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Sample records for 2s 3r 4s

  1. Stereospecific enzymatic transformation of alpha-ketoglutarate to (2S,3R)-3-methyl glutamate during acidic lipopeptide biosynthesis.

    PubMed

    Mahlert, Christoph; Kopp, Florian; Thirlway, Jenny; Micklefield, Jason; Marahiel, Mohamed A

    2007-10-01

    The acidic lipopeptides, including the calcium-dependent antibiotics (CDA), daptomycin, and A54145, are important macrocyclic peptide natural products produced by Streptomyces species. All three compounds contain a 3-methyl glutamate (3-MeGlu) as the penultimate C-terminal residue, which is important for bioactivity. Here, biochemical in vitro reconstitution of the 3-MeGlu biosynthetic pathway is presented, using exclusively enzymes from the CDA producer Streptomyces coelicolor. It is shown that the predicted 3-MeGlu methyltransferase GlmT and its homologues DptI from the daptomycin producer Streptomyces roseosporus and LptI from the A54145 producer Streptomyces fradiae do not methylate free glutamic acid, PCP-bound glutamate, or Glu-containing CDA in vitro. Instead, GlmT, DptI, and LptI are S-adenosyl methionine (SAM)-dependent alpha-ketoglutarate methyltransferases that catalyze the stereospecific methylation of alpha-ketoglutarate (alphaKG) leading to (3R)-3-methyl-2-oxoglutarate. Subsequent enzyme screening identified the branched chain amino acid transaminase IlvE (SCO5523) as an efficient catalyst for the transformation of (3R)-3-methyl-2-oxoglutarate into (2S,3R)-3-MeGlu. Comparison of reversed-phase HPLC retention time of dabsylated 3-MeGlu generated by the coupled enzymatic reaction with dabsylated synthetic standards confirmed complete stereocontrol during enzymatic catalysis. This stereospecific two-step conversion of alphaKG to (2S,3R)-3-MeGlu completes our understanding of the biosynthesis and incorporation of beta-methylated amino acids into the nonribosomal lipopeptides. Finally, understanding this pathway may provide new possibilities for the production of modified peptides in engineered microbes. PMID:17784761

  2. Observation of Upsilon(4S) decays to pi(+)pi(-)Upsilon(1S) and pi(+)pi(-)Upsilon(2S).

    PubMed

    Aubert, B; Barate, R; Bona, M; Boutigny, D; Couderc, F; Karyotakis, Y; Lees, J P; Poireau, V; Tisserand, V; Zghiche, A; Grauges, E; Palano, A; Chen, J C; Qi, N D; Rong, G; Wang, P; Zhu, Y S; Eigen, G; Ofte, I; Stugu, B; Abrams, G S; Battaglia, M; Brown, D N; Button-Shafer, J; Cahn, R N; Charles, E; Gill, M S; Groysman, Y; Jacobsen, R G; Kadyk, J A; Kerth, L T; Kolomensky, Yu G; Kukartsev, G; Lynch, G; Mir, L M; Oddone, P J; Orimoto, T J; Pripstein, M; Roe, N A; Ronan, M T; Wenzel, W A; Barrett, M; Ford, K E; Harrison, T J; Hart, A J; Hawkes, C M; Morgan, S E; Watson, A T; Goetzen, K; Held, T; Koch, H; Lewandowski, B; Pelizaeus, M; Peters, K; Schroeder, T; Steinke, M; Boyd, J T; Burke, J P; Cottingham, W N; Walker, D; Cuhadar-Donszelmann, T; Fulsom, B G; Hearty, C; Knecht, N S; Mattison, T S; McKenna, J A; Khan, A; Kyberd, P; Saleem, M; Teodorescu, L; Blinov, V E; Bukin, A D; Druzhinin, V P; Golubev, V B; Onuchin, A P; Serednyakov, S I; Skovpen, Yu I; Solodov, E P; Todyshev, K Yu; Best, D S; Bondioli, M; Bruinsma, M; Chao, M; Curry, S; Eschrich, I; Kirkby, D; Lankford, A J; Lund, P; Mandelkern, M; Mommsen, R K; Roethel, W; Stoker, D P; Abachi, S; Buchanan, C; Foulkes, S D; Gary, J W; Long, O; Shen, B C; Wang, K; Zhang, L; Hadavand, H K; Hill, E J; Paar, H P; Rahatlou, S; Sharma, V; Berryhill, J W; Campagnari, C; Cunha, A; Dahmes, B; Hong, T M; Kovalskyi, D; Richman, J D; Beck, T W; Eisner, A M; Flacco, C J; Heusch, C A; Kroseberg, J; Lockman, W S; Nesom, G; Schalk, T; Schumm, B A; Seiden, A; Spradlin, P; Williams, D C; Wilson, M G; Albert, J; Chen, E; Dvoretskii, A; Hitlin, D G; Narsky, I; Piatenko, T; Porter, F C; Ryd, A; Samuel, A; Andreassen, R; Mancinelli, G; Meadows, B T; Sokoloff, M D; Blanc, F; Bloom, P C; Chen, S; Ford, W T; Hirschauer, J F; Kreisel, A; Nauenberg, U; Olivas, A; Ruddick, W O; Smith, J G; Ulmer, K A; Wagner, S R; Zhang, J; Chen, A; Eckhart, E A; Soffer, A; Toki, W H; Wilson, R J; Winklmeier, F; Zeng, Q; Altenburg, D D; Feltresi, E; Hauke, A; Jasper, H; Spaan, B; Brandt, T; Klose, V; Lacker, H M; Mader, W F; Nogowski, R; Petzold, A; Schubert, J; Schubert, K R; Schwierz, R; Sundermann, J E; Volk, A; Bernard, D; Bonneaud, G R; Grenier, P; Latour, E; Thiebaux, Ch; Verderi, M; Bard, D J; Clark, P J; Gradl, W; Muheim, F; Playfer, S; Robertson, A I; Xie, Y; Andreotti, M; Bettoni, D; Bozzi, C; Calabrese, R; Cibinetto, G; Luppi, E; Negrini, M; Petrella, A; Piemontese, L; Prencipe, E; Anulli, F; Baldini-Ferroli, R; Calcaterra, A; de Sangro, R; Finocchiaro, G; Pacetti, S; Patteri, P; Peruzzi, I M; Piccolo, M; Rama, M; Zallo, A; Buzzo, A; Capra, R; Contri, R; Lo Vetere, M; Macri, M M; Monge, M R; Passaggio, S; Patrignani, C; Robutti, E; Santroni, A; Tosi, S; Brandenburg, G; Chaisanguanthum, K S; Morii, M; Wu, J; Dubitzky, R S; Marks, J; Schenk, S; Uwer, U; Bhimji, W; Bowerman, D A; Dauncey, P D; Egede, U; