Science.gov

Sample records for 2d transport code

  1. A velocity-dependent anomalous radial transport model for (2-D, 2-V) kinetic transport codes

    NASA Astrophysics Data System (ADS)

    Bodi, Kowsik; Krasheninnikov, Sergei; Cohen, Ron; Rognlien, Tom

    2008-11-01

    Plasma turbulence constitutes a significant part of radial plasma transport in magnetically confined plasmas. This turbulent transport is modeled in the form of anomalous convection and diffusion coefficients in fluid transport codes. There is a need to model the same in continuum kinetic edge codes [such as the (2-D, 2-V) transport version of TEMPEST, NEO, and the code being developed by the Edge Simulation Laboratory] with non-Maxwellian distributions. We present an anomalous transport model with velocity-dependent convection and diffusion coefficients leading to a diagonal transport matrix similar to that used in contemporary fluid transport models (e.g., UEDGE). Also presented are results of simulations corresponding to radial transport due to long-wavelength ExB turbulence using a velocity-independent diffusion coefficient. A BGK collision model is used to enable comparison with fluid transport codes.

  2. Wall surface temperature calculation in the SolEdge2D-EIRENE transport code

    NASA Astrophysics Data System (ADS)

    Denis, J.; Pégourié, B.; Bucalossi, J.; Bufferand, H.; Ciraolo, G.; Gardarein, J.-L.; Gaspar, J.; Grisolia, C.; Hodille, E.; Missirlian, M.; Serre, E.; Tamain, P.

    2016-02-01

    A thermal wall model is developed for the SolEdge2D-EIRENE edge transport code for calculating the surface temperature of the actively-cooled vessel components in interaction with the plasma. This is a first step towards a self-consistent evaluation of the recycling of particles, which depends on the wall surface temperature. The proposed thermal model is built to match both steady-state temperature and time constant of actively-cooled plasma facing components. A benchmark between this model and the Finite Element Modelling code CAST3M is performed in the case of an ITER-like monoblock. An example of application is presented for a SolEdge2D-EIRENE simulation of a medium-power discharge in the WEST tokamak, showing the steady-state wall temperature distribution and the temperature cycling due to an imposed Edge Localised Mode-like event.

  3. Assessment of the 2D MOC solver in MPACT: Michigan parallel characteristics transport code

    SciTech Connect

    Collins, B.; Kochunas, B.; Downar, T.

    2013-07-01

    MPACT (Michigan Parallel Characteristics Transport Code) is a new reactor analysis tool being developed by researchers at the University of Michigan as an advanced pin-resolved transport capability within VERA (Virtual Environment for Reactor Analysis). VERA is the end-user reactor simulation tool being developed by the Consortium for the Advanced Simulation of Light Water Reactors (CASL). The MPACT development project is itself unique for the way it is changing how students perform research to achieve the instructional and research goals of an academic institution, while providing immediate value to the industry. One of the major computational pieces in MPACT is the 2D MOC solver. It is critical that the 2D MOC solver provide an efficient, accurate, and robust solution over a broad range of reactor operating conditions. The C5G7 benchmark is first used to test the accuracy of the method with a fixed set of cross-sections. The VERA Core Physics Progression Problems are then used to compare the accuracy of both the 2D transport solver and also the cross-section treatments. (authors)

  4. Implementation of 2D domain decomposition in the UCAN gyrokinetic PIC code for non-diffusive transport studies in tokamaks

    NASA Astrophysics Data System (ADS)

    Leboeuf, Jean-Noel; Decyk, Viktor; Newman, David; Sanchez, Raul

    2012-03-01

    The massively parallel, nonlinear, 3D, toroidal, electrostatic, gyrokinetic, PIC, Cartesian geometry UCAN code, with particle ions and adiabatic electrons, has been successfully exercised to identify non-diffusive transport characteristics in DIII-D-like tokamak discharges. The limitation in applying UCAN to larger scale discharges is the 1D domain decomposition in the toroidal (or z-) direction for massively parallel implementation using MPI which has restricted the calculations to a few hundred ion Larmor radii per minor radius. To exceed these sizes, we have implemented 2D domain decomposition in UCAN with the addition of the y-direction to the processor mix. This has been facilitated by use of relevant components in the 2D domain decomposed PLIB2 library of field and particle management routines developed for UCLA's UPIC framework of conventional PIC codes. The gyro-averaging in gyrokinetic codes has necessitated the use of replicated arrays for efficient charge accumulation and particle push. The 2D domain-decomposed UCAN2 code reproduces the original 1D domain results within roundoff. Production calculations at large system sizes have been performed with UCAN2 on 131072 processors of the Cray XE6 at NERSC.

  5. Radioactive Sediment Transport on Ogaki Dam Reservoir in Fukushima Evacuated Zone: Numerical Simulation Studies by 2-D River Simulation Code

    NASA Astrophysics Data System (ADS)

    Yamada, Susumu; Kitamura, Akihiro; Kurikami, Hiroshi; Machida, Masahiko

    2015-04-01

    Fukushima Daiichi Nuclear Power Plant (FDNPP) accident on March 2011 released significant quantities of radionuclides to atmosphere. The most significant nuclide is radioactive cesium isotopes. Therefore, the movement of the cesium is one of the critical issues for the environmental assessment. Since the cesium is strongly sorbed by soil particles, the cesium transport can be regarded as the sediment transport which is mainly brought about by the aquatic system such as a river and a lake. In this research, our target is the sediment transport on Ogaki dam reservoir which is located in about 16 km northwest from FDNPP. The reservoir is one of the principal irrigation dam reservoirs in Fukushima Prefecture and its upstream river basin was heavily contaminated by radioactivity. We simulate the sediment transport on the reservoir using 2-D river simulation code named Nays2D originally developed by Shimizu et al. (The latest version of Nays2D is available as a code included in iRIC (http://i-ric.org/en/), which is a river flow and riverbed variation analysis software package). In general, a 2-D simulation code requires a huge amount of calculation time. Therefore, we parallelize the code and execute it on a parallel computer. We examine the relationship between the behavior of the sediment transport and the height of the reservoir exit. The simulation result shows that almost all the sand that enter into the reservoir deposit close to the entrance of the reservoir for any height of the exit. The amounts of silt depositing within the reservoir slightly increase by raising the height of the exit. However, that of the clay dramatically increases. Especially, more than half of the clay deposits, if the exit is sufficiently high. These results demonstrate that the water level of the reservoir has a strong influence on the amount of the clay discharged from the reservoir. As a result, we conclude that the tuning of the water level has a possibility for controlling the

  6. Modelling of ELM-averaged power exhaust on JET using the EDGE2D code with variable transport coefficients

    NASA Astrophysics Data System (ADS)

    Kirnev, G.; Fundamenski, W.; Corrigan, G.

    2007-06-01

    The scrape-off layer (SOL) of the JET tokamak has been modelled using a two-dimensional plasma/neutral code, EDGE2D/NIMBUS, with variable transport coefficients, chosen according to nine candidate theories for radial heat transport in the SOL. Comparison of the radial power width on the outer divertor plates, λq, predicted by modelling and measured experimentally in L-mode and ELM-averaged H-mode at JET is presented. Transport coefficients based on classical and neo-classical ion conduction are found to offer the best agreement with experimentally measured λq magnitude and scaling with target power, upstream density and toroidal field. These results reinforce the findings of an earlier study, based on a simplified model of the SOL (Chankin 1997 Plasma Phys. Control. Fusion 39 1059), and support the earlier estimate of the power width at the entrance of the outer divertor volume in ITER, λq ap 4 mm mapped to the outer mid-plane (Fundamenski et al 2004 Nucl. Fusion 44 20).

  7. ScintSim1: A new Monte Carlo simulation code for transport of optical photons in 2D arrays of scintillation detectors.

    PubMed

    Mosleh-Shirazi, Mohammad Amin; Zarrini-Monfared, Zinat; Karbasi, Sareh; Zamani, Ali

    2014-01-01

    Two-dimensional (2D) arrays of thick segmented scintillators are of interest as X-ray detectors for both 2D and 3D image-guided radiotherapy (IGRT). Their detection process involves ionizing radiation energy deposition followed by production and transport of optical photons. Only a very limited number of optical Monte Carlo simulation models exist, which has limited the number of modeling studies that have considered both stages of the detection process. We present ScintSim1, an in-house optical Monte Carlo simulation code for 2D arrays of scintillation crystals, developed in the MATLAB programming environment. The code was rewritten and revised based on an existing program for single-element detectors, with the additional capability to model 2D arrays of elements with configurable dimensions, material, etc., The code generates and follows each optical photon history through the detector element (and, in case of cross-talk, the surrounding ones) until it reaches a configurable receptor, or is attenuated. The new model was verified by testing against relevant theoretically known behaviors or quantities and the results of a validated single-element model. For both sets of comparisons, the discrepancies in the calculated quantities were all <1%. The results validate the accuracy of the new code, which is a useful tool in scintillation detector optimization. PMID:24600168

  8. ScintSim1: A new Monte Carlo simulation code for transport of optical photons in 2D arrays of scintillation detectors

    PubMed Central

    Mosleh-Shirazi, Mohammad Amin; Zarrini-Monfared, Zinat; Karbasi, Sareh; Zamani, Ali

    2014-01-01

    Two-dimensional (2D) arrays of thick segmented scintillators are of interest as X-ray detectors for both 2D and 3D image-guided radiotherapy (IGRT). Their detection process involves ionizing radiation energy deposition followed by production and transport of optical photons. Only a very limited number of optical Monte Carlo simulation models exist, which has limited the number of modeling studies that have considered both stages of the detection process. We present ScintSim1, an in-house optical Monte Carlo simulation code for 2D arrays of scintillation crystals, developed in the MATLAB programming environment. The code was rewritten and revised based on an existing program for single-element detectors, with the additional capability to model 2D arrays of elements with configurable dimensions, material, etc., The code generates and follows each optical photon history through the detector element (and, in case of cross-talk, the surrounding ones) until it reaches a configurable receptor, or is attenuated. The new model was verified by testing against relevant theoretically known behaviors or quantities and the results of a validated single-element model. For both sets of comparisons, the discrepancies in the calculated quantities were all <1%. The results validate the accuracy of the new code, which is a useful tool in scintillation detector optimization. PMID:24600168

  9. 2-d Finite Element Code Postprocessor

    1996-07-15

    ORION is an interactive program that serves as a postprocessor for the analysis programs NIKE2D, DYNA2D, TOPAZ2D, and CHEMICAL TOPAZ2D. ORION reads binary plot files generated by the two-dimensional finite element codes currently used by the Methods Development Group at LLNL. Contour and color fringe plots of a large number of quantities may be displayed on meshes consisting of triangular and quadrilateral elements. ORION can compute strain measures, interface pressures along slide lines, reaction forcesmore » along constrained boundaries, and momentum. ORION has been applied to study the response of two-dimensional solids and structures undergoing finite deformations under a wide variety of large deformation transient dynamic and static problems and heat transfer analyses.« less

  10. A Computer Code for 2-D Transport Calculations in x-y Geometry Using the Interface Current Method.

    1990-12-01

    Version 00 RICANT performs 2-dimensional neutron transport calculations in x-y geometry using the interface current method. In the interface current method, the angular neutron currents crossing region surfaces are expanded in terms of the Legendre polynomials in the two half-spaces made by the region surfaces.

  11. MAGNUM-2D computer code: user's guide

    SciTech Connect

    England, R.L.; Kline, N.W.; Ekblad, K.J.; Baca, R.G.

    1985-01-01

    Information relevant to the general use of the MAGNUM-2D computer code is presented. This computer code was developed for the purpose of modeling (i.e., simulating) the thermal and hydraulic conditions in the vicinity of a waste package emplaced in a deep geologic repository. The MAGNUM-2D computer computes (1) the temperature field surrounding the waste package as a function of the heat generation rate of the nuclear waste and thermal properties of the basalt and (2) the hydraulic head distribution and associated groundwater flow fields as a function of the temperature gradients and hydraulic properties of the basalt. MAGNUM-2D is a two-dimensional numerical model for transient or steady-state analysis of coupled heat transfer and groundwater flow in a fractured porous medium. The governing equations consist of a set of coupled, quasi-linear partial differential equations that are solved using a Galerkin finite-element technique. A Newton-Raphson algorithm is embedded in the Galerkin functional to formulate the problem in terms of the incremental changes in the dependent variables. Both triangular and quadrilateral finite elements are used to represent the continuum portions of the spatial domain. Line elements may be used to represent discrete conduits. 18 refs., 4 figs., 1 tab.

  12. Validation and testing of the VAM2D computer code

    SciTech Connect

    Kool, J.B.; Wu, Y.S. )

    1991-10-01

    This document describes two modeling studies conducted by HydroGeoLogic, Inc. for the US NRC under contract no. NRC-04089-090, entitled, Validation and Testing of the VAM2D Computer Code.'' VAM2D is a two-dimensional, variably saturated flow and transport code, with applications for performance assessment of nuclear waste disposal. The computer code itself is documented in a separate NUREG document (NUREG/CR-5352, 1989). The studies presented in this report involve application of the VAM2D code to two diverse subsurface modeling problems. The first one involves modeling of infiltration and redistribution of water and solutes in an initially dry, heterogeneous field soil. This application involves detailed modeling over a relatively short, 9-month time period. The second problem pertains to the application of VAM2D to the modeling of a waste disposal facility in a fractured clay, over much larger space and time scales and with particular emphasis on the applicability and reliability of using equivalent porous medium approach for simulating flow and transport in fractured geologic media. Reflecting the separate and distinct nature of the two problems studied, this report is organized in two separate parts. 61 refs., 31 figs., 9 tabs.

  13. Ion Transport in 2-D Graphene Nanochannels

    NASA Astrophysics Data System (ADS)

    Xie, Quan; Foo, Elbert; Duan, Chuanhua

    2015-11-01

    Graphene membranes have recently attracted wide attention due to its great potential in water desalination and selective molecular sieving. Further developments of these membranes, including enhancing their mass transport rate and/or molecular selectivity, rely on the understanding of fundamental transport mechanisms through graphene membranes, which has not been studied experimentally before due to fabrication and measurement difficulties. Herein we report the fabrication of the basic constituent of graphene membranes, i.e. 2-D single graphene nanochannels (GNCs) and the study of ion transport in these channels. A modified bonding technique was developed to form GNCs with well-defined geometry and uniform channel height. Ion transport in such GNCs was studied using DC conductance measurement. Our preliminary results showed that the ion transport in GNCs is still governed by surface charge at low concentrations (10-6M to 10-4M). However, GNCs exhibits much higher ionic conductances than silica nanochannels with the same geometries in the surface-charge-governed regime. This conductance enhancement can be attributed to the pre-accumulation of charges on graphene surfaces. The work is supported by the Faculty Startup Fund (Boston University, USA).

  14. In search of a 2-dB coding gain

    NASA Technical Reports Server (NTRS)

    Yuen, J. H.; Vo, Q. D.

    1985-01-01

    A recent code search found a (15,1/5), a (14,1/6), and a (15,1/6) convolutional code which, when concatenated with a 10-bit (1023,959) Reed-Solomon (RS) code, achieves a bit-error rate (BER) of 0.000001 at a bit signal-to-noise ratio (SNR) of 0.50 dB, 0.47 dB and 0.42 B, respectively. All of these three codes outperform the Voyager communication system, our baseline, which achieves a BER of 10.000001 at bit SNR of 2.53 db, by more than 2 dB. The 2 dB coding improvement goal was exceeded.

  15. BOXER: Fine-flux Cross Section Condensation, 2D Few Group Diffusion and Transport Burnup Calculations

    2010-02-01

    Neutron transport, calculation of multiplication factor and neutron fluxes in 2-D configurations: cell calculations, 2-D diffusion and transport, and burnup. Preparation of a cross section library for the code BOXER from a basic library in ENDF/B format (ETOBOX).

  16. Recent update of the RPLUS2D/3D codes

    NASA Technical Reports Server (NTRS)

    Tsai, Y.-L. Peter

    1991-01-01

    The development of the RPLUS2D/3D codes is summarized. These codes utilize LU algorithms to solve chemical non-equilibrium flows in a body-fitted coordinate system. The motivation behind the development of these codes is the need to numerically predict chemical non-equilibrium flows for the National AeroSpace Plane Program. Recent improvements include vectorization method, blocking algorithms for geometric flexibility, out-of-core storage for large-size problems, and an LU-SW/UP combination for CPU-time efficiency and solution quality.

  17. AnisWave2D: User's Guide to the 2d Anisotropic Finite-DifferenceCode

    SciTech Connect

    Toomey, Aoife

    2005-01-06

    This document describes a parallel finite-difference code for modeling wave propagation in 2D, fully anisotropic materials. The code utilizes a mesh refinement scheme to improve computational efficiency. Mesh refinement allows the grid spacing to be tailored to the velocity model, so that fine grid spacing can be used in low velocity zones where the seismic wavelength is short, and coarse grid spacing can be used in zones with higher material velocities. Over-sampling of the seismic wavefield in high velocity zones is therefore avoided. The code has been implemented to run in parallel over multiple processors and allows large-scale models and models with large velocity contrasts to be simulated with ease.

  18. ELLIPT2D: A Flexible Finite Element Code Written Python

    SciTech Connect

    Pletzer, A.; Mollis, J.C.

    2001-03-22

    The use of the Python scripting language for scientific applications and in particular to solve partial differential equations is explored. It is shown that Python's rich data structure and object-oriented features can be exploited to write programs that are not only significantly more concise than their counter parts written in Fortran, C or C++, but are also numerically efficient. To illustrate this, a two-dimensional finite element code (ELLIPT2D) has been written. ELLIPT2D provides a flexible and easy-to-use framework for solving a large class of second-order elliptic problems. The program allows for structured or unstructured meshes. All functions defining the elliptic operator are user supplied and so are the boundary conditions, which can be of Dirichlet, Neumann or Robbins type. ELLIPT2D makes extensive use of dictionaries (hash tables) as a way to represent sparse matrices.Other key features of the Python language that have been widely used include: operator over loading, error handling, array slicing, and the Tkinter module for building graphical use interfaces. As an example of the utility of ELLIPT2D, a nonlinear solution of the Grad-Shafranov equation is computed using a Newton iterative scheme. A second application focuses on a solution of the toroidal Laplace equation coupled to a magnetohydrodynamic stability code, a problem arising in the context of magnetic fusion research.

  19. CBEAM. 2-D: a two-dimensional beam field code

    SciTech Connect

    Dreyer, K.A.

    1985-05-01

    CBEAM.2-D is a two-dimensional solution of Maxwell's equations for the case of an electron beam propagating through an air medium. Solutions are performed in the beam-retarded time frame. Conductivity is calculated self-consistently with field equations, allowing sophisticated dependence of plasma parameters to be handled. A unique feature of the code is that it is implemented on an IBM PC microcomputer in the BASIC language. Consequently, it should be available to a wide audience.

  20. 2D FEM Heat Transfer & E&M Field Code

    1992-04-02

    TOPAZ and TOPAZ2D are two-dimensional implicit finite element computer codes for heat transfer analysis. TOPAZ2D can also be used to solve electrostatic and magnetostatic problems. The programs solve for the steady-state or transient temperature or electrostatic and magnetostatic potential field on two-dimensional planar or axisymmetric geometries. Material properties may be temperature or potential-dependent and either isotropic or orthotropic. A variety of time and temperature-dependent boundary conditions can be specified including temperature, flux, convection, and radiation.more » By implementing the user subroutine feature, users can model chemical reaction kinetics and allow for any type of functional representation of boundary conditions and internal heat generation. The programs can solve problems of diffuse and specular band radiation in an enclosure coupled with conduction in the material surrounding the enclosure. Additional features include thermal contact resistance across an interface, bulk fluids, phase change, and energy balances.« less

  1. 2D FEM Heat Transfer & E&M Field Code

    SciTech Connect

    1992-04-02

    TOPAZ and TOPAZ2D are two-dimensional implicit finite element computer codes for heat transfer analysis. TOPAZ2D can also be used to solve electrostatic and magnetostatic problems. The programs solve for the steady-state or transient temperature or electrostatic and magnetostatic potential field on two-dimensional planar or axisymmetric geometries. Material properties may be temperature or potential-dependent and either isotropic or orthotropic. A variety of time and temperature-dependent boundary conditions can be specified including temperature, flux, convection, and radiation. By implementing the user subroutine feature, users can model chemical reaction kinetics and allow for any type of functional representation of boundary conditions and internal heat generation. The programs can solve problems of diffuse and specular band radiation in an enclosure coupled with conduction in the material surrounding the enclosure. Additional features include thermal contact resistance across an interface, bulk fluids, phase change, and energy balances.

  2. Modelling RF sources using 2-D PIC codes

    SciTech Connect

    Eppley, K.R.

    1993-03-01

    In recent years, many types of RF sources have been successfully modelled using 2-D PIC codes. Both cross field devices (magnetrons, cross field amplifiers, etc.) and pencil beam devices (klystrons, gyrotrons, TWT`S, lasertrons, etc.) have been simulated. All these devices involve the interaction of an electron beam with an RF circuit. For many applications, the RF structure may be approximated by an equivalent circuit, which appears in the simulation as a boundary condition on the electric field (``port approximation``). The drive term for the circuit is calculated from the energy transfer between beam and field in the drift space. For some applications it may be necessary to model the actual geometry of the structure, although this is more expensive. One problem not entirely solved is how to accurately model in 2-D the coupling to an external waveguide. Frequently this is approximated by a radial transmission line, but this sometimes yields incorrect results. We also discuss issues in modelling the cathode and injecting the beam into the PIC simulation.

  3. Modelling RF sources using 2-D PIC codes

    SciTech Connect

    Eppley, K.R.

    1993-03-01

    In recent years, many types of RF sources have been successfully modelled using 2-D PIC codes. Both cross field devices (magnetrons, cross field amplifiers, etc.) and pencil beam devices (klystrons, gyrotrons, TWT'S, lasertrons, etc.) have been simulated. All these devices involve the interaction of an electron beam with an RF circuit. For many applications, the RF structure may be approximated by an equivalent circuit, which appears in the simulation as a boundary condition on the electric field ( port approximation''). The drive term for the circuit is calculated from the energy transfer between beam and field in the drift space. For some applications it may be necessary to model the actual geometry of the structure, although this is more expensive. One problem not entirely solved is how to accurately model in 2-D the coupling to an external waveguide. Frequently this is approximated by a radial transmission line, but this sometimes yields incorrect results. We also discuss issues in modelling the cathode and injecting the beam into the PIC simulation.

  4. FAA Smoke Transport Code

    SciTech Connect

    Domino, Stefan; Luketa-Hanlin, Anay; Gallegos, Carlos

    2006-10-27

    FAA Smoke Transport Code, a physics-based Computational Fluid Dynamics tool, which couples heat, mass, and momentum transfer, has been developed to provide information on smoke transport in cargo compartments with various geometries and flight conditions. The software package contains a graphical user interface for specification of geometry and boundary conditions, analysis module for solving the governing equations, and a post-processing tool. The current code was produced by making substantial improvements and additions to a code obtained from a university. The original code was able to compute steady, uniform, isothermal turbulent pressurization. In addition, a preprocessor and postprocessor were added to arrive at the current software package.

  5. 50 CFR Table 2d to Part 679 - Species Codes-Non-FMP Species

    Code of Federal Regulations, 2012 CFR

    2012-10-01

    ... 50 Wildlife and Fisheries 13 2012-10-01 2012-10-01 false Species Codes-Non-FMP Species 2d Table 2d to Part 679 Wildlife and Fisheries FISHERY CONSERVATION AND MANAGEMENT, NATIONAL OCEANIC AND ATMOSPHERIC ADMINISTRATION, DEPARTMENT OF COMMERCE (CONTINUED) FISHERIES OF THE EXCLUSIVE ECONOMIC ZONE OFF ALASKA Pt. 679, Table 2d Table 2d to Part...

  6. 50 CFR Table 2d to Part 679 - Species Codes-Non-FMP Species

    Code of Federal Regulations, 2013 CFR

    2013-10-01

    ... 50 Wildlife and Fisheries 13 2013-10-01 2013-10-01 false Species Codes-Non-FMP Species 2d Table 2d to Part 679 Wildlife and Fisheries FISHERY CONSERVATION AND MANAGEMENT, NATIONAL OCEANIC AND... ALASKA Pt. 679, Table 2d Table 2d to Part 679—Species Codes—Non-FMP Species General use...

  7. 50 CFR Table 2d to Part 679 - Species Codes-Non-FMP Species

    Code of Federal Regulations, 2014 CFR

    2014-10-01

    ... 50 Wildlife and Fisheries 13 2014-10-01 2014-10-01 false Species Codes-Non-FMP Species 2d Table 2d to Part 679 Wildlife and Fisheries FISHERY CONSERVATION AND MANAGEMENT, NATIONAL OCEANIC AND... ALASKA Pt. 679, Table 2d Table 2d to Part 679—Species Codes—Non-FMP Species General use...

  8. 2-D skin-current toroidal-MHD-equilibrium code

    SciTech Connect

    Feinberg, B.; Niland, R.A.; Coonrod, J.; Levine, M.A.

    1982-09-01

    A two-dimensional, toroidal, ideal MHD skin-current equilibrium computer code is described. The code is suitable for interactive implementation on a minicomptuer. Some examples of the use of the code for design and interpretation of toroidal cusp experiments are presented.

  9. FAA Smoke Transport Code

    2006-10-27

    FAA Smoke Transport Code, a physics-based Computational Fluid Dynamics tool, which couples heat, mass, and momentum transfer, has been developed to provide information on smoke transport in cargo compartments with various geometries and flight conditions. The software package contains a graphical user interface for specification of geometry and boundary conditions, analysis module for solving the governing equations, and a post-processing tool. The current code was produced by making substantial improvements and additions to a codemore » obtained from a university. The original code was able to compute steady, uniform, isothermal turbulent pressurization. In addition, a preprocessor and postprocessor were added to arrive at the current software package.« less

  10. Transport Experiments on 2D Correlated Electron Physics in Semiconductors

    SciTech Connect

    Tsui, Daniel

    2014-03-24

    This research project was designed to investigate experimentally the transport properties of the 2D electrons in Si and GaAs, two prototype semiconductors, in several new physical regimes that were previously inaccessible to experiments. The research focused on the strongly correlated electron physics in the dilute density limit, where the electron potential energy to kinetic energy ratio rs>>1, and on the fractional quantum Hall effect related physics in nuclear demagnetization refrigerator temperature range on samples with new levels of purity and controlled random disorder.

  11. A New 2D-Transport, 1D-Diffusion Approximation of the Boltzmann Transport equation

    SciTech Connect

    Larsen, Edward

    2013-06-17

    The work performed in this project consisted of the derivation, implementation, and testing of a new, computationally advantageous approximation to the 3D Boltz- mann transport equation. The solution of the Boltzmann equation is the neutron flux in nuclear reactor cores and shields, but solving this equation is difficult and costly. The new “2D/1D” approximation takes advantage of a special geometric feature of typical 3D reactors to approximate the neutron transport physics in a specific (ax- ial) direction, but not in the other two (radial) directions. The resulting equation is much less expensive to solve computationally, and its solutions are expected to be sufficiently accurate for many practical problems. In this project we formulated the new equation, discretized it using standard methods, developed a stable itera- tion scheme for solving the equation, implemented the new numerical scheme in the MPACT code, and tested the method on several realistic problems. All the hoped- for features of this new approximation were seen. For large, difficult problems, the resulting 2D/1D solution is highly accurate, and is calculated about 100 times faster than a 3D discrete ordinates simulation.

  12. Numerical Simulation of Supersonic Compression Corners and Hypersonic Inlet Flows Using the RPLUS2D Code

    NASA Technical Reports Server (NTRS)

    Kapoor, Kamlesh; Anderson, Bernhard H.; Shaw, Robert J.

    1994-01-01

    A two-dimensional computational code, PRLUS2D, which was developed for the reactive propulsive flows of ramjets and scramjets, was validated for two-dimensional shock-wave/turbulent-boundary-layer interactions. The problem of compression corners at supersonic speeds was solved using the RPLUS2D code. To validate the RPLUS2D code for hypersonic speeds, it was applied to a realistic hypersonic inlet geometry. Both the Baldwin-Lomax and the Chien two-equation turbulence models were used. Computational results showed that the RPLUS2D code compared very well with experimentally obtained data for supersonic compression corner flows, except in the case of large separated flows resulting from the interactions between the shock wave and turbulent boundary layer. The computational results compared well with the experiment results in a hypersonic NASA P8 inlet case, with the Chien two-equation turbulence model performing better than the Baldwin-Lomax model.

  13. TOPAZ2D heat transfer code users manual and thermal property data base

    NASA Astrophysics Data System (ADS)

    Shapiro, A. B.; Edwards, A. L.

    1990-05-01

    TOPAZ2D is a two dimensional implicit finite element computer code for heat transfer analysis. This user's manual provides information on the structure of a TOPAZ2D input file. Also included is a material thermal property data base. This manual is supplemented with The TOPAZ2D Theoretical Manual and the TOPAZ2D Verification Manual. TOPAZ2D has been implemented on the CRAY, SUN, and VAX computers. TOPAZ2D can be used to solve for the steady state or transient temperature field on two dimensional planar or axisymmetric geometries. Material properties may be temperature dependent and either isotropic or orthotropic. A variety of time and temperature dependent boundary conditions can be specified including temperature, flux, convection, and radiation. Time or temperature dependent internal heat generation can be defined locally be element or globally by material. TOPAZ2D can solve problems of diffuse and specular band radiation in an enclosure coupled with conduction in material surrounding the enclosure. Additional features include thermally controlled reactive chemical mixtures, thermal contact resistance across an interface, bulk fluid flow, phase change, and energy balances. Thermal stresses can be calculated using the solid mechanics code NIKE2D which reads the temperature state data calculated by TOPAZ2D. A three dimensional version of the code, TOPAZ3D is available.

  14. 2D Quantum Transport Modeling in Nanoscale MOSFETs

    NASA Technical Reports Server (NTRS)

    Svizhenko, Alexei; Anantram, M. P.; Govindan, T. R.; Biegel, Bryan

    2001-01-01

    With the onset of quantum confinement in the inversion layer in nanoscale MOSFETs, behavior of the resonant level inevitably determines all device characteristics. While most classical device simulators take quantization into account in some simplified manner, the important details of electrostatics are missing. Our work addresses this shortcoming and provides: (a) a framework to quantitatively explore device physics issues such as the source-drain and gate leakage currents, DIBL, and threshold voltage shift due to quantization, and b) a means of benchmarking quantum corrections to semiclassical models (such as density- gradient and quantum-corrected MEDICI). We have developed physical approximations and computer code capable of realistically simulating 2-D nanoscale transistors, using the non-equilibrium Green's function (NEGF) method. This is the most accurate full quantum model yet applied to 2-D device simulation. Open boundary conditions, oxide tunneling and phase-breaking scattering are treated on equal footing. Electrons in the ellipsoids of the conduction band are treated within the anisotropic effective mass approximation. Quantum simulations are focused on MIT 25, 50 and 90 nm "well- tempered" MOSFETs and compared to classical and quantum corrected models. The important feature of quantum model is smaller slope of Id-Vg curve and consequently higher threshold voltage. These results are quantitatively consistent with I D Schroedinger-Poisson calculations. The effect of gate length on gate-oxide leakage and sub-threshold current has been studied. The shorter gate length device has an order of magnitude smaller current at zero gate bias than the longer gate length device without a significant trade-off in on-current. This should be a device design consideration.

  15. Automatic differentiation of the TACO2D finite element code using ADIFOR

    SciTech Connect

    Carle, A.; Fagan, M.

    1996-04-01

    The need for sensitivities in particular applications is becoming increasingly important in problems such as optimal design or control. In this study, the authors use ADIFOR to generate derivative code for TACO2D, a finite element heat transfer code. The study of TACO2D indicates that ADIFOR-generated derivatives yield accurate derivatives at a fraction of the time requirements of finite difference approximations, and space requirements proportional to the number of variables. The primary focus on TACO2D was for the design of chemical vapor deposition reactors.

  16. TOPAZ2D heat transfer code users manual and thermal property data base

    SciTech Connect

    Shapiro, A.B.; Edwards, A.L.

    1990-05-01

    TOPAZ2D is a two dimensional implicit finite element computer code for heat transfer analysis. This user's manual provides information on the structure of a TOPAZ2D input file. Also included is a material thermal property data base. This manual is supplemented with The TOPAZ2D Theoretical Manual and the TOPAZ2D Verification Manual. TOPAZ2D has been implemented on the CRAY, SUN, and VAX computers. TOPAZ2D can be used to solve for the steady state or transient temperature field on two dimensional planar or axisymmetric geometries. Material properties may be temperature dependent and either isotropic or orthotropic. A variety of time and temperature dependent boundary conditions can be specified including temperature, flux, convection, and radiation. Time or temperature dependent internal heat generation can be defined locally be element or globally by material. TOPAZ2D can solve problems of diffuse and specular band radiation in an enclosure coupled with conduction in material surrounding the enclosure. Additional features include thermally controlled reactive chemical mixtures, thermal contact resistance across an interface, bulk fluid flow, phase change, and energy balances. Thermal stresses can be calculated using the solid mechanics code NIKE2D which reads the temperature state data calculated by TOPAZ2D. A three dimensional version of the code, TOPAZ3D is available. The material thermal property data base, Chapter 4, included in this manual was originally published in 1969 by Art Edwards for use with his TRUMP finite difference heat transfer code. The format of the data has been altered to be compatible with TOPAZ2D. Bob Bailey is responsible for adding the high explosive thermal property data.

  17. PiCode: A New Picture-Embedding 2D Barcode.

    PubMed

    Chen, Changsheng; Huang, Wenjian; Zhou, Baojian; Liu, Chenchen; Mow, Wai Ho

    2016-08-01

    Nowadays, 2D barcodes have been widely used as an interface to connect potential customers and advertisement contents. However, the appearance of a conventional 2D barcode pattern is often too obtrusive for integrating into an aesthetically designed advertisement. Besides, no human readable information is provided before the barcode is successfully decoded. This paper proposes a new picture-embedding 2D barcode, called PiCode, which mitigates these two limitations by equipping a scannable 2D barcode with a picturesque appearance. PiCode is designed with careful considerations on both the perceptual quality of the embedded image and the decoding robustness of the encoded message. Comparisons with the existing beautified 2D barcodes show that PiCode achieves one of the best perceptual qualities for the embedded image, and maintains a better tradeoff between image quality and decoding robustness in various application conditions. PiCode has been implemented in the MATLAB on a PC and some key building blocks have also been ported to Android and iOS platforms. Its practicality for real-world applications has been successfully demonstrated. PMID:27249833

  18. 2D MIMO Network Coding with Inter-Route Interference Cancellation

    NASA Astrophysics Data System (ADS)

    Tran, Gia Khanh; Sakaguchi, Kei; Ono, Fumie; Araki, Kiyomichi

    Infrastructure wireless mesh network has been attracting much attention due to the wide range of its application such as public wireless access, sensor network, etc. In recent years, researchers have shown that significant network throughput gain can be achieved by employing network coding in a wireless environment. For further improvement of network throughput in one dimensional (1D) topology, Ono et al. proposed to use multiple antenna technique combined with network coding. In this paper, being inspired by MIMO network coding in 1D topology, the authors establish a novel MIMO network coding algorithm for a 2D topology consisting of two crossing routes. In this algorithm, multiple network coded flows are spatially multiplexed. Owing to the efficient usage of radio resource of network coding and co-channel interference cancellation ability of MIMO, the proposed algorithm shows an 8-fold gain in network capacity compared to conventional methods in the best-case scenario.

  19. Icarus: A 2-D Direct Simulation Monte Carlo (DSMC) Code for Multi-Processor Computers

    SciTech Connect

    BARTEL, TIMOTHY J.; PLIMPTON, STEVEN J.; GALLIS, MICHAIL A.

    2001-10-01

    Icarus is a 2D Direct Simulation Monte Carlo (DSMC) code which has been optimized for the parallel computing environment. The code is based on the DSMC method of Bird[11.1] and models from free-molecular to continuum flowfields in either cartesian (x, y) or axisymmetric (z, r) coordinates. Computational particles, representing a given number of molecules or atoms, are tracked as they have collisions with other particles or surfaces. Multiple species, internal energy modes (rotation and vibration), chemistry, and ion transport are modeled. A new trace species methodology for collisions and chemistry is used to obtain statistics for small species concentrations. Gas phase chemistry is modeled using steric factors derived from Arrhenius reaction rates or in a manner similar to continuum modeling. Surface chemistry is modeled with surface reaction probabilities; an optional site density, energy dependent, coverage model is included. Electrons are modeled by either a local charge neutrality assumption or as discrete simulational particles. Ion chemistry is modeled with electron impact chemistry rates and charge exchange reactions. Coulomb collision cross-sections are used instead of Variable Hard Sphere values for ion-ion interactions. The electro-static fields can either be: externally input, a Langmuir-Tonks model or from a Green's Function (Boundary Element) based Poison Solver. Icarus has been used for subsonic to hypersonic, chemically reacting, and plasma flows. The Icarus software package includes the grid generation, parallel processor decomposition, post-processing, and restart software. The commercial graphics package, Tecplot, is used for graphics display. All of the software packages are written in standard Fortran.

  20. Snapshot 2D tomography via coded aperture x-ray scatter imaging

    PubMed Central

    MacCabe, Kenneth P.; Holmgren, Andrew D.; Tornai, Martin P.; Brady, David J.

    2015-01-01

    This paper describes a fan beam coded aperture x-ray scatter imaging system which acquires a tomographic image from each snapshot. This technique exploits cylindrical symmetry of the scattering cross section to avoid the scanning motion typically required by projection tomography. We use a coded aperture with a harmonic dependence to determine range, and a shift code to determine cross-range. Here we use a forward-scatter configuration to image 2D objects and use serial exposures to acquire tomographic video of motion within a plane. Our reconstruction algorithm also estimates the angular dependence of the scattered radiance, a step toward materials imaging and identification. PMID:23842254

  1. Field depth extension of 2D barcode scanner based on wavefront coding and projection algorithm

    NASA Astrophysics Data System (ADS)

    Zhao, Tingyu; Ye, Zi; Zhang, Wenzi; Huang, Weiwei; Yu, Feihong

    2008-03-01

    Wavefront coding (WFC) used in 2D barcode scanners can extend the depth of field into a great extent with simpler structure compared to the autofocus microscope system. With a cubic phase mask (CPM) employed in the STOP, blurred images will be obtained in charge coupled device (CCD), which can be restored by digital filters. Direct methods are used widely in real-time restoration with good computational efficiency but with details smoothed. Here, the results of direct method are firstly filtered by hard-threshold function. The positions of the steps can be detected by simple differential operators. With the positions corrected by projection algorithm, the exact barcode information is restored. A wavefront coding system with 7mm effective focal length and 6 F-number is designed as an example. Although with the different magnification, images of different object distances can be restored by one point spread function (PSF) with 200mm object distance. A QR code (Quickly Response Code) of 31mm X 27mm is used as a target object. The simulation results showed that the sharp imaging objective distance is from 80mm to 355mm. The 2D barcode scanner with wavefront coding extends field depth with simple structure, low cost and large manufacture tolerance. This combination of the direct filter and projection algorithm proposed here could get the exact 2D barcode information with good computational efficiency.

  2. MULTI2D - a computer code for two-dimensional radiation hydrodynamics

    NASA Astrophysics Data System (ADS)

    Ramis, R.; Meyer-ter-Vehn, J.; Ramírez, J.

    2009-06-01

    Simulation of radiation hydrodynamics in two spatial dimensions is developed, having in mind, in particular, target design for indirectly driven inertial confinement energy (IFE) and the interpretation of related experiments. Intense radiation pulses by laser or particle beams heat high-Z target configurations of different geometries and lead to a regime which is optically thick in some regions and optically thin in others. A diffusion description is inadequate in this situation. A new numerical code has been developed which describes hydrodynamics in two spatial dimensions (cylindrical R-Z geometry) and radiation transport along rays in three dimensions with the 4 π solid angle discretized in direction. Matter moves on a non-structured mesh composed of trilateral and quadrilateral elements. Radiation flux of a given direction enters on two (one) sides of a triangle and leaves on the opposite side(s) in proportion to the viewing angles depending on the geometry. This scheme allows to propagate sharply edged beams without ray tracing, though at the price of some lateral diffusion. The algorithm treats correctly both the optically thin and optically thick regimes. A symmetric semi-implicit (SSI) method is used to guarantee numerical stability. Program summaryProgram title: MULTI2D Catalogue identifier: AECV_v1_0 Program summary URL:http://cpc.cs.qub.ac.uk/summaries/AECV_v1_0.html Program obtainable from: CPC Program Library, Queen's University, Belfast, N. Ireland Licensing provisions: Standard CPC licence, http://cpc.cs.qub.ac.uk/licence/licence.html No. of lines in distributed program, including test data, etc.: 151 098 No. of bytes in distributed program, including test data, etc.: 889 622 Distribution format: tar.gz Programming language: C Computer: PC (32 bits architecture) Operating system: Linux/Unix RAM: 2 Mbytes Word size: 32 bits Classification: 19.7 External routines: X-window standard library (libX11.so) and corresponding heading files (X11/*.h) are

  3. ZEUS-2D: A radiation magnetohydrodynamics code for astrophysical flows in two space dimensions. I - The hydrodynamic algorithms and tests.

    NASA Astrophysics Data System (ADS)

    Stone, James M.; Norman, Michael L.

    1992-06-01

    A detailed description of ZEUS-2D, a numerical code for the simulation of fluid dynamical flows including a self-consistent treatment of the effects of magnetic fields and radiation transfer is presented. Attention is given to the hydrodynamic (HD) algorithms which form the foundation for the more complex MHD and radiation HD algorithms. The effect of self-gravity on the flow dynamics is accounted for by an iterative solution of the sparse-banded matrix resulting from discretizing the Poisson equation in multidimensions. The results of an extensive series of HD test problems are presented. A detailed description of the MHD algorithms in ZEUS-2D is presented. A new method of computing the electromotive force is developed using the method of characteristics (MOC). It is demonstrated through the results of an extensive series of MHD test problems that the resulting hybrid MOC-constrained transport method provides for the accurate evolution of all modes of MHD wave families.

  4. Active transport and cluster formation on 2D networks.

    PubMed

    Greulich, P; Santen, L

    2010-06-01

    We introduce a model for active transport on inhomogeneous networks embedded in a diffusive environment which is motivated by vesicular transport on actin filaments. In the presence of a hard-core interaction, particle clusters are observed that exhibit an algebraically decaying distribution in a large parameter regime, indicating the existence of clusters on all scales. The scale-free behavior can be understood by a mechanism promoting preferential attachment of particles to large clusters. The results are compared with a diffusion-limited aggregation model and active transport on a regular network. For both models we observe aggregation of particles to clusters which are characterized by a finite size scale if the relevant time scales and particle densities are considered. PMID:20556462

  5. CAS2D- NONROTATING BLADE-TO-BLADE, STEADY, POTENTIAL TRANSONIC CASCADE FLOW ANALYSIS CODE

    NASA Technical Reports Server (NTRS)

    Dulikravich, D. S.

    1994-01-01

    An exact, full-potential-equation model for the steady, irrotational, homoentropic, and homoenergetic flow of a compressible, inviscid fluid through a two-dimensional planar cascade together with its appropriate boundary conditions has been derived. The CAS2D computer program numerically solves an artificially time-dependent form of the actual full-potential-equation, providing a nonrotating blade-to-blade, steady, potential transonic cascade flow analysis code. Comparisons of results with test data and theoretical solutions indicate very good agreement. In CAS2D, the governing equation is discretized by using type-dependent, rotated finite differencing and the finite area technique. The flow field is discretized by providing a boundary-fitted, nonuniform computational mesh. This mesh is generated by using a sequence of conformal mapping, nonorthogonal coordinate stretching, and local, isoparametric, bilinear mapping functions. The discretized form of the full-potential equation is solved iteratively by using successive line over relaxation. Possible isentropic shocks are captured by the explicit addition of an artificial viscosity in a conservative form. In addition, a four-level, consecutive, mesh refinement feature makes CAS2D a reliable and fast algorithm for the analysis of transonic, two-dimensional cascade flows. The results from CAS2D are not directly applicable to three-dimensional, potential, rotating flows through a cascade of blades because CAS2D does not consider the effects of the Coriolis force that would be present in the three-dimensional case. This program is written in FORTRAN IV for batch execution and has been implemented on an IBM 370 series computer with a central memory requirement of approximately 200K of 8 bit bytes. The CAS2D program was developed in 1980.

  6. Coding in 2D: Using Intentional Dispersity to Enhance the Information Capacity of Sequence-Coded Polymer Barcodes.

    PubMed

    Laure, Chloé; Karamessini, Denise; Milenkovic, Olgica; Charles, Laurence; Lutz, Jean-François

    2016-08-26

    A 2D approach was studied for the design of polymer-based molecular barcodes. Uniform oligo(alkoxyamine amide)s, containing a monomer-coded binary message, were synthesized by orthogonal solid-phase chemistry. Sets of oligomers with different chain-lengths were prepared. The physical mixture of these uniform oligomers leads to an intentional dispersity (1st dimension fingerprint), which is measured by electrospray mass spectrometry. Furthermore, the monomer sequence of each component of the mass distribution can be analyzed by tandem mass spectrometry (2nd dimension sequencing). By summing the sequence information of all components, a binary message can be read. A 4-bytes extended ASCII-coded message was written on a set of six uniform oligomers. Alternatively, a 3-bytes sequence was written on a set of five oligomers. In both cases, the coded binary information was recovered. PMID:27484303

  7. Hall-Effect Thruster Simulations with 2-D Electron Transport and Hydrodynamic Ions

    NASA Technical Reports Server (NTRS)

    Mikellides, Ioannis G.; Katz, Ira; Hofer, Richard H.; Goebel, Dan M.

    2009-01-01

    A computational approach that has been used extensively in the last two decades for Hall thruster simulations is to solve a diffusion equation and energy conservation law for the electrons in a direction that is perpendicular to the magnetic field, and use discrete-particle methods for the heavy species. This "hybrid" approach has allowed for the capture of bulk plasma phenomena inside these thrusters within reasonable computational times. Regions of the thruster with complex magnetic field arrangements (such as those near eroded walls and magnets) and/or reduced Hall parameter (such as those near the anode and the cathode plume) challenge the validity of the quasi-one-dimensional assumption for the electrons. This paper reports on the development of a computer code that solves numerically the 2-D axisymmetric vector form of Ohm's law, with no assumptions regarding the rate of electron transport in the parallel and perpendicular directions. The numerical challenges related to the large disparity of the transport coefficients in the two directions are met by solving the equations in a computational mesh that is aligned with the magnetic field. The fully-2D approach allows for a large physical domain that extends more than five times the thruster channel length in the axial direction, and encompasses the cathode boundary. Ions are treated as an isothermal, cold (relative to the electrons) fluid, accounting for charge-exchange and multiple-ionization collisions in the momentum equations. A first series of simulations of two Hall thrusters, namely the BPT-4000 and a 6-kW laboratory thruster, quantifies the significance of ion diffusion in the anode region and the importance of the extended physical domain on studies related to the impact of the transport coefficients on the electron flow field.

  8. Screening and transport in 2D semiconductor systems at low temperatures

    PubMed Central

    Das Sarma, S.; Hwang, E. H.

    2015-01-01

    Low temperature carrier transport properties in 2D semiconductor systems can be theoretically well-understood within RPA-Boltzmann theory as being limited by scattering from screened Coulomb disorder arising from random quenched charged impurities in the environment. In this work, we derive a number of analytical formula, supported by realistic numerical calculations, for the relevant density, mobility, and temperature range where 2D transport should manifest strong intrinsic (i.e., arising purely from electronic effects) metallic temperature dependence in different semiconductor materials arising entirely from the 2D screening properties, thus providing an explanation for why the strong temperature dependence of the 2D resistivity can only be observed in high-quality and low-disorder 2D samples and also why some high-quality 2D materials manifest much weaker metallicity than other materials. We also discuss effects of interaction and disorder on the 2D screening properties in this context as well as compare 2D and 3D screening functions to comment why such a strong intrinsic temperature dependence arising from screening cannot occur in 3D metallic carrier transport. Experimentally verifiable predictions are made about the quantitative magnitude of the maximum possible low-temperature metallicity in 2D systems and the scaling behavior of the temperature scale controlling the quantum to classical crossover. PMID:26572738

  9. Multipacting Simulation Study for 56 MHz Quarter Wave Resonator using 2D Code

    SciTech Connect

    Naik,D.; Ben-Zvi, I.

    2009-01-02

    A beam excited 56 MHz Radio Frequency (RF) Niobium Quarter Wave Resonator (QWR) has been proposed to enhance RHIC beam luminosity and bunching. Being a RF cavity, multipacting is expected; therefore an extensive study was carried out with the Multipac 2.1 2D simulation code. The study revealed that multipacting occurs in various bands up to peak surface electric field 50 kV/m and is concentrated mostly above the beam gap and on the outer conductor. To suppress multipacting, a ripple structure was introduced to the outer conductor and the phenomenon was successfully eliminated from the cavity.

  10. Automated design of coupled RF cavities using 2-D and 3-D codes

    SciTech Connect

    Smith, Peter; Christiansen, D. W.; Greninger, P. T.; Spalek, G.

    2001-01-01

    Coupled RF cavities in the Accelerator Production of Tritium Project have been designed using a procedure in which a 2-D code (CCT) searches for a design that meets frequency and coupling requirements, while a 3-D code (HFSS) is used to obtain empirical factors used by CCT to characterize the coupling slot between cavities. Using assumed values of the empirical factors, CCT runs the Superfish code iteratively to solve for a trial cavity design that has a specified frequency and coupling. The frequency shifts and the coupling constant k of the slot are modeled in CCT using a perturbation theory, the results of which are adjusted using the empirical factors. Given a trial design, HFSS is run using periodic boundary conditions to obtain a mode spectrum. The mode spectrum is processed using the DISPER code to obtain values of the coupling and the frequencies with slots. These results are used to calculate a new set of empirical factors, which are fed back into CCT for another design iteration. Cold models have been fabricated and tested to validate the codes, and results will be presented.

  11. A sequential partly iterative approach for multicomponent reactive transport with CORE2D

    SciTech Connect

    Samper, J.; Xu, T.; Yang, C.

    2008-11-01

    CORE{sup 2D} V4 is a finite element code for modeling partly or fully saturated water flow, heat transport and multicomponent reactive solute transport under both local chemical equilibrium and kinetic conditions. It can handle coupled microbial processes and geochemical reactions such as acid-base, aqueous complexation, redox, mineral dissolution/precipitation, gas dissolution/exsolution, ion exchange, sorption via linear and nonlinear isotherms, sorption via surface complexation. Hydraulic parameters may change due to mineral precipitation/dissolution reactions. Coupled transport and chemical equations are solved by using sequential iterative approaches. A sequential partly-iterative approach (SPIA) is presented which improves the accuracy of the traditional sequential noniterative approach (SNIA) and is more efficient than the general sequential iterative approach (SIA). While SNIA leads to a substantial saving of computing time, it introduces numerical errors which are especially large for cation exchange reactions. SPIA improves the efficiency of SIA because the iteration between transport and chemical equations is only performed in nodes with a large mass transfer between solid and liquid phases. The efficiency and accuracy of SPIA are compared to those of SIA and SNIA using synthetic examples and a case study of reactive transport through the Llobregat Delta aquitard in Spain. SPIA is found to be as accurate as SIA while requiring significantly less CPU time. In addition, SPIA is much more accurate than SNIA with only a minor increase in computing time. A further enhancement of the efficiency of SPIA is achieved by improving the efficiency of the Newton-Raphson method used for solving chemical equations. Such an improvement is obtained by working with increments of log-concentrations and ignoring the terms of the Jacobian matrix containing derivatives of activity coefficients. A proof is given for the symmetry and non-singularity of the Jacobian matrix

  12. ZEUS-2D: A Radiation Magnetohydrodynamics Code for Astrophysical Flows in Two Space Dimensions. II. The Magnetohydrodynamic Algorithms and Tests

    NASA Astrophysics Data System (ADS)

    Stone, James M.; Norman, Michael L.

    1992-06-01

    In this, the second of a series of three papers, we continue a detailed description of ZEUS-2D, a numerical code for the simulation of fluid dynamical flows in astrophysics including a self-consistent treatment of the effects of magnetic fields and radiation transfer. In this paper, we give a detailed description of the magnetohydrodynamical (MHD) algorithms in ZEUS-2D. The recently developed constrained transport (CT) algorithm is implemented for the numerical evolution of the components of the magnetic field for MHD simulations. This formalism guarantees the numerically evolved field components will satisfy the divergence-free constraint at all times. We find, however, that the method used to compute the electromotive forces must be chosen carefully to propagate accurately all modes of MHD wave families (in particular shear Alfvén waves). A new method of computing the electromotive force is developed using the method of characteristics (MOC). It is demonstrated through the results of an extensive series of MHD test problems that the resulting hybrid MOC-CT method provides for the accurate evolution of all modes of MHD wave families.

  13. Modelling 2001 lahars at Popocatépetl volcano using FLO2D numerical code

    NASA Astrophysics Data System (ADS)

    Caballero, L.; Capra, L.

    2013-12-01

    Popocatépetl volcano is located on the central part of the Transmexican Volcanic Belt. It is one of the most active volcanoes in Mexico and endanger more than 25 million people that lives in its surroundings. In the last months, the renewal of its volcanic activity put into alert scientific community. One of the possible scenarios is the 2001 explosive activity, which was characterized by a 8 km eruptive column and the subsequent formation of pumice flows up to 4 km from the crater. Lahars were generated few hours after, remobilizing the new deposits towards NE flank of the volcano, along Huiloac Gorge, almost reaching Santiago Xalitzintla town (Capra et al., 2004). The occurrence of a similar scenario makes very important to reproduce this event to delimitate accurately lahar hazard zones. In this work, 2001 lahar deposit is modeled using FLO2D numerical code. Geophone data is used to reconstruct initial hydrograph and sediment concentration. Sensitivity study of most important parameters used by this code like Manning, and α and β coefficients was conducted in order to achieve a good simulation. Results obtained were compared with field data and demonstrated a good agreement in thickness and flow distribution. A comparison with previously published data with laharZ program (Muñoz-Salinas, 2009) is also made. Additionally, lahars with fluctuating sediment concentrations but with similar volume are simulated to observe the influence of the rheological behavior on lahar distribution.

  14. Embedded morphological dilation coding for 2D and 3D images

    NASA Astrophysics Data System (ADS)

    Lazzaroni, Fabio; Signoroni, Alberto; Leonardi, Riccardo

    2002-01-01

    Current wavelet-based image coders obtain high performance thanks to the identification and the exploitation of the statistical properties of natural images in the transformed domain. Zerotree-based algorithms, as Embedded Zerotree Wavelets (EZW) and Set Partitioning In Hierarchical Trees (SPIHT), offer high Rate-Distortion (RD) coding performance and low computational complexity by exploiting statistical dependencies among insignificant coefficients on hierarchical subband structures. Another possible approach tries to predict the clusters of significant coefficients by means of some form of morphological dilation. An example of a morphology-based coder is the Significance-Linked Connected Component Analysis (SLCCA) that has shown performance which are comparable to the zerotree-based coders but is not embedded. A new embedded bit-plane coder is proposed here based on morphological dilation of significant coefficients and context based arithmetic coding. The algorithm is able to exploit both intra-band and inter-band statistical dependencies among wavelet significant coefficients. Moreover, the same approach is used both for two and three-dimensional wavelet-based image compression. Finally we the algorithms are tested on some 2D images and on a medical volume, by comparing the RD results to those obtained with the state-of-the-art wavelet-based coders.

  15. Parallel algorithms for 2-D cylindrical transport equations of Eigenvalue problem

    SciTech Connect

    Wei, J.; Yang, S.

    2013-07-01

    In this paper, aimed at the neutron transport equations of eigenvalue problem under 2-D cylindrical geometry on unstructured grid, the discrete scheme of Sn discrete ordinate and discontinuous finite is built, and the parallel computation for the scheme is realized on MPI systems. Numerical experiments indicate that the designed parallel algorithm can reach perfect speedup, it has good practicality and scalability. (authors)

  16. Acceleration of a Monte Carlo radiation transport code

    SciTech Connect

    Hochstedler, R.D.; Smith, L.M.

    1996-03-01

    Execution time for the Integrated TIGER Series (ITS) Monte Carlo radiation transport code has been reduced by careful re-coding of computationally intensive subroutines. Three test cases for the TIGER (1-D slab geometry), CYLTRAN (2-D cylindrical geometry), and ACCEPT (3-D arbitrary geometry) codes were identified and used to benchmark and profile program execution. Based upon these results, sixteen top time-consuming subroutines were examined and nine of them modified to accelerate computations with equivalent numerical output to the original. The results obtained via this study indicate that speedup factors of 1.90 for the TIGER code, 1.67 for the CYLTRAN code, and 1.11 for the ACCEPT code are achievable. {copyright} {ital 1996 American Institute of Physics.}

  17. Differential Sensitivity Theory applied to the MESA2D code for multi-material problems

    SciTech Connect

    Henninger, R.J.; Maudlin, P.J.; Harstad, E.N.

    1996-05-01

    The technique called Differential Sensitivity Theory (DST) is extended to the multi-component system of equations solved by the MESA2D hydrocode. DST uses adjoint techniques to determine exact sensitivity derivatives, i.e., if R is a calculation result of interest (response R) and {alpha}{sub i} is a calculation input (parameter {alpha}{sub i}), then {partial_derivative}R/{partial_derivative}{alpha}{sub i} is defined as the sensitivity. The advantage of using DST is that for an n-parameter problem {ital all} n sensitivities can be obtained by integrating the solutions from only {ital two} calculations, a MESA calculation and its corresponding adjoint calculation using an Adjoint Continuum Mechanics (ACM) code. Previous papers have described application of the technique to one-dimensional, single-material problems. This work presents the derivation and solution of the additional adjoint equations for the purpose of computing sensitivities for two-dimensional, multi-component problems. As an example, results for a multi-material flyer plate impact problem featuring an oblique impact are given. {copyright} {ital 1996 American Institute of Physics.}

  18. Differential Sensitivity Theory applied to the MESA2D code for multi-material problems

    NASA Astrophysics Data System (ADS)

    Henninger, R. J.; Maudlin, P. J.; Harstad, E. N.

    1996-05-01

    The technique called Differential Sensitivity Theory (DST) is extended to the multi-component system of equations solved by the MESA2D hydrocode. DST uses adjoint techniques to determine exact sensitivity derivatives, i.e., if R is a calculation result of interest (response R) and αi is a calculation input (parameter αi), then ∂R/∂αi is defined as the sensitivity. The advantage of using DST is that for an n-parameter problem all n sensitivities can be obtained by integrating the solutions from only two calculations, a MESA calculation and its corresponding adjoint calculation using an Adjoint Continuum Mechanics (ACM) code. Previous papers have described application of the technique to one-dimensional, single-material problems. This work presents the derivation and solution of the additional adjoint equations for the purpose of computing sensitivities for two-dimensional, multi-component problems. As an example, results for a multi-material flyer plate impact problem featuring an oblique impact are given.

  19. Differential sensitivity theory applied to the MESA2D code for multi-material problems

    SciTech Connect

    Henninger, R.J.; Maudlin, P.J.; Harstad, E.N.

    1995-09-01

    The technique called Differential Sensitivity Theory (DST) is extended to the multi-component system of equations solved by the MESA2D hydrocode. DST uses adjoint techniques to determine exact sensitivity derivatives, i.e., if R is a calculation result of interest (response R) and {alpha}{sub i} is a calculation input (parameter {alpha}{sub i}), then {partial_derivative}R/{partial_derivative}{alpha}{sub i} is defined as the sensitivity. The advantage of using DST is that for an n-parameter problem all n sensitivities can be obtained by integrating the solutions from only two calculations, a MESA calculation and its corresponding adjoint calculation using an Adjoint Continuum Mechanics (ACM) code. Previous papers have described application of the technique to one-dimensional, single-material problems. This work presents the derivation and solution of the additional adjoint equations for the purpose of computing sensitivities for two-dimensional, multi-component problems. As an example, results for a multi-material flyer plate impact problem featuring an oblique impact are given.

  20. A 2D/1D coupling neutron transport method based on the matrix MOC and NEM methods

    SciTech Connect

    Zhang, H.; Zheng, Y.; Wu, H.; Cao, L.

    2013-07-01

    A new 2D/1D coupling method based on the matrix MOC method (MMOC) and nodal expansion method (NEM) is proposed for solving the three-dimensional heterogeneous neutron transport problem. The MMOC method, used for radial two-dimensional calculation, constructs a response matrix between source and flux with only one sweep and then solves the linear system by using the restarted GMRES algorithm instead of the traditional trajectory sweeping process during within-group iteration for angular flux update. Long characteristics are generated by using the customization of commercial software AutoCAD. A one-dimensional diffusion calculation is carried out in the axial direction by employing the NEM method. The 2D and ID solutions are coupled through the transverse leakage items. The 3D CMFD method is used to ensure the global neutron balance and adjust the different convergence properties of the radial and axial solvers. A computational code is developed based on these theories. Two benchmarks are calculated to verify the coupling method and the code. It is observed that the corresponding numerical results agree well with references, which indicates that the new method is capable of solving the 3D heterogeneous neutron transport problem directly. (authors)

  1. A novel 2D wavelength-time chaos code in optical CDMA system

    NASA Astrophysics Data System (ADS)

    Zhang, Qi; Xin, Xiangjun; Wang, Yongjun; Zhang, Lijia; Yu, Chongxiu; Meng, Nan; Wang, Houtian

    2012-11-01

    Two-dimensional wavelength-time chaos code is proposed and constructed for a synchronous optical code division multiple access system. The access performance is compared between one-dimensional chaos code, WDM/chaos code and the proposed code. Comparison shows that two-dimensional wavelength-time chaos code possesses larger capacity, better spectral efficiency and bit-error ratio than WDM/chaos combinations and one-dimensional chaos code.

  2. Effects of magnetic impurities on transport in 2D topological insulators

    NASA Astrophysics Data System (ADS)

    Dang, Xiaoqian; Burton, J. D.; Tsymbal, Evgeny

    Understanding the transport properties of topological insulators could bring such materials from fundamental research to potential applications. Here we report on the theoretical investigations of the effects of magnetic impurities on transport properties of model two-dimensional (2D) topological insulators (TIs). We utilize the tight-binding form of the Bernevig-Hughes-Zhang model and investigate the transport properties by employing the Landauer-Büttiker formalism. We explore the current distribution in 2D TIs resulting from scattering by a magnetic impurity which breaks time-reversal symmetry. We find that a magnetic impurity could drive anti-resonant behavior of the conductance, as revealed from full backscattering of the electron current flowing at one of the edges of the TI. This phenomenon occurs due to spin-flip scattering when the Fermi energy matches the impurity state and the magnetic moment of the impurity is aligned along the TI edge. Additionally, we explore the effect of an external magnetic gate attached to the system and show that changing the magnetization orientation within the gate allows the control of conductance. This geometric setup could be realized experimentally providing the opportunity to tune transport properties of 2D TIs by a magnetic gate.

  3. 2D/1D approximations to the 3D neutron transport equation. I: Theory

    SciTech Connect

    Kelley, B. W.; Larsen, E. W.

    2013-07-01

    A new class of '2D/1D' approximations is proposed for the 3D linear Boltzmann equation. These approximate equations preserve the exact transport physics in the radial directions x and y and diffusion physics in the axial direction z. Thus, the 2D/1D equations are more accurate approximations of the 3D Boltzmann equation than the conventional 3D diffusion equation. The 2D/1D equations can be systematically discretized, to yield accurate simulation methods for 3D reactor core problems. The resulting solutions will be more accurate than 3D diffusion solutions, and less expensive to generate than standard 3D transport solutions. In this paper, we (i) show that the simplest 2D/1D equation has certain desirable properties, (ii) systematically discretize this equation, and (iii) derive a stable iteration scheme for solving the discrete system of equations. In a companion paper [1], we give numerical results that confirm the theoretical predictions of accuracy and iterative stability. (authors)

  4. Process to generate a synthetic diagnostic for microwave imaging reflectometry with the full-wave code FWR2D.

    PubMed

    Ren, X; Domier, C W; Kramer, G; Luhmann, N C; Muscatello, C M; Shi, L; Tobias, B J; Valeo, E

    2014-11-01

    A synthetic microwave imaging reflectometer (MIR) diagnostic employing the full-wave reflectometer code (FWR2D) has been developed and is currently being used to guide the design of real systems, such as the one recently installed on DIII-D. The FWR2D code utilizes real plasma profiles as input, and it is combined with optical simulation tools for synthetic diagnostic signal generation. A detailed discussion of FWR2D and the process to generate the synthetic signal are presented in this paper. The synthetic signal is also compared to a prescribed density fluctuation spectrum to quantify the imaging quality. An example is presented with H-mode-like plasma profiles derived from a DIII-D discharge, where the MIR focal is located in the pedestal region. It is shown that MIR is suitable for diagnosing fluctuations with poloidal wavenumber up to 2.0 cm(-1) and fluctuation amplitudes less than 5%. PMID:25430276

  5. Impact of high speed civil transports on stratospheric ozone: A 2-D model investigation

    SciTech Connect

    Kinnison, D.E.; Connell, P.S.

    1996-12-01

    This study investigates the effect on stratospheric ozone from a fleet of proposed High Speed Civil Transports (HSCTs). The new LLNL 2-D operator-split chemical-radiative-transport model of the troposphere and stratosphere is used for this HSCT investigation. This model is integrated in a diurnal manner, using an implicit numerical solver. Therefore, rate coefficients are not modified by any sort of diurnal average factor. This model also does not make any assumptions on lumping of chemical species into families. Comparisons to previous model-derived HSCT assessment of ozone change are made, both to the previous LLNL 2-D model and to other models from the international assessment modeling community. The sensitivity to the NO{sub x} emission index and sulfate surface area density is also explored.

  6. 2D/1D approximations to the 3D neutron transport equation. II: Numerical comparisons

    SciTech Connect

    Kelley, B. W.; Collins, B.; Larsen, E. W.

    2013-07-01

    In a companion paper [1], (i) several new '2D/1D equations' are introduced as accurate approximations to the 3D Boltzmann transport equation, (ii) the simplest of these approximate equations is systematically discretized, and (iii) a theoretically stable iteration scheme is developed to solve the discrete equations. In this paper, numerical results are presented that confirm the theoretical predictions made in [1]. (authors)

  7. Modeling anomalous radial transport in kinetic transport codes

    NASA Astrophysics Data System (ADS)

    Bodi, K.; Krasheninnikov, S. I.; Cohen, R. H.; Rognlien, T. D.

    2009-11-01

    Anomalous transport is typically the dominant component of the radial transport in magnetically confined plasmas, where the physical origin of this transport is believed to be plasma turbulence. A model is presented for anomalous transport that can be used in continuum kinetic edge codes like TEMPEST, NEO and the next-generation code being developed by the Edge Simulation Laboratory. The model can also be adapted to particle-based codes. It is demonstrated that the model with a velocity-dependent diffusion and convection terms can match a diagonal gradient-driven transport matrix as found in contemporary fluid codes, but can also include off-diagonal effects. The anomalous transport model is also combined with particle drifts and a particle/energy-conserving Krook collision operator to study possible synergistic effects with neoclassical transport. For the latter study, a velocity-independent anomalous diffusion coefficient is used to mimic the effect of long-wavelength ExB turbulence.

  8. In-facility transport code review

    SciTech Connect

    Spore, J.W.; Boyack, B.E.; Bohl, W.R.

    1996-07-01

    The following computer codes were reviewed by the In-Facility Transport Working Group for application to the in-facility transport of radioactive aerosols, flammable gases, and/or toxic gases: (1) CONTAIN, (2) FIRAC, (3) GASFLOW, (4) KBERT, and (5) MELCOR. Based on the review criteria as described in this report and the versions of each code available at the time of the review, MELCOR is the best code for the analysis of in-facility transport when multidimensional effects are not significant. When multi-dimensional effects are significant, GASFLOW should be used.

  9. Development of models for the two-dimensional, two-fluid code for sodium boiling NATOF-2D. [LMFBR

    SciTech Connect

    Zielinski, R.G.; Kazimi, M.S.

    1981-09-01

    Several features were incorporated into NATOF-2D, a two-dimensional, two fluid code developed at MIT for the purpose of analysis of sodium boiling transients under LMFBR conditions. They include improved interfacial mass, momentum and energy exchange rate models, and a cell-to-cell radial heat conduction mechanism which was calibrated by simulation of Westinghouse Blanket Heat Transfer Test Program Runs 544 and 545. Finally, a direct method of pressure field solution was implemented into a direct method of pressure field solution was implemented into NATOF-2D, replacing the iterative technique previously available, and resulted in substantially reduced computational costs.

  10. Monte Carlo Ion Transport Analysis Code.

    2009-04-15

    Version: 00 TRIPOS is a versatile Monte Carlo ion transport analysis code. It has been applied to the treatment of both surface and bulk radiation effects. The media considered is composed of multilayer polyatomic materials.

  11. A 2-D orientation-adaptive prediction filter in lifting structures for image coding.

    PubMed

    Gerek, Omer N; Cetin, A Enis

    2006-01-01

    Lifting-style implementations of wavelets are widely used in image coders. A two-dimensional (2-D) edge adaptive lifting structure, which is similar to Daubechies 5/3 wavelet, is presented. The 2-D prediction filter predicts the value of the next polyphase component according to an edge orientation estimator of the image. Consequently, the prediction domain is allowed to rotate +/-45 degrees in regions with diagonal gradient. The gradient estimator is computationally inexpensive with additional costs of only six subtractions per lifting instruction, and no multiplications are required. PMID:16435541

  12. Monte Carlo Nucleon Meson Transport Code System.

    2000-11-17

    Version 00 NMTC/JAERI97 is an upgraded version of the code system NMTC/JAERI, which was developed in 1982 at JAERI and is based on the CCC-161/NMTC code system. NMTC/JAERI97 simulates high energy nuclear reactions and nucleon-meson transport processes.

  13. Performance analysis of 2D asynchronous hard-limiting optical code-division multiple access system through atmospheric scattering channel

    NASA Astrophysics Data System (ADS)

    Zhao, Yaqin; Zhong, Xin; Wu, Di; Zhang, Ye; Ren, Guanghui; Wu, Zhilu

    2013-09-01

    Optical code-division multiple access (OCDMA) systems usually allocate orthogonal or quasi-orthogonal codes to the active users. When transmitting through atmospheric scattering channel, the coding pulses are broadened and the orthogonality of the codes is worsened. In truly asynchronous case, namely both the chips and the bits are asynchronous among each active user, the pulse broadening affects the system performance a lot. In this paper, we evaluate the performance of a 2D asynchronous hard-limiting wireless OCDMA system through atmospheric scattering channel. The probability density function of multiple access interference in truly asynchronous case is given. The bit error rate decreases as the ratio of the chip period to the root mean square delay spread increases and the channel limits the bit rate to different levels when the chip period varies.

  14. STATUS OF THE MCNPX TRANSPORT CODE

    SciTech Connect

    Hughes, H.G.; Chadwick, M.B.

    2000-10-01

    The Monte Carlo particle transport code MCNPX and its associated data have been the focus of a major development effort at Los Alamos for several years. The system has reached a mature state, and has become a significant tool for many intermediate and high-energy particle transport applications. A recent version has been released to the Radiation Safety Information Computational Center (RSICC). A recent report provides an overview of the code and an extensive set of references for the component physics modules used in the code. In this paper we review the status of the developmental version of MCNPX, and describe some important new enhancements, including the use of evaluated nuclear data files for proton transport; the use of photonuclear reaction data; improved elastic and inelastic react ion cross sections for nucleons, antinucleons, pions, and kaons; and two new modes of operation of the code. We also illustrate the use of the new proton and photonuclear data in two representative applications.

  15. Transport studies in 2D transition metal dichalcogenides and black phosphorus.

    PubMed

    Du, Yuchen; Neal, Adam T; Zhou, Hong; Ye, Peide D

    2016-07-01

    Two-dimensional (2D) materials are a new family of materials with interesting physical properties, ranging from insulating hexagonal boron nitride, semiconducting or semi-metallic transition metal dichalcogenides, to gapless metallic graphene. In this review, we provide a brief discussion of transport studies in transition metal dichalcogenides, including both semiconducting and semi-metallic phases, as well as a discussion of the newly emerged narrow bandgap layered material, black phosphorus, in terms of its electrical and quantum transport properties at room and cryogenic temperatures. Ultra-thin layered channel materials with atomic layer thickness in the cross-plane direction, together with relatively high carrier mobility with appropriate passivation techniques, provide the promise for new scientific discoveries and broad device applications. PMID:27187790

  16. Transport studies in 2D transition metal dichalcogenides and black phosphorus

    NASA Astrophysics Data System (ADS)

    Du, Yuchen; Neal, Adam T.; Zhou, Hong; Ye, Peide D.

    2016-07-01

    Two-dimensional (2D) materials are a new family of materials with interesting physical properties, ranging from insulating hexagonal boron nitride, semiconducting or semi-metallic transition metal dichalcogenides, to gapless metallic graphene. In this review, we provide a brief discussion of transport studies in transition metal dichalcogenides, including both semiconducting and semi-metallic phases, as well as a discussion of the newly emerged narrow bandgap layered material, black phosphorus, in terms of its electrical and quantum transport properties at room and cryogenic temperatures. Ultra-thin layered channel materials with atomic layer thickness in the cross-plane direction, together with relatively high carrier mobility with appropriate passivation techniques, provide the promise for new scientific discoveries and broad device applications.

  17. Implementation of an anomalous radial transport model for continuum kinetic edge codes

    NASA Astrophysics Data System (ADS)

    Bodi, K.; Krasheninnikov, S. I.; Cohen, R. H.; Rognlien, T. D.

    2007-11-01

    Radial plasma transport in magnetic fusion devices is often dominated by plasma turbulence compared to neoclassical collisional transport. Continuum kinetic edge codes [such as the (2d,2v) transport version of TEMPEST and also EGK] compute the collisional transport directly, but there is a need to model the anomalous transport from turbulence for long-time transport simulations. Such a model is presented and results are shown for its implementation in the TEMPEST gyrokinetic edge code. The model includes velocity-dependent convection and diffusion coefficients expressed as a Hermite polynominals in velocity. The specification of the Hermite coefficients can be set, e.g., by specifying the ratio of particle and energy transport as in fluid transport codes. The anomalous transport terms preserve the property of no particle flux into unphysical regions of velocity space. TEMPEST simulations are presented showing the separate control of particle and energy anomalous transport, and comparisons are made with neoclassical transport also included.

  18. Momentum Transport: 2D and 3D Cloud Resolving Model Simulations

    NASA Technical Reports Server (NTRS)

    Tao, Wei-Kuo

    2001-01-01

    The major objective of this study is to investigate the momentum budgets associated with several convective systems that developed during the TOGA COARE IOP (west Pacific warm pool region) and GATE (east Atlantic region). The tool for this study is the improved Goddard Cumulas Ensemble (GCE) model which includes a 3-class ice-phase microphysical scheme, explicit cloud radiative interactive processes and air-sea interactive surface processes. The model domain contains 256 x 256 grid points (with 2 km resolution) in the horizontal and 38 grid points (to a depth of 22 km) in the vertical. The 2D domain has 1024 grid points. The simulations were performed over a 7-day time period (December 19-26, 1992, for TOGA COARE and September 1-7, 1994 for GATE). Cyclic literal boundary conditions are required for this type of long-term integration. Two well organized squall systems (TOGA, COARE February 22, 1993, and GATE September 12, 1994) were also simulated using the 3D GCE model. Only 9 h simulations were required to cover the life time of the squall systems. the lateral boundary conditions were open for these two squall systems simulations. the following will be examined: (1) the momentum budgets in the convective and stratiform regions, (2) the relationship between momentum transport and cloud organization (i.e., well organized squall lines versus less organized convective), (3) the differences and similarities in momentum transport between 2D and 3D simulated convective systems, and (4) the differences and similarities in momentum budgets between cloud systems simulated with open and cyclic lateral boundary conditions. Preliminary results indicate that there are only small differences between 2D and 3D simulated momentum budgets. Major differences occur, however, between momentum budgets associated with squall systems simulated using different lateral boundary conditions.

  19. DANTSYS: A diffusion accelerated neutral particle transport code system

    SciTech Connect

    Alcouffe, R.E.; Baker, R.S.; Brinkley, F.W.; Marr, D.R.; O`Dell, R.D.; Walters, W.F.

    1995-06-01

    The DANTSYS code package includes the following transport codes: ONEDANT, TWODANT, TWODANT/GQ, TWOHEX, and THREEDANT. The DANTSYS code package is a modular computer program package designed to solve the time-independent, multigroup discrete ordinates form of the boltzmann transport equation in several different geometries. The modular construction of the package separates the input processing, the transport equation solving, and the post processing (or edit) functions into distinct code modules: the Input Module, one or more Solver Modules, and the Edit Module, respectively. The Input and Edit Modules are very general in nature and are common to all the Solver Modules. The ONEDANT Solver Module contains a one-dimensional (slab, cylinder, and sphere), time-independent transport equation solver using the standard diamond-differencing method for space/angle discretization. Also included in the package are solver Modules named TWODANT, TWODANT/GQ, THREEDANT, and TWOHEX. The TWODANT Solver Module solves the time-independent two-dimensional transport equation using the diamond-differencing method for space/angle discretization. The authors have also introduced an adaptive weighted diamond differencing (AWDD) method for the spatial and angular discretization into TWODANT as an option. The TWOHEX Solver Module solves the time-independent two-dimensional transport equation on an equilateral triangle spatial mesh. The THREEDANT Solver Module solves the time independent, three-dimensional transport equation for XYZ and RZ{Theta} symmetries using both diamond differencing with set-to-zero fixup and the AWDD method. The TWODANT/GQ Solver Module solves the 2-D transport equation in XY and RZ symmetries using a spatial mesh of arbitrary quadrilaterals. The spatial differencing method is based upon the diamond differencing method with set-to-zero fixup with changes to accommodate the generalized spatial meshing.

  20. Parallel Finite Element Electron-Photon Transport Analysis on 2-D Unstructured Mesh

    SciTech Connect

    Drumm, C.R.

    1999-01-01

    A computer code has been developed to solve the linear Boltzmann transport equation on an unstructured mesh of triangles, from a Pro/E model. An arbitriwy arrangement of distinct material regions is allowed. Energy dependence is handled by solving over an arbitrary number of discrete energy groups. Angular de- pendence is treated by Legendre-polynomial expansion of the particle cross sections and a discrete ordinates treatment of the particle fluence. The resulting linear system is solved in parallel with a preconditioned conjugate-gradients method. The solution method is unique, in that the space-angle dependence is solved si- multaneously, eliminating the need for the usual inner iterations. Electron cross sections are obtained from a Goudsrnit-Saunderson modifed version of the CEPXS code. A one-dimensional version of the code has also been develop@ for testing and development purposes.

  1. Incorporating a Turbulence Transport Model into 2-D Hybrid Hall Thruster Simulations

    NASA Astrophysics Data System (ADS)

    Cha, Eunsun; Cappelli, Mark A.; Fernandez, Eduardo

    2014-10-01

    2-D hybrid simulations of Hall plasma thrusters that do not resolve cross-field transport-generating fluctuations require a model to capture how electrons migrate across the magnetic field. We describe the results of integrating a turbulent electron transport model into simulations of plasma behavior in a plane spanned by the E and B field vectors. The simulations treat the electrons as a fluid and the heavy species (ions/neutrals) as discrete particles. The transport model assumes that the turbulent eddy cascade in the electron fluid to smaller scales is the primary means of electron energy dissipation. Using this model, we compare simulations to experimental measurements made on a laboratory Hall discharge over a range of discharge voltage. Both the current-voltage trends as well as the plasma properties such as plasma temperature, electron density, and ion velocities seem agree favorably with experiments, where a simple Bohm transport model tends to perform poorly in capturing much of the discharge behavior.

  2. Reliability of astrophysical jet simulations in 2D. On inter-code reliability and numerical convergence

    NASA Astrophysics Data System (ADS)

    Krause, M.; Camenzind, M.

    2001-12-01

    In the present paper, we examine the convergence behavior and inter-code reliability of astrophysical jet simulations in axial symmetry. We consider both pure hydrodynamic jets and jets with a dynamically significant magnetic field. The setups were chosen to match the setups of two other publications, and recomputed with the MHD code NIRVANA. We show that NIRVANA and the two other codes give comparable, but not identical results. We explain the differences by the different application of artificial viscosity in the three codes and numerical details, which can be summarized in a resolution effect, in the case without magnetic field: NIRVANA turns out to be a fair code of medium efficiency. It needs approximately twice the resolution as the code by Lind (Lind et al. 1989) and half the resolution as the code by Kössl (Kössl & Müller 1988). We find that some global properties of a hydrodynamical jet simulation, like e.g. the bow shock velocity, converge at 100 points per beam radius (ppb) with NIRVANA. The situation is quite different after switching on the toroidal magnetic field: in this case, global properties converge even at 10 ppb. In both cases, details of the inner jet structure and especially the terminal shock region are still insufficiently resolved, even at our highest resolution of 70 ppb in the magnetized case and 400 ppb for the pure hydrodynamic jet. The magnetized jet even suffers from a fatal retreat of the Mach disk towards the inflow boundary, which indicates that this simulation does not converge, in the end. This is also in definite disagreement with earlier simulations, and challenges further studies of the problem with other codes. In the case of our highest resolution simulation, we can report two new features: first, small scale Kelvin-Helmholtz instabilities are excited at the contact discontinuity next to the jet head. This slows down the development of the long wavelength Kelvin-Helmholtz instability and its turbulent cascade to smaller

  3. Simulation and analysis of solute transport in 2D fracture/pipe networks: The SOLFRAC program

    NASA Astrophysics Data System (ADS)

    Bodin, Jacques; Porel, Gilles; Delay, Fred; Ubertosi, Fabrice; Bernard, Stéphane; de Dreuzy, Jean-Raynald

    2007-01-01

    The Time Domain Random Walk (TDRW) method has been recently developed by Delay and Bodin [Delay, F. and Bodin, J., 2001. Time domain random walk method to simulate transport by advection-dispersion and matrix diffusion in fracture networks. Geophys. Res. Lett., 28(21): 4051-4054.] and Bodin et al. [Bodin, J., Porel, G. and Delay, F., 2003c. Simulation of solute transport in discrete fracture networks using the time domain random walk method. Earth Planet. Sci. Lett., 6566: 1-8.] for simulating solute transport in discrete fracture networks. It is assumed that the fracture network can reasonably be represented by a network of interconnected one-dimensional pipes (i.e. flow channels). Processes accounted for are: (1) advection and hydrodynamic dispersion in the channels, (2) matrix diffusion, (3) diffusion into stagnant zones within the fracture planes, (4) sorption reactions onto the fracture walls and in the matrix, (5) linear decay, and (6) mass sharing at fracture intersections. The TDRW method is handy and very efficient in terms of computation costs since it allows for the one-step calculation of the particle residence time in each bond of the network. This method has been programmed in C++, and efforts have been made to develop an efficient and user-friendly software, called SOLFRAC. This program is freely downloadable at the URL http://labo.univ-poitiers.fr/hydrasa/intranet/telechargement.htm. It calculates solute transport into 2D pipe networks, while considering different types of injections and different concepts of local dispersion within each flow channel. Post-simulation analyses are also available, such as the mean velocity or the macroscopic dispersion at the scale of the entire network. The program may be used to evaluate how a given transport mechanism influences the macroscopic transport behaviour of fracture networks. It may also be used, as is the case, e.g., with analytical solutions, to interpret laboratory or field tracer test experiments

  4. 50 CFR Table 2d to Part 679 - Species Codes-Non-FMP Species

    Code of Federal Regulations, 2011 CFR

    2011-10-01

    ... (unspecified) 625 Lamprey, pacific 600 Lingcod 130 Lumpsucker 216 Pacific flatnose 260 Pacific hagfish 212 Pacific hake 112 Pacific lamprey 600 Pacific saury 220 Pacific tomcod 250 Poacher (Family Algonidae) 219... description Code Arctic char, anadromous 521 Dolly varden, anadromous 531 Eels or eel-like fish 210 Eel,...

  5. TOPAZ - a finite element heat conduction code for analyzing 2-D solids

    SciTech Connect

    Shapiro, A.B.

    1984-03-01

    TOPAZ is a two-dimensional implicit finite element computer code for heat conduction analysis. This report provides a user's manual for TOPAZ and a description of the numerical algorithms used. Sample problems with analytical solutions are presented. TOPAZ has been implemented on the CRAY and VAX computers.

  6. 2D simulation of transport and degradation in the River Rhine.

    PubMed

    Teichmann, L; Reuschenbach, P; Müller, B; Horn, H

    2002-01-01

    A simple 2D model has been developed for the simulation of mass transport and degradation of substances in the river Rhine. The model describes mass transport in the flow direction with a convective and a dispersive term. Transversal transport is described by segmenting the river and formulating a transversal exchange coefficient between the segments. Degradation can be formulated with any kinetics from first order to complex enzyme kinetics. The model was verified with monitoring data from the river Rhine. The hydrodynamic parameters such as dispersion coefficients and exchange coefficients were fitted to the conductivity, which was assumed to be non-degradable. The degradation term was fitted to ammonia values. The model was used to simulate measured concentrations of a readily (Aniline) and a poorly biodegradable substance (1,4-Dioxan) 10 m from the left river bank. It was the objective of this research program to develop a model which allows a realistic estimation of the locally and regionally predicted environmental concentration of chemical substances in the EU risk assessment scheme. PMID:12380980

  7. Coupling 2-D cylindrical and 3-D x-y-z transport computations

    SciTech Connect

    Abu-Shumays, I.K.; Yehnert, C.E.; Pitcairn, T.N.

    1998-06-30

    This paper describes a new two-dimensional (2-D) cylindrical geometry to three-dimensional (3-D) rectangular x-y-z splice option for multi-dimensional discrete ordinates solutions to the neutron (photon) transport equation. Of particular interest are the simple transformations developed and applied in order to carry out the required spatial and angular interpolations. The spatial interpolations are linear and equivalent to those applied elsewhere. The angular interpolations are based on a high order spherical harmonics representation of the angular flux. Advantages of the current angular interpolations over previous work are discussed. An application to an intricate streaming problem is provided to demonstrate the advantages of the new method for efficient and accurate prediction of particle behavior in complex geometries.

  8. 2-D Circulation Control Airfoil Benchmark Experiments Intended for CFD Code Validation

    NASA Technical Reports Server (NTRS)

    Englar, Robert J.; Jones, Gregory S.; Allan, Brian G.; Lin, Johb C.

    2009-01-01

    A current NASA Research Announcement (NRA) project being conducted by Georgia Tech Research Institute (GTRI) personnel and NASA collaborators includes the development of Circulation Control (CC) blown airfoils to improve subsonic aircraft high-lift and cruise performance. The emphasis of this program is the development of CC active flow control concepts for both high-lift augmentation, drag control, and cruise efficiency. A collaboration in this project includes work by NASA research engineers, whereas CFD validation and flow physics experimental research are part of NASA s systematic approach to developing design and optimization tools for CC applications to fixed-wing aircraft. The design space for CESTOL type aircraft is focusing on geometries that depend on advanced flow control technologies that include Circulation Control aerodynamics. The ability to consistently predict advanced aircraft performance requires improvements in design tools to include these advanced concepts. Validation of these tools will be based on experimental methods applied to complex flows that go beyond conventional aircraft modeling techniques. This paper focuses on recent/ongoing benchmark high-lift experiments and CFD efforts intended to provide 2-D CFD validation data sets related to NASA s Cruise Efficient Short Take Off and Landing (CESTOL) study. Both the experimental data and related CFD predictions are discussed.

  9. Efficient simulation of pitch angle collisions in a 2+2-D Eulerian Vlasov code

    NASA Astrophysics Data System (ADS)

    Banks, Jeff; Berger, R.; Brunner, S.; Tran, T.

    2014-10-01

    Here we discuss pitch angle scattering collisions in the context of the Eulerian-based kinetic code LOKI that evolves the Vlasov-Poisson system in 2+2-dimensional phase space. The collision operator is discretized using 4th order accurate conservative finite-differencing. The treatment of the Vlasov operator in phase-space uses an approach based on a minimally diffuse, fourth-order-accurate discretization (Banks and Hittinger, IEEE T. Plasma Sci. 39, 2198). The overall scheme is therefore discretely conservative and controls unphysical oscillations. Some details of the numerical scheme will be presented, and the implementation on modern highly concurrent parallel computers will be discussed. We will present results of collisional effects on linear and non-linear Landau damping of electron plasma waves (EPWs). In addition we will present initial results showing the effect of collisions on the evolution of EPWs in two space dimensions. This work was performed under the auspices of the U.S. Department of Energy by Lawrence Livermore National Laboratory under Contract DE-AC52-07NA27344 and funded by the LDRD program at LLNL under project tracking code 12-ERD-061.

  10. FLUKA: A Multi-Particle Transport Code

    SciTech Connect

    Ferrari, A.; Sala, P.R.; Fasso, A.; Ranft, J.; /Siegen U.

    2005-12-14

    This report describes the 2005 version of the Fluka particle transport code. The first part introduces the basic notions, describes the modular structure of the system, and contains an installation and beginner's guide. The second part complements this initial information with details about the various components of Fluka and how to use them. It concludes with a detailed history and bibliography.

  11. Spin-Orbit Interaction and Related Transport Phenomena in 2d Electron and Hole Systems

    NASA Astrophysics Data System (ADS)

    Khaetskii, A.

    Spin-orbit interaction is responsible for many physical phenomena which are under intensive study currently. Here we discuss several of them. The first phenomenon is the edge spin accumulation, which appears due to spin-orbit interaction in 2D mesoscopic structures in the presence of a charge current. We consider the case of a strong spin-orbit-related splitting of the electron spectrum, i.e. a spin precession length is small compared to the mean free path l. The structure can be either in a ballistic regime (when the mean free path is the largest scale in the problem) or quasi-ballistic regime (when l is much smaller than the sample size). We show how physics of edge spin accumulation in different situations should be understood from the point of view of unitarity of boundary scattering. Using transparent method of scattering states, we are able to explain some previous puzzling theoretical results. We clarify the important role of the form of the spin-orbit Hamiltonian, the role of the boundary conditions, etc., and reveal the wrong results obtained in the field by other researchers. The relation between the edge spin density and the bulk spin current in different regimes is discussed. The detailed comparison with the existing theoretical works is presented. Besides, we consider several new transport phenomena which appear in the presence of spin-orbit interaction, for example, magnetotransport phenomena in an external classical magnetic field. In particular, new mechanism of negative magneto-resistance appears which is due to destruction of spin fluxes by the magnetic field, and which can be really pronounced in 2D systems with strong scatterers.

  12. High Energy Particle Transport Code System.

    2003-12-17

    Version 00 NMTC/JAM is an upgraded version of the code CCC-694/NMTC-JAERI97, which was developed in 1982 at JAERI and is based on the CCC-161/NMTC code system. NMTC/JAM simulates high energy nuclear reactions and nuclear meson transport processes. The applicable energy range of NMTC/JAM was extended in principle up to 200 GeV for nucleons and mesons by introducing the high energy nuclear reaction code Jet-Aa Microscopic (JAM) for the intra-nuclear cascade part. For the evaporation andmore » fission process, a new model, GEM, can be used to describe the light nucleus production from the excited residual nucleus. According to the extension of the applicable energy, the nucleon-nucleus non-elastic, elastic and differential elastic cross section data were upgraded. In addition, the particle transport in a magnetic field was implemented for beam transport calculations. Some new tally functions were added, and the format of input and output of data is more user friendly. These new calculation functions and utilities provide a tool to carry out reliable neutronics study of a large scale target system with complex geometry more accurately and easily than with the previous model. It implements an intranuclear cascade model taking account of the in-medium nuclear effects and the preequilibrium calculation model based on the exciton one. For treating the nucleon transport process, the nucleon-nucleus cross sections are revised to those derived by the systematics of Pearlstein. Moreover, the level density parameter derived by Ignatyuk is included as a new option for particle evaporation calculation. A geometry package based on the Combinatorial Geometry with multi-array system and the importance sampling technique is implemented in the code. Tally function is also employed for obtaining such physical quantities as neutron energy spectra, heat deposition and nuclide yield without editing a history file. The code can simulate both the primary spallation reaction and the

  13. 2D Resistive Magnetohydrodynamics Calculations with an Arbitrary Lagrange Eulerian Code

    NASA Astrophysics Data System (ADS)

    Rousculp, C. L.; Gianakon, T. A.; Lipnikov, K. N.; Nelson, E. M.

    2015-11-01

    Single fluid resistive MHD is useful for modeling Z-pinch configurations in cylindrical geometry. One such example is thin walled liners for shock physics or HEDP experiments driven by capacitor banks such as the LANL's PHELIX or Sandia-Z. MHD is also useful for modeling high-explosive-driven flux compression generators (FCGs) and their high-current switches. The resistive MHD in our arbitrary Lagrange Eulerian (ALE) code operates in one and two dimensions in both Cartesian and cylindrical geometry. It is implemented as a time-step split operator, which consists of, ideal MHD connected to the explicit hydro momentum and energy equations and a second order mimetic discretization solver for implicit solution of the magnetic diffusion equation. In a staggered grid scheme, a single-component of cell-centered magnetic flux is conserved in the Lagrangian frame exactly, while magnetic forces are accumulated at the nodes. Total energy is conserved to round off. Total flux is conserved under the ALE relaxation and remap. The diffusion solver consistently computes Ohmic heating. Both Neumann and Dirichlet boundary conditions are available with coupling to external circuit models. Example calculations will be shown.

  14. A 2D forward and inverse code for streaming potential problems

    NASA Astrophysics Data System (ADS)

    Soueid Ahmed, A.; Jardani, A.; Revil, A.

    2013-12-01

    The self-potential method corresponds to the passive measurement of the electrical field in response to the occurrence of natural sources of current in the ground. One of these sources corresponds to the streaming current associated with the flow of the groundwater. We can therefore apply the self- potential method to recover non-intrusively some information regarding the groundwater flow. We first solve the forward problem starting with the solution of the groundwater flow problem, then computing the source current density, and finally solving a Poisson equation for the electrical potential. We use the finite-element method to solve the relevant partial differential equations. In order to reduce the number of (petrophysical) model parameters required to solve the forward problem, we introduced an effective charge density tensor of the pore water, which can be determined directly from the permeability tensor for neutral pore waters. The second aspect of our work concerns the inversion of the self-potential data using Tikhonov regularization with smoothness and weighting depth constraints. This approach accounts for the distribution of the electrical resistivity, which can be independently and approximately determined from electrical resistivity tomography. A numerical code, SP2DINV, has been implemented in Matlab to perform both the forward and inverse modeling. Three synthetic case studies are discussed.

  15. THE MCNPX MONTE CARLO RADIATION TRANSPORT CODE

    SciTech Connect

    WATERS, LAURIE S.; MCKINNEY, GREGG W.; DURKEE, JOE W.; FENSIN, MICHAEL L.; JAMES, MICHAEL R.; JOHNS, RUSSELL C.; PELOWITZ, DENISE B.

    2007-01-10

    MCNPX (Monte Carlo N-Particle eXtended) is a general-purpose Monte Carlo radiation transport code with three-dimensional geometry and continuous-energy transport of 34 particles and light ions. It contains flexible source and tally options, interactive graphics, and support for both sequential and multi-processing computer platforms. MCNPX is based on MCNP4B, and has been upgraded to most MCNP5 capabilities. MCNP is a highly stable code tracking neutrons, photons and electrons, and using evaluated nuclear data libraries for low-energy interaction probabilities. MCNPX has extended this base to a comprehensive set of particles and light ions, with heavy ion transport in development. Models have been included to calculate interaction probabilities when libraries are not available. Recent additions focus on the time evolution of residual nuclei decay, allowing calculation of transmutation and delayed particle emission. MCNPX is now a code of great dynamic range, and the excellent neutronics capabilities allow new opportunities to simulate devices of interest to experimental particle physics; particularly calorimetry. This paper describes the capabilities of the current MCNPX version 2.6.C, and also discusses ongoing code development.

  16. Influence of Transport on Two-Dimensional Model Simulation. Tracer Sensitivity to 2-D Model Transport. 1; Long Lived Tracers

    NASA Technical Reports Server (NTRS)

    Fleming, Eric L.; Jackman, Charles H.; Considine, David B.; Stolarski, Richard S.

    1999-01-01

    In this study, we examine the sensitivity of long lived tracers to changes in the base transport components in our 2-D model. Changes to the strength of the residual circulation in the upper troposphere and stratosphere and changes to the lower stratospheric K(sub zz) had similar effects in that increasing the transport rates decreased the overall stratospheric mean age, and increased the rate of removal of material from the stratosphere. Increasing the stratospheric K(sub yy) increased the mean age due to the greater recycling of air parcels through the middle atmosphere, via the residual circulation, before returning to the troposphere. However, increasing K(sub yy) along with self-consistent increases in the corresponding planetary wave drive, which leads to a stronger residual circulation, more than compensates for the K(sub yy)-effect, and produces significantly younger ages throughout the stratosphere. Simulations with very small tropical stratospheric K(sub yy) decreased the globally averaged age of air by as much as 25% in the middle and upper stratosphere, and resulted in substantially weaker vertical age gradients above 20 km in the extratropics. We found only very small stratospheric tracer sensitivity to the magnitude of the horizontal mixing across the tropopause, and to the strength of the mesospheric gravity wave drag and diffusion used in the model. We also investigated the transport influence on chemically active tracers and found a strong age-tracer correlation, both in concentration and calculated lifetimes. The base model transport gives the most favorable overall comparison with a variety of inert tracer observations, and provides a significant improvement over our previous 1995 model transport. Moderate changes to the base transport were found to provide modest agreement with some of the measurements. Transport scenarios with residence times ranging from moderately shorter to slightly longer relative to the base case simulated N2O lifetimes

  17. RYLLA. [X-ray transport code

    SciTech Connect

    Hyde, R.A.

    1983-06-08

    This paper describes a computer code, RYLLA, which models the deposition of x-rays into thin metal slabs, and transports the resulting photoelectrons, finding the distribution of electrons leaving the slab from both the front and back surfaces. The slab must be homogeneous, but can contain a mixture of up to 5 different elements. Due to the short electron mean free path at low electron energies, RYLLA should be used only for studying thin slabs, roughly < 100 mg/cm/sup 2/ for low Z metals, and < 10 mg/cm/sup 2/ for high Z metals. X-ray energies should be in the range of 1 to 150 keV, as they are deposited only via photoionization and Compton scattering processes. Following photoionization, a hole exists in the electron cloud of the absorbing atom. This fills either by Auger or fluoresence, resulting in lower energy holes which are also filled. Fluoresence photons are transported and absorbed in the same manner as the primary photons, except that they are isotropically produced. Once all photons have been transported and absorbed, and all holes have been filled, a space- and energy-dependent electron source spectrum has been obtained. This is used in a discrete ordinate expansion solution of the 1-D transport equation, which gives the output electron spectra at the two slab surfaces. This paper discusses both the physics and coding of RYLLA. Examples of user input are given, as are some comparisons with other codes.

  18. Validation and Comparison of 2D and 3D Codes for Nearshore Motion of Long Waves Using Benchmark Problems

    NASA Astrophysics Data System (ADS)

    Velioǧlu, Deniz; Cevdet Yalçıner, Ahmet; Zaytsev, Andrey

    2016-04-01

    Tsunamis are huge waves with long wave periods and wave lengths that can cause great devastation and loss of life when they strike a coast. The interest in experimental and numerical modeling of tsunami propagation and inundation increased considerably after the 2011 Great East Japan earthquake. In this study, two numerical codes, FLOW 3D and NAMI DANCE, that analyze tsunami propagation and inundation patterns are considered. Flow 3D simulates linear and nonlinear propagating surface waves as well as long waves by solving three-dimensional Navier-Stokes (3D-NS) equations. NAMI DANCE uses finite difference computational method to solve 2D depth-averaged linear and nonlinear forms of shallow water equations (NSWE) in long wave problems, specifically tsunamis. In order to validate these two codes and analyze the differences between 3D-NS and 2D depth-averaged NSWE equations, two benchmark problems are applied. One benchmark problem investigates the runup of long waves over a complex 3D beach. The experimental setup is a 1:400 scale model of Monai Valley located on the west coast of Okushiri Island, Japan. Other benchmark problem is discussed in 2015 National Tsunami Hazard Mitigation Program (NTHMP) Annual meeting in Portland, USA. It is a field dataset, recording the Japan 2011 tsunami in Hilo Harbor, Hawaii. The computed water surface elevation and velocity data are compared with the measured data. The comparisons showed that both codes are in fairly good agreement with each other and benchmark data. The differences between 3D-NS and 2D depth-averaged NSWE equations are highlighted. All results are presented with discussions and comparisons. Acknowledgements: Partial support by Japan-Turkey Joint Research Project by JICA on earthquakes and tsunamis in Marmara Region (JICA SATREPS - MarDiM Project), 603839 ASTARTE Project of EU, UDAP-C-12-14 project of AFAD Turkey, 108Y227, 113M556 and 213M534 projects of TUBITAK Turkey, RAPSODI (CONCERT_Dis-021) of CONCERT

  19. Ensemble Solute Transport in 2-D Operator-Stable Random Fields

    NASA Astrophysics Data System (ADS)

    Monnig, N. D.; Benson, D. A.

    2006-12-01

    The heterogeneous velocity field that exists at many scales in an aquifer will typically cause a dissolved solute plume to grow at a rate faster than Fick's Law predicts. Some statistical model must be adopted to account for the aquifer structure that engenders the velocity heterogeneity. A fractional Brownian motion (fBm) model has been shown to create the long-range correlation that can produce continually faster-than-Fickian plume growth. Previous fBm models have assumed isotropic scaling (defined here by a scalar Hurst coefficient). Motivated by field measurements of aquifer hydraulic conductivity, recent techniques were developed to construct random fields with anisotropic scaling with a self-similarity parameter that is defined by a matrix. The growth of ensemble plumes is analyzed for transport through 2-D "operator- stable" fBm hydraulic conductivity (K) fields. Both the longitudinal and transverse Hurst coefficients are important to both plume growth rates and the timing and duration of breakthrough. Smaller Hurst coefficients in the transverse direction lead to more "continuity" or stratification in the direction of transport. The result is continually faster-than-Fickian growth rates, highly non-Gaussian ensemble plumes, and a longer tail early in the breakthrough curve. Contrary to some analytic stochastic theories for monofractal K fields, the plume growth rate never exceeds Mercado's [1967] purely stratified aquifer growth rate of plume apparent dispersivity proportional to mean distance. Apparent super-Mercado growth must be the result of other factors, such as larger plumes corresponding to either a larger initial plume size or greater variance of the ln(K) field.

  20. Validation of comprehensive space radiation transport code

    SciTech Connect

    Shinn, J.L.; Simonsen, L.C.; Cucinotta, F.A.

    1998-12-01

    The HZETRN code has been developed over the past decade to evaluate the local radiation fields within sensitive materials on spacecraft in the space environment. Most of the more important nuclear and atomic processes are now modeled and evaluation within a complex spacecraft geometry with differing material components, including transition effects across boundaries of dissimilar materials, are included. The atomic/nuclear database and transport procedures have received limited validation in laboratory testing with high energy ion beams. The codes have been applied in design of the SAGE-III instrument resulting in material changes to control injurious neutron production, in the study of the Space Shuttle single event upsets, and in validation with space measurements (particle telescopes, tissue equivalent proportional counters, CR-39) on Shuttle and Mir. The present paper reviews the code development and presents recent results in laboratory and space flight validation.

  1. User's manual for DYNA2D: an explicit two-dimensional hydrodynamic finite-element code with interactive rezoning

    SciTech Connect

    Hallquist, J.O.

    1982-02-01

    This revised report provides an updated user's manual for DYNA2D, an explicit two-dimensional axisymmetric and plane strain finite element code for analyzing the large deformation dynamic and hydrodynamic response of inelastic solids. A contact-impact algorithm permits gaps and sliding along material interfaces. By a specialization of this algorithm, such interfaces can be rigidly tied to admit variable zoning without the need of transition regions. Spatial discretization is achieved by the use of 4-node solid elements, and the equations-of motion are integrated by the central difference method. An interactive rezoner eliminates the need to terminate the calculation when the mesh becomes too distorted. Rather, the mesh can be rezoned and the calculation continued. The command structure for the rezoner is described and illustrated by an example.

  2. Impact of Interface Roughness on the Metallic Transport of Strongly Correlated 2D Holes in GaAs Quantum Wells

    NASA Astrophysics Data System (ADS)

    Goble, Nicholas; Watson, John; Manfra, Michael; Gao, Xuan

    2014-03-01

    Understanding the non-monotonic behavior in the temperature dependent resistance, R(T) , of strongly correlated two-dimensional (2D) carriers in clean semiconductors has been a central issue in the studies of 2D metallic states and metal-insulator transitions. We have studied the transport of high mobility 2D holes in 20nm wide GaAs quantum wells with varying interface roughness by changing the Al fraction x in the AlxGa1-xAs barrier. Prior to this work, no comprehensive study of the non-monotonic resistance peak against controlled barrier characteristics has been conducted. We show that the shape of the electronic contribution to R(T) is qualitatively unchanged throughout all of our measurements, regardless of the percentage of Al in the barrier. It is observed that increasing x or short range interface roughness suppresses both the strength and characteristic temperature scale of the 2D metallicity, pointing to the distinct role of short range versus long range disorder in the 2D metallic transport in this 2D hole system with interaction parameter rs ~ 20. N.G. acknowledges the US DOE GAANN fellowship (P200A090276 & P200A070434). M.J.M. is supported by the Miller Family Foundation and the US DOE, Office of Basic Energy Sciences, DMS (DE-SC0006671). X.P.A.G thanks the NSF for funding support (DMR-0906415).

  3. In situ 2D-extraction of DNA wheels by 3D through-solution transport.

    PubMed

    Yonamine, Yusuke; Cervantes-Salguero, Keitel; Nakanishi, Waka; Kawamata, Ibuki; Minami, Kosuke; Komatsu, Hirokazu; Murata, Satoshi; Hill, Jonathan P; Ariga, Katsuhiko

    2015-12-28

    Controlled transfer of DNA nanowheels from a hydrophilic to a hydrophobic surface was achieved by complexation of the nanowheels with a cationic lipid (2C12N(+)). 2D surface-assisted extraction, '2D-extraction', enabled structure-persistent transfer of DNA wheels, which could not be achieved by simple drop-casting. PMID:26583486

  4. 3D Multigroup Sn Neutron Transport Code

    2001-02-14

    ATTILA is a 3D multigroup transport code with arbitrary order ansotropic scatter. The transport equation is solved in first order form using a tri-linear discontinuous spatial differencing on an arbitrary tetrahedral mesh. The overall solution technique is source iteration with DSA acceleration of the scattering source. Anisotropic boundary and internal sources may be entered in the form of spherical harmonics moments. Alpha and k eigenvalue problems are allowed, as well as fixed source problems. Forwardmore » and adjoint solutions are available. Reflective, vacumn, and source boundary conditions are available. ATTILA can perform charged particle transport calculations using slowing down (CSD) terms. ATTILA can also be used to peform infra-red steady-state calculations for radiative transfer purposes.« less

  5. 3D Multigroup Sn Neutron Transport Code

    SciTech Connect

    McGee, John; Wareing, Todd; Pautz, Shawn

    2001-02-14

    ATTILA is a 3D multigroup transport code with arbitrary order ansotropic scatter. The transport equation is solved in first order form using a tri-linear discontinuous spatial differencing on an arbitrary tetrahedral mesh. The overall solution technique is source iteration with DSA acceleration of the scattering source. Anisotropic boundary and internal sources may be entered in the form of spherical harmonics moments. Alpha and k eigenvalue problems are allowed, as well as fixed source problems. Forward and adjoint solutions are available. Reflective, vacumn, and source boundary conditions are available. ATTILA can perform charged particle transport calculations using slowing down (CSD) terms. ATTILA can also be used to peform infra-red steady-state calculations for radiative transfer purposes.

  6. Verification and benchmarking of MAGNUM-2D: a finite element computer code for flow and heat transfer in fractured porous media

    SciTech Connect

    Eyler, L.L.; Budden, M.J.

    1985-03-01

    The objective of this work is to assess prediction capabilities and features of the MAGNUM-2D computer code in relation to its intended use in the Basalt Waste Isolation Project (BWIP). This objective is accomplished through a code verification and benchmarking task. Results are documented which support correctness of prediction capabilities in areas of intended model application. 10 references, 43 figures, 11 tables.

  7. Space Radiation Transport Code Development: 3DHZETRN

    NASA Technical Reports Server (NTRS)

    Wilson, John W.; Slaba, Tony C.; Badavi, Francis F.; Reddell, Brandon D.; Bahadori, Amir A.

    2015-01-01

    The space radiation transport code, HZETRN, has been used extensively for research, vehicle design optimization, risk analysis, and related applications. One of the simplifying features of the HZETRN transport formalism is the straight-ahead approximation, wherein all particles are assumed to travel along a common axis. This reduces the governing equation to one spatial dimension allowing enormous simplification and highly efficient computational procedures to be implemented. Despite the physical simplifications, the HZETRN code is widely used for space applications and has been found to agree well with fully 3D Monte Carlo simulations in many circumstances. Recent work has focused on the development of 3D transport corrections for neutrons and light ions (Z < 2) for which the straight-ahead approximation is known to be less accurate. Within the development of 3D corrections, well-defined convergence criteria have been considered, allowing approximation errors at each stage in model development to be quantified. The present level of development assumes the neutron cross sections have an isotropic component treated within N explicit angular directions and a forward component represented by the straight-ahead approximation. The N = 1 solution refers to the straight-ahead treatment, while N = 2 represents the bi-directional model in current use for engineering design. The figure below shows neutrons, protons, and alphas for various values of N at locations in an aluminum sphere exposed to a solar particle event (SPE) spectrum. The neutron fluence converges quickly in simple geometry with N > 14 directions. The improved code, 3DHZETRN, transports neutrons, light ions, and heavy ions under space-like boundary conditions through general geometry while maintaining a high degree of computational efficiency. A brief overview of the 3D transport formalism for neutrons and light ions is given, and extensive benchmarking results with the Monte Carlo codes Geant4, FLUKA, and

  8. Impurity transport and radiated power loss estimates in NSTX using 2-d USXR arrays

    NASA Astrophysics Data System (ADS)

    Stutman, Dan; Finkenthal, Michael; Vero, Robert; Roquemore, Lane; Johnson, David; Kaita, Robert

    2000-10-01

    Large area, low capacitance, absolute photodiodes have been installed in the three ultrasoft X-ray (USXR) arrays operational on NSTX, for the beginning of the high power operation phase. In addition to bandpass filtered measurements in the USXR range, the absolute diodes enable total radiated power measurements and improve the accuracy of the absolute emissivity estimates. The position of the viewing chords with respect to the NSTX vacuum vessel has been measured using a laser pointing technique and the vignetting of the top array by in-vessel structures calibrated using an in-vessel extended light source. The Granetz-Cormack algorithm with Bessel radial functions is used to derive emissivity maps from the measured brightness profiles. The plasma emission in the spectral ranges defined by the bandpass filters on each array (0.3 μm Ti, 10 μm, 100 μm and 500 μm Be) is modeled using impurity line emission data computed with the HULLAC atomic physics package coupled to a 1-d impurity transport code. The evolution of the USXR emissivity, radiated power, and estimated impurity and plasma profiles during MHD phenomena like the Internal Reconnection Event and sawteeth, as well as emission data for ohmic, auxiliary heated and coaxial helicity injection discharges are presented.

  9. Time-Dependent, Parallel Neutral Particle Transport Code System.

    2009-09-10

    Version 00 PARTISN (PARallel, TIme-Dependent SN) is the evolutionary successor to CCC-547/DANTSYS. The PARTISN code package is a modular computer program package designed to solve the time-independent or dependent multigroup discrete ordinates form of the Boltzmann transport equation in several different geometries. The modular construction of the package separates the input processing, the transport equation solving, and the post processing (or edit) functions into distinct code modules: the Input Module, the Solver Module, and themore » Edit Module, respectively. PARTISN is the evolutionary successor to the DANTSYSTM code system package. The Input and Edit Modules in PARTISN are very similar to those in DANTSYS. However, unlike DANTSYS, the Solver Module in PARTISN contains one, two, and three-dimensional solvers in a single module. In addition to the diamond-differencing method, the Solver Module also has Adaptive Weighted Diamond-Differencing (AWDD), Linear Discontinuous (LD), and Exponential Discontinuous (ED) spatial differencing methods. The spatial mesh may consist of either a standard orthogonal mesh or a block adaptive orthogonal mesh. The Solver Module may be run in parallel for two and three dimensional problems. One can now run 1-D problems in parallel using Energy Domain Decomposition (triggered by Block 5 input keyword npeg>0). EDD can also be used in 2-D/3-D with or without our standard Spatial Domain Decomposition. Both the static (fixed source or eigenvalue) and time-dependent forms of the transport equation are solved in forward or adjoint mode. In addition, PARTISN now has a probabilistic mode for Probability of Initiation (static) and Probability of Survival (dynamic) calculations. Vacuum, reflective, periodic, white, or inhomogeneous boundary conditions are solved. General anisotropic scattering and inhomogeneous sources are permitted. PARTISN solves the transport equation on orthogonal (single level or block-structured AMR) grids in 1-D

  10. 2-D Path Corrections for Local and Regional Coda Waves: A Test of Transportability

    SciTech Connect

    Mayeda, K M; Malagnini, L; Phillips, W S; Walter, W R; Dreger, D S; Morasca, P

    2005-07-13

    Reliable estimates of the seismic source spectrum are necessary for accurate magnitude, yield, and energy estimation. In particular, how seismic radiated energy scales with increasing earthquake size has been the focus of recent debate within the community and has direct implications on earthquake source physics studies as well as hazard mitigation. The 1-D coda methodology of Mayeda et al. [2003] has provided the lowest variance estimate of the source spectrum when compared against traditional approaches that use direct S-waves, thus making it ideal for networks that have sparse station distribution. The 1-D coda methodology has been mostly confined to regions of approximately uniform complexity. For larger, more geophysically complicated regions, 2-D path corrections may be required. We will compare performance of 1-D versus 2-D path corrections in a variety of regions. First, the complicated tectonics of the northern California region coupled with high quality broadband seismic data provides for an ideal ''apples-to-apples'' test of 1-D and 2-D path assumptions on direct waves and their coda. Next, we will compare results for the Italian Alps using high frequency data from the University of Genoa. For Northern California, we used the same station and event distribution and compared 1-D and 2-D path corrections and observed the following results: (1) 1-D coda results reduced the amplitude variance relative to direct S-waves by roughly a factor of 8 (800%); (2) Applying a 2-D correction to the coda resulted in up to 40% variance reduction from the 1-D coda results; (3) 2-D direct S-wave results, though better than 1-D direct waves, were significantly worse than the 1-D coda. We found that coda-based moment-rate source spectra derived from the 2-D approach were essentially identical to those from the 1-D approach for frequencies less than {approx}0.7-Hz, however for the high frequencies (0.7 {le} f {le} 8.0-Hz), the 2-D approach resulted in inter-station scatter

  11. Icarus: A 2D direct simulation Monte Carlo (DSMC) code for parallel computers. User`s manual - V.3.0

    SciTech Connect

    Bartel, T.; Plimpton, S.; Johannes, J.; Payne, J.

    1996-10-01

    Icarus is a 2D Direct Simulation Monte Carlo (DSMC) code which has been optimized for the parallel computing environment. The code is based on the DSMC method of Bird and models from free-molecular to continuum flowfields in either cartesian (x, y) or axisymmetric (z, r) coordinates. Computational particles, representing a given number of molecules or atoms, are tracked as they have collisions with other particles or surfaces. Multiple species, internal energy modes (rotation and vibration), chemistry, and ion transport are modelled. A new trace species methodology for collisions and chemistry is used to obtain statistics for small species concentrations. Gas phase chemistry is modelled using steric factors derived from Arrhenius reaction rates. Surface chemistry is modelled with surface reaction probabilities. The electron number density is either a fixed external generated field or determined using a local charge neutrality assumption. Ion chemistry is modelled with electron impact chemistry rates and charge exchange reactions. Coulomb collision cross-sections are used instead of Variable Hard Sphere values for ion-ion interactions. The electrostatic fields can either be externally input or internally generated using a Langmuir-Tonks model. The Icarus software package includes the grid generation, parallel processor decomposition, postprocessing, and restart software. The commercial graphics package, Tecplot, is used for graphics display. The majority of the software packages are written in standard Fortran.

  12. Comparisons of anomalous and collisional radial transport with a continuum kinetic edge code

    NASA Astrophysics Data System (ADS)

    Bodi, K.; Krasheninnikov, S.; Cohen, R.; Rognlien, T.

    2009-05-01

    Modeling of anomalous (turbulence-driven) radial transport in controlled-fusion plasmas is necessary for long-time transport simulations. Here the focus is continuum kinetic edge codes such as the (2-D, 2-V) transport version of TEMPEST, NEO, and the code being developed by the Edge Simulation Laboratory, but the model also has wider application. Our previously developed anomalous diagonal transport matrix model with velocity-dependent convection and diffusion coefficients allows contact with typical fluid transport models (e.g., UEDGE). Results are presented that combine the anomalous transport model and collisional transport owing to ion drift orbits utilizing a Krook collision operator that conserves density and energy. Comparison is made of the relative magnitudes and possible synergistic effects of the two processes for typical tokamak device parameters.

  13. Strongly Metallic Electron and Hole 2D Transport in an Ambipolar Si-Vacuum Field Effect Transistor

    NASA Astrophysics Data System (ADS)

    Hu, Binhui; Yazdanpanah, M. M.; Kane, B. E.; Hwang, E. H.; Das Sarma, S.

    2015-07-01

    We report experiment and theory on an ambipolar gate-controlled Si(111)-vacuum field effect transistor where we study electron and hole (low-temperature 2D) transport in the same device simply by changing the external gate voltage to tune the system from being a 2D electron system at positive gate voltage to a 2D hole system at negative gate voltage. The electron (hole) conductivity manifests strong (moderate) metallic temperature dependence with the conductivity decreasing by a factor of 8 (2) between 0.3 K and 4.2 K with the peak electron mobility (˜18 m2/V s ) being roughly 20 times larger than the peak hole mobility (in the same sample). Our theory explains the data well using random phase approximation screening of background Coulomb disorder, establishing that the observed metallicity is a direct consequence of the strong temperature dependence of the effective screened disorder.

  14. Electronic Transport Properties of New 2-D Materials GeH and NaSn2As2

    NASA Astrophysics Data System (ADS)

    He, Bin; Cultrara, Nicholas; Arguilla, Maxx; Goldberger, Joshua; Heremans, Joseph

    2-D materials potentially have superior thermoelectric properties compared to traditional 3-D materials due to their layered structure. Here we present electrical and thermoelectric transport properties of 2 types of 2-D materials, GeH and NaSn2As2. GeH is a graphane analog which is prepared using chemical exfoliation of CaGe2 crystals. Intrinsic GeH is proven to be a highly resistive material at room temperature. Resistance and Seebeck coefficient of Ga doped GeH are measured in a cryostat with a gating voltage varying from -100V to 100V. NaSn2As2 is another 2-D system, with Na atom embedded between nearly-2D Sn-As layers. Unlike GeH, NaSn2As2 is a metal based of Hall measurements, with p-type behavior, and with van der Pauw resistances on the order of 5m Ω/square. Thermoelectric transport properties of NaSn2As2 will be reported. This work is support by the NSF EFRI-2DARE project EFRI-1433467.

  15. 2D Electrical Resistivity Tomography surveys optimisation of the solutes transports in porous media.

    NASA Astrophysics Data System (ADS)

    Lekmine, G.; Pessel, M.; Auradou, H.

    2009-04-01

    Electrical resistivity tomography applied in borehole or cross-borehole is a method often used to follow the invasion process of pollutant [Daily, 1991]. The aim of this work is to test experimentally the electrode arrays and inversion process used to obtain a spatial representation of tracer propagation in porous media. Experiments were conducted in a plexiglas container with glass beads of 166 microns in diameter. The height of the container is 275 mm, its width 85 mm and its thickness 10 mm. 21 electrodes, equally spaced, are placed along each of the lateral sides of the porous medium : these electrodes are used to perform the electrical measurements. The porous medium is lightened from behind and a video camera records the propagation of the fluids. The fluid containing the tracer (i.e the pollutant) is a water solution containing a small amount of dye together with NaCl (0.5g/l up to 2.0g/l). The medium is first saturated by a water solution containing a slight concentration of NaCl so that its density is smaller than the injected fluid. An upward flow is first established, then the denser fluid is injected at the bottom and over the full width of the medium. In this way, the flow is stabilized by gravity avoiding the development of unstable fingers. Still, the fluids are miscible and a mixing front develops during the flow: in the present study, both the determination by optical and electrical imaging of the mean position of the front and its width are of interest. The comparison of the two techniques allows to study the ability of the inversion process to quantify the solute transport. The electrical measurements are acquired by a standard multi electrode system (IRIS Instruments) and the data are inverted with the Res2Dinv software which models the 2D distribution of conductivity contrasts. The obtained bulk conductivity can be related through Archie's law to fluid conductivity by the porosity and the cementation factor which have been experimentally

  16. Theoretical Study of Large-Angle Bending Transport of Microparticles by 2D Acoustic Half-Bessel Beams

    PubMed Central

    Li, Yixiang; Qiu, Chunyin; Xu, Shengjun; Ke, Manzhu; Liu, Zhengyou

    2015-01-01

    Conventional microparticle transports by light or sound are realized along a straight line. Recently, this limit has been overcome in optics as the growing up of the self-accelerating Airy beams, which are featured by many peculiar properties, e.g., bending propagation, diffraction-free and self-healing. However, the bending angles of Airy beams are rather small since they are only paraxial solutions of the two-dimensional (2D) Helmholtz equation. Here we propose a novel micromanipulation by using acoustic Half-Bessel beams, which are strict solutions of the 2D Helmholtz equation. Compared with that achieved by Airy beams, the bending angle of the particle trajectory attained here is much steeper (exceeding 90o). The large-angle bending transport of microparticles, which is robust to complex scattering environment, enables a wide range of applications from the colloidal to biological sciences. PMID:26279478

  17. Theoretical Study of Large-Angle Bending Transport of Microparticles by 2D Acoustic Half-Bessel Beams

    NASA Astrophysics Data System (ADS)

    Li, Yixiang; Qiu, Chunyin; Xu, Shengjun; Ke, Manzhu; Liu, Zhengyou

    2015-08-01

    Conventional microparticle transports by light or sound are realized along a straight line. Recently, this limit has been overcome in optics as the growing up of the self-accelerating Airy beams, which are featured by many peculiar properties, e.g., bending propagation, diffraction-free and self-healing. However, the bending angles of Airy beams are rather small since they are only paraxial solutions of the two-dimensional (2D) Helmholtz equation. Here we propose a novel micromanipulation by using acoustic Half-Bessel beams, which are strict solutions of the 2D Helmholtz equation. Compared with that achieved by Airy beams, the bending angle of the particle trajectory attained here is much steeper (exceeding 90o). The large-angle bending transport of microparticles, which is robust to complex scattering environment, enables a wide range of applications from the colloidal to biological sciences.

  18. Theoretical Study of Large-Angle Bending Transport of Microparticles by 2D Acoustic Half-Bessel Beams.

    PubMed

    Li, Yixiang; Qiu, Chunyin; Xu, Shengjun; Ke, Manzhu; Liu, Zhengyou

    2015-01-01

    Conventional microparticle transports by light or sound are realized along a straight line. Recently, this limit has been overcome in optics as the growing up of the self-accelerating Airy beams, which are featured by many peculiar properties, e.g., bending propagation, diffraction-free and self-healing. However, the bending angles of Airy beams are rather small since they are only paraxial solutions of the two-dimensional (2D) Helmholtz equation. Here we propose a novel micromanipulation by using acoustic Half-Bessel beams, which are strict solutions of the 2D Helmholtz equation. Compared with that achieved by Airy beams, the bending angle of the particle trajectory attained here is much steeper (exceeding 90(o)). The large-angle bending transport of microparticles, which is robust to complex scattering environment, enables a wide range of applications from the colloidal to biological sciences. PMID:26279478

  19. Topologically robust transport of entangled photons in a 2D photonic system.

    PubMed

    Mittal, Sunil; Orre, Venkata Vikram; Hafezi, Mohammad

    2016-07-11

    We theoretically study the transport of time-bin entangled photon pairs in a two-dimensional topological photonic system of coupled ring resonators. This system implements the integer quantum Hall model using a synthetic gauge field and exhibits topologically robust edge states. We show that the transport through edge states preserves temporal correlations of entangled photons whereas bulk transport does not preserve these correlations and can lead to significant unwanted temporal bunching or anti-bunching of photons. We study the effect of disorder on the quantum transport properties; while the edge transport remains robust, bulk transport is very susceptible, and in the limit of strong disorder, bulk states become localized. We show that this localization is manifested as an enhanced bunching/anti-bunching of photons. This topologically robust transport of correlations through edge states could enable robust on-chip quantum communication channels and delay lines for information encoded in temporal correlations of photons. PMID:27410836

  20. Los Alamos radiation transport code system on desktop computing platforms

    SciTech Connect

    Briesmeister, J.F.; Brinkley, F.W.; Clark, B.A.; West, J.T. )

    1990-01-01

    The Los Alamos Radiation Transport Code System (LARTCS) consists of state-of-the-art Monte Carlo and discrete ordinates transport codes and data libraries. These codes were originally developed many years ago and have undergone continual improvement. With a large initial effort and continued vigilance, the codes are easily portable from one type of hardware to another. The performance of scientific work-stations (SWS) has evolved to the point that such platforms can be used routinely to perform sophisticated radiation transport calculations. As the personal computer (PC) performance approaches that of the SWS, the hardware options for desk-top radiation transport calculations expands considerably. The current status of the radiation transport codes within the LARTCS is described: MCNP, SABRINA, LAHET, ONEDANT, TWODANT, TWOHEX, and ONELD. Specifically, the authors discuss hardware systems on which the codes run and present code performance comparisons for various machines.

  1. SYMTRAN - A Time-dependent Symmetric Tandem Mirror Transport Code

    SciTech Connect

    Hua, D; Fowler, T

    2004-06-15

    A time-dependent version of the steady-state radial transport model in symmetric tandem mirrors in Ref. [1] has been coded up and first tests performed. Our code, named SYMTRAN, is an adaptation of the earlier SPHERE code for spheromaks, now modified for tandem mirror physics. Motivated by Post's new concept of kinetic stabilization of symmetric mirrors, it is an extension of the earlier TAMRAC rate-equation code omitting radial transport [2], which successfully accounted for experimental results in TMX. The SYMTRAN code differs from the earlier tandem mirror radial transport code TMT in that our code is focused on axisymmetric tandem mirrors and classical diffusion, whereas TMT emphasized non-ambipolar transport in TMX and MFTF-B due to yin-yang plugs and non-symmetric transitions between the plugs and axisymmetric center cell. Both codes exhibit interesting but different non-linear behavior.

  2. Crossover from 3D to 2D Quantum Transport in Bi2Se3/In2Se3 Superlattices

    NASA Astrophysics Data System (ADS)

    Yanfei, Zhao; Haiwen, Liu; Xin, Guo; Ying, Jiang; Yi, Sun; Huichao, Wang; Yong, Wang; Handong, Li; Maohai, Xie; Xincheng, Xie; Jian, Wang

    2015-03-01

    The topological insulator/normal insulator (TI/NI) superlattices (SLs) with multiple Dirac channels are predicted to offer great opportunity to design novel materials and investigate new quantum phenomena. Here, we report first transport studies on the SLs composed of TI Bi2Se3 layers sandwiched by NI In2Se3 layers artificially grown by molecular beam epitaxy (MBE). The transport properties of two kinds of SL samples show convincing evidence that the transport dimensionality changes from three-dimensional (3D) to two-dimensional (2D) when decreasing the thickness of building block Bi2Se3 layers, corresponding to the crossover from coherent TI transport to separated TI channels. Our findings provide the possibility to realizing 3D surface states in TI/NI SLs.

  3. Crossover from 3D to 2D quantum transport in Bi2Se3/In2Se3 superlattices.

    PubMed

    Zhao, Yanfei; Liu, Haiwen; Guo, Xin; Jiang, Ying; Sun, Yi; Wang, Huichao; Wang, Yong; Li, Han-Dong; Xie, Mao-Hai; Xie, Xin-Cheng; Wang, Jian

    2014-09-10

    The topological insulator/normal insulator (TI/NI) superlattices (SLs) with multiple Dirac channels are predicted to offer great opportunity to design novel materials and investigate new quantum phenomena. Here, we report first transport studies on the SLs composed of TI Bi2Se3 layers sandwiched by NI In2Se3 layers artificially grown by molecular beam epitaxy (MBE). The transport properties of two kinds of SL samples show convincing evidence that the transport dimensionality changes from three-dimensional (3D) to two-dimensional (2D) when decreasing the thickness of building block Bi2Se3 layers, corresponding to the crossover from coherent TI transport to separated TI channels. Our findings provide the possibility to realizing "3D surface states" in TI/NI SLs. PMID:25102289

  4. Description of Transport Codes for Space Radiation Shielding

    NASA Technical Reports Server (NTRS)

    Kim, Myung-Hee Y.; Wilson, John W.; Cucinotta, Francis A.

    2011-01-01

    This slide presentation describes transport codes and their use for studying and designing space radiation shielding. When combined with risk projection models radiation transport codes serve as the main tool for study radiation and designing shielding. There are three criteria for assessing the accuracy of transport codes: (1) Ground-based studies with defined beams and material layouts, (2) Inter-comparison of transport code results for matched boundary conditions and (3) Comparisons to flight measurements. These three criteria have a very high degree with NASA's HZETRN/QMSFRG.

  5. Spin Hall effect and spin transport in graphene and 2D heterostructures

    NASA Astrophysics Data System (ADS)

    Oezyilmaz, Barbaros

    Semiconducting 2D materials offer new opportunities in both alternative technologies and fundamental discoveries by using the spin degree freedom of electrons. One of the main challenges in this field is to identify new materials which allow the control of spin currents by means of the electric field effect. This requires either a sizeable spin-orbit coupling strength or a sizeable bandgap or both. Unfortunately, pristine graphene has a negligibly small spin-orbit coupling strength. Recently we have addressed this problem in three distinct ways. First we have used chemical functionalization to introduce locally sp3 type bonding. Next we used metal ad-atoms to increase spin-orbit coupling via local enhancement of the spin-orbit coupling strength due to resonant scattering. Finally, I will show that the proximity of graphene on transition metal dichalcogenides can also lead to a significant enhancement of the spin-orbit coupling strength. I will complete my talk with a brief discussion on the possibility of all electrical spin injection into complementary 2D crystals such as WS2, MoS2 or black phosphorus. Membership Pending in the abstract Special Instructions field.

  6. High-field and thermal transport in 2D atomic layer devices

    NASA Astrophysics Data System (ADS)

    Serov, Andrey; Dorgan, Vincent E.; Behnam, Ashkan; English, Chris D.; Li, Zuanyi; Islam, Sharnali; Pop, Eric

    2014-06-01

    This paper reviews our recent results of high-field electrical and thermal properties of atomically thin two-dimensional materials. We show how self-heating affects velocity saturation in suspended and supported graphene. We also demonstrate that multi-valley transport must be taken into account to describe high-field transport in MoS2. At the same time we characterized thermal properties of suspended and nanoscale graphene samples over a wide range of temperatures. We uncovered the effects of edge scattering and grain boundaries on thermal transport in graphene, and showed how the thermal conductivity varies between diffusive and ballistic heat flow limits.

  7. Insights on the physics and application of off-plane quantum transport through graphene and 2D materials

    NASA Astrophysics Data System (ADS)

    Iannaccone, G.; Zhang, Q.; Bruzzone, S.; Fiori, G.

    2016-01-01

    Different proposals of graphene transistors based on off-plane (i.e., vertical) transport, have recently appeared in the literature, exhibiting experimental current modulation of a factor 104-105 at room temperature. These devices overcome the lack of bandgap that undermines the operation of graphene transistors, and positively exploit graphene's ultimate thinness, high conductivity, and low density of states. However, very little is known about vertical transport through graphene and two-dimensional materials, either in terms of experiments or theory. In this paper we will discuss the physics and the electronics of off-plane transport through hetero-structures of graphene and 2D materials. We investigate transport across vertical heterostructures of 2D materials with multi-scale simulations, including first-principle density functional theory and non-equilibrium Green's functions based on NanoTCAD ViDES. We show that unexpected behaviors emerge, which are not observed in the more familiar semiconductor heterostructures based on III-V and II-VI materials systems, and that are not predicted by simplistic physical models. Such properties have a significant impact on the design and performance of transistors for digital or high frequency operations.

  8. Numerical model of water flow and solute accumulation in vertisols using HYDRUS 2D/3D code

    NASA Astrophysics Data System (ADS)

    Weiss, Tomáš; Dahan, Ofer; Turkeltub, Tuvia

    2015-04-01

    boundary to the wall of the crack (so that the solute can accumulate due to evaporation on the crack block wall, and infiltrating fresh water can push the solute further down) - in order to do so, HYDRUS 2D/3D code had to be modified by its developers. Unconventionally, the main fitting parameters were: parameter a and n in the soil water retention curve and saturated hydraulic conductivity. The amount of infiltrated water (within a reasonable range), the infiltration function in the crack and the actual evaporation from the crack were also used as secondary fitting parameters. The model supports the previous findings that significant amount (~90%) of water from rain events must infiltrate through the crack. It was also noted that infiltration from the crack has to be increasing with depth and that the highest infiltration rate should be somewhere between 1-3m. This paper suggests a new way how to model vertisols in semi-arid regions. It also supports the previous findings about vertisols: especially, the utmost importance of soil cracks as preferential pathways for water and contaminants and soil cracks as deep evaporators.

  9. Benchmarking multilevel, 2-D cylindrical radiation transport in a high energy density plasma environment

    NASA Astrophysics Data System (ADS)

    Apruzese, J. P.; Giuliani, J. L.; Hansen, S. B.

    2012-09-01

    In modeling optically thick, high energy density plasmas (HEDP), radiation transport is of comparable importance to atomic physics, hydrodynamics, and other transport processes. Radiation transport theory is the framework for calculating radiation output based on atomic kinetics, and is thus critical to designing and diagnosing experiments in which radiation production is significant. Starting in the 1960s, the astrophysics community established benchmarks for computational radiation transport, based on a parameterized two-level-atom, and mostly applicable to media with very high optical depths and low collisional quenching of radiative transitions. The purpose of the work reported here is to establish a similar computational radiation transport benchmark that is more relevant to a laboratory HEDP environment. Our model consists of 8 levels of mostly K-shell Al ions, ranging from the ground state of Li-like Al to its bare nucleus. Rates connecting the levels are given by well-known, readily reproducible analytic prescriptions. The results presented consist of level populations as a function of position within the cylindrical medium, and emitted line profiles. For the plasma conditions considered, the magnitudes and spatial variations of the populations are a sensitive indicator of the accuracy of the radiation transport model, and are critical in calculating experimentally relevant quantities such as radiative powers and line ratios.

  10. Code System To Analyze Radiological Impact From Radwaste Transportation.

    1988-05-01

    Version 00 RADSHIP-2 is a computer code system used to analyze the environmental impact of radwaste transportation in Taiwan. The specific transport scheme including the land transport by truck and sea transport by ship or barge were considered in the analysis for normal transport and transport accident conditions. The code combines meteorological, population, health physics, transportation, packaging and material factors and has the capability to obtain the results of the expected annual population radiation exposure,more » the expected number of annual latent cancer fatalities and the annual probability of a given number of early fatalities.« less

  11. Pangolin v1.0, a conservative 2-D transport model for large scale parallel calculation

    NASA Astrophysics Data System (ADS)

    Praga, A.; Cariolle, D.; Giraud, L.

    2014-07-01

    To exploit the possibilities of parallel computers, we designed a large-scale bidimensional atmospheric transport model named Pangolin. As the basis for a future chemistry-transport model, a finite-volume approach was chosen both for mass preservation and to ease parallelization. To overcome the pole restriction on time-steps for a regular latitude-longitude grid, Pangolin uses a quasi-area-preserving reduced latitude-longitude grid. The features of the regular grid are exploited to improve parallel performances and a custom domain decomposition algorithm is presented. To assess the validity of the transport scheme, its results are compared with state-of-the-art models on analytical test cases. Finally, parallel performances are shown in terms of strong scaling and confirm the efficient scalability up to a few hundred of cores.

  12. Modelling river bank erosion using a 2D depth-averaged numerical model of flow and non-cohesive, non-uniform sediment transport

    NASA Astrophysics Data System (ADS)

    El Kadi Abderrezzak, Kamal; Die Moran, Andrés; Tassi, Pablo; Ata, Riadh; Hervouet, Jean-Michel

    2016-07-01

    Bank erosion can be an important form of morphological adjustment in rivers. With the advances made in computational techniques, two-dimensional (2D) depth-averaged numerical models have become valuable tools for resolving many engineering problems dealing with sediment transport. The objective of this research work is to present a simple, new, bank-erosion operator that is integrated into a 2D Saint-Venant-Exner morphodynamic model. The numerical code is based on an unstructured grid of triangular elements and finite-element algorithms. The slope of each element in the grid is compared to the angle of repose of the bank material. Elements for which the slope is too steep are tilted to bring them to the angle of repose along a horizontal axis defined such that the volume loss above the axis is equal to the volume gain below, thus ensuring mass balance. The model performance is assessed using data from laboratory flume experiments and a scale model of the Old Rhine. For the flume experiment case with uniform bank material, relevant results are obtained for bank geometry changes. For the more challenging case (i.e. scale model of the Old Rhine with non-uniform bank material), the numerical model is capable of reproducing the main features of the bank failure, induced by the newly designed groynes, as well as the transport of the mobilized sediment material downstream. Some deviations between the computed results and measured data are, however, observed. They are ascribed to the effects of three-dimensional (3D) flow structures, pore pressure and cohesion, which are not considered in the present 2D model.

  13. Transport Equations Resolution By N-BEE Anti-Dissipative Scheme In 2D Model Of Low Pressure Glow Discharge

    SciTech Connect

    Kraloua, B.; Hennad, A.

    2008-09-23

    The aim of this paper is to determine electric and physical properties by 2D modelling of glow discharge low pressure in continuous regime maintained by term constant source. This electric discharge is confined in reactor plan-parallel geometry. This reactor is filled by Argon monatomic gas. Our continuum model the order two is composed the first three moments the Boltzmann's equations coupled with Poisson's equation by self consistent method. These transport equations are discretized by the finite volumes method. The equations system is resolved by a new technique, it is about the N-BEE explicit scheme using the time splitting method.

  14. SUTRA: A model for 2D or 3D saturated-unsaturated, variable-density ground-water flow with solute or energy transport

    USGS Publications Warehouse

    Voss, Clifford I.; Provost, A.M.

    2002-01-01

    SUTRA (Saturated-Unsaturated Transport) is a computer program that simulates fluid movement and the transport of either energy or dissolved substances in a subsurface environment. This upgraded version of SUTRA adds the capability for three-dimensional simulation to the former code (Voss, 1984), which allowed only two-dimensional simulation. The code employs a two- or three-dimensional finite-element and finite-difference method to approximate the governing equations that describe the two interdependent processes that are simulated: 1) fluid density-dependent saturated or unsaturated ground-water flow; and 2) either (a) transport of a solute in the ground water, in which the solute may be subject to: equilibrium adsorption on the porous matrix, and both first-order and zero-order production or decay; or (b) transport of thermal energy in the ground water and solid matrix of the aquifer. SUTRA may also be used to simulate simpler subsets of the above processes. A flow-direction-dependent dispersion process for anisotropic media is also provided by the code and is introduced in this report. As the primary calculated result, SUTRA provides fluid pressures and either solute concentrations or temperatures, as they vary with time, everywhere in the simulated subsurface system. SUTRA flow simulation may be employed for two-dimensional (2D) areal, cross sectional and three-dimensional (3D) modeling of saturated ground-water flow systems, and for cross sectional and 3D modeling of unsaturated zone flow. Solute-transport simulation using SUTRA may be employed to model natural or man-induced chemical-species transport including processes of solute sorption, production, and decay. For example, it may be applied to analyze ground-water contaminant transport problems and aquifer restoration designs. In addition, solute-transport simulation with SUTRA may be used for modeling of variable-density leachate movement, and for cross sectional modeling of saltwater intrusion in

  15. A Deterministic Transport Code for Space Environment Electrons

    NASA Technical Reports Server (NTRS)

    Nealy, John E.; Chang, C. K.; Norman, Ryan B.; Blattnig, Steve R.; Badavi, Francis F.; Adamczyk, Anne M.

    2010-01-01

    A deterministic computational procedure has been developed to describe transport of space environment electrons in various shield media. This code is an upgrade and extension of an earlier electron code. Whereas the former code was formulated on the basis of parametric functions derived from limited laboratory data, the present code utilizes well established theoretical representations to describe the relevant interactions and transport processes. The shield material specification has been made more general, as have the pertinent cross sections. A combined mean free path and average trajectory approach has been used in the transport formalism. Comparisons with Monte Carlo calculations are presented.

  16. Recent developments in the Los Alamos radiation transport code system

    SciTech Connect

    Forster, R.A.; Parsons, K.

    1997-06-01

    A brief progress report on updates to the Los Alamos Radiation Transport Code System (LARTCS) for solving criticality and fixed-source problems is provided. LARTCS integrates the Diffusion Accelerated Neutral Transport (DANT) discrete ordinates codes with the Monte Carlo N-Particle (MCNP) code. The LARCTS code is being developed with a graphical user interface for problem setup and analysis. Progress in the DANT system for criticality applications include a two-dimensional module which can be linked to a mesh-generation code and a faster iteration scheme. Updates to MCNP Version 4A allow statistical checks of calculated Monte Carlo results.

  17. Atmospheric Nitrogen Trifluoride: Optimized emission estimates using 2-D and 3-D Chemical Transport Models from 1973-2008

    NASA Astrophysics Data System (ADS)

    Ivy, D. J.; Rigby, M. L.; Prinn, R. G.; Muhle, J.; Weiss, R. F.

    2009-12-01

    We present optimized annual global emissions from 1973-2008 of nitrogen trifluoride (NF3), a powerful greenhouse gas which is not currently regulated by the Kyoto Protocol. In the past few decades, NF3 production has dramatically increased due to its usage in the semiconductor industry. Emissions were estimated through the 'pulse-method' discrete Kalman filter using both a simple, flexible 2-D 12-box model used in the Advanced Global Atmospheric Gases Experiment (AGAGE) network and the Model for Ozone and Related Tracers (MOZART v4.5), a full 3-D atmospheric chemistry model. No official audited reports of industrial NF3 emissions are available, and with limited information on production, a priori emissions were estimated using both a bottom-up and top-down approach with two different spatial patterns based on semiconductor perfluorocarbon (PFC) emissions from the Emission Database for Global Atmospheric Research (EDGAR v3.2) and Semiconductor Industry Association sales information. Both spatial patterns used in the models gave consistent results, showing the robustness of the estimated global emissions. Differences between estimates using the 2-D and 3-D models can be attributed to transport rates and resolution differences. Additionally, new NF3 industry production and market information is presented. Emission estimates from both the 2-D and 3-D models suggest that either the assumed industry release rate of NF3 or industry production information is still underestimated.

  18. Advanced Nodal P3/SP3 Axial Transport Solvers for the MPACT 2D/1D Scheme

    SciTech Connect

    Stimpson, Shane G; Collins, Benjamin S

    2015-01-01

    As part of its initiative to provide multiphysics simulations of nuclear reactor cores, the Consortium for Advanced Simulation of Light Water Reactors (CASL) is developing the Virtual Environment for Reactor Applications Core Simulator (VERA-CS). The MPACT code, which is the primary neutron transport solver of VERA-CS, employs the two-dimensional/one-dimensional (2D/1D) method to solve 3-dimensional neutron transport problems and provide sub-pin-level resolution of the power distribution. While 2D method of characteristics is used to solve for the transport effects within each plane, 1D-nodal methods are used axially. There have been extensive studies of the 2D/1D method with a variety nodal methods, and the P3/SP3 solver has proved to be an effective method of providing higher-fidelity solutions while maintaining a low computational burden.The current implementation in MPACT wraps a one-node nodal expansion method (NEM) kernel for each moment, iterating between them and performing multiple sweeps to resolve flux distributions. However, it has been observed that this approach is more sensitive to convergence problems. This paper documents the theory and application two new nodal P3/SP3 approaches to be used within the 2D/1D method in MPACT. These two approaches aim to provide enhanced stability compared with the pre-existing one-node approach. Results from the HY-NEM-SP3 solver show that the accuracy is consistent with the one-node formulations and provides improved convergence for some problems; but the solver has issues with cases in thin planes. Although the 2N-SENM-SP3 solver is still under development, it is intended to resolve the issues with HY-NEM-SP3 but it will incur some additional computational burden by necessitating an additional 1D-CMFD-P3 solver to generate the second moment cell-averaged scalar flux.

  19. 2D coherent charge transport in highly ordered conducting polymers doped by solid state diffusion

    NASA Astrophysics Data System (ADS)

    Kang, Keehoon; Watanabe, Shun; Broch, Katharina; Sepe, Alessandro; Brown, Adam; Nasrallah, Iyad; Nikolka, Mark; Fei, Zhuping; Heeney, Martin; Matsumoto, Daisuke; Marumoto, Kazuhiro; Tanaka, Hisaaki; Kuroda, Shin-Ichi; Sirringhaus, Henning

    2016-08-01

    Doping is one of the most important methods to control charge carrier concentration in semiconductors. Ideally, the introduction of dopants should not perturb the ordered microstructure of the semiconducting host. In some systems, such as modulation-doped inorganic semiconductors or molecular charge transfer crystals, this can be achieved by spatially separating the dopants from the charge transport pathways. However, in conducting polymers, dopants tend to be randomly distributed within the conjugated polymer, and as a result the transport properties are strongly affected by the resulting structural and electronic disorder. Here, we show that in the highly ordered lamellar microstructure of a regioregular thiophene-based conjugated polymer, a small-molecule p-type dopant can be incorporated by solid state diffusion into the layers of solubilizing side chains without disrupting the conjugated layers. In contrast to more disordered systems, this allows us to observe coherent, free-electron-like charge transport properties, including a nearly ideal Hall effect in a wide temperature range, a positive magnetoconductance due to weak localization and the Pauli paramagnetic spin susceptibility.

  20. Developing a 2D vertical flow and sediment transport model for open channels using the Youngs-VOF method

    NASA Astrophysics Data System (ADS)

    Zhao, Dongmiao; Tang, Jun; Wu, Xiuguang; Lin, Changning; Liu, Lijun; Chen, Jian

    2016-05-01

    A 2D vertical (2DV) numerical model, without σ-coordinate transformation in the vertical direction, is developed for the simulation of fl ow and sediment transport in open channels. In the model, time-averaged Reynolds equations are closed by the k-ɛ nonlinear turbulence model. The modifi ed Youngs-VOF method is introduced to capture free surface dynamics, and the free surface slope is simulated using the ELVIRA method. Based on the power-law scheme, the k-ɛ model and the suspended-load transport model are solved numerically with an implicit scheme applied in the vertical plane and an explicit scheme applied in the horizontal plane. Bedload transport is modeled using the Euler-WENO scheme, and the grid-closing skill is adopted to deal with the moving channel bed boundary. Verifi cation of the model using laboratory data shows that the model is able to adequately simulate fl ow and sediment transport in open channels, and is a good starting point for the study of sediment transport dynamics in strong nonlinear fl ow scenarios.

  1. Dopamine D(2)/D(3)-receptor and transporter densities in nucleus accumbens and amygdala of type 1 and 2 alcoholics.

    PubMed

    Tupala, E; Hall, H; Bergström, K; Särkioja, T; Räsänen, P; Mantere, T; Callaway, J; Hiltunen, J; Tiihonen, J

    2001-05-01

    Alcohol acts through mechanisms involving the brain neurotransmitter dopamine (DA) with the nucleus accumbens as the key zone for mediating these effects. We evaluated the densities of DA D(2)/D(3) receptors and transporters in the nucleus accumbens and amygdala of post-mortem human brains by using [(125)l]epidepride and [(125)I]PE2I as radioligands in whole hemispheric autoradiography of Cloninger type 1 and 2 alcoholics and healthy controls. When compared with controls, the mean binding of [(125)I]epidepride to DA D(2)/D(3) receptors was 20% lower in the nucleus accumbens and 41% lower in the amygdala, and [(125)I]PE2I binding to DA transporters in the nucleus accumbens was 39% lower in type 1 alcoholics. These data indicate that dopaminergic functions in these limbic areas may be impaired among type 1 alcoholics, due to the substantially lower number of receptor sites. Our results suggest that such a reduction may result in the chronic overuse of alcohol as an attempt to stimulate DA function. PMID:11326293

  2. Discontinuous diffusion synthetic acceleration for S{sub n} transport on 2D arbitrary polygonal meshes

    SciTech Connect

    Turcksin, Bruno Ragusa, Jean C.

    2014-10-01

    In this paper, a Diffusion Synthetic Acceleration (DSA) technique applied to the S{sub n} radiation transport equation is developed using Piece-Wise Linear Discontinuous (PWLD) finite elements on arbitrary polygonal grids. The discretization of the DSA equations employs an Interior Penalty technique, as is classically done for the stabilization of the diffusion equation using discontinuous finite element approximations. The penalty method yields a system of linear equations that is Symmetric Positive Definite (SPD). Thus, solution techniques such as Preconditioned Conjugate Gradient (PCG) can be effectively employed. Algebraic MultiGrid (AMG) and Symmetric Gauss–Seidel (SGS) are employed as conjugate gradient preconditioners for the DSA system. AMG is shown to be significantly more efficient than SGS. Fourier analyses are carried out and we show that this discontinuous finite element DSA scheme is always stable and effective at reducing the spectral radius for iterative transport solves, even for grids with high-aspect ratio cells. Numerical results are presented for different grid types: quadrilateral, hexagonal, and polygonal grids as well as grids with local mesh adaptivity.

  3. Coherent heat transport in 2D phononic crystals with acoustic impedance mismatch

    NASA Astrophysics Data System (ADS)

    Arantes, A.; Anjos, V.

    2016-03-01

    In this work we have calculated the cumulative thermal conductivities of micro-phononic crystals formed by different combinations of inclusions and matrices at a sub-Kelvin temperature regime. The low-frequency phonon spectra (up to tens of GHz) were obtained by solving the generalized wave equation for inhomogeneous media with the plane wave expansion method. The thermal conductivity was calculated from Boltzmann transport theory highlighting the role of the low-frequency thermal phonons and neglecting phonon-phonon scattering. A purely coherent thermal transport regime was assumed throughout the structures. Our findings show that the cumulative thermal conductivity drops dramatically when compared with their bulk counterpart. Depending on the structural composition this reduction may be attributed to the phonon group velocity due to a flattening of the phonon dispersion relation, the extinction of phonon modes in the density of states or due to the presence of complete band gaps. According to the contrast between the inclusions and the matrices, three types of two dimensional phononic crystals were considered: carbon/epoxy, carbon/polyethylene and tungsten/silicon, which correspond respectively to a moderate, strong and very strong mismatch in the mechanical properties of these materials.

  4. High conductance 2D transport around the Hall mobility peak in electrolyte-gated rubrene crystals.

    PubMed

    Xie, Wei; Wang, Shun; Zhang, Xin; Leighton, C; Frisbie, C Daniel

    2014-12-12

    We report the observation of the Hall effect at hole densities up to 6×10¹³ cm⁻² (0.3  holes/molecule) on the surface of electrolyte-gated rubrene crystals. The perplexing peak in the conductance as a function of gate voltage is confirmed to result from a maximum in mobility, which reaches 4  cm² V⁻¹ s⁻¹ at 2.5×10¹³ cm⁻². Measurements to liquid helium temperatures reveal that this peak is markedly asymmetric, with bandlike and hopping-type transport occurring on the low density side, while unconventional, likely electrostatic-disorder-affected transport dominates the high density side. Most significantly, near the mobility peak the temperature coefficient of the resistance remains positive to as low as 120 K, the low temperature resistance becomes weakly temperature dependent, and the conductance reaches within a factor of 2 of e²/h, revealing conduction unprecedentedly close to a two-dimensional metallic state. PMID:25541790

  5. Coupled 2-dimensional cascade theory for noise an d unsteady aerodynamics of blade row interaction in turbofans. Volume 2: Documentation for computer code CUP2D

    NASA Technical Reports Server (NTRS)

    Hanson, Donald B.

    1994-01-01

    A two dimensional linear aeroacoustic theory for rotor/stator interaction with unsteady coupling was derived and explored in Volume 1 of this report. Computer program CUP2D has been written in FORTRAN embodying the theoretical equations. This volume (Volume 2) describes the structure of the code, installation and running, preparation of the input file, and interpretation of the output. A sample case is provided with printouts of the input and output. The source code is included with comments linking it closely to the theoretical equations in Volume 1.

  6. Transport of aurorally produced N/2D/ by winds in the high latitude thermosphere

    NASA Technical Reports Server (NTRS)

    Gerard, J.-C.; Roble, R. G.

    1982-01-01

    A time-dependent, two-dimensional model is developed for describing the meridional circulation of thermospheric odd nitrogen species produced in the auroral zone. The model is based on a previous model by Roble and Gary (1979) extended to upper altitude transport of the nitrogen species. Assumptions made include the existence of a steady neutral wind flowing from low to high latitudes, and an initial background due to scattered Lyman-beta and nightglow emissions. The aurora is also assumed as steady, along with a constant ion production. Predictions made using the model are compared with observations with the Atmosphere Explorer C spacecraft and rocket sounding measurements of the 5200 A distribution near the day-side polar cusp. The model requires thermospheric winds of 100-200 m/sec, flowing from day to nightside. Convective velocities near 1000 m/sec were detected by the Explorer spacecraft, as well as a day-to-nightside flow at the cusp.

  7. Parallel FE Electron-Photon Transport Analysis on 2-D Unstructured Mesh

    SciTech Connect

    Drumm, C.R.; Lorenz, J.

    1999-03-02

    A novel solution method has been developed to solve the coupled electron-photon transport problem on an unstructured triangular mesh. Instead of tackling the first-order form of the linear Boltzmann equation, this approach is based on the second-order form in conjunction with the conventional multi-group discrete-ordinates approximation. The highly forward-peaked electron scattering is modeled with a multigroup Legendre expansion derived from the Goudsmit-Saunderson theory. The finite element method is used to treat the spatial dependence. The solution method is unique in that the space-direction dependence is solved simultaneously, eliminating the need for the conventional inner iterations, a method that is well suited for massively parallel computers.

  8. TORUS: Radiation transport and hydrodynamics code

    NASA Astrophysics Data System (ADS)

    Harries, Tim

    2014-04-01

    TORUS is a flexible radiation transfer and radiation-hydrodynamics code. The code has a basic infrastructure that includes the AMR mesh scheme that is used by several physics modules including atomic line transfer in a moving medium, molecular line transfer, photoionization, radiation hydrodynamics and radiative equilibrium. TORUS is useful for a variety of problems, including magnetospheric accretion onto T Tauri stars, spiral nebulae around Wolf-Rayet stars, discs around Herbig AeBe stars, structured winds of O supergiants and Raman-scattered line formation in symbiotic binaries, and dust emission and molecular line formation in star forming clusters. The code is written in Fortran 2003 and is compiled using a standard Gnu makefile. The code is parallelized using both MPI and OMP, and can use these parallel sections either separately or in a hybrid mode.

  9. Vectorization of a 2D-1D Iterative Algorithm for the 3D Neutron Transport Problem in Prismatic Geometries

    NASA Astrophysics Data System (ADS)

    Moustafa, Salli; Févotte, François; Lathuilière, Bruno; Plagne, Laurent

    2014-06-01

    The past few years have been marked by a noticeable increase in the interest in 3D whole-core heterogeneous deterministic neutron transport solvers for reference calculations. Due to the extremely large problem sizes tackled by such solvers, they need to use adapted numerical methods and need to be efficiently implemented to take advantage of the full computing power of modern systems. As for numerical methods, one possible approach consists in iterating over resolutions of 2D and 1D MOC problems by taking advantage of prismatic geometries. The MICADO solver, developed at EDF R&D, is a parallel implementation of such a method in distributed and shared memory systems. However it is currently unable to use SIMD vectorization to leverage the full computing power of modern CPUs. In this paper, we describe our first effort to support vectorization in MICADO, typically targeting Intel© SSE CPUs. Both the 2D and 1D algorithms are vectorized, allowing for high expected speedups for the whole spatial solver. We present benchmark computations, which show nearly optimal speedups for our vectorized implementation on the TAKEDA case.

  10. Calibration of the 2D Hydrodynamic Model Floodos and Implications of Distributed Friction on Sediment Transport Capacity

    NASA Astrophysics Data System (ADS)

    Croissant, T.; Lague, D.; Davy, P.

    2014-12-01

    Numerical models of floodplain dynamics often use a simplified 1D description of flow hydraulics and sediment transport that cannot fully account for differential friction between vegetated banks and low friction in the main channel. Key parameters of such models are the friction coefficient and the description of the channel bathymetry which strongly influence predicted water depth and velocity, and therefore sediment transport capacity. In this study, we use a newly developed 2D hydrodynamic model, Floodos, whose efficiency is a major advantage for exploring channel morphodynamics from a flood event to millennial time scales. We evaluate the quality of Floodos predictions in the Whataroa river, New Zealand and assess the effect of a spatially distributed friction coefficient (SDFC) on long term sediment transport. Predictions from the model are compared to water depth data from a gauging station located on the Whataroa River in Southern Alps, New Zealand. The Digital Elevation Model (DEM) of the 2.5 km long studied reach is derived from a 2010 LiDAR acquisition with 2 m resolution and an interpolated bathymetry. The several large floods experienced by this river during 2010 allow us to access water depth for a wide range of possible river discharges and to retrieve the scaling between these two parameters. The high resolution DEM used has a non-negligible part of submerged bathymetry that airborne LiDAR was not able to capture. Bathymetry can be reconstructed by interpolation methods that introduce several uncertainties concerning water depth predictions. We address these uncertainties inherent to the interpolation using a simplified channel with a geometry (slope and width) similar to the Whataroa river. We then explore the effect of a SDFC on velocity pattern, water depth and sediment transport capacity and discuss its relevance on long term predictions of sediment transport and channel morphodynamics.

  11. Note: Reliable and non-contact 6D motion tracking system based on 2D laser scanners for cargo transportation

    SciTech Connect

    Kim, Young-Keun; Kim, Kyung-Soo

    2014-10-15

    Maritime transportation demands an accurate measurement system to track the motion of oscillating container boxes in real time. However, it is a challenge to design a sensor system that can provide both reliable and non-contact methods of 6-DOF motion measurements of a remote object for outdoor applications. In the paper, a sensor system based on two 2D laser scanners is proposed for detecting the relative 6-DOF motion of a crane load in real time. Even without implementing a camera, the proposed system can detect the motion of a remote object using four laser beam points. Because it is a laser-based sensor, the system is expected to be highly robust to sea weather conditions.

  12. Note: Reliable and non-contact 6D motion tracking system based on 2D laser scanners for cargo transportation

    NASA Astrophysics Data System (ADS)

    Kim, Young-Keun; Kim, Kyung-Soo

    2014-10-01

    Maritime transportation demands an accurate measurement system to track the motion of oscillating container boxes in real time. However, it is a challenge to design a sensor system that can provide both reliable and non-contact methods of 6-DOF motion measurements of a remote object for outdoor applications. In the paper, a sensor system based on two 2D laser scanners is proposed for detecting the relative 6-DOF motion of a crane load in real time. Even without implementing a camera, the proposed system can detect the motion of a remote object using four laser beam points. Because it is a laser-based sensor, the system is expected to be highly robust to sea weather conditions.

  13. FACET: a radiation view factor computer code for axisymmetric, 2D planar, and 3D geometries with shadowing

    SciTech Connect

    Shapiro, A.B.

    1983-08-01

    The computer code FACET calculates the radiation geometric view factor (alternatively called shape factor, angle factor, or configuration factor) between surfaces for axisymmetric, two-dimensional planar and three-dimensional geometries with interposed third surface obstructions. FACET was developed to calculate view factors for input to finite-element heat-transfer analysis codes. The first section of this report is a brief review of previous radiation-view-factor computer codes. The second section presents the defining integral equation for the geometric view factor between two surfaces and the assumptions made in its derivation. Also in this section are the numerical algorithms used to integrate this equation for the various geometries. The third section presents the algorithms used to detect self-shadowing and third-surface shadowing between the two surfaces for which a view factor is being calculated. The fourth section provides a user's input guide followed by several example problems.

  14. Recent advances in the Mercury Monte Carlo particle transport code

    SciTech Connect

    Brantley, P. S.; Dawson, S. A.; McKinley, M. S.; O'Brien, M. J.; Stevens, D. E.; Beck, B. R.; Jurgenson, E. D.; Ebbers, C. A.; Hall, J. M.

    2013-07-01

    We review recent physics and computational science advances in the Mercury Monte Carlo particle transport code under development at Lawrence Livermore National Laboratory. We describe recent efforts to enable a nuclear resonance fluorescence capability in the Mercury photon transport. We also describe recent work to implement a probability of extinction capability into Mercury. We review the results of current parallel scaling and threading efforts that enable the code to run on millions of MPI processes. (authors)

  15. Benchmarking NNWSI flow and transport codes: COVE 1 results

    SciTech Connect

    Hayden, N.K.

    1985-06-01

    The code verification (COVE) activity of the Nevada Nuclear Waste Storage Investigations (NNWSI) Project is the first step in certification of flow and transport codes used for NNWSI performance assessments of a geologic repository for disposing of high-level radioactive wastes. The goals of the COVE activity are (1) to demonstrate and compare the numerical accuracy and sensitivity of certain codes, (2) to identify and resolve problems in running typical NNWSI performance assessment calculations, and (3) to evaluate computer requirements for running the codes. This report describes the work done for COVE 1, the first step in benchmarking some of the codes. Isothermal calculations for the COVE 1 benchmarking have been completed using the hydrologic flow codes SAGUARO, TRUST, and GWVIP; the radionuclide transport codes FEMTRAN and TRUMP; and the coupled flow and transport code TRACR3D. This report presents the results of three cases of the benchmarking problem solved for COVE 1, a comparison of the results, questions raised regarding sensitivities to modeling techniques, and conclusions drawn regarding the status and numerical sensitivities of the codes. 30 refs.

  16. Simulation of decay heat removal by natural convection in a pool type fast reactor model-ramona-with coupled 1D/2D thermal hydraulic code system

    SciTech Connect

    Kasinathan, N.; Rajakumar, A.; Vaidyanathan, G.; Chetal, S.C.

    1995-09-01

    Post shutdown decay heat removal is an important safety requirement in any nuclear system. In order to improve the reliability of this function, Liquid metal (sodium) cooled fast breeder reactors (LMFBR) are equipped with redundant hot pool dipped immersion coolers connected to natural draught air cooled heat exchangers through intermediate sodium circuits. During decay heat removal, flow through the core, immersion cooler primary side and in the intermediate sodium circuits are also through natural convection. In order to establish the viability and validate computer codes used in making predictions, a 1:20 scale experimental model called RAMONA with water as coolant has been built and experimental simulation of decay heat removal situation has been performed at KfK Karlsruhe. Results of two such experiments have been compiled and published as benchmarks. This paper brings out the results of the numerical simulation of one of the benchmark case through a 1D/2D coupled code system, DHDYN-1D/THYC-2D and the salient features of the comparisons. Brief description of the formulations of the codes are also included.

  17. Benchmarking of Neutron Production of Heavy-Ion Transport Codes

    SciTech Connect

    Remec, Igor; Ronningen, Reginald M.; Heilbronn, Lawrence

    2012-01-01

    Accurate prediction of radiation fields generated by heavy ion interactions is important in medical applications, space missions, and in design and operation of rare isotope research facilities. In recent years, several well-established computer codes in widespread use for particle and radiation transport calculations have been equipped with the capability to simulate heavy ion transport and interactions. To assess and validate these capabilities, we performed simulations of a series of benchmark-quality heavy ion experiments with the computer codes FLUKA, MARS15, MCNPX, and PHITS. We focus on the comparisons of secondary neutron production. Results are encouraging; however, further improvements in models and codes and additional benchmarking are required.

  18. Bounce-averaged Fokker-Planck code for stellarator transport

    SciTech Connect

    Mynick, H.E.; Hitchon, W.N.G.

    1985-07-01

    A computer code for solving the bounce-averaged Fokker-Planck equation appropriate to stellarator transport has been developed, and its first applications made. The code is much faster than the bounce-averaged Monte-Carlo codes, which up to now have provided the most efficient numerical means for studying stellarator transport. Moreover, because the connection to analytic kinetic theory of the Fokker-Planck approach is more direct than for the Monte-Carlo approach, a comparison of theory and numerical experiment is now possible at a considerably more detailed level than previously.

  19. Magneto-transport characteristics of a 2D electron system driven to negative magneto-conductivity by microwave photoexcitation

    NASA Astrophysics Data System (ADS)

    Mani, Ramesh; Kriisa, A.

    2015-03-01

    Negative diagonal magneto-conductivity/resistivity is a spectacular- and thought provoking- property of driven, far-from-equilibrium, low dimensional electronic systems. The physical response of this exotic electronic state is not yet fully understood since it is rarely encountered in experiment. The microwave-radiation-induced zero-resistance state in the high mobility GaAs/AlGaAs 2D electron system is believed to be an example where negative magneto-conductivity/resistivity is responsible for the observed phenomena. Here, we examine the magneto-transport characteristics of this negative conductivity/resistivity state in the microwave photo-excited two-dimensional electron system (2DES) through a numerical solution of the associated boundary value problem. The results suggest, surprisingly, that a bare negative diagonal conductivity/resistivity state in the 2DES under photo-excitation should yield a positive diagonal resistance with a concomitant sign reversal in the Hall voltage. Transport measurements are supported by the DOE, Office of Basic Energy Sciences, Material Sciences and Engineering Division under DE-SC0001762. Additional support by the ARO under W911NF-07-01-015.

  20. Construction and Analysis of a Novel 2-D Optical Orthogonal Codes Based on Modified One-coincidence Sequence

    NASA Astrophysics Data System (ADS)

    Ji, Jianhua; Wang, Yanfen; Wang, Ke; Xu, Ming; Zhang, Zhipeng; Yang, Shuwen

    2013-09-01

    A new two-dimensional OOC (optical orthogonal codes) named PC/MOCS is constructed, using PC (prime code) for time spreading and MOCS (modified one-coincidence sequence) for wavelength hopping. Compared with PC/PC, the number of wavelengths for PC/MOCS is not limited to a prime number. Compared with PC/OCS, the length of MOCS need not be expanded to the same length of PC. PC/MOCS can be constructed flexibly, and also can use available wavelengths effectively. Theoretical analysis shows that PC/MOCS can reduce the bit error rate (BER) of OCDMA system, and can support more users than PC/PC and PC/OCS.

  1. TRAC code assessment using data from SCTF Core-III, a large-scale 2D/3D facility

    SciTech Connect

    Boyack, B.E.; Shire, P.R.; Harmony, S.C.; Rhee, G.

    1988-01-01

    Nine tests from the SCTF Core-III configuration have been analyzed using TRAC-PF1/MOD1. The objectives of these assessment activities were to obtain a better understanding of the phenomena occurring during the refill and reflood phases of a large-break loss-of-coolant accident, to determine the accuracy to which key parameters are calculated, and to identify deficiencies in key code correlations and models that provide closure for the differential equations defining thermal-hydraulic phenomena in pressurized water reactors. Overall, the agreement between calculated and measured values of peak cladding temperature is reasonable. In addition, TRAC adequately predicts many of the trends observed in both the integral effect and separate effect tests conducted in SCTF Core-III. The importance of assessment activities that consider potential contributors to discrepancies between the measured and calculated results arising from three sources are described as those related to (1) knowledge about the facility configuration and operation, (2) facility modeling for code input, and (3) deficiencies in code correlations and models. An example is provided. 8 refs., 7 figs., 2 tabs.

  2. ZORNOC: a 1 1/2-D tokamak data analysis code for studying noncircular high beta plasmas

    SciTech Connect

    Zurro, B.; Wieland, R.M.; Murakami, M.; Swain, D.W.

    1980-03-01

    A new tokamak data analysis code, ZORNOC, was developed to study noncircular, high beta plasmas in the Impurity Study Experiment (ISX-B). These plasmas exhibit significant flux surface shifts and elongation in both ohmically heated and beam-heated discharges. The MHD equilibrium flux surface geometry is determined by solving the Grad-Shafranov equation based on: (1) the shape of the outermost flux surface, deduced from the magnetic loop probes; (2) a pressure profile, deduced by means of Thomson scattering data (electrons), charge exchange data (ions), and a Fokker-Planck model (fast ions); and (3) a safety factor profile, determined from the experimental data using a simple model (Z/sub eff/ = const) that is self-consistently altered while the plasma equilibrium is iterated. For beam-heated discharches the beam deposition profile is determined by means of a Monte Carlo scheme and the slowing down of the fast ions by means of an analytical solution of the Fokker-Planck equation. The code also carries out an electron power balance and calculates various confinement parameters. The code is described and examples of its operation are given.

  3. PM2D code simulation of electronic dynamics and electro-magnetic fields generation by ultra-short laser pulses interaction with matter

    SciTech Connect

    Litvinenko, I. A.; Lykov, V. A.

    1997-04-15

    The results of numerical simulation of fast electrons motion and generated electro-magnetic fields at the picosecond pulse laser interaction with flat target are presented. The calculations were performed with PM2D code, where relativistic equation of electron motion joint with Maxwell equations is solved by particle method in cells. The efficiency of fast electrons energy conversion to the transverse electromagnetic wave of picosecond duration can reach the value 10{sup -4} for the intensity of ultrashort laser pulse at the target 10{sup 16}-10{sup 17} W/cm{sup 2}.

  4. Non-equilibrium partitioning tracer transport in porous media: 2-D physical modelling and imaging using a partitioning fluorescent dye.

    PubMed

    Jones, Edward H; Smith, Colin C

    2005-12-01

    This paper describes an investigation into non-equilibrium partitioning tracer transport and interaction with non-aqueous-phase liquid (NAPL) contaminated water-saturated porous media using a two-dimensional (2-D) physical modelling methodology. A fluorescent partitioning tracer is employed within a transparent porous model which when imaged by a CCD digital camera can provide full spatial tracer concentrations and tracer breakthrough curves. Quasi one-dimensional (1-D) benchmarking tests in models packed with various combinations of clean quartz sand and NAPL are described. These modelled residual NAPL saturations, S(n), of 0-15%. Results demonstrated that the fluorescent partitioning tracer was able to detect and quantify the presence of NAPL at low flow rates. At larger flow rates and/or higher NAPL saturations, the tracer increasingly underpredicted the NAPL volume as expected and this is attributed primarily to non-equilibrium partitioning. Despite little change in permeability, change in NAPL saturations from 4% to 8% resulted in significant NAPL saturation underestimates at the same flow rates implying coalescence of NAPL into wider separated but larger ganglia. A 2-D investigation of an idealised heterogeneous residual NAPL contaminated flow field indicated little permeability change in the NAPL contaminated zone and thus little flow bypassing, leading to reduced underpredictions of NAPL saturations than for equivalent quasi 1-D cases. This was attributed to increased 'sampling' of the NAPL by the tracer. The process is clearly visually identifiable from the experimental images. This rapid and relatively inexpensive experimental method is of value in laboratory studies of partitioning tracer behaviour in porous media; in particular, the ability to observe full field concentrations makes it valuable for the study of complex heterogeneous systems. PMID:16298415

  5. Current status of the PSG Monte Carlo neutron transport code

    SciTech Connect

    Leppaenen, J.

    2006-07-01

    PSG is a new Monte Carlo neutron transport code, developed at the Technical Research Centre of Finland (VTT). The code is mainly intended for fuel assembly-level reactor physics calculations, such as group constant generation for deterministic reactor simulator codes. This paper presents the current status of the project and the essential capabilities of the code. Although the main application of PSG is in lattice calculations, the geometry is not restricted in two dimensions. This paper presents the validation of PSG against the experimental results of the three-dimensional MOX fuelled VENUS-2 reactor dosimetry benchmark. (authors)

  6. Transport Code for Regular Triangular Geometry

    1993-06-09

    DIAMANT2 solves the two-dimensional static multigroup neutron transport equation in planar regular triangular geometry. Both regular and adjoint, inhomogeneous and homogeneous problems subject to vacuum, reflective or input specified boundary flux conditions are solved. Anisotropy is allowed for the scattering source. Volume and surface sources are allowed for inhomogeneous problems.

  7. Optimized Purification of a Heterodimeric ABC Transporter in a Highly Stable Form Amenable to 2-D Crystallization

    PubMed Central

    Galián, Carmen; Manon, Florence; Dezi, Manuela; Torres, Cristina; Ebel, Christine; Lévy, Daniel; Jault, Jean-Michel

    2011-01-01

    Optimized protocols for achieving high-yield expression, purification and reconstitution of membrane proteins are required to study their structure and function. We previously reported high-level expression in Escherichia coli of active BmrC and BmrD proteins from Bacillus subtilis, previously named YheI and YheH. These proteins are half-transporters which belong to the ABC (ATP-Binding Cassette) superfamily and associate in vivo to form a functional transporter able to efflux drugs. In this report, high-yield purification and functional reconstitution were achieved for the heterodimer BmrC/BmrD. In contrast to other detergents more efficient for solubilizing the transporter, dodecyl-ß-D-maltoside (DDM) maintained it in a drug-sensitive and vanadate-sensitive ATPase-competent state after purification by affinity chromatography. High amounts of pure proteins were obtained which were shown either by analytical ultracentrifugation or gel filtration to form a monodisperse heterodimer in solution, which was notably stable for more than one month at 4°C. Functional reconstitution using different lipid compositions induced an 8-fold increase of the ATPase activity (kcat∼5 s−1). We further validated that the quality of the purified BmrC/BmrD heterodimer is suitable for structural analyses, as its reconstitution at high protein densities led to the formation of 2-D crystals. Electron microscopy of negatively stained crystals allowed the calculation of a projection map at 20 Å resolution revealing that BmrC/BmrD might assemble into oligomers in a lipidic environment. PMID:21602923

  8. Optimized purification of a heterodimeric ABC transporter in a highly stable form amenable to 2-D crystallization.

    PubMed

    Galián, Carmen; Manon, Florence; Dezi, Manuela; Torres, Cristina; Ebel, Christine; Lévy, Daniel; Jault, Jean-Michel

    2011-01-01

    Optimized protocols for achieving high-yield expression, purification and reconstitution of membrane proteins are required to study their structure and function. We previously reported high-level expression in Escherichia coli of active BmrC and BmrD proteins from Bacillus subtilis, previously named YheI and YheH. These proteins are half-transporters which belong to the ABC (ATP-Binding Cassette) superfamily and associate in vivo to form a functional transporter able to efflux drugs. In this report, high-yield purification and functional reconstitution were achieved for the heterodimer BmrC/BmrD. In contrast to other detergents more efficient for solubilizing the transporter, dodecyl-ß-D-maltoside (DDM) maintained it in a drug-sensitive and vanadate-sensitive ATPase-competent state after purification by affinity chromatography. High amounts of pure proteins were obtained which were shown either by analytical ultracentrifugation or gel filtration to form a monodisperse heterodimer in solution, which was notably stable for more than one month at 4°C. Functional reconstitution using different lipid compositions induced an 8-fold increase of the ATPase activity (k(cat)∼5 s(-1)). We further validated that the quality of the purified BmrC/BmrD heterodimer is suitable for structural analyses, as its reconstitution at high protein densities led to the formation of 2-D crystals. Electron microscopy of negatively stained crystals allowed the calculation of a projection map at 20 Å resolution revealing that BmrC/BmrD might assemble into oligomers in a lipidic environment. PMID:21602923

  9. Flow and Containment Transport Code for Modeling Variably Saturated Porous Media

    1998-05-14

    FACT is a finite element based code designed to model subsurface flow and contaminant transport. It was designed to perform transient three-dimensional calculations that simulate isothermal groundwater flow, moisture movement, and solute transport in variably saturated and fully saturated subsurface porous media. The code is designed specifically to handle complex multi-layer and/or heterogenous aquifer systems in an efficient manner and accommodates a wide range of boundary conditions. Additionally 1-D and 2-D (in Cartesian coordinates) problemsmore » are handled in FACT by simply limiting the number of elements in a particular direction(s) to one. The governing equations in FACT are formulated only in Cartesian coordinates. FACT writes out both ascii and graphical binary files that are TECPLOT-ready. Special features are also available within FACT for handling the typical groundwater modeling needs for remediation efforts at the Savannah River Site.« less

  10. Excessive fructose intake causes 1,25-(OH)2D3-dependent inhibition of intestinal and renal calcium transport in growing rats

    PubMed Central

    Douard, Veronique; Sabbagh, Yves; Lee, Jacklyn; Patel, Chirag; Kemp, Francis W.; Bogden, John D.; Lin, Sheldon

    2013-01-01

    We recently discovered that chronic high fructose intake by lactating rats prevented adaptive increases in rates of active intestinal Ca2+ transport and in levels of 1,25-(OH)2D3, the active form of vitamin D. Since sufficient Ca2+ absorption is essential for skeletal growth, our discovery may explain findings that excessive consumption of sweeteners compromises bone integrity in children. We tested the hypothesis that 1,25-(OH)2D3 mediates the inhibitory effect of excessive fructose intake on active Ca2+ transport. First, compared with those fed glucose or starch, growing rats fed fructose for 4 wk had a marked reduction in intestinal Ca2+ transport rate as well as in expression of intestinal and renal Ca2+ transporters that was tightly associated with decreases in circulating levels of 1,25-(OH)2D3, bone length, and total bone ash weight but not with serum parathyroid hormone (PTH). Dietary fructose increased the expression of 24-hydroxylase (CYP24A1) and decreased that of 1α-hydroxylase (CYP27B1), suggesting that fructose might enhance the renal catabolism and impair the synthesis, respectively, of 1,25-(OH)2D3. Serum FGF23, which is secreted by osteocytes and inhibits CYP27B1 expression, was upregulated, suggesting a potential role of bone in mediating the fructose effects on 1,25-(OH)2D3 synthesis. Second, 1,25-(OH)2D3 treatment rescued the fructose effect and normalized intestinal and renal Ca2+ transporter expression. The mechanism underlying the deleterious effect of excessive fructose intake on intestinal and renal Ca2+ transporters is a reduction in serum levels of 1,25-(OH)2D3. This finding is significant because of the large amounts of fructose now consumed by Americans increasingly vulnerable to Ca2+ and vitamin D deficiency. PMID:23571713

  11. DETERMINISTIC TRANSPORT METHODS AND CODES AT LOS ALAMOS

    SciTech Connect

    J. E. MOREL

    1999-06-01

    The purposes of this paper are to: Present a brief history of deterministic transport methods development at Los Alamos National Laboratory from the 1950's to the present; Discuss the current status and capabilities of deterministic transport codes at Los Alamos; and Discuss future transport needs and possible future research directions. Our discussion of methods research necessarily includes only a small fraction of the total research actually done. The works that have been included represent a very subjective choice on the part of the author that was strongly influenced by his personal knowledge and experience. The remainder of this paper is organized in four sections: the first relates to deterministic methods research performed at Los Alamos, the second relates to production codes developed at Los Alamos, the third relates to the current status of transport codes at Los Alamos, and the fourth relates to future research directions at Los Alamos.

  12. HT2DINV: A 2D forward and inverse code for steady-state and transient hydraulic tomography problems

    NASA Astrophysics Data System (ADS)

    Soueid Ahmed, A.; Jardani, A.; Revil, A.; Dupont, J. P.

    2015-12-01

    Hydraulic tomography is a technique used to characterize the spatial heterogeneities of storativity and transmissivity fields. The responses of an aquifer to a source of hydraulic stimulations are used to recover the features of the estimated fields using inverse techniques. We developed a 2D free source Matlab package for performing hydraulic tomography analysis in steady state and transient regimes. The package uses the finite elements method to solve the ground water flow equation for simple or complex geometries accounting for the anisotropy of the material properties. The inverse problem is based on implementing the geostatistical quasi-linear approach of Kitanidis combined with the adjoint-state method to compute the required sensitivity matrices. For undetermined inverse problems, the adjoint-state method provides a faster and more accurate approach for the evaluation of sensitivity matrices compared with the finite differences method. Our methodology is organized in a way that permits the end-user to activate parallel computing in order to reduce the computational burden. Three case studies are investigated demonstrating the robustness and efficiency of our approach for inverting hydraulic parameters.

  13. Modeling of Anomalous Transport in Tokamaks with FACETS code

    NASA Astrophysics Data System (ADS)

    Pankin, A. Y.; Batemann, G.; Kritz, A.; Rafiq, T.; Vadlamani, S.; Hakim, A.; Kruger, S.; Miah, M.; Rognlien, T.

    2009-05-01

    The FACETS code, a whole-device integrated modeling code that self-consistently computes plasma profiles for the plasma core and edge in tokamaks, has been recently developed as a part of the SciDAC project for core-edge simulations. A choice of transport models is available in FACETS through the FMCFM interface [1]. Transport models included in FMCFM have specific ranges of applicability, which can limit their use to parts of the plasma. In particular, the GLF23 transport model does not include the resistive ballooning effects that can be important in the tokamak pedestal region and GLF23 typically under-predicts the anomalous fluxes near the magnetic axis [2]. The TGLF and GYRO transport models have similar limitations [3]. A combination of transport models that covers the entire discharge domain is studied using FACETS in a realistic tokamak geometry. Effective diffusivities computed with the FMCFM transport models are extended to the region near the separatrix to be used in the UEDGE code within FACETS. 1. S. Vadlamani et al. (2009) %First time-dependent transport simulations using GYRO and NCLASS within FACETS (this meeting).2. T. Rafiq et al. (2009) %Simulation of electron thermal transport in H-mode discharges Submitted to Phys. Plasmas.3. C. Holland et al. (2008) %Validation of gyrokinetic transport simulations using %DIII-D core turbulence measurements Proc. of IAEA FEC (Switzerland, 2008)

  14. A New Cell-Centered Implicit Numerical Scheme for Ions in the 2-D Axisymmetric Code Hall2de

    NASA Technical Reports Server (NTRS)

    Lopez Ortega, Alejandro; Mikellides, Ioannis G.

    2014-01-01

    We present a new algorithm in the Hall2De code to simulate the ion hydrodynamics in the acceleration channel and near plume regions of Hall-effect thrusters. This implementation constitutes an upgrade of the capabilities built in the Hall2De code. The equations of mass conservation and momentum for unmagnetized ions are solved using a conservative, finite-volume, cell-centered scheme on a magnetic-field-aligned grid. Major computational savings are achieved by making use of an implicit predictor/multi-corrector algorithm for time evolution. Inaccuracies in the prediction of the motion of low-energy ions in the near plume in hydrodynamics approaches are addressed by implementing a multi-fluid algorithm that tracks ions of different energies separately. A wide range of comparisons with measurements are performed to validate the new ion algorithms. Several numerical experiments with the location and value of the anomalous collision frequency are also presented. Differences in the plasma properties in the near-plume between the single fluid and multi-fluid approaches are discussed. We complete our validation by comparing predicted erosion rates at the channel walls of the thruster with measurements. Erosion rates predicted by the plasma properties obtained from simulations replicate accurately measured rates of erosion within the uncertainty range of the sputtering models employed.

  15. Radiation transport phenomena and modeling - part A: Codes

    SciTech Connect

    Lorence, L.J.

    1997-06-01

    The need to understand how particle radiation (high-energy photons and electrons) from a variety of sources affects materials and electronics has motivated the development of sophisticated computer codes that describe how radiation with energies from 1.0 keV to 100.0 GeV propagates through matter. Predicting radiation transport is the necessary first step in predicting radiation effects. The radiation transport codes that are described here are general-purpose codes capable of analyzing a variety of radiation environments including those produced by nuclear weapons (x-rays, gamma rays, and neutrons), by sources in space (electrons and ions) and by accelerators (x-rays, gamma rays, and electrons). Applications of these codes include the study of radiation effects on electronics, nuclear medicine (imaging and cancer treatment), and industrial processes (food disinfestation, waste sterilization, manufacturing.) The primary focus will be on coupled electron-photon transport codes, with some brief discussion of proton transport. These codes model a radiation cascade in which electrons produce photons and vice versa. This coupling between particles of different types is important for radiation effects. For instance, in an x-ray environment, electrons are produced that drive the response in electronics. In an electron environment, dose due to bremsstrahlung photons can be significant once the source electrons have been stopped.

  16. MORSE Monte Carlo radiation transport code system

    SciTech Connect

    Emmett, M.B.

    1983-02-01

    This report is an addendum to the MORSE report, ORNL-4972, originally published in 1975. This addendum contains descriptions of several modifications to the MORSE Monte Carlo Code, replacement pages containing corrections, Part II of the report which was previously unpublished, and a new Table of Contents. The modifications include a Klein Nishina estimator for gamma rays. Use of such an estimator required changing the cross section routines to process pair production and Compton scattering cross sections directly from ENDF tapes and writing a new version of subroutine RELCOL. Another modification is the use of free form input for the SAMBO analysis data. This required changing subroutines SCORIN and adding new subroutine RFRE. References are updated, and errors in the original report have been corrected. (WHK)

  17. Monte-Carlo Impurity transport simulations in the edge of the DIII-D tokamak using the MCI code

    SciTech Connect

    Evans, T.E.; Mahdavi, M.A.; Sager, G.T.; West, W.P.; Fenstermacher, M.E.; Meyer, W.H.; Porter, G.D.

    1995-07-01

    A Monte-Carlo Impurity (MCI) transport code is used to follow trace impurities through multiple ionization states in realistic 2-D tokamak geometries. The MCI code is used to study impurity transport along the open magnetic field lines of the Scrape-off Layer (SOL) and to understand how impurities get into the core from the SOL. An MCI study concentrating on the entrainment of carbon impurities ions by deuterium background plasma into the DIII-D divertor is discussed. MCI simulation results are compared to experimental DIII-D carbon measurements.

  18. SCTP as scalable video coding transport

    NASA Astrophysics Data System (ADS)

    Ortiz, Jordi; Graciá, Eduardo Martínez; Skarmeta, Antonio F.

    2013-12-01

    This study presents an evaluation of the Stream Transmission Control Protocol (SCTP) for the transport of the scalable video codec (SVC), proposed by MPEG as an extension to H.264/AVC. Both technologies fit together properly. On the one hand, SVC permits to split easily the bitstream into substreams carrying different video layers, each with different importance for the reconstruction of the complete video sequence at the receiver end. On the other hand, SCTP includes features, such as the multi-streaming and multi-homing capabilities, that permit to transport robustly and efficiently the SVC layers. Several transmission strategies supported on baseline SCTP and its concurrent multipath transfer (CMT) extension are compared with the classical solutions based on the Transmission Control Protocol (TCP) and the Realtime Transmission Protocol (RTP). Using ns-2 simulations, it is shown that CMT-SCTP outperforms TCP and RTP in error-prone networking environments. The comparison is established according to several performance measurements, including delay, throughput, packet loss, and peak signal-to-noise ratio of the received video.

  19. Overview of development and design of MPACT: Michigan parallel characteristics transport code

    SciTech Connect

    Kochunas, B.; Collins, B.; Jabaay, D.; Downar, T. J.; Martin, W. R.

    2013-07-01

    MPACT (Michigan Parallel Characteristics Transport Code) is a new reactor analysis tool. It is being developed by students and research staff at the University of Michigan to be used for an advanced pin-resolved transport capability within VERA (Virtual Environment for Reactor Analysis). VERA is the end-user reactor simulation tool being produced by the Consortium for the Advanced Simulation of Light Water Reactors (CASL). The MPACT development project is itself unique for the way it is changing how students do research to achieve the instructional and research goals of an academic institution, while providing immediate value to industry. The MPACT code makes use of modern lean/agile software processes and extensive testing to maintain a level of productivity and quality required by CASL. MPACT's design relies heavily on object-oriented programming concepts and design patterns and is programmed in Fortran 2003. These designs are explained and illustrated as to how they can be readily extended to incorporate new capabilities and research ideas in support of academic research objectives. The transport methods currently implemented in MPACT include the 2-D and 3-D method of characteristics (MOC) and 2-D and 3-D method of collision direction probabilities (CDP). For the cross section resonance treatment, presently the subgroup method and the new embedded self-shielding method (ESSM) are implemented within MPACT. (authors)

  20. A MARS-based method for estimating regional 2-D ionospheric VTEC and receiver differential code bias

    NASA Astrophysics Data System (ADS)

    Kao, Szu-Pyng; Chen, Yao-Chung; Ning, Fang-Shii

    2014-01-01

    The geometry-free linear combination of dual-frequency GNSS reference station ground observations are currently used to build the Vertical Total Electron Content (VTEC) model of the ionosphere. As it is known, besides ionospheric delays, there are differential code bias (DCB) of satellite (SDCB) and receiver (RDCB) in the geometry-free observation equation. The SDCB can be obtained using the International GNSS Service (IGS) analysis centers, but the RDCB for regional and local network receivers are not provided. Therefore, estimating the RDCB and VTEC model accurately and simultaneously is a critical factor investigated by researchers. This study uses Multivariate Adaptive Regression Splines (MARS) to estimate the VTEC approximate model and then substitutes this model in the observation equation to form the normal equation. The least squares method is used to solve the RDCB and VTEC model together. The research findings show that this method has good modeling effectiveness and the estimated RDCB has good reliability. The estimated VTEC model applied to GPS single-frequency precise point positioning has better positioning accuracy in comparison to the IGS global ionosphere map (GIM).

  1. Update on the Development and Validation of MERCURY: A Modern, Monte Carlo Particle Transport Code

    SciTech Connect

    Procassini, R J; Taylor, J M; McKinley, M S; Greenman, G M; Cullen, D E; O'Brien, M J; Beck, B R; Hagmann, C A

    2005-06-06

    An update on the development and validation of the MERCURY Monte Carlo particle transport code is presented. MERCURY is a modern, parallel, general-purpose Monte Carlo code being developed at the Lawrence Livermore National Laboratory. During the past year, several major algorithm enhancements have been completed. These include the addition of particle trackers for 3-D combinatorial geometry (CG), 1-D radial meshes, 2-D quadrilateral unstructured meshes, as well as a feature known as templates for defining recursive, repeated structures in CG. New physics capabilities include an elastic-scattering neutron thermalization model, support for continuous energy cross sections and S ({alpha}, {beta}) molecular bound scattering. Each of these new physics features has been validated through code-to-code comparisons with another Monte Carlo transport code. Several important computer science features have been developed, including an extensible input-parameter parser based upon the XML data description language, and a dynamic load-balance methodology for efficient parallel calculations. This paper discusses the recent work in each of these areas, and describes a plan for future extensions that are required to meet the needs of our ever expanding user base.

  2. Multidimensional electron-photon transport with standard discrete ordinates codes

    SciTech Connect

    Drumm, C.R.

    1995-12-31

    A method is described for generating electron cross sections that are compatible with standard discrete ordinates codes without modification. There are many advantages of using an established discrete ordinates solver, e.g. immediately available adjoint capability. Coupled electron-photon transport capability is needed for many applications, including the modeling of the response of electronics components to space and man-made radiation environments. The cross sections have been successfully used in the DORT, TWODANT and TORT discrete ordinates codes. The cross sections are shown to provide accurate and efficient solutions to certain multidimensional electronphoton transport problems.

  3. RADTRAN 5: A computer code for transportation risk analysis

    SciTech Connect

    Neuhauser, K. S.; Kanipe, F. L.

    1991-01-01

    RADTRAN 5 is a computer code developed at Sandia National Laboratories (SNL) in Albuquerque, NM, to estimate radiological and nonradiological risks of radioactive materials transportation. RADTRAN 5 is written in ANSI Standard FORTRAN 77 and contains significant advances in the methodology for route-specific analysis first developed by SNL for RADTRAN 4 (Neuhauser and Kanipe, 1992). Like the previous RADTRAN codes, RADTRAN 5 contains two major modules for incident-free and accident risk amlysis, respectively. All commercially important transportation modes may be analyzed with RADTRAN 5: highway by combination truck; highway by light-duty vehicle; rail; barge; ocean-going ship; cargo air; and passenger air.

  4. Validation of a coupled reactive transport code in porous media

    NASA Astrophysics Data System (ADS)

    Mugler, C.; Montarnal, P.; Dimier, A.

    2003-04-01

    The safety assessment of nuclear waste disposals needs to predict the migration of radionuclides and chemical species through a geological medium. It is therefore necessary to develop and assess qualified and validated tools which integrate both the transport mechanisms through the geological media and the chemical mechanisms governing the mobility of radionuclides. In this problem, both geochemical and hydrodynamic phenomena are tightly linked together. That is the reason why the French Nuclear Energy Agency (CEA) and the French Agency for the Management of Radioactive Wastes (ANDRA) are conjointly developping a coupled reactive transport code that solves simultaneously a geochemical model and a transport model. This code, which is part of the software project ALLIANCES, leans on the libraries of two geochemical codes solving the complex ensemble of reacting chemical species: CHESS and PHREEQC. Geochemical processes considered here include ion exchange, redox reactions, acid-base reactions, surface complexation and mineral dissolution and/or precipitation. Transport is simulated using the mixed-hybrid finite element scheme CAST3M or the finite volume scheme MT3D. All together solve Darcy's law and simulate several hydrological processes such as advection, diffusion and dispersion. The coupling algorithm is an iterative sequential algorithm. Several analytical test cases have been defined and used to validate the reactive transport code. Numerical results can be compared to analytical solutions.

  5. Vlasov simulation of 2D Modulational Instability of Ion Acoustic Waves and Prospects for Modeling such instabilities in Laser Propagation Codes

    NASA Astrophysics Data System (ADS)

    Berger, Richard; Chapman, T.; Banks, J. W.; Brunner, S.

    2015-11-01

    We present 2D+2V Vlasov simulations of Ion Acoustic waves (IAWs) driven by an external traveling-wave potential, ϕ0 (x , t) , with frequency, ω, and wavenumber, k, obeying the kinetic dispersion relation. Both electrons and ions are treated kinetically. Simulations with ϕ0 (x , t) , localized transverse to the propagation direction, model IAWs driven in a laser speckle. The waves bow with a positive or negative curvature of the wave fronts that depends on the sign of the nonlinear frequency shift ΔωNL , which is in turn determined by the magnitude of ZTe /Ti where Z is the charge state and Te , i is the electron, ion temperature. These kinetic effects result can cause modulational and self-focusing instabilities that transfer wave energy to kinetic energy. Linear dispersion properties of IAWs are used in laser propagation codes that predict the amount of light reflected by stimulated Brillouin scattering. At high enough amplitudes, the linear dispersion is invalid and these kinetic effects should be incorporated. Including the spatial and time scales of these instabilities is computationally prohibitive. We report progress including kinetic models in laser propagation codes. This work was performed under the auspices of the U.S. Department of Energy by Lawrence Livermore National Laboratory under Contract No. DE-AC52-07NA27344 and funded by the Laboratory Research and Development Program at LLNL under project tracking code 15.

  6. Hepcidin and 1,25(OH)2D3 effectively restore Ca2+ transport in β-thalassemic mice: reciprocal phenomenon of Fe2+ and Ca2+ absorption.

    PubMed

    Kraidith, Kamonshanok; Svasti, Saovaros; Teerapornpuntakit, Jarinthorn; Vadolas, Jim; Chaimana, Rattana; Lapmanee, Sarawut; Suntornsaratoon, Panan; Krishnamra, Nateetip; Fucharoen, Suthat; Charoenphandhu, Narattaphol

    2016-07-01

    Previously, β-thalassemia, an inherited anemic disorder with iron overload caused by loss-of-function mutation of β-globin gene, has been reported to induce osteopenia and impaired whole body calcium metabolism, but the pathogenesis of aberrant calcium homeostasis remains elusive. Herein, we investigated how β-thalassemia impaired intestinal calcium absorption and whether it could be restored by administration of 1,25-dihydroxyvitamin D3 [1,25(OH)2D3] or hepcidin, the latter of which was the liver-derived antagonist of intestinal iron absorption. The results showed that, in hemizygous β-globin knockout (BKO) mice, the duodenal calcium transport was lower than that in wild-type littermates, and severity was especially pronounced in female mice. Both active and passive duodenal calcium fluxes in BKO mice were found to be less than those in normal mice. This impaired calcium transport could be restored by 7-day 1,25(OH)2D3 treatment. The 1,25(OH)2D3-induced calcium transport was diminished by inhibitors of calcium transporters, e.g., L-type calcium channel, NCX1, and PMCA1b, as well as vesicular transport inhibitors. Interestingly, the duodenal calcium transport exhibited an inverse correlation with transepithelial iron transport, which was markedly enhanced in thalassemic mice. Thus, 3-day subcutaneous hepcidin injection and acute direct hepcidin exposure in the Ussing chamber were capable of restoring the thalassemia-associated impairment of calcium transport; however, the positive effect of hepcidin on calcium transport was completely blocked by proteasome inhibitors MG132 and bortezomib. In conclusion, both 1,25(OH)2D3 and hepcidin could be used to alleviate the β-thalassemia-associated impairment of calcium absorption. Therefore, our study has shed light on the development of a treatment strategy to rescue calcium dysregulation in β-thalassemia. PMID:27245334

  7. Improved robustness study of a shock ignited target, with DUED code including non-local electron transport and 3D laser ray-tracing

    NASA Astrophysics Data System (ADS)

    Atzeni, Stefano; Marocchino, Alberto; Schiavi, Angelo

    2016-03-01

    Accurate descriptions of laser power coupling to the plasma and electron energy transport are crucial for designing shock-ignition targets and assessing their robustness (in particular with regard to laser and positioning errors). To this purpose, the 2D DUED laser fusion code has been improved with the inclusion of a 3D laser ray-tracing scheme and a model for non-local electron transport. 2D simulations with the upgraded code are presented; the dependence of the fusion yield vs target displacement is studied. Two different irradiation configurations are considered.

  8. Differential Cross Section Kinematics for 3-dimensional Transport Codes

    NASA Technical Reports Server (NTRS)

    Norbury, John W.; Dick, Frank

    2008-01-01

    In support of the development of 3-dimensional transport codes, this paper derives the relevant relativistic particle kinematic theory. Formulas are given for invariant, spectral and angular distributions in both the lab (spacecraft) and center of momentum frames, for collisions involving 2, 3 and n - body final states.

  9. The EGS4 Code System: Solution of Gamma-ray and Electron Transport Problems

    DOE R&D Accomplishments Database

    Nelson, W. R.; Namito, Yoshihito

    1990-03-01

    In this paper we present an overview of the EGS4 Code System -- a general purpose package for the Monte Carlo simulation of the transport of electrons and photons. During the last 10-15 years EGS has been widely used to design accelerators and detectors for high-energy physics. More recently the code has been found to be of tremendous use in medical radiation physics and dosimetry. The problem-solving capabilities of EGS4 will be demonstrated by means of a variety of practical examples. To facilitate this review, we will take advantage of a new add-on package, called SHOWGRAF, to display particle trajectories in complicated geometries. These are shown as 2-D laser pictures in the written paper and as photographic slides of a 3-D high-resolution color monitor during the oral presentation. 11 refs., 15 figs.

  10. The EGS4 Code System: Solution of gamma-ray and electron transport problems

    SciTech Connect

    Nelson, W.R.; Namito, Yoshihito.

    1990-02-09

    In this paper we present an overview of the EGS4 Code System -- a general purpose package for the Monte Carlo simulation of the transport of electrons and photons. During the last 10-15 years EGS has been widely used to design accelerators and detectors for high-energy physics. More recently the code has been found to be of tremendous use in medical radiation physics and dosimetry. The problem-solving capabilities of EGS4 will be demonstrated by means of a variety of practical examples. To facilitate this review, we will take advantage of a new add-on package, called SHOWGRAF, to display particle trajectories in complicated geometries. These are shown as 2-D laser pictures in the written paper and as photographic slides of a 3-D high-resolution color monitor during the oral presentation. 11 refs., 15 figs.

  11. Description of transport codes for space radiation shielding.

    PubMed

    Kim, Myung-Hee Y; Wilson, John W; Cucinotta, Francis A

    2012-11-01

    Exposure to ionizing radiation in the space environment is one of the hazards faced by crews in space missions. As space radiations traverse spacecraft, habitat shielding, or tissues, their energies and compositions are altered by interactions with the shielding. Modifications to the radiation fields arise from atomic interactions of charged particles with orbital electrons and nuclear interactions leading to projectile and target fragmentation, including secondary particles such as neutrons, protons, mesons, and nuclear recoils. The transport of space radiation through shielding can be simulated using Monte Carlo techniques or deterministic solutions of the Boltzmann equation. To determine shielding requirements and to resolve radiation constraints for future human missions, the shielding evaluation of a spacecraft concept is required as an early step in the design process. To do this requires (1) accurate knowledge of space environmental models to define the boundary condition for transport calculations, (2) transport codes with detailed shielding and body geometry models to determine particle transmission into areas of internal shielding and at each critical body organ, and (3) the assessment of organ dosimetric quantities and biological risks by applying the corresponding response models for space radiation against the particle spectra that have been accurately determined from the transport code. This paper reviews current transport codes and analyzes their accuracy through comparison to laboratory and spaceflight data. This paper also introduces a probabilistic risk assessment approach for the evaluation of radiation shielding. PMID:23032892

  12. Aniso2D

    2005-07-01

    Aniso2d is a two-dimensional seismic forward modeling code. The earth is parameterized by an X-Z plane in which the seismic properties Can have monoclinic with x-z plane symmetry. The program uses a user define time-domain wavelet to produce synthetic seismograms anrwhere within the two-dimensional media.

  13. Boltzmann Transport Code Update: Parallelization and Integrated Design Updates

    NASA Technical Reports Server (NTRS)

    Heinbockel, J. H.; Nealy, J. E.; DeAngelis, G.; Feldman, G. A.; Chokshi, S.

    2003-01-01

    The on going efforts at developing a web site for radiation analysis is expected to result in an increased usage of the High Charge and Energy Transport Code HZETRN. It would be nice to be able to do the requested calculations quickly and efficiently. Therefore the question arose, "Could the implementation of parallel processing speed up the calculations required?" To answer this question two modifications of the HZETRN computer code were created. The first modification selected the shield material of Al(2219) , then polyethylene and then Al(2219). The modified Fortran code was labeled 1SSTRN.F. The second modification considered the shield material of CO2 and Martian regolith. This modified Fortran code was labeled MARSTRN.F.

  14. Colloid transport code-nuclear user`s manual

    SciTech Connect

    Jain, R.

    1992-04-03

    This report describes the CTCN computer code, designed to solve the equations of transient colloidal transport of radionuclides in porous and fractured media. This Fortran 77 package solves systems of coupled nonlinear differential equations with a wide range of boundary conditions. The package uses the Method of Lines technique with a special section which forms finite-difference discretizations in up to four spatial dimensions to automatically convert the system into a set of ordinary differential equations. The CTCN code then solves these equations using a robust, efficient ODE solver. Thus CTCN can be used to solve population balance equations along with the usual transport equations to model colloid transport processes or as a general problem solver to treat up to four-dimensional differential systems.

  15. NERO- a post-maximum supernova radiation transport code

    NASA Astrophysics Data System (ADS)

    Maurer, I.; Jerkstrand, A.; Mazzali, P. A.; Taubenberger, S.; Hachinger, S.; Kromer, M.; Sim, S.; Hillebrandt, W.

    2011-12-01

    The interpretation of supernova (SN) spectra is essential for deriving SN ejecta properties such as density and composition, which in turn can tell us about their progenitors and the explosion mechanism. A very large number of atomic processes are important for spectrum formation. Several tools for calculating SN spectra exist, but they mainly focus on the very early or late epochs. The intermediate phase, which requires a non-local thermodynamic equilibrium (NLTE) treatment of radiation transport has rarely been studied. In this paper, we present a new SN radiation transport code, NERO, which can look at those epochs. All the atomic processes are treated in full NLTE, under a steady-state assumption. This is a valid approach between roughly 50 and 500 days after the explosion depending on SN type. This covers the post-maximum photospheric and the early and the intermediate nebular phase. As a test, we compare NERO to the radiation transport code of Jerkstrand, Fransson & Kozma and to the nebular code of Mazzali et al. All three codes have been developed independently and a comparison provides a valuable opportunity to investigate their reliability. Currently, NERO is one-dimensional and can be used for predicting spectra of synthetic explosion models or for deriving SN properties by spectral modelling. To demonstrate this, we study the spectra of the 'normal' Type Ia supernova (SN Ia) 2005cf between 50 and 350 days after the explosion and identify most of the common SN Ia line features at post-maximum epochs.

  16. Code System to Calculate Waste-Isolation Flow and Transport.

    2001-01-26

    Version 00 Distribution is restricted to the United States Only. SWIFT2 (Sandia Waste Isolation Flow and Transport) is a fully transient, three-dimensional code that solves the coupled equations for transport in geologic media. The processes considered are fluid flow, heat transport, brine migration, and radionuclide-chain transport. Flow, heat and brine transport are coupled via fluid density, fluid viscosity, and porosity. Together they provide the velocity field on which the radionuclide transport depends. Both porous andmore » fractured media are considered. SWIFT2 was developed for use in the analysis of deep geologic nuclear waste-disposal facilities. However, it may be used in other areas such as waste injection into saline aquifers and heat storage in aquifers. Both dual-porosity and discrete-fracture conceptualizations may be considered for the fractured zones. A variable density is included throughout, and a variety of options are available to facilitate the various uses of the code.« less

  17. 3D unstructured-mesh radiation transport codes

    SciTech Connect

    Morel, J.

    1997-12-31

    Three unstructured-mesh radiation transport codes are currently being developed at Los Alamos National Laboratory. The first code is ATTILA, which uses an unstructured tetrahedral mesh in conjunction with standard Sn (discrete-ordinates) angular discretization, standard multigroup energy discretization, and linear-discontinuous spatial differencing. ATTILA solves the standard first-order form of the transport equation using source iteration in conjunction with diffusion-synthetic acceleration of the within-group source iterations. DANTE is designed to run primarily on workstations. The second code is DANTE, which uses a hybrid finite-element mesh consisting of arbitrary combinations of hexahedra, wedges, pyramids, and tetrahedra. DANTE solves several second-order self-adjoint forms of the transport equation including the even-parity equation, the odd-parity equation, and a new equation called the self-adjoint angular flux equation. DANTE also offers three angular discretization options: $S{_}n$ (discrete-ordinates), $P{_}n$ (spherical harmonics), and $SP{_}n$ (simplified spherical harmonics). DANTE is designed to run primarily on massively parallel message-passing machines, such as the ASCI-Blue machines at LANL and LLNL. The third code is PERICLES, which uses the same hybrid finite-element mesh as DANTE, but solves the standard first-order form of the transport equation rather than a second-order self-adjoint form. DANTE uses a standard $S{_}n$ discretization in angle in conjunction with trilinear-discontinuous spatial differencing, and diffusion-synthetic acceleration of the within-group source iterations. PERICLES was initially designed to run on workstations, but a version for massively parallel message-passing machines will be built. The three codes will be described in detail and computational results will be presented.

  18. Transport calculations for nuclear analyses: Theory and guidelines for effective use of transport codes

    SciTech Connect

    O'Dell, R.D.; Alcouffe, R.E.

    1987-09-01

    This report is for the serious user of discrete ordinates transport computer codes for performing nuclear analysis calculations. The first section after the introduction provides a reasonably thorough mathematical description of the analytic Boltzmann transport equation. Next is a section on the numerical discretization of the energy, angle, and space variables in the transport equation, along with an introduction to the source iteration method. The fourth section provides numerical details and features pertinent to discrete ordinates codes. That section details angular quadrature, spatial discretization methods, iteration acceleration methods, and search capabilities. The fifth section presents considerations in choosing a discrete ordinates code for use, and this is followed by a section on typical discrete ordinates codes available throughout the world. The report ends with some guidance for the user. 73 refs., 18 figs., 13 tabs.

  19. Evaluation of four-dimensional nonbinary LDPC-coded modulation for next-generation long-haul optical transport networks.

    PubMed

    Zhang, Yequn; Arabaci, Murat; Djordjevic, Ivan B

    2012-04-01

    Leveraging the advanced coherent optical communication technologies, this paper explores the feasibility of using four-dimensional (4D) nonbinary LDPC-coded modulation (4D-NB-LDPC-CM) schemes for long-haul transmission in future optical transport networks. In contrast to our previous works on 4D-NB-LDPC-CM which considered amplified spontaneous emission (ASE) noise as the dominant impairment, this paper undertakes transmission in a more realistic optical fiber transmission environment, taking into account impairments due to dispersion effects, nonlinear phase noise, Kerr nonlinearities, and stimulated Raman scattering in addition to ASE noise. We first reveal the advantages of using 4D modulation formats in LDPC-coded modulation instead of conventional two-dimensional (2D) modulation formats used with polarization-division multiplexing (PDM). Then we demonstrate that 4D LDPC-coded modulation schemes with nonbinary LDPC component codes significantly outperform not only their conventional PDM-2D counterparts but also the corresponding 4D bit-interleaved LDPC-coded modulation (4D-BI-LDPC-CM) schemes, which employ binary LDPC codes as component codes. We also show that the transmission reach improvement offered by the 4D-NB-LDPC-CM over 4D-BI-LDPC-CM increases as the underlying constellation size and hence the spectral efficiency of transmission increases. Our results suggest that 4D-NB-LDPC-CM can be an excellent candidate for long-haul transmission in next-generation optical networks. PMID:22513641

  20. The uncoupled ATPase activity of the ABC transporter BtuC2D2 leads to a hysteretic conformational change, conformational memory, and improved activity.

    PubMed

    Livnat-Levanon, Nurit; I Gilson, Amy; Ben-Tal, Nir; Lewinson, Oded

    2016-01-01

    ABC transporters comprise a large and ubiquitous family of proteins. From bacteria to man they translocate solutes at the expense of ATP hydrolysis. Unlike other enzymes that use ATP as an energy source, ABC transporters are notorious for having high levels of basal ATPase activity: they hydrolyze ATP also in the absence of their substrate. It is unknown what are the effects of such prolonged and constant activity on the stability and function of ABC transporters or any other enzyme. Here we report that prolonged ATP hydrolysis is beneficial to the ABC transporter BtuC2D2. Using ATPase assays, surface plasmon resonance interaction experiments, and transport assays we observe that the constantly active transporter remains stable and functional for much longer than the idle one. Remarkably, during extended activity the transporter undergoes a slow conformational change (hysteresis) and gradually attains a hyperactive state in which it is more active than it was to begin with. This phenomenon is different from stabilization of enzymes by ligand binding: the hyperactive state is only reached through ATP hydrolysis, and not ATP binding. BtuC2D2 displays a strong conformational memory for this excited state, and takes hours to return to its basal state after catalysis terminates. PMID:26905293

  1. The uncoupled ATPase activity of the ABC transporter BtuC2D2 leads to a hysteretic conformational change, conformational memory, and improved activity

    PubMed Central

    Livnat-Levanon, Nurit; I. Gilson, Amy; Ben-Tal, Nir; Lewinson, Oded

    2016-01-01

    ABC transporters comprise a large and ubiquitous family of proteins. From bacteria to man they translocate solutes at the expense of ATP hydrolysis. Unlike other enzymes that use ATP as an energy source, ABC transporters are notorious for having high levels of basal ATPase activity: they hydrolyze ATP also in the absence of their substrate. It is unknown what are the effects of such prolonged and constant activity on the stability and function of ABC transporters or any other enzyme. Here we report that prolonged ATP hydrolysis is beneficial to the ABC transporter BtuC2D2. Using ATPase assays, surface plasmon resonance interaction experiments, and transport assays we observe that the constantly active transporter remains stable and functional for much longer than the idle one. Remarkably, during extended activity the transporter undergoes a slow conformational change (hysteresis) and gradually attains a hyperactive state in which it is more active than it was to begin with. This phenomenon is different from stabilization of enzymes by ligand binding: the hyperactive state is only reached through ATP hydrolysis, and not ATP binding. BtuC2D2 displays a strong conformational memory for this excited state, and takes hours to return to its basal state after catalysis terminates. PMID:26905293

  2. Simulations of magnetic reconnection with Parsek2D-MLMD, a new Multi Level Multi Domain (MLMD) Implicit Moment Method (IMM) Particle in Cell (PIC) code

    NASA Astrophysics Data System (ADS)

    Innocenti, M.; Beck, A.; Lapenta, G.; Markidis, S.

    2012-12-01

    The kinetic simulation of intrinsically multi scale processes such as magnetic reconnection events with realistic mass ratios is a daunting task for explicit Particle In Cell (PIC) codes, which require to use resolutions of the order of the electron Debye length even when simulating dramatically bigger domains. As an example, a simulation of reconnection in the magnetotail, with domain sizes of the order of 20 di x 10 di (˜ 7.2 106 m x 3.6 106 m, with di being the ion skin depth) and a resolution of λD,e= 687 m, with λD,e the electron Debye length, requires the astounding number of 10500 x 5240 cells. Higher grid spacings can be used if the simulation is performed with an implicit PIC code, which substitutes a much less strict accuracy constraint to the stability constraint of explicit PIC codes. The same reconnection problem as before can be simulated, with an implicit PIC code resolving the scale of interest of de /2 instead of the electron Debye length (de is the electron skin depth), with the much more manageable number of 1920 x 958 cells. However, an even smaller number of cells can be used if, instead of using the same, high resolution on the entire domain, the domain to simulate is divided into subdomains each resolved with a grid spacing related to the physical scale of interest in the specific subdomain. In the case of reconnection, the division which immediately springs to mind is between electron diffusion region, ion diffusion region and outer region, where resolutions respectively of the order of fractions of the electron skin depth, of the ion skin depth and bigger can be used. We present here a new Multi Level Multi Domain (MLMD) Implicit Moment Method (IMM) Particle In Cell (PIC) code, Parsek2D-MLMD, able to perform simulations of magnetic reconnection where the expensive high resolutions are used only when needed, while the rest of the domain is simulated with grid spacings chosen according to the local scales of interest. The major difference

  3. Documentation for TRACE: an interactive beam-transport code

    SciTech Connect

    Crandall, K.R.; Rusthoi, D.P.

    1985-01-01

    TRACE is an interactive, first-order, beam-dynamics computer program. TRACE includes space-charge forces and mathematical models for a number of beamline elements not commonly found in beam-transport codes, such as permanent-magnet quadrupoles, rf quadrupoles, rf gaps, accelerator columns, and accelerator tanks. TRACE provides an immediate graphic display of calculative results, has a powerful and easy-to-use command procedure, includes eight different types of beam-matching or -fitting capabilities, and contains its own internal HELP package. This report describes the models and equations used for each of the transport elements, the fitting procedures, and the space-charge/emittance calculations, and provides detailed instruction for using the code.

  4. Reduced Fast Ion Transport Model For The Tokamak Transport Code TRANSP

    SciTech Connect

    Podesta,, Mario; Gorelenkova, Marina; White, Roscoe

    2014-02-28

    Fast ion transport models presently implemented in the tokamak transport code TRANSP [R. J. Hawryluk, in Physics of Plasmas Close to Thermonuclear Conditions, CEC Brussels, 1 , 19 (1980)] are not capturing important aspects of the physics associated with resonant transport caused by instabilities such as Toroidal Alfv en Eigenmodes (TAEs). This work describes the implementation of a fast ion transport model consistent with the basic mechanisms of resonant mode-particle interaction. The model is formulated in terms of a probability distribution function for the particle's steps in phase space, which is consistent with the MonteCarlo approach used in TRANSP. The proposed model is based on the analysis of fast ion response to TAE modes through the ORBIT code [R. B. White et al., Phys. Fluids 27 , 2455 (1984)], but it can be generalized to higher frequency modes (e.g. Compressional and Global Alfv en Eigenmodes) and to other numerical codes or theories.

  5. Simulation of neoclassical transport with the continuum gyrokinetic code COGENT

    SciTech Connect

    Dorf, M. A.; Cohen, R. H.; Dorr, M.; Rognlien, T.; Hittinger, J.; Compton, J.; Colella, P.; Martin, D.; McCorquodale, P.

    2013-01-15

    The development of the continuum gyrokinetic code COGENT for edge plasma simulations is reported. The present version of the code models a nonlinear axisymmetric 4D (R, v{sub Parallel-To }, {mu}) gyrokinetic equation coupled to the long-wavelength limit of the gyro-Poisson equation. Here, R is the particle gyrocenter coordinate in the poloidal plane, and v{sub Parallel-To} and {mu} are the guiding center velocity parallel to the magnetic field and the magnetic moment, respectively. The COGENT code utilizes a fourth-order finite-volume (conservative) discretization combined with arbitrary mapped multiblock grid technology (nearly field-aligned on blocks) to handle the complexity of tokamak divertor geometry with high accuracy. Topics presented are the implementation of increasingly detailed model collision operators, and the results of neoclassical transport simulations including the effects of a strong radial electric field characteristic of a tokamak pedestal under H-mode conditions.

  6. Validation of a comprehensive space radiation transport code.

    PubMed

    Shinn, J L; Cucinotta, F A; Simonsen, L C; Wilson, J W; Badavi, F F; Badhwar, G D; Miller, J; Zeitlin, C; Heilbronn, L; Tripathi, R K; Clowdsley, M S; Heinbockel, J H; Xapsos, M A

    1998-12-01

    The HZETRN code has been developed over the past decade to evaluate the local radiation fields within sensitive materials on spacecraft in the space environment. Most of the more important nuclear and atomic processes are now modeled and evaluation within a complex spacecraft geometry with differing material components, including transition effects across boundaries of dissimilar materials, are included. The atomic/nuclear database and transport procedures have received limited validation in laboratory testing with high energy ion beams. The codes have been applied in design of the SAGE-III instrument resulting in material changes to control injurious neutron production, in the study of the Space Shuttle single event upsets, and in validation with space measurements (particle telescopes, tissue equivalent proportional counters, CR-39) on Shuttle and Mir. The present paper reviews the code development and presents recent results in laboratory and space flight validation. PMID:11542474

  7. Simulation of neoclassical transport with the continuum gyrokinetic code COGENT

    DOE PAGESBeta

    Dorf, M. A.; Cohen, R. H.; Dorr, M.; Rognlien, T.; Hittinger, J.; Compton, J.; Colella, P.; Martin, D.; McCorquodale, P.

    2013-01-25

    The development of the continuum gyrokinetic code COGENT for edge plasma simulations is reported. The present version of the code models a nonlinear axisymmetric 4D (R, v∥, μ) gyrokinetic equation coupled to the long-wavelength limit of the gyro-Poisson equation. Here, R is the particle gyrocenter coordinate in the poloidal plane, and v∥ and μ are the guiding center velocity parallel to the magnetic field and the magnetic moment, respectively. The COGENT code utilizes a fourth-order finite-volume (conservative) discretization combined with arbitrary mapped multiblock grid technology (nearly field-aligned on blocks) to handle the complexity of tokamak divertor geometry with high accuracy.more » Furthermore, topics presented are the implementation of increasingly detailed model collision operators, and the results of neoclassical transport simulations including the effects of a strong radial electric field characteristic of a tokamak pedestal under H-mode conditions.« less

  8. Simulation of neoclassical transport with the continuum gyrokinetic code COGENT

    SciTech Connect

    Dorf, M. A.; Cohen, R. H.; Dorr, M.; Rognlien, T.; Hittinger, J.; Compton, J.; Colella, P.; Martin, D.; McCorquodale, P.

    2013-01-25

    The development of the continuum gyrokinetic code COGENT for edge plasma simulations is reported. The present version of the code models a nonlinear axisymmetric 4D (R, v∥, μ) gyrokinetic equation coupled to the long-wavelength limit of the gyro-Poisson equation. Here, R is the particle gyrocenter coordinate in the poloidal plane, and v∥ and μ are the guiding center velocity parallel to the magnetic field and the magnetic moment, respectively. The COGENT code utilizes a fourth-order finite-volume (conservative) discretization combined with arbitrary mapped multiblock grid technology (nearly field-aligned on blocks) to handle the complexity of tokamak divertor geometry with high accuracy. Furthermore, topics presented are the implementation of increasingly detailed model collision operators, and the results of neoclassical transport simulations including the effects of a strong radial electric field characteristic of a tokamak pedestal under H-mode conditions.

  9. New Parallel computing framework for radiation transport codes

    SciTech Connect

    Kostin, M.A.; Mokhov, N.V.; Niita, K.; /JAERI, Tokai

    2010-09-01

    A new parallel computing framework has been developed to use with general-purpose radiation transport codes. The framework was implemented as a C++ module that uses MPI for message passing. The module is significantly independent of radiation transport codes it can be used with, and is connected to the codes by means of a number of interface functions. The framework was integrated with the MARS15 code, and an effort is under way to deploy it in PHITS. Besides the parallel computing functionality, the framework offers a checkpoint facility that allows restarting calculations with a saved checkpoint file. The checkpoint facility can be used in single process calculations as well as in the parallel regime. Several checkpoint files can be merged into one thus combining results of several calculations. The framework also corrects some of the known problems with the scheduling and load balancing found in the original implementations of the parallel computing functionality in MARS15 and PHITS. The framework can be used efficiently on homogeneous systems and networks of workstations, where the interference from the other users is possible.

  10. Parallelization of a Monte Carlo particle transport simulation code

    NASA Astrophysics Data System (ADS)

    Hadjidoukas, P.; Bousis, C.; Emfietzoglou, D.

    2010-05-01

    We have developed a high performance version of the Monte Carlo particle transport simulation code MC4. The original application code, developed in Visual Basic for Applications (VBA) for Microsoft Excel, was first rewritten in the C programming language for improving code portability. Several pseudo-random number generators have been also integrated and studied. The new MC4 version was then parallelized for shared and distributed-memory multiprocessor systems using the Message Passing Interface. Two parallel pseudo-random number generator libraries (SPRNG and DCMT) have been seamlessly integrated. The performance speedup of parallel MC4 has been studied on a variety of parallel computing architectures including an Intel Xeon server with 4 dual-core processors, a Sun cluster consisting of 16 nodes of 2 dual-core AMD Opteron processors and a 200 dual-processor HP cluster. For large problem size, which is limited only by the physical memory of the multiprocessor server, the speedup results are almost linear on all systems. We have validated the parallel implementation against the serial VBA and C implementations using the same random number generator. Our experimental results on the transport and energy loss of electrons in a water medium show that the serial and parallel codes are equivalent in accuracy. The present improvements allow for studying of higher particle energies with the use of more accurate physical models, and improve statistics as more particles tracks can be simulated in low response time.

  11. High-pressure melt growth and transport properties of SiP, SiAs, GeP, and GeAs 2D layered semiconductors

    NASA Astrophysics Data System (ADS)

    Barreteau, C.; Michon, B.; Besnard, C.; Giannini, E.

    2016-06-01

    Silicon and Germanium monopnictides SiP, SiAs, GeP and GeAs form a family of 2D layered semiconductors. We have succeeded in growing bulk single crystals of these compounds by melt-growth under high pressure (0.5-1 GPa) in a cubic anvil hot press. Large (mm-size), shiny, micaceous crystals of GeP, GeAs and SiAs were obtained, and could be exfoliated into 2D flakes. Small and brittle crystals of SiP were yielded by this method. High-pressure sintered polycrystalline SiP and GeAs have also been successfully used as a precursor in the Chemical Vapor Transport growth of these crystals in the presence of I2 as a transport agent. All compounds are found to crystallize in the expected layered structure and do not undergo any structural transition at low temperature, as shown by Raman spectroscopy down to T=5 K. All materials exhibit a semiconducting behavior. The electrical resistivity of GeP, GeAs and SiAs is found to depend on temperature following a 2D-Variable Range Hopping conduction mechanism. The availability of bulk crystals of these compounds opens new perspectives in the field of 2D semiconducting materials for device applications.

  12. Dopamine D1, D2, D3 Receptors, Vesicular Monoamine Transporter Type-2 (VMAT2) and Dopamine Transporter (DAT) Densities in Aged Human Brain

    PubMed Central

    Sun, Jianjun; Xu, Jinbin; Cairns, Nigel J.; Perlmutter, Joel S.; Mach, Robert H.

    2012-01-01

    The dopamine D1, D2, D3 receptors, vesicular monoamine transporter type-2 (VMAT2), and dopamine transporter (DAT) densities were measured in 11 aged human brains (aged 77–107.8, mean: 91 years) by quantitative autoradiography. The density of D1 receptors, VMAT2, and DAT was measured using [3H]SCH23390, [3H]dihydrotetrabenazine, and [3H]WIN35428, respectively. The density of D2 and D3 receptors was calculated using the D3-preferring radioligand, [3H]WC-10 and the D2-preferring radioligand [3H]raclopride using a mathematical model developed previously by our group. Dopamine D1, D2, and D3 receptors are extensively distributed throughout striatum; the highest density of D3 receptors occurred in the nucleus accumbens (NAc). The density of the DAT is 10–20-fold lower than that of VMAT2 in striatal regions. Dopamine D3 receptor density exceeded D2 receptor densities in extrastriatal regions, and thalamus contained a high level of D3 receptors with negligible D2 receptors. The density of dopamine D1 linearly correlated with D3 receptor density in the thalamus. The density of the DAT was negligible in the extrastriatal regions whereas the VMAT2 was expressed in moderate density. D3 receptor and VMAT2 densities were in similar level between the aged human and aged rhesus brain samples, whereas aged human brain samples had lower range of densities of D1 and D2 receptors and DAT compared with the aged rhesus monkey brain. The differential density of D3 and D2 receptors in human brain will be useful in the interpretation of PET imaging studies in human subjects with existing radiotracers, and assist in the validation of newer PET radiotracers having a higher selectivity for dopamine D2 or D3 receptors. PMID:23185343

  13. 77 FR 18716 - Transportation Security Administration Postal Zip Code Change; Technical Amendment

    Federal Register 2010, 2011, 2012, 2013, 2014

    2012-03-28

    ... SECURITY Transportation Security Administration 49 CFR Part 1572 Transportation Security Administration Postal Zip Code Change; Technical Amendment AGENCY: Transportation Security Administration, DHS. ACTION... Achuko, Office of the Chief Counsel, TSA-2, Transportation Security Administration, 601 South 12th...

  14. No association between schizophrenia and polymorphisms within the genes for debrisoquine 4-hydroxylase (CYP2D6) and the dopamine transporter (DAT)

    SciTech Connect

    Daniels, J.; Williams, J.; Asherson, P.; McGuffin, P.; Owen, M.

    1995-02-27

    It has been suggested that the cytochrome P450 mono-oxygenase, debrisoquine 4-hydroxylase, is involved in the catabolism and processing of neurotransmitters subsequent to their reuptake into target cells. It is also thought to be related to the dopamine transporter that acts to take released dopamine back up into presynaptic terminals. The present study used the association approach to test the hypothesis that mutations in the genes for debrisoquine 4-hydroxylase (CYP2D6) and the dopamine transporter (DAT) confer susceptibility to schizophrenia. There were no differences in allele or genotype frequencies between patients and controls in the mutations causing the poor metaboliser phenotype in CYP2D6. In addition there was no association found between schizophrenia and a 48 bp repeat within the 3{prime} untranslated region of DAT. 18 refs., 2 tabs.

  15. Verification of ARES transport code system with TAKEDA benchmarks

    NASA Astrophysics Data System (ADS)

    Zhang, Liang; Zhang, Bin; Zhang, Penghe; Chen, Mengteng; Zhao, Jingchang; Zhang, Shun; Chen, Yixue

    2015-10-01

    Neutron transport modeling and simulation are central to many areas of nuclear technology, including reactor core analysis, radiation shielding and radiation detection. In this paper the series of TAKEDA benchmarks are modeled to verify the critical calculation capability of ARES, a discrete ordinates neutral particle transport code system. SALOME platform is coupled with ARES to provide geometry modeling and mesh generation function. The Koch-Baker-Alcouffe parallel sweep algorithm is applied to accelerate the traditional transport calculation process. The results show that the eigenvalues calculated by ARES are in excellent agreement with the reference values presented in NEACRP-L-330, with a difference less than 30 pcm except for the first case of model 3. Additionally, ARES provides accurate fluxes distribution compared to reference values, with a deviation less than 2% for region-averaged fluxes in all cases. All of these confirms the feasibility of ARES-SALOME coupling and demonstrate that ARES has a good performance in critical calculation.

  16. MARE2DEM: an open-source code for anisotropic inversion of controlled-source electromagnetic and magnetotelluric data using parallel adaptive 2D finite elements (Invited)

    NASA Astrophysics Data System (ADS)

    Key, K.

    2013-12-01

    This work announces the public release of an open-source inversion code named MARE2DEM (Modeling with Adaptively Refined Elements for 2D Electromagnetics). Although initially designed for the rapid inversion of marine electromagnetic data, MARE2DEM now supports a wide variety of acquisition configurations for both offshore and onshore surveys that utilize electric and magnetic dipole transmitters or magnetotelluric plane waves. The model domain is flexibly parameterized using a grid of arbitrarily shaped polygonal regions, allowing for complicated structures such as topography or seismically imaged horizons to be easily assimilated. MARE2DEM efficiently solves the forward problem in parallel by dividing the input data parameters into smaller subsets using a parallel data decomposition algorithm. The data subsets are then solved in parallel using an automatic adaptive finite element method that iterative solves the forward problem on successively refined finite element meshes until a specified accuracy tolerance is met, thus freeing the end user from the burden of designing an accurate numerical modeling grid. Regularized non-linear inversion for isotropic or anisotropic conductivity is accomplished with a new implementation of Occam's method referred to as fast-Occam, which is able to minimize the objective function in much fewer forward evaluations than the required by the original method. This presentation will review the theoretical considerations behind MARE2DEM and use a few recent offshore EM data sets to demonstrate its capabilities and to showcase the software interface tools that streamline model building and data inversion.

  17. Comparison of Space Radiation Calculations from Deterministic and Monte Carlo Transport Codes

    NASA Technical Reports Server (NTRS)

    Adams, J. H.; Lin, Z. W.; Nasser, A. F.; Randeniya, S.; Tripathi, r. K.; Watts, J. W.; Yepes, P.

    2010-01-01

    The presentation outline includes motivation, radiation transport codes being considered, space radiation cases being considered, results for slab geometry, results from spherical geometry, and summary. ///////// main physics in radiation transport codes hzetrn uprop fluka geant4, slab geometry, spe, gcr,

  18. C5 Benchmark Problem with Discrete Ordinate Radiation Transport Code DENOVO

    SciTech Connect

    Yesilyurt, Gokhan; Clarno, Kevin T; Evans, Thomas M; Davidson, Gregory G; Fox, Patricia B

    2011-01-01

    The C5 benchmark problem proposed by the Organisation for Economic Co-operation and Development/Nuclear Energy Agency was modeled to examine the capabilities of Denovo, a three-dimensional (3-D) parallel discrete ordinates (S{sub N}) radiation transport code, for problems with no spatial homogenization. Denovo uses state-of-the-art numerical methods to obtain accurate solutions to the Boltzmann transport equation. Problems were run in parallel on Jaguar, a high-performance supercomputer located at Oak Ridge National Laboratory. Both the two-dimensional (2-D) and 3-D configurations were analyzed, and the results were compared with the reference MCNP Monte Carlo calculations. For an additional comparison, SCALE/KENO-V.a Monte Carlo solutions were also included. In addition, a sensitivity analysis was performed for the optimal angular quadrature and mesh resolution for both the 2-D and 3-D infinite lattices of UO{sub 2} fuel pin cells. Denovo was verified with the C5 problem. The effective multiplication factors, pin powers, and assembly powers were found to be in good agreement with the reference MCNP and SCALE/KENO-V.a Monte Carlo calculations.

  19. VERIFICATION OF TRANSPORT CODES BY THE METHOD OF MANUFACTURED SOLUTIONS: THE ATTILA EXPERIENCE

    SciTech Connect

    S. D. PAUTZ

    2001-03-19

    We extend the Method of Manufactured Solutions (MMS) to the verification of transport codes. We derive analytic fixed sources required by the MMS procedure for several types of transport problems and apply the method to the Attila transport code. By means of this method we discover and correct several coding mistakes in Attila and ultimately verify its correct implementation for the problems studied. Our studies reveal that the MMS procedure is a useful tool for transport code development.

  20. Application of the INSTANT-HPS PN Transport Code to the C5G7 Benchmark Problem

    SciTech Connect

    Y. Wang; H. Zhang; R. H. Szilard; R. C. Martineau

    2011-06-01

    INSTANT is the INL's next generation neutron transport solver to support high-fidelity multi-physics reactor simulation INSTANT is in continuous development to extend its capability Code is designed to take full advantage of middle to large cluster (10-1000 processors) Code is designed to focus on method adaptation while also mesh adaptation will be possible. It utilizes the most modern computing techniques to generate a neutronics tool of full-core transport calculations for reactor analysis and design. It can perform calculations on unstructured 2D/3D triangular, hexagonal and Cartesian geometries. Calculations can be easily extended to more geometries because of the independent mesh framework coded with the model Fortran. This code has a multigroup solver with thermal rebalance and Chebyshev acceleration. It employs second-order PN and Hybrid Finite Element method (PNHFEM) discretization scheme. Three different in-group solvers - preconditioned Conjugate Gradient (CG) method, preconditioned Generalized Minimal Residual Method (GMRES) and Red-Black iteration - have been implemented and parallelized with the spatial domain decomposition in the code. The input is managed with extensible markup language (XML) format. 3D variables including the flux distributions are outputted into VTK files, which can be visualized by tools such as VisIt and ParaView. An extension of the code named INSTANTHPS provides the capability to perform 3D heterogeneous transport calculations within fuel pins. C5G7 is an OECD/NEA benchmark problem created to test the ability of modern deterministic transport methods and codes to treat reactor core problems without spatial homogenization. This benchmark problem had been widely analyzed with various code packages. In this transaction, results of the applying the INSTANT-HPS code to the C5G7 problem are summarized.

  1. Intranuclear cascade with emission of light fragment code implemented in the transport code system PHITS

    NASA Astrophysics Data System (ADS)

    Sawada, Y.; Uozumi, Y.; Nogamine, S.; Yamada, T.; Iwamoto, Y.; Sato, T.; Niita, K.

    2012-11-01

    The Intranuclear Cascade with Emission of Light Fragment (INC-ELF) code has been developed and implemented in the Particle and Heavy Ion Transport code System (PHITS). The INC-ELF code explicitly includes nucleon correlations within the framework of the INC model to describe light fragment emissions from nuclear spallation reactions by using the model in Phys. Rev. C 84, (2011) 064617. In addition to the degrees of freedom of nucleons, the developed code also accounts for pions, Δs, and N∗s, and can cover energy ranges up to 3 GeV. The predictive capabilities of the ELF/PHITS system have been verified through comparison with a diverse set of experimental observations. In particular, the verification was conducted with abundant double-differential cross-section data covering a wide range of reactions (e.g., (p, p'x), (p, nx), (p, dx), (p, 3Hex), (p, αx) and (p, πx) reactions) over a wide energy range (between 400 MeV and 1.5 GeV). As a result, our ELF/PHITS code has demonstrated strong predictive capability for all of these data, although areas requiring future study remain due to the lack of experimental data on high-energy cluster production.

  2. Overview of Particle and Heavy Ion Transport Code System PHITS

    NASA Astrophysics Data System (ADS)

    Sato, Tatsuhiko; Niita, Koji; Matsuda, Norihiro; Hashimoto, Shintaro; Iwamoto, Yosuke; Furuta, Takuya; Noda, Shusaku; Ogawa, Tatsuhiko; Iwase, Hiroshi; Nakashima, Hiroshi; Fukahori, Tokio; Okumura, Keisuke; Kai, Tetsuya; Chiba, Satoshi; Sihver, Lembit

    2014-06-01

    A general purpose Monte Carlo Particle and Heavy Ion Transport code System, PHITS, is being developed through the collaboration of several institutes in Japan and Europe. The Japan Atomic Energy Agency is responsible for managing the entire project. PHITS can deal with the transport of nearly all particles, including neutrons, protons, heavy ions, photons, and electrons, over wide energy ranges using various nuclear reaction models and data libraries. It is written in Fortran language and can be executed on almost all computers. All components of PHITS such as its source, executable and data-library files are assembled in one package and then distributed to many countries via the Research organization for Information Science and Technology, the Data Bank of the Organization for Economic Co-operation and Development's Nuclear Energy Agency, and the Radiation Safety Information Computational Center. More than 1,000 researchers have been registered as PHITS users, and they apply the code to various research and development fields such as nuclear technology, accelerator design, medical physics, and cosmic-ray research. This paper briefly summarizes the physics models implemented in PHITS, and introduces some important functions useful for specific applications, such as an event generator mode and beam transport functions.

  3. An object-oriented implementation of a parallel Monte Carlo code for radiation transport

    NASA Astrophysics Data System (ADS)

    Santos, Pedro Duarte; Lani, Andrea

    2016-05-01

    This paper describes the main features of a state-of-the-art Monte Carlo solver for radiation transport which has been implemented within COOLFluiD, a world-class open source object-oriented platform for scientific simulations. The Monte Carlo code makes use of efficient ray tracing algorithms (for 2D, axisymmetric and 3D arbitrary unstructured meshes) which are described in detail. The solver accuracy is first verified in testcases for which analytical solutions are available, then validated for a space re-entry flight experiment (i.e. FIRE II) for which comparisons against both experiments and reference numerical solutions are provided. Through the flexible design of the physical models, ray tracing and parallelization strategy (fully reusing the mesh decomposition inherited by the fluid simulator), the implementation was made efficient and reusable.

  4. AnisWave 2D

    2004-08-01

    AnisWave2D is a 2D finite-difference code for a simulating seismic wave propagation in fully anisotropic materials. The code is implemented to run in parallel over multiple processors and is fully portable. A mesh refinement algorithm has been utilized to allow the grid-spacing to be tailored to the velocity model, avoiding the over-sampling of high-velocity materials that usually occurs in fixed-grid schemes.

  5. Status of the solar and infrared radiation submodels in the LLNL 1-D and 2-D chemical-transport models

    SciTech Connect

    Grant, K.E.; Taylor, K.E.; Ellis, J.S.; Wuebbles, D.J.

    1987-07-01

    The authors have implemented a series of state of the art radiation transport submodels in previously developed one dimensional and two dimensional chemical transport models of the troposphere and stratosphere. These submodels provide the capability of calculating accurate solar and infrared heating rates. They are a firm basis for further radiation submodel development as well as for studying interactions between radiation and model dynamics under varying conditions of clear sky, clouds, and aerosols. 37 refs., 3 figs.

  6. Multidimensional electron-photon transport with standard discrete ordinates codes

    SciTech Connect

    Drumm, C.R.

    1997-04-01

    A method is described for generating electron cross sections that are comparable with standard discrete ordinates codes without modification. There are many advantages of using an established discrete ordinates solver, e.g. immediately available adjoint capability. Coupled electron-photon transport capability is needed for many applications, including the modeling of the response of electronics components to space and man-made radiation environments. The cross sections have been successfully used in the DORT, TWODANT and TORT discrete ordinates codes. The cross sections are shown to provide accurate and efficient solutions to certain multidimensional electron-photon transport problems. The key to the method is a simultaneous solution of the continuous-slowing-down (CSD) portion and elastic-scattering portion of the scattering source by the Goudsmit-Saunderson theory. The resulting multigroup-Legendre cross sections are much smaller than the true scattering cross sections that they represent. Under certain conditions, the cross sections are guaranteed positive and converge with a low-order Legendre expansion.

  7. Time-dependent recycling modeling with edge plasma transport codes

    NASA Astrophysics Data System (ADS)

    Pigarov, A.; Krasheninnikov, S.; Rognlien, T.; Taverniers, S.; Hollmann, E.

    2013-10-01

    First,we discuss extensions to Macroblob approach which allow to simulate more accurately dynamics of ELMs, pedestal and edge transport with UEDGE code. Second,we present UEDGE modeling results for H mode discharge with infrequent ELMs and large pedestal losses on DIII-D. In modeled sequence of ELMs this discharge attains a dynamic equilibrium. Temporal evolution of pedestal plasma profiles, spectral line emission, and surface temperature matching experimental data over ELM cycle is discussed. Analysis of dynamic gas balance highlights important role of material surfaces. We quantified the wall outgassing between ELMs as 3X the NBI fueling and the recycling coefficient as 0.8 for wall pumping via macroblob-wall interactions. Third,we also present results from multiphysics version of UEDGE with built-in, reduced, 1-D wall models and analyze the role of various PMI processes. Progress in framework-coupled UEDGE/WALLPSI code is discussed. Finally, implicit coupling schemes are important feature of multiphysics codes and we report on the results of parametric analysis of convergence and performance for Picard and Newton iterations in a system of coupled deterministic-stochastic ODE and proposed modifications enhancing convergence.

  8. A zero-equation turbulent electron transport model for cross-field migration and its implementation in a 2-D hybrid plasma Hall thruster simulation

    NASA Astrophysics Data System (ADS)

    Cappelli, Mark; Young, Chris; Cha, Eusnun; Fernandez, Eduardo; Stanford Plasma Physics Laboratory Collaboration; Eckerd College Collaboration

    2015-09-01

    We present a simple, zero-equation turbulence model for electron transport across the magnetic field of a plasma Hall thruster and integrate this model into 2-D hybrid particle-in-cell simulations of a 72 mm diameter laboratory thruster operating at 400 W. The turbulent transport model is based on the assumption that the primary means of electron energy dissipation is the turbulent eddy cascade in the electron fluid to smaller scales. Implementing the model into 2-D hybrid simulations is relatively straightforward and leverages the existing framework for solving the electron fluid equations. We find that the model captures the strong axial variation in the mobility seen in experiments. In particular, it predicts the existence of a strong transport barrier which anchors the region of plasma acceleration. The model also captures the time-averaged experimental discharge current and its fluctuations due to ionization instabilities. We observe quantitative agreement with recent laser induced fluorescence measurements of time-averaged xenon ion and neutral velocities along the channel centerline. This work was supported by the Air Force Office of Scientific Research.

  9. Dimensionality-dependent charge transport in close-packed nanoparticle arrays: from 2D to 3D

    PubMed Central

    Wang, Ying; Duan, Chao; Peng, Lianmao; Liao, Jianhui

    2014-01-01

    Charge transport properties in close-packed nanoparticle arrays with thickness crossing over from two dimensions to three dimensions have been studied. The dimensionality transition of nanoparticle arrays was realized by continually printing spatially well-defined nanoparticle monolayers on top of the device in situ. The evolution of charge transport properties depending on the dimensionality has been investigated in both the Efros-Shaklovskii variable-range-hopping (ES-VRH) (low temperature) regime and the sequential hopping (SH) (medium temperature) regime. We find that the energy barriers to transport decrease when the thickness of nanoparticle arrays increases from monolayer to multilayers, but start to level off at the thickness of 4–5 monolayers. The energy barriers are characterized by the coefficient βD at ES-VRH regime and the activation energy Ea at SH regime. Moreover, a turning point for the temperature coefficient of conductance was observed in multilayer nanoparticle arrays at high temperature, which is attributed to the increasing mobility with decreasing temperature of hopping transport in three dimensions. PMID:25523836

  10. Dimensionality-dependent charge transport in close-packed nanoparticle arrays: from 2D to 3D.

    PubMed

    Wang, Ying; Duan, Chao; Peng, Lianmao; Liao, Jianhui

    2014-01-01

    Charge transport properties in close-packed nanoparticle arrays with thickness crossing over from two dimensions to three dimensions have been studied. The dimensionality transition of nanoparticle arrays was realized by continually printing spatially well-defined nanoparticle monolayers on top of the device in situ. The evolution of charge transport properties depending on the dimensionality has been investigated in both the Efros-Shaklovskii variable-range-hopping (ES-VRH) (low temperature) regime and the sequential hopping (SH) (medium temperature) regime. We find that the energy barriers to transport decrease when the thickness of nanoparticle arrays increases from monolayer to multilayers, but start to level off at the thickness of 4-5 monolayers. The energy barriers are characterized by the coefficient βD at ES-VRH regime and the activation energy Ea at SH regime. Moreover, a turning point for the temperature coefficient of conductance was observed in multilayer nanoparticle arrays at high temperature, which is attributed to the increasing mobility with decreasing temperature of hopping transport in three dimensions. PMID:25523836

  11. Dimensionality-dependent charge transport in close-packed nanoparticle arrays: from 2D to 3D

    NASA Astrophysics Data System (ADS)

    Wang, Ying; Duan, Chao; Peng, Lianmao; Liao, Jianhui

    2014-12-01

    Charge transport properties in close-packed nanoparticle arrays with thickness crossing over from two dimensions to three dimensions have been studied. The dimensionality transition of nanoparticle arrays was realized by continually printing spatially well-defined nanoparticle monolayers on top of the device in situ. The evolution of charge transport properties depending on the dimensionality has been investigated in both the Efros-Shaklovskii variable-range-hopping (ES-VRH) (low temperature) regime and the sequential hopping (SH) (medium temperature) regime. We find that the energy barriers to transport decrease when the thickness of nanoparticle arrays increases from monolayer to multilayers, but start to level off at the thickness of 4-5 monolayers. The energy barriers are characterized by the coefficient βD at ES-VRH regime and the activation energy Ea at SH regime. Moreover, a turning point for the temperature coefficient of conductance was observed in multilayer nanoparticle arrays at high temperature, which is attributed to the increasing mobility with decreasing temperature of hopping transport in three dimensions.

  12. A massively parallel method of characteristic neutral particle transport code for GPUs

    SciTech Connect

    Boyd, W. R.; Smith, K.; Forget, B.

    2013-07-01

    Over the past 20 years, parallel computing has enabled computers to grow ever larger and more powerful while scientific applications have advanced in sophistication and resolution. This trend is being challenged, however, as the power consumption for conventional parallel computing architectures has risen to unsustainable levels and memory limitations have come to dominate compute performance. Heterogeneous computing platforms, such as Graphics Processing Units (GPUs), are an increasingly popular paradigm for solving these issues. This paper explores the applicability of GPUs for deterministic neutron transport. A 2D method of characteristics (MOC) code - OpenMOC - has been developed with solvers for both shared memory multi-core platforms as well as GPUs. The multi-threading and memory locality methodologies for the GPU solver are presented. Performance results for the 2D C5G7 benchmark demonstrate 25-35 x speedup for MOC on the GPU. The lessons learned from this case study will provide the basis for further exploration of MOC on GPUs as well as design decisions for hardware vendors exploring technologies for the next generation of machines for scientific computing. (authors)

  13. The effect of electron-hole scattering on transport properties of a 2D semimetal in the HgTe quantum well

    SciTech Connect

    Entin, M. V.; Magarill, L. I.; Olshanetsky, E. B. Kvon, Z. D.; Mikhailov, N. N.; Dvoretsky, S. A.

    2013-11-15

    The influence of e-h scattering on the conductivity and magnetotransport of 2D semimetallic HgTe is studied both theoretically and experimentally. The presence of e-h scattering leads to the friction between electrons and holes resulting in a large temperature-dependent contribution to the transport coefficients. The coefficient of friction between electrons and holes is determined. The comparison of experimental data with the theory shows that the interaction between electrons and holes based on the long-range Coulomb potential strongly underestimates the e-h friction. The experimental results are in agreement with the model of strong short-range e-h interaction.

  14. The Langley Stability and Transition Analysis Code (LASTRAC) : LST, Linear and Nonlinear PSE for 2-D, Axisymmetric, and Infinite Swept Wing Boundary Layers

    NASA Technical Reports Server (NTRS)

    Chang, Chau-Lyan

    2003-01-01

    During the past two decades, our understanding of laminar-turbulent transition flow physics has advanced significantly owing to, in a large part, the NASA program support such as the National Aerospace Plane (NASP), High-speed Civil Transport (HSCT), and Advanced Subsonic Technology (AST). Experimental, theoretical, as well as computational efforts on various issues such as receptivity and linear and nonlinear evolution of instability waves take part in broadening our knowledge base for this intricate flow phenomenon. Despite all these advances, transition prediction remains a nontrivial task for engineers due to the lack of a widely available, robust, and efficient prediction tool. The design and development of the LASTRAC code is aimed at providing one such engineering tool that is easy to use and yet capable of dealing with a broad range of transition related issues. LASTRAC was written from scratch based on the state-of-the-art numerical methods for stability analysis and modem software technologies. At low fidelity, it allows users to perform linear stability analysis and N-factor transition correlation for a broad range of flow regimes and configurations by using either the linear stability theory (LST) or linear parabolized stability equations (LPSE) method. At high fidelity, users may use nonlinear PSE to track finite-amplitude disturbances until the skin friction rise. Coupled with the built-in receptivity model that is currently under development, the nonlinear PSE method offers a synergistic approach to predict transition onset for a given disturbance environment based on first principles. This paper describes the governing equations, numerical methods, code development, and case studies for the current release of LASTRAC. Practical applications of LASTRAC are demonstrated for linear stability calculations, N-factor transition correlation, non-linear breakdown simulations, and controls of stationary crossflow instability in supersonic swept wing boundary

  15. Physics models in the toroidal transport code PROCTR

    SciTech Connect

    Howe, H.C.

    1990-08-01

    The physics models that are contained in the toroidal transport code PROCTR are described in detail. Time- and space-dependent models are included for the plasma hydrogenic-ion, helium, and impurity densities, the electron and ion temperatures, the toroidal rotation velocity, and the toroidal current profile. Time- and depth-dependent models for the trapped and mobile hydrogenic particle concentrations in the wall and a time-dependent point model for the number of particles in the limiter are also included. Time-dependent models for neutral particle transport, neutral beam deposition and thermalization, fusion heating, impurity radiation, pellet injection, and the radial electric potential are included and recalculated periodically as the time-dependent models evolve. The plasma solution is obtained either in simple flux coordinates, where the radial shift of each elliptical, toroidal flux surface is included to maintain an approximate pressure equilibrium, or in general three-dimensional torsatron coordinates represented by series of helical harmonics. The detailed coupling of the plasma, scrape-off layer, limiter, and wall models through the neutral transport model makes PROCTR especially suited for modeling of recycling and particle control in toroidal plasmas. The model may also be used in a steady-state profile analysis mode for studying energy and particle balances starting with measured plasma profiles.

  16. PRESTO low-level waste transport and risk assessment code

    SciTech Connect

    Little, C.A.; Fields, D.E.; McDowell-Boyer, L.M.; Emerson, C.J.

    1981-01-01

    PRESTO (Prediction of Radiation Effects from Shallow Trench Operations) is a computer code developed under US Environmental Protection Agency (EPA) funding to evaluate possible health effects from shallow land burial trenches. The model is intended to be generic and to assess radionuclide transport, ensuing exposure, and health impact to a static local population for a 1000-y period following the end of burial operations. Human exposure scenarios considered by the model include normal releases (including leaching and operational spillage), human intrusion, and site farming or reclamation. Pathways and processes of transit from the trench to an individual or population inlude: groundwater transport, overland flow, erosion, surface water dilution, resuspension, atmospheric transport, deposition, inhalation, and ingestion of contaminated beef, milk, crops, and water. Both population doses and individual doses are calculated as well as doses to the intruder and farmer. Cumulative health effects in terms of deaths from cancer are calculated for the population over the thousand-year period using a life-table approach. Data bases are being developed for three extant shallow land burial sites: Barnwell, South Carolina; Beatty, Nevada; and West Valley, New York.

  17. MICADO: Parallel implementation of a 2D-1D iterative algorithm for the 3D neutron transport problem in prismatic geometries

    SciTech Connect

    Fevotte, F.; Lathuiliere, B.

    2013-07-01

    The large increase in computing power over the past few years now makes it possible to consider developing 3D full-core heterogeneous deterministic neutron transport solvers for reference calculations. Among all approaches presented in the literature, the method first introduced in [1] seems very promising. It consists in iterating over resolutions of 2D and ID MOC problems by taking advantage of prismatic geometries without introducing approximations of a low order operator such as diffusion. However, before developing a solver with all industrial options at EDF, several points needed to be clarified. In this work, we first prove the convergence of this iterative process, under some assumptions. We then present our high-performance, parallel implementation of this algorithm in the MICADO solver. Benchmarking the solver against the Takeda case shows that the 2D-1D coupling algorithm does not seem to affect the spatial convergence order of the MOC solver. As for performance issues, our study shows that even though the data distribution is suited to the 2D solver part, the efficiency of the ID part is sufficient to ensure a good parallel efficiency of the global algorithm. After this study, the main remaining difficulty implementation-wise is about the memory requirement of a vector used for initialization. An efficient acceleration operator will also need to be developed. (authors)

  18. Section 1. Simulation of surface-water integrated flow and transport in two-dimensions: SWIFT2D user's manual

    USGS Publications Warehouse

    Schaffranek, Raymond W.

    2004-01-01

    A numerical model for simulation of surface-water integrated flow and transport in two (horizontal-space) dimensions is documented. The model solves vertically integrated forms of the equations of mass and momentum conservation and solute transport equations for heat, salt, and constituent fluxes. An equation of state for salt balance directly couples solution of the hydrodynamic and transport equations to account for the horizontal density gradient effects of salt concentrations on flow. The model can be used to simulate the hydrodynamics, transport, and water quality of well-mixed bodies of water, such as estuaries, coastal seas, harbors, lakes, rivers, and inland waterways. The finite-difference model can be applied to geographical areas bounded by any combination of closed land or open water boundaries. The simulation program accounts for sources of internal discharges (such as tributary rivers or hydraulic outfalls), tidal flats, islands, dams, and movable flow barriers or sluices. Water-quality computations can treat reactive and (or) conservative constituents simultaneously. Input requirements include bathymetric and topographic data defining land-surface elevations, time-varying water level or flow conditions at open boundaries, and hydraulic coefficients. Optional input includes the geometry of hydraulic barriers and constituent concentrations at open boundaries. Time-dependent water level, flow, and constituent-concentration data are required for model calibration and verification. Model output consists of printed reports and digital files of numerical results in forms suitable for postprocessing by graphical software programs and (or) scientific visualization packages. The model is compatible with most mainframe, workstation, mini- and micro-computer operating systems and FORTRAN compilers. This report defines the mathematical formulation and computational features of the model, explains the solution technique and related model constraints, describes the

  19. 2D coherent charge transport in highly ordered conducting polymers doped by solid state diffusion.

    PubMed

    Kang, Keehoon; Watanabe, Shun; Broch, Katharina; Sepe, Alessandro; Brown, Adam; Nasrallah, Iyad; Nikolka, Mark; Fei, Zhuping; Heeney, Martin; Matsumoto, Daisuke; Marumoto, Kazuhiro; Tanaka, Hisaaki; Kuroda, Shin-Ichi; Sirringhaus, Henning

    2016-08-01

    Doping is one of the most important methods to control charge carrier concentration in semiconductors. Ideally, the introduction of dopants should not perturb the ordered microstructure of the semiconducting host. In some systems, such as modulation-doped inorganic semiconductors or molecular charge transfer crystals, this can be achieved by spatially separating the dopants from the charge transport pathways. However, in conducting polymers, dopants tend to be randomly distributed within the conjugated polymer, and as a result the transport properties are strongly affected by the resulting structural and electronic disorder. Here, we show that in the highly ordered lamellar microstructure of a regioregular thiophene-based conjugated polymer, a small-molecule p-type dopant can be incorporated by solid state diffusion into the layers of solubilizing side chains without disrupting the conjugated layers. In contrast to more disordered systems, this allows us to observe coherent, free-electron-like charge transport properties, including a nearly ideal Hall effect in a wide temperature range, a positive magnetoconductance due to weak localization and the Pauli paramagnetic spin susceptibility. PMID:27159015

  20. Fringe-controlled biodegradation under dynamic conditions: Quasi 2-D flow-through experiments and reactive-transport modeling

    NASA Astrophysics Data System (ADS)

    Eckert, Dominik; Kürzinger, Petra; Bauer, Robert; Griebler, Christian; Cirpka, Olaf A.

    2015-01-01

    Biodegradation in contaminated aquifers has been shown to be most pronounced at the fringe of contaminant plumes, where mixing of contaminated water and ambient groundwater, containing dissolved electron acceptors, stimulates microbial activity. While physical mixing of contaminant and electron acceptor by transverse dispersion has been shown to be the major bottleneck for biodegradation in steady-state plumes, so far little is known on the effect of flow and transport dynamics (caused, e.g., by a seasonally fluctuating groundwater table) on biodegradation in these systems. Towards this end we performed experiments in quasi-two-dimensional flow-through microcosms on aerobic toluene degradation by Pseudomonas putida F1. Plume dynamics were simulated by vertical alteration of the toluene plume position and experimental results were analyzed by reactive-transport modeling. We found that, even after disappearance of the toluene plume for two weeks, the majority of microorganisms stayed attached to the sediment and regained their full biodegradation potential within two days after reappearance of the toluene plume. Our results underline that besides microbial growth, also maintenance and dormancy are important processes that affect biodegradation performance under transient environmental conditions and therefore deserve increased consideration in future reactive-transport modeling.

  1. 2D photochemical modeling of Saturn's stratosphere. Part I: Seasonal variation of atmospheric composition without meridional transport

    NASA Astrophysics Data System (ADS)

    Hue, V.; Cavalié, T.; Dobrijevic, M.; Hersant, F.; Greathouse, T. K.

    2015-09-01

    Saturn's axial tilt of 26.7° produces seasons in a similar way as on Earth. Both the stratospheric temperature and composition are affected by this latitudinally varying insolation along Saturn's orbital path. A new time-dependent 2D photochemical model is presented to study the seasonal evolution of Saturn's stratospheric composition. This study focuses on the impact of the seasonally variable thermal field on the main stratospheric C2-hydrocarbon chemistry (C2H2 and C2H6) using a realistic radiative climate model. Meridional mixing and advective processes are implemented in the model but turned off in the present study for the sake of simplicity. The results are compared to a simple study case where a latitudinally and temporally steady thermal field is assumed. Our simulations suggest that, when the seasonally variable thermal field is accounted for, the downward diffusion of the seasonally produced hydrocarbons is faster due to the seasonal compression of the atmospheric column during winter. This effect increases with increasing latitudes which experience the most important thermal changes in the course of the seasons. The seasonal variability of C2H2 and C2H6 therefore persists at higher-pressure levels with a seasonally-variable thermal field. Cassini limb-observations of C2H2 and C2H6 (Guerlet, S. et al. [2009]. Icarus 203, 214-232) are reasonably well-reproduced from the equator to 40° in both hemispheres in the 0.1-1 mbar pressure range. At lower pressure levels, the models only fit the Cassini observations in the northern hemisphere, from the equator to 40°N. Beyond 40° in both hemispheres, deviations from the pure photochemical predictions, mostly in the southern hemisphere, suggest the presence of large-scale stratospheric dynamics.

  2. Summary of ground water and surface water flow and contaminant transport computer codes used at the Idaho National Engineering Laboratory (INEL). [Contaminant transport computer codes

    SciTech Connect

    Bandy, P.J.; Hall, L.F.

    1993-03-01

    This report presents information on computer codes for numerical and analytical models that have been used at the Idaho National Engineering Laboratory (INEL) to model ground water and surface water flow and contaminant transport. Organizations conducting modeling at the INEL include: EG G Idaho, Inc., US Geological Survey, and Westinghouse Idaho Nuclear Company. Information concerning computer codes included in this report are: agency responsible for the modeling effort, name of the computer code, proprietor of the code (copyright holder or original author), validation and verification studies, applications of the model at INEL, the prime user of the model, computer code description, computing environment requirements, and documentation and references for the computer code.

  3. Lead transport in intra-oceanic subduction zones: 2D geochemical-thermo-mechanical modeling of isotopic signatures

    NASA Astrophysics Data System (ADS)

    Baitsch-Ghirardello, Bettina; Stracke, Andreas; Connolly, James A. D.; Nikolaeva, Ksenia M.; Gerya, Taras V.

    2014-11-01

    Understanding the physical-chemical mechanisms and pathways of geochemical transport in subduction zones remains a long-standing goal of subduction-related research. In this study, we perform fully coupled geochemical-thermo-mechanical (GcTM) numerical simulations to investigate Pb isotopic signatures of the two key "outputs" of subduction zones: (A) serpentinite mélanges and (B) arc basalts. With this approach we analyze three different geodynamic regimes of intra-oceanic subduction systems: (1) retreating subduction with backarc spreading, (2) stable subduction with high fluid-related weakening, and (3) stable subduction with low fluid-related weakening. Numerical results suggest a three-stage Pb geochemical transport in subduction zones: (I) from subducting sediments and oceanic crust to serpentinite mélanges, (II) from subducting serpentinite mélanges to subarc asthenospheric wedge and (III) from the mantle wedge to arc volcanics. Mechanical mixing and fluid-assisted geochemical transport above slabs result in spatially and temporarily variable Pb concentrations in the serpentinized forearc mantle as well as in arc basalts. The Pb isotopic ratios are strongly heterogeneous and show five types of geochemical mixing trends: (i) binary mantle-MORB, (i) binary MORB-sediments, (iii) double binary MORB-mantle and MORB-sediments, (iv) double binary MORB-mantle and mantle-sediments and (v) triple MORB-sediment-mantle. Double binary and triple mixing trends are transient and characterize relatively early stages of subduction. In contrast, steady-state binary mantle-MORB and MORB-sediments trends are typical for mature subduction zones with respectively low and high intensity of sedimentary melange subduction. Predictions from our GcTM models are in agreement with Pb isotopic data from some natural subduction zones.

  4. A Piecewise Linear Discontinuous Finite Element Spatial Discretization of the Transport Equation in 2D Cylindrical Geometry

    SciTech Connect

    Bailey, T S; Adams, M L; Chang, J H

    2008-10-01

    We present a new spatial discretization of the discrete-ordinates transport equation in two-dimensional cylindrical (RZ) geometry for arbitrary polygonal meshes. This discretization is a discontinuous finite element method that utilizes the piecewise linear basis functions developed by Stone and Adams. We describe an asymptotic analysis that shows this method to be accurate for many problems in the thick diffusion limit on arbitrary polygons, allowing this method to be applied to radiative transfer problems with these types of meshes. We also present numerical results for multiple problems on quadrilateral grids and compare these results to the well-known bi-linear discontinuous finite element method.

  5. Time-reversal breaking and spin transport induced by magnetic impurities in a 2D topological insulator

    NASA Astrophysics Data System (ADS)

    Derakhshan, V.; Ketabi, S. A.; Moghaddam, A. G.

    2016-09-01

    We employed the formalism of bond currents, expressed in terms of non-equilibrium Green’s function to obtain the local currents and transport features of zigzag silicene ribbon in the presence of magnetic impurity. When only intrinsic and Rashba spin–orbit interactions are present, silicene behaves as a two-dimensional topological insulator with gapless edge states. But in the presence of finite intrinsic spin–orbit interaction, the edge states start to penetrate into the bulk of the sample by increasing Rashba interaction strength. The exchange interaction induced by local impurities breaks the time-reversal symmetry of the gapless edge states and influences the topological properties strongly. Subsequently, the singularity of partial Berry curvature disappears and the silicene nanoribbon becomes a trivial insulator. On the other hand, when the concentration of the magnetic impurities is low, the edge currents are not affected significantly. In this case, when the exchange field lies in the x–y plane, the spin mixing around magnetic impurity is more profound rather than the case in which the exchange field is directed along the z-axis. Nevertheless, when the exchange field of magnetic impurities is placed in the x–y plane, a spin-polarized conductance is observed. The resulting conductance polarization can be tuned by the concentration of the impurities and even completely polarized spin transport is achievable.

  6. Status of the MORSE multigroup Monte Carlo radiation transport code

    SciTech Connect

    Emmett, M.B.

    1993-06-01

    There are two versions of the MORSE multigroup Monte Carlo radiation transport computer code system at Oak Ridge National Laboratory. MORSE-CGA is the most well-known and has undergone extensive use for many years. MORSE-SGC was originally developed in about 1980 in order to restructure the cross-section handling and thereby save storage. However, with the advent of new computer systems having much larger storage capacity, that aspect of SGC has become unnecessary. Both versions use data from multigroup cross-section libraries, although in somewhat different formats. MORSE-SGC is the version of MORSE that is part of the SCALE system, but it can also be run stand-alone. Both CGA and SGC use the Multiple Array System (MARS) geometry package. In the last six months the main focus of the work on these two versions has been on making them operational on workstations, in particular, the IBM RISC 6000 family. A new version of SCALE for workstations is being released to the Radiation Shielding Information Center (RSIC). MORSE-CGA, Version 2.0, is also being released to RSIC. Both SGC and CGA have undergone other revisions recently. This paper reports on the current status of the MORSE code system.

  7. Alternate closures for radiation transport using Legendre polynomials in 1D and spherical harmonics in 2D

    NASA Astrophysics Data System (ADS)

    Olson, Gordon L.

    2012-04-01

    When using polynomial expansions for the angular variables in the radiation transport equation, the usual procedure is to truncate the series by setting all higher order terms to zero. At low order, such simple closures may not give the optimum solution. This work tests alternate closures that scale either the time- or spatial-derivatives in the highest order equation. These scale factors can be chosen such that waves propagate at exactly the speed of light in optically thin media. Alternatively, they may be chosen to significantly improve the accuracy of low-order solutions with no additional computational cost. The same scaling procedure and scale factors work in one- and multi-dimensions. In multidimensions, reducing the order of a solution can save significant amounts of computer time.

  8. Transport and Retention of Fullerene Aggregates in Heterogeneous Two Dimensional (2-D) Aquifer Cells Containing Natural Aquifer Sands

    NASA Astrophysics Data System (ADS)

    Walker, D. I.; Wolfand, J.; Wang, Y.; Bai, C.; Li, Y.; Abriola, L. M.; Pennell, K. D.

    2011-12-01

    Understanding the processes governing nanomaterial fate in subsurface environments is important due to their widespread use in commercial and manufacturing settings. To date, the majority of studies on nanoparticle transport in porous media have been conducted under idealized conditions in columns packed with uniform, clean sands. To evaluate the transport of nanoparticles in more representative subsurface systems, column and aquifer cell experiments were completed to investigate the transport of fullerene aggregates (nC60) in unwashed Ottawa sands and in the presence of low permeability lenses. To obtain independent measurements of attachment parameters, nC60 breakthrough and retention profiles were measured in 1-D columns (2.5 dia x 10.8 cm length) with three different size fractions (40-50 mesh, d50=335 μm; 80-100 mesh, d50=165 μm; and 100-140 mesh, d50=125 μm) of unwashed Ottawa sand. A three pore volume pulse of nC60 (ca. 2.5 mg/L) suspension containing 6 mM NaCl resulted in 71, 5 and 3 percent breakthrough in the 40-50, 80-100 and 100-140 mesh unwashed Ottawa sand, respectively. Solid phase retention profiles for all three size fractions exhibited hyper-exponential decline with distance from the column inlet, consistent with a physical straining process. The aquifer cells (63 x 36 x 1.4 cm) were packed with unwashed 40-50 mesh Ottawa sand as the background medium, in which rectangular lenses (2.4 cm x 9.6 cm) of lower permeability (80-100 and 100-140 mesh) were emplaced. Following completion of nonreactive tracer tests, 200-400 mL pulses of nC60 (ca. 2.5 mg/L) suspension were injected through side-ports up-gradient of the lenses. Only trace amounts of nC60 were detected in aqueous samples collected from down-gradient sampling ports. Post-experiment dissection of the aquifer cell demonstrated that solid phase concentrations of nC60 were largest surrounding the injection ports and decreased monotonically with no preferential accumulation observed at the

  9. Edge Transport Modeling using the 3D EMC3-Eirene code on Tokamaks and Stellarators

    NASA Astrophysics Data System (ADS)

    Lore, J. D.; Ahn, J. W.; Briesemeister, A.; Ferraro, N.; Labombard, B.; McLean, A.; Reinke, M.; Shafer, M.; Terry, J.

    2015-11-01

    The fluid plasma edge transport code EMC3-Eirene has been applied to aid data interpretation and understanding the results of experiments with 3D effects on several tokamaks. These include applied and intrinsic 3D magnetic fields, 3D plasma facing components, and toroidally and poloidally localized heat and particle sources. On Alcator C-Mod, a series of experiments explored the impact of toroidally and poloidally localized impurity gas injection on core confinement and asymmetries in the divertor fluxes, with the differences between the asymmetry in L-mode and H-mode qualitatively reproduced in the simulations due to changes in the impurity ionization in the private flux region. Modeling of NSTX experiments on the effect of 3D fields on detachment matched the trend of a higher density at which the detachment occurs when 3D fields are applied. On DIII-D, different magnetic field models were used in the simulation and compared against the 2D Thomson scattering diagnostic. In simulating each device different aspects of the code model are tested pointing to areas where the model must be further developed. The application to stellarator experiments will also be discussed. Work supported by U.S. DOE: DE-AC05-00OR22725, DE AC02-09CH11466, DE-FC02-99ER54512, and DE-FC02-04ER54698.

  10. Final Report for National Transport Code Collaboration PTRANSP

    SciTech Connect

    Arnold H. Kritz

    2012-06-14

    PTRANSP, which is the predictive version of the TRANSP code, was developed in a collaborative effort involving the Princeton Plasma Physics Laboratory, General Atomics Corporation, Lawrence Livermore National Laboratory, and Lehigh University. The PTRANSP/TRANSP suite of codes is the premier integrated tokamak modeling software in the United States. A production service for PTRANSP/TRANSP simulations is maintained at the Princeton Plasma Physics Laboratory; the server has a simple command line client interface and is subscribed to by about 100 researchers from tokamak projects in the US, Europe, and Asia. This service produced nearly 13000 PTRANSP/TRANSP simulations in the four year period FY 2005 through FY 2008. Major archives of TRANSP results are maintained at PPPL, MIT, General Atomics, and JET. Recent utilization, counting experimental analysis simulations as well as predictive simulations, more than doubled from slightly over 2000 simulations per year in FY 2005 and FY 2006 to over 4300 simulations per year in FY 2007 and FY 2008. PTRANSP predictive simulations applied to ITER increased eight fold from 30 simulations per year in FY 2005 and FY 2006 to 240 simulations per year in FY 2007 and FY 2008, accounting for more than half of combined PTRANSP/TRANSP service CPU resource utilization in FY 2008. PTRANSP studies focused on ITER played a key role in journal articles. Examples of validation studies carried out for momentum transport in PTRANSP simulations were presented at the 2008 IAEA conference. The increase in number of PTRANSP simulations has continued (more than 7000 TRANSP/PTRANSP simulations in 2010) and results of PTRANSP simulations appear in conference proceedings, for example the 2010 IAEA conference, and in peer reviewed papers. PTRANSP provides a bridge to the Fusion Simulation Program (FSP) and to the future of integrated modeling. Through years of widespread usage, each of the many parts of the PTRANSP suite of codes has been thoroughly

  11. OpenGeoSys-GEMS: Hybrid parallelization of a reactive transport code with MPI and threads

    NASA Astrophysics Data System (ADS)

    Kosakowski, G.; Kulik, D. A.; Shao, H.

    2012-04-01

    OpenGeoSys-GEMS is a generic purpose reactive transport code based on the operator splitting approach. The code couples the Finite-Element groundwater flow and multi-species transport modules of the OpenGeoSys (OGS) project (http://www.ufz.de/index.php?en=18345) with the GEM-Selektor research package to model thermodynamic equilibrium of aquatic (geo)chemical systems utilizing the Gibbs Energy Minimization approach (http://gems.web.psi.ch/). The combination of OGS and the GEM-Selektor kernel (GEMS3K) is highly flexible due to the object-oriented modular code structures and the well defined (memory based) data exchange modules. Like other reactive transport codes, the practical applicability of OGS-GEMS is often hampered by the long calculation time and large memory requirements. • For realistic geochemical systems which might include dozens of mineral phases and several (non-ideal) solid solutions the time needed to solve the chemical system with GEMS3K may increase exceptionally. • The codes are coupled in a sequential non-iterative loop. In order to keep the accuracy, the time step size is restricted. In combination with a fine spatial discretization the time step size may become very small which increases calculation times drastically even for small 1D problems. • The current version of OGS is not optimized for memory use and the MPI version of OGS does not distribute data between nodes. Even for moderately small 2D problems the number of MPI processes that fit into memory of up-to-date workstations or HPC hardware is limited. One strategy to overcome the above mentioned restrictions of OGS-GEMS is to parallelize the coupled code. For OGS a parallelized version already exists. It is based on a domain decomposition method implemented with MPI and provides a parallel solver for fluid and mass transport processes. In the coupled code, after solving fluid flow and solute transport, geochemical calculations are done in form of a central loop over all finite

  12. Nuclear fragmentation database for GCR transport code development

    NASA Astrophysics Data System (ADS)

    Zeitlin, C.; Guetersloh, S.; Heilbronn, L.; Miller, J.; Fukumura, A.; Iwata, Y.; Murakami, T.; Sihver, L.

    2010-09-01

    A critical need for NASA is the ability to accurately model the transport of heavy ions in the Galactic Cosmic Rays (GCR) through matter, including spacecraft walls, equipment racks, etc. Nuclear interactions are of great importance in the GCR transport problem, as they can cause fragmentation of the incoming ion into lighter ions. Since the radiation dose delivered by a particle is proportional to the square of (charge/velocity), fragmentation reduces the dose delivered by incident ions. The other mechanism by which dose can be reduced is ionization energy loss, which can lead to some particles stopping in the shielding. This is the conventional notion of shielding, but it is not applicable to human spaceflight since the particles in the GCR tend to be too energetic to be stopped in the relatively thin shielding that is possible within payload mass constraints. Our group has measured a large number of fragmentation cross sections, intended to be used as input to, or for validation of, NASA's radiation transport models. A database containing over 200 charge-changing cross sections and over 2000 fragment production cross sections has been compiled. In this report, we examine in detail the contrast between fragment measurements at large acceptance and small acceptance. We use output from the PHITS Monte Carlo code to test our assumptions using as an example 40Ar data (and simulated data) at a beam energy of 650 MeV/nucleon. We also present preliminary analysis in which isotopic resolution was attained for beryllium fragments produced by beams of 10B and 11B. Future work on the experimental data set will focus on extracting and interpreting production cross sections for light fragments.

  13. 2D dual permeability modeling of flow and transport in a two-scale structured lignitic mine soil

    NASA Astrophysics Data System (ADS)

    Dusek, J.; Gerke, H. H.; Vogel, T.; Maurer, T.; Buczko, U.

    2009-04-01

    Two-dimensional single- and dual-permeability simulations are used to analyze water and solute fluxes in heterogeneous lignitic mine soil at a forest-reclaimed mine spoil heap. The soil heterogeneity on this experimental site "Bärenbrücker Höhe" resulted from inclined dumping structures and sediment mixtures that consist of sand with lignitic dust and embedded lignitic fragments. Observations on undisturbed field suction-cell lysimeters including tracer experiments revealed funneling-type preferential flow with lateral water and bromide movement along inclined sediment structures. The spatial distribution of soil structures and fragment distributions was acquired by a digital camera and identified by a supervised classification of the digital profile image. First, a classical single-domain modeling approach was used, with spatially variable scaling factors inferred from image analyses. In the next step, a two-continuum scenario was constructed to examine additional effects of nonequilibrium on the flow regime. The scaling factors used for the preferential flow domain are here obtained from the gradient of the grayscale images. So far, the single domain scenarios failed to predict the bromide leaching patterns although water effluent could be described. Dual-permeability model allows the incorporation of structural effects and can be used as a tool to further testing other approaches that account for structure effects. The numerical study suggests that additional experiments are required to obtain better understanding of the highly complex transport processes on this experimental site.

  14. Standard and goal-oriented adaptive mesh refinement applied to radiation transport on 2D unstructured triangular meshes

    SciTech Connect

    Yaqi Wang; Jean C. Ragusa

    2011-02-01

    Standard and goal-oriented adaptive mesh refinement (AMR) techniques are presented for the linear Boltzmann transport equation. A posteriori error estimates are employed to drive the AMR process and are based on angular-moment information rather than on directional information, leading to direction-independent adapted meshes. An error estimate based on a two-mesh approach and a jump-based error indicator are compared for various test problems. In addition to the standard AMR approach, where the global error in the solution is diminished, a goal-oriented AMR procedure is devised and aims at reducing the error in user-specified quantities of interest. The quantities of interest are functionals of the solution and may include, for instance, point-wise flux values or average reaction rates in a subdomain. A high-order (up to order 4) Discontinuous Galerkin technique with standard upwinding is employed for the spatial discretization; the discrete ordinates method is used to treat the angular variable.

  15. A non-negative moment-preserving spatial discretization scheme for the linearized Boltzmann transport equation in 1-D and 2-D Cartesian geometries

    NASA Astrophysics Data System (ADS)

    Maginot, Peter G.; Morel, Jim E.; Ragusa, Jean C.

    2012-08-01

    We present a new nonlinear spatial finite-element method for the linearized Boltzmann transport equation with Sn angular discretization in 1-D and 2-D Cartesian geometries. This method has two central characteristics. First, it is equivalent to the linear-discontinuous (LD) Galerkin method whenever that method yields a strictly non-negative solution. Second, it always satisfies both the zeroth and first spatial moment equations. Because it yields the LD solution when that solution is non-negative, one might interpret our method as a classical fix-up to the LD scheme. However, fix-up schemes for the LD equations derived in the past have given up solution of the first moment equations when the LD solution is negative in order to satisfy positivity in a simple manner. We present computational results comparing our method in 1-D to the strictly non-negative linear exponential-discontinuous method and to the LD method. We present computational results in 2-D comparing our method to a recently developed LD fix-up scheme and to the LD scheme. It is demonstrated that our method is a valuable alternative to existing methods.

  16. Transport and deposition of polymer-modified Fe0 nanoparticles in 2-D heterogeneous porous media: effects of particle concentration, Fe0 content, and coatings.

    PubMed

    Phenrat, Tanapon; Cihan, Abdullah; Kim, Hye-Jin; Mital, Menka; Illangasekare, Tissa; Lowry, Gregory V

    2010-12-01

    Concentrated suspensions of polymer-modified Fe(0) nanoparticles (NZVI) are injected into heterogeneous porous media for groundwater remediation. This study evaluated the effect of porous media heterogeneity and the dispersion properties including particle concentration, Fe(0) content, and adsorbed polymer mass and layer thickness which are expected to affect the delivery and emplacement of NZVI in heterogeneous porous media in a two-dimensional (2-D) cell. Heterogeneity in hydraulic conductivity had a significant impact on the deposition of NZVI. Polymer modified NZVI followed preferential flow paths and deposited in the regions where fluid shear is insufficient to prevent NZVI agglomeration and deposition. NZVI transported in heterogeneous porous media better at low particle concentration (0.3 g/L) than at high particle concentrations (3 and 6 g/L) due to greater particle agglomeration at high concentration. High Fe(0) content decreased transport during injection due to agglomeration promoted by magnetic attraction. NZVI with a flat adsorbed polymeric layer (thickness ∼30 nm) could not be transported effectively due to pore clogging and deposition near the inlet, while NZVI with a more extended adsorbed layer thickness (i.e., ∼70 nm) were mobile in porous media. This study indicates the importance of characterizing porous media heterogeneity and NZVI dispersion properties as part of the design of a robust delivery strategy for NZVI in the subsurface. PMID:21058703

  17. Multigroup Neutron/Gamma-Ray Direct Integration Transport Code System for Two-Dimensional Cylindrical Geometry.

    1980-10-15

    Version 00 PALLAS-2DCY-FX is a code for direct integration of the transport equation in two-dimensional (r,z) geometry. It solves the energy and angular-dependent Boltzmann transport equation with general anisotropic scattering in cylindrical geometry. Its principal applications are to neutron or gamma-ray transport problems in the forward mode. The code is particularly designed for and suited to the solution of deep penetration radiation transport problems with an external (fixed) source.

  18. STEALTH - a Lagrange explicit finite-difference code for solid, structural, and thermohydraulic analysis. Volume 8A: STEALTH/WHAMSE - a 2-D fluid-structure interaction code. Computer code manual

    SciTech Connect

    Gross, M.B.

    1984-10-01

    STEALTH is a family of computer codes that can be used to calculate a variety of physical processes in which the dynamic behavior of a continuum is involved. The version of STEALTH described in this volume is designed for calculations of fluid-structure interaction. This version of the program consists of a hydrodynamic version of STEALTH which has been coupled to a finite-element code, WHAMSE. STEALTH computes the transient response of the fluid continuum, while WHAMSE computes the transient response of shell and beam structures under external fluid loadings. The coupling between STEALTH and WHAMSE is performed during each cycle or step of a calculation. Separate calculations of fluid response and structural response are avoided, thereby giving a more accurate model of the dynamic coupling between fluid and structure. This volume provides the theoretical background, the finite-difference equations, the finite-element equations, a discussion of several sample problems, a listing of the input decks for the sample problems, a programmer's manual and a description of the input records for the STEALTH/WHAMSE computer program.

  19. The use of FLO2D numerical code in lahar hazard evaluation at Popocatépetl volcano: a 2001-lahar scenario

    NASA Astrophysics Data System (ADS)

    Caballero, L.; Capra, L.

    2014-07-01

    Lahar modelling represents an excellent tool to design hazard maps. It allows the definition of potential inundation zones for different lahar magnitude scenarios and sediment concentrations. Here we present the results obtained for the 2001 syneruptive lahar at Popocatépetl volcano, based on simulations performed with FLO2D software. An accurate delineation of this event is needed since it is one of the possible scenarios considered during a volcanic crisis. One of the main issues for lahar simulation using FLO2D is the calibration of the input hydrograph and rheologic flow properties. Here we verified that geophone data can be properly calibrated by means of peak discharge calculations obtained by superelevation method. Simulation results clearly show the influence of concentration and rheologic properties on lahar depth and distribution. Modifying rheologic properties during lahar simulation strongly affect lahar distribution. More viscous lahars have a more restricted aerial distribution, thicker depths, and resulting velocities are noticeable smaller. FLO2D proved to be a very successful tool to delimitate lahar inundation zones as well as to generate different lahar scenarios not only related to lahar volume or magnitude but also to take into account different sediment concentrations and rheologies widely documented to influence lahar prone areas.

  20. The use of FLO2D numerical code in lahar hazard evaluation at Popocatépetl volcano: a 2001 lahar scenario

    NASA Astrophysics Data System (ADS)

    Caballero, L.; Capra, L.

    2014-12-01

    Lahar modeling represents an excellent tool for designing hazard maps. It allows the definition of potential inundation zones for different lahar magnitude scenarios and sediment concentrations. Here, we present the results obtained for the 2001 syneruptive lahar at Popocatépetl volcano, based on simulations performed with FLO2D software. An accurate delineation of this event is needed, since it is one of the possible scenarios considered if magmatic activity increases its magnitude. One of the main issues for lahar simulation using FLO2D is the calibration of the input hydrograph and rheological flow properties. Here, we verified that geophone data can be properly calibrated by means of peak discharge calculations obtained by the superelevation method. Digital elevation model resolution also resulted as an important factor in defining the reliability of the simulated flows. Simulation results clearly show the influence of sediment concentrations and rheological properties on lahar depth and distribution. Modifying rheological properties during lahar simulation strongly affects lahar distribution. More viscous lahars have a more restricted aerial distribution and thicker depths, and resulting velocities are noticeably smaller. FLO2D proved to be a very successful tool for delimitating lahar inundation zones as well as generating different lahar scenarios not only related to lahar volume or magnitude, but also taking into account different sediment concentrations and rheologies widely documented as influencing lahar-prone areas.

  1. Simulation of transport in the ignited ITER with 1.5-D predictive code

    NASA Astrophysics Data System (ADS)

    Becker, G.

    1995-01-01

    The confinement in the bulk and scrape-off layer plasmas of the ITER EDA and CDA is investigated with special versions of the 1.5-D BALDUR predictive transport code for the case of peaked density profiles (Cu=1.0). The code self-consistently computes 2-D equilibria and solves 1-D transport equations with empirical transport coefficients for the ohmic, L and ELMy H mode regimes. Self-sustained steady state thermonuclear burn is demonstrated for up to 500 s. It is shown to be compatible with the strong radiation losses for divertor heat load reduction caused by the seeded impurities iron, neon and argon. The corresponding global and local energy and particle transport are presented. The required radiation corrected energy confinement times of the EDA and CDA are found to be close to 4 s, which is attainable according to the ITER ELMy H mode scalings. In the reference cases, the steady state helium fraction is 7%, which already causes significant dilution of the DT fuel. The fractions of iron, neon and argon needed for the prescribed radiative power loss are given. It is shown that high radiative losses from the confinement zone, mainly by bremsstrahlung, cannot be avoided. The radiation profiles of iron and argon are found to be the same, with two thirds of the total radiation being emitted from closed flux surfaces. Fuel dilution due to iron and argon is small. The neon radiation is more peripheral, since only half of the total radiative power is lost within the separatrix. But neon is found to cause high fuel. Dilution. The combined dilution effect by helium and neon conflicts with burn control, self-sustained burn and divertor power reduction. Raising the helium fraction above 10% leads to the same difficulties owing to fuel dilution. The high helium levels of the present EDA design are thus unacceptable. For the reference EDA case, the self-consistent electron density and temperature at the separatrix are 5.6*1019 m-3 and 130 eV, respectively. The bootstrap

  2. Ruggedness of 2D code printed on grain tracers for implementing a prospective grain traceability system to the bulk grain delivery system

    Technology Transfer Automated Retrieval System (TEKTRAN)

    Food-grade tracers were printed with two-dimensional Data Matrix (DM) barcode so that they could carry simulated identifying information about grain as part of a prospective traceability system. The key factor in evaluating the tracers was their ability to be read with a code scanner after being rem...

  3. Regional Atmospheric Transport Code for Hanford Emission Tracking, Version 2(RATCHET2)

    SciTech Connect

    Ramsdell, James V.; Rishel, Jeremy P.

    2006-07-01

    This manual describes the atmospheric model and computer code for the Atmospheric Transport Module within SAC. The Atmospheric Transport Module, called RATCHET2, calculates the time-integrated air concentration and surface deposition of airborne contaminants to the soil. The RATCHET2 code is an adaptation of the Regional Atmospheric Transport Code for Hanford Emissions Tracking (RATCHET). The original RATCHET code was developed to perform the atmospheric transport for the Hanford Environmental Dose Reconstruction Project. Fundamentally, the two sets of codes are identical; no capabilities have been deleted from the original version of RATCHET. Most modifications are generally limited to revision of the run-specification file to streamline the simulation process for SAC.

  4. HETC radiation transport code development for cosmic ray shielding applications in space.

    PubMed

    Townsend, L W; Miller, T M; Gabriel, Tony A

    2005-01-01

    In order to facilitate three-dimensional analyses of space radiation shielding scenarios for future space missions, the Monte Carlo radiation transport code HETC is being extended to include transport of energetic heavy ions, such as are found in the galactic cosmic ray spectrum in space. Recently, an event generator capable of providing nuclear interaction data for use in HETC was developed and incorporated into the code. The event generator predicts the interaction product yields and production angles and energies using nuclear models and Monte Carlo techniques. Testing and validation of the extended transport code has begun. In this work, the current status of code modifications, which enable energetic heavy ions and their nuclear reaction products to be transported through thick shielding, are described. Also, initial results of code testing against available laboratory beam data for energetic heavy ions interacting in thick targets are presented. PMID:16604614

  5. Scaling in the 2D SU(3) × SU(3) spin model as a test of a new coding method for SU(3) matrices

    NASA Astrophysics Data System (ADS)

    Bunk, B.; Sommer, R.

    1985-02-01

    We present a Monte Carlo measurement of the magnetic susceptibility in the SU(3) × SU(3) spin model in two dimensions. Asymptotic scaling is verified on a 20 × 20 lattice. This laboratory is then used to test a new method for coding SU(3) variables in one (60 bit)- word of computer memory. In this approach, real numbers are truncated to fit into a 5-bit representation.

  6. Adapting hierarchical bidirectional inter prediction on a GPU-based platform for 2D and 3D H.264 video coding

    NASA Astrophysics Data System (ADS)

    Rodríguez-Sánchez, Rafael; Martínez, José Luis; Cock, Jan De; Fernández-Escribano, Gerardo; Pieters, Bart; Sánchez, José L.; Claver, José M.; de Walle, Rik Van

    2013-12-01

    The H.264/AVC video coding standard introduces some improved tools in order to increase compression efficiency. Moreover, the multi-view extension of H.264/AVC, called H.264/MVC, adopts many of them. Among the new features, variable block-size motion estimation is one which contributes to high coding efficiency. Furthermore, it defines a different prediction structure that includes hierarchical bidirectional pictures, outperforming traditional Group of Pictures patterns in both scenarios: single-view and multi-view. However, these video coding techniques have high computational complexity. Several techniques have been proposed in the literature over the last few years which are aimed at accelerating the inter prediction process, but there are no works focusing on bidirectional prediction or hierarchical prediction. In this article, with the emergence of many-core processors or accelerators, a step forward is taken towards an implementation of an H.264/AVC and H.264/MVC inter prediction algorithm on a graphics processing unit. The results show a negligible rate distortion drop with a time reduction of up to 98% for the complete H.264/AVC encoder.

  7. Conversion of radionuclide transport codes from mainframes to personal computers

    SciTech Connect

    Pon, W.D.; Marschke, S.F. )

    1987-01-01

    Converting a mainframe computer code to run on a personal computer (PC) calls for more than just a simple translation -- the converted program and associated data files must be modified to fit the PC's environment. This has been done for three well-known mainframe codes that are used to estimate the impacts of normal operational radiological releases from nuclear power plants: GALE, GASPAR, and LADTAP. The programs were converted to run on an IBM PC and combined into a single integrated package. This article describes the steps in the conversion process and shows how the mainframe codes were modified and enhanced to take advantage of the PC's ease of use.

  8. Applications of the computer codes FLUX2D and PHI3D for the electromagnetic analysis of compressed magnetic field generators and power flow channels

    SciTech Connect

    Hodgdon, M.L.; Oona, H.; Martinez, A.R.; Salon, S.; Wendling, P.; Krahenbuhl, L.; Nicolas, A.; Nicolas, L.

    1989-01-01

    We present herein the results of three electromagnetic field problems for compressed magnetic field generators and their associated power flow channels. The first problem is the computation of the transient magnetic field in a two-dimensional model of helical generator during loading. The second problem is the three-dimensional eddy current patterns in a section of an armature beneath a bifurcation point of a helical winding. Our third problem is the calculation of the three-dimensional electrostatic fields in a region known as the post-hole convolute in which a rod connects the inner and outer walls of a system of three concentric cylinders through a hole in the middle cylinder. While analytic solutions exist for many electromagnetic field problems in cases of special and ideal geometries, the solutions of these and similar problems for the proper analysis and design of compressed magnetic field generators and their related hardware require computer simulations. In earlier studies, computer models have been proposed, several based on research oriented hydrocodes to which uncoupled or partially coupled Maxwell's equations solvers are added. Although the hydrocode models address the problem of moving, deformable conductors, they are not useful for electromagnetic analysis, nor can they be considered design tools. For our studies, we take advantage of the commercial, electromagnetic computer-aided design software packages FLUX2D nd PHI3D that were developed for motor manufacturers and utilities industries. 4 refs., 6 figs.

  9. PHITS-2.76, Particle and Heavy Ion Transport code System

    2015-08-01

    Version 03 PHITS can deal with the transport of almost all particles (nucleons, nuclei, mesons, photons, and electrons) over wide energy ranges, using several nuclear reaction models and nuclear data libraries. Geometrical configuration of the simulation can be set with GG (General Geometry) or CG (Combinatorial Geometry). Various quantities such as heat deposition, track length and production yields can be deduced from the simulation, using implemented estimator functions called "tally". The code also has amore » function to draw 2D and 3D figures of the calculated results as well as the setup geometries, using a code ANGEL. The physical processes included in PHITS can be divided into two categories, transport process and collision process. In the transport process, PHITS can simulate motion of particles under external fields such as magnetic and gravity. Without the external fields, neutral particles move along a straight trajectory with constant energy up to the next collision point. However, charge particles interact many times with electrons in the material losing energy and changing direction. PHITS treats ionization processes not as collision but as a transport process, using the continuous-slowing-down approximation. The average stopping power is given by the charge density of the material and the momentum of the particle taking into account the fluctuations of the energy loss and the angular deviation. In the collision process, PHITS can simulate the elastic and inelastic interactions as well as decay of particles. The total reaction cross section, or the life time of the particle is an essential quantity in the determination of the mean free path of the transport particle. According to the mean free path, PHITS chooses the next collision point using the Monte Carlo method. To generate the secondary particles of the collision, we need the information of the final states of the collision. For neutron induced reactions in low energy region, PHITS employs

  10. PHITS-2.76, Particle and Heavy Ion Transport code System

    SciTech Connect

    2015-08-01

    Version 03 PHITS can deal with the transport of almost all particles (nucleons, nuclei, mesons, photons, and electrons) over wide energy ranges, using several nuclear reaction models and nuclear data libraries. Geometrical configuration of the simulation can be set with GG (General Geometry) or CG (Combinatorial Geometry). Various quantities such as heat deposition, track length and production yields can be deduced from the simulation, using implemented estimator functions called "tally". The code also has a function to draw 2D and 3D figures of the calculated results as well as the setup geometries, using a code ANGEL. The physical processes included in PHITS can be divided into two categories, transport process and collision process. In the transport process, PHITS can simulate motion of particles under external fields such as magnetic and gravity. Without the external fields, neutral particles move along a straight trajectory with constant energy up to the next collision point. However, charge particles interact many times with electrons in the material losing energy and changing direction. PHITS treats ionization processes not as collision but as a transport process, using the continuous-slowing-down approximation. The average stopping power is given by the charge density of the material and the momentum of the particle taking into account the fluctuations of the energy loss and the angular deviation. In the collision process, PHITS can simulate the elastic and inelastic interactions as well as decay of particles. The total reaction cross section, or the life time of the particle is an essential quantity in the determination of the mean free path of the transport particle. According to the mean free path, PHITS chooses the next collision point using the Monte Carlo method. To generate the secondary particles of the collision, we need the information of the final states of the collision. For neutron induced reactions in low energy region, PHITS employs the cross

  11. Analysis of the Momentum and Pollutant Transport at the Roof Level of 2D Idealized Street Canyons: a Large-Eddy Simulation Solution

    NASA Astrophysics Data System (ADS)

    Cheng, Wai Chi; Liu, Chun-Ho

    2010-05-01

    To investigate the detailed momentum and pollutant transports between urban street canyons and the shear layer, a large-eddy simulation (LES) model was developed to calculate the flow and pollutant dispersion in isothermal conditions. The computational domain consisted of three identical two-dimensional (2D) idealized street canyons of unity aspect ratio. The flow field was assumed to be periodic in the horizontal domain boundaries. The subgrid-scale (SGS) stress was calculated by solving the SGS turbulent kinetic energy (TKE) conservation. An area pollutant source with constant pollutant concentration was prescribed on the ground of all streets. Zero pollutant concentration and an open boundary were applied at the domain inflow and outflow, respectively. The quadrant and budget analyses were employed to examine the momentum and pollutant transports at the roof level of the street canyons. Quadrant analyses of the resolved-scale vertical fluxes of momentum and pollutant along the roof level were performed to compare the contributions of different events/scales to the transport processes. The roof of the street canyon is divided into five segments, namely leeward side, upwind shift, center core, downwind shift and windward side in the streamwise direction. Among the four quadrants considered, the sweeps/ejections, which correspond to the downward/upward motions, dominate the momentum/pollutant transfer. The inward/outward interactions play relatively minor roles. While studying the events in detail, the contribution from the sweeps is mainly large-scale fluctuation compared with that of ejections. Moreover, most of the momentum and pollutant transports take place on the windward side. The strong shear at the roof level initiates instability that in turn promotes the increasing turbulent transport from the leeward side to the windward side. At the same time, the roof-level fluctuations grow linearly in the streamwise direction leading to the

  12. Accelerating execution of the integrated TIGER series Monte Carlo radiation transport codes

    SciTech Connect

    Smith, L.M.; Hochstedler, R.D.

    1997-02-01

    Execution of the integrated TIGER series (ITS) of coupled electron/photon Monte Carlo radiation transport codes has been accelerated by modifying the FORTRAN source code for more efficient computation. Each member code of ITS was benchmarked and profiled with a specific test case that directed the acceleration effort toward the most computationally intensive subroutines. Techniques for accelerating these subroutines included replacing linear search algorithms with binary versions, replacing the pseudo-random number generator, reducing program memory allocation, and proofing the input files for geometrical redundancies. All techniques produced identical or statistically similar results to the original code. Final benchmark timing of the accelerated code resulted in speed-up factors of 2.00 for TIGER (the one-dimensional slab geometry code), 1.74 for CYLTRAN (the two-dimensional cylindrical geometry code), and 1.90 for ACCEPT (the arbitrary three-dimensional geometry code).

  13. Code System to Calculate Waste-Isolation Flow and Transport.

    1999-10-18

    Version 00 SWIFT solves the coupled or individual equations governing fluid flow, heat transport, brine displacement, and radionuclide displacement in geologic media. Fluid flow may be transient or steady state. One, two, or three dimensions are available, and transport of radionuclides chains is possible.

  14. Sandia National Laboratories environmental fluid dynamics code : sediment transport user manual.

    SciTech Connect

    Grace, Matthew D.; Thanh, Phi Hung X.; James, Scott Carlton

    2008-09-01

    This document describes the sediment transport subroutines and input files for the Sandia National Laboratories Environmental Fluid Dynamics Code (SNL-EFDC). Detailed descriptions of the input files containing data from Sediment Erosion at Depth flume (SEDflume) measurements are provided along with the description of the source code implementing sediment transport. Both the theoretical description of sediment transport employed in SNL-EFDC and the source code are described. This user manual is meant to be used in conjunction with the EFDC manual (Hamrick 1996) because there will be no reference to the hydrodynamics in EFDC. Through this document, the authors aim to provide the necessary information for new users who wish to implement sediment transport in EFDC and obtain a clear understanding of the source code.

  15. A Code System for Assessing the Impact from Transporting Radioactive Material.

    1986-07-23

    Version 00 INTERTRAN-I calculates the radiological impact from incident-free transports and vehicular accidents involving radioactive materials. The code also handles accidents which may occur during handling operations.

  16. HZETRN: A heavy ion/nucleon transport code for space radiations

    NASA Astrophysics Data System (ADS)

    Wilson, John W.; Chun, Sang Y.; Badavi, Forooz F.; Townsend, Lawrence W.; Lamkin, Stanley L.

    1991-12-01

    The galactic heavy ion transport code (GCRTRN) and the nucleon transport code (BRYNTRN) are integrated into a code package (HZETRN). The code package is computer efficient and capable of operating in an engineering design environment for manned deep space mission studies. The nuclear data set used by the code is discussed including current limitations. Although the heavy ion nuclear cross sections are assumed constant, the nucleon-nuclear cross sections of BRYNTRN with full energy dependence are used. The relation of the final code to the Boltzmann equation is discussed in the context of simplifying assumptions. Error generation and propagation is discussed, and comparison is made with simplified analytic solutions to test numerical accuracy of the final results. A brief discussion of biological issues and their impact on fundamental developments in shielding technology is given.

  17. HZETRN: A heavy ion/nucleon transport code for space radiations

    NASA Technical Reports Server (NTRS)

    Wilson, John W.; Chun, Sang Y.; Badavi, Forooz F.; Townsend, Lawrence W.; Lamkin, Stanley L.

    1991-01-01

    The galactic heavy ion transport code (GCRTRN) and the nucleon transport code (BRYNTRN) are integrated into a code package (HZETRN). The code package is computer efficient and capable of operating in an engineering design environment for manned deep space mission studies. The nuclear data set used by the code is discussed including current limitations. Although the heavy ion nuclear cross sections are assumed constant, the nucleon-nuclear cross sections of BRYNTRN with full energy dependence are used. The relation of the final code to the Boltzmann equation is discussed in the context of simplifying assumptions. Error generation and propagation is discussed, and comparison is made with simplified analytic solutions to test numerical accuracy of the final results. A brief discussion of biological issues and their impact on fundamental developments in shielding technology is given.

  18. Towards a 3D Space Radiation Transport Code

    NASA Technical Reports Server (NTRS)

    Wilson, J. W.; Tripathl, R. K.; Cicomptta, F. A.; Heinbockel, J. H.; Tweed, J.

    2002-01-01

    High-speed computational procedures for space radiation shielding have relied on asymptotic expansions in terms of the off-axis scatter and replacement of the general geometry problem by a collection of flat plates. This type of solution was derived for application to human rated systems in which the radius of the shielded volume is large compared to the off-axis diffusion limiting leakage at lateral boundaries. Over the decades these computational codes are relatively complete and lateral diffusion effects are now being added. The analysis for developing a practical full 3D space shielding code is presented.

  19. 2-D numerical simulations of groundwater flow, heat transfer and 4He transport — implications for the He terrestrial budget and the mantle helium heat imbalance

    NASA Astrophysics Data System (ADS)

    Castro, Maria Clara; Patriarche, Delphine; Goblet, Patrick

    2005-09-01

    Because helium and heat production results from a common source, a continental 4He crustal flux of 4.65 * 10 - 14 mol m - 2 s - 1 has been estimated based on heat flow considerations. In addition, because the observed mantle He / heat flux ratio at the proximity of mid-ocean ridges (6.6 * 10 - 14 mol J - 1 ) is significantly lower than the radiogenic production ratio (1.5 * 10 - 12 mol J - 1 ), the presence of a terrestrial helium-heat imbalance was suggested. The latter could be explained by the presence of a layered mantle in which removal of He is impeded from the lower mantle [R.K. O'Nions, E.R. Oxburgh, Heat and helium in the Earth, Nature 306 (1983) 429-431; E.R. Oxburgh, R.K. O'Nions, Helium loss, tectonics, and the terrestrial heat budget, Science 237 (1987) 1583-1588]. van Keken et al. [P.E. van Keken, C.J. Ballentine, D. Porcelli, A dynamical investigation of the heat and helium imbalance, Earth Planet, Sci. Lett. 188 (2001) 421-434] have recently claimed that the helium-heat imbalance remains a robust observation. Such conclusions, however, were reached under the assumption that a steady-state regime was in place for both tracers and that their transport properties are similar at least in the upper portion of the crust. Here, through 2-D simulations of groundwater flow, heat transfer and 4He transport carried out simultaneously in the Carrizo aquifer and surrounding formations in southwest Texas, we assess the legitimacy of earlier assumptions. Specifically, we show that the driving transport mechanisms for He and heat are of a fundamentally different nature for a high range of permeabilities ( k ≤ 10 - 16 m 2) found in metamorphic and volcanic rocks at all depths in the crust. The assumption that transport properties for these two tracers are similar in the crust is thus unsound. We also show that total 4He / heat flux ratios lower than radiogenic production ratios do not reflect a He deficit in the crust or mantle original reservoir. Instead, they

  20. Verification of Three Dimensional Triangular Prismatic Discrete Ordinates Transport Code ENSEMBLE-TRIZ by Comparison with Monte Carlo Code GMVP

    NASA Astrophysics Data System (ADS)

    Homma, Yuto; Moriwaki, Hiroyuki; Ohki, Shigeo; Ikeda, Kazumi

    2014-06-01

    This paper deals with verification of three dimensional triangular prismatic discrete ordinates transport calculation code ENSEMBLE-TRIZ by comparison with multi-group Monte Carlo calculation code GMVP in a large fast breeder reactor. The reactor is a 750 MWe electric power sodium cooled reactor. Nuclear characteristics are calculated at beginning of cycle of an initial core and at beginning and end of cycle of equilibrium core. According to the calculations, the differences between the two methodologies are smaller than 0.0002 Δk in the multi-plication factor, relatively about 1% in the control rod reactivity, and 1% in the sodium void reactivity.

  1. A Monte Carlo Code for Relativistic Radiation Transport Around Kerr Black Holes

    NASA Technical Reports Server (NTRS)

    Schnittman, Jeremy David; Krolik, Julian H.

    2013-01-01

    We present a new code for radiation transport around Kerr black holes, including arbitrary emission and absorption mechanisms, as well as electron scattering and polarization. The code is particularly useful for analyzing accretion flows made up of optically thick disks and optically thin coronae. We give a detailed description of the methods employed in the code and also present results from a number of numerical tests to assess its accuracy and convergence.

  2. A Monte Carlo Code for Relativistic Radiation Transport around Kerr Black Holes

    NASA Astrophysics Data System (ADS)

    Schnittman, Jeremy D.; Krolik, Julian H.

    2013-11-01

    We present a new code for radiation transport around Kerr black holes, including arbitrary emission and absorption mechanisms, as well as electron scattering and polarization. The code is particularly useful for analyzing accretion flows made up of optically thick disks and optically thin coronae. We give a detailed description of the methods employed in the code and also present results from a number of numerical tests to assess its accuracy and convergence.

  3. A MONTE CARLO CODE FOR RELATIVISTIC RADIATION TRANSPORT AROUND KERR BLACK HOLES

    SciTech Connect

    Schnittman, Jeremy D.; Krolik, Julian H. E-mail: jhk@pha.jhu.edu

    2013-11-01

    We present a new code for radiation transport around Kerr black holes, including arbitrary emission and absorption mechanisms, as well as electron scattering and polarization. The code is particularly useful for analyzing accretion flows made up of optically thick disks and optically thin coronae. We give a detailed description of the methods employed in the code and also present results from a number of numerical tests to assess its accuracy and convergence.

  4. TART97 a coupled neutron-photon 3-D, combinatorial geometry Monte Carlo transport code

    SciTech Connect

    Cullen, D.E.

    1997-11-22

    TART97 is a coupled neutron-photon, 3 Dimensional, combinatorial geometry, time dependent Monte Carlo transport code. This code can on any modern computer. It is a complete system to assist you with input preparation, running Monte Carlo calculations, and analysis of output results. TART97 is also incredibly FAST; if you have used similar codes, you will be amazed at how fast this code is compared to other similar codes. Use of the entire system can save you a great deal of time and energy. TART97 is distributed on CD. This CD contains on- line documentation for all codes included in the system, the codes configured to run on a variety of computers, and many example problems that you can use to familiarize yourself with the system. TART97 completely supersedes all older versions of TART, and it is strongly recommended that users only use the most recent version of TART97 and its data riles.

  5. A predictive transport modeling code for ICRF-heated tokamaks

    SciTech Connect

    Phillips, C.K.; Hwang, D.Q. . Plasma Physics Lab.); Houlberg, W.; Attenberger, S.; Tolliver, J.; Hively, L. )

    1992-02-01

    In this report, a detailed description of the physic included in the WHIST/RAZE package as well as a few illustrative examples of the capabilities of the package will be presented. An in depth analysis of ICRF heating experiments using WHIST/RAZE will be discussed in a forthcoming report. A general overview of philosophy behind the structure of the WHIST/RAZE package, a summary of the features of the WHIST code, and a description of the interface to the RAZE subroutines are presented in section 2 of this report. Details of the physics contained in the RAZE code are examined in section 3. Sample results from the package follow in section 4, with concluding remarks and a discussion of possible improvements to the package discussed in section 5.

  6. Environmental, Transient, Three-Dimensional, Hydrothermal, Mass Transport Code - FLESCOT

    SciTech Connect

    Onishi, Yasuo; Bao, Jie; Glass, Kevin A.; Eyler, L. L.; Okumura, Masahiko

    2015-03-28

    The purpose of the project was to modify and apply the transient, three-dimensional FLESCOT code to be able to effectively simulate cesium behavior in Fukushima lakes/dam reservoirs, river mouths, and coastal areas. The ultimate objective of the FLESCOT simulation is to predict future changes of cesium accumulation in Fukushima area reservoirs and costal water. These evaluation results will assist ongoing and future environmental remediation activities and policies in a systematic and comprehensive manner.

  7. Multigroup Three-Dimensional Direct Integration Method Radiation Transport Analysis Code System.

    1987-09-18

    Version 00 TRISTAN solves the three-dimensional, fixed-source, Boltzmann transport equation for neutrons or gamma rays in rectangular geometry. The code can solve an adjoint problem as well as a usual transport problem. TRISTAN is a suitable tool to analyze radiation shielding problems such as streaming and deep penetration problems.

  8. Full 3D visualization tool-kit for Monte Carlo and deterministic transport codes

    SciTech Connect

    Frambati, S.; Frignani, M.

    2012-07-01

    We propose a package of tools capable of translating the geometric inputs and outputs of many Monte Carlo and deterministic radiation transport codes into open source file formats. These tools are aimed at bridging the gap between trusted, widely-used radiation analysis codes and very powerful, more recent and commonly used visualization software, thus supporting the design process and helping with shielding optimization. Three main lines of development were followed: mesh-based analysis of Monte Carlo codes, mesh-based analysis of deterministic codes and Monte Carlo surface meshing. The developed kit is considered a powerful and cost-effective tool in the computer-aided design for radiation transport code users of the nuclear world, and in particular in the fields of core design and radiation analysis. (authors)

  9. The TOUGH codes - a family of simulation tools for multiphase flowand transport processes in permeable media

    SciTech Connect

    Pruess, Karsten

    2003-08-08

    Numerical simulation has become a widely practiced andaccepted technique for studying flow and transport processes in thevadose zone and other subsurface flow systems. This article discusses asuite of codes, developed primarily at Lawrence Berkeley NationalLaboratory (LBNL), with the capability to model multiphase flows withphase change. We summarize history and goals in the development of theTOUGH codes, and present the governing equations for multiphase,multicomponent flow. Special emphasis is given to space discretization bymeans of integral finite differences (IFD). Issues of code implementationand architecture are addressed, as well as code applications,maintenance, and future developments.

  10. Low-discrepancy point sets in transport codes

    SciTech Connect

    Warnock, T.T.

    1985-01-01

    A drawback to Monte Carlo methods of computation is its rate of convergence. There are methods of sampling that have a better error estimate than those using random numbers. This paper gives the result of some preliminary experiments with these sampling methods on two neutron transport problems.

  11. Interfaces MATXS Cross-Section Libraries to Nuclear Transport Codes for Fusion Systems Analysis.

    1985-04-10

    Version: 00 TRANSX-CTR is a computer code that reads nuclear data from a library in MATXS format and produces transport tables with many discrete-ordinates (Sn) and diffusion codes. Tables can be produced for neutron, photon, or coupled transport. Options include adjoint tables, mixtures, self-shielding, group collapse, homogenization, thermal upscatter, prompt or steady-state fission, transport corrections, elastic removal corrections, and flexible response-function edits. The ability to prepare coupled tables and response edits for heating, damage, gasmore » production, and delayed activity makes TRANSX-CTR especially useful for fusion reactor studies.« less

  12. Intact coding region of the serotonin transporter gene in obsessive-compulsive disorder

    SciTech Connect

    Altemus, M.; Murphy, D.L.; Greenberg, B.; Lesch, K.P.

    1996-07-26

    Epidemiologic studies indicate that obsessive-compulsive disorder is genetically transmitted in some families, although no genetic abnormalities have been identified in individuals with this disorder. The selective response of obsessive-compulsive disorder to treatment with agents which block serotonin reuptake suggests the gene coding for the serotonin transporter as a candidate gene. The primary structure of the serotonin-transporter coding region was sequenced in 22 patients with obsessive-compulsive disorder, using direct PCR sequencing of cDNA synthesized from platelet serotonin-transporter mRNA. No variations in amino acid sequence were found among the obsessive-compulsive disorder patients or healthy controls. These results do not support a role for alteration in the primary structure of the coding region of the serotonin-transporter gene in the pathogenesis of obsessive-compulsive disorder. 27 refs.

  13. MHD stability module for the National Transport Code Collaboration Library

    NASA Astrophysics Data System (ADS)

    Pletzer, A.; Manickam, J.; Jardin, S. C.; McCune, D.; Ludescher, Ch.; Klasky, S.; Randerson, L.

    1999-11-01

    There is a need to provide numerical tools to the fusion community that are robust, portable, easy to use, documented, and reviewed by independent peers. A web site (http://w3.pppl.gov/NTCC) where modules can be freely downloaded has been set up for that purpose [Status of the NTCC Modules Library (D McCune)]. The existence of such a library is in addition motivated by the increasing demand for programs that can be plugged into large packages with minimal effort. In particular, there has been some requests to make MHD stability codes such as the PEST, which are capable of simulating large scale plasma phenomena, available at the NTCC module library. Progress on the work to convert PEST to satisfy the NTCC module standards is presented. The resulting, new PEST interface is a collection of subroutines, which initialize, modify and extract data. Dynamic memory allocation is introduced to minimize memory requirements and allow for multiple runs. Embedded graphics routines are disabled and dependence on native binary files replaced by portable NetCDF files. To illustrate the flexibility of the module approach, numerical results obtained by integrating PEST-3, the mapping code DMAP and the equilibrium JSOLVER modules into a C++ and Java environment with remote database connectivity are presented.

  14. Code System to Calculate Tornado-Induced Flow Material Transport.

    SciTech Connect

    ANDRAE, R. W.

    1999-11-18

    Version: 00 TORAC models tornado-induced flows, pressures, and material transport within structures. Its use is directed toward nuclear fuel cycle facilities and their primary release pathway, the ventilation system. However, it is applicable to other structures and can model other airflow pathways within a facility. In a nuclear facility, this network system could include process cells, canyons, laboratory offices, corridors, and offgas systems. TORAC predicts flow through a network system that also includes ventilation system components such as filters, dampers, ducts, and blowers. These ventilation system components are connected to the rooms and corridors of the facility to form a complete network for moving air through the structure and, perhaps, maintaining pressure levels in certain areas. The material transport capability in TORAC is very basic and includes convection, depletion, entrainment, and filtration of material.

  15. Code System to Calculate Particle Penetration Through Aerosol Transport Lines.

    1999-07-14

    Version 00 Distribution is restricted to US Government Agencies and Their Contractors Only. DEPOSITION1.03 is an interactive software program which was developed for the design and analysis of aerosol transport lines. Models are presented for calculating aerosol particle penetration through straight tubes of arbitrary orientation, inlets, and elbows. An expression to calculate effective depositional velocities of particles on tube walls is derived. The concept of maximum penetration is introduced, which is the maximum possible penetrationmore » through a sampling line connecting any two points in a three-dimensional space. A procedure to predict optimum tube diameter for an existing transport line is developed. Note that there is a discrepancy in this package which includes the DEPOSITION 1.03 executable and the DEPOSITION 2.0 report. RSICC was unable to obtain other executables or reports.« less

  16. Code System to Calculate Tornado-Induced Flow Material Transport.

    1999-11-18

    Version: 00 TORAC models tornado-induced flows, pressures, and material transport within structures. Its use is directed toward nuclear fuel cycle facilities and their primary release pathway, the ventilation system. However, it is applicable to other structures and can model other airflow pathways within a facility. In a nuclear facility, this network system could include process cells, canyons, laboratory offices, corridors, and offgas systems. TORAC predicts flow through a network system that also includes ventilation systemmore » components such as filters, dampers, ducts, and blowers. These ventilation system components are connected to the rooms and corridors of the facility to form a complete network for moving air through the structure and, perhaps, maintaining pressure levels in certain areas. The material transport capability in TORAC is very basic and includes convection, depletion, entrainment, and filtration of material.« less

  17. Transport Corrections in Nodal Diffusion Codes for HTR Modeling

    SciTech Connect

    Abderrafi M. Ougouag; Frederick N. Gleicher

    2010-08-01

    The cores and reflectors of High Temperature Reactors (HTRs) of the Next Generation Nuclear Plant (NGNP) type are dominantly diffusive media from the point of view of behavior of the neutrons and their migration between the various structures of the reactor. This means that neutron diffusion theory is sufficient for modeling most features of such reactors and transport theory may not be needed for most applications. Of course, the above statement assumes the availability of homogenized diffusion theory data. The statement is true for most situations but not all. Two features of NGNP-type HTRs require that the diffusion theory-based solution be corrected for local transport effects. These two cases are the treatment of burnable poisons (BP) in the case of the prismatic block reactors and, for both pebble bed reactor (PBR) and prismatic block reactor (PMR) designs, that of control rods (CR) embedded in non-multiplying regions near the interface between fueled zones and said non-multiplying zones. The need for transport correction arises because diffusion theory-based solutions appear not to provide sufficient fidelity in these situations.

  18. RISKIND: An enhanced computer code for National Environmental Policy Act transportation consequence analysis

    SciTech Connect

    Biwer, B.M.; LePoire, D.J.; Chen, S.Y.

    1996-03-01

    The RISKIND computer program was developed for the analysis of radiological consequences and health risks to individuals and the collective population from exposures associated with the transportation of spent nuclear fuel (SNF) or other radioactive materials. The code is intended to provide scenario-specific analyses when evaluating alternatives for environmental assessment activities, including those for major federal actions involving radioactive material transport as required by the National Environmental Policy Act (NEPA). As such, rigorous procedures have been implemented to enhance the code`s credibility and strenuous efforts have been made to enhance ease of use of the code. To increase the code`s reliability and credibility, a new version of RISKIND was produced under a quality assurance plan that covered code development and testing, and a peer review process was conducted. During development of the new version, the flexibility and ease of use of RISKIND were enhanced through several major changes: (1) a Windows{sup {trademark}} point-and-click interface replaced the old DOS menu system, (2) the remaining model input parameters were added to the interface, (3) databases were updated, (4) the program output was revised, and (5) on-line help has been added. RISKIND has been well received by users and has been established as a key component in radiological transportation risk assessments through its acceptance by the U.S. Department of Energy community in recent environmental impact statements (EISs) and its continued use in the current preparation of several EISs.

  19. Coding scheme for wireless video transport with reduced frame skipping

    NASA Astrophysics Data System (ADS)

    Aramvith, Supavadee; Sun, Ming-Ting

    2000-05-01

    We investigate the scenario of using the Automatic Repeat reQuest (ARQ) retransmission scheme for two-way low bit-rate video communications over wireless Rayleigh fading channels. We show that during the retransmission of error packets, due to the reduced channel throughput, the video encoder buffer may fill-up quickly and cause the TMN8 rate-control algorithm to significantly reduce the bits allocated to each video frame. This results in Peak Signal-to-Noise Ratio (PSNR) degradation and many skipper frames. To reduce the number of frames skipped, in this paper we propose a coding scheme which takes into consideration the effects of the video buffer fill-up, an a priori channel model, the channel feedback information, and hybrid ARQ/FEC. The simulation results indicate that our proposed scheme encode the video sequences with much fewer frame skipping and with higher PSNR compared to H.263 TMN8.

  20. METHES: A Monte Carlo collision code for the simulation of electron transport in low temperature plasmas

    NASA Astrophysics Data System (ADS)

    Rabie, M.; Franck, C. M.

    2016-06-01

    We present a freely available MATLAB code for the simulation of electron transport in arbitrary gas mixtures in the presence of uniform electric fields. For steady-state electron transport, the program provides the transport coefficients, reaction rates and the electron energy distribution function. The program uses established Monte Carlo techniques and is compatible with the electron scattering cross section files from the open-access Plasma Data Exchange Project LXCat. The code is written in object-oriented design, allowing the tracing and visualization of the spatiotemporal evolution of electron swarms and the temporal development of the mean energy and the electron number due to attachment and/or ionization processes. We benchmark our code with well-known model gases as well as the real gases argon, N2, O2, CF4, SF6 and mixtures of N2 and O2.

  1. Carrier transport in dichromatic color-coded semipolar (2021) and (2021) III-N LEDs

    NASA Astrophysics Data System (ADS)

    Kisin, Mikhail V.; Huang, Chih-Li; El-Ghoroury, Hussein S.

    2014-03-01

    Simulation of III-nitride color-coded multiple quantum well (MQW) LED structures was performed using as an experimental benchmark dichromatic semipolar LEDs grown in Ga-polar and N-polar crystallographic orientations (Y. Kawaguchi et.al, APL 100, 231110, 2012). Different QW depths in the color-coded LEDs and opposite interface polarization charges in Ga-polar and N-polar structures provide different conditions for carrier transport across the LED active regions. Combination of several effects was crucial for adequate reproduction of the emission spectra experimentally observed in color-coded structures with violet-aquamarine and aquamarine-violet active region layouts. A standard drift-diffusion transport model wascompleted with rate equations for nonequilibrium QW populations and several high-energy transport features, including the effects of QW carrier overshoot and Auger-assisted QW depopulation. COMSOL-based Optoelectronic Device Modeling Software (ODMS) developed at Ostendo Technologies Inc. was utilized for device simulation.

  2. Radiation transport phenomena and modeling. Part A: Codes; Part B: Applications with examples

    SciTech Connect

    Lorence, L.J. Jr.; Beutler, D.E.

    1997-09-01

    This report contains the notes from the second session of the 1997 IEEE Nuclear and Space Radiation Effects Conference Short Course on Applying Computer Simulation Tools to Radiation Effects Problems. Part A discusses the physical phenomena modeled in radiation transport codes and various types of algorithmic implementations. Part B gives examples of how these codes can be used to design experiments whose results can be easily analyzed and describes how to calculate quantities of interest for electronic devices.

  3. A General-Purpose Monte Carlo Gamma-Ray Transport Code System for Minicomputers.

    1981-08-27

    Version 00 The OGRE code system was designed to calculate, by Monte Carlo methods, any quantity related to gamma-ray transport. The system is represented by two codes which treat slab geometry. OGRE-P1 computes the dose on one side of a slab for a source on the other side, and HOTONE computes energy deposition in addition. The source may be monodirectional, isotropic, or cosine distributed.

  4. Mesh generation and energy group condensation studies for the jaguar deterministic transport code

    SciTech Connect

    Kennedy, R. A.; Watson, A. M.; Iwueke, C. I.; Edwards, E. J.

    2012-07-01

    The deterministic transport code Jaguar is introduced, and the modeling process for Jaguar is demonstrated using a two-dimensional assembly model of the Hoogenboom-Martin Performance Benchmark Problem. This single assembly model is being used to test and analyze optimal modeling methodologies and techniques for Jaguar. This paper focuses on spatial mesh generation and energy condensation techniques. In this summary, the models and processes are defined as well as thermal flux solution comparisons with the Monte Carlo code MC21. (authors)

  5. A Modular Computer Code for Simulating Reactive Multi-Species Transport in 3-Dimensional Groundwater Systems

    SciTech Connect

    TP Clement

    1999-06-24

    RT3DV1 (Reactive Transport in 3-Dimensions) is computer code that solves the coupled partial differential equations that describe reactive-flow and transport of multiple mobile and/or immobile species in three-dimensional saturated groundwater systems. RT3D is a generalized multi-species version of the US Environmental Protection Agency (EPA) transport code, MT3D (Zheng, 1990). The current version of RT3D uses the advection and dispersion solvers from the DOD-1.5 (1997) version of MT3D. As with MT3D, RT3D also requires the groundwater flow code MODFLOW for computing spatial and temporal variations in groundwater head distribution. The RT3D code was originally developed to support the contaminant transport modeling efforts at natural attenuation demonstration sites. As a research tool, RT3D has also been used to model several laboratory and pilot-scale active bioremediation experiments. The performance of RT3D has been validated by comparing the code results against various numerical and analytical solutions. The code is currently being used to model field-scale natural attenuation at multiple sites. The RT3D code is unique in that it includes an implicit reaction solver that makes the code sufficiently flexible for simulating various types of chemical and microbial reaction kinetics. RT3D V1.0 supports seven pre-programmed reaction modules that can be used to simulate different types of reactive contaminants including benzene-toluene-xylene mixtures (BTEX), and chlorinated solvents such as tetrachloroethene (PCE) and trichloroethene (TCE). In addition, RT3D has a user-defined reaction option that can be used to simulate any other types of user-specified reactive transport systems. This report describes the mathematical details of the RT3D computer code and its input/output data structure. It is assumed that the user is familiar with the basics of groundwater flow and contaminant transport mechanics. In addition, RT3D users are expected to have some experience in

  6. A fast Monte Carlo code for proton transport in radiation therapy based on MCNPX

    PubMed Central

    Jabbari, Keyvan; Seuntjens, Jan

    2014-01-01

    An important requirement for proton therapy is a software for dose calculation. Monte Carlo is the most accurate method for dose calculation, but it is very slow. In this work, a method is developed to improve the speed of dose calculation. The method is based on pre-generated tracks for particle transport. The MCNPX code has been used for generation of tracks. A set of data including the track of the particle was produced in each particular material (water, air, lung tissue, bone, and soft tissue). This code can transport protons in wide range of energies (up to 200 MeV for proton). The validity of the fast Monte Carlo (MC) code is evaluated with data MCNPX as a reference code. While analytical pencil beam algorithm transport shows great errors (up to 10%) near small high density heterogeneities, there was less than 2% deviation of MCNPX results in our dose calculation and isodose distribution. In terms of speed, the code runs 200 times faster than MCNPX. In the Fast MC code which is developed in this work, it takes the system less than 2 minutes to calculate dose for 106 particles in an Intel Core 2 Duo 2.66 GHZ desktop computer. PMID:25190994

  7. ITS Version 6 : the integrated TIGER series of coupled electron/photon Monte Carlo transport codes.

    SciTech Connect

    Franke, Brian Claude; Kensek, Ronald Patrick; Laub, Thomas William

    2008-04-01

    ITS is a powerful and user-friendly software package permitting state-of-the-art Monte Carlo solution of lineartime-independent coupled electron/photon radiation transport problems, with or without the presence of macroscopic electric and magnetic fields of arbitrary spatial dependence. Our goal has been to simultaneously maximize operational simplicity and physical accuracy. Through a set of preprocessor directives, the user selects one of the many ITS codes. The ease with which the makefile system is applied combines with an input scheme based on order-independent descriptive keywords that makes maximum use of defaults and internal error checking to provide experimentalists and theorists alike with a method for the routine but rigorous solution of sophisticated radiation transport problems. Physical rigor is provided by employing accurate cross sections, sampling distributions, and physical models for describing the production and transport of the electron/photon cascade from 1.0 GeV down to 1.0 keV. The availability of source code permits the more sophisticated user to tailor the codes to specific applications and to extend the capabilities of the codes to more complex applications. Version 6, the latest version of ITS, contains (1) improvements to the ITS 5.0 codes, and (2) conversion to Fortran 90. The general user friendliness of the software has been enhanced through memory allocation to reduce the need for users to modify and recompile the code.

  8. Prospect on the Atomic and Molecular Processes in Plasmas 4. Transport Code 4.1 Radiation Transport Code

    NASA Astrophysics Data System (ADS)

    Takabe, Hideaki

    A brief review is given of the physics of radiation transport, a topic that is important in the study of astrophysics, laser-plasmas, divertor-plasmas, etc. In general, we must solve non-local thermodynamic equilibrium processes using an appropriate atomic model. The resultant data related to the spectral emissivity and opacity of partially ionized plasmas are then used to solve the radiation transfer equation. In this note, I briefly overview a variety of ways to carry out such a calculation. In addition, similarities and differences in the physical process between laser-plasmas and divertor-plasmas are briefly described.

  9. Some Examples of the Application and Validation of the NUFT Subsurface Flow and Transport Code

    SciTech Connect

    Nitao, J J

    2001-08-01

    This report was written as partial fulfillment of a subcontract from DOD/DOE Strategic Environmental Research and Development Program (SERDP) as part of a project directed by the U.S. Army Engineer Research and Development Center, Waterways Experiment Station (WES), Vicksburg, Mississippi. The report documents examples of field validation of the Non-isothermal Unsaturated-saturated Flow and Transport model (NUFT) code for environmental remediation, with emphasis on soil vapor extraction, and describes some of the modifications needed to integrate the code into the DOD Groundwater Modeling System (GMS, 2000). Note that this report highlights only a subset of the full capabilities of the NUFT code.

  10. Effects of polymorphisms in CYP2D6 and ABC transporters and side effects induced by gefitinib on the pharmacokinetics of the gefitinib metabolite, O-desmethyl gefitinib.

    PubMed

    Kobayashi, Hiroyuki; Sato, Kazuhiro; Niioka, Takenori; Takeda, Masahide; Okuda, Yuji; Asano, Mariko; Ito, Hiroshi; Miura, Masatomo

    2016-06-01

    We investigated the effects of polymorphisms in CYP2D6, ABCB1, and ABCG2 and the side effects induced by gefitinib on the pharmacokinetics of O-desmethyl gefitinib, the active metabolite of gefitinib. On day 14 after beginning therapy with gefitinib, plasma concentrations of gefitinib and O-desmethyl gefitinib were measured. Patients were grouped into three groups according to their combination of CYP2D6 alleles: homozygous extensive metabolisers (EMs; *1/*1, *1/*2, and *2/*2; n = 13), heterozygous EMs (*1/*5, *2/*5, *1/*10, and *2/*10; n = 18), and intermediate metabolisers (IMs; *5/*10 and *10/*10; n = 5). The median AUC0-24 of O-desmethyl gefitinib in CYP2D6 IMs was 1460 ng h/mL, whereas that in homozygous EMs was 12,523 ng h/mL (P = 0.021 in univariate analysis). The median AUC ratio of O-desmethyl gefitinib to gefitinib differed among homozygous EMs, heterozygous EMs, and IMs at a ratio of 1.41:0.86:0.24 (P = 0.030). On the other hand, there were no significant differences in the AUC0-24 of O-desmethyl gefitinib between ABCB1 and ABCG2 genotypes. In a multivariate analysis, CYP2D6 homozygous EMs (P = 0.012) were predictive for a higher AUC0-24 of O-desmethyl gefitinib. The side effects of diarrhoea, skin rash, and hepatotoxicity induced by gefitinib were unrelated to the AUC0-24 of O-desmethyl gefitinib. CYP2D6 polymorphisms were associated with the formation of O-desmethyl gefitinib from gefitinib. In CYP2D6 homozygous EMs, the plasma concentrations of O-desmethyl gefitinib were higher over 24 h after taking gefitinib than those of the parent compound; however, side effects induced by gefitinib were unrelated to O-desmethyl gefitinib exposure. PMID:27154635

  11. A portable, parallel, object-oriented Monte Carlo neutron transport code in C++

    SciTech Connect

    Lee, S.R.; Cummings, J.C.; Nolen, S.D. |

    1997-05-01

    We have developed a multi-group Monte Carlo neutron transport code using C++ and the Parallel Object-Oriented Methods and Applications (POOMA) class library. This transport code, called MC++, currently computes k and {alpha}-eigenvalues and is portable to and runs parallel on a wide variety of platforms, including MPPs, clustered SMPs, and individual workstations. It contains appropriate classes and abstractions for particle transport and, through the use of POOMA, for portable parallelism. Current capabilities of MC++ are discussed, along with physics and performance results on a variety of hardware, including all Accelerated Strategic Computing Initiative (ASCI) hardware. Current parallel performance indicates the ability to compute {alpha}-eigenvalues in seconds to minutes rather than hours to days. Future plans and the implementation of a general transport physics framework are also discussed.

  12. Applications of the COG multiparticle Monte Carlo transport code to simulated imaging of complex objects

    SciTech Connect

    Buck, R M; Hall, J M

    1999-06-01

    COG is a major multiparticle simulation code in the LLNL Monte Carlo radiation transport toolkit. It was designed to solve deep-penetration radiation shielding problems in arbitrarily complex 3D geometries, involving coupled transport of photons, neutrons, and electrons. COG was written to provide as much accuracy as the underlying cross-sections will allow, and has a number of variance-reduction features to speed computations. Recently COG has been applied to the simulation of high- resolution radiographs of complex objects and the evaluation of contraband detection schemes. In this paper we will give a brief description of the capabilities of the COG transport code and show several examples of neutron and gamma-ray imaging simulations. Keywords: Monte Carlo, radiation transport, simulated radiography, nonintrusive inspection, neutron imaging.

  13. 3D Neutron Transport PWR Full-core Calculation with RMC code

    NASA Astrophysics Data System (ADS)

    Qiu, Yishu; She, Ding; Fan, Xiao; Wang, Kan; Li, Zeguang; Liang, Jingang; Leroyer, Hadrien

    2014-06-01

    Nowadays, there are more and more interests in the use of Monte Carlo codes to calculate the detailed power density distributions in full-core reactors. With the Inspur TS1000 HPC Server of Tsinghua University, several calculations have been done based on the EDF 3D Neutron Transport PWR Full-core benchmark through large-scale parallelism. To investigate and compare the results of the deterministic method and Monte Carlo method, EDF R&D and Department of Engineering Physics of Tsinghua University are having a collaboration to make code to code verification. So in this paper, two codes are used. One is the code COCAGNE developed by the EDF R&D, a deterministic core code, and the other is the Monte Carlo code RMC developed by Department of Engineering Physics in Tsinghua University. First, the full-core model is described and a 26-group calculation was performed by these two codes using the same 26-group cross-section library provided by EDF R&D. Then the parallel and tally performance of RMC is discussed. RMC employs a novel algorithm which can cut down most of the communications. It can be seen clearly that the speedup ratio almost linearly increases with the nodes. Furthermore the cell-mapping method applied by RMC consumes little time to tally even millions of cells. The results of the codes COCAGNE and RMC are compared in three ways. The results of these two codes agree well with each other. It can be concluded that both COCAGNE and RMC are able to provide 3D-transport solutions associated with detailed power density distributions calculation in PWR full-core reactors. Finally, to investigate how many histories are needed to obtain a given standard deviation for a full 3D solution, the non-symmetrized condensed 2-group fluxes of RMC are discussed.

  14. Modification of the finite element heat and mass transfer code (FEHMN) to model multicomponent reactive transport

    SciTech Connect

    Viswanathan, H.S.

    1995-12-31

    The finite element code FEHMN is a three-dimensional finite element heat and mass transport simulator that can handle complex stratigraphy and nonlinear processes such as vadose zone flow, heat flow and solute transport. Scientists at LANL have been developed hydrologic flow and transport models of the Yucca Mountain site using FEHMN. Previous FEHMN simulations have used an equivalent K{sub d} model to model solute transport. In this thesis, FEHMN is modified making it possible to simulate the transport of a species with a rigorous chemical model. Including the rigorous chemical equations into FEHMN simulations should provide for more representative transport models for highly reactive chemical species. A fully kinetic formulation is chosen for the FEHMN reactive transport model. Several methods are available to computationally implement a fully kinetic formulation. Different numerical algorithms are investigated in order to optimize computational efficiency and memory requirements of the reactive transport model. The best algorithm of those investigated is then incorporated into FEHMN. The algorithm chosen requires for the user to place strongly coupled species into groups which are then solved for simultaneously using FEHMN. The complete reactive transport model is verified over a wide variety of problems and is shown to be working properly. The simulations demonstrate that gas flow and carbonate chemistry can significantly affect {sup 14}C transport at Yucca Mountain. The simulations also provide that the new capabilities of FEHMN can be used to refine and buttress already existing Yucca Mountain radionuclide transport studies.

  15. Transport code for radiocolloid migration: with an assessment of an actual low-level waste site

    SciTech Connect

    Travis, B.J.; Nuttall, H.E.

    1984-12-31

    Recently, there is increased concern that radiocolloids may act as a rapid transport mechanism for the release of radionuclides from high-level waste repositories. The role of colloids is, however, controversial because the necessary data and assessment methodology have been limited. Evidence is accumulating to indicate that colloids are an important consideration in the geological disposal of nuclear waste. To quantitatively assess the role of colloids, the TRACR3D transport code has been enhanced by the addition of the population balance equations. This new version of the code can simulate the migration of colloids through combinations of porous/fractured, unsaturated, geologic media. The code was tested against the experimental laboratory column data of Avogadro et al. in order to compare the code results to both experimental data and an analytical solution. Next, a low-level radioactive waste site was investigated to explore whether colloid migration could account for the unusually rapid and long transport of plutonium and americium observed at a low-level waste site. Both plutonium and americium migrated 30 meters through unsaturated volcanic tuff. The nature and modeling of radiocolloids are discussed along with site simulation results from the TRACR3D code. 20 references.

  16. ATTILA: A three-dimensional, unstructured tetrahedral mesh discrete ordinates transport code

    SciTech Connect

    Wareing, T.A.; McGhee, J.M.; Morel, J.E.

