the SPH method is used to predict impact forces on a rectangular column located downstream. In the second case of a floating cube, the SPH method simulates the motion of a buoyant cube under the action of induced waves, where a wall placed upstream of the cube is displaced sinusoidally to induce waves. In both cases, the SPH framework implemented is able to accurately reproduce the experimental results. Following validation, we apply this framework to simulation of a toy model of a tension-leg platform upon impact of a large solitary wave. This analysis shows that the platform may be pulled into the water by stretched tension legs, where the extension of the tension legs also governs the rotational behavior of the platform. The result also indicates that a tension-leg platform is very unlikely to topple over during the arrival of an extreme wave.

  2. Expression of transcription factors after short-term exposure of Arabidopsis thaliana cell cultures to hypergravity and simulated microgravity (2-D/3-D clinorotation, magnetic levitation)

    NASA Astrophysics Data System (ADS)

    Babbick, M.; Dijkstra, C.; Larkin, O. J.; Anthony, P.; Davey, M. R.; Power, J. B.; Lowe, K. C.; Cogoli-Greuter, M.; Hampp, R.

    Gravity is an important environmental factor that controls plant growth and development. Studies have shown that the perception of gravity is not only a property of specialized cells, but can also be performed by undifferentiated cultured cells. In this investigation, callus of Arabidopsis thaliana cv. Columbia was used to investigate the initial steps of gravity-related signalling cascades, through altered expression of transcription factors (TFs). TFs are families of small proteins that regulate gene expression by binding to specific promoter sequences. Based on microarray studies, members of the gene families WRKY, MADS-box, MYB, and AP2/EREBP were selected for investigation, as well as members of signalling chains, namely IAA 19 and phosphoinositol-4-kinase. Using qRT-PCR, transcripts were quantified within a period of 30 min in response to hypergravity (8 g), clinorotation [2-D clinostat and 3-D random positioning machine (RPM)] and magnetic levitation (ML). The data indicated that (1) changes in gravity induced stress-related signalling, and (2) exposure in the RPM induced changes in gene expression which resemble those of magnetic levitation. Two dimensional clinorotation resulted in responses similar to those caused by hypergravity. It is suggested that RPM and ML are preferable to simulate microgravity than clinorotation.

  3. Numerical simulation on the thermal radiative properties of a 2D SiO2/W/SiO2/W layered grating for thermophotovoltaic applications

    NASA Astrophysics Data System (ADS)

    Zhao, Yi; Fu, Ceji

    2016-10-01

    Tailoring the spectrum of thermal emission from the emitter is important for improving the performance of a thermophotovoltaic (TPV) system. In this work, a two-dimensional (2D) layered grating structure made of SiO2 and tungsten (W), which can realize wavelength-selective control of thermal emission, was proposed for a potential emitter in TPV applications. Numerical simulations of the spectral emissivity of the structure from the ultraviolet (UV) to the mid-infrared region reveals that the spectral-normal emissivity of the structure is enhanced to above 0.95 in the wavelength region from 0.55 μm to 1.9 μm for both TE and TM waves, but drops sharply at wavelength larger than 2 μm. Physical mechanisms responsible for the wavelength-selective emissivity were elucidated as due to resonance of magnetic polaritons (MPs) in the SiO2 spacer and in the grooves of the tungsten grating, Wood's anomaly (WA), excitation of surface plasmon polaritons (SPPs) and wave interference. Furthermore, the structure was found to exhibit quasi-diffuse and polarization-insensitive features of thermal emission, suggesting that the proposed structure can serve as the emitter in the design of high performance TPV systems.

  4. 2D FTLE in 3D Flows: The accuracy of using two-dimensional data for Lagrangian analysis in a three-dimensional turbulent channel simulation

    NASA Astrophysics Data System (ADS)

    Rockwood, Matthew; Green, Melissa

    2012-11-01

    In experimental, three-dimensional vortex-dominated flows, common particle image velocimetry (PIV) data is often collected in only the plane of interest due to equipment constraints. For flows with significant out of plane velocities or velocity gradients, this can create large discrepancies in Lagrangian analyses that require accurate particle trajectories. A Finite Time Lyapunov Exponent (FTLE) analysis is one such example, and has been shown to be very powerful at examining vortex dynamics and interactions in a variety of aperiodic flows. In this work, FTLE analysis of a turbulent channel simulation was conducted using both full three-dimensional velocity data and modified planar data extracted from the same computational domain. When the out of plane velocity component is neglected the difference in FTLE fields is non-trivial. A quantitative comparison and computation of error is presented for several planes across the width of the channel to determine the efficacy of using 2D analyses on the inherently 3D flows.

  5. Icarus: A 2D direct simulation Monte Carlo (DSMC) code for parallel computers. User`s manual - V.3.0

    SciTech Connect

    Bartel, T.; Plimpton, S.; Johannes, J.; Payne, J.

    1996-10-01

    Icarus is a 2D Direct Simulation Monte Carlo (DSMC) code which has been optimized for the parallel computing environment. The code is based on the DSMC method of Bird and models from free-molecular to continuum flowfields in either cartesian (x, y) or axisymmetric (z, r) coordinates. Computational particles, representing a given number of molecules or atoms, are tracked as they have collisions with other particles or surfaces. Multiple species, internal energy modes (rotation and vibration), chemistry, and ion transport are modelled. A new trace species methodology for collisions and chemistry is used to obtain statistics for small species concentrations. Gas phase chemistry is modelled using steric factors derived from Arrhenius reaction rates. Surface chemistry is modelled with surface reaction probabilities. The electron number density is either a fixed external generated field or determined using a local charge neutrality assumption. Ion chemistry is modelled with electron impact chemistry rates and charge exchange reactions. Coulomb collision cross-sections are used instead of Variable Hard Sphere values for ion-ion interactions. The electrostatic fields can either be externally input or internally generated using a Langmuir-Tonks model. The Icarus software package includes the grid generation, parallel processor decomposition, postprocessing, and restart software. The commercial graphics package, Tecplot, is used for graphics display. The majority of the software packages are written in standard Fortran.

  6. A novel 1D/2D model for simulating conjugate heat transfer applied to flow boiling in tubes with external fins

    NASA Astrophysics Data System (ADS)

    Ocłoń, Paweł; Łopata, Stanisław; Nowak, Marzena

    2014-09-01

    This study presents a novel, simplified model for the time-efficient simulation of transient conjugate heat transfer in round tubes. The flow domain and the tube wall are modeled in 1D and 2D, respectively and empirical correlations are used to model the flow domain in 1D. The model is particularly useful when dealing with complex physics, such as flow boiling, which is the main focus of this study. The tube wall is assumed to have external fins. The flow is vertical upwards. Note that straightforward computational fluid dynamics (CFD) analysis of conjugate heat transfer in a system of tubes, leads to 3D modeling of fluid and solid domains. Because correlation is used and dimensionality reduced, the model is numerically more stable and computationally more time-efficient compared to the CFD approach. The benefit of the proposed approach is that it can be applied to large systems of tubes as encountered in many practical applications. The modeled equations are discretized in space using the finite volume method, with central differencing for the heat conduction equation in the solid domain, and upwind differencing of the convective term of the enthalpy transport equation in the flow domain. An explicit time discretization with forward differencing was applied to the enthalpy transport equation in the fluid domain. The conduction equation in the solid domain was time discretized using the Crank-Nicholson scheme. The model is applied in different boundary conditions and the predicted boiling patterns and temperature fields are discussed.

  7. A novel 1D/2D model for simulating conjugate heat transfer applied to flow boiling in tubes with external fins

    NASA Astrophysics Data System (ADS)

    Ocłoń, Paweł; Łopata, Stanisław; Nowak, Marzena

    2015-04-01

    This study presents a novel, simplified model for the time-efficient simulation of transient conjugate heat transfer in round tubes. The flow domain and the tube wall are modeled in 1D and 2D, respectively and empirical correlations are used to model the flow domain in 1D. The model is particularly useful when dealing with complex physics, such as flow boiling, which is the main focus of this study. The tube wall is assumed to have external fins. The flow is vertical upwards. Note that straightforward computational fluid dynamics (CFD) analysis of conjugate heat transfer in a system of tubes, leads to 3D modeling of fluid and solid domains. Because correlation is used and dimensionality reduced, the model is numerically more stable and computationally more time-efficient compared to the CFD approach. The benefit of the proposed approach is that it can be applied to large systems of tubes as encountered in many practical applications. The modeled equations are discretized in space using the finite volume method, with central differencing for the heat conduction equation in the solid domain, and upwind differencing of the convective term of the enthalpy transport equation in the flow domain. An explicit time discretization with forward differencing was applied to the enthalpy transport equation in the fluid domain. The conduction equation in the solid domain was time discretized using the Crank-Nicholson scheme. The model is applied in different boundary conditions and the predicted boiling patterns and temperature fields are discussed.

  8. Melt-rock reaction in the asthenospheric mantle: Perspectives from high-order accurate numerical simulations in 2D and 3D

    NASA Astrophysics Data System (ADS)

    Tirupathi, S.; Schiemenz, A. R.; Liang, Y.; Parmentier, E.; Hesthaven, J.

    2013-12-01

    The style and mode of melt migration in the mantle are important to the interpretation of basalts erupted on the surface. Both grain-scale diffuse porous flow and channelized melt migration have been proposed. To better understand the mechanisms and consequences of melt migration in a heterogeneous mantle, we have undertaken a numerical study of reactive dissolution in an upwelling and viscously deformable mantle where solubility of pyroxene increases upwards. Our setup is similar to that described in [1], except we use a larger domain size in 2D and 3D and a new numerical method. To enable efficient simulations in 3D through parallel computing, we developed a high-order accurate numerical method for the magma dynamics problem using discontinuous Galerkin methods and constructed the problem using the numerical library deal.II [2]. Linear stability analyses of the reactive dissolution problem reveal three dynamically distinct regimes [3] and the simulations reported in this study were run in the stable regime and the unstable wave regime where small perturbations in porosity grows periodically. The wave regime is more relevant to melt migration beneath the mid-ocean ridges but computationally more challenging. Extending the 2D simulations in the stable regime in [1] to 3D using various combinations of sustained perturbations in porosity at the base of the upwelling column (which may result from a viened mantle), we show the geometry and distribution of dunite channel and high-porosity melt channels are highly correlated with inflow perturbation through superposition. Strong nonlinear interactions among compaction, dissolution, and upwelling give rise to porosity waves and high-porosity melt channels in the wave regime. These compaction-dissolution waves have well organized but time-dependent structures in the lower part of the simulation domain. High-porosity melt channels nucleate along nodal lines of the porosity waves, growing downwards. The wavelength scales

  9. Advanced Tsunami Numerical Simulations and Energy Considerations by use of 3D-2D Coupled Models: The October 11, 1918, Mona Passage Tsunami

    NASA Astrophysics Data System (ADS)

    López-Venegas, Alberto M.; Horrillo, Juan; Pampell-Manis, Alyssa; Huérfano, Victor; Mercado, Aurelio

    2015-06-01

    The most recent tsunami observed along the coast of the island of Puerto Rico occurred on October 11, 1918, after a magnitude 7.2 earthquake in the Mona Passage. The earthquake was responsible for initiating a tsunami that mostly affected the northwestern coast of the island. Runup values from a post-tsunami survey indicated the waves reached up to 6 m. A controversy regarding the source of the tsunami has resulted in several numerical simulations involving either fault rupture or a submarine landslide as the most probable cause of the tsunami. Here we follow up on previous simulations of the tsunami from a submarine landslide source off the western coast of Puerto Rico as initiated by the earthquake. Improvements on our previous study include: (1) higher-resolution bathymetry; (2) a 3D-2D coupled numerical model specifically developed for the tsunami; (3) use of the non-hydrostatic numerical model NEOWAVE (non-hydrostatic evolution of ocean WAVE) featuring two-way nesting capabilities; and (4) comprehensive energy analysis to determine the time of full tsunami wave development. The three-dimensional Navier-Stokes model tsunami solution using the Navier-Stokes algorithm with multiple interfaces for two fluids (water and landslide) was used to determine the initial wave characteristic generated by the submarine landslide. Use of NEOWAVE enabled us to solve for coastal inundation, wave propagation, and detailed runup. Our results were in agreement with previous work in which a submarine landslide is favored as the most probable source of the tsunami, and improvement in the resolution of the bathymetry yielded inundation of the coastal areas that compare well with values from a post-tsunami survey. Our unique energy analysis indicates that most of the wave energy is isolated in the wave generation region, particularly at depths near the landslide, and once the initial wave propagates from the generation region its energy begins to stabilize.

  10. SPH modeling of the Stickney impact at Phobos

    NASA Astrophysics Data System (ADS)

    Bruck Syal, Megan; Rovny, Jared; Owen, J. Michael; Miller, Paul L.

    2016-10-01

    Stickney crater stretches across nearly half the diameter of ~22-km Phobos, the larger of the two martian moons. The Stickney-forming impact would have had global consequences for Phobos, causing extensive damage to the satellite's interior and initiating large-scale resurfacing through ejecta blanket emplacement. Further, much of the ejected material that initially escaped the moon's tiny gravity (escape velocity of ~11 m/s) would have likely reimpacted on subsequent orbits. Modeling of the impact event is necessary to understand the conditions that allowed this "megacrater" to form without disrupting the entire satellite. Impact simulation results also provide a means to test several different hypotheses for how the mysterious families of parallel grooves may have formed at Phobos.We report on adaptive SPH simulations that successfully generate Stickney while avoiding catastrophic fragmentation of Phobos. Inclusion of target porosity and using sufficient numerical resolution in fully 3-D simulations are key for avoiding over-estimation of target damage. Cratering efficiency follows gravity-dominated scaling laws over a wide range of velocities (6-20 km/s) for the appropriate material constants. While the adaptive SPH results are used to constrain crater volume and fracture patterns within the target, additional questions about the fate of ejecta and final crater morphology within an unusual gravity environment can be addressed with complementary numerical methods. Results from the end of the hydrodynamics-controlled phase (tens of seconds after impact) are linked to a Discrete Element Method code, which can explore these processes over longer time scales (see Schwartz et al., this meeting).This work was performed under the auspices of the U.S. Department of Energy by Lawrence Livermore National Laboratory under Contract DE-AC52-07NA27344. LLNL-ABS-695442.

  11. 2D Simulations of Earthquake Cycles at a Subduction Zone Based on a Rate and State Friction Law -Effects of Pore Fluid Pressure Changes-

    NASA Astrophysics Data System (ADS)

    Mitsui, Y.; Hirahara, K.

    2006-12-01

    There have been a lot of studies that simulate large earthquakes occurring quasi-periodically at a subduction zone, based on the laboratory-derived rate-and-state friction law [eg. Kato and Hirasawa (1997), Hirose and Hirahara (2002)]. All of them assume that pore fluid pressure in the fault zone is constant. However, in the fault zone, pore fluid pressure changes suddenly, due to coseismic pore dilatation [Marone (1990)] and thermal pressurization [Mase and Smith (1987)]. If pore fluid pressure drops and effective normal stress rises, fault slip is decelerated. Inversely, if pore fluid pressure rises and effective normal stress drops, fault slip is accelerated. The effect of pore fluid may cause slow slip events and low-frequency tremor [Kodaira et al. (2004), Shelly et al. (2006)]. For a simple spring model, how pore dilatation affects slip instability was investigated [Segall and Rice (1995), Sleep (1995)]. When the rate of the slip becomes high, pore dilatation occurs and pore pressure drops, and the rate of the slip is restrained. Then the inflow of pore fluid recovers the pore pressure. We execute 2D earthquake cycle simulations at a subduction zone, taking into account such changes of pore fluid pressure following Segall and Rice (1995), in addition to the numerical scheme in Kato and Hirasawa (1997). We do not adopt hydrostatic pore pressure but excess pore pressure for initial condition, because upflow of dehydrated water seems to exist at a subduction zone. In our model, pore fluid is confined to the fault damage zone and flows along the plate interface. The smaller the flow rate is, the later pore pressure recovers. Since effective normal stress keeps larger, the fault slip is decelerated and stress drop becomes smaller. Therefore the smaller flow rate along the fault zone leads to the shorter earthquake recurrence time. Thus, not only the frictional parameters and the subduction rate but also the fault zone permeability affects the recurrence time of

  12. Precipitation Processes Developed During ARM (1997), TOGA COARE (1992), GATE (1974), SCSMEX (1998), and KWAJEX (1999): Consistent 2D, Semi-3D and 3D Cloud Resolving Model Simulations

    NASA Technical Reports Server (NTRS)

    Tao, W-K.

    2003-01-01

    Real clouds and cloud systems are inherently three-dimensional (3D). Because of the limitations in computer resources, however, most cloud-resolving models (CRMs) today are still two-dimensional (2D). A few 3D CRMs have been used to study the response of clouds to large-scale forcing. In these 3D simulations, the model domain was small, and the integration time was 6 hours. Only recently have 3D experiments been performed for multi-day periods for tropical cloud systems with large horizontal domains at the National Center for Atmospheric Research (NACAR) and at NASA Goddard Space Flight Center . At Goddard, a 3D Goddard Cumulus Ensemble (GCE) model was used to simulate periods during TOGA COARE, SCSMEX and KWAJEX using 512 by 512 km domain (with 2 km resolution). The results indicate that surface precipitation and latent heating profiles are very similar between the 2D and 3D GCE model simulations. The reason for the strong similarity between the 2D and 3D CRM simulations is that the same observed large-scale advective tendencies of potential temperature, water vapor mixing ratio, and horizontal momentum were used as the main focusing in both the 2D and 3D models. Interestingly, the 2D and 3D versions of the CRM used at CSU showed significant differences in the rainfall and cloud statistics for three ARM cases. The major objectives of this paper are: (1) to assess the performance of the super-parameterization technique, (2) calculate and examine the surface energy (especially radiation) and water budgets, and (3) identify the differences and similarities in the organization and entrainment rates of convection between simulated 2D and 3D cloud systems.

  13. galaxy formation and evolution with an improved SPH code

    NASA Astrophysics Data System (ADS)

    Zhu, Qirong; Li, Y.

    2014-01-01

    We present the results with an updated version of Gadget-3. Our improvements over the original version include both modifications on SPH algorithms and physical processes relevant to galaxy formation and evolution. A smoother kernel is used to reduce the noise of force calculation. Discontinuities and sub-sonic turbulence are treated with a time dependent conduction term and a time dependent viscosity term. The new code successfully handles the KH/RT instabilities. A new set of metal dependent cooling/heating functions is computed self-consistently to account for the ionizing UV background from galaxies and QSOs. Meanwhile we also updated the star formation model and black hole accretion model. With all of these improvement, our code can produce more realistic disk galaxies compared to previous work. Future simulations with this new code will give us more reliable results and enable us to better understand galaxy formation and evolution in greater detail and accuracy.

  14. Efficacy of very fast simulated annealing global optimization method for interpretation of self-potential anomaly by different forward formulation over 2D inclined sheet type structure

    NASA Astrophysics Data System (ADS)

    Biswas, A.; Sharma, S. P.

    2012-12-01

    best result without any ambiguity and smaller uncertainty. Keywords: SP anomaly, inclined sheet, 2D structure, forward problems, VFSA Optimization,

  15. Automated 3D-2D registration of X-ray microcomputed tomography with histological sections for dental implants in bone using chamfer matching and simulated annealing.

    PubMed

    Becker, Kathrin; Stauber, Martin; Schwarz, Frank; Beißbarth, Tim

    2015-09-01

    We propose a novel 3D-2D registration approach for micro-computed tomography (μCT) and histology (HI), constructed for dental implant biopsies, that finds the position and normal vector of the oblique slice from μCT that corresponds to HI. During image pre-processing, the implants and the bone tissue are segmented using a combination of thresholding, morphological filters and component labeling. After this, chamfer matching is employed to register the implant edges and fine registration of the bone tissues is achieved using simulated annealing. The method was tested on n=10 biopsies, obtained at 20 weeks after non-submerged healing in the canine mandible. The specimens were scanned with μCT 100 and processed for hard tissue sectioning. After registration, we assessed the agreement of bone to implant contact (BIC) using automated and manual measurements. Statistical analysis was conducted to test the agreement of the BIC measurements in the registered samples. Registration was successful for all specimens and agreement of the respective binary images was high (median: 0.90, 1.-3. Qu.: 0.89-0.91). Direct comparison of BIC yielded that automated (median 0.82, 1.-3. Qu.: 0.75-0.85) and manual (median 0.61, 1.-3. Qu.: 0.52-0.67) measures from μCT were significant positively correlated with HI (median 0.65, 1.-3. Qu.: 0.59-0.72) between μCT and HI groups (manual: R(2)=0.87, automated: R(2)=0.75, p<0.001). The results show that this method yields promising results and that μCT may become a valid alternative to assess osseointegration in three dimensions.

  16. Grid-Free 2D Plasma Simulations of the Complex Interaction Between the Solar Wind and Small, Near-Earth Asteroids

    NASA Technical Reports Server (NTRS)

    Zimmerman, M. I.; Farrell, W. M.; Poppe, A. R.

    2014-01-01

    We present results from a new grid-free 2D plasma simulation code applied to a small, unmagnetized body immersed in the streaming solar wind plasma. The body was purposely modeled as an irregular shape in order to examine photoemission and solar wind plasma flow in high detail on the dayside, night-side, terminator and surface-depressed 'pocket' regions. Our objective is to examine the overall morphology of the various plasma interaction regions that form around a small body like a small near-Earth asteroid (NEA). We find that the object obstructs the solar wind flow and creates a trailing wake region downstream, which involves the interplay between surface charging and ambipolar plasma expansion. Photoemission is modeled as a steady outflow of electrons from illuminated portions of the surface, and under direct illumination the surface forms a non-monotonic or ''double-sheath'' electric potential upstream of the body, which is important for understanding trajectories and equilibria of lofted dust grains in the presence of a complex asteroid geometry. The largest electric fields are found at the terminators, where ambipolar plasma expansion in the body-sized night-side wake merges seamlessly with the thin photoelectric sheath on the dayside. The pocket regions are found to be especially complex, with nearby sunlit regions of positive potential electrically connected to unlit negative potentials and forming adjacent natural electric dipoles. For objects near the surface, we find electrical dissipation times (through collection of local environmental solar wind currents) that vary over at least 5 orders of magnitude: from 39 Micro(s) inside the near-surface photoelectron cloud under direct sunlight to less than 1 s inside the particle-depleted night-side wake and shadowed pocket regions

  17. The numerical investigation of spreading process of two viscoelastic droplets impact problem by using an improved SPH scheme

    NASA Astrophysics Data System (ADS)

    Jiang, Tao; Lu, Lin-Guang; Lu, Wei-Gang

    2014-05-01

    In this paper, the spreading process of two XPP model droplets impacting on a plate in sequence at low Reynolds number is numerically simulated by using an improved smoothed particle hydrodynamics (I-SPH) method. The I-SPH method is a coupled approach which uses the traditional SPH (TSPH) method near the boundary domain and uses a kernel-gradient-corrected SPH method in the interior of fluid flow for the reason of remedying the accuracy and stability of TSPH. Meanwhile, an artificial stress term and a periodic density re-initialization technique are presented to eliminate the tensile instability and restrain pressure oscillation, respectively. A new boundary treatment is also adopted. The ability and merit of proposed I-SPH method combined with other techniques are first illustrated by simulating three typical examples. Subsequently, the deformation phenomena of two viscoelastic droplets impacting and spreading on a plate in sequence are numerically investigated. Particularly, the influences of the falling time interval, Weissenberg number and other rheological parameters on the deformation process are studied respectively. All numerical results agree well with the available data.

  18. Appropriate solid-body models as initial conditions for SPH-based numerical collision experiments

    NASA Astrophysics Data System (ADS)

    Burger, C.; Maindl, T. I.; Dvorak, R.; Schäfer, C.; Speith, R.

    2016-02-01

    Providing the simulation algorithm with suitable initial conditions is a crucial first step in almost all numerical computations, except for the most trivial cases. Even the most sophisticated simulation program will not produce meaningful results if not started with an appropriate initial configuration, satisfying demands like isotropy, a low level of noise and physical accuracy. Some of these requirements are unique to Smoothed Particle Hydrodynamics (SPH) - the numerical method considered here - others are of fundamental relevance, independent of the chosen numerical technique. The main focus of this work lies on considerations concerning initial conditions for subsequent SPH simulation runs. The geometrical arrangement of an initial SPH particle setup is discussed, particularly w.r.t. regular lattice configurations and associated symmetry effects. In order to avoid unphysical behavior the initial particle configuration has to be in a relaxed (i.e. equilibrated) state where necessary. This is of particular importance for simulations of giant collisions, where the involved bodies naturally exhibit a hydrostatic internal structure. Beyond the common numerical procedure, a semi-analytical approach for relaxation is introduced and validated, practically eliminating the need for spending significant amounts of valuable computing time solely for the production of a relaxed initial state in a lot of situations. Finally the basic relevance of relaxation itself is studied, focusing on collision simulations in different mass ranges important in the context of planet formation and the transport of water.

  19. Precipitation Processes developed during ARM (1997), TOGA COARE (1992), GATE (1974), SCSMEX (1998), and KWAJEX (1999), Consistent 2D, semi-3D and 3D Cloud Resolving Model Simulations

    NASA Technical Reports Server (NTRS)

    Tao, Wei-Kuo; Hou, A.; Atlas, R.; Starr, D.; Sud, Y.

    2003-01-01

    Real clouds and cloud systems are inherently three-dimensional (3D). Because of the limitations in computer resources, however, most cloud-resolving models (CRMs) today are still two-dimensional (2D). A few 3D CRMs have been used to study the response of clouds to large-scale forcing. In these 3D simulations, the model domain was small, and the integration time was 6 hours. The major objectives of this paper are: (1) to assess the performance of the super-parameterization technique (i.e. is 2D or semi-3D CRM appropriate for the super-parameterization?); (2) calculate and examine the surface energy (especially radiation) and water budgets; (3) identify the differences and similarities in the organization and entrainment rates of convection between simulated 2D and 3D cloud systems.

  20. An extension of Godunov SPH: Application to negative pressure media

    NASA Astrophysics Data System (ADS)

    Sugiura, Keisuke; Inutsuka, Shu-ichiro

    2016-03-01

    The modification of Smoothed Particle Hydrodynamics (SPH) method with Riemann Solver is called Godunov SPH. We further extend the Godunov SPH to the description of a medium with negative pressure. Under certain circumstances, the SPH method shows an unphysical instability that results in particle clustering. This instability is called the tensile instability. The tensile instability occurs in positive pressure regions in a regular fluid if a very large number of neighbor particles are used with certain shapes of kernel functions, and it is significant in negative pressure regions that emerge in stretched elastic bodies. We must suppress the tensile instability in SPH for calculations of elastic bodies. In this study, we develop a new technique to remove the tensile instability by extending the Godunov SPH method and conducting a linear stability analysis of the equation of motion for the extended method. We find that the tensile instability can be suppressed by choosing an appropriate order of interpolation in the equation of motion of the Godunov SPH method. We also derive an analytic solution for a Riemann solver for a simple equation of state of an elastic body, and construct a Godunov SPH method for the equation of state that allows negative pressure.

  1. rpSPH: a novel smoothed particle hydrodynamics algorithm

    NASA Astrophysics Data System (ADS)

    Abel, Tom

    2011-05-01

    We suggest a novel discretization of the momentum equation for smoothed particle hydrodynamics (SPH) and show that it significantly improves the accuracy of the obtained solutions. Our new formulation which we refer to as relative pressure SPH, rpSPH, evaluates the pressure force with respect to the local pressure. It respects Newton's first law of motion and applies forces to particles only when there is a net force acting upon them. This is in contrast to standard SPH which explicitly uses Newton's third law of motion continuously applying equal but opposite forces between particles. rpSPH does not show the unphysical particle noise, the clumping or banding instability, unphysical surface tension and unphysical scattering of different mass particles found for standard SPH. At the same time, it uses fewer computational operations and only changes a single line in existing SPH codes. We demonstrate its performance on isobaric uniform density distributions, uniform density shearing flows, the Kelvin-Helmholtz and Rayleigh-Taylor instabilities, the Sod shock tube, the Sedov-Taylor blast wave and a cosmological integration of the Santa Barbara galaxy cluster formation test. rpSPH is an improvement in these cases. The improvements come at the cost of giving up exact momentum conservation of the scheme. Consequently, one can also obtain unphysical solutions particularly at low resolutions.

  2. 2-D numerical simulations of groundwater flow, heat transfer and 4He transport — implications for the He terrestrial budget and the mantle helium heat imbalance

    NASA Astrophysics Data System (ADS)

    Castro, Maria Clara; Patriarche, Delphine; Goblet, Patrick

    2005-09-01

    Because helium and heat production results from a common source, a continental 4He crustal flux of 4.65 * 10 - 14 mol m - 2 s - 1 has been estimated based on heat flow considerations. In addition, because the observed mantle He / heat flux ratio at the proximity of mid-ocean ridges (6.6 * 10 - 14 mol J - 1 ) is significantly lower than the radiogenic production ratio (1.5 * 10 - 12 mol J - 1 ), the presence of a terrestrial helium-heat imbalance was suggested. The latter could be explained by the presence of a layered mantle in which removal of He is impeded from the lower mantle [R.K. O'Nions, E.R. Oxburgh, Heat and helium in the Earth, Nature 306 (1983) 429-431; E.R. Oxburgh, R.K. O'Nions, Helium loss, tectonics, and the terrestrial heat budget, Science 237 (1987) 1583-1588]. van Keken et al. [P.E. van Keken, C.J. Ballentine, D. Porcelli, A dynamical investigation of the heat and helium imbalance, Earth Planet, Sci. Lett. 188 (2001) 421-434] have recently claimed that the helium-heat imbalance remains a robust observation. Such conclusions, however, were reached under the assumption that a steady-state regime was in place for both tracers and that their transport properties are similar at least in the upper portion of the crust. Here, through 2-D simulations of groundwater flow, heat transfer and 4He transport carried out simultaneously in the Carrizo aquifer and surrounding formations in southwest Texas, we assess the legitimacy of earlier assumptions. Specifically, we show that the driving transport mechanisms for He and heat are of a fundamentally different nature for a high range of permeabilities ( k ≤ 10 - 16 m 2) found in metamorphic and volcanic rocks at all depths in the crust. The assumption that transport properties for these two tracers are similar in the crust is thus unsound. We also show that total 4He / heat flux ratios lower than radiogenic production ratios do not reflect a He deficit in the crust or mantle original reservoir. Instead, they

  3. Full-particle 2-D Simulations of the Ion Foreshock associated to a Supercritical Quasi-perpendicular Curved Collisionless Shock : Origin of Backstreaming Energetic Particles

    NASA Astrophysics Data System (ADS)

    Savoini, P.; Lembege, B.

    2014-12-01

    The ion foreshock located upstream of the Earth's bow shock is populated with ions reflected back by the shock front. In-situ spacecraft measurements have clearly established the existence of two distinct populations in the upstream of the quasi-perpendicular shock region (i.e. for 45o ≤ ΘBn≤ 90o, where ΘBn is the angle between the shock normal and the upstream magnetostatic field): (i) field-aligned ion beams (or 'FAB') characterized by a gyrotropic distribution, and (ii) gyro-phase bunched ions (or 'GPB') characterized by a NON gyrotropic distribution, which exhibits a non-vanishing perpendicular bulk velocity. The use of 2D PIC simulations where full curvature effects, time of flight effects and both electrons and ions dynamics are fully described, has evidenced that the shock front itself can be the possible source of these two characteristic populations. A recent analysis has evidenced that both populations can be discriminated in terms of interaction time (Δtinter) with the shock front. 'GPB' and 'FAB' populations are characterized by a short (Δtinter ~ 1 τci) and much larger (Δtinter ≥ 2 τci) interaction time respectively, where τci is the ion upstream gyroperiod. In addition, present statistical results evidence that: (i) backstreaming ions are splitted into 'FAB' and 'GPB' populations depending on their injection angle when hitting the shock front (defined between the local normal to the shock front and the gyration velocity vector). (ii) As a consequence, ion trajectories strongly differ between the 'FAB' and 'GPB' populations at the shock front. In particular, 'FAB' ions suffer multi-bounces along the curved front whereas 'GPB' ions make only one bounce. Such differences may explain why the 'FAB' population loses their gyro-phase coherency and become gyrotropic which is not the case for the 'GPB'. Then, the differences observed between 'FAB' and 'GPB' populations do not involve some distinct reflection processes as often claimed in the

  4. Aniso2D

    2005-07-01

    Aniso2d is a two-dimensional seismic forward modeling code. The earth is parameterized by an X-Z plane in which the seismic properties Can have monoclinic with x-z plane symmetry. The program uses a user define time-domain wavelet to produce synthetic seismograms anrwhere within the two-dimensional media.

  5. Towards 2D nanocomposites

    NASA Astrophysics Data System (ADS)

    Jang, Hyun-Sook; Yu, Changqian; Hayes, Robert; Granick, Steve

    2015-03-01

    Polymer vesicles (``polymersomes'') are an intriguing class of soft materials, commonly used to encapsulate small molecules or particles. Here we reveal they can also effectively incorporate nanoparticles inside their polymer membrane, leading to novel ``2D nanocomposites.'' The embedded nanoparticles alter the capacity of the polymersomes to bend and to stretch upon external stimuli.

  6. Flow analysis and validation of numerical modelling for a thin walled high pressure die casting using SPH

    NASA Astrophysics Data System (ADS)

    Cleary, Paul W.; Savage, Gary; Ha, Joseph; Prakash, Mahesh

    2014-09-01

    High pressure die casting (HPDC) is an important process for high throughput manufacturing of complex shaped metallic components. The flow involves significant fragmentation and spray formation as the high pressure liquid jets into the die from the gate system. An important class of die cast components is one with large areas of thin walls. An example of this is the chassis of the laptop computer. Computational modelling provides an opportunity to both better understand the filling process and to optimize the runner, gates, flash overs and venting systems for the die. SPH has previously been found to be very suitable for predicting HPDC for bulkier automotive components. The modelling challenges arising from the very thin sections and the many flow paths in a laptop chassis require careful validation. A water analogue experiment is used to validate the predictions of the SPH model for this representative thin walled casting. SPH predictions are used to understand and characterise the filling process. Finally, comparison of flow lines visible in an etched finished casting with the high speed flow paths in the final filled SPH model show very strong agreement. Together these demonstrate that such an SPH model is able to capture substantial detail from both the water analogue system and the actual casting process and is very suitable for simulating these types of complex thin walled castings.

  7. Turbulent fluid-structure interaction of water-entry/exit of a rotating circular cylinder using SPH method

    NASA Astrophysics Data System (ADS)

    Ghazanfarian, Jafar; Saghatchi, Roozbeh; Gorji-Bandpy, Mofid

    2015-12-01

    This paper studies the two-dimensional (2D) water-entry and exit of a rotating circular cylinder using the Sub-Particle Scale (SPS) turbulence model of a Lagrangian particle-based Smoothed-Particle Hydrodynamics (SPH) method. The full Navier-Stokes (NS) equations along with the continuity have been solved as the governing equations of the problem. The accuracy of the numerical code is verified using the case of water-entry and exit of a nonrotating circular cylinder. The numerical simulations of water-entry and exit of the rotating circular cylinder are performed at Froude numbers of 2, 5, 8, and specific gravities of 0.25, 0.5, 0.75, 1, 1.75, rotating at the dimensionless rates of 0, 0.25, 0.5, 0.75. The effect of governing parameters and vortex shedding behind the cylinder on the trajectory curves, velocity components in the flow field, and the deformation of free surface for both cases have been investigated in detail. It is seen that the rotation has a great effect on the curvature of the trajectory path and velocity components in water-entry and exit cases due to the interaction of imposed lift and drag forces with the inertia force.

  8. An SPH model for multiphase flows with complex interfaces and large density differences

    NASA Astrophysics Data System (ADS)

    Chen, Z.; Zong, Z.; Liu, M. B.; Zou, L.; Li, H. T.; Shu, C.

    2015-02-01

    In this paper, an improved SPH model for multiphase flows with complex interfaces and large density differences is developed. The multiphase SPH model is based on the assumption of pressure continuity over the interfaces and avoids directly using the information of neighboring particles' densities or masses in solving governing equations. In order to improve computational accuracy and to obtain smooth pressure fields, a corrected density re-initialization is applied. A coupled dynamic solid boundary treatment (SBT) is implemented both to reduce numerical oscillations and to prevent unphysical particle penetration in the boundary area. The density correction and coupled dynamics SBT algorithms are modified to adapt to the density discontinuity on fluid interfaces in multiphase simulation. A cut-off value of the particle density is set to avoid negative pressure, which can lead to severe numerical difficulties and may even terminate the simulations. Three representative numerical examples, including a Rayleigh-Taylor instability test, a non-Boussinesq problem and a dam breaking simulation, are presented and compared with analytical results or experimental data. It is demonstrated that the present SPH model is capable of modeling complex multiphase flows with large interfacial deformations and density ratios.

  9. Mesh2d

    2011-12-31

    Mesh2d is a Fortran90 program designed to generate two-dimensional structured grids of the form [x(i),y(i,j)] where [x,y] are grid coordinates identified by indices (i,j). The x(i) coordinates alone can be used to specify a one-dimensional grid. Because the x-coordinates vary only with the i index, a two-dimensional grid is composed in part of straight vertical lines. However, the nominally horizontal y(i,j0) coordinates along index i are permitted to undulate or otherwise vary. Mesh2d also assignsmore » an integer material type to each grid cell, mtyp(i,j), in a user-specified manner. The complete grid is specified through three separate input files defining the x(i), y(i,j), and mtyp(i,j) variations.« less

  10. A Comparison of SPH Artificial Viscosities and Their Impact on the Keplerian Disk

    NASA Astrophysics Data System (ADS)

    Hosono, Natsuki; Saitoh, Takayuki R.; Makino, Junichiro

    2016-06-01

    Hydrodynamical simulations of rotating disks play important roles in the field of astrophysical and planetary science. Smoothed particle hydrodynamics (SPH) has been widely used for such simulations. However, it has been known that when using SPH, a cold and thin Kepler disk breaks up due to the unwanted angular momentum transfer. Two possible reasons have been suggested for this breaking up of the disk; the artificial viscosity (AV) and the numerical error in the evaluation of pressure gradient in SPH. Which one is dominant is still unclear. In this paper, we investigate the reason for this rapid breaking up of the disk. We implemented most of the popular formulations of AV and switches, and measured the angular momentum transfer due to both AV and the error of SPH’s estimate of the pressure gradient. We found that the angular momentum transfer due to AV at the inner edge triggers the breaking up of the disk. We also found that the classical von Neumann-Richtmyer-Landshoff type AV with a high-order estimate for {{\

  11. A Comparison of SPH Artificial Viscosities and Their Impact on the Keplerian Disk

    NASA Astrophysics Data System (ADS)

    Hosono, Natsuki; Saitoh, Takayuki R.; Makino, Junichiro

    2016-06-01

    Hydrodynamical simulations of rotating disks play important roles in the field of astrophysical and planetary science. Smoothed particle hydrodynamics (SPH) has been widely used for such simulations. However, it has been known that when using SPH, a cold and thin Kepler disk breaks up due to the unwanted angular momentum transfer. Two possible reasons have been suggested for this breaking up of the disk; the artificial viscosity (AV) and the numerical error in the evaluation of pressure gradient in SPH. Which one is dominant is still unclear. In this paper, we investigate the reason for this rapid breaking up of the disk. We implemented most of the popular formulations of AV and switches, and measured the angular momentum transfer due to both AV and the error of SPH’s estimate of the pressure gradient. We found that the angular momentum transfer due to AV at the inner edge triggers the breaking up of the disk. We also found that the classical von Neumann–Richtmyer–Landshoff type AV with a high-order estimate for {{\

  12. AQUAgpusph, a new free 3D SPH solver accelerated with OpenCL

    NASA Astrophysics Data System (ADS)

    Cercos-Pita, J. L.

    2015-07-01

    In this paper, AQUAgpusph, a new free Smoothed Particle Hydrodynamics (SPH) software accelerated with OpenCL, is described. The main differences and progress with respect to other existing alternatives are considered. These are the use of the Open Computing Language (OpenCL) framework instead of the Compute Unified Device Architecture (CUDA), the implementation of the most popular boundary conditions, the easy customization of the code to different problems, the extensibility with regard to Python scripts, and the runtime output which allows the tracking of simulations in real time, or a higher frequency in saving some results without a significant performance lost. These modifications are shown to improve the solver speed, the results quality, and allow for a wider areas of application. AQUAgpusph has been designed trying to provide researchers and engineers with a valuable tool to test and apply the SPH method. Three practical applications are discussed in detail. The evolution of a dam break is used to quantify and compare the computational performance and modeling accuracy with the most popular SPH Graphics Processing Unit (GPU) accelerated alternatives. The dynamics of a coupled system, a Tuned Liquid Damper (TLD), is discussed in order to show the integration capabilities of the solver with external dynamics. Finally, the sloshing flow inside a nuclear reactor is simulated in order to show the capabilities of the solver to treat 3-D problems with complex geometries and of industrial interest.

  13. Stabilizing S.P.H. with conservative smoothing

    SciTech Connect

    Wen, Y.; Hicks, D.L.; Swegle, J.W.

    1994-08-01

    There is an instability in certain S.P.H. (Smoothed Particle Hydrodynamics method) material dynamics computations. Evidence from analyses and experiments suggests that the instabilities in S.P.H. are not removable with artificial viscosities. However, the analysis shows that a type of conservative smoothing does remove the instability. Also, numerical experiments, on certain test problems, show that SPHCS, and S.P.H. code with conservative smoothing, compares well in accuracy with computations based on the von Neumann-Richtmyer method.

  14. The 2D versus 3D imaging trade-off: The impact of over- or under-estimating small throats for simulating permeability in porous media

    NASA Astrophysics Data System (ADS)

    Peters, C. A.; Crandell, L. E.; Um, W.; Jones, K. W.; Lindquist, W. B.

    2011-12-01

    Geochemical reactions in the subsurface can alter the porosity and permeability of a porous medium through mineral precipitation and dissolution. While effects on porosity are relatively well understood, changes in permeability are more difficult to estimate. In this work, pore-network modeling is used to estimate the permeability of a porous medium using pore and throat size distributions. These distributions can be determined from 2D Scanning Electron Microscopy (SEM) images of thin sections or from 3D X-ray Computed Tomography (CT) images of small cores. Each method has unique advantages as well as unique sources of error. 3D CT imaging has the advantage of reconstructing a 3D pore network without the inherent geometry-based biases of 2D images but is limited by resolutions around 1 μm. 2D SEM imaging has the advantage of higher resolution, and the ability to examine sub-grain scale variations in porosity and mineralogy, but is limited by the small size of the sample of pores that are quantified. A pore network model was created to estimate flow permeability in a sand-packed experimental column investigating reaction of sediments with caustic radioactive tank wastes in the context of the Hanford, WA site. Before, periodically during, and after reaction, 3D images of the porous medium in the column were produced using the X2B beam line facility at the National Synchrotron Light Source (NSLS) at Brookhaven National Lab. These images were interpreted using 3DMA-Rock to characterize the pore and throat size distributions. After completion of the experiment, the column was sectioned and imaged using 2D SEM in backscattered electron mode. The 2D images were interpreted using erosion-dilation to estimate the pore and throat size distributions. A bias correction was determined by comparison with the 3D image data. A special image processing method was developed to infer the pore space before reaction by digitally removing the precipitate. The different sets of pore

  15. GRADSPMHD: A parallel MHD code based on the SPH formalism

    NASA Astrophysics Data System (ADS)

    Vanaverbeke, S.; Keppens, R.; Poedts, S.

    2014-03-01

    We present GRADSPMHD, a completely Lagrangian parallel magnetohydrodynamics code based on the SPH formalism. The implementation of the equations of SPMHD in the “GRAD-h” formalism assembles known results, including the derivation of the discretized MHD equations from a variational principle, the inclusion of time-dependent artificial viscosity, resistivity and conductivity terms, as well as the inclusion of a mixed hyperbolic/parabolic correction scheme for satisfying the ∇ṡB→ constraint on the magnetic field. The code uses a tree-based formalism for neighbor finding and can optionally use the tree code for computing the self-gravity of the plasma. The structure of the code closely follows the framework of our parallel GRADSPH FORTRAN 90 code which we added previously to the CPC program library. We demonstrate the capabilities of GRADSPMHD by running 1, 2, and 3 dimensional standard benchmark tests and we find good agreement with previous work done by other researchers. The code is also applied to the problem of simulating the magnetorotational instability in 2.5D shearing box tests as well as in global simulations of magnetized accretion disks. We find good agreement with available results on this subject in the literature. Finally, we discuss the performance of the code on a parallel supercomputer with distributed memory architecture. Catalogue identifier: AERP_v1_0 Program summary URL:http://cpc.cs.qub.ac.uk/summaries/AERP_v1_0.html Program obtainable from: CPC Program Library, Queen’s University, Belfast, N. Ireland Licensing provisions: Standard CPC licence, http://cpc.cs.qub.ac.uk/licence/licence.html No. of lines in distributed program, including test data, etc.: 620503 No. of bytes in distributed program, including test data, etc.: 19837671 Distribution format: tar.gz Programming language: FORTRAN 90/MPI. Computer: HPC cluster. Operating system: Unix. Has the code been vectorized or parallelized?: Yes, parallelized using MPI. RAM: ˜30 MB for a

  16. Modelling of tsunami wave run-up, breaking and impact on vertical wall by SPH method

    NASA Astrophysics Data System (ADS)

    Dao, M. H.; Xu, H.; Chan, E. S.; Tkalich, P.

    2013-06-01

    Accurate predictions of wave run-up and run-down are important for coastal impact assessment of relatively long waves such as tsunami or storm waves. Wave run-up is, however, a complex process involving nonlinear build-up of the wave front, intensive wave breaking and strong turbulent flow, making the numerical approximation challenging. Recent advanced modeling methodologies could help to overcome these numerical challenges. For a demonstration, we study run-up of non-breaking and breaking solitary waves on vertical wall using two methods, the enhanced Smoothed Particle Hydrodynamics (SPH) method and the traditional non-breaking nonlinear model Tunami-N2. The Tunami-N2 model fails to capture the evolution of steep waves at the proximity of breaking that observed in the experiments. Whereas, the SPH method successfully simulate the wave propagation, breaking, impact on structure and the reform and breaking processes of wave run-down. The study also indicates that inadequate approximation of the wave breaking could lead to significant under-predictions of wave height and impact pressure on structures. The SPH model shows potential applications for accurate impact assessments of wave run-up onto coastal structures.

  17. Direct collapse to supermassive black hole seeds: comparing the AMR and SPH approaches

    NASA Astrophysics Data System (ADS)

    Luo, Yang; Nagamine, Kentaro; Shlosman, Isaac

    2016-07-01

    We provide detailed comparison between the adaptive mesh refinement (AMR) code ENZO-2.4 and the smoothed particle hydrodynamics (SPH)/N-body code GADGET-3 in the context of isolated or cosmological direct baryonic collapse within dark matter (DM) haloes to form supermassive black holes. Gas flow is examined by following evolution of basic parameters of accretion flows. Both codes show an overall agreement in the general features of the collapse; however, many subtle differences exist. For isolated models, the codes increase their spatial and mass resolutions at different pace, which leads to substantially earlier collapse in SPH than in AMR cases due to higher gravitational resolution in GADGET-3. In cosmological runs, the AMR develops a slightly higher baryonic resolution than SPH during halo growth via cold accretion permeated by mergers. Still, both codes agree in the build-up of DM and baryonic structures. However, with the onset of collapse, this difference in mass and spatial resolution is amplified, so evolution of SPH models begins to lag behind. Such a delay can have effect on formation/destruction rate of H2 due to UV background, and on basic properties of host haloes. Finally, isolated non-cosmological models in spinning haloes, with spin parameter λ ˜ 0.01-0.07, show delayed collapse for greater λ, but pace of this increase is faster for AMR. Within our simulation set-up, GADGET-3 requires significantly larger computational resources than ENZO-2.4 during collapse, and needs similar resources, during the pre-collapse, cosmological structure formation phase. Yet it benefits from substantially higher gravitational force and hydrodynamic resolutions, except at the end of collapse.

  18. Antarctic ozone decrease: Possible impact on the seasonal and latitudinal distribution of total ozone as simulated by a 2-D model

    NASA Technical Reports Server (NTRS)

    Ko, Malcolm K. W.; Sze, Nien-Dak; Weisenstein, Debra K.; Rodriguez, Jose M.

    1988-01-01

    Satellite borne instruments, the Total Ozone Mapping Spectrometer (TOMS) and the Solar Backscatter Ultraviolet spectrometer (SBUV), show that total column ozone has decreased by more than 5 percent in the neighborhood of 60 S at all seasons since 1979. This is considerably larger than the decrease calculated by 2-D models which take into account solar flux variation and increases of trace gas concentrations over the same period. The meteorological conditions (warmer temperature and the apparent lack of polar stratospheric clouds) at these latitudes do not seem to favor heterogeneous chemistry as the direct cause for the observed ozone reduction. A mechanism involving the seasonal transport of ozone-poor air mass from within the polar vortex to lower latitudes (the so-called dilution effect) is proposed as a possible explanation for the observed year-round ozone reduction in regions away from the vortex.

  19. Towards the Identification of the Keeper Erosion Cause(s): Numerical Simulations of the Plasma and Neutral Gas Using the Global Cathode Model OrCa2D-II

    NASA Technical Reports Server (NTRS)

    Mikellides, Ioannis G.; Katz, Ira; Goebel, Dan M.; Jameson, Kristina K.

    2006-01-01

    Numerical simulations with the time-dependent Orificed Cathode (OrCa2D-II) computer code show that classical enhancements of the plasma resistivity can not account for the elevated electron temperatures and steep plasma potential gradients measured in the plume of a 25-27.5 A discharge hollow cathode. The cathode, which employs a 0.11-in diameter orifice, was operated at 5.5 sccm without an applied magnetic field using two different anode geometries. It is found that anomalous resistivity based on electron-driven instabilities improves the comparison between theory and experiment. It is also estimated that other effects such as the Hall-effect from the self-induced magnetic field, not presently included in OrCa2D-II, may contribute to the constriction of the current density streamlines thus explaining the higher plasma densities observed along the centerline.

  20. A new approach to reservoir heterogeneity modelling: conditional simulation of 2-D parasequences in shallow marine depositional systems using an attributed controlled grammar

    NASA Astrophysics Data System (ADS)

    Duan, Taizhong; Griffiths, Cedric M.; Johnsen, Sverre O.

    1999-07-01

    An attributed controlled grammar (ACG) has been formally used to represent the parasequences of a clastic shallow-marine system. The lithofacies distribution has been conditionally simulated in two dimensions using the ACG. In knowledge representation, the ACG has been shown to have several advantages over context-free, programmed and attributed grammars. The ACG for the parasequences is manually constructed by domain experts based on a conditioning dataset, combined with related sedimentological knowledge. The dataset includes several geological sections measured from outcrops and interpreted from boreholes. A parasequence is decomposed into coastal plain, foreshore, upper shoreface, lower shoreface and offshore facies tracts and their boundaries. Within each tract, lithofacies distribution is described by the facies transition relationship, which can be constructed directly from the dataset and adjusted in terms of related sedimentological knowledge. The boundaries between the tracts are represented by point chains, whereas the facies transitions are controlled by a transitional probability matrix and both vertical and horizontal extensions of the corresponding lithofacies. The simulation results show the following features: (1) the simulation honors the conditioning dataset, (2) the lithofacies distribution simulated from the ACG shows increased variability compared to traditional interpolations between geological sections and (3) the simulated lithofacies distribution is controlled mainly by the uncertainty of the vertical and horizontal extension of each lithofacies, which cannot usually be obtained directly from the conditional dataset, and is not formally considered in traditional geological correlation and interpretation. Work is underway to quantify such lateral and vertical extension in present-day systems.

  1. Solving microscopic flow problems using Stokes equations in SPH

    NASA Astrophysics Data System (ADS)

    Van Liedekerke, P.; Smeets, B.; Odenthal, T.; Tijskens, E.; Ramon, H.

    2013-07-01

    Starting from the Smoothed Particle Hydrodynamics method (SPH), we propose an alternative way to solve flow problems at a very low Reynolds number. The method is based on an explicit drop out of the inertial terms in the normal SPH equations, and solves the coupled system to find the velocities of the particles using the conjugate gradient method. The method will be called NSPH which refers to the non-inertial character of the equations. Whereas the time-step in standard SPH formulations for low Reynolds numbers is linearly restricted by the inverse of the viscosity and quadratically by the particle resolution, the stability of the NSPH solution benefits from a higher viscosity and is independent of the particle resolution. Since this method allows for a much higher time-step, it solves creeping flow problems with a high resolution and a long timescale up to three orders of magnitude faster than SPH. In this paper, we compare the accuracy and capabilities of the new NSPH method to canonical SPH solutions considering a number of standard problems in fluid dynamics. In addition, we show that NSPH is capable of modeling more complex physical phenomena such as the motion of a red blood cell in plasma.

  2. Glitter in a 2D monolayer.

    PubMed

    Yang, Li-Ming; Dornfeld, Matthew; Frauenheim, Thomas; Ganz, Eric

    2015-10-21

    We predict a highly stable and robust atomically thin gold monolayer with a hexagonal close packed lattice stabilized by metallic bonding with contributions from strong relativistic effects and aurophilic interactions. We have shown that the framework of the Au monolayer can survive 10 ps MD annealing simulations up to 1400 K. The framework is also able to survive large motions out of the plane. Due to the smaller number of bonds per atom in the 2D layer compared to the 3D bulk we observe significantly enhanced energy per bond (0.94 vs. 0.52 eV per bond). This is similar to the increase in bond strength going from 3D diamond to 2D graphene. It is a non-magnetic metal, and was found to be the global minima in the 2D space. Phonon dispersion calculations demonstrate high kinetic stability with no negative modes. This 2D gold monolayer corresponds to the top monolayer of the bulk Au(111) face-centered cubic lattice. The close-packed lattice maximizes the aurophilic interactions. We find that the electrons are completely delocalized in the plane and behave as 2D nearly free electron gas. We hope that the present work can inspire the experimental fabrication of novel free standing 2D metal systems.

  3. Finite difference time domain method for calculating the band structure of a 2D photonic crystal and simulating the lensing effect

    NASA Astrophysics Data System (ADS)

    Rafiee Dastjerdi, S.; Ghanaatshoar, M.

    2013-08-01

    A finite difference time domain method based on regular Yee's algorithm in an orthogonal coordinate system is utilized to calculate the band structure of a two-dimensional square-lattice photonic crystal comprising dielectric cylinders in air background and to simulate the image formation of mentioned structure incorporating the perfectly matched layer boundary condition. By analyzing the photonic band diagram of this system, we find that the frequency region of effective negative refraction exists in the second band in near-infrared domain. In this case, electromagnetic wave propagates with a negative phase velocity and the evanescent waves can be supported to perform higher image resolution.

  4. Efficient Quantum Simulations of Metals within the Γ-Point Approximation: Application to Carbon and Inorganic 1D and 2D Materials.

    PubMed

    Ghorbani-Asl, Mahdi; Juarez-Mosqueda, Rosalba; Kuc, Agnieszka; Heine, Thomas

    2012-08-14

    Molecular dynamics simulations using quantum mechanics for the electronic system, i.e., within the Born-Oppenheimer or related Car-Parrinello approximation, became feasible and popular in recent years for very large systems. The most common setup for these simulations is the supercell method in conjunction with the Γ-point approximation. Here we provide a tool which is useful to choose the supercell of the considered system such that it makes it appear to have either an as large as possible band gap (optimized for Car-Parrinello setup) or the metallic character reflected at the Γ point (e.g., fold the Dirac point to the Γ point for graphene and carbon nanotubes) in order to monitor the metallic character in a trajectory. We address carbon nanotubes, graphene, and inorganic TS2 analogues with T = Re, Nb. We further provide a simple Hückel code, which allows checking the electronic states close to the Fermi level within the Γ-point approximation, and we test its predictions against the density-functional-based tight-binding approach.

  5. Origin of the Ion Foreshock in a Quasi-perpendicular Curved Collisionless Shock: Particles Trajectory Analysis in 2D PIC Simulations

    NASA Astrophysics Data System (ADS)

    Savoini, P.; Lembege, B.

    2015-12-01

    The ion foreshock located upstream of the Earth's shock wave is populated with ions having interacted with the shock, and then, reflected back with an high energy gain. Spacecrafts have clearly established the existence of two distinct populations in the quasi-perpendicular shock region (i.e. for 45° ≤ ΘBn ≤ 90°, where ΘBn is the angle between the shock normal and the upstream magnetic field) : (i) field-aligned ion beams or « FAB » characterized by a gyrotropic distribution, and (ii) gyro-phase bunched ions or « GPB » characterized by a NON gyrotropic distribution. One of the important unresolved problem is the exact origin of the particles contributing to these two populations. To our knowledge, it was the first time that full-particle simulations have been performed including self-consistently the shock front curvature and nonstationarity, and the time-of-flight effects. Our analysis evidences that these two backstreaming populations may be reflected by the front itself and can be differentiated both in terms of interaction time and trajectory within the shock front. In particular, simulations evidence that "GPB" population is characterized by a short interaction time (ΔTinter = 1 to 2 τci) while the "FAB" population corresponds to a much larger time range (from 1 τci to 10 τci), where tci is the upstream ion gyroperiod. Present individual ion trajectories evidence that "FAB" population shows a strong perpendicular drift at the shock front (i.e. strong dependence of the pitch angle to the perpendicular velocity) whereas the "GPB" population shows no perpendicular drift (i.e. its pitch angle is mainly driven by the parallel velocity). Such differences explain why the "FAB" population loses their gyro-phase coherency and become gyrotropic which is not the case for the "GPB". This important result was not expected and greatly simplifies the question of their origin.

  6. Influence of Intrusive vs. Extrusive Magmatism on Venus' Tectonics and long-term Mantle Evolution: 2D and 3D Simulations

    NASA Astrophysics Data System (ADS)

    Tackley, P. J.

    2014-12-01

    Here we extend the numerical convection models of Venus models of [1], which included melting, magmatism, decaying heat-producing elements, core cooling, realistic temperature-dependent viscosity and either stagnant lid or episodic lithospheric overturn. In [1] it was found that for stagnant lid convection the dominant mode of heat loss is magmatic heat pipe, which requires massive magmatism and produces very thick, cold crust, inconsistent with observations. In contrast, episodic lid overturn interspersed by periods of quiescence effectively loses Venus's heat while giving lower rates of volcanism and a thinner crust. Calculations predict 5-8 overturn events over Venus's history, each lasting ˜150 Myr, initiating in one place and then spreading globally. Venus-like amplitudes of topography and geoid can be produced in either stagnant or episodic modes, with a viscosity profile that is Earth-like but shifted to higher values. Here we extend [1] by considering intrusive magmatism as an alternative to the purely extrusive magmatism previously assumed. Intrusive magmatism warms and weakens the crust, resulting in substantial surface deformation and a thinner crust. This is further enhanced by using a basaltic rheology for the crust instead of assuming the same rheological parameters as for the mantle. In some cases massive intrusive magmatism can even lead to episodic lithospheric overturn events without plastic yielding. Here we quantitatively analyse the resulting surface deformation and other signatures, and compare to observations in order to constrain the likely ratio of intrusive to extrusive magmatism. [1] Armann, M., and P. J. Tackley (2012), Simulating the thermochemical magmatic and tectonic evolution of Venus's mantle and lithosphere: Two-dimensional models, J. Geophys. Res., 117, E12003, doi:10.1029/2012JE004231.

  7. Intrusive Magmatism on Venus can lead to a weak crust and episodic overturn events: Spherical 2D and 3D Simulations

    NASA Astrophysics Data System (ADS)

    Tackley, Paul

    2015-04-01

    Here we extend the numerical convection models of Venus models of [1], which included melting, magmatism, decaying heat-producing elements, core cooling, realistic temperature-dependent viscosity and either stagnant lid or episodic lithospheric overturn. In [1] it was found that for stagnant lid convection the dominant mode of heat loss is magmatic heat pipe, which requires massive magmatism and produces very thick, cold crust, inconsistent with observations. In contrast, episodic lid overturn interspersed by periods of quiescence effectively loses Venus's heat while giving lower rates of volcanism and a thinner crust. Calculations predict 5-8 overturn events over Venus's history, each lasting ˜150 Myr, initiating in one place and then spreading globally. Venus-like amplitudes of topography and geoid can be produced in either stagnant or episodic modes, with a viscosity profile that is Earth-like but shifted to higher values. Here we extend [1] by considering intrusive magmatism as an alternative to the purely extrusive magmatism previously assumed. Intrusive magmatism warms and weakens the crust, resulting in substantial surface deformation and a thinner crust. This is further enhanced by using a basaltic rheology for the crust instead of assuming the same rheological parameters as for the mantle. In some cases massive intrusive magmatism can even lead to episodic lithospheric overturn events without plastic yielding. Here we quantitatively analyse the resulting surface deformation and other signatures, and compare to observations in order to constrain the likely ratio of intrusive to extrusive magmatism. [1] Armann, M., and P. J. Tackley (2012), Simulating the thermochemical magmatic and tectonic evolution of Venus's mantle and lithosphere: Two-dimensional models, J. Geophys. Res., 117, E12003, doi:10.1029/2012JE004231.

  8. Pitot survey of exhaust flow field of a 2-D scramjet nozzle at Mach 6 with air or freon and argon used for exhaust simulation

    NASA Technical Reports Server (NTRS)

    Monta, William J.

    1992-01-01

    A pitot-rake survey of the simulated exhaust of a half-span scramjet nozzle model was conducted in the Langley 20-Inch Mach 6 Tunnel to provide an additional data set for computational fluid dynamics (CFD) code comparisons. A wind-tunnel model was tested with a 26-tube pitot rake that could be manually positioned along the mid-semispan plane of the model. The model configuration had an external expansion surface of 20 degrees and an internal cowl expansion of 12 degrees; tests were also performed with a flow fence. Tests were conducted at a free-stream Reynolds number of approximately 6.5 x 10(exp 6) per foot and a model angle of attack of -0.75 degrees. The two exhaust gas mediums that were tested were air and a Freon 12-argon mixture. Each medium was tested at two jet total pressures at approximately 28 and 14 psia. This document presents the flow-field survey results in graphical as well as tabular form, and several observations concerning the results are discussed. The surveys reveal the major expected flow-field characteristics for each test configuration. For a 50-percent freon 12 and 50-percent argon mixture by volume (Fr-Ar), the exhaust jet pressures were slightly higher than those for air. The addition of a flow fence slightly raised the pitot pressure for the Fr-Ar mixture, but it produced little change for air. For the Fr-Ar exhaust, the plume was larger and the region between the shock wave and plume was smaller.

  9. WFR-2D: an analytical model for PWAS-generated 2D ultrasonic guided wave propagation

    NASA Astrophysics Data System (ADS)

    Shen, Yanfeng; Giurgiutiu, Victor

    2014-03-01

    This paper presents WaveFormRevealer 2-D (WFR-2D), an analytical predictive tool for the simulation of 2-D ultrasonic guided wave propagation and interaction with damage. The design of structural health monitoring (SHM) systems and self-aware smart structures requires the exploration of a wide range of parameters to achieve best detection and quantification of certain types of damage. Such need for parameter exploration on sensor dimension, location, guided wave characteristics (mode type, frequency, wavelength, etc.) can be best satisfied with analytical models which are fast and efficient. The analytical model was constructed based on the exact 2-D Lamb wave solution using Bessel and Hankel functions. Damage effects were inserted in the model by considering the damage as a secondary wave source with complex-valued directivity scattering coefficients containing both amplitude and phase information from wave-damage interaction. The analytical procedure was coded with MATLAB, and a predictive simulation tool called WaveFormRevealer 2-D was developed. The wave-damage interaction coefficients (WDICs) were extracted from harmonic analysis of local finite element model (FEM) with artificial non-reflective boundaries (NRB). The WFR-2D analytical simulation results were compared and verified with full scale multiphysics finite element models and experiments with scanning laser vibrometer. First, Lamb wave propagation in a pristine aluminum plate was simulated with WFR-2D, compared with finite element results, and verified by experiments. Then, an inhomogeneity was machined into the plate to represent damage. Analytical modeling was carried out, and verified by finite element simulation and experiments. This paper finishes with conclusions and suggestions for future work.

  10. Influence of Intrusive vs. Extrusive Magmatism on Venus' Tectonics and long-term Mantle Evolution: 2D and 3D Simulations

    NASA Astrophysics Data System (ADS)

    Tackley, Paul

    2014-05-01

    magmatism as an alternative to the purely extrusive magmatism assumed in [1]. Intrusive magmatism warms and weakens the crust, resulting in substantial surface deformation and a thinner crust. This is further enhanced by using a basaltic rheology for the crust instead of assuming the same rheological parameters as for the mantle. Here we quantitatively analyse the resulting surface deformation and other signatures, and compare to observations in order to constrain the likely ratio of intrusive to extrusive magmatism. [1] Armann, M., and P. J. Tackley (2012), Simulating the thermochemical magmatic and tectonic evo- lution of Venus's mantle and lithosphere: Two-dimensional models, J. Geophys. Res., 117, E12003, doi:10.1029/2012JE004231.

  11. On the SPH Approximations in Modeling Water Waves

    NASA Astrophysics Data System (ADS)

    Szmidt, Kazimierz

    2014-10-01

    This paper presents an examination of approximation aspects of the Smoothed Particle Hydrodynamics (SPH) in modeling the water wave phenomenon. Close attention is paid on consistency of the SPH formulation and its relation with a correction technique applied to improve the method accuracy. The considerations are confined to flow fields within finite domains with a free surface and fixed solid boundaries with free slip boundary conditions. In spite of a wide application of the SPH method in fluid mechanics, the appropriate modeling of the boundaries is still not clear. For solid straight line boundaries, a natural way is to use additional (virtual, ghost) particles outside the boundary and take into account mirror reflection of associated field variables. Such a method leads to good results, except for a vicinity of solid horizontal bottoms where, because of the SPH approximations in the description of pressure, a stratification of the fluid material particles may occur. In order to illustrate the last phenomenon, some numerical tests have been made. These numerical experiments show that the solid fluid bottom attracts the material particles and thus, to prevent these particles from penetration into the bottom, a mutual exchange of positions of real and ghost particles has been used in a computation procedure.

  12. Tsunami Simulator Integrating the Smoothed-Particle Hydrodynamics Method and the Nonlinear Shallow Water Wave Model with High Performance Computer

    NASA Astrophysics Data System (ADS)

    Suwa, T.; Imamura, F.; Sugawara, D.; Ogasawara, K.; Watanabe, M.; Hirahara, T.

    2014-12-01

    A tsunami simulator integrating a 3-D fluid simulation technology that runs on large-scale parallel computers using smoothed-particle hydrodynamics (SPH) method has been developed together with a 2-D tsunami propagation simulation technique using a nonlinear shallow water wave model. We use the 2-D simulation to calculate tsunami propagation of scale of about 1000km from epicenter to near shore. The 3-D SPH method can be used to calculate the water surface and hydraulic force that a tsunami can exert on a building, and to simulate flooding patterns at urban area of at most km scale. With our simulator we can also see three dimensional fluid feature such as complex changes a tsunami undergoes as it interacts with coastal topography or structures. As a result it is hoped that, e.g. , effect of the structures to dissipate waves energy passing over it can be elucidated. The authors utilize the simulator in the third of five fields of the Strategic Programs for Innovative Research, "Advanced Prediction Researches for Natural Disaster Prevention and Reduction," or the theme "Improvement of the tsunami forecasting system on the HPCI computer." The results of tsunami simulation using the K computer will be reported. We are going to apply it to a real problem of the disaster prevention in future.

  13. Investigation of wall bounded flows using SPH and the unified semi-analytical wall boundary conditions

    NASA Astrophysics Data System (ADS)

    Mayrhofer, Arno; Rogers, Benedict D.; Violeau, Damien; Ferrand, Martin

    2013-11-01

    Semi-analytical wall boundary conditions present a mathematically rigorous framework to prescribe the influence of solid walls in smoothed particle hydrodynamics (SPH) for fluid flows. In this paper they are investigated with respect to the skew-adjoint property which implies exact energy conservation. It will be shown that this property holds only in the limit of the continuous SPH approximation, whereas in the discrete SPH formulation it is only approximately true, leading to numerical noise. This noise, interpreted as a form of "turbulence", is treated using an additional volume diffusion term in the continuity equation which we show is equivalent to an approximate Riemann solver. Subsequently two extensions to the boundary conditions are presented. The first dealing with a variable driving force when imposing a volume flux in a periodic flow and the second showing a generalization of the wall boundary condition to Robin type and arbitrary-order interpolation. Two modifications for free-surface flows are presented for the volume diffusion term as well as the wall boundary condition. In order to validate the theoretical constructs numerical experiments are performed showing that the present volume flux term yields results with an error 5 orders of magnitude smaller then previous methods while the Robin boundary conditions are imposed correctly with an error depending on the order of the approximation. Furthermore, the proposed modifications for free-surface flows improve the behavior at the intersection of free surface and wall as well as prevent free-surface detachment when using the volume diffusion term. Finally, this paper is concluded by a simulation of a dam break over a wedge demonstrating the improvements proposed in this paper.

  14. Nano-indentation study on the (001) face of KDP crystal based on SPH method

    NASA Astrophysics Data System (ADS)

    Xiaoguang, Guo; Ziyuan, Liu; Hang, Gao; Dongming, Guo

    2015-08-01

    In order to avoid the defects of mesh distortion when dealing with large deformation problems through using the finite element method, a mess-free simulation method—smooth particle hydrodynamics (SPH) has been introduced. The material constitutive model of KDP crystal has been established based on the elastic-plastic theory. Then the nano-indentation on the (001) face of KDP crystal has been carried out using SPH method. Simulation results show that the maximum equivalent stress and the maximum plastic strain concentrate on the area that located near the tip of the indenter during the loading process. The distribution shape of Von Mises stress is similar to concentric circles. During the unloading process, no obvious variation of plastic strain distribution exists. The maximum Von Mises stress is mainly located at the indentation and its edge at the end of the unloading process. The approximate direct proportion relationship between the maximum indentation depth and the depth of the maximum Von Mises stress distribution has been discovered when the maximum load is lower than 8 mN. In addition, the nano-indentation experiments on KDP crystal's (001) face have been carried out. Both the material parameters and the adjusted stress-strain curve have been verified. The hindering role of the affected layer has been found and analyzed. Project supported by the National Basic Research Program of China (No. 51135002), and the Science Fund for Creative Research Groups (No. 51321004).

  15. SPH-DCDEM model for arbitrary geometries in free surface solid-fluid flows

    NASA Astrophysics Data System (ADS)

    Canelas, Ricardo B.; Crespo, Alejandro J. C.; Domínguez, Jose M.; Ferreira, Rui M. L.; Gómez-Gesteira, Moncho

    2016-05-01

    A unified discretization of rigid solids and fluids is introduced, allowing for resolved simulations of fluid-solid phases within a meshless framework. The numerical solution, attained by Smoothed Particle Hydrodynamics (SPH) and a variation of Discrete Element Method (DEM), the Distributed Contact Discrete Element Method (DCDEM) discretization, is achieved by directly considering solid-solid and solid-fluid interactions. The novelty of the work is centred on the generalization of the coupling of the DEM and SPH methodologies for resolved simulations, allowing for state-of-the-art contact mechanics theories to be used in arbitrary geometries, while fluid to solid and vice versa momentum transfers are accurately described. The methods are introduced, analysed and discussed. Initial validations on the DCDEM and the fluid coupling are presented, drawing from test cases in the literature. An experimental campaign serves as a validation point for complex, large scale solid-fluid flows, where a set of blocks in several configurations is subjected to a dam-break wave. Blocks are tracked and positions are then compared between experimental data and the numerical solutions. A Particle Image Velocimetry (PIV) technique allows for the quantification of the flow field and direct comparison with numerical data. The results show that the model is accurate and is capable of treating highly complex interactions, such as transport of debris or hydrodynamic actions on structures, if relevant scales are reproduced.

  16. Ultrafast 2D IR microscopy

    PubMed Central

    Baiz, Carlos R.; Schach, Denise; Tokmakoff, Andrei

    2014-01-01

    We describe a microscope for measuring two-dimensional infrared (2D IR) spectra of heterogeneous samples with μm-scale spatial resolution, sub-picosecond time resolution, and the molecular structure information of 2D IR, enabling the measurement of vibrational dynamics through correlations in frequency, time, and space. The setup is based on a fully collinear “one beam” geometry in which all pulses propagate along the same optics. Polarization, chopping, and phase cycling are used to isolate the 2D IR signals of interest. In addition, we demonstrate the use of vibrational lifetime as a contrast agent for imaging microscopic variations in molecular environments. PMID:25089490

  17. SPH accuracy improvement through the combination of a quasi-Lagrangian shifting transport velocity and consistent ALE formalisms

    NASA Astrophysics Data System (ADS)

    Oger, G.; Marrone, S.; Le Touzé, D.; de Leffe, M.

    2016-05-01

    This paper addresses the accuracy of the weakly-compressible SPH method. Interpolation defects due to the presence of anisotropic particle structures inherent to the Lagrangian character of the Smoothed Particle Hydrodynamics (SPH) method are highlighted. To avoid the appearance of these structures which are detrimental to the quality of the simulations, a specific transport velocity is introduced and its inclusion within an Arbitrary Lagrangian Eulerian (ALE) formalism is described. Unlike most of existing particle disordering/shifting methods, this formalism avoids the formation of these anisotropic structures while a full consistency with the original Euler or Navier-Stokes equations is maintained. The gain in accuracy, convergence and numerical diffusion of this formalism is shown and discussed through its application to various challenging test cases.

  18. Documentation and verification of VST2D; a model for simulating transient, Variably Saturated, coupled water-heat-solute Transport in heterogeneous, anisotropic 2-Dimensional, ground-water systems with variable fluid density

    USGS Publications Warehouse

    Friedel, Michael J.

    2001-01-01

    This report describes a model for simulating transient, Variably Saturated, coupled water-heatsolute Transport in heterogeneous, anisotropic, 2-Dimensional, ground-water systems with variable fluid density (VST2D). VST2D was developed to help understand the effects of natural and anthropogenic factors on quantity and quality of variably saturated ground-water systems. The model solves simultaneously for one or more dependent variables (pressure, temperature, and concentration) at nodes in a horizontal or vertical mesh using a quasi-linearized general minimum residual method. This approach enhances computational speed beyond the speed of a sequential approach. Heterogeneous and anisotropic conditions are implemented locally using individual element property descriptions. This implementation allows local principal directions to differ among elements and from the global solution domain coordinates. Boundary conditions can include time-varying pressure head (or moisture content), heat, and/or concentration; fluxes distributed along domain boundaries and/or at internal node points; and/or convective moisture, heat, and solute fluxes along the domain boundaries; and/or unit hydraulic gradient along domain boundaries. Other model features include temperature and concentration dependent density (liquid and vapor) and viscosity, sorption and/or decay of a solute, and capability to determine moisture content beyond residual to zero. These features are described in the documentation together with development of the governing equations, application of the finite-element formulation (using the Galerkin approach), solution procedure, mass and energy balance considerations, input requirements, and output options. The VST2D model was verified, and results included solutions for problems of water transport under isohaline and isothermal conditions, heat transport under isobaric and isohaline conditions, solute transport under isobaric and isothermal conditions, and coupled water

  19. Visualizing SPH Cataclysmic Variable Accretion Disk Simulations with Blender

    NASA Astrophysics Data System (ADS)

    Kent, Brian R.; Wood, Matthew A.

    2015-01-01

    We present innovative ways to use Blender, a 3D graphics package, to visualize smoothed particle hydrodynamics particle data of cataclysmic variable accretion disks. We focus on the methods of shape key data constructs to increasedata i/o and manipulation speed. The implementation of the methods outlined allow for compositing of the various visualization layers into a final animation. The viewing of the disk in 3D from different angles can allow for a visual analysisof the physical system and orbits. The techniques have a wide ranging set of applications in astronomical visualization,including both observation and theoretical data.

  20. Multi-phase shock simulations with smoothed particle hydrodynamics (SPH)

    NASA Astrophysics Data System (ADS)

    Omang, M. G.; Trulsen, J. K.

    2014-09-01

    In this paper we present an approach to the implementation of a multi-phase description in the numerical Smoothed Particle Hydrodynamics method. The work is based on previous work, but has been modified to suit the applications of interest, in this case shock propagation through dusty gases. Theoretical models for multi-phase systems rely on the introduction of a number of terms describing the interaction between the different phases; drag and heat exchange are two examples. These terms contain parameters, the value of many of which must be determined empirically. We present results on the effect of changing values of some of the important parameters and compare our results to experimental and numerical results published in the literature. Our numerical results generally agree well with published results, taking uncertainties concerning accuracy in existing experimental data and details in the choice of parameters for numerical results into consideration. In particular, we find that a reduction in dust particle size is an efficient way of increasing shock retardation for a given dust loading.

  1. Characterization of a serine proteinase homologous (SPH) in Chinese mitten crab Eriocheir sinensis.

    PubMed

    Qin, Chuanjie; Chen, Liqiao; Qin, Jian G; Zhao, Daxian; Zhang, Hao; Wu, Ping; Li, Erchao

    2010-01-01

    The serine protease homologous (SPH) is an important cofactor of prophenoloxidase-activating enzyme (PPAE). The gene of SPH of Chinese mitten crab Eriocheir sinensis (EsSPH) in hemocytes was cloned and characterized using reverse transcript polymerase chain reaction (RT-PCR) and rapid amplification of cDNA ends (RACE). The SPH cDNA consisted of 1386 bp with an open reading frame (ORF) encoded a protein of 378 amino acids, 154 bp 5'-untranslated region, and 95 bp 3'-untranslated region. Sequence comparisons against the GenBank database showed that EsSPH deduced amino acids had an overall identity to the gene of serine protease family from 41% to 70% of 15 invertebrate species. The protein had the structural characteristics of SPH, including the conserved six cysteine residues in the N-terminal clip domain and the functional activity (His157, Asp209, Gly311) in the C-terminal serine proteinase-like domain. To analyze the role of EsSPH in an acute infection, the temporal expression of the EsSPH gene after the Aeromonas hydrophila challenge was measured by real-time RT-PCR. The EsSPH transcripts in hemocytes significantly increased at 6 h, 12 h and 48 h over time after the A. hydrophila injection. This expression pattern shows that EsSPH has the potential to defend against invading microorganisms. The mRNA transcripts of EsSPH were detected in all tissues with the highest in the hepatopancreas. Interestingly, the mRNA transcripts of EsSPH and proPO were found in ova and expressed in oosperms, suggesting that the maternal transfer of EsSPH and proPO may exit in crab, but this warrants confirmation in further research.

  2. Modelling of tsunami-like wave run-up, breaking and impact on a vertical wall by SPH method

    NASA Astrophysics Data System (ADS)

    Dao, M. H.; Xu, H.; Chan, E. S.; Tkalich, P.

    2013-12-01

    Accurate predictions of wave run-up and run-down are important for coastal impact assessment of relatively long waves such as tsunami or storm waves. Wave run-up is, however, a complex process involving nonlinear build-up of the wave front, intensive wave breaking and strong turbulent flow, making the numerical approximation challenging. Recent advanced modelling methodologies could help to overcome these numerical challenges. For a demonstration, we study run-up of non-breaking and breaking solitary waves on a vertical wall using two methods, an enhanced smoothed particle hydrodynamics (SPH) method and the traditional non-breaking nonlinear model Tunami-N2. The Tunami-N2 model fails to capture the evolution of steep waves at the proximity of breaking that was observed in the experiments. Whereas the SPH method successfully simulates the wave propagation, breaking, impact on structure and the reform and breaking processes of wave run-down. The study also indicates that inadequate approximation of the wave breaking could lead to significant under-predictions of wave height and impact pressure on structures. The SPH model shows potential applications for accurate impact assessments of wave run-up on to coastal structures.

  3. Approximate Riemann solvers for the Godunov SPH (GSPH)

    NASA Astrophysics Data System (ADS)

    Puri, Kunal; Ramachandran, Prabhu

    2014-08-01

    The Godunov Smoothed Particle Hydrodynamics (GSPH) method is coupled with non-iterative, approximate Riemann solvers for solutions to the compressible Euler equations. The use of approximate solvers avoids the expensive solution of the non-linear Riemann problem for every interacting particle pair, as required by GSPH. In addition, we establish an equivalence between the dissipative terms of GSPH and the signal based SPH artificial viscosity, under the restriction of a class of approximate Riemann solvers. This equivalence is used to explain the anomalous “wall heating” experienced by GSPH and we provide some suggestions to overcome it. Numerical tests in one and two dimensions are used to validate the proposed Riemann solvers. A general SPH pairing instability is observed for two-dimensional problems when using unequal mass particles. In general, Ducowicz Roe's and HLLC approximate Riemann solvers are found to be suitable replacements for the iterative Riemann solver in the original GSPH scheme.

  4. Stochastic Inversion of 2D Magnetotelluric Data

    SciTech Connect

    Chen, Jinsong

    2010-07-01

    The algorithm is developed to invert 2D magnetotelluric (MT) data based on sharp boundary parametrization using a Bayesian framework. Within the algorithm, we consider the locations and the resistivity of regions formed by the interfaces are as unknowns. We use a parallel, adaptive finite-element algorithm to forward simulate frequency-domain MT responses of 2D conductivity structure. Those unknown parameters are spatially correlated and are described by a geostatistical model. The joint posterior probability distribution function is explored by Markov Chain Monte Carlo (MCMC) sampling methods. The developed stochastic model is effective for estimating the interface locations and resistivity. Most importantly, it provides details uncertainty information on each unknown parameter. Hardware requirements: PC, Supercomputer, Multi-platform, Workstation; Software requirements C and Fortan; Operation Systems/version is Linux/Unix or Windows

  5. Stochastic Inversion of 2D Magnetotelluric Data

    2010-07-01

    The algorithm is developed to invert 2D magnetotelluric (MT) data based on sharp boundary parametrization using a Bayesian framework. Within the algorithm, we consider the locations and the resistivity of regions formed by the interfaces are as unknowns. We use a parallel, adaptive finite-element algorithm to forward simulate frequency-domain MT responses of 2D conductivity structure. Those unknown parameters are spatially correlated and are described by a geostatistical model. The joint posterior probability distribution function ismore » explored by Markov Chain Monte Carlo (MCMC) sampling methods. The developed stochastic model is effective for estimating the interface locations and resistivity. Most importantly, it provides details uncertainty information on each unknown parameter. Hardware requirements: PC, Supercomputer, Multi-platform, Workstation; Software requirements C and Fortan; Operation Systems/version is Linux/Unix or Windows« less

  6. Static & Dynamic Response of 2D Solids

    1996-07-15

    NIKE2D is an implicit finite-element code for analyzing the finite deformation, static and dynamic response of two-dimensional, axisymmetric, plane strain, and plane stress solids. The code is fully vectorized and available on several computing platforms. A number of material models are incorporated to simulate a wide range of material behavior including elasto-placicity, anisotropy, creep, thermal effects, and rate dependence. Slideline algorithms model gaps and sliding along material interfaces, including interface friction, penetration and single surfacemore » contact. Interactive-graphics and rezoning is included for analyses with large mesh distortions. In addition to quasi-Newton and arc-length procedures, adaptive algorithms can be defined to solve the implicit equations using the solution language ISLAND. Each of these capabilities and more make NIKE2D a robust analysis tool.« less

  7. Static & Dynamic Response of 2D Solids

    SciTech Connect

    Lin, Jerry

    1996-07-15

    NIKE2D is an implicit finite-element code for analyzing the finite deformation, static and dynamic response of two-dimensional, axisymmetric, plane strain, and plane stress solids. The code is fully vectorized and available on several computing platforms. A number of material models are incorporated to simulate a wide range of material behavior including elasto-placicity, anisotropy, creep, thermal effects, and rate dependence. Slideline algorithms model gaps and sliding along material interfaces, including interface friction, penetration and single surface contact. Interactive-graphics and rezoning is included for analyses with large mesh distortions. In addition to quasi-Newton and arc-length procedures, adaptive algorithms can be defined to solve the implicit equations using the solution language ISLAND. Each of these capabilities and more make NIKE2D a robust analysis tool.

  8. 2D photonic-crystal optomechanical nanoresonator.

    PubMed

    Makles, K; Antoni, T; Kuhn, A G; Deléglise, S; Briant, T; Cohadon, P-F; Braive, R; Beaudoin, G; Pinard, L; Michel, C; Dolique, V; Flaminio, R; Cagnoli, G; Robert-Philip, I; Heidmann, A

    2015-01-15

    We present the optical optimization of an optomechanical device based on a suspended InP membrane patterned with a 2D near-wavelength grating (NWG) based on a 2D photonic-crystal geometry. We first identify by numerical simulation a set of geometrical parameters providing a reflectivity higher than 99.8% over a 50-nm span. We then study the limitations induced by the finite value of the optical waist and lateral size of the NWG pattern using different numerical approaches. The NWG grating, pierced in a suspended InP 265-nm thick membrane, is used to form a compact microcavity involving the suspended nanomembrane as an end mirror. The resulting cavity has a waist size smaller than 10 μm and a finesse in the 200 range. It is used to probe the Brownian motion of the mechanical modes of the nanomembrane. PMID:25679837

  9. DYNA2D96. Explicit 2-D Hydrodynamic FEM Program

    SciTech Connect

    Whirley, R.G.

    1992-04-01

    DYNA2D is a vectorized, explicit, two-dimensional, axisymmetric and plane strain finite element program for analyzing the large deformation dynamic and hydrodynamic response of inelastic solids. DYNA2D contains 13 material models and 9 equations of state (EOS) to cover a wide range of material behavior. The material models implemented in all machine versions are: elastic, orthotropic elastic, kinematic/isotropic elastic plasticity, thermoelastoplastic, soil and crushable foam, linear viscoelastic, rubber, high explosive burn, isotropic elastic-plastic, temperature-dependent elastic-plastic. The isotropic and temperature-dependent elastic-plastic models determine only the deviatoric stresses. Pressure is determined by one of 9 equations of state including linear polynomial, JWL high explosive, Sack Tuesday high explosive, Gruneisen, ratio of polynomials, linear polynomial with energy deposition, ignition and growth of reaction in HE, tabulated compaction, and tabulated.

  10. 2D Four-Channel Perfect Reconstruction Filter Bank Realized with the 2D Lattice Filter Structure

    NASA Astrophysics Data System (ADS)

    Sezen, S.; Ertüzün, A.

    2006-12-01

    A novel orthogonal 2D lattice structure is incorporated into the design of a nonseparable 2D four-channel perfect reconstruction filter bank. The proposed filter bank is obtained by using the polyphase decomposition technique which requires the design of an orthogonal 2D lattice filter. Due to constraint of perfect reconstruction, each stage of this lattice filter bank is simply parameterized by two coefficients. The perfect reconstruction property is satisfied regardless of the actual values of these parameters and of the number of the lattice stages. It is also shown that a separable 2D four-channel perfect reconstruction lattice filter bank can be constructed from the 1D lattice filter and that this is a special case of the proposed 2D lattice filter bank under certain conditions. The perfect reconstruction property of the proposed 2D lattice filter approach is verified by computer simulations.

  11. Kinetically controlled synthesis of Au102(SPh)44 nanoclusters and catalytic application

    NASA Astrophysics Data System (ADS)

    Chen, Yongdong; Wang, Jin; Liu, Chao; Li, Zhimin; Li, Gao

    2016-05-01

    We here explore a kinetically controlled synthetic protocol for preparing solvent-solvable Au102(SPh)44 nanoclusters which are isolated from polydispersed gold nanoclusters by solvent extraction and size exclusion chromatography (SEC). The as-obtained Au102(SPh)44 nanoclusters are determined by matrix-assisted laser desorption ionization (MALDI) and electrospray ionization (ESI) mass spectrometry, in conjunction with UV-vis spectroscopy and thermogravimetric analysis (TGA). However, Au99(SPh)42, instead of Au102(SPh)44, is yielded when the polydispersed gold nanoclusters are etched in the presence of excess thiophenol under thermal conditions (e.g., 80 °C). Interestingly, the Au102(SPh)44 nanoclusters also can convert to Au99(SPh)42 with equivalent thiophenol ligands, evidenced by the analyses of UV-vis and MALDI mass spectrometry. Finally, the TiO2-supported Au102(SPh)44 nanocluster catalyst is investigated in the selective oxidation of sulfides into sulfoxides by the PhIO oxidant and gives rise to high catalytic activity (e.g., 80-99% conversion of R-S-R' sulfides with 96-99% selectivity for R-S(&z.dbd;O)-R' sulfoxides). The Au102(SPh)44/TiO2 catalyst also shows excellent recyclability in the sulfoxidation process.We here explore a kinetically controlled synthetic protocol for preparing solvent-solvable Au102(SPh)44 nanoclusters which are isolated from polydispersed gold nanoclusters by solvent extraction and size exclusion chromatography (SEC). The as-obtained Au102(SPh)44 nanoclusters are determined by matrix-assisted laser desorption ionization (MALDI) and electrospray ionization (ESI) mass spectrometry, in conjunction with UV-vis spectroscopy and thermogravimetric analysis (TGA). However, Au99(SPh)42, instead of Au102(SPh)44, is yielded when the polydispersed gold nanoclusters are etched in the presence of excess thiophenol under thermal conditions (e.g., 80 °C). Interestingly, the Au102(SPh)44 nanoclusters also can convert to Au99(SPh)42 with equivalent

  12. Modelling highly deformable metal extrusion using SPH

    NASA Astrophysics Data System (ADS)

    Prakash, Mahesh; Cleary, Paul W.

    2015-05-01

    Computational modelling is often used to reduce trial extrusions through accurate defect prediction. Traditionally, metal extrusion is modelled using mesh based finite element methods. However, large plastic deformations can lead to heavy re-meshing and numerical diffusion. Here we use the mesh-less smoothed particle hydrodynamics method since it allows simulation of large deformations without re-meshing and the tracking of history dependent properties such as plastic strain making it suitable for defect prediction. The variation in plastic strain and deformation for aluminium alloy in a cylindrical 3D geometry with extrusion ratio and die angle is evaluated. The extrusion process is found to have three distinct phases consisting of an initial sharp rise in extrusion force, a steady phase requiring constant force and terminating in a sharp decline in force as metal is completely extruded. Deformation and plastic strain increased significantly with extrusion ratio but only moderately with die angle. Extrusion force increased by 150 % as the extrusion ratio increased from 2:1 to 4:1 but had only a marginal change with die angle. A low strain zone in the centre of the extruded product was found to be a function of extrusion ratio but was persistent and did not vary with die angle. Simulation of a complex 3D building industry component showed large variations in plastic strain along the length of the product at two scales. These were due to change in metal behaviour as extrusion progressed from phase 1 to phase 2. A stagnation zone at the back of the die was predicted that could lead to the "funnel" or "pipe" defect.

  13. Integration of UAV photogrammetry and SPH modelling of fluids to study runoff on real terrains.

    PubMed

    Barreiro, Anxo; Domínguez, Jose M; C Crespo, Alejandro J; González-Jorge, Higinio; Roca, David; Gómez-Gesteira, Moncho

    2014-01-01

    Roads can experience runoff problems due to the intense rain discharge associated to severe storms. Two advanced tools are combined to analyse the interaction of complex water flows with real terrains. UAV (Unmanned Aerial Vehicle) photogrammetry is employed to obtain accurate topographic information on small areas, typically on the order of a few hectares. The Smoothed Particle Hydrodynamics (SPH) technique is applied by means of the DualSPHysics model to compute the trajectory of the water flow during extreme rain events. The use of engineering solutions to palliate flood events is also analysed. The study case simulates how the collected water can flow into a close road and how precautionary measures can be effective to drain water under extreme conditions. The amount of water arriving at the road is calculated under different protection scenarios and the efficiency of a ditch is observed to decrease when sedimentation reduces its depth.

  14. Integration of UAV Photogrammetry and SPH Modelling of Fluids to Study Runoff on Real Terrains

    PubMed Central

    Barreiro, Anxo; Domínguez, Jose M.; C. Crespo, Alejandro J.; González-Jorge, Higinio; Roca, David; Gómez-Gesteira, Moncho

    2014-01-01

    Roads can experience runoff problems due to the intense rain discharge associated to severe storms. Two advanced tools are combined to analyse the interaction of complex water flows with real terrains. UAV (Unmanned Aerial Vehicle) photogrammetry is employed to obtain accurate topographic information on small areas, typically on the order of a few hectares. The Smoothed Particle Hydrodynamics (SPH) technique is applied by means of the DualSPHysics model to compute the trajectory of the water flow during extreme rain events. The use of engineering solutions to palliate flood events is also analysed. The study case simulates how the collected water can flow into a close road and how precautionary measures can be effective to drain water under extreme conditions. The amount of water arriving at the road is calculated under different protection scenarios and the efficiency of a ditch is observed to decrease when sedimentation reduces its depth. PMID:25372035

  15. Application of a New Rheological Model to Rock Avalanches: An SPH Approach

    NASA Astrophysics Data System (ADS)

    Manzanal, D.; Drempetic, V.; Haddad, B.; Pastor, M.; Martin Stickle, M.; Mira, P.