    1996-12-31

    Many applications of radiation transport require the accurate modeling of complex three-dimensional geometries. Historically, Monte Carlo codes have been used for such applications. Existing deterministic transport codes were not applied to such problems because of the difficulties of modeling complex three-dimensional geometries with rectangular meshes. The authors have developed a three-dimensional discrete ordinates (S{sub n}) code, ATTILA, which uses linear-discontinuous finite element spatial differencing in conjunction with diffusion-synthetic acceleration (DSA) on an unstructured tetrahedral mesh. This tetrahedral mesh capability enables the authors to efficiently model complex three-dimensional geometries. One interesting and challenging application of neutron and/or gamma-ray transport is nuclear well-logging applications. Nuclear well-logging problems usually involve a complex geometry with fixed sources and one or more detectors. Detector responses must generally be accurate to within {approx}1%. The combination of complex three-dimensional geometries and high accuracy requirements makes it difficult to perform logging problems with traditional S{sub n} differencing schemes and rectangular meshes. Hence, it is not surprising that deterministic S{sub n} codes have seen limited use in nuclear well-logging applications. The geometric modeling capabilities and the advanced spatial differencing of ATTILA give it a significant advantage, relative to traditional S{sub n} codes, for performing nuclear well-logging calculations.

  17. VAM2D: Variably saturated analysis model in two dimensions

    SciTech Connect

    Huyakorn, P.S.; Kool, J.B.; Wu, Y.S. )

    1991-10-01

    This report documents a two-dimensional finite element model, VAM2D, developed to simulate water flow and solute transport in variably saturated porous media. Both flow and transport simulation can be handled concurrently or sequentially. The formulation of the governing equations and the numerical procedures used in the code are presented. The flow equation is approximated using the Galerkin finite element method. Nonlinear soil moisture characteristics and atmospheric boundary conditions (e.g., infiltration, evaporation and seepage face), are treated using Picard and Newton-Raphson iterations. Hysteresis effects and anisotropy in the unsaturated hydraulic conductivity can be taken into account if needed. The contaminant transport simulation can account for advection, hydrodynamic dispersion, linear equilibrium sorption, and first-order degradation. Transport of a single component or a multi-component decay chain can be handled. The transport equation is approximated using an upstream weighted residual method. Several test problems are presented to verify the code and demonstrate its utility. These problems range from simple one-dimensional to complex two-dimensional and axisymmetric problems. This document has been produced as a user's manual. It contains detailed information on the code structure along with instructions for input data preparation and sample input and printed output for selected test problems. Also included are instructions for job set up and restarting procedures. 44 refs., 54 figs., 24 tabs.

  18. Benchmarking Space Radiation Transport Codes Using Measured LET Spectra from the Crater Instrument on LRO

    NASA Astrophysics Data System (ADS)

    Townsend, L. W.; Porter, J.; Spence, H. E.; Golightly, M. J.; Smith, S. S.; Schwadron, N.; Kasper, J. C.; Case, A. W.; Blake, J. B.; Mazur, J. E.; Looper, M. D.; Zeitlin, C. J.

    2014-12-01

    The Cosmic Ray Telescope for the Effects of Radiation (CRaTER) instrument on the Lunar Reconnaissance Orbiter (LRO) spacecraft measures the energy depositions by solar and galactic cosmic radiations in its silicon detectors. These energy depositions are converted to linear energy transfer (LET) spectra, which can contribute to benchmarking space radiation transport codes and also used to estimate doses for the Lunar environment. In this work the Monte Carlo transport code HETC-HEDS (High Energy Transport Code - Human Exploration and Development in Space) and the deterministic NASA space radiation transport code HZETRN2010 are used to estimate LET and dose contributions from the incident primary ions and their charged secondaries produced in nuclear collisions within the components of the CRaTER instrument. Comparisons of the calculated LET spectra with measurements of LET from the CRaTER instrument are made and clearly show the importance of including corrections to the calculated average energy deposition spectra in the silicon detectors using a Vavilov distribution function.

  19. SQA of finite element method (FEM) codes used for analyses of pit storage/transport packages

    SciTech Connect

    Russel, E.

    1997-11-01

    This report contains viewgraphs on the software quality assurance of finite element method codes used for analyses of pit storage and transport projects. This methodology utilizes the ISO 9000-3: Guideline for application of 9001 to the development, supply, and maintenance of software, for establishing well-defined software engineering processes to consistently maintain high quality management approaches.

  20. Comparison of Transport Codes, HZETRN, HETC and FLUKA, Using 1977 GCR Solar Minimum Spectra

    NASA Technical Reports Server (NTRS)

    Heinbockel, John H.; Slaba, Tony C.; Tripathi, Ram K.; Blattnig, Steve R.; Norbury, John W.; Badavi, Francis F.; Townsend, Lawrence W.; Handler, Thomas; Gabriel, Tony A.; Pinsky, Lawrence S.; Reddell, Brandon; Aumann, Aric R.

    2009-01-01

    The HZETRN deterministic radiation transport code is one of several tools developed to analyze the effects of harmful galactic cosmic rays (GCR) and solar particle events (SPE) on mission planning, astronaut shielding and instrumentation. This paper is a comparison study involving the two Monte Carlo transport codes, HETC-HEDS and FLUKA, and the deterministic transport code, HZETRN. Each code is used to transport ions from the 1977 solar minimum GCR spectrum impinging upon a 20 g/cm2 Aluminum slab followed by a 30 g/cm2 water slab. This research is part of a systematic effort of verification and validation to quantify the accuracy of HZETRN and determine areas where it can be improved. Comparisons of dose and dose equivalent values at various depths in the water slab are presented in this report. This is followed by a comparison of the proton fluxes, and the forward, backward and total neutron fluxes at various depths in the water slab. Comparisons of the secondary light ion 2H, 3H, 3He and 4He fluxes are also examined.

  1. A transport based one-dimensional perturbation code for reactivity calculations in metal systems

    SciTech Connect

    Wenz, T.R.

    1995-02-01

    A one-dimensional reactivity calculation code is developed using first order perturbation theory. The reactivity equation is based on the multi-group transport equation using the discrete ordinates method for angular dependence. In addition to the first order perturbation approximations, the reactivity code uses only the isotropic scattering data, but cross section libraries with higher order scattering data can still be used with this code. The reactivity code obtains all the flux, cross section, and geometry data from the standard interface files created by ONEDANT, a discrete ordinates transport code. Comparisons between calculated and experimental reactivities were done with the central reactivity worth data for Lady Godiva, a bare uranium metal assembly. Good agreement is found for isotopes that do not violate the assumptions in the first order approximation. In general for cases where there are large discrepancies, the discretized cross section data is not accurately representing certain resonance regions that coincide with dominant flux groups in the Godiva assembly. Comparing reactivities calculated with first order perturbation theory and a straight {Delta}k/k calculation shows agreement within 10% indicating the perturbation of the calculated fluxes is small enough for first order perturbation theory to be applicable in the modeled system. Computation time comparisons between reactivities calculated with first order perturbation theory and straight {Delta}k/k calculations indicate considerable time can be saved performing a calculation with a perturbation code particularly as the complexity of the modeled problems increase.

  2. Towards a heavy-ion transport capability in the MARS15 Code

    SciTech Connect

    Mokhov, N. V.; Gudima, K. K.; Mashnik, S. G.; Rakhno, I. L.; Striganov, S.

    2004-04-01

    In order to meet the challenges of new accelerator and space projects and further improve modelling of radiation effects in microscopic objects, heavy-ion interaction and transport physics have been recently incorporated into the MARS15 Monte Carlo code. A brief description of new modules is given in comparison with experimental data. The MARS Monte Carlo code is widely used in numerous accelerator, detector, shielding and cosmic ray applications. The needs of the Relativistic Heavy-Ion Collider, Large Hadron Collider, Rare Isotope Accelerator and NASA projects have recently induced adding heavy-ion interaction and transport physics to the MARS15 code. The key modules of the new implementation are described below along with their comparisons to experimental data.

  3. Code System to Solve for Release and Transport of Contaminants through Saturated/Unsaturated Media.

    1996-03-07

    The BLT code solves for release and transport of contaminants from containerized wastes. Each container may have unique properties (i.e., time to failure or localized failure, e.g. pitting) and each waste form may have unique release properties. Release from the waste form is limited by one of four physical or chemical constraints: solubility, diffusion, dissolution, and surface wash-off with partitioning. The release from the waste form acts as a source for transport in the advection/dispersionmore » equation. Transport is modeled in two-dimensions through the groundwater pathway from subsurface disposal.« less

  4. On the Development of a Deterministic Three-Dimensional Radiation Transport Code

    NASA Technical Reports Server (NTRS)

    Rockell, Candice; Tweed, John

    2011-01-01

    Since astronauts on future deep space missions will be exposed to dangerous radiations, there is a need to accurately model the transport of radiation through shielding materials and to estimate the received radiation dose. In response to this need a three dimensional deterministic code for space radiation transport is now under development. The new code GRNTRN is based on a Green's function solution of the Boltzmann transport equation that is constructed in the form of a Neumann series. Analytical approximations will be obtained for the first three terms of the Neumann series and the remainder will be estimated by a non-perturbative technique . This work discusses progress made to date and exhibits some computations based on the first two Neumann series terms.

  5. Open-Source Development of the Petascale Reactive Flow and Transport Code PFLOTRAN

    NASA Astrophysics Data System (ADS)

    Hammond, G. E.; Andre, B.; Bisht, G.; Johnson, T.; Karra, S.; Lichtner, P. C.; Mills, R. T.

    2013-12-01

    Open-source software development has become increasingly popular in recent years. Open-source encourages collaborative and transparent software development and promotes unlimited free redistribution of source code to the public. Open-source development is good for science as it reveals implementation details that are critical to scientific reproducibility, but generally excluded from journal publications. In addition, research funds that would have been spent on licensing fees can be redirected to code development that benefits more scientists. In 2006, the developers of PFLOTRAN open-sourced their code under the U.S. Department of Energy SciDAC-II program. Since that time, the code has gained popularity among code developers and users from around the world seeking to employ PFLOTRAN to simulate thermal, hydraulic, mechanical and biogeochemical processes in the Earth's surface/subsurface environment. PFLOTRAN is a massively-parallel subsurface reactive multiphase flow and transport simulator designed from the ground up to run efficiently on computing platforms ranging from the laptop to leadership-class supercomputers, all from a single code base. The code employs domain decomposition for parallelism and is founded upon the well-established and open-source parallel PETSc and HDF5 frameworks. PFLOTRAN leverages modern Fortran (i.e. Fortran 2003-2008) in its extensible object-oriented design. The use of this progressive, yet domain-friendly programming language has greatly facilitated collaboration in the code's software development. Over the past year, PFLOTRAN's top-level data structures were refactored as Fortran classes (i.e. extendible derived types) to improve the flexibility of the code, ease the addition of new process models, and enable coupling to external simulators. For instance, PFLOTRAN has been coupled to the parallel electrical resistivity tomography code E4D to enable hydrogeophysical inversion while the same code base can be used as a third

  6. Calculations of fast electron transport through different materials at solid density using a robust hybrid code

    NASA Astrophysics Data System (ADS)

    Hughes, Steve; Chapman, David

    2009-11-01

    Development of a robust hybrid code is useful for efficient calculation of fast electron transport, in conjunction with a radiation hydrodynamics code. The code THOR has been developed for coupling to a fluid code in this fashion for modelling this fast electron population generated during short-pulse laser experiments. It is built on the hybrid philosophy of work by J.R. Davies, which provides an intuitive and relatively straightforward computational framework, and makes it easier to take advantage of parallelism for reducing noise in the solution. The basic algorithms of the code are described along with the approximations and limitations of the current implementation. Recent experiments by D. Hoarty at AWE have demonstrated a method of heating solid density Aluminium layers to hundreds of eV, buried at various depths in a plastic target. Application of the THOR code in reproducing these measurements is shown with encouraging results. The quality of the match to the data is discussed with layers placed at various depths as in the experiments, and with different laser sources. The problems of comparing the code outputs with the measurement technique used in the experiment are also described.

  7. A Coupled Neutron-Photon 3-D Combinatorial Geometry Monte Carlo Transport Code

    1998-06-12

    TART97 is a coupled neutron-photon, 3 dimensional, combinatorial geometry, time dependent Monte Carlo transport code. This code can run on any modern computer. It is a complete system to assist you with input preparation, running Monte Carlo calculations, and analysis of output results. TART97 is also incredibly fast: if you have used similar codes, you will be amazed at how fast this code is compared to other similar codes. Use of the entire system canmore » save you a great deal of time and energy. TART 97 is distributed on CD. This CD contains on-line documentation for all codes included in the system, the codes configured to run on a variety of computers, and many example problems that you can use to familiarize yourself with the system. TART97 completely supersedes all older versions of TART, and it is strongly recommended that users only use the most recent version of TART97 and ist data files.« less

  8. Fully energy-dependent HZETRN (a galactic cosmic-ray transport code)

    NASA Technical Reports Server (NTRS)

    Shinn, Judy L.; John, Sarah; Tripathi, Ram K.; Norbury, John W.; Wilson, John W.; Townsend, Lawrence W.

    1992-01-01

    For extended manned space missions, the radiation shielding design requires efficient and accurate cosmic-ray transport codes that can handle the physics processes in detail. The Langley Research Center galactic cosmic-ray transport code (HZETRN) is currently under development for such design use. The cross sections for the production of secondary nucleons in the existing HZETRN code are energy dependent only for nucleon collisions. The approximation of energy-independent, heavy-ion fragmentation cross section is now removed by implementing a mathematically simplified energy-dependent stepping formalism for heavy ions. The cross section at each computational grid is obtained by linear interpolation from a few tabulated data to minimize computing time. Test runs were made for galactic cosmic-ray transport through a liquid hydrogen shield and a water shield at solar minimum. The results show no appreciable change in total fluxes or computing time compared with energy-independent calculations. Differences in high LET (linear energy transfer) spectra are noted, however, because of the large variation in cross sections at the low-energy region. The high LET components are significantly higher in the new code and have important implications on biological risk estimates for heavy-ion exposure.

  9. GRAVE: An Interactive Geometry Construction and Visualization Software System for the TORT Nuclear Radiation Transport Code

    SciTech Connect

    Blakeman, E.D.

    2000-05-07

    A software system, GRAVE (Geometry Rendering and Visual Editor), has been developed at the Oak Ridge National Laboratory (ORNL) to perform interactive visualization and development of models used as input to the TORT three-dimensional discrete ordinates radiation transport code. Three-dimensional and two-dimensional visualization displays are included. Display capabilities include image rotation, zoom, translation, wire-frame and translucent display, geometry cuts and slices, and display of individual component bodies and material zones. The geometry can be interactively edited and saved in TORT input file format. This system is an advancement over the current, non-interactive, two-dimensional display software. GRAVE is programmed in the Java programming language and can be implemented on a variety of computer platforms. Three- dimensional visualization is enabled through the Visualization Toolkit (VTK), a free-ware C++ software library developed for geometric and data visual display. Future plans include an extension of the system to read inputs using binary zone maps and combinatorial geometry models containing curved surfaces, such as those used for Monte Carlo code inputs. Also GRAVE will be extended to geometry visualization/editing for the DORT two-dimensional transport code and will be integrated into a single GUI-based system for all of the ORNL discrete ordinates transport codes.

  10. MCNP: a general Monte Carlo code for neutron and photon transport

    SciTech Connect

    Forster, R.A.; Godfrey, T.N.K.

    1985-01-01

    MCNP is a very general Monte Carlo neutron photon transport code system with approximately 250 person years of Group X-6 code development invested. It is extremely portable, user-oriented, and a true production code as it is used about 60 Cray hours per month by about 150 Los Alamos users. It has as its data base the best cross-section evaluations available. MCNP contains state-of-the-art traditional and adaptive Monte Carlo techniques to be applied to the solution of an ever-increasing number of problems. Excellent user-oriented documentation is available for all facets of the MCNP code system. Many useful and important variants of MCNP exist for special applications. The Radiation Shielding Information Center (RSIC) in Oak Ridge, Tennessee is the contact point for worldwide MCNP code and documentation distribution. A much improved MCNP Version 3A will be available in the fall of 1985, along with new and improved documentation. Future directions in MCNP development will change the meaning of MCNP to Monte Carlo N Particle where N particle varieties will be transported.

  11. MULTIDIMENSIONAL COUPLED PHOTON-ELECTRON TRANSPORT SIMULATIONS USING NEUTRAL PARTICLE SN CODES

    SciTech Connect

    Ilas, Dan; Williams, Mark L; Peplow, Douglas E.; Kirk, Bernadette Lugue

    2008-01-01

    During the past two years a study was underway at ORNL to assess the suitability of the popular SN neutral particle codes ANISN, DORT and TORT for coupled photon-electron calculations specific to external beam therapy of medical physics applications. The CEPXS-BFP code was used to generate the cross sections. The computational tests were performed on phantoms typical of those used in medical physics for external beam therapy, with materials simulated by water at different densities and the comparisons were made against Monte Carlo simulations that served as benchmarks. Although the results for one-dimensional calculations were encouraging, it appeared that the higher dimensional transport codes had fundamental difficulties in handling the electron transport. The results of two-dimensional simulations using the code DORT with an S16 fully symmetric quadrature set agree fairly with the reference Monte Carlo results but not well enough for clinical applications. While the photon fluxes are in better agreement (generally, within less than 5% from the reference), the discrepancy increases, sometimes very significantly, for the electron fluxes. The paper, however, focuses on the results obtained with the three-dimensional code TORT which had convergence difficulties for the electron groups. Numerical instabilities occurred in these groups. These instabilities were more pronounced with the degree of anisotropy of the problem.

  12. PFLOTRAN: Reactive Flow & Transport Code for Use on Laptops to Leadership-Class Supercomputers

    SciTech Connect

    Hammond, Glenn E.; Lichtner, Peter C.; Lu, Chuan; Mills, Richard T.

    2012-04-18

    PFLOTRAN, a next-generation reactive flow and transport code for modeling subsurface processes, has been designed from the ground up to run efficiently on machines ranging from leadership-class supercomputers to laptops. Based on an object-oriented design, the code is easily extensible to incorporate additional processes. It can interface seamlessly with Fortran 9X, C and C++ codes. Domain decomposition parallelism is employed, with the PETSc parallel framework used to manage parallel solvers, data structures and communication. Features of the code include a modular input file, implementation of high-performance I/O using parallel HDF5, ability to perform multiple realization simulations with multiple processors per realization in a seamless manner, and multiple modes for multiphase flow and multicomponent geochemical transport. Chemical reactions currently implemented in the code include homogeneous aqueous complexing reactions and heterogeneous mineral precipitation/dissolution, ion exchange, surface complexation and a multirate kinetic sorption model. PFLOTRAN has demonstrated petascale performance using 2{sup 17} processor cores with over 2 billion degrees of freedom. Accomplishments achieved to date include applications to the Hanford 300 Area and modeling CO{sub 2} sequestration in deep geologic formations.

  13. Use of FEC coding to improve statistical multiplexing performance for video transport over ATM networks

    NASA Astrophysics Data System (ADS)

    Kurceren, Ragip; Modestino, James W.

    1998-12-01

    The use of forward error-control (FEC) coding, possibly in conjunction with ARQ techniques, has emerged as a promising approach for video transport over ATM networks for cell-loss recovery and/or bit error correction, such as might be required for wireless links. Although FEC provides cell-loss recovery capabilities it also introduces transmission overhead which can possibly cause additional cell losses. A methodology is described to maximize the number of video sources multiplexed at a given quality of service (QoS), measured in terms of decoded cell loss probability, using interlaced FEC codes. The transport channel is modelled as a block interference channel (BIC) and the multiplexer as single server, deterministic service, finite buffer supporting N users. Based upon an information-theoretic characterization of the BIC and large deviation bounds on the buffer overflow probability, the described methodology provides theoretically achievable upper limits on the number of sources multiplexed. Performance of specific coding techniques using interlaced nonbinary Reed-Solomon (RS) codes and binary rate-compatible punctured convolutional (RCPC) codes is illustrated.

  14. Modeling of tungsten transport in the linear plasma device PSI-2 with the 3D Monte-Carlo code ERO

    NASA Astrophysics Data System (ADS)

    Marenkov, E.; Eksaeva, A.; Borodin, D.; Kirschner, A.; Laengner, M.; Kurnaev, V.; Kreter, A.; Coenen, J. W.; Rasinski, M.

    2015-08-01

    The ERO code was modified for modeling of plasma-surface interactions and impurities transport in the PSI-2 installation. Results of experiments on tungsten target irradiation with argon plasma were taken as a benchmark for the new version of the code. Spectroscopy data modeled with the code are in good agreement with experimental ones. Main factors contributing to observed discrepancies are discussed.

  15. Regional Atmospheric Transport Code for Hanford Emission Tracking (RATCHET). Hanford Environmental Dose Reconstruction Project

    SciTech Connect

    Ramsdell, J.V. Jr.; Simonen, C.A.; Burk, K.W.

    1994-02-01

    The purpose of the Hanford Environmental Dose Reconstruction (HEDR) Project is to estimate radiation doses that individuals may have received from operations at the Hanford Site since 1944. This report deals specifically with the atmospheric transport model, Regional Atmospheric Transport Code for Hanford Emission Tracking (RATCHET). RATCHET is a major rework of the MESOILT2 model used in the first phase of the HEDR Project; only the bookkeeping framework escaped major changes. Changes to the code include (1) significant changes in the representation of atmospheric processes and (2) incorporation of Monte Carlo methods for representing uncertainty in input data, model parameters, and coefficients. To a large extent, the revisions to the model are based on recommendations of a peer working group that met in March 1991. Technical bases for other portions of the atmospheric transport model are addressed in two other documents. This report has three major sections: a description of the model, a user`s guide, and a programmer`s guide. These sections discuss RATCHET from three different perspectives. The first provides a technical description of the code with emphasis on details such as the representation of the model domain, the data required by the model, and the equations used to make the model calculations. The technical description is followed by a user`s guide to the model with emphasis on running the code. The user`s guide contains information about the model input and output. The third section is a programmer`s guide to the code. It discusses the hardware and software required to run the code. The programmer`s guide also discusses program structure and each of the program elements.

  16. Integrated TIGER Series of Coupled Electron/Photon Monte Carlo Transport Codes System.

    2012-11-30

    Version: 00 Distribution is restricted to US Government Agencies and Their Contractors Only. The Integrated Tiger Series (ITS) is a powerful and user-friendly software package permitting state-of-the-art Monte Carlo solution of linear time-independent coupled electron/photon radiation transport problems, with or without the presence of macroscopic electric and magnetic fields of arbitrary spatial dependence. The goal has been to simultaneously maximize operational simplicity and physical accuracy. Through a set of preprocessor directives, the user selects onemore » of the many ITS codes. The ease with which the makefile system is applied combines with an input scheme based on order-independent descriptive keywords that makes maximum use of defaults and internal error checking to provide experimentalists and theorists alike with a method for the routine but rigorous solution of sophisticated radiation transport problems. Physical rigor is provided by employing accurate cross sections, sampling distributions, and physical models for describing the production and transport of the electron/photon cascade from 1.0 GeV down to 1.0 keV. The availability of source code permits the more sophisticated user to tailor the codes to specific applications and to extend the capabilities of the codes to more complex applications. Version 6, the latest version of ITS, contains (1) improvements to the ITS 5.0 codes, and (2) conversion to Fortran 95. The general user friendliness of the software has been enhanced through memory allocation to reduce the need for users to modify and recompile the code.« less

  17. Integrated TIGER Series of Coupled Electron/Photon Monte Carlo Transport Codes System.

    SciTech Connect

    VALDEZ, GREG D.

    2012-11-30

    Version: 00 Distribution is restricted to US Government Agencies and Their Contractors Only. The Integrated Tiger Series (ITS) is a powerful and user-friendly software package permitting state-of-the-art Monte Carlo solution of linear time-independent coupled electron/photon radiation transport problems, with or without the presence of macroscopic electric and magnetic fields of arbitrary spatial dependence. The goal has been to simultaneously maximize operational simplicity and physical accuracy. Through a set of preprocessor directives, the user selects one of the many ITS codes. The ease with which the makefile system is applied combines with an input scheme based on order-independent descriptive keywords that makes maximum use of defaults and internal error checking to provide experimentalists and theorists alike with a method for the routine but rigorous solution of sophisticated radiation transport problems. Physical rigor is provided by employing accurate cross sections, sampling distributions, and physical models for describing the production and transport of the electron/photon cascade from 1.0 GeV down to 1.0 keV. The availability of source code permits the more sophisticated user to tailor the codes to specific applications and to extend the capabilities of the codes to more complex applications. Version 6, the latest version of ITS, contains (1) improvements to the ITS 5.0 codes, and (2) conversion to Fortran 95. The general user friendliness of the software has been enhanced through memory allocation to reduce the need for users to modify and recompile the code.

  18. Modification of the finite element heat and mass transfer code (FEHM) to model multicomponent reactive transport

    SciTech Connect

    Viswanathan, H.S.

    1996-08-01

    The finite element code FEHMN, developed by scientists at Los Alamos National Laboratory (LANL), is a three-dimensional finite element heat and mass transport simulator that can handle complex stratigraphy and nonlinear processes such as vadose zone flow, heat flow and solute transport. Scientists at LANL have been developing hydrologic flow and transport models of the Yucca Mountain site using FEHMN. Previous FEHMN simulations have used an equivalent Kd model to model solute transport. In this thesis, FEHMN is modified making it possible to simulate the transport of a species with a rigorous chemical model. Including the rigorous chemical equations into FEHMN simulations should provide for more representative transport models for highly reactive chemical species. A fully kinetic formulation is chosen for the FEHMN reactive transport model. Several methods are available to computationally implement a fully kinetic formulation. Different numerical algorithms are investigated in order to optimize computational efficiency and memory requirements of the reactive transport model. The best algorithm of those investigated is then incorporated into FEHMN. The algorithm chosen requires for the user to place strongly coupled species into groups which are then solved for simultaneously using FEHMN. The complete reactive transport model is verified over a wide variety of problems and is shown to be working properly. The new chemical capabilities of FEHMN are illustrated by using Los Alamos National Laboratory`s site scale model of Yucca Mountain to model two-dimensional, vadose zone {sup 14}C transport. The simulations demonstrate that gas flow and carbonate chemistry can significantly affect {sup 14}C transport at Yucca Mountain. The simulations also prove that the new capabilities of FEHMN can be used to refine and buttress already existing Yucca Mountain radionuclide transport studies.

  19. Mesh2d

    SciTech Connect

    Greg Flach, Frank Smith

    2011-12-31

    Mesh2d is a Fortran90 program designed to generate two-dimensional structured grids of the form [x(i),y(i,j)] where [x,y] are grid coordinates identified by indices (i,j). The x(i) coordinates alone can be used to specify a one-dimensional grid. Because the x-coordinates vary only with the i index, a two-dimensional grid is composed in part of straight vertical lines. However, the nominally horizontal y(i,j0) coordinates along index i are permitted to undulate or otherwise vary. Mesh2d also assigns an integer material type to each grid cell, mtyp(i,j), in a user-specified manner. The complete grid is specified through three separate input files defining the x(i), y(i,j), and mtyp(i,j) variations.

  20. Mesh2d

    2011-12-31

    Mesh2d is a Fortran90 program designed to generate two-dimensional structured grids of the form [x(i),y(i,j)] where [x,y] are grid coordinates identified by indices (i,j). The x(i) coordinates alone can be used to specify a one-dimensional grid. Because the x-coordinates vary only with the i index, a two-dimensional grid is composed in part of straight vertical lines. However, the nominally horizontal y(i,j0) coordinates along index i are permitted to undulate or otherwise vary. Mesh2d also assignsmore » an integer material type to each grid cell, mtyp(i,j), in a user-specified manner. The complete grid is specified through three separate input files defining the x(i), y(i,j), and mtyp(i,j) variations.« less

  1. Vertical 2D Heterostructures

    NASA Astrophysics Data System (ADS)

    Lotsch, Bettina V.

    2015-07-01

    Graphene's legacy has become an integral part of today's condensed matter science and has equipped a whole generation of scientists with an armory of concepts and techniques that open up new perspectives for the postgraphene area. In particular, the judicious combination of 2D building blocks into vertical heterostructures has recently been identified as a promising route to rationally engineer complex multilayer systems and artificial solids with intriguing properties. The present review highlights recent developments in the rapidly emerging field of 2D nanoarchitectonics from a materials chemistry perspective, with a focus on the types of heterostructures available, their assembly strategies, and their emerging properties. This overview is intended to bridge the gap between two major—yet largely disjunct—developments in 2D heterostructures, which are firmly rooted in solid-state chemistry or physics. Although the underlying types of heterostructures differ with respect to their dimensions, layer alignment, and interfacial quality, there is common ground, and future synergies between the various assembly strategies are to be expected.

  2. Pedestal Fueling Simulations with a Coupled Kinetic-kinetic Plasma-neutral Transport Code

    SciTech Connect

    D.P. Stotler, C.S. Chang, S.H. Ku, J. Lang and G.Y. Park

    2012-08-29

    A Monte Carlo neutral transport routine, based on DEGAS2, has been coupled to the guiding center ion-electron-neutral neoclassical PIC code XGC0 to provide a realistic treatment of neutral atoms and molecules in the tokamak edge plasma. The DEGAS2 routine allows detailed atomic physics and plasma-material interaction processes to be incorporated into these simulations. The spatial pro le of the neutral particle source used in the DEGAS2 routine is determined from the uxes of XGC0 ions to the material surfaces. The kinetic-kinetic plasma-neutral transport capability is demonstrated with example pedestal fueling simulations.

  3. Energy Conservation Tests of a Coupled Kinetic-kinetic Plasma-neutral Transport Code

    SciTech Connect

    Stotler, D. P.; Chang, C. S.; Ku, S. H.; Lang, J.; Park, G.

    2012-08-29

    A Monte Carlo neutral transport routine, based on DEGAS2, has been coupled to the guiding center ion-electron-neutral neoclassical PIC code XGC0 to provide a realistic treatment of neutral atoms and molecules in the tokamak edge plasma. The DEGAS2 routine allows detailed atomic physics and plasma-material interaction processes to be incorporated into these simulations. The spatial pro le of the neutral particle source used in the DEGAS2 routine is determined from the uxes of XGC0 ions to the material surfaces. The kinetic-kinetic plasma-neutral transport capability is demonstrated with example pedestal fueling simulations.

  4. One-dimensional transport code modelling of the limiter-divertor region in tokamaks

    SciTech Connect

    Ogden, J.M.; Post, D.E.; Jensen, R.V.; Seidl, F.G.P.

    1980-02-01

    A model of the limiter-divertor scrape-off region has been incorporated into the BALDUR one-dimensional tokamak transport code. Simulations of PDX and ALCATOR have been carried out for ohmic and neutral beam heated cases. In particular, we have studied how the edge conditions and energy loss mechanisms of PDX depend upon plasma density, and compared our results with analytic estimates. The sensitivity of the results to changes in the transport coefficients and scrape-off model is also discussed.

  5. Application of the ASME code in designing containment vessels for packages used to transport radioactive materials

    SciTech Connect

    Raske, D.T.; Wang, Z.

    1992-07-01

    The primary concern governing the design of shipping packages containing radioactive materials is public safety during transport. When these shipments are within the regulatory jurisdiction of the US Department of Energy, the recommended design criterion for the primary containment vessel is either Section III or Section VIII, Division 1, of the ASME Boiler and Pressure Vessel Code, depending on the activity of the contents. The objective of this paper is to discuss the design of a prototypic containment vessel representative of a packaging for the transport of high-level radioactive material.

  6. Simulations of 4D edge transport and dynamics using the TEMPEST gyro-kinetic code

    NASA Astrophysics Data System (ADS)

    Rognlien, T. D.; Cohen, B. I.; Cohen, R. H.; Dorr, M. R.; Hittinger, J. A. F.; Kerbel, G. D.; Nevins, W. M.; Xiong, Z.; Xu, X. Q.

    2006-10-01

    Simulation results are presented for tokamak edge plasmas with a focus on the 4D (2r,2v) option of the TEMPEST continuum gyro-kinetic code. A detailed description of a variety of kinetic simulations is reported, including neoclassical radial transport from Coulomb collisions, electric field generation, dynamic response to perturbations by geodesic acoustic modes, and parallel transport on open magnetic-field lines. Comparison is made between the characteristics of the plasma solutions on closed and open magnetic-field line regions separated by a magnetic separatrix, and simple physical models are used to qualitatively explain the differences observed in mean flow and electric-field generation. The status of extending the simulations to 5D turbulence will be summarized. The code structure used in this ongoing project is also briefly described, together with future plans.

  7. Application of the new MultiTrans SP3 radiation transport code in BNCT dose planning.

    PubMed

    Kotiluoto, P; Hiisamäki, P; Savolainen, S

    2001-09-01

    Dose planning in boron neutron capture therapy (BNCT) is a complex problem and requires sophisticated numerical methods. In the framework of the Finnish BNCT project, new deterministic three-dimensional radiation transport code MultiTrans SP3 has been developed at VTT Chemical Technology, based on a novel application of the tree multigrid technique. To test the applicability of this new code in a realistic BNCT dose planning problem, cylindrical PMMA (polymethyl-methacrylate) phantom was chosen as a benchmark case. It is a convenient benchmark, as it has been modeled by several different codes, including well-known DORT and MCNP. Extensive measured data also exist. In this paper, a comparison of the new MultiTrans SP3 code with other methods is presented for the PMMA phantom case. Results show that the total neutron dose rate to ICRU adult brain calculated by the MultiTrans SP3 code differs less than 4% in 2 cm depth in phantom (in thermal maximum) from the DORT calculation. Results also show that the calculated 197Au(n,gamma) and 55Mn(n,gamma) reaction rates in 2 cm depth in phantom differ less than 4% and 1% from the measured values, respectively. However, the photon dose calculated by the MultiTrans SP3 code seems to be incorrect in this PMMA phantom case, which requires further studying. As expected, the deterministic MultiTrans SP3 code is over an order of magnitude faster than stochastic Monte Carlo codes (with similar resolution), thus providing a very efficient tool for BNCT dose planning. PMID:11585221

  8. BRYNTRN: A baryon transport computer code, computation procedures and data base

    NASA Technical Reports Server (NTRS)

    Wilson, John W.; Townsend, Lawrence W.; Chun, Sang Y.; Buck, Warren W.; Khan, Ferdous; Cucinotta, Frank

    1988-01-01

    The development is described of an interaction data base and a numerical solution to the transport of baryons through the arbitrary shield material based on a straight ahead approximation of the Boltzmann equation. The code is most accurate for continuous energy boundary values but gives reasonable results for discrete spectra at the boundary with even a relatively coarse energy grid (30 points) and large spatial increments (1 cm in H2O).

  9. The three-dimensional, discrete ordinates neutral particle transport code TORT: An overview

    SciTech Connect

    Azmy, Y.Y.

    1996-12-31

    The centerpiece of the Discrete Ordinates Oak Ridge System (DOORS), the three-dimensional neutral particle transport code TORT is reviewed. Its most prominent features pertaining to large applications, such as adjustable problem parameters, memory management, and coarse mesh methods, are described. Advanced, state-of-the-art capabilities including acceleration and multiprocessing are summarized here. Future enhancement of existing graphics and visualization tools is briefly presented.

  10. Applications of the 3-D Deterministic Transport Code Attlla for Core Safety Analysis

    SciTech Connect

    D. S. Lucas

    2004-10-01

    An LDRD (Laboratory Directed Research and Development) project is ongoing at the Idaho National Engineering and Environmental Laboratory (INEEL) for applying the three-dimensional multi-group deterministic neutron transport code (Attila®) to criticality, flux and depletion calculations of the Advanced Test Reactor (ATR). This paper discusses the model development, capabilities of Attila, generation of the cross-section libraries, and comparisons to an ATR MCNP model and future.

  11. Documentation and verification of VST2D; a model for simulating transient, Variably Saturated, coupled water-heat-solute Transport in heterogeneous, anisotropic 2-Dimensional, ground-water systems with variable fluid density

    USGS Publications Warehouse

    Friedel, Michael J.

    2001-01-01

    This report describes a model for simulating transient, Variably Saturated, coupled water-heatsolute Transport in heterogeneous, anisotropic, 2-Dimensional, ground-water systems with variable fluid density (VST2D). VST2D was developed to help understand the effects of natural and anthropogenic factors on quantity and quality of variably saturated ground-water systems. The model solves simultaneously for one or more dependent variables (pressure, temperature, and concentration) at nodes in a horizontal or vertical mesh using a quasi-linearized general minimum residual method. This approach enhances computational speed beyond the speed of a sequential approach. Heterogeneous and anisotropic conditions are implemented locally using individual element property descriptions. This implementation allows local principal directions to differ among elements and from the global solution domain coordinates. Boundary conditions can include time-varying pressure head (or moisture content), heat, and/or concentration; fluxes distributed along domain boundaries and/or at internal node points; and/or convective moisture, heat, and solute fluxes along the domain boundaries; and/or unit hydraulic gradient along domain boundaries. Other model features include temperature and concentration dependent density (liquid and vapor) and viscosity, sorption and/or decay of a solute, and capability to determine moisture content beyond residual to zero. These features are described in the documentation together with development of the governing equations, application of the finite-element formulation (using the Galerkin approach), solution procedure, mass and energy balance considerations, input requirements, and output options. The VST2D model was verified, and results included solutions for problems of water transport under isohaline and isothermal conditions, heat transport under isobaric and isohaline conditions, solute transport under isobaric and isothermal conditions, and coupled water

  12. Advances and future needs in particle production and transport code developments

    SciTech Connect

    Mokhov, N.V.; /Fermilab

    2009-12-01

    The next generation of accelerators and ever expanding needs of existing accelerators demand new developments and additions to Monte-Carlo codes, with an emphasis on enhanced modeling of elementary particle and heavy-ion interactions and transport. Challenges arise from extremely high beam energies and beam power, increasing complexity of accelerators and experimental setups, as well as design, engineering and performance constraints. All these put unprecedented requirements on the accuracy of particle production predictions, the capability and reliability of the codes used in planning new accelerator facilities and experiments, the design of machine, target and collimation systems, detectors and radiation shielding and minimization of their impact on environment. Recent advances in widely-used general-purpose all-particle codes are described for the most critical modules such as particle production event generators, elementary particle and heavy ion transport in an energy range which spans up to 17 decades, nuclide inventory and macroscopic impact on materials, and dealing with complex geometry of accelerator and detector structures. Future requirements for developing physics models and Monte-Carlo codes are discussed.

  13. Integral transport computation of gamma detector response with the CPM2 code

    SciTech Connect

    Jones, D.B. , Inc., Campbell, CA )

    1989-12-01

    CPM-2 Version 3 is an enhanced version of the CPM-2 lattice physics computer code which supports the capabilities to (1) perform a two-dimensional gamma flux calculation and (2) perform Restart/Data file maintenance operations. The Gamma Calculation Module implemented in CPM-2 was first developed for EPRI in the CASMO-1 computer code by Studsvik Energiteknik under EPRI Agreement RP2352-01. The gamma transport calculation uses the CPM-HET code module to calculate the transport of gamma rays in two dimensions in a mixed cylindrical-rectangular geometry, where the basic fuel assembly and component regions are maintained in a rectangular geometry, but the fuel pins are represented as cylinders within a square pin cell mesh. Such a capability is needed to represent gamma transport in an essentially transparent medium containing spatially distributed black'' cylindrical pins. Under a subcontract to RP2352-01, RPI developed the gamma production and gamma interaction library used for gamma calculation. The CPM-2 gamma calculation was verified against reference results generated by Studsvik using the CASMO-1 program. The CPM-2 Restart/Data file maintenance capabilities provide the user with options to copy files between Restart/Data tapes and to purge files from the Restart/Data tapes.

  14. The first transport code simulations using the trapped gyro-Landau-fluid model

    SciTech Connect

    Kinsey, J. E.; Staebler, G. M.; Waltz, R. E.

    2008-05-15

    The first transport code simulations using the newly developed trapped gyro-Landau-fluid (TGLF) theory-based transport model are presented. TGLF has comprehensive physics to approximate the turbulent transport due to drift-ballooning modes in tokamaks. The TGLF model is a next generation gyro-Landau-fluid model that improves the accuracy of the trapped particle response and the finite Larmor radius effects compared to its predecessor, GLF23. The model solves for the linear eigenmodes of trapped ion and electron modes, ion and electron temperature gradient modes, and electromagnetic kinetic ballooning modes in either shifted circle or shaped geometry. A database of over 400 nonlinear gyrokinetic simulations using the GYRO code has been created. A subset of 83 simulations with shaped geometry has been used to find a model for the saturation levels. Using a simple quasilinear (QL) saturation rule, remarkable agreement with the energy and particle fluxes from a wide variety of GYRO simulations is found for both shaped or circular geometry and also for low aspect ratio. Using this new QL saturation rule along with a new ExB shear quench rule for shaped geometry, the density and temperature profiles have been predicted in over 500 transport code runs and the results compared against experimental data from 96 tokamak discharges. Compared to GLF23, the TGLF model demonstrates better agreement between the predicted and experimental temperature profiles. Surprisingly, TGLF predicts that the high-k modes are found to play an important role in the central core region of low and high confinement plasmas lacking transport barriers.

  15. Assessing the Cr(VI) reduction efficiency of a permeable reactive barrier using Cr isotope measurements and 2D reactive transport modeling

    NASA Astrophysics Data System (ADS)

    Wanner, Christoph; Zink, Sonja; Eggenberger, Urs; Mäder, Urs

    2012-04-01

    In Thun, Switzerland, a permeable reactive barrier (PRB) for Cr(VI) reduction by gray cast iron was installed in May 2008. The PRB is composed of a double array of vertical piles containing iron shavings and gravel. The aquifer in Thun is almost saturated with dissolved oxygen and the groundwater flow velocities are ca. 10-15 m/day. Two years after PRB installation Cr(VI) concentrations still permanently exceed the Swiss threshold value for contaminated sites downstream of the barrier at selected localities. Groundwater δ53/52CrSRM979 measurements were used to track Cr(VI) reduction induced by the PRB. δ53/52CrSRM979 values of two samples downstream of the PRB showed a clear fractionation towards more positive values compared to four samples from the hotspot, which is clear evidence of Cr(VI) reduction induced by the PRB. Another downstream sample did not show a shift to more positive δ53/52CrSRM979 values. Because this latter location correlates with the highest downstream Cr(VI) concentration it is proposed that a part of the Cr(VI) plume is bypassing the barrier. Using a Rayleigh fractionation model a minimum present-day overall Cr(VI) reduction efficiency of ca. 15% was estimated. A series of 2D model simulations, including the fractionation of Cr isotopes, confirm that only a PRB bypass of parts of the Cr(VI) plume can lead to the observed values. Additionally, the simulations revealed that the proposed bypass occurs due to an insufficient permeability of the individual PRB piles. It is concluded that with this type of PRB a complete and long-lasting Cr(VI) reduction is extremely difficult to achieve for Cr(VI) contaminations located in nearly oxygen and calcium carbonate saturated aquifer in a regime of high groundwater velocities. Additional remediation action would limit the environmental impact and allow to reach target concentrations.

  16. Brittle damage models in DYNA2D

    SciTech Connect

    Faux, D.R.

    1997-09-01

    DYNA2D is an explicit Lagrangian finite element code used to model dynamic events where stress wave interactions influence the overall response of the system. DYNA2D is often used to model penetration problems involving ductile-to-ductile impacts; however, with the advent of the use of ceramics in the armor-anti-armor community and the need to model damage to laser optics components, good brittle damage models are now needed in DYNA2D. This report will detail the implementation of four brittle damage models in DYNA2D, three scalar damage models and one tensor damage model. These new brittle damage models are then used to predict experimental results from three distinctly different glass damage problems.

  17. TERRA: a computer code for simulating the transport of environmentally released radionuclides through agriculture

    SciTech Connect

    Baes, C.F. III; Sharp, R.D.; Sjoreen, A.L.; Hermann, O.W.

    1984-11-01

    TERRA is a computer code which calculates concentrations of radionuclides and ingrowing daughters in surface and root-zone soil, produce and feed, beef, and milk from a given deposition rate at any location in the conterminous United States. The code is fully integrated with seven other computer codes which together comprise a Computerized Radiological Risk Investigation System, CRRIS. Output from either the long range (> 100 km) atmospheric dispersion code RETADD-II or the short range (<80 km) atmospheric dispersion code ANEMOS, in the form of radionuclide air concentrations and ground deposition rates by downwind location, serves as input to TERRA. User-defined deposition rates and air concentrations may also be provided as input to TERRA through use of the PRIMUS computer code. The environmental concentrations of radionuclides predicted by TERRA serve as input to the ANDROS computer code which calculates population and individual intakes, exposures, doses, and risks. TERRA incorporates models to calculate uptake from soil and atmospheric deposition on four groups of produce for human consumption and four groups of livestock feeds. During the environmental transport simulation, intermediate calculations of interception fraction for leafy vegetables, produce directly exposed to atmospherically depositing material, pasture, hay, and silage are made based on location-specific estimates of standing crop biomass. Pasture productivity is estimated by a model which considers the number and types of cattle and sheep, pasture area, and annual production of other forages (hay and silage) at a given location. Calculations are made of the fraction of grain imported from outside the assessment area. TERRA output includes the above calculations and estimated radionuclide concentrations in plant produce, milk, and a beef composite by location.

  18. FPTRAN: A Volatile Fission Products and Structural Materials Transport Code for SCDAP/RELAP5

    SciTech Connect

    Honaiser, Eduardo; Anghaie, Samim

    2004-07-01

    The fission products behavior in reactor coolant systems (RCS) is divided in the fission products release from the fuel, transport through the piping system, and the chemistry of the several materials present in a LWR. The transport poses significant difficulty for the implementation, due to the complexity in the treatment of the system of equations generated for the solution, as well as the difficulties in the modeling of certain phenomena. This paper presents the FPTRAN code, which was incorporated to SCDAP/RELAP5, and initially tested satisfactorily. FPTRAN does the calculation of the transport of fission products in RCS, estimating the amount of material being deposited over the pipes, and the amount released to the containment, once a source of released material (fission products and structural materials) to the piping system is provided. (authors)

  19. Assessing the Cr(VI) reduction efficiency of a permeable reactive barrier using Cr isotope measurements and 2D reactive transport modeling.

    PubMed

    Wanner, Christoph; Zink, Sonja; Eggenberger, Urs; Mäder, Urs

    2012-04-01

    In Thun, Switzerland, a permeable reactive barrier (PRB) for Cr(VI) reduction by gray cast iron was installed in May 2008. The PRB is composed of a double array of vertical piles containing iron shavings and gravel. The aquifer in Thun is almost saturated with dissolved oxygen and the groundwater flow velocities are ca. 10-15m/day. Two years after PRB installation Cr(VI) concentrations still permanently exceed the Swiss threshold value for contaminated sites downstream of the barrier at selected localities. Groundwater δ(53/52)Cr(SRM979) measurements were used to track Cr(VI) reduction induced by the PRB. δ(53/52)Cr(SRM979) values of two samples downstream of the PRB showed a clear fractionation towards more positive values compared to four samples from the hotspot, which is clear evidence of Cr(VI) reduction induced by the PRB. Another downstream sample did not show a shift to more positive δ(53/52)Cr(SRM979) values. Because this latter location correlates with the highest downstream Cr(VI) concentration it is proposed that a part of the Cr(VI) plume is bypassing the barrier. Using a Rayleigh fractionation model a minimum present-day overall Cr(VI) reduction efficiency of ca. 15% was estimated. A series of 2D model simulations, including the fractionation of Cr isotopes, confirm that only a PRB bypass of parts of the Cr(VI) plume can lead to the observed values. Additionally, the simulations revealed that the proposed bypass occurs due to an insufficient permeability of the individual PRB piles. It is concluded that with this type of PRB a complete and long-lasting Cr(VI) reduction is extremely difficult to achieve for Cr(VI) contaminations located in nearly oxygen and calcium carbonate saturated aquifer in a regime of high groundwater velocities. Additional remediation action would limit the environmental impact and allow to reach target concentrations. PMID:22343010

  20. Multicomponent and multistep radioactive decay modeling module for groundwater flow and contaminant transport computer code

    NASA Astrophysics Data System (ADS)

    Kharkhordin, I. L.

    2013-12-01

    Correct calculations of multistep radioactive decay is important for radionuclide transport forecast at contaminated sites and designing radionuclide storage facilities as well as for a number applications of natural radioactive tracers for understanding of groundwater flow in complex hydrogeological systems. Radioactive chains can involves a number of branches with certain probabilities of decay and up to fourteen steps. General description of radioactive decay in complex system could be presented as a system of linear differential equations. Numerical solution of this system encounters a difficulties connected with wide rage of radioactive decay constants variations. In present work the database with 1253 records of radioactive isotope decay parameters for 97 elements was created. An algorithm of analytical solution construction and solving was elaborated for arbitrary radioactive isotope system taking into account the possible chain branching and connection. The algorithm is based on radionuclide decay graphs. The main steps of algorithm is as follows: a) searching of all possible isotopes in database, creation full isotope list; b) looking for main parent isotopes; c) construction of all possible radioactive chains; d) looking for branching and connections in decay chains, marking of links as primary (left chain in graph for main parent isotope), secondary (after connection), and recurring (before branching); e) construction and calculation the coefficients for analytical solutions. The developed computer code was tested on a few simple systems like follows: Cs-135 - one step decay, Sr-90 (Y-90) - two steps decay, U-238+U-235 mixture - complex decay with branching. Calculation of radiogenic He-4 is also possible witch could be important application for groundwater flow and transport model calibration using natural tracers. The computer code for multistep radioactive calculation was elaborated for incorporation into NIMFA code. NIMFA is a parallel computer code

  1. SESOIL. Code System Calculate One-Dimensional Vertical Transport Unsaturated Soil Zone

    SciTech Connect

    Scott, S.J.; Hetrick, D.M.

    1994-08-01

    SESOIL, as an integrated screening-level soil compartment model, is designed to simultaneously model water transport, sediment transport, and pollutant fate. SESOIL is a one-dimensional vertical transport model for the unsaturated soil zone. Only one compound at a time can be considered. The model is based on mass balance and equilibrium partitioning of the chemical between different phases (dissolved, sorbed, vapor, and pure). The SESOIL model was designed to perform long-term simulations of chemical transport and transformations in the soil and uses theoretically derived equations to represent water transport, sediment transport on the land surface, pollutant transformation, and migration of the pollutant to the atmosphere and groundwater. Climatic data, compartment geometry, and soil and chemical property data are the major components used in the equations. SESOIL was developed as a screening-level model, utilizing less soil, chemical, and meteorological values as input than most other similar models. Output of SESOIL includes time-varying pollutant concentrations at various soil depths and pollutant loss from the unsaturated zone in terms of surface runoff, percolation to the groundwater, volatilization, and degradation. The February 1995 release corrects an error that caused the code to fail when average monthly air temperature was -10C and includes an improved iteration procedure for the mass balance equations in the model.

  2. SESOIL. Code System Calculate One-Dimensional Vertical Transport Unsaturated Soil Zone

    SciTech Connect

    Hetrick, D.M.; Scott, D.J.

    1994-08-01

    SESOIL, as an integrated screening-level soil compartment model, is designed to simultaneously model water transport, sediment transport, and pollutant fate. SESOIL is a one-dimensional vertical transport model for the unsaturated soil zone. Only one compound at a time can be considered. The model is based on mass balance and equilibrium partitioning of the chemical between different phases (dissolved, sorbed, vapor, and pure). The SESOIL model was designed to perform long-term simulations of chemical transport and transformations in the soil and uses theoretically derived equations to represent water transport, sediment transport on the land surface, pollutant transformation, and migration of the pollutant to the atmosphere and groundwater. Climatic data, compartment geometry, and soil and chemical property data are the major components used in the equations. SESOIL was developed as a screening-level model, utilizing less soil, chemical, and meteorological values as input than most other similar models. Output of SESOIL includes time-varying pollutant concentrations at various soil depths and pollutant loss from the unsaturated zone in terms of surface runoff, percolation to the groundwater, volatilization, and degradation. The February 1995 release corrects an error that caused the code to fail when average monthly air temperature was -10C and includes an improved iteration procedure for the mass balance equations in the model. PLEASE NOTE: The RISKPRO information management software (see OTHER PROG/OPER SYS INFO) was used by the developers of the New SESOIL User`s Guide in their study and revisions of SESOIL. Using RISKPRO in conjunction with SESOIL is an option, and it may provide the easiest way to use SESOIL. The other option, use of SESOIL in stand-alone mode, has been tested and used. The stand-alone option is covered in `Instructions for Running Stand-Alone SESOIL Code`, and in `A Seasonal Soil Compartment Model`.

  3. Code System Calculate One-Dimensional Vertical Transport Unsaturated Soil Zone

    SciTech Connect

    Bonazountas, Marcos; Wagner, Janet

    1989-03-01

    SESOIL, as an integrated screening-level soil compartment model, is designed to simultaneously model water transport, sediment transport, and pollutant fate. SESOIL is a one-dimensional vertical transport model for the unsaturated soil zone. Only one compound at a time can be considered. The model is based on mass balance and equilibrium partitioning of the chemical between different phases (dissolved, sorbed, vapor, and pure). The SESOIL model was designed to perform long-term simulations of chemical transport and transformations in the soil and uses theoretically derived equations to represent water transport, sediment transport on the land surface, pollutant transformation, and migration of the pollutant to the atmosphere and groundwater. Climatic data, compartment geometry, and soil and chemical property data are the major components used in the equations. SESOIL was developed as a screening-level model, utilizing less soil, chemical, and meteorological values as input than most other similar models. Output of SESOIL includes time-varying pollutant concentrations at various soil depths and pollutant loss from the unsaturated zone in terms of surface runoff, percolation to the groundwater, volatilization, and degradation. The February 1995 release corrects an error that caused the code to fail when average monthly air temperature was -10C and includes an improved iteration procedure for the mass balance equations in the model. PLEASE NOTE: The RISKPRO information management software (see OTHER PROG/OPER SYS INFO) was used by the developers of the New SESOIL User''s Guide in their study and revisions of SESOIL. Using RISKPRO in conjunction with SESOIL is an option, and it may provide the easiest way to use SESOIL. The other option, use of SESOIL in stand-alone mode, has been tested and used. The stand-alone option is covered in ''Instructions for Running Stand-Alone SESOIL Code'', and in ''A Seasonal Soil Compartment Model''.

  4. Code System Calculate One-Dimensional Vertical Transport Unsaturated Soil Zone

    1989-03-01

    SESOIL, as an integrated screening-level soil compartment model, is designed to simultaneously model water transport, sediment transport, and pollutant fate. SESOIL is a one-dimensional vertical transport model for the unsaturated soil zone. Only one compound at a time can be considered. The model is based on mass balance and equilibrium partitioning of the chemical between different phases (dissolved, sorbed, vapor, and pure). The SESOIL model was designed to perform long-term simulations of chemical transport andmore » transformations in the soil and uses theoretically derived equations to represent water transport, sediment transport on the land surface, pollutant transformation, and migration of the pollutant to the atmosphere and groundwater. Climatic data, compartment geometry, and soil and chemical property data are the major components used in the equations. SESOIL was developed as a screening-level model, utilizing less soil, chemical, and meteorological values as input than most other similar models. Output of SESOIL includes time-varying pollutant concentrations at various soil depths and pollutant loss from the unsaturated zone in terms of surface runoff, percolation to the groundwater, volatilization, and degradation. The February 1995 release corrects an error that caused the code to fail when average monthly air temperature was -10C and includes an improved iteration procedure for the mass balance equations in the model. PLEASE NOTE: The RISKPRO information management software (see OTHER PROG/OPER SYS INFO) was used by the developers of the New SESOIL User''s Guide in their study and revisions of SESOIL. Using RISKPRO in conjunction with SESOIL is an option, and it may provide the easiest way to use SESOIL. The other option, use of SESOIL in stand-alone mode, has been tested and used. The stand-alone option is covered in ''Instructions for Running Stand-Alone SESOIL Code'', and in ''A Seasonal Soil Compartment Model''.« less

  5. Modelling photon transport in non-uniform media for SPECT with a vectorized Monte Carlo code.

    PubMed

    Smith, M F

    1993-10-01

    A vectorized Monte Carlo code has been developed for modelling photon transport in non-uniform media for single-photon-emission computed tomography (SPECT). The code is designed to compute photon detection kernels, which are used to build system matrices for simulating SPECT projection data acquisition and for use in matrix-based image reconstruction. Non-uniform attenuating and scattering regions are constructed from simple three-dimensional geometric shapes, in which the density and mass attenuation coefficients are individually specified. On a Stellar GS1000 computer, Monte Carlo simulations are performed between 1.6 and 2.0 times faster when the vector processor is utilized than when computations are performed in scalar mode. Projection data acquired with a clinical SPECT gamma camera for a line source in a non-uniform thorax phantom are well modelled by Monte Carlo simulations. The vectorized Monte Carlo code was used to stimulate a 99Tcm SPECT myocardial perfusion study, and compensations for non-uniform attenuation and the detection of scattered photons improve activity estimation. The speed increase due to vectorization makes Monte Carlo simulation more attractive as a tool for modelling photon transport in non-uniform media for SPECT. PMID:8248288

  6. Benchmarking Heavy Ion Transport Codes FLUKA, HETC-HEDS MARS15, MCNPX, and PHITS

    SciTech Connect

    Ronningen, Reginald Martin; Remec, Igor; Heilbronn, Lawrence H.

    2013-06-07

    Powerful accelerators such as spallation neutron sources, muon-collider/neutrino facilities, and rare isotope beam facilities must be designed with the consideration that they handle the beam power reliably and safely, and they must be optimized to yield maximum performance relative to their design requirements. The simulation codes used for design purposes must produce reliable results. If not, component and facility designs can become costly, have limited lifetime and usefulness, and could even be unsafe. The objective of this proposal is to assess the performance of the currently available codes PHITS, FLUKA, MARS15, MCNPX, and HETC-HEDS that could be used for design simulations involving heavy ion transport. We plan to access their performance by performing simulations and comparing results against experimental data of benchmark quality. Quantitative knowledge of the biases and the uncertainties of the simulations is essential as this potentially impacts the safe, reliable and cost effective design of any future radioactive ion beam facility. Further benchmarking of heavy-ion transport codes was one of the actions recommended in the Report of the 2003 RIA R&D Workshop".

  7. NUBOW-2D Inelastic

    2002-01-31

    This program solves the two-dimensional mechanical equilbrium configuration of a core restraint system, which is subjected to radial temperature and flux gradients, on a time increment basis. At each time increment, the code calculates the irradiation creep and swelling strains for each duct from user-specified creep and swelling correlations. Using the calculated thermal bowing, inelastic bowing and the duct dilation, the corresponding equilibrium forces, beam deflections, total beam displacements, and structural reactivity changes are calculated.

  8. PRESTO-II: a low-level waste environmental transport and risk assessment code

    SciTech Connect

    Fields, D.E.; Emerson, C.J.; Chester, R.O.; Little, C.A.; Hiromoto, G.

    1986-04-01

    PRESTO-II (Prediction of Radiation Effects from Shallow Trench Operations) is a computer code designed for the evaluation of possible health effects from shallow-land and, waste-disposal trenches. The model is intended to serve as a non-site-specific screening model for assessing radionuclide transport, ensuing exposure, and health impacts to a static local population for a 1000-year period following the end of disposal operations. Human exposure scenarios considered include normal releases (including leaching and operational spillage), human intrusion, and limited site farming or reclamation. Pathways and processes of transit from the trench to an individual or population include ground-water transport, overland flow, erosion, surface water dilution, suspension, atmospheric transport, deposition, inhalation, external exposure, and ingestion of contaminated beef, milk, crops, and water. Both population doses and individual doses, as well as doses to the intruder and farmer, may be calculated. Cumulative health effects in terms of cancer deaths are calculated for the population over the 1000-year period using a life-table approach. Data are included for three example sites: Barnwell, South Carolina; Beatty, Nevada; and West Valley, New York. A code listing and example input for each of the three sites are included in the appendices to this report.

  9. A Computer Code System for the Calculation of Reactivity and Kinetic Parameters by One-Dimensional Neutron Transport Perturbation Theory.

    1985-02-01

    Version 00 TP1 is a transport theory code, developed to determine reactivity effects and kinetic parameters such as effective delayed neutron fractions and mean generation time by applying the usual perturbation formalism for one-dimensional geometry.

  10. 3D particle simulation of beams using the WARP code: Transport around bends

    SciTech Connect

    Friedman, A.; Grote, D.P.; Callahan, D.A.; Langdon, A.B. ); Haber, I. )

    1990-11-30

    WARP is a discrete-particle simulation program which was developed for studies of space charge dominated ion beams. It combines features of an accelerator code and a particle-in-cell plasma simulation. The code architecture, and techniques employed to enhance efficiency, are briefly described. Current applications are reviewed. In this paper we emphasize the physics of transport of three-dimensional beams around bends. We present a simple bent-beam PIC algorithm. Using this model, we have followed a long, thin beam around a bend in a simple racetrack system (assuming straight-pipe self-fields). Results on beam dynamics are presented; no transverse emittance growth (at mid-pulse) is observed. 11 refs., 5 figs.

  11. Domain Decomposition of a Constructive Solid Geometry Monte Carlo Transport Code

    SciTech Connect

    O'Brien, M J; Joy, K I; Procassini, R J; Greenman, G M

    2008-12-07

    Domain decomposition has been implemented in a Constructive Solid Geometry (CSG) Monte Carlo neutron transport code. Previous methods to parallelize a CSG code relied entirely on particle parallelism; but in our approach we distribute the geometry as well as the particles across processors. This enables calculations whose geometric description is larger than what could fit in memory of a single processor, thus it must be distributed across processors. In addition to enabling very large calculations, we show that domain decomposition can speed up calculations compared to particle parallelism alone. We also show results of a calculation of the proposed Laser Inertial-Confinement Fusion-Fission Energy (LIFE) facility, which has 5.6 million CSG parts.

  12. FZ2MC: A Tool for Monte Carlo Transport Code Geometry Manipulation

    SciTech Connect

    Hackel, B M; Nielsen Jr., D E; Procassini, R J

    2009-02-25

    The process of creating and validating combinatorial geometry representations of complex systems for use in Monte Carlo transport simulations can be both time consuming and error prone. To simplify this process, a tool has been developed which employs extensions of the Form-Z commercial solid modeling tool. The resultant FZ2MC (Form-Z to Monte Carlo) tool permits users to create, modify and validate Monte Carlo geometry and material composition input data. Plugin modules that export this data to an input file, as well as parse data from existing input files, have been developed for several Monte Carlo codes. The FZ2MC tool is envisioned as a 'universal' tool for the manipulation of Monte Carlo geometry and material data. To this end, collaboration on the development of plug-in modules for additional Monte Carlo codes is desired.

  13. Application of three-dimensional transport code to the analysis of the neutron streaming experiment

    SciTech Connect

    Chatani, K.; Slater, C.O.

    1990-01-01

    This paper summarized the calculational results of neutron streaming through a Clinch River Breeder Reactor (CRBR) Prototype coolant pipe chaseway. Particular emphasis is placed on results at bends in the chaseway. Calculations were performed with three three-dimensional codes: the discrete ordinates radiation transport code TORT and Monte Carlo radiation transport code MORSE, which were developed by Oak Ridge National Laboratory (ORNL), and the discrete ordinates code ENSEMBLE, which was developed in Japan. The purpose of the calculations is not only to compare the calculational results with the experimental results, but also to compare the results of TORT and MORSE with those of ENSEMBLE. In the TORT calculations, two types of difference methods, weighted-difference method was applied in ENSEMBLE calculation. Both TORT and ENSEMBLE produced nearly the same calculational results, but differed in the number of iterations required for converging each neutron group. Also, the two types of difference methods in the TORT calculations showed no appreciable variance in the number of iterations required. However, a noticeable disparity in the computer times and some variation in the calculational results did occur. The comparisons of the calculational results with the experimental results, showed for the epithermal neutron flux generally good agreement in the first and second legs and at the first bend where the two-dimensional modeling might be difficult. Results were fair to poor along the centerline of the first leg near the opening to the second leg because of discrete ordinates ray effects. Additionally, the agreement was good throughout the first and second legs for the thermal neutron region. Calculations with MORSE were made. These calculational results and comparisons are described also. 8 refs., 4 figs.

  14. ITS version 5.0 : the integrated TIGER series of coupled electron/photon Monte Carlo transport codes.

    SciTech Connect

    Franke, Brian Claude; Kensek, Ronald Patrick; Laub, Thomas William

    2004-06-01

    ITS is a powerful and user-friendly software package permitting state of the art Monte Carlo solution of linear time-independent couple electron/photon radiation transport problems, with or without the presence of macroscopic electric and magnetic fields of arbitrary spatial dependence. Our goal has been to simultaneously maximize operational simplicity and physical accuracy. Through a set of preprocessor directives, the user selects one of the many ITS codes. The ease with which the makefile system is applied combines with an input scheme based on order-independent descriptive keywords that makes maximum use of defaults and internal error checking to provide experimentalists and theorists alike with a method for the routine but rigorous solution of sophisticated radiation transport problems. Physical rigor is provided by employing accurate cross sections, sampling distributions, and physical models for describing the production and transport of the electron/photon cascade from 1.0 GeV down to 1.0 keV. The availability of source code permits the more sophisticated user to tailor the codes to specific applications and to extend the capabilities of the codes to more complex applications. Version 5.0, the latest version of ITS, contains (1) improvements to the ITS 3.0 continuous-energy codes, (2)multigroup codes with adjoint transport capabilities, and (3) parallel implementations of all ITS codes. Moreover the general user friendliness of the software has been enhanced through increased internal error checking and improved code portability.

  15. Improved Convergence Rate of Multi-Group Scattering Moment Tallies for Monte Carlo Neutron Transport Codes

    NASA Astrophysics Data System (ADS)

    Nelson, Adam

    Multi-group scattering moment matrices are critical to the solution of the multi-group form of the neutron transport equation, as they are responsible for describing the change in direction and energy of neutrons. These matrices, however, are difficult to correctly calculate from the measured nuclear data with both deterministic and stochastic methods. Calculating these parameters when using deterministic methods requires a set of assumptions which do not hold true in all conditions. These quantities can be calculated accurately with stochastic methods, however doing so is computationally expensive due to the poor efficiency of tallying scattering moment matrices. This work presents an improved method of obtaining multi-group scattering moment matrices from a Monte Carlo neutron transport code. This improved method of tallying the scattering moment matrices is based on recognizing that all of the outgoing particle information is known a priori and can be taken advantage of to increase the tallying efficiency (therefore reducing the uncertainty) of the stochastically integrated tallies. In this scheme, the complete outgoing probability distribution is tallied, supplying every one of the scattering moment matrices elements with its share of data. In addition to reducing the uncertainty, this method allows for the use of a track-length estimation process potentially offering even further improvement to the tallying efficiency. Unfortunately, to produce the needed distributions, the probability functions themselves must undergo an integration over the outgoing energy and scattering angle dimensions. This integration is too costly to perform during the Monte Carlo simulation itself and therefore must be performed in advance by way of a pre-processing code. The new method increases the information obtained from tally events and therefore has a significantly higher efficiency than the currently used techniques. The improved method has been implemented in a code system

  16. Polarization correction for ionization loss in a galactic cosmic ray transport code (HZETRN)

    NASA Technical Reports Server (NTRS)

    Shinn, Judy L.; Farhat, Hamidullah; Badavi, Francis F.; Wilson, John W.