    2016-06-01

    Rock avalanches move large volumes of material causing a highly destructive power over large areas. In these events, it is possible to monitor the evolution of slopes but failure cannot be always prevented. For this reason, modelling of the propagation phase provides engineers with fundamental information regarding speed, track, runout and depth. From these data, it is possible to perform a better risk assessment and propose mitigation measures to reduce the potential hazard of specific area. The purpose of this paper is to present a depth integrated, SPH model, which can be used to simulate real rock avalanches and to assess the influence of the rheology on the avalanche properties. The paper compares the performance of different rheological models to reproduce the track, runout and depth of the final deposit for both, scale test and real events such as Frank and Thurwiesier rock avalanches. These sets of benchmarks provide information on the proposed model accuracy and limitations.

  16. Au 133 (SPh - t Bu) 52 Nanomolecules: X-ray Crystallography, Optical, Electrochemical, and Theoretical Analysis

    SciTech Connect

    Dass, Amala; Theivendran, Shevanuja; Nimmala, Praneeth Reddy; Kumara, Chanaka; Jupally, Vijay Reddy; Fortunelli, Alessandro; Sementa, Luca; Barcaro, Giovanni; Zuo, Xiaobing; Noll, Bruce C.

    2015-04-15

    Crystal structure determination has revolutionized modern science in biology, chemistry, and physics. However, the difficulty in obtaining periodic crystal lattices which are needed for X-ray crystal analysis has hindered the determination of atomic structure in nanomaterials, known as the "nanostructure problem". Here, by using rigid and bulky ligands, we have overcome this limitation and successfully solved the X-ray crystallographic structure of the largest reported thiolated gold nanomolecule, Au133S52. The total composition, Au-133(SPh-tBu)(52), was verified using high resolution electrospray ionization mass spectrometry (ESI-MS). The experimental and simulated optical spectra show an emergent surface plasmon resonance that is more pronounced than in the slightly larger Au-144(SCH2CH2Ph)(60). Theoretical analysis indicates that the presence of rigid and bulky ligands is the key to the successful crystal formation.

  17. MOSS2D V1

    2001-01-31

    This software reduces the data from two-dimensional kSA MOS program, k-Space Associates, Ann Arbor, MI. Initial MOS data is recorded without headers in 38 columns, with one row of data per acquisition per lase beam tracked. The final MOSS 2d data file is reduced, graphed, and saved in a tab-delimited column format with headers that can be plotted in any graphing software.

  18. A new inversion method for (T2, D) 2D NMR logging and fluid typing

    NASA Astrophysics Data System (ADS)

    Tan, Maojin; Zou, Youlong; Zhou, Cancan

    2013-02-01

    One-dimensional nuclear magnetic resonance (1D NMR) logging technology has some significant limitations in fluid typing. However, not only can two-dimensional nuclear magnetic resonance (2D NMR) provide some accurate porosity parameters, but it can also identify fluids more accurately than 1D NMR. In this paper, based on the relaxation mechanism of (T2, D) 2D NMR in a gradient magnetic field, a hybrid inversion method that combines least-squares-based QR decomposition (LSQR) and truncated singular value decomposition (TSVD) is examined in the 2D NMR inversion of various fluid models. The forward modeling and inversion tests are performed in detail with different acquisition parameters, such as magnetic field gradients (G) and echo spacing (TE) groups. The simulated results are discussed and described in detail, the influence of the above-mentioned observation parameters on the inversion accuracy is investigated and analyzed, and the observation parameters in multi-TE activation are optimized. Furthermore, the hybrid inversion can be applied to quantitatively determine the fluid saturation. To study the effects of noise level on the hybrid method and inversion results, the numerical simulation experiments are performed using different signal-to-noise-ratios (SNRs), and the effect of different SNRs on fluid typing using three fluid models are discussed and analyzed in detail.

  19. 2D Spinodal Decomposition in Forced Turbulence

    NASA Astrophysics Data System (ADS)

    Fan, Xiang; Diamond, Patrick; Chacon, Luis; Li, Hui

    2015-11-01

    Spinodal decomposition is a second order phase transition for binary fluid mixture, from one thermodynamic phase to form two coexisting phases. The governing equation for this coarsening process below critical temperature, Cahn-Hilliard Equation, is very similar to 2D MHD Equation, especially the conserved quantities have a close correspondence between each other, so theories for MHD turbulence are used to study spinodal decomposition in forced turbulence. Domain size is increased with time along with the inverse cascade, and the length scale can be arrested by a forced turbulence with direct cascade. The two competing mechanisms lead to a stabilized domain size length scale, which can be characterized by Hinze Scale. The 2D spinodal decomposition in forced turbulence is studied by both theory and simulation with ``pixie2d.'' This work focuses on the relation between Hinze scale and spectra and cascades. Similarities and differences between spinodal decomposition and MHD are investigated. Also some transport properties are studied following MHD theories. This work is supported by the Department of Energy under Award Number DE-FG02-04ER54738.

  20. MAGNUM-2D computer code: user's guide

    SciTech Connect

    England, R.L.; Kline, N.W.; Ekblad, K.J.; Baca, R.G.

    1985-01-01

    Information relevant to the general use of the MAGNUM-2D computer code is presented. This computer code was developed for the purpose of modeling (i.e., simulating) the thermal and hydraulic conditions in the vicinity of a waste package emplaced in a deep geologic repository. The MAGNUM-2D computer computes (1) the temperature field surrounding the waste package as a function of the heat generation rate of the nuclear waste and thermal properties of the basalt and (2) the hydraulic head distribution and associated groundwater flow fields as a function of the temperature gradients and hydraulic properties of the basalt. MAGNUM-2D is a two-dimensional numerical model for transient or steady-state analysis of coupled heat transfer and groundwater flow in a fractured porous medium. The governing equations consist of a set of coupled, quasi-linear partial differential equations that are solved using a Galerkin finite-element technique. A Newton-Raphson algorithm is embedded in the Galerkin functional to formulate the problem in terms of the incremental changes in the dependent variables. Both triangular and quadrilateral finite elements are used to represent the continuum portions of the spatial domain. Line elements may be used to represent discrete conduits. 18 refs., 4 figs., 1 tab.

  1. Periodically sheared 2D Yukawa systems

    SciTech Connect

    Kovács, Anikó Zsuzsa; Hartmann, Peter; Donkó, Zoltán

    2015-10-15

    We present non-equilibrium molecular dynamics simulation studies on the dynamic (complex) shear viscosity of a 2D Yukawa system. We have identified a non-monotonic frequency dependence of the viscosity at high frequencies and shear rates, an energy absorption maximum (local resonance) at the Einstein frequency of the system at medium shear rates, an enhanced collective wave activity, when the excitation is near the plateau frequency of the longitudinal wave dispersion, and the emergence of significant configurational anisotropy at small frequencies and high shear rates.

  2. Collective molecular dissipation on Navier-Stokes macroscopic scales: Accretion disc viscous modeling in SPH

    NASA Astrophysics Data System (ADS)

    Lanzafame, Giuseppe

    2015-02-01

    In the nonlinear Navier-Stokes viscous flow dynamics, physical damping is mathematically accomplished by a braking term in the momentum equation, corresponding to a heating term in the energy equation, both responsible of the conversion of mechanical energy into heat. In such two terms, it is essential the role of the viscous stress tensor, relative to contiguous macroscopic moving flow components, depending on the macroscopic viscosity coefficient ν. A working formulation for ν can always be found analytically, tuning some arbitrary parameters in the current known formulations, according to the geometry, morphology and physics of the flow. Instead, in this paper, we write an alternative hybrid formulation for ν, where molecular parameters are also included. Our expression for ν has a more physical interpretation of the internal damping in dilute gases because the macroscopic viscosity is related to the small scale molecular dissipation, not strictly dependent on the flow morphology, as well as it is free of any arbitrary parameter. Results for some basic 2D tests are shown in the smoothed particle hydrodynamics (SPH) framework. An application to the 3D accretion disc modeling for low mass cataclysmic variables is also discussed. Consequences of the macroscopic viscosity coefficient reformulation in a more strictly physical terms on the thermal conductivity coefficient for dilute gases are also discussed.

  3. Kinetically controlled synthesis of Au102(SPh)44 nanoclusters and catalytic application.

    PubMed

    Chen, Yongdong; Wang, Jin; Liu, Chao; Li, Zhimin; Li, Gao

    2016-05-21

    We here explore a kinetically controlled synthetic protocol for preparing solvent-solvable Au102(SPh)44 nanoclusters which are isolated from polydispersed gold nanoclusters by solvent extraction and size exclusion chromatography (SEC). The as-obtained Au102(SPh)44 nanoclusters are determined by matrix-assisted laser desorption ionization (MALDI) and electrospray ionization (ESI) mass spectrometry, in conjunction with UV-vis spectroscopy and thermogravimetric analysis (TGA). However, Au99(SPh)42, instead of Au102(SPh)44, is yielded when the polydispersed gold nanoclusters are etched in the presence of excess thiophenol under thermal conditions (e.g., 80 °C). Interestingly, the Au102(SPh)44 nanoclusters also can convert to Au99(SPh)42 with equivalent thiophenol ligands, evidenced by the analyses of UV-vis and MALDI mass spectrometry. Finally, the TiO2-supported Au102(SPh)44 nanocluster catalyst is investigated in the selective oxidation of sulfides into sulfoxides by the PhIO oxidant and gives rise to high catalytic activity (e.g., 80-99% conversion of R-S-R' sulfides with 96-99% selectivity for R-S([double bond, length as m-dash]O)-R' sulfoxides). The Au102(SPh)44/TiO2 catalyst also shows excellent recyclability in the sulfoxidation process.

  4. Self-perception of health (SPH) in the oldest-old subjects.

    PubMed

    Zikic, L; Jankelic, S; Milosevic, D P; Despotovic, N; Erceg, P; Davidovic, M

    2009-01-01

    SPH is a subjective and objective assessment of personal health. It is important in evaluation of health status in the elderly as it has capacity to predict mortality, functional declining, and health-care demands. A lot of research has been published about SPH in the elderly, but little is known about SPH in the very old, especially in comparison with the "younger-old" (YO) population. The study has aimed to investigate SPH in 240 elderly patients and compare the data between the "oldest-old" (OO) (aged >or= 90 years; n=52) and the YO (aged 60-74 years; n=188) subjects. Results have shown that the OO group of patients had better SPH than their YO counterparts. Our findings implicate that very old persons belong to a special sub-group of elderly, the "successfully aged", probably due to their genetic stability, distinctive lifestyle, or both.

  5. Unparticle example in 2D.

    PubMed

    Georgi, Howard; Kats, Yevgeny

    2008-09-26

    We discuss what can be learned about unparticle physics by studying simple quantum field theories in one space and one time dimension. We argue that the exactly soluble 2D theory of a massless fermion coupled to a massive vector boson, the Sommerfield model, is an interesting analog of a Banks-Zaks model, approaching a free theory at high energies and a scale-invariant theory with nontrivial anomalous dimensions at low energies. We construct a toy standard model coupling to the fermions in the Sommerfield model and study how the transition from unparticle behavior at low energies to free particle behavior at high energies manifests itself in interactions with the toy standard model particles.

  6. Practical Algorithm For Computing The 2-D Arithmetic Fourier Transform

    NASA Astrophysics Data System (ADS)

    Reed, Irving S.; Choi, Y. Y.; Yu, Xiaoli

    1989-05-01

    Recently, Tufts and Sadasiv [10] exposed a method for computing the coefficients of a Fourier series of a periodic function using the Mobius inversion of series. They called this method of analysis the Arithmetic Fourier Transform(AFT). The advantage of the AFT over the FN 1' is that this method of Fourier analysis needs only addition operations except for multiplications by scale factors at one stage of the computation. The disadvantage of the AFT as they expressed it originally is that it could be used effectively only to compute finite Fourier coefficients of a real even function. To remedy this the AFT developed in [10] is extended in [11] to compute the Fourier coefficients of both the even and odd components of a periodic function. In this paper, the improved AFT [11] is extended to a two-dimensional(2-D) Arithmetic Fourier Transform for calculating the Fourier Transform of two-dimensional discrete signals. This new algorithm is based on both the number-theoretic method of Mobius inversion of double series and the complex conjugate property of Fourier coefficients. The advantage of this algorithm over the conventional 2-D FFT is that the corner-turning problem needed in a conventional 2-D Discrete Fourier Transform(DFT) can be avoided. Therefore, this new 2-D algorithm is readily suitable for VLSI implementation as a parallel architecture. Comparing the operations of 2-D AFT of a MxM 2-D data array with the conventional 2-D FFT, the number of multiplications is significantly reduced from (2log2M)M2 to (9/4)M2. Hence, this new algorithm is faster than the FFT algorithm. Finally, two simulation results of this new 2-D AFT algorithm for 2-D artificial and real images are given in this paper.

  7. A multiscale SPH particle model of the near-wall dynamics of leukocytes in flow.

    PubMed

    Gholami, Babak; Comerford, Andrew; Ellero, Marco

    2014-01-01

    A novel multiscale Lagrangian particle solver based on SPH is developed with the intended application of leukocyte transport in large arteries. In such arteries, the transport of leukocytes and red blood cells can be divided into two distinct regions: the bulk flow and the near-wall region. In the bulk flow, the transport can be modeled on a continuum basis as the transport of passive scalar concentrations. Whereas in the near-wall region, specific particle tracking of the leukocytes is required and lubrication forces need to be separately taken into account. Because of large separation of spatio-temporal scales involved in the problem, simulations of red blood cells and leukocytes are handled separately. In order to take the exchange of leukocytes between the bulk fluid and the near-wall region into account, solutions are communicated through coupling of conserved quantities at the interface between these regions. Because the particle tracking is limited to those leukocytes lying in the near-wall region only, our approach brings considerable speedup to the simulation of leukocyte circulation in a test geometry of a backward-facing step, which encompasses many flow features observed in vivo.

  8. Transformation of Au144(SCH2CH2Ph)60 to Au133(SPh-tBu)52 Nanomolecules: Theoretical and Experimental Study.

    PubMed

    Nimmala, Praneeth Reddy; Theivendran, Shevanuja; Barcaro, Giovanni; Sementa, Luca; Kumara, Chanaka; Jupally, Vijay Reddy; Apra, Edoardo; Stener, Mauro; Fortunelli, Alessandro; Dass, Amala

    2015-06-01

    Ultrastable gold nanomolecule Au144(SCH2CH2Ph)60 upon etching with excess tert-butylbenzenethiol undergoes a core-size conversion and compositional change to form an entirely new core of Au133(SPh-tBu)52. This conversion was studied using high-resolution electrospray mass spectrometry which shows that the core size conversion is initiated after 22 ligand exchanges, suggesting a relatively high stability of the Au144(SCH2CH2Ph)38(SPh-tBu)22 intermediate. The Au144 → Au133 core size conversion is surprisingly different from the Au144 → Au99 core conversion reported in the case of thiophenol, -SPh. Theoretical analysis and ab initio molecular dynamics simulations show that rigid p-tBu groups play a crucial role by reducing the cluster structural freedom, and protecting the cluster from adsorption of exogenous and reactive species, thus rationalizing the kinetic factors that stabilize the Au133 core size. This 144-atom to 133-atom nanomolecule's compositional change is reflected in optical spectroscopy and electrochemistry.

  9. Zebrafish U6 small nuclear RNA gene promoters contain a SPH element in an unusual location.

    PubMed

    Halbig, Kari M; Lekven, Arne C; Kunkel, Gary R

    2008-09-15

    Promoters for vertebrate small nuclear RNA (snRNA) genes contain a relatively simple array of transcriptional control elements, divided into proximal and distal regions. Most of these genes are transcribed by RNA polymerase II (e.g., U1, U2), whereas the U6 gene is transcribed by RNA polymerase III. Previously identified vertebrate U6 snRNA gene promoters consist of a proximal sequence element (PSE) and TATA element in the proximal region, plus a distal region with octamer (OCT) and SphI postoctamer homology (SPH) elements. We have found that zebrafish U6 snRNA promoters contain the SPH element in a novel proximal position immediately upstream of the TATA element. The zebrafish SPH element is recognized by SPH-binding factor/selenocysteine tRNA gene transcription activating factor/zinc finger protein 143 (SBF/Staf/ZNF143) in vitro. Furthermore, a zebrafish U6 promoter with a defective SPH element is inefficiently transcribed when injected into embryos.

  10. Thermally robust Au99(SPh)42 nanoclusters for chemoselective hydrogenation of nitrobenzaldehyde derivatives in water.

    PubMed

    Li, Gao; Zeng, Chenjie; Jin, Rongchao

    2014-03-01

    We report the synthesis and catalytic application of thermally robust gold nanoclusters formulated as Au99(SPh)42. The formula was determined by electrospray ionization and matrix-assisted laser desorption ionization mass spectrometry in conjunction with thermogravimetric analysis. The optical spectrum of Au99(SPh)42 nanoclusters shows absorption peaks at ~920 nm (1.35 eV), 730 nm (1.70 eV), 600 nm (2.07 eV), 490 nm (2.53 eV), and 400 nm (3.1 eV) in contrast to conventional gold nanoparticles, which exhibit a plasmon resonance band at 520 nm (for spherical particles). The ceria-supported Au99(SPh)42 nanoclusters were utilized as a catalyst for chemoselective hydrogenation of nitrobenzaldehyde to nitrobenzyl alcohol in water using H2 gas as the hydrogen source. The selective hydrogenation of the aldehyde group catalyzed by nanoclusters is a surprise because conventional nanogold catalysts instead give rise to the product resulting from reduction of the nitro group. The Au99(SPh)42/CeO2 catalyst gives high catalytic activity for a range of nitrobenzaldehyde derivatives and also shows excellent recyclability due to its thermal robustness. We further tested the size-dependent catalytic performance of Au25(SPh)18 and Au36(SPh)24 nanoclusters, and on the basis of their crystal structures we propose a molecular adsorption site for nitrobenzaldehyde. The nanocluster material is expected to find wide application in catalytic reactions.

  11. Pilot Study on the Detection of Simulated Lesions Using a 2D and 3D Digital Full-Field Mammography System with a Newly Developed High Resolution Detector Based on Two Shifts of a-Se.

    PubMed

    Schulz-Wendtland, R; Bani, M; Lux, M P; Schwab, S; Loehberg, C R; Jud, S M; Rauh, C; Bayer, C M; Beckmann, M W; Uder, M; Fasching, P A; Adamietz, B; Meier-Meitinger, M

    2012-05-01

    Purpose: Experimental study of a new system for digital 2D and 3D full-field mammography (FFDM) using a high resolution detector based on two shifts of a-Se. Material and Methods: Images were acquired using the new FFDM system Amulet® (FujiFilm, Tokio, Japan), an a-Se detector (receptor 24 × 30 cm(2), pixel size 50 µm, memory depth 12 bit, spatial resolution 10 lp/mm, DQE > 0.50). Integrated in the detector is a new method for data transfer, based on optical switch technology. The object of investigation was the Wisconsin Mammographic Random Phantom, Model 152A (Radiation Measurement Inc., Middleton, WI, USA) and the same parameters and exposure data (Tungsten, 100 mAs, 30 kV) were consistently used. We acquired 3 different pairs of images in the c-c and ml planes (2D) and in the c-c and c-c planes with an angle of 4 degrees (3D). Five radiologists experienced in mammography (experience ranging from 3 months to more than 5 years) analyzed the images (monitoring) which had been randomly encoded (random generator) with regard to the recognition of details such as specks of aluminum oxide (200-740 µm), nylon fibers (0.4-1.6 mm) and round lesions/masses (diameters 5-14 mm), using special linear glasses for 3D visualization, and compared the results. Results: A total of 225 correct positive decisions could be detected: we found 222 (98.7 %) correct positive results for 2D and 3D visualization in each case. Conclusion: The results of this phantom study showed the same detection rates for both 2D and 3D imaging using full field digital mammography. Our results must be confirmed in further clinical trials.

  12. The mass distribution of the Fornax dSph: constraints from its globular cluster distribution

    NASA Astrophysics Data System (ADS)

    Cole, David R.; Dehnen, Walter; Read, Justin I.; Wilkinson, Mark I.

    2012-10-01

    Uniquely among the dwarf spheroidal (dSph) satellite galaxies of the Milky Way, Fornax hosts globular clusters. It remains a puzzle as to why dynamical friction has not yet dragged any of Fornax's five globular clusters to the centre, and also why there is no evidence that any similar star cluster has been in the past (for Fornax or any other tidally undisrupted dSph). We set up a suite of 2800 N-body simulations that sample the full range of globular cluster orbits and mass models consistent with all existing observational constraints for Fornax. In agreement with previous work, we find that if Fornax has a large dark matter core, then its globular clusters remain close to their currently observed locations for long times. Furthermore, we find previously unreported behaviour for clusters that start inside the core region. These are pushed out of the core and gain orbital energy, a process we call 'dynamical buoyancy'. Thus, a cored mass distribution in Fornax will naturally lead to a shell-like globular cluster distribution near the core radius, independent of the initial conditions. By contrast, cold dark matter-type cusped mass distributions lead to the rapid infall of at least one cluster within Δt = 1-2 Gyr, except when picking unlikely initial conditions for the cluster orbits (˜2 per cent probability), and almost all clusters within Δt = 10 Gyr. Alternatively, if Fornax has only a weakly cusped mass distribution, then dynamical friction is much reduced. While over Δt = 10 Gyr this still leads to the infall of one to four clusters from their present orbits, the infall of any cluster within Δt = 1-2 Gyr is much less likely (with probability 0-70 per cent, depending on Δt and the strength of the cusp). Such a solution to the timing problem requires (in addition to a shallow dark matter cusp) that in the past the globular clusters were somewhat further from Fornax than today; they most likely did not form within Fornax, but were accreted.

  13. Perspectives for spintronics in 2D materials

    NASA Astrophysics Data System (ADS)

    Han, Wei

    2016-03-01

    The past decade has been especially creative for spintronics since the (re)discovery of various two dimensional (2D) materials. Due to the unusual physical characteristics, 2D materials have provided new platforms to probe the spin interaction with other degrees of freedom for electrons, as well as to be used for novel spintronics applications. This review briefly presents the most important recent and ongoing research for spintronics in 2D materials.

  14. Quantitative 2D liquid-state NMR.

    PubMed

    Giraudeau, Patrick

    2014-06-01

    Two-dimensional (2D) liquid-state NMR has a very high potential to simultaneously determine the absolute concentration of small molecules in complex mixtures, thanks to its capacity to separate overlapping resonances. However, it suffers from two main drawbacks that probably explain its relatively late development. First, the 2D NMR signal is strongly molecule-dependent and site-dependent; second, the long duration of 2D NMR experiments prevents its general use for high-throughput quantitative applications and affects its quantitative performance. Fortunately, the last 10 years has witnessed an increasing number of contributions where quantitative approaches based on 2D NMR were developed and applied to solve real analytical issues. This review aims at presenting these recent efforts to reach a high trueness and precision in quantitative measurements by 2D NMR. After highlighting the interest of 2D NMR for quantitative analysis, the different strategies to determine the absolute concentrations from 2D NMR spectra are described and illustrated by recent applications. The last part of the manuscript concerns the recent development of fast quantitative 2D NMR approaches, aiming at reducing the experiment duration while preserving - or even increasing - the analytical performance. We hope that this comprehensive review will help readers to apprehend the current landscape of quantitative 2D NMR, as well as the perspectives that may arise from it.

  15. Influences of sequential cuts on micro-cutting process studied by smooth particle hydrodynamic (SPH)

    NASA Astrophysics Data System (ADS)

    Zhao, Hongwei; Liu, Chuang; Cui, Tao; Tian, Ye; Shi, Chengli; Li, Jianping; Huang, Hu

    2013-11-01

    Machined surface properties have a great influence on the service life of component. The residual stress in machined surface layer is affected by the micro-cutting process. Sequential cuts influence the machined surface layer. In this paper, a mesh-less method called SPH (smooth particle hydrodynamic) is used to investigate the effect of sequential cuts and residual stress on chip formation, cutting force and the residual stress in machined surface for oxygen-free high-conductivity copper (OFHC). In micro-cutting process the cutting edge radius plays a crucial role. The effect of the cutting edge radius on residual stress is also investigated in this paper. The simulation results showed that the chip curled severely and the minimum chip thickness decreased in the second cut because of residual stress in the machined surface after the first cut. Meanwhile, the cutting force in the second cut was smaller than the first cut, while the thrust force was nearly the same during two cuts. In addition, the tensile residual stress beneath the machined surface layer would change to compressive stress after the second cut. Therefore, the residual stress in machined surface can be changed through sequential cuts with proper machining parameters to get high quality machined surface.

  16. Spreading dynamics of 2D dipolar Langmuir monolayer phases.

    PubMed

    Heinig, P; Wurlitzer, S; Fischer, Th M

    2004-07-01

    We study the spreading of a liquid 2D dipolar droplet in a Langmuir monolayer. Interfacial tensions (line tensions) and microscopic contact angles depend on the scale on which they are probed and obey a scaling law. Assuming rapid equilibration of the microscopic contact angle and ideal slippage of the 2D solid/liquid and solid/gas boundary, the driving force of spreading is merely expressed by the shape-dependent long-range interaction integrals. We obtain good agreement between experiment and numerical simulations using this theory. PMID:15278693

  17. PDGF induces SphK1 expression via Egr-1 to promote pulmonary artery smooth muscle cell proliferation.

    PubMed

    Sysol, Justin R; Natarajan, Viswanathan; Machado, Roberto F

    2016-06-01

    Pulmonary arterial hypertension (PAH) is a progressive, life-threatening disease for which there is currently no curative treatment available. Pathologic changes in this disease involve remodeling of the pulmonary vasculature, including marked proliferation of pulmonary artery smooth muscle cells (PASMCs). Recently, the bioactive lipid sphingosine-1-phosphate (S1P) and its activating kinase, sphingosine kinase 1 (SphK1), have been shown to be upregulated in PAH and promote PASMC proliferation. The mechanisms regulating the transcriptional upregulation of SphK1 in PASMCs are unknown. In this study, we investigated the role of platelet-derived growth factor (PDGF), a PAH-relevant stimuli associated with enhanced PASMC proliferation, on SphK1 expression regulation. In human PASMCs (hPASMCs), PDGF significantly increased SphK1 mRNA and protein expression and induced cell proliferation. Selective inhibition of SphK1 attenuated PDGF-induced hPASMC proliferation. In silico promoter analysis for SphK1 identified several binding sites for early growth response protein 1 (Egr-1), a PDGF-associated transcription factor. Luciferase assays demonstrated that PDGF activates the SphK1 promoter in hPASMCs, and truncation of the 5'-promoter reduced PDGF-induced SphK1 expression. Stimulation of hPASMCs with PDGF induced Egr-1 protein expression, and direct binding of Egr-1 to the SphK1 promoter was confirmed by chromatin immunoprecipitation analysis. Inhibition of ERK signaling prevented induction of Egr-1 by PDGF. Silencing of Egr-1 attenuated PDGF-induced SphK1 expression and hPASMC proliferation. These studies demonstrate that SphK1 is regulated by PDGF in hPASMCs via the transcription factor Egr-1, promoting cell proliferation. This novel mechanism of SphK1 regulation may be a therapeutic target in pulmonary vascular remodeling in PAH. PMID:27099350

  18. Multi-resolution flow simulations by smoothed particle hydrodynamics via domain decomposition

    NASA Astrophysics Data System (ADS)

    Bian, Xin; Li, Zhen; Tang, Yu-Hang; Karniadakis, George

    2015-11-01

    We present a methodology to concurrently couple particle-based methods via a domain decomposition (DD) technique for simulating viscous flows. In particular, we select two resolutions of the smoothed particle hydrodynamics (SPH) method as demonstration. Within the DD framework, a simulation domain is decomposed into two (or more) overlapping sub-domains, each of which has an individual particle scale determined by the local flow physics. Consistency of the two sub-domains is achieved in the overlap region by matching the two independent simulations based on Lagrangian interpolation of state variables and fluxes. The domain decomposition based SPH method (DD-SPH) employs different spatial and temporal resolutions, and hence, each sub-domain has its own smoothing length and time step. As a consequence, particle refinement and de-refinement are performed asynchronously according to individual time advancement of each sub-domain. The proposed strategy avoids SPH force interactions between different resolutions on purpose, so that coupling, in principle, can go beyond SPH - SPH, and may allow SPH to be coupled with other mesoscopic or microscopic particle methods. The DD-SPH method is validated first for a transient Couette flow, where simulation results base. US DOE Collaboratory on Mathematics for Mesoscopic Modeling of Materials (CM4).

  19. Staring 2-D hadamard transform spectral imager

    DOEpatents

    Gentry, Stephen M.; Wehlburg, Christine M.; Wehlburg, Joseph C.; Smith, Mark W.; Smith, Jody L.

    2006-02-07

    A staring imaging system inputs a 2D spatial image containing multi-frequency spectral information. This image is encoded in one dimension of the image with a cyclic Hadamarid S-matrix. The resulting image is detecting with a spatial 2D detector; and a computer applies a Hadamard transform to recover the encoded image.

  20. SPH modeling of adhesion in fast dynamics: Application to the Cold Spray process

    NASA Astrophysics Data System (ADS)

    Profizi, Paul; Combescure, Alain; Ogawa, Kahuziro

    2016-04-01

    The objective of this paper is to show, in a specific case, the importance of modeling adhesive forces when simulating the bouncing of very small particles impacting a substrate at high speed. The implementation of this model into a fast-dynamics SPH code is described. Taking the example of an impacted elastic cylinder, we show that the adhesive forces, which are surface forces, play a significant role only if the particles are sufficiently small. The effect of the choice of the type of interaction law in the cohesive zone is studied and some conclusions on the relevance of the modeling of the adhesive forces for fast-dynamics impacts are drawn. Then, the adhesion model is used to simulate the Cold Spray process. An aluminum particle is projected against a substrate made of the same material at a velocity ranging from 200 to 1000 m ṡs-1. We study the effects of the various modeling assumptions on the final result: bouncing or sticking. Increasingly complex models are considered. At a 200 m ṡs-1 impact velocity, elastic behavior is assumed, the substrate being simply supported at its base and supplied with absorbing boundaries. The same absorbing boundaries are also used for all the other simulations. Then, plasticity is introduced and the impact velocity is increased up to 1000 m ṡs-1. At the highest velocities, the resulting strains are very significant. The calculations show that if the adhesion model is appropriately chosen, it is possible to reproduce the experimental observations: the particles stick to the substrate in a range of impact velocities surrounded by two velocity ranges in which the particles bounce.

  1. Au133(SPh-tBu)52 nanomolecules: X-ray crystallography, optical, electrochemical, and theoretical analysis.

    PubMed

    Dass, Amala; Theivendran, Shevanuja; Nimmala, Praneeth Reddy; Kumara, Chanaka; Jupally, Vijay Reddy; Fortunelli, Alessandro; Sementa, Luca; Barcaro, Giovanni; Zuo, Xiaobing; Noll, Bruce C

    2015-04-15

    Crystal structure determination has revolutionized modern science in biology, chemistry, and physics. However, the difficulty in obtaining periodic crystal lattices which are needed for X-ray crystal analysis has hindered the determination of atomic structure in nanomaterials, known as the "nanostructure problem". Here, by using rigid and bulky ligands, we have overcome this limitation and successfully solved the X-ray crystallographic structure of the largest reported thiolated gold nanomolecule, Au133S52. The total composition, Au133(SPh-tBu)52, was verified using high resolution electrospray ionization mass spectrometry (ESI-MS). The experimental and simulated optical spectra show an emergent surface plasmon resonance that is more pronounced than in the slightly larger Au144(SCH2CH2Ph)60. Theoretical analysis indicates that the presence of rigid and bulky ligands is the key to the successful crystal formation.

  2. Au133(SPh-tBu)52 Nanomolecules: X-ray Crystallography, Optical, Electrochemical, and Theoretical Analysis

    SciTech Connect

    Dass, Amala; Theivendran, Shevanuja; Nimmala, Praneeth Reddy; Kumara, Chanaka; Jupally, Vijay Reddy; Fortunelli, Alessandro; Sementa, Luca; Barcaro, Giovanni; Zuo, Xiaobing; Noll, Bruce C.

    2015-04-15

    Crystal structure determination has revolutionized modern science in biology, chemistry, and physics. However, the difficulty in obtaining periodic crystal lattices which are needed for X-ray crystal analysis has hindered the determination of atomic structure in nanomaterials, known as the “nanostructure problem”. Here, by using rigid and bulky ligands, we have overcome this limitation and successfully solved the X-ray crystallographic structure of the largest reported thiolated gold nanomolecule, Au133S52. The total composition, Au133(SPh-tBu)52, was verified using high resolution electrospray ionization mass spectrometry (ESI-MS). The experimental and simulated optical spectra show an emergent surface plasmon resonance that is more pronounced than in the slightly larger Au144(SCH2CH2Ph)60. Theoretical analysis indicates that the presence of rigid and bulky ligands is the key to the successful crystal formation.

  3. Sparse radar imaging using 2D compressed sensing

    NASA Astrophysics Data System (ADS)

    Hou, Qingkai; Liu, Yang; Chen, Zengping; Su, Shaoying

    2014-10-01

    Radar imaging is an ill-posed linear inverse problem and compressed sensing (CS) has been proved to have tremendous potential in this field. This paper surveys the theory of radar imaging and a conclusion is drawn that the processing of ISAR imaging can be denoted mathematically as a problem of 2D sparse decomposition. Based on CS, we propose a novel measuring strategy for ISAR imaging radar and utilize random sub-sampling in both range and azimuth dimensions, which will reduce the amount of sampling data tremendously. In order to handle 2D reconstructing problem, the ordinary solution is converting the 2D problem into 1D by Kronecker product, which will increase the size of dictionary and computational cost sharply. In this paper, we introduce the 2D-SL0 algorithm into the reconstruction of imaging. It is proved that 2D-SL0 can achieve equivalent result as other 1D reconstructing methods, but the computational complexity and memory usage is reduced significantly. Moreover, we will state the results of simulating experiments and prove the effectiveness and feasibility of our method.

  4. A serine proteinase homologue, SPH-3, plays a central role in insect immunity.

    PubMed

    Felföldi, Gabriella; Eleftherianos, Ioannis; Ffrench-Constant, Richard H; Venekei, István

    2011-04-15

    Numerous vertebrate and invertebrate genes encode serine proteinase homologues (SPHs) similar to members of the serine proteinase family, but lacking one or more residues of the catalytic triad. These SPH proteins are thought to play a role in immunity, but their precise functions are poorly understood. In this study, we show that SPH-3 (an insect non-clip domain-containing SPH) is of central importance in the immune response of a model lepidopteran, Manduca sexta. We examine M. sexta infection with a virulent, insect-specific, Gram-negative bacterium Photorhabdus luminescens. RNA interference suppression of bacteria-induced SPH-3 synthesis severely compromises the insect's ability to defend itself against infection by preventing the transcription of multiple antimicrobial effector genes, but, surprisingly, not the transcription of immune recognition genes. Upregulation of the gene encoding prophenoloxidase and the activity of the phenoloxidase enzyme are among the antimicrobial responses that are severely attenuated on SPH-3 knockdown. These findings suggest the existence of two largely independent signaling pathways controlling immune recognition by the fat body, one governing effector gene transcription, and the other regulating genes encoding pattern recognition proteins.

  5. Boosting the accuracy of SPH techniques: Newtonian and special-relativistic tests

    NASA Astrophysics Data System (ADS)

    Rosswog, S.

    2015-04-01

    We study the impact of different discretization choices on the accuracy of smoothed particle hydrodynamics (SPH) and we explore them in a large number of Newtonian and special-relativistic benchmark tests. As a first improvement, we explore a gradient prescription that requires the (analytical) inversion of a small matrix. For a regular particle distribution, this improves gradient accuracies by approximately 10 orders of magnitude and the SPH formulations with this gradient outperform the standard approach in all benchmark tests. Secondly, we demonstrate that a simple change of the kernel function can substantially increase the accuracy of an SPH scheme. While the `standard' cubic spline kernel generally performs poorly, the best overall performance is found for a high-order Wendland kernel which allows for only very little velocity noise and enforces a very regular particle distribution, even in highly dynamical tests. Thirdly, we explore new SPH volume elements that enhance the treatment of fluid instabilities and, last, but not least, we design new dissipation triggers. They switch on near shocks and in regions where the flow - without dissipation - starts to become noisy. The resulting new SPH formulation yields excellent results even in challenging tests where standard techniques fail completely.

  6. Molecular definition of red cell Rh haplotypes by tightly linked SphI RFLPs

    SciTech Connect

    Huang, C.H.; Reid, M.E.; Chen, Y.

    1996-01-01

    The Rh blood group system of human red cells contains five major antigens D, C/c, and E/e (the latter four designated {open_quotes}non-D{close_quotes}) that are specified by eight gene complexes known as Rh haplotypes. In this paper, we report on the mapping of the RH locus and identification of a set of SphI RFLPs that are tightly linked with the Rh structural genes. Using exon-specific probes, we have localized the SphI cleavage sites resulting in these DNA markers and derived a comprehensive map for the RH locus. It was found that the SphI fragments encompassing exons 4-7 of the Rh genes occur in four banding patterns or frameworks that correspond to the distribution and segregation of the common Rh haplotypes. This linkage disequilibrium allowed a genotype-phenotype correlation and direct determination of Rh zygosity related to the Rh-positive or Rh-negative status (D/D, D/d, and d/d). Studies on the occurrence of SphI RFLPs in a number of rare Rh variants indicated that Rh phenotypic diversity has taken place on different haplotype backgrounds and has arisen by diverse genetic mechanisms. The molecular definition of Rh haplotypes by SphI RFLP frameworks should provide a useful procedure for genetic counseling and prenatal assessment of Rh alloimmunization. 32 refs., 7 figs., 3 tabs.

  7. Molecular definition of red cell Rh haplotypes by tightly linked SphI RFLPs.

    PubMed

    Huang, C H; Reid, M E; Chen, Y; Coghlan, G; Okubo, Y

    1996-01-01

    The Rh blood group system of human red cells contains five major antigens D, C/c, and E/e (the latter four designated "non-D") that are specified by eight gene complexes known as Rh haplotypes. In this paper, we report on the mapping of RH locus and identification of a set of SphI RFLPs that are tightly linked with the Rh structural genes. Using exon-specific probes, we have localized the SphI cleavage sites resulting in these DNA markers and derived a comprehensive map for the RH locus. It was found that the SphI fragments encompassing exons 4-7 of the Rh genes occur in four banding patterns or frameworks that correspond to the distribution and segregation of the common Rh haplotypes. This linkage disequilibrium allowed a genotype-phenotype correlation and direct determination of Rh zygosity related to the Rh-positive or Rh-negative status (D/D, D/d, and d/d). Studies on the occurrence of SphI RFLPs in a number of rare Rh variants indicated that Rh phenotypic diversity has taken place on different haplotype backgrounds and has arisen by diverse genetic mechanisms. The molecular definition of Rh haplotypes by SphI RFLP frameworks should provide a useful procedure for genetic counseling and prenatal assessment of Rh alloimmunization.

  8. Pathological roles of the VEGF/SphK pathway in Niemann–Pick type C neurons

    PubMed Central

    Lee, Hyun; Lee, Jong Kil; Park, Min Hee; Hong, Yu Ri; Marti, Hugo H.; Kim, Hyongbum; Okada, Yohei; Otsu, Makoto; Seo, Eul-Ju; Park, Jae-Hyung; Bae, Jae-Hoon; Okino, Nozomu; He, Xingxuan; Schuchman, Edward H.; Bae, Jae-sung; Jin, Hee Kyung

    2014-01-01

    Sphingosine is a major storage compound in Niemann–Pick type C disease (NP–C), although the pathological role(s) of this accumulation have not been fully characterized. Here we found that sphingosine kinase (SphK) activity is reduced in NP–C patient fibroblasts and NP–C mouse Purkinje neurons (PNs) due to defective vascular endothelial growth factor (VEGF) levels. Sphingosine accumulation due to inactivation of VEGF/SphK pathway led to PNs loss via inhibition of autophagosome–lysosome fusion in NP–C mice. VEGF activates SphK by binding to VEGFR2, resulting in decreased sphingosine storage as well as improved PNs survival and clinical outcomes in NP–C cells and mice. We also show that induced pluripotent stem cell (iPSC)-derived human NP–C neurons are generated and the abnormalities caused by VEGF/SphK inactivity in these cells are corrected by replenishment of VEGF. Overall, these results reveal a pathogenic mechanism in NP–C neurons where defective SphK activity is due to impaired VEGF levels. PMID:25417698

  9. Pathological roles of the VEGF/SphK pathway in Niemann-Pick type C neurons.

    PubMed

    Lee, Hyun; Lee, Jong Kil; Park, Min Hee; Hong, Yu Ri; Marti, Hugo H; Kim, Hyongbum; Okada, Yohei; Otsu, Makoto; Seo, Eul-Ju; Park, Jae-Hyung; Bae, Jae-Hoon; Okino, Nozomu; He, Xingxuan; Schuchman, Edward H; Bae, Jae-Sung; Jin, Hee Kyung

    2014-01-01

    Sphingosine is a major storage compound in Niemann-Pick type C disease (NP-C), although the pathological role(s) of this accumulation have not been fully characterized. Here we found that sphingosine kinase (SphK) activity is reduced in NP-C patient fibroblasts and NP-C mouse Purkinje neurons (PNs) due to defective vascular endothelial growth factor (VEGF) levels. Sphingosine accumulation due to inactivation of VEGF/SphK pathway led to PNs loss via inhibition of autophagosome-lysosome fusion in NP-C mice. VEGF activates SphK by binding to VEGFR2, resulting in decreased sphingosine storage as well as improved PNs survival and clinical outcomes in NP-C cells and mice. We also show that induced pluripotent stem cell (iPSC)-derived human NP-C neurons are generated and the abnormalities caused by VEGF/SphK inactivity in these cells are corrected by replenishment of VEGF. Overall, these results reveal a pathogenic mechanism in NP-C neurons where defective SphK activity is due to impaired VEGF levels. PMID:25417698

  10. 2D materials for nanophotonic devices

    NASA Astrophysics Data System (ADS)

    Xu, Renjing; Yang, Jiong; Zhang, Shuang; Pei, Jiajie; Lu, Yuerui

    2015-12-01

    Two-dimensional (2D) materials have become very important building blocks for electronic, photonic, and phononic devices. The 2D material family has four key members, including the metallic graphene, transition metal dichalcogenide (TMD) layered semiconductors, semiconducting black phosphorous, and the insulating h-BN. Owing to the strong quantum confinements and defect-free surfaces, these atomically thin layers have offered us perfect platforms to investigate the interactions among photons, electrons and phonons. The unique interactions in these 2D materials are very important for both scientific research and application engineering. In this talk, I would like to briefly summarize and highlight the key findings, opportunities and challenges in this field. Next, I will introduce/highlight our recent achievements. We demonstrated atomically thin micro-lens and gratings using 2D MoS2, which is the thinnest optical component around the world. These devices are based on our discovery that the elastic light-matter interactions in highindex 2D materials is very strong. Also, I would like to introduce a new two-dimensional material phosphorene. Phosphorene has strongly anisotropic optical response, which creates 1D excitons in a 2D system. The strong confinement in phosphorene also enables the ultra-high trion (charged exciton) binding energies, which have been successfully measured in our experiments. Finally, I will briefly talk about the potential applications of 2D materials in energy harvesting.

  11. Internal Photoemission Spectroscopy of 2-D Materials

    NASA Astrophysics Data System (ADS)

    Nguyen, Nhan; Li, Mingda; Vishwanath, Suresh; Yan, Rusen; Xiao, Shudong; Xing, Huili; Cheng, Guangjun; Hight Walker, Angela; Zhang, Qin

    Recent research has shown the great benefits of using 2-D materials in the tunnel field-effect transistor (TFET), which is considered a promising candidate for the beyond-CMOS technology. The on-state current of TFET can be enhanced by engineering the band alignment of different 2D-2D or 2D-3D heterostructures. Here we present the internal photoemission spectroscopy (IPE) approach to determine the band alignments of various 2-D materials, in particular SnSe2 and WSe2, which have been proposed for new TFET designs. The metal-oxide-2-D semiconductor test structures are fabricated and characterized by IPE, where the band offsets from the 2-D semiconductor to the oxide conduction band minimum are determined by the threshold of the cube root of IPE yields as a function of photon energy. In particular, we find that SnSe2 has a larger electron affinity than most semiconductors and can be combined with other semiconductors to form near broken-gap heterojunctions with low barrier heights which can produce a higher on-state current. The details of data analysis of IPE and the results from Raman spectroscopy and spectroscopic ellipsometry measurements will also be presented and discussed.

  12. Identification of a serine proteinase homolog (Sp-SPH) involved in immune defense in the mud crab Scylla paramamosain.

    PubMed

    Zhang, Qiu-xia; Liu, Hai-peng; Chen, Rong-yuan; Shen, Kai-li; Wang, Ke-jian

    2013-01-01

    Clip domain serine proteinase homologs are involved in many biological processes including immune response. To identify the immune function of a serine proteinase homolog (Sp-SPH), originally isolated from hemocytes of the mud crab, Scylla paramamosain, the Sp-SPH was expressed recombinantly and purified for further studies. It was found that the Sp-SPH protein could bind to a number of bacteria (including Aeromonas hydrophila, Escherichia coli, Staphylococcus aureus, Vibrio fluvialis, Vibrio harveyi and Vibrio parahemolyticus), bacterial cell wall components such as lipopolysaccharide or peptidoglycan (PGN), and β-1, 3-glucan of fungus. But no direct antibacterial activity of Sp-SPH protein was shown by using minimum inhibitory concentration or minimum bactericidal concentration assays. Nevertheless, the Sp-SPH protein was found to significantly enhance the crab hemocyte adhesion activity (paired t-test, P<0.05), and increase phenoloxidase activity if triggered by PGN in vitro (paired t-test, P<0.05). Importantly, the Sp-SPH protein was demonstrated to promote the survival rate of the animals after challenge with A. hydrophila or V. parahemolyticus which were both recognized by Sp-SPH protein, if pre-incubated with Sp-SPH protein, respectively. Whereas, the crabs died much faster when challenged with Vibrio alginolyiicus, a pathogenic bacterium not recognized by Sp-SPH protein, compared to those of crabs challenged with A. hydrophila or V. parahemolyticus when pre-coated with Sp-SPH protein. Taken together, these data suggested that Sp-SPH molecule might play an important role in immune defense against bacterial infection in the mud crab S. paramamosain.

  13. 2D materials: to graphene and beyond.