    1993-01-01

    An approximate polarization correction for ionization loss suggested by Sternheimer has been implemented in the galactic cosmic ray transport code (HZETRN) developed at the Langley Research Center. Sample calculations made for the aluminum shield and liquid hydrogen shield show no more than a plus or minus 2 percent change in the linear energy transfer (LET) distribution for flux compared with those without polarization correction. This very small change is expected because the effect of polarization correction on the reduction in stopping power of ions with energies above 2 GeV/amu is suppressed by the decrease in galactic cosmic ray ion flux at such high energies.

  17. New Capabilities in Mercury: A Modern, Monte Carlo Particle Transport Code

    SciTech Connect

    Procassini, R J; Cullen, D E; Greenman, G M; Hagmann, C A; Kramer, K J; McKinley, M S; O'Brien, M J; Taylor, J M

    2007-03-08

    The new physics, algorithmic and computer science capabilities of the Mercury general-purpose Monte Carlo particle transport code are discussed. The new physics and algorithmic features include in-line energy deposition and isotopic depletion, significant enhancements to the tally and source capabilities, diagnostic ray-traced particles, support for multi-region hybrid (mesh and combinatorial geometry) systems, and a probability of initiation method. Computer science enhancements include a second method of dynamically load-balancing parallel calculations, improved methods for visualizing 3-D combinatorial geometries and initial implementation of an in-line visualization capabilities.

  18. Operator-splitting errors in coupled reactive transport codes for flow and transport under atmospheric boundary conditions or layered soil profiles

    Technology Transfer Automated Retrieval System (TEKTRAN)

    One possible way of integrating subsurface flow and transport processes with (bio)geochemical reactions is to couple by means of an operator-splitting approach two completely separate codes, one for variably-saturated flow and solute transport and one for equilibrium and kinetic biogeochemical react...

  19. Implementation, capabilities, and benchmarking of Shift, a massively parallel Monte Carlo radiation transport code

    DOE PAGESBeta

    Pandya, Tara M.; Johnson, Seth R.; Evans, Thomas M.; Davidson, Gregory G.; Hamilton, Steven P.; Godfrey, Andrew T.

    2015-12-21

    This paper discusses the implementation, capabilities, and validation of Shift, a massively parallel Monte Carlo radiation transport package developed and maintained at Oak Ridge National Laboratory. It has been developed to scale well from laptop to small computing clusters to advanced supercomputers. Special features of Shift include hybrid capabilities for variance reduction such as CADIS and FW-CADIS, and advanced parallel decomposition and tally methods optimized for scalability on supercomputing architectures. Shift has been validated and verified against various reactor physics benchmarks and compares well to other state-of-the-art Monte Carlo radiation transport codes such as MCNP5, CE KENO-VI, and OpenMC. Somemore » specific benchmarks used for verification and validation include the CASL VERA criticality test suite and several Westinghouse AP1000® problems. These benchmark and scaling studies show promising results.« less

  20. Implementation, capabilities, and benchmarking of Shift, a massively parallel Monte Carlo radiation transport code

    SciTech Connect

    Pandya, Tara M.; Johnson, Seth R.; Evans, Thomas M.; Davidson, Gregory G.; Hamilton, Steven P.; Godfrey, Andrew T.

    2015-12-21

    This paper discusses the implementation, capabilities, and validation of Shift, a massively parallel Monte Carlo radiation transport package developed and maintained at Oak Ridge National Laboratory. It has been developed to scale well from laptop to small computing clusters to advanced supercomputers. Special features of Shift include hybrid capabilities for variance reduction such as CADIS and FW-CADIS, and advanced parallel decomposition and tally methods optimized for scalability on supercomputing architectures. Shift has been validated and verified against various reactor physics benchmarks and compares well to other state-of-the-art Monte Carlo radiation transport codes such as MCNP5, CE KENO-VI, and OpenMC. Some specific benchmarks used for verification and validation include the CASL VERA criticality test suite and several Westinghouse AP1000® problems. These benchmark and scaling studies show promising results.

  1. TART98 a coupled neutron-photon 3-D, combinatorial geometry time dependent Monte Carlo Transport code

    SciTech Connect

    Cullen, D E

    1998-11-22

    TART98 is a coupled neutron-photon, 3 Dimensional, combinatorial geometry, time dependent Monte Carlo radiation transport code. This code can run on any modern computer. It is a complete system to assist you with input preparation, running Monte Carlo calculations, and analysis of output results. TART98 is also incredibly FAST; if you have used similar codes, you will be amazed at how fast this code is compared to other similar codes. Use of the entire system can save you a great deal of time and energy. TART98 is distributed on CD. This CD contains on-line documentation for all codes included in the system, the codes configured to run on a variety of computers, and many example problems that you can use to familiarize yourself with the system. TART98 completely supersedes all older versions of TART, and it is strongly recommended that users only use the most recent version of TART98 and its data files.

  2. Understanding transport simulations of heavy-ion collisions at 100 A and 400 A MeV: Comparison of heavy-ion transport codes under controlled conditions

    NASA Astrophysics Data System (ADS)

    Xu, Jun; Chen, Lie-Wen; Tsang, ManYee Betty; Wolter, Hermann; Zhang, Ying-Xun; Aichelin, Joerg; Colonna, Maria; Cozma, Dan; Danielewicz, Pawel; Feng, Zhao-Qing; Le Fèvre, Arnaud; Gaitanos, Theodoros; Hartnack, Christoph; Kim, Kyungil; Kim, Youngman; Ko, Che-Ming; Li, Bao-An; Li, Qing-Feng; Li, Zhu-Xia; Napolitani, Paolo; Ono, Akira; Papa, Massimo; Song, Taesoo; Su, Jun; Tian, Jun-Long; Wang, Ning; Wang, Yong-Jia; Weil, Janus; Xie, Wen-Jie; Zhang, Feng-Shou; Zhang, Guo-Qiang

    2016-04-01

    Transport simulations are very valuable for extracting physics information from heavy-ion-collision experiments. With the emergence of many different transport codes in recent years, it becomes important to estimate their robustness in extracting physics information from experiments. We report on the results of a transport-code-comparison project. Eighteen commonly used transport codes were included in this comparison: nine Boltzmann-Uehling-Uhlenbeck-type codes and nine quantum-molecular-dynamics-type codes. These codes have been asked to simulate Au +Au collisions using the same physics input for mean fields and for in-medium nucleon-nucleon cross sections, as well as the same impact parameter, the similar initialization setup, and other calculational parameters at 100 A and 400 A MeV incident energy. Among the codes we compare one-body observables such as rapidity and transverse flow distributions. We also monitor nonobservables such as the initialization of the internal states of colliding nuclei and their stability, the collision rates, and the Pauli blocking. We find that not completely identical initializations may have contributed partly to different evolutions. Different strategies to determine the collision probabilities and to enforce the Pauli blocking also produce considerably different results. There is a substantial spread in the predictions for the observables, which is much smaller at the higher incident energy. We quantify the uncertainties in the collective flow resulting from the simulation alone as about 30% at 100 A MeV and 13% at 400 A MeV, respectively. We propose further steps within the code comparison project to test the different aspects of transport simulations in a box calculation of infinite nuclear matter. This should, in particular, improve the robustness of transport model predictions at lower incident energies, where abundant amounts of data are available.

  3. The TORT three-dimensional discrete ordinates neutron/photon transport code (TORT version 3)

    SciTech Connect

    Rhoades, W.A.; Simpson, D.B.

    1997-10-01

    TORT calculates the flux or fluence of neutrons and/or photons throughout three-dimensional systems due to particles incident upon the system`s external boundaries, due to fixed internal sources, or due to sources generated by interaction with the system materials. The transport process is represented by the Boltzman transport equation. The method of discrete ordinates is used to treat the directional variable, and a multigroup formulation treats the energy dependence. Anisotropic scattering is treated using a Legendre expansion. Various methods are used to treat spatial dependence, including nodal and characteristic procedures that have been especially adapted to resist numerical distortion. A method of body overlay assists in material zone specification, or the specification can be generated by an external code supplied by the user. Several special features are designed to concentrate machine resources where they are most needed. The directional quadrature and Legendre expansion can vary with energy group. A discontinuous mesh capability has been shown to reduce the size of large problems by a factor of roughly three in some cases. The emphasis in this code is a robust, adaptable application of time-tested methods, together with a few well-tested extensions.

  4. A new multidimensional, energy-dependent two-moment transport code for neutrino-hydrodynamics

    NASA Astrophysics Data System (ADS)

    Just, O.; Obergaulinger, M.; Janka, H.-T.

    2015-11-01

    We present the new code ALCAR developed to model multidimensional, multienergy-group neutrino transport in the context of supernovae and neutron-star mergers. The algorithm solves the evolution equations of the zeroth- and first-order angular moments of the specific intensity, supplemented by an algebraic relation for the second-moment tensor to close the system. The scheme takes into account frame-dependent effects of the order O(v/c) as well as the most important types of neutrino interactions. The transport scheme is significantly more efficient than a multidimensional solver of the Boltzmann equation, while it is more accurate and consistent than the flux-limited diffusion method. The finite-volume discretization of the essentially hyperbolic system of moment equations employs methods well-known from hydrodynamics. For the time integration of the potentially stiff moment equations we employ a scheme in which only the local source terms are treated implicitly, while the advection terms are kept explicit, thereby allowing for an efficient computational parallelization of the algorithm. We investigate various problem set-ups in one and two dimensions to verify the implementation and to test the quality of the algebraic closure scheme. In our most detailed test, we compare a fully dynamic, one-dimensional core-collapse simulation with two published calculations performed with well-known Boltzmann-type neutrino-hydrodynamics codes and we find very satisfactory agreement.

  5. The near-field transport code Tullgarn and its use in performance assessment

    SciTech Connect

    Sellin, P.; Kjellbert, N.

    1993-12-31

    The near-field radionuclide migration code Tullgarn has been developed for performance assessment purposes. As a part of the PROPER-code package it has been successfully applied in the SKB 91 safety analysis. THe features and processes included in the code are: (1) Radioactive chain decay; (2) Different canister failure mechanisms (copper corrosion from sulphide attack, steel corrosion, internal overpressure and initially defective canisters); (3) Spent fuel dissolution. The model is based on the assumption that the dissolution rate is proportional to the {alpha}-dose rate; (4) Transport calculations are done with a resistance-network model. Tullgarn calculates the stationary release of radionuclides from a defect in the canister through the buffer and out into a fracture in the rock or up to the damaged zone under the deposition tunnel. Tullgarn can be used as a stand-alone model for near-field release calculations or as a submodel in an integrated assessment. In the SKB 91 analysis, Tullgarn gave the source term to the far-field model.

  6. TORAC User's Manual. A computer code for analyzing tornado-induced flow and material transport in nuclear facilities

    SciTech Connect

    Andrae, R.W.; Tang, P.K.; Martin, R.A.; Gregory, W.S.

    1985-05-01

    This manual describes the TORAC computer code, which can model tornado-induced flows, pressures, and material transport within structures. Future versions of this code will have improved analysis capabilities. In addition, it is part of a family of computer codes that is designed to provide improved methods of safety analysis for the nuclear industry. TORAC is directed toward the analysis of facility ventilation systems, including interconnected rooms and corridors. TORAC is an improved version of the TVENT computer code. In TORAC, blowers can be turned on and off and dampers can be controlled with an arbitrary time function. The material transport capability is very basic and includes convection, depletion, entrainment, and filtration of material. The input specifications for the code and a variety of sample problems are provided. 53 refs., 62 figs.

  7. Investigating the accuracy of the FLUKA code for transport of therapeutic ion beams in matter.

    PubMed

    Sommerer, Florian; Parodi, Katia; Ferrari, Alfredo; Poljanc, Karin; Enghardt, Wolfgang; Aiginger, Hannes

    2006-09-01

    In-beam positron emission tomography (PET) is currently used for monitoring the dose delivery at the heavy ion therapy facility at GSI Darmstadt. The method is based on the fact that carbon ions produce positron emitting isotopes in fragmentation reactions with the atomic nuclei of the tissue. The relation between dose and beta(+)-activity is not straightforward. Hence it is not possible to infer the delivered dose directly from the PET distribution. To overcome this problem and enable therapy monitoring, beta(+)-distributions are simulated on the basis of the treatment plan and compared with the measured ones. Following the positive clinical impact, it is planned to apply the method at future ion therapy facilities, where beams from protons up to oxygen nuclei will be available. A simulation code capable of handling all these ions and predicting the irradiation-induced beta(+)-activity distributions is desirable. An established and general purpose radiation transport code is preferred. FLUKA is a candidate for such a code. For application to in-beam PET therapy monitoring, the code has to model with high accuracy both the electromagnetic and nuclear interactions responsible for dose deposition and beta(+)-activity production, respectively. In this work, the electromagnetic interaction in FLUKA was adjusted to reproduce the same particle range as from the experimentally validated treatment planning software TRiP, used at GSI. Furthermore, projectile fragmentation spectra in water targets have been studied in comparison to available experimental data. Finally, cross sections for the production of the most abundant fragments have been calculated and compared to values found in the literature. PMID:16912388

  8. Static & Dynamic Response of 2D Solids

    1996-07-15

    NIKE2D is an implicit finite-element code for analyzing the finite deformation, static and dynamic response of two-dimensional, axisymmetric, plane strain, and plane stress solids. The code is fully vectorized and available on several computing platforms. A number of material models are incorporated to simulate a wide range of material behavior including elasto-placicity, anisotropy, creep, thermal effects, and rate dependence. Slideline algorithms model gaps and sliding along material interfaces, including interface friction, penetration and single surfacemore » contact. Interactive-graphics and rezoning is included for analyses with large mesh distortions. In addition to quasi-Newton and arc-length procedures, adaptive algorithms can be defined to solve the implicit equations using the solution language ISLAND. Each of these capabilities and more make NIKE2D a robust analysis tool.« less

  9. Coupled Neutron-Photon, 3-D, Combinatorial Geometry, Time Dependent, Monte Carlo Transport Code System.

    2013-06-24

    Version 07 TART2012 is a coupled neutron-photon Monte Carlo transport code designed to use three-dimensional (3-D) combinatorial geometry. Neutron and/or photon sources as well as neutron induced photon production can be tracked. It is a complete system to assist you with input preparation, running Monte Carlo calculations, and analysis of output results. TART2012 is also incredibly FAST; if you have used similar codes, you will be amazed at how fast this code is compared tomore » other similar codes. Use of the entire system can save you a great deal of time and energy. TART2012 extends the general utility of the code to even more areas of application than available in previous releases by concentrating on improving the physics, particularly with regard to improved treatment of neutron fission, resonance self-shielding, molecular binding, and extending input options used by the code. Several utilities are included for creating input files and displaying TART results and data. TART2012 uses the latest ENDF/B-VI, Release 8, data. New for TART2012 is the use of continuous energy neutron cross sections, in addition to its traditional multigroup cross sections. For neutron interaction, the data are derived using ENDF-ENDL2005 and include both continuous energy cross sections and 700 group neutron data derived using a combination of ENDF/B-VI, Release 8, and ENDL data. The 700 group structure extends from 10-5 eV up to 1 GeV. Presently nuclear data are only available up to 20 MeV, so that only 616 of the groups are currently used. For photon interaction, 701 point photon data were derived using the Livermore EPDL97 file. The new 701 point structure extends from 100 eV up to 1 GeV, and is currently used over this entire energy range. TART2012 completely supersedes all older versions of TART, and it is strongly recommended that one use only the most recent version of TART2012 and its data files. Check author’s homepage for related information: http

  10. Compact 2-D graphical representation of DNA

    NASA Astrophysics Data System (ADS)

    Randić, Milan; Vračko, Marjan; Zupan, Jure; Novič, Marjana

    2003-05-01

    We present a novel 2-D graphical representation for DNA sequences which has an important advantage over the existing graphical representations of DNA in being very compact. It is based on: (1) use of binary labels for the four nucleic acid bases, and (2) use of the 'worm' curve as template on which binary codes are placed. The approach is illustrated on DNA sequences of the first exon of human β-globin and gorilla β-globin.

  11. TACO (2D AND 3D). Taco

    SciTech Connect

    Mason, W.E.

    1983-03-01

    A set of finite element codes for the solution of nonlinear, two-dimensional (TACO2D) and three-dimensional (TACO3D) heat transfer problems. Performs linear and nonlinear analyses of both transient and steady state heat transfer problems. Has the capability to handle time or temperature dependent material properties. Materials may be either isotropic or orthotropic. A variety of time and temperature dependent boundary conditions and loadings are available including temperature, flux, convection, radiation, and internal heat generation.

  12. DOGS: a collection of graphics for support of discrete ordinates codes

    SciTech Connect

    Ingersoll, D.T.; Slater, C.O.

    1980-03-01

    A collection of computer codes called DOGS (Discrete Ordinates Graphics Support) has been developed to assist in the display and presentation of data generated by commonly used discrete ordinates transport codes. The DOGS codes include: EGAD for plotting two-dimensional geometries, ISOPLOT4 for plotting 2-D fluxes in a contour line fashion, FORM for plotting 2-D fluxes in a 3-D surface fashion, ACTUAL for calculating 2-D activities, TOOTH for calculating and plotting space-energy contributon fluxes, and ASPECT for plotting energy spectra. All of the codes use FIDO input formats and DISSPLA graphics software including the DISSPOP post processors.

  13. PyMercury: Interactive Python for the Mercury Monte Carlo Particle Transport Code

    SciTech Connect

    Iandola, F N; O'Brien, M J; Procassini, R J

    2010-11-29

    Monte Carlo particle transport applications are often written in low-level languages (C/C++) for optimal performance on clusters and supercomputers. However, this development approach often sacrifices straightforward usability and testing in the interest of fast application performance. To improve usability, some high-performance computing applications employ mixed-language programming with high-level and low-level languages. In this study, we consider the benefits of incorporating an interactive Python interface into a Monte Carlo application. With PyMercury, a new Python extension to the Mercury general-purpose Monte Carlo particle transport code, we improve application usability without diminishing performance. In two case studies, we illustrate how PyMercury improves usability and simplifies testing and validation in a Monte Carlo application. In short, PyMercury demonstrates the value of interactive Python for Monte Carlo particle transport applications. In the future, we expect interactive Python to play an increasingly significant role in Monte Carlo usage and testing.

  14. Gravitational Wave Signals from 2D and 3D Core Collapse Supernova Explosions

    NASA Astrophysics Data System (ADS)

    Yakunin, Konstantin; Mezzacappa, Anthony; Marronetti, Pedro; Bruenn, Stephen; Hix, W. Raphael; Lentz, Eric J.; Messer, O. E. Bronson; Harris, J. Austin; Endeve, Eirik; Blondin, John

    2016-03-01

    We study two- and three-dimensional (2D and 3D) core-collapse supernovae (CCSN) using our first-principles CCSN simulations performed with the neutrino hydrodynamics code CHIMERA. The following physics is included: Newtonian hydrodynamics with a nuclear equation of state capable of describing matter in both NSE and non-NSE, MGFLD neutrino transport with realistic neutrino interactions, an effective GR gravitational potential, and a nuclear reaction network. Both our 2D and 3D models achieve explosion, which in turn enables us to determine their complete gravitational wave signals. In this talk, we present them, and we analyze the similarities and differences between the 2D and 3D signals.

  15. 3D Direct Simulation Monte Carlo Code Which Solves for Geometrics

    1998-01-13

    Pegasus is a 3D Direct Simulation Monte Carlo Code which solves for geometries which can be represented by bodies of revolution. Included are all the surface chemistry enhancements in the 2D code Icarus as well as a real vacuum pump model. The code includes multiple species transport.

  16. PEGASUS. 3D Direct Simulation Monte Carlo Code Which Solves for Geometrics

    SciTech Connect

    Bartel, T.J.

    1998-12-01

    Pegasus is a 3D Direct Simulation Monte Carlo Code which solves for geometries which can be represented by bodies of revolution. Included are all the surface chemistry enhancements in the 2D code Icarus as well as a real vacuum pump model. The code includes multiple species transport.

  17. Steady-State Gyrokinetics Transport Code (SSGKT), A Scientific Application Partnership with the Framework Application for Core-Edge Transport Simulations, Final Report

    SciTech Connect

    Fahey, Mark R.; Candy, Jeff

    2013-11-07

    This project initiated the development of TGYRO ? a steady-state Gyrokinetic transport code (SSGKT) that integrates micro-scale GYRO turbulence simulations into a framework for practical multi-scale simulation of conventional tokamaks as well as future reactors. Using a lightweight master transport code, multiple independent (each massively parallel) gyrokinetic simulations are coordinated. The capability to evolve profiles using the TGLF model was also added to TGYRO and represents a more typical use-case for TGYRO. The goal of the project was to develop a steady-state Gyrokinetic transport code (SSGKT) that integrates micro-scale gyrokinetic turbulence simulations into a framework for practical multi-scale simulation of a burning plasma core ? the International Thermonuclear Experimental Reactor (ITER) in particular. This multi-scale simulation capability will be used to predict the performance (the fusion energy gain, Q) given the H-mode pedestal temperature and density. At present, projections of this type rely on transport models like GLF23, which are based on rather approximate fits to the results of linear and nonlinear simulations. Our goal is to make these performance projections with precise nonlinear gyrokinetic simulations. The method of approach is to use a lightweight master transport code to coordinate multiple independent (each massively parallel) gyrokinetic simulations using the GYRO code. This project targets the practical multi-scale simulation of a reactor core plasma in order to predict the core temperature and density profiles given the H-mode pedestal temperature and density. A master transport code will provide feedback to O(16) independent gyrokinetic simulations (each massively parallel). A successful feedback scheme offers a novel approach to predictive modeling of an important national and international problem. Success in this area of fusion simulations will allow US scientists to direct the research path of ITER over the next two

  18. High divergent 2D grating

    NASA Astrophysics Data System (ADS)

    Wang, Jin; Ma, Jianyong; Zhou, Changhe

    2014-11-01

    A 3×3 high divergent 2D-grating with period of 3.842μm at wavelength of 850nm under normal incidence is designed and fabricated in this paper. This high divergent 2D-grating is designed by the vector theory. The Rigorous Coupled Wave Analysis (RCWA) in association with the simulated annealing (SA) is adopted to calculate and optimize this 2D-grating.The properties of this grating are also investigated by the RCWA. The diffraction angles are more than 10 degrees in the whole wavelength band, which are bigger than the traditional 2D-grating. In addition, the small period of grating increases the difficulties of fabrication. So we fabricate the 2D-gratings by direct laser writing (DLW) instead of traditional manufacturing method. Then the method of ICP etching is used to obtain the high divergent 2D-grating.

  19. Computer codes for the evaluation of thermodynamic and transport properties for equilibrium air to 30000 K

    NASA Technical Reports Server (NTRS)

    Thompson, Richard A.; Lee, Kam-Pui; Gupta, Roop N.

    1991-01-01

    The computer codes developed here provide self-consistent thermodynamic and transport properties for equilibrium air for temperatures from 500 to 30000 K over a temperature range of 10 (exp -4) to 10 (exp -2) atm. These properties are computed through the use of temperature dependent curve fits for discrete values of pressure. Interpolation is employed for intermediate values of pressure. The curve fits are based on mixture values calculated from an 11-species air model. Individual species properties used in the mixture relations are obtained from a recent study by the present authors. A review and discussion of the sources and accuracy of the curve fitted data used herein are given in NASA RP 1260.

  20. Applications of Transport/Reaction Codes to Problems in Cell Modeling

    SciTech Connect

    MEANS, SHAWN A.; RINTOUL, MARK DANIEL; SHADID, JOHN N.

    2001-11-01

    We demonstrate two specific examples that show how our exiting capabilities in solving large systems of partial differential equations associated with transport/reaction systems can be easily applied to outstanding problems in computational biology. First, we examine a three-dimensional model for calcium wave propagation in a Xenopus Laevis frog egg and verify that a proposed model for the distribution of calcium release sites agrees with experimental results as a function of both space and time. Next, we create a model of the neuron's terminus based on experimental observations and show that the sodium-calcium exchanger is not the route of sodium's modulation of neurotransmitter release. These state-of-the-art simulations were performed on massively parallel platforms and required almost no modification of existing Sandia codes.

  1. Development and validation of a GEANT4 radiation transport code for CT dosimetry

    PubMed Central

    Carver, DE; Kost, SD; Fernald, MJ; Lewis, KG; Fraser, ND; Pickens, DR; Price, RR; Stabin, MG

    2014-01-01

    We have created a radiation transport code using the GEANT4 Monte Carlo toolkit to simulate pediatric patients undergoing CT examinations. The focus of this paper is to validate our simulation with real-world physical dosimetry measurements using two independent techniques. Exposure measurements were made with a standard 100-mm CT pencil ionization chamber, and absorbed doses were also measured using optically stimulated luminescent (OSL) dosimeters. Measurements were made in air, a standard 16-cm acrylic head phantom, and a standard 32-cm acrylic body phantom. Physical dose measurements determined from the ionization chamber in air for 100 and 120 kVp beam energies were used to derive photon-fluence calibration factors. Both ion chamber and OSL measurement results provide useful comparisons in the validation of our Monte Carlo simulations. We found that simulated and measured CTDI values were within an overall average of 6% of each other. PMID:25706135

  2. Space applications of the MITS electron-photon Monte Carlo transport code system

    SciTech Connect

    Kensek, R.P.; Lorence, L.J.; Halbleib, J.A.; Morel, J.E.

    1996-07-01

    The MITS multigroup/continuous-energy electron-photon Monte Carlo transport code system has matured to the point that it is capable of addressing more realistic three-dimensional adjoint applications. It is first employed to efficiently predict point doses as a function of source energy for simple three-dimensional experimental geometries exposed to simulated uniform isotropic planar sources of monoenergetic electrons up to 4.0 MeV. Results are in very good agreement with experimental data. It is then used to efficiently simulate dose to a detector in a subsystem of a GPS satellite due to its natural electron environment, employing a relatively complex model of the satellite. The capability for survivability analysis of space systems is demonstrated, and results are obtained with and without variance reduction.

  3. Implementation, capabilities, and benchmarking of Shift, a massively parallel Monte Carlo radiation transport code

    NASA Astrophysics Data System (ADS)

    Pandya, Tara M.; Johnson, Seth R.; Evans, Thomas M.; Davidson, Gregory G.; Hamilton, Steven P.; Godfrey, Andrew T.

    2016-03-01

    This work discusses the implementation, capabilities, and validation of Shift, a massively parallel Monte Carlo radiation transport package authored at Oak Ridge National Laboratory. Shift has been developed to scale well from laptops to small computing clusters to advanced supercomputers and includes features such as support for multiple geometry and physics engines, hybrid capabilities for variance reduction methods such as the Consistent Adjoint-Driven Importance Sampling methodology, advanced parallel decompositions, and tally methods optimized for scalability on supercomputing architectures. The scaling studies presented in this paper demonstrate good weak and strong scaling behavior for the implemented algorithms. Shift has also been validated and verified against various reactor physics benchmarks, including the Consortium for Advanced Simulation of Light Water Reactors' Virtual Environment for Reactor Analysis criticality test suite and several Westinghouse AP1000® problems presented in this paper. These benchmark results compare well to those from other contemporary Monte Carlo codes such as MCNP5 and KENO.

  4. Development and validation of a GEANT4 radiation transport code for CT dosimetry.

    PubMed

    Carver, D E; Kost, S D; Fernald, M J; Lewis, K G; Fraser, N D; Pickens, D R; Price, R R; Stabin, M G

    2015-04-01

    The authors have created a radiation transport code using the GEANT4 Monte Carlo toolkit to simulate pediatric patients undergoing CT examinations. The focus of this paper is to validate their simulation with real-world physical dosimetry measurements using two independent techniques. Exposure measurements were made with a standard 100-mm CT pencil ionization chamber, and absorbed doses were also measured using optically stimulated luminescent (OSL) dosimeters. Measurements were made in air with a standard 16-cm acrylic head phantom and with a standard 32-cm acrylic body phantom. Physical dose measurements determined from the ionization chamber in air for 100 and 120 kVp beam energies were used to derive photon-fluence calibration factors. Both ion chamber and OSL measurement results provide useful comparisons in the validation of the Monte Carlo simulations. It was found that simulated and measured CTDI values were within an overall average of 6% of each other. PMID:25706135

  5. A Complex-Geometry Validation Experiment for Advanced Neutron Transport Codes

    SciTech Connect

    David W. Nigg; Anthony W. LaPorta; Joseph W. Nielsen; James Parry; Mark D. DeHart; Samuel E. Bays; William F. Skerjanc

    2013-11-01

    The Idaho National Laboratory (INL) has initiated a focused effort to upgrade legacy computational reactor physics software tools and protocols used for support of core fuel management and experiment management in the Advanced Test Reactor (ATR) and its companion critical facility (ATRC) at the INL.. This will be accomplished through the introduction of modern high-fidelity computational software and protocols, with appropriate new Verification and Validation (V&V) protocols, over the next 12-18 months. Stochastic and deterministic transport theory based reactor physics codes and nuclear data packages that support this effort include MCNP5[1], SCALE/KENO6[2], HELIOS[3], SCALE/NEWT[2], and ATTILA[4]. Furthermore, a capability for sensitivity analysis and uncertainty quantification based on the TSUNAMI[5] system has also been implemented. Finally, we are also evaluating the Serpent[6] and MC21[7] codes, as additional verification tools in the near term as well as for possible applications to full three-dimensional Monte Carlo based fuel management modeling in the longer term. On the experimental side, several new benchmark-quality code validation measurements based on neutron activation spectrometry have been conducted using the ATRC. Results for the first four experiments, focused on neutron spectrum measurements within the Northwest Large In-Pile Tube (NW LIPT) and in the core fuel elements surrounding the NW LIPT and the diametrically opposite Southeast IPT have been reported [8,9]. A fifth, very recent, experiment focused on detailed measurements of the element-to-element core power distribution is summarized here and examples of the use of the measured data for validation of corresponding MCNP5, HELIOS, NEWT, and Serpent computational models using modern least-square adjustment methods are provided.

  6. Comparison of Radiation Transport Codes, HZETRN, HETC and FLUKA, Using the 1956 Webber SPE Spectrum

    NASA Technical Reports Server (NTRS)

    Heinbockel, John H.; Slaba, Tony C.; Blattnig, Steve R.; Tripathi, Ram K.; Townsend, Lawrence W.; Handler, Thomas; Gabriel, Tony A.; Pinsky, Lawrence S.; Reddell, Brandon; Clowdsley, Martha S.; Singleterry, Robert C.; Norbury, John W.; Badavi, Francis F.; Aghara, Sukesh K.

    2009-01-01

    Protection of astronauts and instrumentation from galactic cosmic rays (GCR) and solar particle events (SPE) in the harsh environment of space is of prime importance in the design of personal shielding, spacec raft, and mission planning. Early entry of radiation constraints into the design process enables optimal shielding strategies, but demands efficient and accurate tools that can be used by design engineers in every phase of an evolving space project. The radiation transport code , HZETRN, is an efficient tool for analyzing the shielding effectiveness of materials exposed to space radiation. In this paper, HZETRN is compared to the Monte Carlo codes HETC-HEDS and FLUKA, for a shield/target configuration comprised of a 20 g/sq cm Aluminum slab in front of a 30 g/cm^2 slab of water exposed to the February 1956 SPE, as mode led by the Webber spectrum. Neutron and proton fluence spectra, as well as dose and dose equivalent values, are compared at various depths in the water target. This study shows that there are many regions where HZETRN agrees with both HETC-HEDS and FLUKA for this shield/target configuration and the SPE environment. However, there are also regions where there are appreciable differences between the three computer c odes.

  7. Measured performances on vectorization and multitasking with a Monte Carlo code for neutron transport problems

    NASA Astrophysics Data System (ADS)

    Chauvet, Yves

    1985-07-01

    This paper summarized two improvements of a real production code by using vectorization and multitasking techniques. After a short description of Monte Carlo algorithms employed in our neutron transport problems, we briefly describe the work we have done in order to get a vector code. Vectorization principles will be presented and measured performances on the CRAY 1S, CYBER 205 and CRAY X-MP compared in terms of vector lengths. The second part of this work is an adaptation to multitasking on the CRAY X-MP using exclusively standard multitasking tools available with FORTRAN under the COS 1.13 system. Two examples will be presented. The goal of the first one is to measure the overhead inherent to multitasking when tasks become too small and to define a granularity threshold that is to say a minimum size for a task. With the second example we propose a method that is very X-MP oriented in order to get the best speedup factor on such a computer. In conclusion we prove that Monte Carlo algorithms are very well suited to future vector and parallel computers.

  8. EBQ code: transport of space-charge beams in axially symmetric devices

    SciTech Connect

    Paul, A.C.

    1982-11-01

    Such general-purpose space charge codes as EGUN, BATES, WOLF, and TRANSPORT do not gracefully accommodate the simulation of relativistic space-charged beams propagating a long distance in axially symmetric devices where a high degree of cancellation has occurred between the self-magnetic and self-electric forces of the beam. The EBQ code was written specifically to follow high current beam particles where space charge is important in long distance flight in axially symmetric machines possessing external electric and magnetic field. EBQ simultaneously tracks all trajectories so as to allow procedures for charge deposition based on inter-ray separations. The orbits are treated in Cartesian geometry (position and momentum) with z as the independent variable. Poisson's equation is solved in cylindrical geometry on an orthogonal rectangular mesh. EBQ can also handle problems involving multiple ion species where the space charge from each must be included. Such problems arise in the design of ion sources where different charge and mass states are present.

  9. A one-and-a-quarter-dimensional transport code for field-reversed configuration studies: A user's guide for CFRX

    SciTech Connect

    Hsiao, Ming-Yuan; Werley, K.A.; Ling, Kuok-Mee

    1988-05-01

    A one-and-a-quarter-dimensional transport code, which includes radial as well as some two-dimensional effects for field-reversed configurations, is described. The set of transport equations is transformed to a set of new independent and dependent variables and is solved as a coupled initial-boundary value problem. The code simulation includes both the closed and open field regions. The axial effects incorporated include global axial force balance, axial losses in the open field region, and flux surface averaging over the closed field region. Input, output, and structure of the code are described in detail. A typical example of the code results is also given. 20 refs., 21 figs., 7 tabs.

  10. Generic reactive transport codes as flexible tools to integrate soil organic matter degradation models with water, transport and geochemistry in soils

    NASA Astrophysics Data System (ADS)

    Jacques, Diederik; Gérard, Fréderic; Mayer, Uli; Simunek, Jirka; Leterme, Bertrand

    2016-04-01

    A large number of organic matter degradation, CO2 transport and dissolved organic matter models have been developed during the last decades. However, organic matter degradation models are in many cases strictly hard-coded in terms of organic pools, degradation kinetics and dependency on environmental variables. The scientific input of the model user is typically limited to the adjustment of input parameters. In addition, the coupling with geochemical soil processes including aqueous speciation, pH-dependent sorption and colloid-facilitated transport are not incorporated in many of these models, strongly limiting the scope of their application. Furthermore, the most comprehensive organic matter degradation models are combined with simplified representations of flow and transport processes in the soil system. We illustrate the capability of generic reactive transport codes to overcome these shortcomings. The formulations of reactive transport codes include a physics-based continuum representation of flow and transport processes, while biogeochemical reactions can be described as equilibrium processes constrained by thermodynamic principles and/or kinetic reaction networks. The flexibility of these type of codes allows for straight-forward extension of reaction networks, permits the inclusion of new model components (e.g.: organic matter pools, rate equations, parameter dependency on environmental conditions) and in such a way facilitates an application-tailored implementation of organic matter degradation models and related processes. A numerical benchmark involving two reactive transport codes (HPx and MIN3P) demonstrates how the process-based simulation of transient variably saturated water flow (Richards equation), solute transport (advection-dispersion equation), heat transfer and diffusion in the gas phase can be combined with a flexible implementation of a soil organic matter degradation model. The benchmark includes the production of leachable organic matter

  11. Development of Parallel Computing Framework to Enhance Radiation Transport Code Capabilities for Rare Isotope Beam Facility Design

    SciTech Connect

    Kostin, Mikhail; Mokhov, Nikolai; Niita, Koji

    2013-09-25

    A parallel computing framework has been developed to use with general-purpose radiation transport codes. The framework was implemented as a C++ module that uses MPI for message passing. It is intended to be used with older radiation transport codes implemented in Fortran77, Fortran 90 or C. The module is significantly independent of radiation transport codes it can be used with, and is connected to the codes by means of a number of interface functions. The framework was developed and tested in conjunction with the MARS15 code. It is possible to use it with other codes such as PHITS, FLUKA and MCNP after certain adjustments. Besides the parallel computing functionality, the framework offers a checkpoint facility that allows restarting calculations with a saved checkpoint file. The checkpoint facility can be used in single process calculations as well as in the parallel regime. The framework corrects some of the known problems with the scheduling and load balancing found in the original implementations of the parallel computing functionality in MARS15 and PHITS. The framework can be used efficiently on homogeneous systems and networks of workstations, where the interference from the other users is possible.

  12. Combining node-centered parallel radiation transport and higher-order multi-material cell-centered hydrodynamics methods in three-temperature radiation hydrodynamics code TRHD

    NASA Astrophysics Data System (ADS)

    Sijoy, C. D.; Chaturvedi, S.

    2016-06-01

    Higher-order cell-centered multi-material hydrodynamics (HD) and parallel node-centered radiation transport (RT) schemes are combined self-consistently in three-temperature (3T) radiation hydrodynamics (RHD) code TRHD (Sijoy and Chaturvedi, 2015) developed for the simulation of intense thermal radiation or high-power laser driven RHD. For RT, a node-centered gray model implemented in a popular RHD code MULTI2D (Ramis et al., 2009) is used. This scheme, in principle, can handle RT in both optically thick and thin materials. The RT module has been parallelized using message passing interface (MPI) for parallel computation. Presently, for multi-material HD, we have used a simple and robust closure model in which common strain rates to all materials in a mixed cell is assumed. The closure model has been further generalized to allow different temperatures for the electrons and ions. In addition to this, electron and radiation temperatures are assumed to be in non-equilibrium. Therefore, the thermal relaxation between the electrons and ions and the coupling between the radiation and matter energies are required to be computed self-consistently. This has been achieved by using a node-centered symmetric-semi-implicit (SSI) integration scheme. The electron thermal conduction is calculated using a cell-centered, monotonic, non-linear finite volume scheme (NLFV) suitable for unstructured meshes. In this paper, we have described the details of the 2D, 3T, non-equilibrium, multi-material RHD code developed with a special attention to the coupling of various cell-centered and node-centered formulations along with a suite of validation test problems to demonstrate the accuracy and performance of the algorithms. We also report the parallel performance of RT module. Finally, in order to demonstrate the full capability of the code implementation, we have presented the simulation of laser driven shock propagation in a layered thin foil. The simulation results are found to be in good

  13. Combining node-centered parallel radiation transport and higher-order multi-material cell-centered hydrodynamics methods in three-temperature radiation hydrodynamics code TRHD

    NASA Astrophysics Data System (ADS)

    Sijoy, C. D.; Chaturvedi, S.

    2016-06-01

    Higher-order cell-centered multi-material hydrodynamics (HD) and parallel node-centered radiation transport (RT) schemes are combined self-consistently in three-temperature (3T) radiation hydrodynamics (RHD) code TRHD (Sijoy and Chaturvedi, 2015) developed for the simulation of intense thermal radiation or high-power laser driven RHD. For RT, a node-centered gray model implemented in a popular RHD code MULTI2D (Ramis et al., 2009) is used. This scheme, in principle, can handle RT in both optically thick and thin materials. The RT module has been parallelized using message passing interface (MPI) for parallel computation. Presently, for multi-material HD, we have used a simple and robust closure model in which common strain rates to all materials in a mixed cell is assumed. The closure model has been further generalized to allow different temperatures for the electrons and ions. In addition to this, electron and radiation temperatures are assumed to be in non-equilibrium. Therefore, the thermal relaxation between the electrons and ions and the coupling between the radiation and matter energies are required to be computed self-consistently. This has been achieved by using a node-centered symmetric-semi-implicit (SSI) integration scheme. The electron thermal conduction is calculated using a cell-centered, monotonic, non-linear finite volume scheme (NLFV) suitable for unstructured meshes. In this paper, we have described the details of the 2D, 3T, non-equilibrium, multi-material RHD code developed with a special attention to the coupling of various cell-centered and node-centered formulations along with a suite of validation test problems to demonstrate the accuracy and performance of the algorithms. We also report the parallel performance of RT module. Finally, in order to demonstrate the full capability of the code implementation, we have presented the simulation of laser driven shock propagation in a layered thin foil. The simulation results are found to be in good

  14. An Extension of the Athena++ Code Framework for GRMHD Based on Advanced Riemann Solvers and Staggered-mesh Constrained Transport

    NASA Astrophysics Data System (ADS)

    White, Christopher J.; Stone, James M.; Gammie, Charles F.

    2016-08-01

    We present a new general relativistic magnetohydrodynamics (GRMHD) code integrated into the Athena++ framework. Improving upon the techniques used in most GRMHD codes, ours allows the use of advanced, less diffusive Riemann solvers, in particular HLLC and HLLD. We also employ a staggered-mesh constrained transport algorithm suited for curvilinear coordinate systems in order to maintain the divergence-free constraint of the magnetic field. Our code is designed to work with arbitrary stationary spacetimes in one, two, or three dimensions, and we demonstrate its reliability through a number of tests. We also report on its promising performance and scalability.

  15. Breach, Leach, and Transport-Multiple Species UNCERT

    2006-04-01

    BLTPLOT_UNCERT is a FORTRAN code developed to facilitate plotting of 2-D concentration data for the Nuclear Regulatory Commission code called Breach, Leach, and Transport - Multiple Species (BLT-MS). BLTPLOT_UNCERT is open-source code. It functions under a DOS window.

  16. Recent Progress in the Development of a Multi-Layer Green's Function Code for Ion Beam Transport

    NASA Technical Reports Server (NTRS)

    Tweed, John; Walker, Steven A.; Wilson, John W.; Tripathi, Ram K.

    2008-01-01

    To meet the challenge of future deep space programs, an accurate and efficient engineering code for analyzing the shielding requirements against high-energy galactic heavy radiation is needed. To address this need, a new Green's function code capable of simulating high charge and energy ions with either laboratory or space boundary conditions is currently under development. The computational model consists of combinations of physical perturbation expansions based on the scales of atomic interaction, multiple scattering, and nuclear reactive processes with use of the Neumann-asymptotic expansions with non-perturbative corrections. The code contains energy loss due to straggling, nuclear attenuation, nuclear fragmentation with energy dispersion and downshifts. Previous reports show that the new code accurately models the transport of ion beams through a single slab of material. Current research efforts are focused on enabling the code to handle multiple layers of material and the present paper reports on progress made towards that end.

  17. The Candida albicans CDR3 gene codes for an opaque-phase ABC transporter.

    PubMed Central

    Balan, I; Alarco, A M; Raymond, M

    1997-01-01

    We report the cloning and functional analysis of a third member of the CDR gene family in Candida albicans, named CDR3. This gene codes for an ABC (ATP-binding cassette) transporter of 1,501 amino acids highly homologous to Cdr1p and Cdr2p (56 and 55% amino acid sequence identity, respectively), two transporters involved in fluconazole resistance in C. albicans. The predicted structure of Cdr3p is typical of the PDR/CDR family, with two similar halves, each comprising an N-terminal hydrophilic domain with consensus sequences for ATP binding and a C-terminal hydrophobic domain with six predicted transmembrane segments. Northern analysis showed that CDR3 expression is regulated in a cell-type-specific manner, with low levels of CDR3 mRNA in CAI4 yeast and hyphal cells, high levels in WO-1 opaque cells, and undetectable levels in WO-1 white cells. Disruption of both alleles of CDR3 in CAI4 resulted in no obvious changes in cell morphology, growth rate, or susceptibility to fluconazole. Overexpression of Cdr3p in C. albicans did not result in increased cellular resistance to fluconazole, cycloheximide, and 4-nitroquinoline-N-oxide, which are known substrates for different transporters of the PDR/CDR family. These results indicate that despite a high degree of sequence conservation with C. albicans Cdr1p and Cdr2p, Cdr3p does not appear to be involved in drug resistance, at least to the compounds tested which include the clinically relevant antifungal agent fluconazole. Rather, the high level of Cdr3p expression in WO-1 opaque cells suggests an opaque-phase-associated biological function which remains to be identified. PMID:9393682

  18. Generation of discrete scattering cross sections and demonstration of Monte Carlo charged particle transport in the Milagro IMC code package

    SciTech Connect

    Walsh, J. A.; Palmer, T. S.; Urbatsch, T. J.

    2013-07-01

    A new method for generating discrete scattering cross sections to be used in charged particle transport calculations is investigated. The method of data generation is presented and compared to current methods for obtaining discrete cross sections. The new, more generalized approach allows greater flexibility in choosing a cross section model from which to derive discrete values. Cross section data generated with the new method is verified through a comparison with discrete data obtained with an existing method. Additionally, a charged particle transport capability is demonstrated in the time-dependent Implicit Monte Carlo radiative transfer code package, Milagro. The implementation of this capability is verified using test problems with analytic solutions as well as a comparison of electron dose-depth profiles calculated with Milagro and an already-established electron transport code. An initial investigation of a preliminary integration of the discrete cross section generation method with the new charged particle transport capability in Milagro is also presented. (authors)

  19. Radiation transport codes for potential applications related to radiobiology and radiotherapy using protons, neutrons, and negatively charged pions

    NASA Technical Reports Server (NTRS)

    Armstrong, T. W.

    1972-01-01

    Several Monte Carlo radiation transport computer codes are used to predict quantities of interest in the fields of radiotherapy and radiobiology. The calculational methods are described and comparisions of calculated and experimental results are presented for dose distributions produced by protons, neutrons, and negatively charged pions. Comparisons of calculated and experimental cell survival probabilities are also presented.

  20. 76 FR 2744 - Disclosure of Code-Share Service by Air Carriers and Sellers of Air Transportation

    Federal Register 2010, 2011, 2012, 2013, 2014

    2011-01-14

    ... Office of the Secretary Disclosure of Code-Share Service by Air Carriers and Sellers of Air...-share service on Internet Web sites and elsewhere by air carriers, their agents, and third party sellers of air transportation in view of recent amendments to 49 U.S.C. 41712. FOR FURTHER...

  1. Experiences in the Performance Analysis and Optimization of a Deterministic Radiation Transport Code on the Cray SV1

    SciTech Connect

    Peter Cebull

    2004-05-01

    The Attila radiation transport code, which solves the Boltzmann neutron transport equation on three-dimensional unstructured tetrahedral meshes, was ported to a Cray SV1. Cray's performance analysis tools pointed to two subroutines that together accounted for 80%-90% of the total CPU time. Source code modifications were performed to enable vectorization of the most significant loops, to correct unfavorable strides through memory, and to replace a conjugate gradient solver subroutine with a call to the Cray Scientific Library. These optimizations resulted in a speedup of 7.79 for the INEEL's largest ATR model. Parallel scalability of the OpenMP version of the code is also discussed, and timing results are given for other non-vector platforms.

  2. Radiation environment at the Moon: Comparisons of transport code modeling and measurements from the CRaTER instrument

    NASA Astrophysics Data System (ADS)

    Porter, Jamie A.; Townsend, Lawrence W.; Spence, Harlan; Golightly, Michael; Schwadron, Nathan; Kasper, Justin; Case, Anthony W.; Blake, John B.; Zeitlin, Cary

    2014-06-01

    The Cosmic Ray Telescope for the Effects of Radiation (CRaTER), an instrument carried on the Lunar Reconnaissance Orbiter spacecraft, directly measures the energy depositions by solar and galactic cosmic radiations in its silicon wafer detectors. These energy depositions are converted to linear energy transfer (LET) spectra. High LET particles, which are mainly high-energy heavy ions found in the incident cosmic ray spectrum, or target fragments and recoils produced by protons and heavier ions, are of particular importance because of their potential to cause significant damage to human tissue and electronic components. Aside from providing LET data useful for space radiation risk analyses for lunar missions, the observed LET spectra can also be used to help validate space radiation transport codes, used for shielding design and risk assessment applications, which is a major thrust of this work. In this work the Monte Carlo transport code HETC-HEDS (High-Energy Transport Code-Human Exploration and Development in Space) is used to estimate LET contributions from the incident primary ions and their charged secondaries produced by nuclear collisions as they pass through the three pairs of silicon detectors. Also in this work, the contributions to the LET of the primary ions and their charged secondaries are analyzed and compared with estimates obtained using the deterministic space radiation code HZETRN 2010, developed at NASA Langley Research Center. LET estimates obtained from the two transport codes are compared with measurements of LET from the CRaTER instrument during the mission. Overall, a comparison of the LET predictions of the HETC-HEDS code to the predictions of the HZETRN code displays good agreement. The code predictions are also in good agreement with the CRaTER LET measurements above 15 keV/µm but differ from the measurements for smaller values of LET. A possible reason for this disagreement between measured and calculated spectra below 15 keV/µm is an

  3. Amanzi and Akuna: Two New Community Codes for Subsurface Contaminant Flow and Transport

    NASA Astrophysics Data System (ADS)

    Dixon, P. R.; Moulton, J. D.; Gorton, I.; Meza, J.; Freshley, M.

    2011-12-01

    The Advanced Simulation Capability for Environmental Management (ASCEM) program is developing a modular and extensible open-source set of tools for understanding the fate and transport of contaminants in natural and engineered systems. These tools not only support a fundamental shift toward standardized assessments of performance and risk for the Department of Energy Office of Environmental Management (DOE-EM) cleanup and closure decisions, but establish a modern high-quality code base for a growing interdisciplinary community. Specifically, ASCEM is leveraging advances and expertise from applied mathematics, computer and computational sciences, and the geosciences, in this new development. A toolset named Akuna will provide capabilities for data management, visualization, conceptual model development, uncertainty quantification, parameter estimation, risk analysis, and decision support. Akuna will integrate with Amanzi, a flexible high performance computing simulator, which is designed to leverage the growing parallelism in modern systems. This talk will describe the approach that we have taken to develop this new open-source capability, including issues of intellectual property, licensing, the developers tool chain, and the users tool chain. The modular and extensible design will be discussed, highlighting the potential for collaboration and inclusion of recent modeling and algorithmic advances. In addition, it will discuss the advantages and challenges of relying on an open-source model that leverages a wide variety of open-source efforts from other programs. Results from early prototype development will be presented to highlight the potential of these new tools to contaminated subsurface environments, including calculations for variably saturated flow, advection of non-reactive species and the reactive-transport of 17 different chemical species on both structured and unstructured meshes.

  4. Functional Coding Variation in Recombinant Inbred Mouse Lines Reveals Novel Serotonin Transporter-Associated Phenotypes

    SciTech Connect

    Carneiro, Ana; Airey, David; Thompson, Brent; Zhu, C; Rinchik, Eugene M; Lu, Lu; Chesler, Elissa J; Erikson, Keith; Blakely, Randy

    2009-01-01

    The human serotonin (5-hydroxytryptamine, 5-HT) transporter (hSERT, SLC6A4) figures prominently in the etiology or treatment of many prevalent neurobehavioral disorders including anxiety, alcoholism, depression, autism and obsessive-compulsive disorder (OCD). Here we utilize naturally occurring polymorphisms in recombinant inbred (RI) lines to identify novel phenotypes associated with altered SERT function. The widely used mouse strain C57BL/6J, harbors a SERT haplotype defined by two nonsynonymous coding variants (Gly39 and Lys152 (GK)). At these positions, many other mouse lines, including DBA/2J, encode Glu39 and Arg152 (ER haplotype), assignments found also in hSERT. Synaptosomal 5-HT transport studies revealed reduced uptake associated with the GK variant. Heterologous expression studies confirmed a reduced SERT turnover rate for the GK variant. Experimental and in silico approaches using RI lines (C57Bl/6J X DBA/2J=BXD) identifies multiple anatomical, biochemical and behavioral phenotypes specifically impacted by GK/ER variation. Among our findings are multiple traits associated with anxiety and alcohol consumption, as well as of the control of dopamine (DA) signaling. Further bioinformatic analysis of BXD phenotypes, combined with biochemical evaluation of SERT knockout mice, nominates SERT-dependent 5-HT signaling as a major determinant of midbrain iron homeostasis that, in turn, dictates ironregulated DA phenotypes. Our studies provide a novel example of the power of coordinated in vitro, in vivo and in silico approaches using murine RI lines to elucidate and quantify the system-level impact of gene variation.

  5. SIMULATING MAGNETOHYDRODYNAMICAL FLOW WITH CONSTRAINED TRANSPORT AND ADAPTIVE MESH REFINEMENT: ALGORITHMS AND TESTS OF THE AstroBEAR CODE

    SciTech Connect

    Cunningham, Andrew J.; Frank, Adam; Varniere, Peggy; Mitran, Sorin; Jones, Thomas W.

    2009-06-15

    A description is given of the algorithms implemented in the AstroBEAR adaptive mesh-refinement code for ideal magnetohydrodynamics. The code provides several high-resolution shock-capturing schemes which are constructed to maintain conserved quantities of the flow in a finite-volume sense. Divergence-free magnetic field topologies are maintained to machine precision by collating the components of the magnetic field on a cell-interface staggered grid and utilizing the constrained transport approach for integrating the induction equations. The maintenance of magnetic field topologies on adaptive grids is achieved using prolongation and restriction operators which preserve the divergence and curl of the magnetic field across collocated grids of different resolutions. The robustness and correctness of the code is demonstrated by comparing the numerical solution of various tests with analytical solutions or previously published numerical solutions obtained by other codes.

  6. Code System for Monte Carlo Simulation of Electron and Photon Transport.

    2015-07-01

    Version 01 PENELOPE performs Monte Carlo simulation of coupled electron-photon transport in arbitrary materials and complex quadric geometries. A mixed procedure is used for the simulation of electron and positron interactions (elastic scattering, inelastic scattering and bremsstrahlung emission), in which ‘hard’ events (i.e. those with deflection angle and/or energy loss larger than pre-selected cutoffs) are simulated in a detailed way, while ‘soft’ interactions are calculated from multiple scattering approaches. Photon interactions (Rayleigh scattering, Compton scattering,more » photoelectric effect and electron-positron pair production) and positron annihilation are simulated in a detailed way. PENELOPE reads the required physical information about each material (which includes tables of physical properties, interaction cross sections, relaxation data, etc.) from the input material data file. The material data file is created by means of the auxiliary program MATERIAL, which extracts atomic interaction data from the database of ASCII files. PENELOPE mailing list archives and additional information about the code can be found at http://www.nea.fr/lists/penelope.html. See Abstract for additional features.« less

  7. Code System for Monte Carlo Simulation of Electron and Photon Transport.

    SciTech Connect

    2015-07-01

    Version 01 PENELOPE performs Monte Carlo simulation of coupled electron-photon transport in arbitrary materials and complex quadric geometries. A mixed procedure is used for the simulation of electron and positron interactions (elastic scattering, inelastic scattering and bremsstrahlung emission), in which ‘hard’ events (i.e. those with deflection angle and/or energy loss larger than pre-selected cutoffs) are simulated in a detailed way, while ‘soft’ interactions are calculated from multiple scattering approaches. Photon interactions (Rayleigh scattering, Compton scattering, photoelectric effect and electron-positron pair production) and positron annihilation are simulated in a detailed way. PENELOPE reads the required physical information about each material (which includes tables of physical properties, interaction cross sections, relaxation data, etc.) from the input material data file. The material data file is created by means of the auxiliary program MATERIAL, which extracts atomic interaction data from the database of ASCII files. PENELOPE mailing list archives and additional information about the code can be found at http://www.nea.fr/lists/penelope.html. See Abstract for additional features.

  8. Development of one-dimensional computational fluid dynamics code 'GFLOW' for groundwater flow and contaminant transport analysis

    SciTech Connect

    Rahatgaonkar, P. S.; Datta, D.; Malhotra, P. K.; Ghadge, S. G.

    2012-07-01

    Prediction of groundwater movement and contaminant transport in soil is an important problem in many branches of science and engineering. This includes groundwater hydrology, environmental engineering, soil science, agricultural engineering and also nuclear engineering. Specifically, in nuclear engineering it is applicable in the design of spent fuel storage pools and waste management sites in the nuclear power plants. Ground water modeling involves the simulation of flow and contaminant transport by groundwater flow. In the context of contaminated soil and groundwater system, numerical simulations are typically used to demonstrate compliance with regulatory standard. A one-dimensional Computational Fluid Dynamics code GFLOW had been developed based on the Finite Difference Method for simulating groundwater flow and contaminant transport through saturated and unsaturated soil. The code is validated with the analytical model and the benchmarking cases available in the literature. (authors)

  9. Defragged Binary I Ching Genetic Code Chromosomes Compared to Nirenberg’s and Transformed into Rotating 2D Circles and Squares and into a 3D 100% Symmetrical Tetrahedron Coupled to a Functional One to Discern Start From Non-Start Methionines through a Stella Octangula

    PubMed Central

    Castro-Chavez, Fernando

    2012-01-01

    Background Three binary representations of the genetic code according to the ancient I Ching of Fu-Xi will be presented, depending on their defragging capabilities by pairing based on three biochemical properties of the nucleic acids: H-bonds, Purine/Pyrimidine rings, and the Keto-enol/Amino-imino tautomerism, yielding the last pair a 32/32 single-strand self-annealed genetic code and I Ching tables. Methods Our working tool is the ancient binary I Ching's resulting genetic code chromosomes defragged by vertical and by horizontal pairing, reverse engineered into non-binaries of 2D rotating 4×4×4 circles and 8×8 squares and into one 3D 100% symmetrical 16×4 tetrahedron coupled to a functional tetrahedron with apical signaling and central hydrophobicity (codon formula: 4[1(1)+1(3)+1(4)+4(2)]; 5:5, 6:6 in man) forming a stella octangula, and compared to Nirenberg's 16×4 codon table (1965) pairing the first two nucleotides of the 64 codons in axis y. Results One horizontal and one vertical defragging had the start Met at the center. Two, both horizontal and vertical pairings produced two pairs of 2×8×4 genetic code chromosomes naturally arranged (M and I), rearranged by semi-introversion of central purines or pyrimidines (M' and I') and by clustering hydrophobic amino acids; their quasi-identity was disrupted by amino acids with odd codons (Met and Tyr pairing to Ile and TGA Stop); in all instances, the 64-grid 90° rotational ability was restored. Conclusions We defragged three I Ching representations of the genetic code while emphasizing Nirenberg's historical finding. The synthetic genetic code chromosomes obtained reflect the protective strategy of enzymes with a similar function, having both humans and mammals a biased G-C dominance of three H-bonds in the third nucleotide of their most used codons per amino acid, as seen in one chromosome of the i, M and M' genetic codes, while a two H-bond A-T dominance was found in their complementary chromosome, as seen

  10. Adaptive entropy coded subband coding of images.

    PubMed

    Kim, Y H; Modestino, J W

    1992-01-01

    The authors describe a design approach, called 2-D entropy-constrained subband coding (ECSBC), based upon recently developed 2-D entropy-constrained vector quantization (ECVQ) schemes. The output indexes of the embedded quantizers are further compressed by use of noiseless entropy coding schemes, such as Huffman or arithmetic codes, resulting in variable-rate outputs. Depending upon the specific configurations of the ECVQ and the ECPVQ over the subbands, many different types of SBC schemes can be derived within the generic 2-D ECSBC framework. Among these, the authors concentrate on three representative types of 2-D ECSBC schemes and provide relative performance evaluations. They also describe an adaptive buffer instrumented version of 2-D ECSBC, called 2-D ECSBC/AEC, for use with fixed-rate channels which completely eliminates buffer overflow/underflow problems. This adaptive scheme achieves performance quite close to the corresponding ideal 2-D ECSBC system. PMID:18296138

  11. Developing Sediment Transport and Dredging Prediction Model of Ohio River at Olmsted Locks and Dams Area using HEC-RAS (1D/2D)By Ganesh Raj Ghimire1 and Bruce A. Devantier 2

    NASA Astrophysics Data System (ADS)

    Ghimire, G. R.

    2015-12-01

    Sediment deposition is a serious issue in the construction and operation of large reservoir and inland navigation projects in the United States and around the world. Olmsted Locks and Dams in the Ohio River navigation system is facing similar challenges of huge sediment deposition during the ongoing in-wet construction methodology since 1993. HEC-RAS 5.0 integrated with ArcGIS, will be used to yield unsteady 2D hydrodynamic model of Ohio River at Olmsted area. Velocity, suspended sediment, bed sediment and hydrographic survey data acquired from public archives of USGS and USACE Louisville District will be input into the model. Calibration and validation of model will be performed against the measured stage, flow and velocity data. It will be subjected to completely unsteady 1D sediment transport modeling new to HEC-RAS 5.0 which incorporates sediment load and bed gradation via a DSS file, commercial dredging and BSTEM model. Sediment model will be calibrated to replicate the historical bed volume changes. Excavated cross-sections at Olmsted area will also be used to predict the sediment volume trapped inside the ditch over the period between excavations and placement of dam shells at site. Model will attempt to replicate historical dredging volume data and compare with the deposition volume from simulation model to formulate the dredging prediction model. Hence, the results of this research will generate a model that can form a basis for scheduling the dredging event prior to the placement of off-shore cast shells replacing the current as and when required approach of dredging plan. 1 Graduate Student, Department of Civil Engineering, Southern Illinois University Carbondale Carbondale, Illinois, 62901-6603 2 Professor, Department of Civil Engineering, Southern Illinois University Carbondale Carbondale, Illinois, 62901-6603

  12. WFR-2D: an analytical model for PWAS-generated 2D ultrasonic guided wave propagation

    NASA Astrophysics Data System (ADS)

    Shen, Yanfeng; Giurgiutiu, Victor

    2014-03-01

    This paper presents WaveFormRevealer 2-D (WFR-2D), an analytical predictive tool for the simulation of 2-D ultrasonic guided wave propagation and interaction with damage. The design of structural health monitoring (SHM) systems and self-aware smart structures requires the exploration of a wide range of parameters to achieve best detection and quantification of certain types of damage. Such need for parameter exploration on sensor dimension, location, guided wave characteristics (mode type, frequency, wavelength, etc.) can be best satisfied with analytical models which are fast and efficient. The analytical model was constructed based on the exact 2-D Lamb wave solution using Bessel and Hankel functions. Damage effects were inserted in the model by considering the damage as a secondary wave source with complex-valued directivity scattering coefficients containing both amplitude and phase information from wave-damage interaction. The analytical procedure was coded with MATLAB, and a predictive simulation tool called WaveFormRevealer 2-D was developed. The wave-damage interaction coefficients (WDICs) were extracted from harmonic analysis of local finite element model (FEM) with artificial non-reflective boundaries (NRB). The WFR-2D analytical simulation results were compared and verified with full scale multiphysics finite element models and experiments with scanning laser vibrometer. First, Lamb wave propagation in a pristine aluminum plate was simulated with WFR-2D, compared with finite element results, and verified by experiments. Then, an inhomogeneity was machined into the plate to represent damage. Analytical modeling was carried out, and verified by finite element simulation and experiments. This paper finishes with conclusions and suggestions for future work.

  13. Update On the Status of the FLUKA Monte Carlo Transport Code*

    NASA Technical Reports Server (NTRS)

    Ferrari, A.; Lorenzo-Sentis, M.; Roesler, S.; Smirnov, G.; Sommerer, F.; Theis, C.; Vlachoudis, V.; Carboni, M.; Mostacci, A.; Pelliccioni, M.

    2006-01-01

    The FLUKA Monte Carlo transport code is a well-known simulation tool in High Energy Physics. FLUKA is a dynamic tool in the sense that it is being continually updated and improved by the authors. We review the progress achieved since the last CHEP Conference on the physics models, some technical improvements to the code and some recent applications. From the point of view of the physics, improvements have been made with the extension of PEANUT to higher energies for p, n, pi, pbar/nbar and for nbars down to the lowest energies, the addition of the online capability to evolve radioactive products and get subsequent dose rates, upgrading of the treatment of EM interactions with the elimination of the need to separately prepare preprocessed files. A new coherent photon scattering model, an updated treatment of the photo-electric effect, an improved pair production model, new photon cross sections from the LLNL Cullen database have been implemented. In the field of nucleus-- nucleus interactions the electromagnetic dissociation of heavy ions has been added along with the extension of the interaction models for some nuclide pairs to energies below 100 MeV/A using the BME approach, as well as the development of an improved QMD model for intermediate energies. Both DPMJET 2.53 and 3 remain available along with rQMD 2.4 for heavy ion interactions above 100 MeV/A. Technical improvements include the ability to use parentheses in setting up the combinatorial geometry, the introduction of pre-processor directives in the input stream. a new random number generator with full 64 bit randomness, new routines for mathematical special functions (adapted from SLATEC). Finally, work is progressing on the deployment of a user-friendly GUI input interface as well as a CAD-like geometry creation and visualization tool. On the application front, FLUKA has been used to extensively evaluate the potential space radiation effects on astronauts for future deep space missions, the activation

  14. ANTHEM: a two-dimensional multicomponent self-consistent hydro-electron transport code for laser-matter interaction studies

    SciTech Connect

    Mason, R.J.

    1982-01-01

    The ANTHEM code for the study of CO/sub 2/-laser-generated transport is outlined. ANTHEM treats the background plasma as coupled Eulerian thermal and ion fluids, and the suprathermal electrons as either a third fluid or a body of evolving collisional PIC particles. The electrons scatter off the ions; the suprathermals drag against the thermal background. Self-consistent E- and B-fields are computed by the Implicit Moment Method. The current status of the code is described. Typical output from ANTHEM is discussed with special application to Augmented-Return-Current CO/sub 2/-laser-driven targets.

  15. Suite of Benchmark Tests to Conduct Mesh-Convergence Analysis of Nonlinear and Non-constant Coefficient Transport Codes

    NASA Astrophysics Data System (ADS)

    Zamani, K.; Bombardelli, F. A.

    2014-12-01

    Verification of geophysics codes is imperative to avoid serious academic as well as practical consequences. In case that access to any given source code is not possible, the Method of Manufactured Solution (MMS) cannot be employed in code verification. In contrast, employing the Method of Exact Solution (MES) has several practical advantages. In this research, we first provide four new one-dimensional analytical solutions designed for code verification; these solutions are able to uncover the particular imperfections of the Advection-diffusion-reaction equation, such as nonlinear advection, diffusion or source terms, as well as non-constant coefficient equations. After that, we provide a solution of Burgers' equation in a novel setup. Proposed solutions satisfy the continuity of mass for the ambient flow, which is a crucial factor for coupled hydrodynamics-transport solvers. Then, we use the derived analytical solutions for code verification. To clarify gray-literature issues in the verification of transport codes, we designed a comprehensive test suite to uncover any imperfection in transport solvers via a hierarchical increase in the level of tests' complexity. The test suite includes hundreds of unit tests and system tests to check vis-a-vis the portions of the code. Examples for checking the suite start by testing a simple case of unidirectional advection; then, bidirectional advection and tidal flow and build up to nonlinear cases. We design tests to check nonlinearity in velocity, dispersivity and reactions. The concealing effect of scales (Peclet and Damkohler numbers) on the mesh-convergence study and appropriate remedies are also discussed. For the cases in which the appropriate benchmarks for mesh convergence study are not available, we utilize symmetry. Auxiliary subroutines for automation of the test suite and report generation are designed. All in all, the test package is not only a robust tool for code verification but it also provides comprehensive

  16. COBRA-SFS: A thermal-hydraulic analysis code for spent fuel storage and transportation casks

    SciTech Connect

    Michener, T.E.; Rector, D.R.; Cuta, J.M.; Dodge, R.E.; Enderlin, C.W.