    PubMed

    Mas-Ballesté, Rubén; Gómez-Navarro, Cristina; Gómez-Herrero, Julio; Zamora, Félix

    2011-01-01

    This review is an attempt to illustrate the different alternatives in the field of 2D materials. Graphene seems to be just the tip of the iceberg and we show how the discovery of alternative 2D materials is starting to show the rest of this iceberg. The review comprises the current state-of-the-art of the vast literature in concepts and methods already known for isolation and characterization of graphene, and rationalizes the quite disperse literature in other 2D materials such as metal oxides, hydroxides and chalcogenides, and metal-organic frameworks.

  14. Enhanced detectability of small objects in correlated clutter using an improved 2-D adaptive lattice algorithm.

    PubMed

    Ffrench, P A; Zeidler, J H; Ku, W H

    1997-01-01

    Two-dimensional (2-D) adaptive filtering is a technique that can be applied to many image processing applications. This paper will focus on the development of an improved 2-D adaptive lattice algorithm (2-D AL) and its application to the removal of correlated clutter to enhance the detectability of small objects in images. The two improvements proposed here are increased flexibility in the calculation of the reflection coefficients and a 2-D method to update the correlations used in the 2-D AL algorithm. The 2-D AL algorithm is shown to predict correlated clutter in image data and the resulting filter is compared with an ideal Wiener-Hopf filter. The results of the clutter removal will be compared to previously published ones for a 2-D least mean square (LMS) algorithm. 2-D AL is better able to predict spatially varying clutter than the 2-D LMS algorithm, since it converges faster to new image properties. Examples of these improvements are shown for a spatially varying 2-D sinusoid in white noise and simulated clouds. The 2-D LMS and 2-D AL algorithms are also shown to enhance a mammogram image for the detection of small microcalcifications and stellate lesions.

  15. 2-d Finite Element Code Postprocessor

    1996-07-15

    ORION is an interactive program that serves as a postprocessor for the analysis programs NIKE2D, DYNA2D, TOPAZ2D, and CHEMICAL TOPAZ2D. ORION reads binary plot files generated by the two-dimensional finite element codes currently used by the Methods Development Group at LLNL. Contour and color fringe plots of a large number of quantities may be displayed on meshes consisting of triangular and quadrilateral elements. ORION can compute strain measures, interface pressures along slide lines, reaction forcesmore » along constrained boundaries, and momentum. ORION has been applied to study the response of two-dimensional solids and structures undergoing finite deformations under a wide variety of large deformation transient dynamic and static problems and heat transfer analyses.« less

  16. Matrix models of 2d gravity

    SciTech Connect

    Ginsparg, P.

    1991-01-01

    These are introductory lectures for a general audience that give an overview of the subject of matrix models and their application to random surfaces, 2d gravity, and string theory. They are intentionally 1.5 years out of date.

  17. Matrix models of 2d gravity

    SciTech Connect

    Ginsparg, P.

    1991-12-31

    These are introductory lectures for a general audience that give an overview of the subject of matrix models and their application to random surfaces, 2d gravity, and string theory. They are intentionally 1.5 years out of date.

  18. Brittle damage models in DYNA2D

    SciTech Connect

    Faux, D.R.

    1997-09-01

    DYNA2D is an explicit Lagrangian finite element code used to model dynamic events where stress wave interactions influence the overall response of the system. DYNA2D is often used to model penetration problems involving ductile-to-ductile impacts; however, with the advent of the use of ceramics in the armor-anti-armor community and the need to model damage to laser optics components, good brittle damage models are now needed in DYNA2D. This report will detail the implementation of four brittle damage models in DYNA2D, three scalar damage models and one tensor damage model. These new brittle damage models are then used to predict experimental results from three distinctly different glass damage problems.

  19. Application of PCDA/SPH/CHO/Lysine vesicles to detect pathogenic bacteria in chicken.

    PubMed

    de Oliveira, Taíla V; Soares, Nilda de F F; de Andrade, Nélio J; Silva, Deusanilde J; Medeiros, Eber Antônio A; Badaró, Amanda T

    2015-04-01

    During the course of infection, Salmonella must successively survive the harsh acid stress of the stomach and multiply into a mild acidic compartment within macrophages. Inducible amino acid decarboxylases are known to promote adaptation to acidic environments, as lysine decarboxylation to cadaverine. The idea of Salmonella defenses responses could be employed in systems as polydiacetylene (PDA) to detect this pathogen so important to public health system. Beside that PDA is an important substance because of the unique optical property; that undergoes a colorimetric transitions by various external stimuli. Therefore 10,12-pentacosadyinoic acid (PCDA)/Sphingomyelin(SPH)/Cholesterol(CHO)/Lysine system was tested to determine the colorimetric response induced by Salmonella choleraesuis. PCDA/SPH/CHO/Lysine vesicles showed a colour change even in low S. choleraesuis concentration present in laboratory conditions and in chicken meat. Thus, this work showed a PCDA/SPH/CHO/Lysine vesicle application to simplify routine analyses in food industry, as chicken meat industry.

  20. SPH based modelling of oxide and oxide film formation in gravity die castings

    NASA Astrophysics Data System (ADS)

    Ellingsen, K.; Coudert, T.; M'Hamdi, M.

    2015-06-01

    Gravity die casting is an important casting process which has the capability of making complicated, high-integrity components for e.g. the automotive industry. Oxides and oxide films formed during filling affect the cast product quality. The Smoothed particle hydrodynamics (SPH) method is particularly suited to follow complex flows. The SPH method has been used to study filling of a gravity die including the formation and transport of oxides and oxide films for two different filling velocities. A low inlet velocity leads to a higher amount of oxides and oxide films in the casting. The study demonstrates the usefulness of the SPH method for an increased understanding of the effect of different filling procedures on the cast quality.

  1. Ursa Minor dSph galaxy: Updated census of RR Lyrae stars

    NASA Astrophysics Data System (ADS)

    Kinemuchi, K.; Grabowski, K.; Kuehn, C.; Nemec, J.

    2016-05-01

    We present our observations and photometric results of the Ursa Minor dwarf spheroidal galaxy (UMi dSph). Observations were taken at the Apache Point Observatory 0.5m ARCSAT telescope in 2014. We identify previously known RR Lyrae stars in the field of view, and also catalog other variable star candidates for which tentative classifications are provided. We have performed a period search for the known and new variable stars. Our ultimate goal is to create an updated catalog of variable stars in the UMi dSph and to compare the RR Lyrae stellar characteristics to other RR Lyrae stars found in Local Group dSph galaxies. The comparisons can give us insights to the near-field cosmology of the Local Group.

  2. Chemical Approaches to 2D Materials.

    PubMed

    Samorì, Paolo; Palermo, Vincenzo; Feng, Xinliang

    2016-08-01

    Chemistry plays an ever-increasing role in the production, functionalization, processing and applications of graphene and other 2D materials. This special issue highlights a selection of enlightening chemical approaches to 2D materials, which nicely reflect the breadth of the field and convey the excitement of the individuals involved in it, who are trying to translate graphene and related materials from the laboratory into a real, high-impact technology. PMID:27478083

  3. Chemical Approaches to 2D Materials.

    PubMed

    Samorì, Paolo; Palermo, Vincenzo; Feng, Xinliang

    2016-08-01

    Chemistry plays an ever-increasing role in the production, functionalization, processing and applications of graphene and other 2D materials. This special issue highlights a selection of enlightening chemical approaches to 2D materials, which nicely reflect the breadth of the field and convey the excitement of the individuals involved in it, who are trying to translate graphene and related materials from the laboratory into a real, high-impact technology.

  4. 2D OR NOT 2D: THE EFFECT OF DIMENSIONALITY ON THE DYNAMICS OF FINGERING CONVECTION AT LOW PRANDTL NUMBER

    SciTech Connect

    Garaud, Pascale; Brummell, Nicholas

    2015-12-10

    Fingering convection (otherwise known as thermohaline convection) is an instability that occurs in stellar radiative interiors in the presence of unstable compositional gradients. Numerical simulations have been used in order to estimate the efficiency of mixing induced by this instability. However, fully three-dimensional (3D) computations in the parameter regime appropriate for stellar astrophysics (i.e., low Prandtl number) are prohibitively expensive. This raises the question of whether two-dimensional (2D) simulations could be used instead to achieve the same goals. In this work, we address this issue by comparing the outcome of 2D and 3D simulations of fingering convection at low Prandtl number. We find that 2D simulations are never appropriate. However, we also find that the required 3D computational domain does not have to be very wide: the third dimension only needs to contain a minimum of two wavelengths of the fastest-growing linearly unstable mode to capture the essentially 3D dynamics of small-scale fingering. Narrow domains, however, should still be used with caution since they could limit the subsequent development of any large-scale dynamics typically associated with fingering convection.

  5. 2D or Not 2D: The Effect of Dimensionality on the Dynamics of Fingering Convection at Low Prandtl Number

    NASA Astrophysics Data System (ADS)

    Garaud, Pascale; Brummell, Nicholas

    2015-12-01

    Fingering convection (otherwise known as thermohaline convection) is an instability that occurs in stellar radiative interiors in the presence of unstable compositional gradients. Numerical simulations have been used in order to estimate the efficiency of mixing induced by this instability. However, fully three-dimensional (3D) computations in the parameter regime appropriate for stellar astrophysics (i.e., low Prandtl number) are prohibitively expensive. This raises the question of whether two-dimensional (2D) simulations could be used instead to achieve the same goals. In this work, we address this issue by comparing the outcome of 2D and 3D simulations of fingering convection at low Prandtl number. We find that 2D simulations are never appropriate. However, we also find that the required 3D computational domain does not have to be very wide: the third dimension only needs to contain a minimum of two wavelengths of the fastest-growing linearly unstable mode to capture the essentially 3D dynamics of small-scale fingering. Narrow domains, however, should still be used with caution since they could limit the subsequent development of any large-scale dynamics typically associated with fingering convection.

  6. Application of SALSSA Framework to the Validation of Smoothed Particle Hydrodynamics Simulations of Low Reynolds Number Flows

    SciTech Connect

    Schuchardt, Karen L.; Chase, Jared M.; Daily, Jeffrey A.; Elsethagen, Todd O.; Palmer, Bruce J.; Scheibe, Timothy D.

    2009-06-15

    The Support Architecture for Large-Scale Subsurface Analysis (SALSSA) provides an extensible framework, sophisticated graphical user interface (GUI), and underlying data management system that simplifies the process of running subsurface models, tracking provenance information, and analyzing the model results. The SALSSA software framework is currently being applied to validating the Smoothed Particle Hydrodynamics (SPH) model. SPH is a three-dimensional model of flow and transport in porous media at the pore scale. Fluid flow in porous media at velocities common in natural porous media occur at low Reynolds numbers and therefore it is important to verify that the SPH model is producing accurate flow solutions in this regime. Validating SPH requires performing a series of simulations and comparing these simulation flow solutions to analytical results or numerical results using other methods. This validation study is being facilitated by the SALLSA framework, which provides capabilities to setup, execute, analyze, and administer these SPH simulations.

  7. 2d index and surface operators

    NASA Astrophysics Data System (ADS)

    Gadde, Abhijit; Gukov, Sergei

    2014-03-01

    In this paper we compute the superconformal index of 2d (2, 2) supersymmetric gauge theories. The 2d superconformal index, a.k.a. flavored elliptic genus, is computed by a unitary matrix integral much like the matrix integral that computes the 4d superconformal index. We compute the 2d index explicitly for a number of examples. In the case of abelian gauge theories we see that the index is invariant under flop transition and under CY-LG correspondence. The index also provides a powerful check of the Seiberg-type duality for non-abelian gauge theories discovered by Hori and Tong. In the later half of the paper, we study half-BPS surface operators in = 2 super-conformal gauge theories. They are engineered by coupling the 2d (2, 2) supersymmetric gauge theory living on the support of the surface operator to the 4d = 2 theory, so that different realizations of the same surface operator with a given Levi type are related by a 2d analogue of the Seiberg duality. The index of this coupled system is computed by using the tools developed in the first half of the paper. The superconformal index in the presence of surface defect is expected to be invariant under generalized S-duality. We demonstrate that it is indeed the case. In doing so the Seiberg-type duality of the 2d theory plays an important role.

  8. Local Group dSph radio survey with ATCA (III): constraints on particle dark matter

    SciTech Connect

    Regis, Marco; Colafrancesco, Sergio; Profumo, Stefano; De Blok, W.J.G.; Massardi, Marcella; Richter, Laura E-mail: sergio.colafrancesco@wits.ac.za E-mail: blok@astron.nl E-mail: laura@ska.ac.za

    2014-10-01

    We performed a deep search for radio synchrotron emissions induced by weakly interacting massive particles (WIMPs) annihilation or decay in six dwarf spheroidal (dSph) galaxies of the Local Group. Observations were conducted with the Australia Telescope Compact Array (ATCA) at 16 cm wavelength, with an rms sensitivity better than 0.05 mJy/beam in each field. In this work, we first discuss the uncertainties associated with the modeling of the expected signal, such as the shape of the dark matter (DM) profile and the dSph magnetic properties. We then investigate the possibility that point-sources detected in the proximity of the dSph optical center might be due to the emission from a DM cuspy profile. No evidence for an extended emission over a size of few arcmin (which is the DM halo size) has been detected. We present the associated bounds on the WIMP parameter space for different annihilation/decay final states and for different astrophysical assumptions. If the confinement of electrons and positrons in the dSph is such that the majority of their power is radiated within the dSph region, we obtain constraints on the WIMP annihilation rate which are well below the thermal value for masses up to few TeV. On the other hand, for conservative assumptions on the dSph magnetic properties, the bounds can be dramatically relaxed. We show however that, within the next 10 years and regardless of the astrophysical assumptions, it will be possible to progressively close in on the full parameter space of WIMPs by searching for radio signals in dSphs with SKA and its precursors.

  9. Improving VERITAS sensitivity by fitting 2D Gaussian image parameters

    NASA Astrophysics Data System (ADS)

    Christiansen, Jodi; VERITAS Collaboration

    2012-12-01

    Our goal is to improve the acceptance and angular resolution of VERITAS by implementing a camera image-fitting algorithm. Elliptical image parameters are extracted from 2D Gaussian distribution fits using a χ2 minimization instead of the standard technique based on the principle moments of an island of pixels above threshold. We optimize the analysis cuts and then characterize the improvements using simulations. We find an improvement of 20% less observing time to reach 5-sigma for weak point sources.

  10. An inverse design method for 2D airfoil

    NASA Astrophysics Data System (ADS)

    Liang, Zhi-Yong; Cui, Peng; Zhang, Gen-Bao

    2010-03-01

    The computational method for aerodynamic design of aircraft is applied more universally than before, in which the design of an airfoil is a hot problem. The forward problem is discussed by most relative papers, but inverse method is more useful in practical designs. In this paper, the inverse design of 2D airfoil was investigated. A finite element method based on the variational principle was used for carrying out. Through the simulation, it was shown that the method was fit for the design.

  11. Water pipe flow simulation using improved virtual particles on smoothed particle hydrodynamics

    NASA Astrophysics Data System (ADS)

    Ting, E. S.; Yeak, S. H.

    2014-12-01

    Smoothed Particle Hydrodynamics (SPH) is a meshless method used widely to solve problems such as fluid flows. Due to its meshless property, it is ideal to solve problems on complex geometry. In this paper, boundary treatment were implied for the rectangular pipe flow simulations using SPH. The repulsive force is applied to the boundary particles along with the improved virtual particles on different geometry alignment. The water flow is solved using incompressible SPH and will be examined throughout the simulation. Results from this simulation will be compared with single layered virtual particles. Based on the result of the study, it is found that the improved virtual particles is more accurate and stable.

  12. Laboratory Experiments On Continually Forced 2d Turbulence

    NASA Astrophysics Data System (ADS)

    Wells, M. G.; Clercx, H. J. H.; Van Heijst, G. J. F.

    There has been much recent interest in the advection of tracers by 2D turbulence in geophysical flows. While there is a large body of literature on decaying 2D turbulence or forced 2D turbulence in unbounded domains, there have been very few studies of forced turbulence in bounded domains. In this study we present new experimental results from a continuously forced quasi 2D turbulent field. The experiments are performed in a square Perspex tank filled with water. The flow is made quasi 2D by a steady background rotation. The rotation rate of the tank has a small (<8 %) sinusoidal perturbation which leads to the periodic formation of eddies in the corners of the tank. When the oscillation period of the perturbation is greater than an eddy roll-up time-scale, dipole structures are observed to form. The dipoles can migrate away from the walls, and the interior of the tank is continually filled with vortexs. From experimental visualizations the length scale of the vortexs appears to be largely controlled by the initial formation mechanism and large scale structures are not observed to form at large times. Thus the experiments provide a simple way of cre- ating a continuously forced 2D turbulent field. The resulting structures are in contrast with most previous laboratory experiments on 2D turbulence which have investigated decaying turbulence and have observed the formations of large scale structure. In these experiments, decaying turbulence had been produced by a variety of methods such as the decaying turbulence in the wake of a comb of rods (Massen et al 1999), organiza- tion of vortices in thin conducting liquids (Cardoso et al 1994) or in rotating systems where there are sudden changes in angular rotation rate (Konijnenberg et al 1998). Results of dye visualizations, particle tracking experiments and a direct numerical simulation will be presented and discussed in terms of their oceanographic application. Bibliography Cardoso,O. Marteau, D. &Tabeling, P

  13. Numerical Modeling of Tsunami Bore Attenuation and Extreme Hydrodynamic Impact Forces Using the SPH Method

    NASA Astrophysics Data System (ADS)

    Piche, Steffanie

    Understanding the impact of coastal forests on the propagation of rapidly advancing onshore tsunami bores is difficult due to complexity of this phenomenon and the large amount of parameters which must be considered. The research presented in the thesis focuses on understanding the protective effect of the coastal forest on the forces generated by the tsunami and its ability to reduce the propagation and velocity of the incoming tsunami bore. Concern for this method of protecting the coast from tsunamis is based on the effectiveness of the forest and its ability to withstand the impact forces caused by both the bore and the debris carried along by it. The devastation caused by the tsunami has been investigated in recent examples such as the 2011 Tohoku Tsunami in Japan and the Indian Ocean Tsunami which occurred in 2004. This research examines the reduction of the spatial extent of the tsunami bore inundation and runup due to the presence of the coastal forest, and attempts to quantify the impact forces induced by the tsunami bores and debris impact on the structures. This research work was performed using a numerical model based on the Smoothed Particle Hydrodynamics (SPH) method which is a single-phase three-dimensional model. The simulations performed in this study were separated into three sections. The first section focused on the reduction of the extent of the tsunami inundation and the magnitude of the bore velocity by the coastal forest. This section included the analysis of the hydrodynamic forces acting on the individual trees. The second section involved the numerical modeling of some of the physical laboratory experiments performed by researchers at the University of Ottawa, in cooperation with colleagues from the Ocean, Coastal and River Engineering Lab at the National Research Council, Ottawa, in an attempt to validate the movement and impact forces of floating driftwood on a column. The final section modeled the movement and impact of floating debris

  14. Evaluation of superporous hydrogel (SPH) and SPH composite in porcine intestine ex-vivo: assessment of drug transport, morphology effect, and mechanical fixation to intestinal wall.

    PubMed

    Dorkoosh, Farid A; Borchard, Gerrit; Rafiee-Tehrani, Morteza; Verhoef, J Coos; Junginger, Hans E

    2002-03-01

    The objective of this study was to investigate the potential of superporous hydrogel (SPH) and SPH composite (SPHC) polymers to enhance the transport of N-alpha-benzoyl-L-arginine ethylester (BAEE) and fluorescein isothiocyanate-dextran 4400 (FD4) across porcine intestinal epithelium ex-vivo, and to study any possible morphological damage to the epithelium by applying these polymers. In addition, the ability of these polymers to attach to the gut wall by mechanical pressure was examined by using a specifically designed centrifuge model. The transport of BAEE and FD4 across the intestinal mucosa was enhanced 2- to 3-fold by applying SPHC polymer in comparison to negative control. No significant morphological damage was observed by applying these polymers inside the intestinal lumen. Moreover, the SPH and SPHC polymers were able to attach mechanically to the intestinal wall by swelling and did not move in the intestinal lumen even when a horizontal force of 13 gms(-2) was applied. In conclusion, these polymers are appropriate vehicles for enhancing the intestinal absorption of peptide and protein drugs.

  15. Orthotropic Piezoelectricity in 2D Nanocellulose

    NASA Astrophysics Data System (ADS)

    García, Y.; Ruiz-Blanco, Yasser B.; Marrero-Ponce, Yovani; Sotomayor-Torres, C. M.

    2016-10-01

    The control of electromechanical responses within bonding regions is essential to face frontier challenges in nanotechnologies, such as molecular electronics and biotechnology. Here, we present Iβ-nanocellulose as a potentially new orthotropic 2D piezoelectric crystal. The predicted in-layer piezoelectricity is originated on a sui-generis hydrogen bonds pattern. Upon this fact and by using a combination of ab-initio and ad-hoc models, we introduce a description of electrical profiles along chemical bonds. Such developments lead to obtain a rationale for modelling the extended piezoelectric effect originated within bond scales. The order of magnitude estimated for the 2D Iβ-nanocellulose piezoelectric response, ~pm V‑1, ranks this material at the level of currently used piezoelectric energy generators and new artificial 2D designs. Such finding would be crucial for developing alternative materials to drive emerging nanotechnologies.

  16. Orthotropic Piezoelectricity in 2D Nanocellulose

    PubMed Central

    García, Y.; Ruiz-Blanco, Yasser B.; Marrero-Ponce, Yovani; Sotomayor-Torres, C. M.

    2016-01-01

    The control of electromechanical responses within bonding regions is essential to face frontier challenges in nanotechnologies, such as molecular electronics and biotechnology. Here, we present Iβ-nanocellulose as a potentially new orthotropic 2D piezoelectric crystal. The predicted in-layer piezoelectricity is originated on a sui-generis hydrogen bonds pattern. Upon this fact and by using a combination of ab-initio and ad-hoc models, we introduce a description of electrical profiles along chemical bonds. Such developments lead to obtain a rationale for modelling the extended piezoelectric effect originated within bond scales. The order of magnitude estimated for the 2D Iβ-nanocellulose piezoelectric response, ~pm V−1, ranks this material at the level of currently used piezoelectric energy generators and new artificial 2D designs. Such finding would be crucial for developing alternative materials to drive emerging nanotechnologies. PMID:27708364

  17. 2D microwave imaging reflectometer electronics

    SciTech Connect

    Spear, A. G.; Domier, C. W. Hu, X.; Muscatello, C. M.; Ren, X.; Luhmann, N. C.; Tobias, B. J.

    2014-11-15

    A 2D microwave imaging reflectometer system has been developed to visualize electron density fluctuations on the DIII-D tokamak. Simultaneously illuminated at four probe frequencies, large aperture optics image reflections from four density-dependent cutoff surfaces in the plasma over an extended region of the DIII-D plasma. Localized density fluctuations in the vicinity of the plasma cutoff surfaces modulate the plasma reflections, yielding a 2D image of electron density fluctuations. Details are presented of the receiver down conversion electronics that generate the in-phase (I) and quadrature (Q) reflectometer signals from which 2D density fluctuation data are obtained. Also presented are details on the control system and backplane used to manage the electronics as well as an introduction to the computer based control program.