    1995-09-01

    COBRA-SFS is a general thermal-hydraulic analysis computer code for prediction of material temperatures and fluid conditions in a wide variety of systems. The code has been validated for analysis of spent fuel storage systems, as part of the Commercial Spent Fuel Management Program of the US Department of Energy. The code solves finite volume equations representing the conservation equations for mass, moment, and energy for an incompressible single-phase heat transfer fluid. The fluid solution is coupled to a finite volume solution of the conduction equation in the solid structure of the system. This document presents a complete description of Cycle 2 of COBRA-SFS, and consists of three main parts. Part 1 describes the conservation equations, constitutive models, and solution methods used in the code. Part 2 presents the User Manual, with guidance on code applications, and complete input instructions. This part also includes a detailed description of the auxiliary code RADGEN, used to generate grey body view factors required as input for radiative heat transfer modeling in the code. Part 3 describes the code structure, platform dependent coding, and program hierarchy. Installation instructions are also given for the various platform versions of the code that are available.

  17. Update on the Status of the FLUKA Monte Carlo Transport Code

    NASA Technical Reports Server (NTRS)

    Pinsky, L.; Anderson, V.; Empl, A.; Lee, K.; Smirnov, G.; Zapp, N; Ferrari, A.; Tsoulou, K.; Roesler, S.; Vlachoudis, V.; Battisoni, G.; Ceruti, F.; Gadioli, M. V.; Garzelli, M.; Muraro, S.; Rancati, T.; Sala, P.; Ballarini, R.; Ottolenghi, A.; Parini, V.; Scannicchio, D.; Pelliccioni, M.; Wilson, T. L.

    2004-01-01

    The FLUKA Monte Carlo transport code is a well-known simulation tool in High Energy Physics. FLUKA is a dynamic tool in the sense that it is being continually updated and improved by the authors. Here we review the progresses achieved in the last year on the physics models. From the point of view of hadronic physics, most of the effort is still in the field of nucleus--nucleus interactions. The currently available version of FLUKA already includes the internal capability to simulate inelastic nuclear interactions beginning with lab kinetic energies of 100 MeV/A up the the highest accessible energies by means of the DPMJET-II.5 event generator to handle the interactions for greater than 5 GeV/A and rQMD for energies below that. The new developments concern, at high energy, the embedding of the DPMJET-III generator, which represent a major change with respect to the DPMJET-II structure. This will also allow to achieve a better consistency between the nucleus-nucleus section with the original FLUKA model for hadron-nucleus collisions. Work is also in progress to implement a third event generator model based on the Master Boltzmann Equation approach, in order to extend the energy capability from 100 MeV/A down to the threshold for these reactions. In addition to these extended physics capabilities, structural changes to the programs input and scoring capabilities are continually being upgraded. In particular we want to mention the upgrades in the geometry packages, now capable of reaching higher levels of abstraction. Work is also proceeding to provide direct import into ROOT of the FLUKA output files for analysis and to deploy a user-friendly GUI input interface.

  18. Evaluation of Monte Carlo Electron-Transport Algorithms in the Integrated Tiger Series Codes for Stochastic-Media Simulations

    NASA Astrophysics Data System (ADS)

    Franke, Brian C.; Kensek, Ronald P.; Prinja, Anil K.

    2014-06-01

    Stochastic-media simulations require numerous boundary crossings. We consider two Monte Carlo electron transport approaches and evaluate accuracy with numerous material boundaries. In the condensed-history method, approximations are made based on infinite-medium solutions for multiple scattering over some track length. Typically, further approximations are employed for material-boundary crossings where infinite-medium solutions become invalid. We have previously explored an alternative "condensed transport" formulation, a Generalized Boltzmann-Fokker-Planck GBFP method, which requires no special boundary treatment but instead uses approximations to the electron-scattering cross sections. Some limited capabilities for analog transport and a GBFP method have been implemented in the Integrated Tiger Series (ITS) codes. Improvements have been made to the condensed history algorithm. The performance of the ITS condensed-history and condensed-transport algorithms are assessed for material-boundary crossings. These assessments are made both by introducing artificial material boundaries and by comparison to analog Monte Carlo simulations.

  19. A deterministic computational model for the two dimensional electron and photon transport

    NASA Astrophysics Data System (ADS)

    Badavi, Francis F.; Nealy, John E.

    2014-12-01

    A deterministic (non-statistical) two dimensional (2D) computational model describing the transport of electron and photon typical of space radiation environment in various shield media is described. The 2D formalism is casted into a code which is an extension of a previously developed one dimensional (1D) deterministic electron and photon transport code. The goal of both 1D and 2D codes is to satisfy engineering design applications (i.e. rapid analysis) while maintaining an accurate physics based representation of electron and photon transport in space environment. Both 1D and 2D transport codes have utilized established theoretical representations to describe the relevant collisional and radiative interactions and transport processes. In the 2D version, the shield material specifications are made more general as having the pertinent cross sections. In the 2D model, the specification of the computational field is in terms of a distance of traverse z along an axial direction as well as a variable distribution of deflection (i.e. polar) angles θ where -π/2<θ<π/2, and corresponding symmetry is assumed for the range of azimuth angles (0<φ<2π). In the transport formalism, a combined mean-free-path and average trajectory approach is used. For candidate shielding materials, using the trapped electron radiation environments at low Earth orbit (LEO), geosynchronous orbit (GEO) and Jupiter moon Europa, verification of the 2D formalism vs. 1D and an existing Monte Carlo code are presented.

  20. Spatially Resolved Synthetic Spectra from 2D Simulations of Stainless Steel Wire Array Implosions

    SciTech Connect

    Clark, R. W.; Giuliani, J. L.; Thornhill, J. W.; Chong, Y. K.; Dasgupta, A.; Davis, J.

    2009-01-21

    A 2D radiation MHD model has been developed to investigate stainless steel wire array implosion experiments on the Z and refurbished Z machines. This model incorporates within the Mach2 MHD code a self-consistent calculation of the non-LTE kinetics and ray trace based radiation transport. Such a method is necessary in order to account for opacity effects in conjunction with ionization kinetics of K-shell emitting plasmas. Here the model is used to investigate multi-dimensional effects of stainless steel wire implosions. In particular, we are developing techniques to produce non-LTE, axially and/or radially resolved synthetic spectra based upon snapshots of our 2D simulations. Comparisons between experimental spectra and these synthetic spectra will allow us to better determine the state of the experimental pinches.

  1. Accurate dose assessment system for an exposed person utilising radiation transport calculation codes in emergency response to a radiological accident.

    PubMed

    Takahashi, F; Shigemori, Y; Seki, A

    2009-01-01

    A system has been developed to assess radiation dose distribution inside the body of exposed persons in a radiological accident by utilising radiation transport calculation codes-MCNP and MCNPX. The system consists mainly of two parts, pre-processor and post-processor of the radiation transport calculation. Programs for the pre-processor are used to set up a 'problem-dependent' input file, which defines the accident condition and dosimetric quantities to be estimated. The program developed for the post-processor part can effectively indicate dose information based upon the output file of the code. All of the programs in the dosimetry system can be executed with a generally used personal computer and accurately give the dose profile to an exposed person in a radiological accident without complicated procedures. An experiment using a physical phantom was carried out to verify the availability of the dosimetry system with the developed programs in a gamma ray irradiation field. PMID:19181661

  2. Radiation shielding and transport codes and data libraries for personal computers available from the Radiation Shielding Information Center

    SciTech Connect

    Kirk, B.L. )

    1990-01-01

    In nuclear applications, the conversion of mainframe software to the personal computer (PC) environment has seen an accelerated pace. Credit has to be extended to the software companies that have made the scientific language FORTRAN available on PCs. Not to be neglected are the scientists who dedicate their time in the conversion of codes and are challenged by the limited PC memory and disk space. The Radiation shielding Information Center (RSIC) at Oak Ridge National Laboratory has encouraged these developments, and the shielding community has cooperated by making these new tools available via RSIC. The PC codes in the shielding and radiation transport area are divided into five categories (these categories are not mutually exclusive): (1) gamma-ray scattering; (2) neutron and gamma-ray transport (also coupled); (3) environmental dose; (4) medical applications; and (5) reactor physics. Each category is discussed.

  3. Stacking up 2D materials

    NASA Astrophysics Data System (ADS)

    Mayor, Louise

    2016-05-01

    Graphene might be the most famous example, but there are other 2D materials and compounds too. Louise Mayor explains how these atomically thin sheets can be layered together to create flexible “van der Waals heterostructures”, which could lead to a range of novel applications.

  4. Summary of ground water and surface water flow and contaminant transport computer codes used at the Idaho National Engineering Laboratory (INEL). Version 1.0

    SciTech Connect

    Bandy, P.J.; Hall, L.F.

    1993-03-01

    This report presents information on computer codes for numerical and analytical models that have been used at the Idaho National Engineering Laboratory (INEL) to model ground water and surface water flow and contaminant transport. Organizations conducting modeling at the INEL include: EG&G Idaho, Inc., US Geological Survey, and Westinghouse Idaho Nuclear Company. Information concerning computer codes included in this report are: agency responsible for the modeling effort, name of the computer code, proprietor of the code (copyright holder or original author), validation and verification studies, applications of the model at INEL, the prime user of the model, computer code description, computing environment requirements, and documentation and references for the computer code.

  5. Two-Dimensional x-y and r-z Geometry Multigroup Transport Code System for Large Toroidal Reactors.

    1980-06-16

    Version: 00 Although TRIDENT-CTR is a follow-on code to TRIDENT, it has incorporated several features that make it significantly different. It can handle a wide range of irregular geometric domains in both x-y and r-z geometries. However, it was principally designed to solve shielding and blanket problems for large toroidal reactors. TRIDENT-CTR is a two-dimensional, x-y and r-z geometry, multigroup, neutral particle transport code. The use of triangular finite elements gives it the geometric flexibilitymore » to cope with the nonorthogonal shapes of many toroidal designs. The code is capable of handling a wide variety of problems having irregular domains in both x-y and r-z geometries.« less

  6. Development of a coupled dynamics code with transport theory capability and application to accelerator driven systems transients

    SciTech Connect

    Cahalan, J. E.; Ama, T.; Palmiotti, G.; Taiwo, T. A.; Yang, W. S.

    2000-03-09

    The VARIANT-K and DIF3D-K nodal spatial kinetics computer codes have been coupled to the SAS4A and SASSYS-1 liquid metal reactor accident and systems analysis codes. SAS4A and SASSYS-1 have been extended with the addition of heavy liquid metal (Pb and Pb-Bi) thermophysical properties, heat transfer correlations, and fluid dynamics correlations. The coupling methodology and heavy liquid metal modeling additions are described. The new computer code suite has been applied to analysis of neutron source and thermal-hydraulics transients in a model of an accelerator-driven minor actinide burner design proposed in an OECD/NEA/NSC benchmark specification. Modeling assumptions and input data generation procedures are described. Results of transient analyses are reported, with emphasis on comparison of P1 and P3 variational nodal transport theory results with nodal diffusion theory results, and on significance of spatial kinetics effects.

  7. Parallelization of a multiregion flow and transport code using software emulated global shared memory and high performance FORTRAN

    SciTech Connect

    D`Azevedo, E.F.; Gwo, Jin-Ping

    1997-02-01

    The objectives of this research are (1) to parallelize a suite of multiregion groundwater flow and solute transport codes that use Galerkin and Lagrangian- Eulerian finite element methods, (2) to test the compatibility of a global shared memory emulation software with a High Performance FORTRAN (HPF) compiler, and (3) to obtain performance characteristics and scalability of the parallel codes. The suite of multiregion flow and transport codes, 3DMURF and 3DMURT, were parallelized using the DOLIB shared memory emulation, in conjunction with the PGI HPF compiler, to run on the Intel Paragons at the Oak Ridge National Laboratory (ORNL) and a network of workstations. The novelty of this effort is first in the use of HPF and global shared memory emulation concurrently to facilitate the conversion of a serial code to a parallel code, and secondly the shared memory library enables efficient implementation of Lagrangian particle tracking along flow characteristics. The latter allows long-time-step-size simulation with particle tracking and dynamic particle redistribution for load balancing, thereby reducing the number of time steps needed for most transient problems. The parallel codes were applied to a pumping well problem to test the efficiency of the domain decomposition and particle tracking algorithms. The full problem domain consists of over 200,000 degrees of freedom with highly nonlinear soil property functions. Relatively good scalability was obtained for a preliminary test run on the Intel Paragons at the Center for Computational Sciences (CCS), ORNL. However, due to the difficulties we encountered in the PGI HPF compiler, as of the writing of this manuscript we are able to report results from 3DMURF only.

  8. EM 2dV1.0.F

    2012-01-05

    Code is for a layered electric medium with 2d structure. Includes air-earth interface at node z=2.. The electric ex and ez fields are calculated on edges of elemental grid and magnetic field hy is calculated on the face of the elemental grid. The code allows for a layered earth with 2d structures. Solutions of coupled first order Maxwell's equations are solved in the two dimensional environment using a finite- difference scheme on a staggered spationamore » and temporal grid.« less

  9. Application of 3-dimensional radiation transport codes to the analysis of the CRBR prototypic coolant pipe chaseway neutron streaming experiment

    SciTech Connect

    Chatani, K. )

    1992-08-01

    This report summarizes the calculational results from analyses of a Clinch River Breeder Reactor (CRBR) prototypic coolant pipe chaseway neutron streaming experiment Comparisons of calculated and measured results are presented, major emphasis being placed on results at bends in the chaseway. Calculations were performed with three three-dimensional radiation transport codes: the discrete ordinates code TORT and the Monte Carlo code MORSE, both developed by the Oak Ridge National Laboratory (ORNL), and the discrete ordinates code ENSEMBLE, developed by Japan. The calculated results from the three codes are compared (1) with previously-calculated DOT3.5 two-dimensional results, (2) among themselves, and (3) with measured results. Calculations with TORT used both the weighted-difference and nodal methods. Only the weighted-difference method was used in ENSEMBLE. When the calculated results were compared to measured results, it was found that calculation-to-experiment (C/E) ratios were good in the regions of the chaseway where two-dimensional modeling might be difficult and where there were no significant discrete ordinates ray effects. Excellent agreement was observed for responses dominated by thermal neutron contributions. MORSE-calculated results and comparisons are described also, and detailed results are presented in an appendix.

  10. MOSS2D V1

    2001-01-31

    This software reduces the data from two-dimensional kSA MOS program, k-Space Associates, Ann Arbor, MI. Initial MOS data is recorded without headers in 38 columns, with one row of data per acquisition per lase beam tracked. The final MOSS 2d data file is reduced, graphed, and saved in a tab-delimited column format with headers that can be plotted in any graphing software.

  11. Multi-fluid code simulations including anomalous non-diffusive transport of plasma and impurities in the tokamak SOL

    SciTech Connect

    Pigarov, A Y; West, W; Soukhanovskii, V; Rognlien, T; Maingi, R; Lipschultz, B; Krasheninnikov, S; LaBombard, B

    2003-11-25

    Fast intermittent transport has been observed in the scrape-off layer (SOL) of major tokamaks including Alcator C-Mod, DIII-D, and NSTX. This kind of transport is not diffusive but rather convective. It strongly increases plasma flux to the chamber walls and enhances the recycling of neutral particles in the main chamber. We discuss anomalous cross-field convection (ACFC) model for impurity and main plasma ions and its relation to intermittent transport events, i.e. plasma density blobs and holes in the SOL. Along with plasma diffusivity coefficients, our transport model introduces time-independent anomalous cross-field convective velocity. In the discharge modelling, diffusivity coefficients and ACFC velocity profiles are adjusted to match a set of representative experimental data. We use this model in the edge plasma physics code UEDGE to simulate the multi-fluid two-dimensional transport for these three tokamaks. We present simulation results suggesting the dominance of anomalous convection in the far SOL transport. These results are consistent with the hypothesis that the chamber wall is an important source of impurities and that different impurity charge states have different directions of anomalous convective velocity.

  12. Monte Carlo Code System for High-Energy Radiation Transport Calculations.

    2000-02-16

    Version 00 HERMES-KFA consists of a set of Monte Carlo Codes used to simulate particle radiation and interaction with matter. The main codes are HETC, MORSE, and EGS. They are supported by a common geometry package, common random routines, a command interpreter, and auxiliary codes like NDEM that is used to generate a gamma-ray source from nuclear de-excitation after spallation processes. The codes have been modified so that any particle history falling outside the domainmore » of the physical theory of one program can be submitted to another program in the suite to complete the work. Also response data can be submitted by each program, to be collected and combined by a statistic package included within the command interpreter.« less

  13. Nanoimprint lithography: 2D or not 2D? A review

    NASA Astrophysics Data System (ADS)

    Schift, Helmut

    2015-11-01

    Nanoimprint lithography (NIL) is more than a planar high-end technology for the patterning of wafer-like substrates. It is essentially a 3D process, because it replicates various stamp topographies by 3D displacement of material and takes advantage of the bending of stamps while the mold cavities are filled. But at the same time, it keeps all assets of a 2D technique being able to pattern thin masking layers like in photon- and electron-based traditional lithography. This review reports about 20 years of development of replication techniques at Paul Scherrer Institut, with a focus on 3D aspects of molding, which enable NIL to stay 2D, but at the same time enable 3D applications which are "more than Moore." As an example, the manufacturing of a demonstrator for backlighting applications based on thermally activated selective topography equilibration will be presented. This technique allows generating almost arbitrary sloped, convex and concave profiles in the same polymer film with dimensions in micro- and nanometer scale.

  14. Numerical Simulations of High-Frequency Respiratory Flows in 2D and 3D Lung Bifurcation Models

    NASA Astrophysics Data System (ADS)

    Chen, Zixi; Parameswaran, Shamini; Hu, Yingying; He, Zhaoming; Raj, Rishi; Parameswaran, Siva

    2014-07-01

    To better understand the human pulmonary system and optimize the high-frequency oscillatory ventilation (HFOV) design, numerical simulations were conducted under normal breathing frequency and HFOV condition using a CFD code Ansys Fluent and its user-defined C programs. 2D and 3D double bifurcating lung models were created, and the geometry corresponds to fifth to seventh generations of airways with the dimensions based on the Weibel's pulmonary model. Computations were carried out for different Reynolds numbers (Re = 400 and 1000) and Womersley numbers (α = 4 and 16) to study the air flow fields, gas transportation, and wall shear stresses in the lung airways. Flow structure was compared with experimental results. Both 2D and 3D numerical models successfully reproduced many results observed in the experiment. The oxygen concentration distribution in the lung model was investigated to analyze the influence of flow oscillation on gas transport inside the lung model.

  15. Simulation of chaotic electrokinetic transport: performance of commercial software versus custom-built direct numerical simulation codes.

    PubMed

    Karatay, Elif; Druzgalski, Clara L; Mani, Ali

    2015-05-15

    Many microfluidic and electrochemical applications involve chaotic transport phenomena that arise due to instabilities stemming from coupling of hydrodynamics with ion transport and electrostatic forces. Recent investigations have revealed the contribution of a wide range of spatio-temporal scales in such electro-chaotic systems similar to those observed in turbulent flows. Given that these scales can span several orders of magnitude, significant numerical resolution is needed for accurate prediction of these phenomena. The objective of this work is to assess accuracy and efficiency of commercial software for prediction of such phenomena. We have considered the electroconvective flow induced by concentration polarization near an ion selective surface as a model problem representing chaotic elecrokinetic phenomena. We present detailed comparison of the performance of a general-purpose commercial computational fluid dynamics (CFD) and transport solver against a custom-built direct numerical simulation code that has been tailored to the specific physics of unsteady electrokinetic flows. We present detailed statistics including velocity and ion concentration spectra over a wide range of frequencies as well as time-averaged statistics and computational time required for each simulation. Our results indicate that while accuracy can be guaranteed with proper mesh resolution and avoiding numerical dissipation, commercial solvers are generally at least an order of magnitude slower than custom-built direct numerical simulation codes. PMID:25660706

  16. Reactor Dosimetry Applications Using RAPTOR-M3G:. a New Parallel 3-D Radiation Transport Code

    NASA Astrophysics Data System (ADS)

    Longoni, Gianluca; Anderson, Stanwood L.

    2009-08-01

    The numerical solution of the Linearized Boltzmann Equation (LBE) via the Discrete Ordinates method (SN) requires extensive computational resources for large 3-D neutron and gamma transport applications due to the concurrent discretization of the angular, spatial, and energy domains. This paper will discuss the development RAPTOR-M3G (RApid Parallel Transport Of Radiation - Multiple 3D Geometries), a new 3-D parallel radiation transport code, and its application to the calculation of ex-vessel neutron dosimetry responses in the cavity of a commercial 2-loop Pressurized Water Reactor (PWR). RAPTOR-M3G is based domain decomposition algorithms, where the spatial and angular domains are allocated and processed on multi-processor computer architectures. As compared to traditional single-processor applications, this approach reduces the computational load as well as the memory requirement per processor, yielding an efficient solution methodology for large 3-D problems. Measured neutron dosimetry responses in the reactor cavity air gap will be compared to the RAPTOR-M3G predictions. This paper is organized as follows: Section 1 discusses the RAPTOR-M3G methodology; Section 2 describes the 2-loop PWR model and the numerical results obtained. Section 3 addresses the parallel performance of the code, and Section 4 concludes this paper with final remarks and future work.

  17. RADMC: A 2-D Continuum Radiative Transfer Tool

    NASA Astrophysics Data System (ADS)

    Dullemond, C. P.

    2011-08-01

    RADMC is a 2-D Monte-Carlo code for dust continuum radiative transfer circumstellar disks and envelopes. It is based on the method of Bjorkman & Wood (ApJ 2001, 554, 615), but with several modifications to produce smoother results with fewer photon packages.

  18. Sensitivity of Cosmic-Ray Proton Spectra to the Low-wavenumber Behavior of the 2D Turbulence Power Spectrum

    NASA Astrophysics Data System (ADS)

    Engelbrecht, N. E.; Burger, R. A.

    2015-12-01

    In this study, a novel ab initio cosmic ray (CR) modulation code that solves a set of stochastic transport equations equivalent to the Parker transport equation, and that uses output from a turbulence transport code as input for the diffusion tensor, is introduced. This code is benchmarked with a previous approach to ab initio modulation. The sensitivity of computed galactic CR proton spectra at Earth to assumptions made as to the low-wavenumber behavior of the two-dimensional (2D) turbulence power spectrum is investigated using perpendicular mean free path expressions derived from two different scattering theories. Constraints on the low-wavenumber behavior of the 2D power spectrum are inferred from the qualitative comparison of computed CR spectra with spacecraft observations at Earth. Another key difference from previous studies is that observed and inferred CR intensity spectra at 73 AU are used as boundary spectra instead of the usual local interstellar spectrum. Furthermore, the results presented here provide a tentative explanation as to the reason behind the unusually high galactic proton intensity spectra observed in 2009 during the recent unusual solar minimum.

  19. Verification and Validation: High Charge and Energy (HZE) Transport Codes and Future Development

    NASA Technical Reports Server (NTRS)

    Wilson, John W.; Tripathi, Ram K.; Mertens, Christopher J.; Blattnig, Steve R.; Clowdsley, Martha S.; Cucinotta, Francis A.; Tweed, John; Heinbockel, John H.; Walker, Steven A.; Nealy, John E.

    2005-01-01

    In the present paper, we give the formalism for further developing a fully three-dimensional HZETRN code using marching procedures but also development of a new Green's function code is discussed. The final Green's function code is capable of not only validation in the space environment but also in ground based laboratories with directed beams of ions of specific energy and characterized with detailed diagnostic particle spectrometer devices. Special emphasis is given to verification of the computational procedures and validation of the resultant computational model using laboratory and spaceflight measurements. Due to historical requirements, two parallel development paths for computational model implementation using marching procedures and Green s function techniques are followed. A new version of the HZETRN code capable of simulating HZE ions with either laboratory or space boundary conditions is under development. Validation of computational models at this time is particularly important for President Bush s Initiative to develop infrastructure for human exploration with first target demonstration of the Crew Exploration Vehicle (CEV) in low Earth orbit in 2008.

  20. Computer codes for the evaluation of thermodynamic properties, transport properties, and equilibrium constants of an 11-species air model

    NASA Technical Reports Server (NTRS)

    Thompson, Richard A.; Lee, Kam-Pui; Gupta, Roop N.

    1990-01-01

    The computer codes developed provide data to 30000 K for the thermodynamic and transport properties of individual species and reaction rates for the prominent reactions occurring in an 11-species nonequilibrium air model. These properties and the reaction-rate data are computed through the use of curve-fit relations which are functions of temperature (and number density for the equilibrium constant). The curve fits were made using the most accurate data believed available. A detailed review and discussion of the sources and accuracy of the curve-fitted data used herein are given in NASA RP 1232.

  1. 2012 Annual Report: Simulate and Evaluate the Cesium Transport and Accumulation in Fukushima-Area Rivers by the TODAM Code

    SciTech Connect

    Onishi, Yasuo; Yokuda, Satoru T.

    2013-03-28

    Pacific Northwest National Laboratory initiated the application of the time-varying, one-dimensional sediment-contaminant transport code, TODAM (Time-dependent, One-dimensional, Degradation, And Migration) to simulate the cesium migration and accumulation in the Ukedo River in Fukushima. This report describes the preliminary TODAM simulation results of the Ukedo River model from the location below the Ougaki Dam to the river mouth at the Pacific Ocean. The major findings of the 100-hour TODAM simulation of the preliminary Ukedo River modeling are summarized as follows:

  2. TRHD: Three-temperature radiation-hydrodynamics code with an implicit non-equilibrium radiation transport using a cell-centered monotonic finite volume scheme on unstructured-grids

    NASA Astrophysics Data System (ADS)

    Sijoy, C. D.; Chaturvedi, S.

    2015-05-01

    Three-temperature (3T), unstructured-mesh, non-equilibrium radiation hydrodynamics (RHD) code have been developed for the simulation of intense thermal radiation or high-power laser driven radiative shock hydrodynamics in two-dimensional (2D) axis-symmetric geometries. The governing hydrodynamics equations are solved using a compatible unstructured Lagrangian method based on a control volume differencing (CVD) scheme. A second-order predictor-corrector (PC) integration scheme is used for the temporal discretization of the hydrodynamics equations. For the radiation energy transport, frequency averaged gray model is used in which the flux-limited diffusion (FLD) approximation is used to recover the free-streaming limit of the radiation propagation in optically thin regions. The proposed RHD model allows to have different temperatures for the electrons and ions. In addition to this, the electron and thermal radiation temperatures are assumed to be in non-equilibrium. Therefore, the thermal relaxation between the electrons and ions and the coupling between the radiation and matter energies are required to be computed self-consistently. For this, the coupled flux limited electron heat conduction and the non-equilibrium radiation diffusion equations are solved simultaneously by using an implicit, axis-symmetric, cell-centered, monotonic, nonlinear finite volume (NLFV) scheme. In this paper, we have described the details of the 2D, 3T, non-equilibrium RHD code developed along with a suite of validation test problems to demonstrate the accuracy and performance of the algorithms. We have also conducted a performance analysis with different linearity preserving interpolation schemes that are used for the evaluation of the nodal values in the NLFV scheme. Finally, in order to demonstrate full capability of the code implementation, we have presented the simulation of laser driven thin Aluminum (Al) foil acceleration. The simulation results are found to be in good agreement

  3. A Monte Carlo neutron transport code for eigenvalue calculations on a dual-GPU system and CUDA environment

    SciTech Connect

    Liu, T.; Ding, A.; Ji, W.; Xu, X. G.; Carothers, C. D.; Brown, F. B.

    2012-07-01

    Monte Carlo (MC) method is able to accurately calculate eigenvalues in reactor analysis. Its lengthy computation time can be reduced by general-purpose computing on Graphics Processing Units (GPU), one of the latest parallel computing techniques under development. The method of porting a regular transport code to GPU is usually very straightforward due to the 'embarrassingly parallel' nature of MC code. However, the situation becomes different for eigenvalue calculation in that it will be performed on a generation-by-generation basis and the thread coordination should be explicitly taken care of. This paper presents our effort to develop such a GPU-based MC code in Compute Unified Device Architecture (CUDA) environment. The code is able to perform eigenvalue calculation under simple geometries on a multi-GPU system. The specifics of algorithm design, including thread organization and memory management were described in detail. The original CPU version of the code was tested on an Intel Xeon X5660 2.8 GHz CPU, and the adapted GPU version was tested on NVIDIA Tesla M2090 GPUs. Double-precision floating point format was used throughout the calculation. The result showed that a speedup of 7.0 and 33.3 were obtained for a bare spherical core and a binary slab system respectively. The speedup factor was further increased by a factor of {approx}2 on a dual GPU system. The upper limit of device-level parallelism was analyzed, and a possible method to enhance the thread-level parallelism was proposed. (authors)

  4. Photocurrent spectroscopy of 2D materials

    NASA Astrophysics Data System (ADS)

    Cobden, David

    Confocal photocurrent measurements provide a powerful means of studying many aspects of the optoelectronic and electrical properties of a 2D device or material. At a diffraction-limited point they can provide a detailed absorption spectrum, and they can probe local symmetry, ultrafast relaxation rates and processes, electron-electron interaction strengths, and transport coefficients. We illustrate this with several examples, once being the photo-Nernst effect. In gapless 2D materials, such as graphene, in a perpendicular magnetic field a photocurrent antisymmetric in the field is generated near to the free edges, with opposite sign at opposite edges. Its origin is the transverse thermoelectric current associated with the laser-induced electron temperature gradient. This effect provides an unambiguous demonstration of the Shockley-Ramo nature of long-range photocurrent generation in gapless materials. It also provides a means of investigating quasiparticle properties. For example, in the case of graphene on hBN, it can be used to probe the Lifshitz transition that occurs due to the minibands formed by the Moire superlattice. We also observe and discuss photocurrent generated in other semimetallic (WTe2) and semiconducting (WSe2) monolayers. Work supported by DoE BES and NSF EFRI grants.

  5. Cosmic ray transport in heliospheric magnetic structures. I. Modeling background solar wind using the CRONOS magnetohydrodynamic code

    SciTech Connect

    Wiengarten, T.; Kleimann, J.; Fichtner, H.; Kühl, P.; Kopp, A.; Heber, B.; Kissmann, R.

    2014-06-10

    The transport of energetic particles such as cosmic rays is governed by the properties of the plasma being traversed. While these properties are rather poorly known for galactic and interstellar plasmas due to the lack of in situ measurements, the heliospheric plasma environment has been probed by spacecraft for decades and provides a unique opportunity for testing transport theories. Of particular interest for the three-dimensional (3D) heliospheric transport of energetic particles are structures such as corotating interaction regions, which, due to strongly enhanced magnetic field strengths, turbulence, and associated shocks, can act as diffusion barriers on the one hand, but also as accelerators of low energy CRs on the other hand as well. In a two-fold series of papers, we investigate these effects by modeling inner-heliospheric solar wind conditions with a numerical magnetohydrodynamic (MHD) setup (this paper), which will serve as an input to a transport code employing a stochastic differential equation approach (second paper). In this first paper, we present results from 3D MHD simulations with our code CRONOS: for validation purposes we use analytic boundary conditions and compare with similar work by Pizzo. For a more realistic modeling of solar wind conditions, boundary conditions derived from synoptic magnetograms via the Wang-Sheeley-Arge (WSA) model are utilized, where the potential field modeling is performed with a finite-difference approach in contrast to the traditional spherical harmonics expansion often utilized in the WSA model. Our results are validated by comparing with multi-spacecraft data for ecliptical (STEREO-A/B) and out-of-ecliptic (Ulysses) regions.

  6. FPCAS2D user's guide, version 1.0

    NASA Astrophysics Data System (ADS)

    Bakhle, Milind A.

    1994-12-01

    The FPCAS2D computer code has been developed for aeroelastic stability analysis of bladed disks such as those in fans, compressors, turbines, propellers, or propfans. The aerodynamic analysis used in this code is based on the unsteady two-dimensional full potential equation which is solved for a cascade of blades. The structural analysis is based on a two degree-of-freedom rigid typical section model for each blade. Detailed explanations of the aerodynamic analysis, the numerical algorithms, and the aeroelastic analysis are not given in this report. This guide can be used to assist in the preparation of the input data required by the FPCAS2D code. A complete description of the input data is provided in this report. In addition, four test cases, including inputs and outputs, are provided.

  7. Joint wavelet-based coding and packetization for video transport over packet-switched networks

    NASA Astrophysics Data System (ADS)

    Lee, Hung-ju

    1996-02-01

    In recent years, wavelet theory applied to image, and audio and video compression has been extensively studied. However, only gaining compression ratio without considering the underlying networking systems is unrealistic, especially for multimedia applications over networks. In this paper, we present an integrated approach, which attempts to preserve the advantages of wavelet-based image coding scheme and to provide robustness to a certain extent for lost packets over packet-switched networks. Two different packetization schemes, called the intrablock-oriented (IAB) and interblock-oriented (IRB) schemes, in conjunction with wavelet-based coding, are presented. Our approach is evaluated under two different packet loss models with various packet loss probabilities through simulations which are driven by real video sequences.

  8. Electron-photon transport using the EGS4 (Electron Gamma Shower) Monte Carlo Code

    SciTech Connect

    Nelson, W.R.; Hirayama, H.; Rogers, D.W.O.

    1986-01-01

    The EGS (Electron Gamma Shower) code system was formally introduced in 1978 as a package, most commonly referred to as ESG3. It was designed to simulate electromagnetic cascades in various geometries and at energies up to a few thousand gigaelectron volts and down to cutoff kinetic energies of 0.1 MeV (photons) and 1 MeV (electrons). There have been many requests to extend EGS3 down to lower energies and this is a major, but not the only, reason for creating EGS4, which is now available for general distribution and is the subject of this presentation. A summary is given of the main features of the ESG4 code system, including statements about the physics that has been put into it and what can be realistically simulated. 6 refs.

  9. Modeling Star-Forming Regions using a 3D Molecular Transport Code

    NASA Astrophysics Data System (ADS)

    Loughnane, R. M.; Redman, M. P.; Keto, E. R.

    2012-07-01

    This paper presents the 3-dimensional non-LTE radiative transfer code, MOLLIE (MOLelcular LIne Explorer), for solving molecular and atomic excitation and radiation transfer in a molecular gas and predicting emergent spectra. The code implementation makes use of the Accelerated Lambda Iteration (ALI) method of Rybicki & Hummer (1991) to solve the radiative transfer equation along rays passing through a spherical model cloud. When convergence between level populations, the radiation field, and the point separation has been obtained, the grid is ray-traced to produce images that can be readily compared to observations. The optimization technique, Fast Simulated Annealing (FSA), adopted by MOLLIE to increase the probability of arriving at a satisfactory output in a timely fashion, is briefly considered.

  10. Final Report for ''Client Server Software for the National Transport Code Collaboration''

    SciTech Connect

    John R Cary; David Alexander; Johan Carlsson; Kelly Luetkemeyer; Nathaniel Sizemore

    2004-04-30

    OAK-B135 Tech-X Corporation designed and developed all the networking code tying together the NTCC data server with the data client and the physics server with the data server and physics client. We were also solely responsible for the data and physics clients and the vast majority of the work on the data server. We also performed a number of other tasks.

  11. 2D modeling of DC potential structures induced by RF sheaths with transverse currents in front of ICRF antenna

    SciTech Connect

    Faudot, E.; Heuraux, S.; Colas, L.

    2005-09-26

    Understanding DC potential generation in front of ICRF antennas is crucial for long pulse high RF power systems. DC potentials are produced by sheath rectification of these RF potentials. To reach this goal, near RF parallel electric fields have to be computed in 3D and integrated along open magnetic field lines to yield a 2D RF potential map in a transverse plane. DC potentials are produced by sheath rectification of these RF potentials. As RF potentials are spatially inhomogeneous, transverse polarization currents are created, modifying RF and DC maps. Such modifications are quantified on a 'test map' having initially a Gaussian shape and assuming that the map remains Gaussian near its summit,the time behavior of the peak can be estimated analytically in presence of polarization current as a function of its width r0 and amplitude {phi}0 (normalized to a characteristic length for transverse transport and to the local temperature). A 'peaking factor' is built from the DC peak potential normalized to {phi}0, and validated with a 2D fluid code and a 2D PIC code (XOOPIC). In an unexpected way transverse currents can increase this factor. Realistic situations of a Tore Supra antenna are also studied, with self-consistent near fields provided by ICANT code. Basic processes will be detailed and an evaluation of the 'peaking factor' for ITER will be presented for a given configuration.

  12. Transport Properties of 2D-Electron Gas in a InGaAs/GaAs DQW in a Vicinity of Low Magnetic-Field-Induced Insulator-Quantum Hall Liquid Transition

    NASA Astrophysics Data System (ADS)

    Arapov, Yu. G.; Yakunin, M. V.; Gudina, S. V.; Harus, G. I.; Neverov, V. N.; Shelushinina, N. G.; Podgornyh, S. M.; Uskova, E. A.; Zvonkov, B. N.

    2007-04-01

    The resistivity ρ of low mobility dilute 2D-elecron gas in a InGaAs/GaAs double quantum well (DQW) exhibits the monotonic "insulating-like" temperature dependence (dρ/dT < 0) at T = 1.8-70K in zero magnetic field. This temperature interval corresponds to a ballistic regime (kBTτ/ℏ > 0.1) for our samples. We observed the coexistence of both the quantum Hall (QH) effect for the filling factors v = 2, 4 and the low magnetic field insulator — QH liquid (with v = 10) transition.

  13. DIVIMP Modeling of Impurity Transport in EAST

    NASA Astrophysics Data System (ADS)

    Wang, Fuqiong; Chen, Yiping; Hu, Liqun

    2014-07-01

    Simulations of carbon impurity transport in SOL/divertor plasmas with Ohmic heating on EAST tokamak were performed using the two-dimensional (2D) Monte Carlo impurity transport code DIVIMP. The background plasmas for DIVIMP simulations were externally taken from B2.5/Eirene calculation. Besides the basic output of DIVIMP, the 2D density distributions of the carbon impurity with different ionization states and neutral carbon atoms were obtained, the 2D distributions of CII and CIII emissivities from C+1 and C+2 radiation respectively were also calculated. Comparison between the measured and calculated CIII emissivities showed favorable agreement, indicating that the impurity physics transport models, as implemented in the DIVIMP code, are suitable for the EAST tokamak plasma condition.

  14. General Purpose Monte Carlo Codes for Neutron and Photon Transport Calculations based on Continuous Energy and Multigroup Methods.

    2008-02-29

    Version 00 (1) Problems to be solved: MVP/GMVP II can solve eigenvalue and fixed-source problems. The multigroup code GMVP can solve forward and adjoint problems for neutron, photon and neutron-photon coupled transport. The continuous-energy code MVP can solve only the forward problems. Both codes can also perform time-dependent calculations. (2) Geometry description: MVP/GMVP employs combinatorial geometry to describe the calculation geometry. It describes spatial regions by the combination of the 3-dimensional objects (BODIes). Currently, themore » following objects (BODIes) can be used. - BODIes with linear surfaces : half space, parallelepiped, right parallelepiped, wedge, right hexagonal prism - BODIes with quadratic surface and linear surfaces : cylinder, sphere, truncated right cone, truncated elliptic cone, ellipsoid by rotation, general ellipsoid - Arbitrary quadratic surface and torus The rectangular and hexagonal lattice geometry can be used to describe the repeated geometry. Furthermore, the statistical geometry model is available to treat coated fuel particles or pebbles for high temperature reactors. (3) Particle sources: The various forms of energy-, angle-, space- and time-dependent distribution functions can be specified. See Abstract for more detail.« less

  15. Ack1 is a dopamine transporter endocytic brake that rescues a trafficking-dysregulated ADHD coding variant

    PubMed Central

    Wu, Sijia; Bellve, Karl D.; Fogarty, Kevin E.; Melikian, Haley E.

    2015-01-01

    The dopamine (DA) transporter (DAT) facilitates high-affinity presynaptic DA reuptake that temporally and spatially constrains DA neurotransmission. Aberrant DAT function is implicated in attention-deficit/hyperactivity disorder and autism spectrum disorder. DAT is a major psychostimulant target, and psychostimulant reward strictly requires binding to DAT. DAT function is acutely modulated by dynamic membrane trafficking at the presynaptic terminal and a PKC-sensitive negative endocytic mechanism, or “endocytic brake,” controls DAT plasma membrane stability. However, the molecular basis for the DAT endocytic brake is unknown, and it is unknown whether this braking mechanism is unique to DAT or common to monoamine transporters. Here, we report that the cdc42-activated, nonreceptor tyrosine kinase, Ack1, is a DAT endocytic brake that stabilizes DAT at the plasma membrane and is released in response to PKC activation. Pharmacologic and shRNA-mediated Ack1 silencing enhanced basal DAT internalization and blocked PKC-stimulated DAT internalization, but had no effects on SERT endocytosis. Both cdc42 activation and PKC stimulation converge on Ack1 to control Ack1 activity and DAT endocytic capacity, and Ack1 inactivation is required for stimulated DAT internalization downstream of PKC activation. Moreover, constitutive Ack1 activation is sufficient to rescue the gain-of-function endocytic phenotype exhibited by the ADHD DAT coding variant, R615C. These findings reveal a unique endocytic control switch that is highly specific for DAT. Moreover, the ability to rescue the DAT(R615C) coding variant suggests that manipulating DAT trafficking mechanisms may be a potential therapeutic approach to correct DAT coding variants that exhibit trafficking dysregulation. PMID:26621748

  16. Multigroup Time-Independent Neutron Transport Code System for Plane or Spherical Geometry.

    1986-12-01

    Version 00 PALLAS-PL/SP solves multigroup time-independent one-dimensional neutron transport problems in plane or spherical geometry. The problems solved are subject to a variety of boundary conditions or a distributed source. General anisotropic scattering problems are treated for solving deep-penetration problems in which angle-dependent neutron spectra are calculated in detail.

  17. An Intercomparison of 2-D Models Within a Common Framework

    NASA Technical Reports Server (NTRS)

    Weisenstein, Debra K.; Ko, Malcolm K. W.; Scott, Courtney J.; Jackman, Charles H.; Fleming, Eric L.; Considine, David B.; Kinnison, Douglas E.; Connell, Peter S.; Rotman, Douglas A.; Bhartia, P. K. (Technical Monitor)

    2002-01-01

    A model intercomparison among the Atmospheric and Environmental Research (AER) 2-D model, the Goddard Space Flight Center (GSFC) 2-D model, and the Lawrence Livermore National Laboratory 2-D model allows us to separate differences due to model transport from those due to the model's chemical formulation. This is accomplished by constructing two hybrid models incorporating the transport parameters of the GSFC and LLNL models within the AER model framework. By comparing the results from the native models (AER and e.g. GSFC) with those from the hybrid model (e.g. AER chemistry with GSFC transport), differences due to chemistry and transport can be identified. For the analysis, we examined an inert tracer whose emission pattern is based on emission from a High Speed Civil Transport (HSCT) fleet; distributions of trace species in the 2015 atmosphere; and the response of stratospheric ozone to an HSCT fleet. Differences in NO(y) in the upper stratosphere are found between models with identical transport, implying different model representations of atmospheric chemical processes. The response of O3 concentration to HSCT aircraft emissions differs in the models from both transport-dominated differences in the HSCT-induced perturbations of H2O and NO(y) as well as from differences in the model represent at ions of O3 chemical processes. The model formulations of cold polar processes are found to be the most significant factor in creating large differences in the calculated ozone perturbations

  18. Performance of RELAP/SCDAPSIM Code on Fission Products Transport Prediction

    SciTech Connect

    Honaiser, Eduardo

    2006-07-01

    Fission product transport in the piping system of primary circuits is an important area of study in field of the severe accidents. Fission product transport comprises all phenomenon occurring from the nuclear core to the containment release site. Once released in the flow channels, fission products can condense on the piping walls, nucleate aerosols, which can agglomerate and/or deposit on the piping walls. The phenomenology occurs in a steam-hydrogen convective environment. A model (FPTRAN) was developed for the program RELAP/SCDAPSIM that calculates all phenomenon related to the fission product transport through the piping system. The model solves a set of differential equations. The coefficients in these equations represent the processes at which several states change among them. The processes considered were vapor adsorption and condensation on the piping walls, aerosol formation and growth (condensation and agglomeration), and aerosol deposition. The model also controls the aerosol particle size distribution. The PHEBUS experiments compose the most complete experimental program ever conducted for the understanding of fission product behavior in Reactor Cooling System and containment. It employs a reactor to generate fission products, which are transported through a scaled piping system simulating the primary circuit of a pressurized water reactor (PWR). Along the piping system, several instruments are installed to measure the amount of fission products deposited and their states. This paper describes the modeling of the experiment Phebus FPT-01 using RELAP/SCDAPSIM and compares simulation and experimental results to assess the performance of the FPTRAN module on the fission products transport prediction. These results can be considered satisfactory, except for iodine. This inconsistency of iodine is probably due to an incorrect chemical form assumed for iodine. (author)

  19. Experimental validation of equations for 2D DIC uncertainty quantification.

    SciTech Connect

    Reu, Phillip L.; Miller, Timothy J.

    2010-03-01

    Uncertainty quantification (UQ) equations have been derived for predicting matching uncertainty in two-dimensional image correlation a priori. These equations include terms that represent the image noise and image contrast. Researchers at the University of South Carolina have extended previous 1D work to calculate matching errors in 2D. These 2D equations have been coded into a Sandia National Laboratories UQ software package to predict the uncertainty for DIC images. This paper presents those equations and the resulting error surfaces for trial speckle images. Comparison of the UQ results with experimentally subpixel-shifted images is also discussed.

  20. Development and Implementation of Photonuclear Cross-Section Data for Mutually Coupled Neutron-Photon Transport Calculations in the Monte Carlo N-Particle (MCNP) Radiation Transport Code

    SciTech Connect

    Morgan C. White

    2000-07-01

    The fundamental motivation for the research presented in this dissertation was the need to development a more accurate prediction method for characterization of mixed radiation fields around medical electron accelerators (MEAs). Specifically, a model is developed for simulation of neutron and other particle production from photonuclear reactions and incorporated in the Monte Carlo N-Particle (MCNP) radiation transport code. This extension of the capability within the MCNP code provides for the more accurate assessment of the mixed radiation fields. The Nuclear Theory and Applications group of the Los Alamos National Laboratory has recently provided first-of-a-kind evaluated photonuclear data for a select group of isotopes. These data provide the reaction probabilities as functions of incident photon energy with angular and energy distribution information for all reaction products. The availability of these data is the cornerstone of the new methodology for state-of-the-art mutually coupled photon-neutron transport simulations. The dissertation includes details of the model development and implementation necessary to use the new photonuclear data within MCNP simulations. A new data format has been developed to include tabular photonuclear data. Data are processed from the Evaluated Nuclear Data Format (ENDF) to the new class ''u'' A Compact ENDF (ACE) format using a standalone processing code. MCNP modifications have been completed to enable Monte Carlo sampling of photonuclear reactions. Note that both neutron and gamma production are included in the present model. The new capability has been subjected to extensive verification and validation (V&V) testing. Verification testing has established the expected basic functionality. Two validation projects were undertaken. First, comparisons were made to benchmark data from literature. These calculations demonstrate the accuracy of the new data and transport routines to better than 25 percent. Second, the ability to

  1. Final Report for "Client Server Software for the National Transport Code Collaboration"

    SciTech Connect

    John R Cary, Johan A Carlsson

    2006-06-16

    The Tech-X contribution to the NTCC project was completed on 03/31/06. Below are some of the highlights of the nal year. A TEQ users' meeting was held at the Sherwood 2005 conference and a tech-support mail list was created . The stand-alone separatrix module was added to the NTCC repository and is available on the web. For the main TEQ module a portable build system was developed (based on GNU Autotools and similar to the the separatrix build system). Especially IBM xlf had problems with mixed code (F77 with F90 snippets) in the same le and approximately 6000 lines of code was rewritten as pure F90. Circular dependencies between F90 modules were resolved to robustly allow correct compilation order. Exception handling was implemented in both the separatrix and TEQ modules and an user manual was written for TEQ. Johan Carlsson visited LLNL 05/16/05{05/20/05.

  2. MESTRN: A Deterministic Meson-Muon Transport Code for Space Radiation

    NASA Technical Reports Server (NTRS)

    Blattnig, Steve R.; Norbury, John W.; Norman, Ryan B.; Wilson, John W.; Singleterry, Robert C., Jr.; Tripathi, Ram K.

    2004-01-01

    A safe and efficient exploration of space requires an understanding of space radiations, so that human life and sensitive equipment can be protected. On the way to these sensitive sites, the radiation fields are modified in both quality and quantity. Many of these modifications are thought to be due to the production of pions and muons in the interactions between the radiation and intervening matter. A method used to predict the effects of the presence of these particles on the transport of radiation through materials is developed. This method was then used to develop software, which was used to calculate the fluxes of pions and muons after the transport of a cosmic ray spectrum through aluminum and water. Software descriptions are given in the appendices.

  3. Updated version of the DOT 4 one- and two-dimensional neutron/photon transport code

    SciTech Connect

    Rhoades, W.A.; Childs, R.L.

    1982-07-01

    DOT 4 is designed to allow very large transport problems to be solved on a wide range of computers and memory arrangements. Unusual flexibilty in both space-mesh and directional-quadrature specification is allowed. For example, the radial mesh in an R-Z problem can vary with axial position. The directional quadrature can vary with both space and energy group. Several features improve performance on both deep penetration and criticality problems. The program has been checked and used extensively.

  4. 2D barcodes: a novel and simple method for denture identification.

    PubMed

    Sudheendra, Udyavara S; Sowmya, Kasetty; Vidhi, Mathur; Shreenivas, Kallianpur; Prathamesh, Joshi

    2013-01-01

    Several methods of denture marking have been described in the literature. However, most of them are expensive, time-consuming, and do not permit the incorporation of large amounts of information. We propose a novel and simple method incorporating 2D codes which has several advantages over the existing methods. A 2D code was generated in the dental office and inserted into a maxillary denture. The code was then read using software downloaded into a mobile phone giving access to the website containing details about the patient. The denture was also subjected to durability tests, which did not hamper the efficacy of the 2D code. 2D coding for dentures is a simple, less expensive method with the potential of storing a large amount of information that can be accessed on-site by the forensic investigator, thus allowing quick identification of the denture wearer. PMID:22971078

  5. Parallel Monte Carlo transport modeling in the context of a time-dependent, three-dimensional multi-physics code

    SciTech Connect

    Procassini, R.J.

    1997-12-31

    The fine-scale, multi-space resolution that is envisioned for accurate simulations of complex weapons systems in three spatial dimensions implies flop-rate and memory-storage requirements that will only be obtained in the near future through the use of parallel computational techniques. Since the Monte Carlo transport models in these simulations usually stress both of these computational resources, they are prime candidates for parallelization. The MONACO Monte Carlo transport package, which is currently under development at LLNL, will utilize two types of parallelism within the context of a multi-physics design code: decomposition of the spatial domain across processors (spatial parallelism) and distribution of particles in a given spatial subdomain across additional processors (particle parallelism). This implementation of the package will utilize explicit data communication between domains (message passing). Such a parallel implementation of a Monte Carlo transport model will result in non-deterministic communication patterns. The communication of particles between subdomains during a Monte Carlo time step may require a significant level of effort to achieve a high parallel efficiency.

  6. Mercury + VisIt: Integration of a Real-Time Graphical Analysis Capability into a Monte Carlo Transport Code

    SciTech Connect

    O'Brien, M J; Procassini, R J; Joy, K I

    2009-03-09

    Validation of the problem definition and analysis of the results (tallies) produced during a Monte Carlo particle transport calculation can be a complicated, time-intensive processes. The time required for a person to create an accurate, validated combinatorial geometry (CG) or mesh-based representation of a complex problem, free of common errors such as gaps and overlapping cells, can range from days to weeks. The ability to interrogate the internal structure of a complex, three-dimensional (3-D) geometry, prior to running the transport calculation, can improve the user's confidence in the validity of the problem definition. With regard to the analysis of results, the process of extracting tally data from printed tables within a file is laborious and not an intuitive approach to understanding the results. The ability to display tally information overlaid on top of the problem geometry can decrease the time required for analysis and increase the user's understanding of the results. To this end, our team has integrated VisIt, a parallel, production-quality visualization and data analysis tool into Mercury, a massively-parallel Monte Carlo particle transport code. VisIt provides an API for real time visualization of a simulation as it is running. The user may select which plots to display from the VisIt GUI, or by sending VisIt a Python script from Mercury. The frequency at which plots are updated can be set and the user can visualize the simulation results as it is running.

  7. 2D and 3D PIC-MCC simulations of a low temperature magnetized plasma on CPU and GPU

    NASA Astrophysics Data System (ADS)

    Claustre, Jonathan; Chaudhury, Bhaskar; Fubiani, Gwenael; Boeuf, Jean-Pierre

    2012-10-01

    A Particle-In-Cell Monte Carlo Collisions model is used to described plasma transport in a low temperature magnetized plasma under conditions similar to those of the negative ion source for the neutral beam injector of ITER. A large diamagnetic electron current is present in the plasma because of the electron pressure gradient between the ICP driver of the source and the entrance of the magnetic filter, and is directed toward the chamber walls. The plasma potential adjusts to limit the diamagnetic electron current to the wall, leading to large electron current flow through the filter, and to a non uniform plasma density in the region between magnetic filter and extracting grids. On the basis of the PIC-MCC simulation results, we describe the plasma properties and electron current density distributions through the filter in 2D and 3D situations and use these models to better understand plasma transport across the filter in these conditions. We also present comparisons between computation times of two PIC-MCC simulation codes that have been developed for operations on standard CPU (Central Processing Units, code in Fortran) and on GPU (Graphics Processing Units, code in CUDA). The results show that the GPU simulation is about 25 times faster than the CPU one for a 2D domain with 512x512 grid points. The computation time ratio increases with the number of grid points.

  8. ITS Version 4.0: Electron/photon Monte Carlo transport codes

    SciTech Connect

    Halbleib, J.A,; Kensek, R.P.; Seltzer, S.M.

    1995-07-01

    The current publicly released version of the Integrated TIGER Series (ITS), Version 3.0, has been widely distributed both domestically and internationally, and feedback has been very positive. This feedback as well as our own experience have convinced us to upgrade the system in order to honor specific user requests for new features and to implement other new features that will improve the physical accuracy of the system and permit additional variance reduction. This presentation we will focus on components of the upgrade that (1) improve the physical model, (2) provide new and extended capabilities to the three-dimensional combinatorial-geometry (CG) of the ACCEPT codes, and (3) permit significant variance reduction in an important class of radiation effects applications.

  9. A Two-Dimensional Monte Carlo Code System for Linear Neutron Transport Calculations.

    1980-04-24

    Version 00 KIM (k-infinite-Monte Carlo) solves the steady-state linear neutron transport equation for a fixed source problem or, by successive fixed-source runs, for the eigenvalue problem, in a two-dimensional infinite thermal reactor lattice using the Monte Carlo method. In addition to the combinatorial description of domains, the program allows complex configurations to be represented by a discrete set of points whereby the calculation speed is greatly improved. Configurations are described as the result of overlaysmore » of elementary figures over a basic domain.« less

  10. 2D bifurcations and Newtonian properties of memristive Chua's circuits

    NASA Astrophysics Data System (ADS)

    Marszalek, W.; Podhaisky, H.

    2016-01-01

    Two interesting properties of Chua's circuits are presented. First, two-parameter bifurcation diagrams of Chua's oscillatory circuits with memristors are presented. To obtain various 2D bifurcation images a substantial numerical effort, possibly with parallel computations, is needed. The numerical algorithm is described first and its numerical code for 2D bifurcation image creation is available for free downloading. Several color 2D images and the corresponding 1D greyscale bifurcation diagrams are included. Secondly, Chua's circuits are linked to Newton's law φ ''= F(t,φ,φ')/m with φ=\\text{flux} , constant m > 0, and the force term F(t,φ,φ') containing memory terms. Finally, the jounce scalar equations for Chua's circuits are also discussed.

  11. Simulations of an accelerator-based shielding experiment using the particle and heavy-ion transport code system PHITS.

    PubMed

    Sato, T; Sihver, L; Iwase, H; Nakashima, H; Niita, K

    2005-01-01

    In order to estimate the biological effects of HZE particles, an accurate knowledge of the physics of interaction of HZE particles is necessary. Since the heavy ion transport problem is a complex one, there is a need for both experimental and theoretical studies to develop accurate transport models. RIST and JAERI (Japan), GSI (Germany) and Chalmers (Sweden) are therefore currently developing and bench marking the General-Purpose Particle and Heavy-Ion Transport code System (PHITS), which is based on the NMTC and MCNP for nucleon/meson and neutron transport respectively, and the JAM hadron cascade model. PHITS uses JAERI Quantum Molecular Dynamics (JQMD) and the Generalized Evaporation Model (GEM) for calculations of fission and evaporation processes, a model developed at NASA Langley for calculation of total reaction cross sections, and the SPAR model for stopping power calculations. The future development of PHITS includes better parameterization in the JQMD model used for the nucleus-nucleus reactions, and improvement of the models used for calculating total reaction cross sections, and addition of routines for calculating elastic scattering of heavy ions, and inclusion of radioactivity and burn up processes. As a part of an extensive bench marking of PHITS, we have compared energy spectra of secondary neutrons created by reactions of HZE particles with different targets, with thicknesses ranging from <1 to 200 cm. We have also compared simulated and measured spatial, fluence and depth-dose distributions from different high energy heavy ion reactions. In this paper, we report simulations of an accelerator-based shielding experiment, in which a beam of 1 GeV/n Fe-ions has passed through thin slabs of polyethylene, Al, and Pb at an acceptance angle up to 4 degrees. PMID:15934196

  12. Simulations of an accelerator-based shielding experiment using the particle and heavy-ion transport code system PHITS

    NASA Astrophysics Data System (ADS)

    Sato, T.; Sihver, L.; Iwase, H.; Nakashima, H.; Niita, K.

    In order to estimate the biological effects of HZE particles, an accurate knowledge of the physics of interaction of HZE particles is necessary. Since the heavy ion transport problem is a complex one, there is a need for both experimental and theoretical studies to develop accurate transport models. RIST and JAERI (Japan), GSI (Germany) and Chalmers (Sweden) are therefore currently developing and bench marking the General-Purpose Particle and Heavy-Ion Transport code System (PHITS), which is based on the NMTC and MCNP for nucleon/meson and neutron transport respectively, and the JAM hadron cascade model. PHITS uses JAERI Quantum Molecular Dynamics (JQMD) and the Generalized Evaporation Model (GEM) for calculations of fission and evaporation processes, a model developed at NASA Langley for calculation of total reaction cross sections, and the SPAR model for stopping power calculations. The future development of PHITS includes better parameterization in the JQMD model used for the nucleus-nucleus reactions, and improvement of the models used for calculating total reaction cross sections, and addition of routines for calculating elastic scattering of heavy ions, and inclusion of radioactivity and burn up processes. As a part of an extensive bench marking of PHITS, we have compared energy spectra of secondary neutrons created by reactions of HZE particles with different targets, with thicknesses ranging from <1 to 200 cm. We have also compared simulated and measured spatial, fluence and depth-dose distributions from different high energy heavy ion reactions. In this paper, we report simulations of an accelerator-based shielding experiment, in which a beam of 1 GeV/n Fe-ions has passed through thin slabs of polyethylene, Al, and Pb at an acceptance angle up to 4°.

  13. Simulation of the full-core pin-model by JMCT Monte Carlo neutron-photon transport code

    SciTech Connect

    Li, D.; Li, G.; Zhang, B.; Shu, L.; Shangguan, D.; Ma, Y.; Hu, Z.

    2013-07-01

    Since the large numbers of cells over a million, the tallies over a hundred million and the particle histories over ten billion, the simulation of the full-core pin-by-pin model has become a real challenge for the computers and the computational methods. On the other hand, the basic memory of the model has exceeded the limit of a single CPU, so the spatial domain and data decomposition must be considered. JMCT (J Monte Carlo Transport code) has successful fulfilled the simulation of the full-core pin-by-pin model by the domain decomposition and the nested parallel computation. The k{sub eff} and flux of each cell are obtained. (authors)

  14. Enhancements to the Combinatorial Geometry Particle Tracker in the Mercury Monte Carlo Transport Code: Embedded Meshes and Domain Decomposition

    SciTech Connect

    Greenman, G M; O'Brien, M J; Procassini, R J; Joy, K I

    2009-03-09

    Two enhancements to the combinatorial geometry (CG) particle tracker in the Mercury Monte Carlo transport code are presented. The first enhancement is a hybrid particle tracker wherein a mesh region is embedded within a CG region. This method permits efficient calculations of problems with contain both large-scale heterogeneous and homogeneous regions. The second enhancement relates to the addition of parallelism within the CG tracker via spatial domain decomposition. This permits calculations of problems with a large degree of geometric complexity, which are not possible through particle parallelism alone. In this method, the cells are decomposed across processors and a particles is communicated to an adjacent processor when it tracks to an interprocessor boundary. Applications that demonstrate the efficacy of these new methods are presented.

  15. Development of a GPU-based Monte Carlo dose calculation code for coupled electron-photon transport.

    PubMed

    Jia, Xun; Gu, Xuejun; Sempau, Josep; Choi, Dongju; Majumdar, Amitava; Jiang, Steve B

    2010-06-01

    Monte Carlo simulation is the most accurate method for absorbed dose calculations in radiotherapy. Its efficiency still requires improvement for routine clinical applications, especially for online adaptive radiotherapy. In this paper, we report our recent development on a GPU-based Monte Carlo dose calculation code for coupled electron-photon transport. We have implemented the dose planning method (DPM) Monte Carlo dose calculation package (Sempau et al 2000 Phys. Med. Biol. 45 2263-91) on the GPU architecture under the CUDA platform. The implementation has been tested with respect to the original sequential DPM code on the CPU in phantoms with water-lung-water or water-bone-water slab geometry. A 20 MeV mono-energetic electron point source or a 6 MV photon point source is used in our validation. The results demonstrate adequate accuracy of our GPU implementation for both electron and photon beams in the radiotherapy energy range. Speed-up factors of about 5.0-6.6 times have been observed, using an NVIDIA Tesla C1060 GPU card against a 2.27 GHz Intel Xeon CPU processor. PMID:20463376

  16. DOS-HEATING6: A general conduction code with nuclear heat generation derived from DOT-IV transport calculations

    SciTech Connect

    Williams, M.L.; Yuecel, A.; Nadkarny, S.

    1988-05-01

    The HEATING6 heat conduction code is modified to (a) read the multigroup particle fluxes from a two-dimensional DOT-IV neutron- photon transport calculation, (b) interpolate the fluxes from the DOT-IV variable (optional) mesh to the HEATING6 control volume mesh, and (c) fold the interpolated fluxes with kerma factors to obtain a nuclear heating source for the heat conduction equation. The modified HEATING6 is placed as a module in the ORNL discrete ordinates system (DOS), and has been renamed DOS-HEATING6. DOS-HEATING6 provides the capability for determining temperature distributions due to nuclear heating in complex, multi-dimensional systems. All of the original capabilities of HEATING6 are retained for the nuclear heating calculation; e.g., generalized boundary conditions (convective, radiative, finned, fixed temperature or heat flux), temperature and space dependent thermal properties, steady-state or transient analysis, general geometry description, etc. The numerical techniques used in the code are reviewed and the user input instructions and JCL to perform DOS-HEATING6 calculations are presented. Finally a sample problem involving coupled DOT-IV and DOS-HEATING6 calculations of a complex space-reactor configurations described, and the input and output of the calculations are listed. 10 refs., 11 figs., 6 tabs.

  17. NKG2D ligands as therapeutic targets

    PubMed Central

    Spear, Paul; Wu, Ming-Ru; Sentman, Marie-Louise; Sentman, Charles L.

    2013-01-01

    The Natural Killer Group 2D (NKG2D) receptor plays an important role in protecting the host from infections and cancer. By recognizing ligands induced on infected or tumor cells, NKG2D modulates lymphocyte activation and promotes immunity to eliminate ligand-expressing cells. Because these ligands are not widely expressed on healthy adult tissue, NKG2D ligands may present a useful target for immunotherapeutic approaches in cancer. Novel therapies targeting NKG2D ligands for the treatment of cancer have shown preclinical success and are poised to enter into clinical trials. In this review, the NKG2D receptor and its ligands are discussed in the context of cancer, infection, and autoimmunity. In addition, therapies targeting NKG2D ligands in cancer are also reviewed. PMID:23833565

  18. Coupling external radiation transport code results to the GADRAS detector response function.

    SciTech Connect

    Mitchell, Dean J; Thoreson, Gregory G.; Horne, Steven M.

    2014-01-01

    Simulating gamma spectra is useful for analyzing special nuclear materials. Gamma spectra are influenced not only by the source and the detector, but also by the external, and potentially complex scattering environment. The scattering environment can make accurate representations of gamma spectra difficult to obtain. By coupling the Monte Carlo Nuclear Particle (MCNP) code with the Gamma Detector Response and Analysis Software (GADRAS) detector response function, gamma spectrum simulations can be computed with a high degree of fidelity even in the presence of a complex scattering environment. Traditionally, GADRAS represents the external scattering environment with empirically derived scattering parameters. By modeling the external scattering environment in MCNP and using the results as input for the GADRAS detector response function, gamma spectra can be obtained with a high degree of fidelity. This method was verified with experimental data obtained in an environment with a significant amount of scattering material. The experiment used both gamma-emitting sources and moderated and bare neutron-emitting sources. The sources were modeled using GADRAS and MCNP in the presence of the external scattering environment, producing accurate representations of the experimental data.

  19. ITS; The intergrated TIGER series of electron/photon transport codes-version 3. 0

    SciTech Connect

    Halbleib, J. A.; Kensek, R.P. ); Valdez, G.D. ); Seltzer, S.M.; Berger, M.J. )

    1992-08-01

    This paper reports on the ITS system which is a powerful and use-friendly software package permitting state-of-the-art Monte Carlo solution of linear time-independent coupled electron/photon radiation transport problems, with or without the presence of macroscopic electric and magnetic fields of arbitrary spatial dependence. Version 3.0 is a major upgrade of the system with important improvements in the physical model, variance reduction, I/O, and user friendliness. Improvements to the cross-section generator include the replacement of Born-approximation bremsstrahlung cross sections with the results of numerical phase-shift calculations, the addition of coherent scattering and binding effects in incoherent scattering, an upgrade of collisional and radiative stopping powers, and a complete rewrite to Fortran 77 standards emphasizing Block-IF structure.

  20. Towards scalable parellelism in Monte Carlo particle transport codes using remote memory access

    SciTech Connect

    Romano, Paul K; Brown, Forrest B; Forget, Benoit

    2010-01-01

    One forthcoming challenge in the area of high-performance computing is having the ability to run large-scale problems while coping with less memory per compute node. In this work, they investigate a novel data decomposition method that would allow Monte Carlo transport calculations to be performed on systems with limited memory per compute node. In this method, each compute node remotely retrieves a small set of geometry and cross-section data as needed and remotely accumulates local tallies when crossing the boundary of the local spatial domain. initial results demonstrate that while the method does allow large problems to be run in a memory-limited environment, achieving scalability may be difficult due to inefficiencies in the current implementation of RMA operations.