  18. Optical modulators with 2D layered materials

    NASA Astrophysics Data System (ADS)

    Sun, Zhipei; Martinez, Amos; Wang, Feng

    2016-04-01

    Light modulation is an essential operation in photonics and optoelectronics. With existing and emerging technologies increasingly demanding compact, efficient, fast and broadband optical modulators, high-performance light modulation solutions are becoming indispensable. The recent realization that 2D layered materials could modulate light with superior performance has prompted intense research and significant advances, paving the way for realistic applications. In this Review, we cover the state of the art of optical modulators based on 2D materials, including graphene, transition metal dichalcogenides and black phosphorus. We discuss recent advances employing hybrid structures, such as 2D heterostructures, plasmonic structures, and silicon and fibre integrated structures. We also take a look at the future perspectives and discuss the potential of yet relatively unexplored mechanisms, such as magneto-optic and acousto-optic modulation.

  19. Inkjet printing of 2D layered materials.

    PubMed

    Li, Jiantong; Lemme, Max C; Östling, Mikael

    2014-11-10

    Inkjet printing of 2D layered materials, such as graphene and MoS2, has attracted great interests for emerging electronics. However, incompatible rheology, low concentration, severe aggregation and toxicity of solvents constitute critical challenges which hamper the manufacturing efficiency and product quality. Here, we introduce a simple and general technology concept (distillation-assisted solvent exchange) to efficiently overcome these challenges. By implementing the concept, we have demonstrated excellent jetting performance, ideal printing patterns and a variety of promising applications for inkjet printing of 2D layered materials. PMID:25169938

  20. Inkjet printing of 2D layered materials.

    PubMed

    Li, Jiantong; Lemme, Max C; Östling, Mikael

    2014-11-10

    Inkjet printing of 2D layered materials, such as graphene and MoS2, has attracted great interests for emerging electronics. However, incompatible rheology, low concentration, severe aggregation and toxicity of solvents constitute critical challenges which hamper the manufacturing efficiency and product quality. Here, we introduce a simple and general technology concept (distillation-assisted solvent exchange) to efficiently overcome these challenges. By implementing the concept, we have demonstrated excellent jetting performance, ideal printing patterns and a variety of promising applications for inkjet printing of 2D layered materials.

  1. Incompressible-compressible flows with a transient discontinuous interface using smoothed particle hydrodynamics (SPH)

    NASA Astrophysics Data System (ADS)

    Lind, S. J.; Stansby, P. K.; Rogers, B. D.

    2016-03-01

    A new two-phase incompressible-compressible Smoothed Particle Hydrodynamics (SPH) method has been developed where the interface is discontinuous in density. This is applied to water-air problems with a large density difference. The incompressible phase requires surface pressure from the compressible phase and the compressible phase requires surface velocity from the incompressible phase. Compressible SPH is used for the air phase (with the isothermal stiffened ideal gas equation of state for low Mach numbers) and divergence-free (projection based) incompressible SPH is used for the water phase, with the addition of Fickian shifting to produce sufficiently homogeneous particle distributions to enable stable, accurate, converged solutions without noise in the pressure field. Shifting is a purely numerical particle regularisation device. The interface remains a true material discontinuity at a high density ratio with continuous pressure and velocity at the interface. This approach with the physics of compressibility and incompressibility represented is novel within SPH and is validated against semi-analytical results for a two-phase elongating and oscillating water drop, analytical results for low amplitude inviscid standing waves, the Kelvin-Helmholtz instability, and a dam break problem with high interface distortion and impact on a vertical wall where experimental and other numerical results are available.

  2. Numerical Simulation of Crater Creating Process in Dynamic Replacement Method by Smooth Particle Hydrodynamics

    NASA Astrophysics Data System (ADS)

    Danilewicz, Andrzej; Sikora, Zbigniew

    2015-02-01

    A theoretical base of SPH method, including the governing equations, discussion of importance of the smoothing function length, contact formulation, boundary treatment and finally utilization in hydrocode simulations are presented. An application of SPH to a real case of large penetrations (crater creating) into the soil caused by falling mass in Dynamic Replacement Method is discussed. An influence of particles spacing on method accuracy is presented. An example calculated by LS-DYNA software is discussed. Chronological development of Smooth Particle Hydrodynamics is presented. Theoretical basics of SPH method stability and consistency in SPH formulation, artificial viscosity and boundary treatment are discussed. Time integration techniques with stability conditions, SPH+FEM coupling, constitutive equation and equation of state (EOS) are presented as well.

  3. Inclusion complexes of PBN-type nitrone spin traps and their superoxide spin adducts with cyclodextrin derivatives: parallel determination of the association constants by NMR titrations and 2D-EPR simulations.

    PubMed

    Bardelang, David; Rockenbauer, Antal; Karoui, Hakim; Finet, Jean-Pierre; Tordo, Paul

    2005-05-26

    (1)H NMR and electron paramagnetic resonance (EPR) titrations were used to determine the association constants of the complexes of alpha-phenyl-N-tert-butylnitrone (PBN) analogues and their superoxide spin adducts, respectively, with methylated beta-cyclodextrins. A 1:1 stoichiometry for the nitrones with randomly methylated beta-cyclodextrin and 2,6-di-O-methyl-beta-cyclodextrin and 1:1 and 1:2 stoichiometries for the corresponding cyclodextrin-nitroxide complexes were observed. After the superoxide radical spin trapping reaction, EPR titrations afforded the association constants of the corresponding cyclodextrin-nitroxide complexes. Two-dimensional EPR simulations indicated a bimodal inclusion of the nitroxide free radical spin adducts into the cyclodextrins. For all the nitrone-cyclodextrin and nitroxide-cyclodextrin complexes, the association constants were always higher for the nitroxide complexes than for the nitrone complexes. A cooperative system concerning the complexation of the nitroxide spin adduct with a cyclodextrin was evidenced by EPR titrations. The efficiency of the cyclodextrin inclusion technique to trap superoxide and to resist bioreduction by sodium l-ascorbate was also investigated.

  4. GEO2D - Two-Dimensional Computer Model of a Ground Source Heat Pump System

    DOE Data Explorer

    James Menart

    2013-06-07

    This file contains a zipped file that contains many files required to run GEO2D. GEO2D is a computer code for simulating ground source heat pump (GSHP) systems in two-dimensions. GEO2D performs a detailed finite difference simulation of the heat transfer occurring within the working fluid, the tube wall, the grout, and the ground. Both horizontal and vertical wells can be simulated with this program, but it should be noted that the vertical wall is modeled as a single tube. This program also models the heat pump in conjunction with the heat transfer occurring. GEO2D simulates the heat pump and ground loop as a system. Many results are produced by GEO2D as a function of time and position, such as heat transfer rates, temperatures and heat pump performance. On top of this information from an economic comparison between the geothermal system simulated and a comparable air heat pump systems or a comparable gas, oil or propane heating systems with a vapor compression air conditioner. The version of GEO2D in the attached file has been coupled to the DOE heating and cooling load software called ENERGYPLUS. This is a great convenience for the user because heating and cooling loads are an input to GEO2D. GEO2D is a user friendly program that uses a graphical user interface for inputs and outputs. These make entering data simple and they produce many plotted results that are easy to understand. In order to run GEO2D access to MATLAB is required. If this program is not available on your computer you can download the program MCRInstaller.exe, the 64 bit version, from the MATLAB website or from this geothermal depository. This is a free download which will enable you to run GEO2D..

  5. Critical Dynamics in Quenched 2D Atomic Gases

    NASA Astrophysics Data System (ADS)

    Larcher, F.; Dalfovo, F.; Proukakis, N. P.

    2016-05-01

    Non-equilibrium dynamics across phase transitions is a subject of intense investigations in diverse physical systems. One of the key issues concerns the validity of the Kibble-Zurek (KZ) scaling law for spontaneous defect creation. The KZ mechanism has been recently studied in cold atoms experiments. Interesting open questions arise in the case of 2D systems, due to the distinct nature of the Berezinskii-Kosterlitz-Thouless (BKT) transition. Our studies rely on the stochastic Gross-Pitaevskii equation. We perform systematic numerical simulations of the spontaneous emergence and subsequent dynamics of vortices in a uniform 2D Bose gas, which is quenched across the BKT phase transition in a controlled manner, focusing on dynamical scaling and KZ-type effects. By varying the transverse confinement, we also look at the extent to which such features can be seen in current experiments. Financial support from EPSRC and Provincia Autonoma di Trento.

  6. 2D ice from first principles: structures and phase transitions

    NASA Astrophysics Data System (ADS)

    Chen, Ji; Schusteritsch, Georg; Pickard, Chris J.; Salzmann, Christoph G.; Michaelides, Angelos

    Despite relevance to disparate areas such as cloud microphysics and tribology, major gaps in the understanding of the structures and phase transitions of low-dimensional water ice remain. Here we report a first principles study of confined 2D ice as a function of pressure. We find that at ambient pressure hexagonal and pentagonal monolayer structures are the two lowest enthalpy phases identified. Upon mild compression the pentagonal structure becomes the most stable and persists up to ca. 2 GPa at which point square and rhombic phases are stable. The square phase agrees with recent experimental observations of square ice confined within graphene sheets. We also find a double layer AA stacked square ice phase, which clarifies the difference between experimental observations and earlier force field simulations. This work provides a fresh perspective on 2D confined ice, highlighting the sensitivity of the structures observed to both the confining pressure and width.

  7. Au36(SPh)24 nanomolecules: X-ray crystal structure, optical spectroscopy, electrochemistry, and theoretical analysis.

    PubMed

    Nimmala, Praneeth Reddy; Knoppe, Stefan; Jupally, Vijay Reddy; Delcamp, Jared H; Aikens, Christine M; Dass, Amala

    2014-12-11

    The physicochemical properties of gold:thiolate nanomolecules depend on their crystal structure and the capping ligands. The effects of protecting ligands on the crystal structure of the nanomolecules are of high interest in this area of research. Here we report the crystal structure of an all aromatic thiophenolate-capped Au36(SPh)24 nanomolecule, which has a face-centered cubic (fcc) core similar to other nanomolecules such as Au36(SPh-tBu)24 and Au36(SC5H9)24 with the same number of gold atoms and ligands. The results support the idea that a stable core remains intact even when the capping ligand is varied. We also correct our earlier assignment of "Au36(SPh)23" which was determined based on MALDI mass spectrometry which is more prone to fragmentation than ESI mass spectrometry. We show that ESI mass spectrometry gives the correct assignment of Au36(SPh)24, supporting the X-ray crystal structure. The electronic structure of the title compound was computed at different levels of theory (PBE, LDA, and LB94) using the coordinates extracted from the single crystal X-ray diffraction data. The optical and electrochemical properties were determined from experimental data using UV-vis spectroscopy, cyclic voltammetry, and differential pulse voltammetry. Au36(SPh)24 shows a broad electrochemical gap near 2 V, a desirable optical gap of ∼1.75 eV for dye-sensitized solar cell applications, as well as appropriately positioned electrochemical potentials for many electrocatalytic reactions.

  8. Parallel stitching of 2D materials

    DOE PAGESBeta

    Ling, Xi; Wu, Lijun; Lin, Yuxuan; Ma, Qiong; Wang, Ziqiang; Song, Yi; Yu, Lili; Huang, Shengxi; Fang, Wenjing; Zhang, Xu; et al

    2016-01-27

    Diverse parallel stitched 2D heterostructures, including metal–semiconductor, semiconductor–semiconductor, and insulator–semiconductor, are synthesized directly through selective “sowing” of aromatic molecules as the seeds in the chemical vapor deposition (CVD) method. Lastly, the methodology enables the large-scale fabrication of lateral heterostructures, which offers tremendous potential for its application in integrated circuits.

  9. Parallel Stitching of 2D Materials.

    PubMed

    Ling, Xi; Lin, Yuxuan; Ma, Qiong; Wang, Ziqiang; Song, Yi; Yu, Lili; Huang, Shengxi; Fang, Wenjing; Zhang, Xu; Hsu, Allen L; Bie, Yaqing; Lee, Yi-Hsien; Zhu, Yimei; Wu, Lijun; Li, Ju; Jarillo-Herrero, Pablo; Dresselhaus, Mildred; Palacios, Tomás; Kong, Jing

    2016-03-23

    Diverse parallel stitched 2D heterostructures, including metal-semiconductor, semiconductor-semiconductor, and insulator-semiconductor, are synthesized directly through selective "sowing" of aromatic molecules as the seeds in the chemical vapor deposition (CVD) method. The methodology enables the large-scale fabrication of lateral heterostructures, which offers tremendous potential for its application in integrated circuits.

  10. Application of 2D Non-Graphene Materials and 2D Oxide Nanostructures for Biosensing Technology

    PubMed Central

    Shavanova, Kateryna; Bakakina, Yulia; Burkova, Inna; Shtepliuk, Ivan; Viter, Roman; Ubelis, Arnolds; Beni, Valerio; Starodub, Nickolaj; Yakimova, Rositsa; Khranovskyy, Volodymyr

    2016-01-01

    The discovery of graphene and its unique properties has inspired researchers to try to invent other two-dimensional (2D) materials. After considerable research effort, a distinct “beyond graphene” domain has been established, comprising the library of non-graphene 2D materials. It is significant that some 2D non-graphene materials possess solid advantages over their predecessor, such as having a direct band gap, and therefore are highly promising for a number of applications. These applications are not limited to nano- and opto-electronics, but have a strong potential in biosensing technologies, as one example. However, since most of the 2D non-graphene materials have been newly discovered, most of the research efforts are concentrated on material synthesis and the investigation of the properties of the material. Applications of 2D non-graphene materials are still at the embryonic stage, and the integration of 2D non-graphene materials into devices is scarcely reported. However, in recent years, numerous reports have blossomed about 2D material-based biosensors, evidencing the growing potential of 2D non-graphene materials for biosensing applications. This review highlights the recent progress in research on the potential of using 2D non-graphene materials and similar oxide nanostructures for different types of biosensors (optical and electrochemical). A wide range of biological targets, such as glucose, dopamine, cortisol, DNA, IgG, bisphenol, ascorbic acid, cytochrome and estradiol, has been reported to be successfully detected by biosensors with transducers made of 2D non-graphene materials. PMID:26861346

  11. Application of 2D Non-Graphene Materials and 2D Oxide Nanostructures for Biosensing Technology.

    PubMed

    Shavanova, Kateryna; Bakakina, Yulia; Burkova, Inna; Shtepliuk, Ivan; Viter, Roman; Ubelis, Arnolds; Beni, Valerio; Starodub, Nickolaj; Yakimova, Rositsa; Khranovskyy, Volodymyr

    2016-01-01

    The discovery of graphene and its unique properties has inspired researchers to try to invent other two-dimensional (2D) materials. After considerable research effort, a distinct "beyond graphene" domain has been established, comprising the library of non-graphene 2D materials. It is significant that some 2D non-graphene materials possess solid advantages over their predecessor, such as having a direct band gap, and therefore are highly promising for a number of applications. These applications are not limited to nano- and opto-electronics, but have a strong potential in biosensing technologies, as one example. However, since most of the 2D non-graphene materials have been newly discovered, most of the research efforts are concentrated on material synthesis and the investigation of the properties of the material. Applications of 2D non-graphene materials are still at the embryonic stage, and the integration of 2D non-graphene materials into devices is scarcely reported. However, in recent years, numerous reports have blossomed about 2D material-based biosensors, evidencing the growing potential of 2D non-graphene materials for biosensing applications. This review highlights the recent progress in research on the potential of using 2D non-graphene materials and similar oxide nanostructures for different types of biosensors (optical and electrochemical). A wide range of biological targets, such as glucose, dopamine, cortisol, DNA, IgG, bisphenol, ascorbic acid, cytochrome and estradiol, has been reported to be successfully detected by biosensors with transducers made of 2D non-graphene materials.

  12. Does fluid infiltration affect the motion of sediment grains? - A 3-D numerical modelling approach using SPH

    NASA Astrophysics Data System (ADS)

    Bartzke, Gerhard; Rogers, Benedict D.; Fourtakas, Georgios; Mokos, Athanasios; Huhn, Katrin

    2016-04-01

    The processes that cause the creation of a variety of sediment morphological features, e.g. laminated beds, ripples, or dunes, are based on the initial motion of individual sediment grains. However, with experimental techniques it is difficult to measure the flow characteristics, i.e., the velocity of the pore water flow in sediments, at a sufficient resolution and in a non-intrusive way. As a result, the role of fluid infiltration at the surface and in the interior affecting the initiation of motion of a sediment bed is not yet fully understood. Consequently, there is a strong need for numerical models, since these are capable of quantifying fluid driven sediment transport processes of complex sediment beds composed of irregular shapes. The numerical method Smoothed Particle Hydrodynamics (SPH) satisfies this need. As a meshless and Lagrangian technique, SPH is ideally suited to simulating flows in sediment beds composed of various grain shapes, but also flow around single grains at a high temporal and spatial resolution. The solver chosen is DualSPHysics (www.dual.sphysics.org) since this is validated for a range of flow conditions. For the present investigation a 3-D numerical flume model was generated using SPH with a length of 4.0 cm, a width of 0.05 cm and a height of 0.2 cm where mobile sediment particles were deposited in a recess. An experimental setup was designed to test sediment configurations composed of irregular grain shapes (grain diameter, D50=1000 μm). Each bed consisted of 3500 mobile objects. After the bed generation process, the entire domain was flooded with 18 million fluid particles. To drive the flow, an oscillating motion perpendicular to the bed was applied to the fluid, reaching a peak value of 0.3 cm/s, simulating 4 seconds of real time. The model results showed that flow speeds decreased logarithmically from the top of the domain towards the surface of the beds, indicating a fully developed boundary layer. Analysis of the fluid

  13. 2D numerical modelling of meandering channel formation

    NASA Astrophysics Data System (ADS)

    XIAO, Y.; ZHOU, G.; YANG, F. S.

    2016-03-01

    A 2D depth-averaged model for hydrodynamic sediment transport and river morphological adjustment was established. The sediment transport submodel takes into account the influence of non-uniform sediment with bed surface armoring and considers the impact of secondary flow in the direction of bed-load transport and transverse slope of the river bed. The bank erosion submodel incorporates a simple simulation method for updating bank geometry during either degradational or aggradational bed evolution. Comparison of the results obtained by the extended model with experimental and field data, and numerical predictions validate that the proposed model can simulate grain sorting in river bends and duplicate the characteristics of meandering river and its development. The results illustrate that by using its control factors, the improved numerical model can be applied to simulate channel evolution under different scenarios and improve understanding of patterning processes.

  14. Explicit 2-D Hydrodynamic FEM Program

    1996-08-07

    DYNA2D* is a vectorized, explicit, two-dimensional, axisymmetric and plane strain finite element program for analyzing the large deformation dynamic and hydrodynamic response of inelastic solids. DYNA2D* contains 13 material models and 9 equations of state (EOS) to cover a wide range of material behavior. The material models implemented in all machine versions are: elastic, orthotropic elastic, kinematic/isotropic elastic plasticity, thermoelastoplastic, soil and crushable foam, linear viscoelastic, rubber, high explosive burn, isotropic elastic-plastic, temperature-dependent elastic-plastic. Themore » isotropic and temperature-dependent elastic-plastic models determine only the deviatoric stresses. Pressure is determined by one of 9 equations of state including linear polynomial, JWL high explosive, Sack Tuesday high explosive, Gruneisen, ratio of polynomials, linear polynomial with energy deposition, ignition and growth of reaction in HE, tabulated compaction, and tabulated.« less

  15. Explicit 2-D Hydrodynamic FEM Program

    SciTech Connect

    Lin, Jerry

    1996-08-07

    DYNA2D* is a vectorized, explicit, two-dimensional, axisymmetric and plane strain finite element program for analyzing the large deformation dynamic and hydrodynamic response of inelastic solids. DYNA2D* contains 13 material models and 9 equations of state (EOS) to cover a wide range of material behavior. The material models implemented in all machine versions are: elastic, orthotropic elastic, kinematic/isotropic elastic plasticity, thermoelastoplastic, soil and crushable foam, linear viscoelastic, rubber, high explosive burn, isotropic elastic-plastic, temperature-dependent elastic-plastic. The isotropic and temperature-dependent elastic-plastic models determine only the deviatoric stresses. Pressure is determined by one of 9 equations of state including linear polynomial, JWL high explosive, Sack Tuesday high explosive, Gruneisen, ratio of polynomials, linear polynomial with energy deposition, ignition and growth of reaction in HE, tabulated compaction, and tabulated.

  16. Compact 2-D graphical representation of DNA

    NASA Astrophysics Data System (ADS)

    Randić, Milan; Vračko, Marjan; Zupan, Jure; Novič, Marjana

    2003-05-01

    We present a novel 2-D graphical representation for DNA sequences which has an important advantage over the existing graphical representations of DNA in being very compact. It is based on: (1) use of binary labels for the four nucleic acid bases, and (2) use of the 'worm' curve as template on which binary codes are placed. The approach is illustrated on DNA sequences of the first exon of human β-globin and gorilla β-globin.

  17. 2D materials: Graphene and others

    NASA Astrophysics Data System (ADS)

    Bansal, Suneev Anil; Singh, Amrinder Pal; Kumar, Suresh

    2016-05-01

    Present report reviews the recent advancements in new atomically thick 2D materials. Materials covered in this review are Graphene, Silicene, Germanene, Boron Nitride (BN) and Transition metal chalcogenides (TMC). These materials show extraordinary mechanical, electronic and optical properties which make them suitable candidates for future applications. Apart from unique properties, tune-ability of highly desirable properties of these materials is also an important area to be emphasized on.

  18. Layer Engineering of 2D Semiconductor Junctions.

    PubMed

    He, Yongmin; Sobhani, Ali; Lei, Sidong; Zhang, Zhuhua; Gong, Yongji; Jin, Zehua; Zhou, Wu; Yang, Yingchao; Zhang, Yuan; Wang, Xifan; Yakobson, Boris; Vajtai, Robert; Halas, Naomi J; Li, Bo; Xie, Erqing; Ajayan, Pulickel

    2016-07-01

    A new concept for junction fabrication by connecting multiple regions with varying layer thicknesses, based on the thickness dependence, is demonstrated. This type of junction is only possible in super-thin-layered 2D materials, and exhibits similar characteristics as p-n junctions. Rectification and photovoltaic effects are observed in chemically homogeneous MoSe2 junctions between domains of different thicknesses. PMID:27136275

  19. Engineering light outcoupling in 2D materials.

    PubMed

    Lien, Der-Hsien; Kang, Jeong Seuk; Amani, Matin; Chen, Kevin; Tosun, Mahmut; Wang, Hsin-Ping; Roy, Tania; Eggleston, Michael S; Wu, Ming C; Dubey, Madan; Lee, Si-Chen; He, Jr-Hau; Javey, Ali

    2015-02-11

    When light is incident on 2D transition metal dichalcogenides (TMDCs), it engages in multiple reflections within underlying substrates, producing interferences that lead to enhancement or attenuation of the incoming and outgoing strength of light. Here, we report a simple method to engineer the light outcoupling in semiconducting TMDCs by modulating their dielectric surroundings. We show that by modulating the thicknesses of underlying substrates and capping layers, the interference caused by substrate can significantly enhance the light absorption and emission of WSe2, resulting in a ∼11 times increase in Raman signal and a ∼30 times increase in the photoluminescence (PL) intensity of WSe2. On the basis of the interference model, we also propose a strategy to control the photonic and optoelectronic properties of thin-layer WSe2. This work demonstrates the utilization of outcoupling engineering in 2D materials and offers a new route toward the realization of novel optoelectronic devices, such as 2D LEDs and solar cells.

  20. Modelling RF sources using 2-D PIC codes

    SciTech Connect

    Eppley, K.R.

    1993-03-01

    In recent years, many types of RF sources have been successfully modelled using 2-D PIC codes. Both cross field devices (magnetrons, cross field amplifiers, etc.) and pencil beam d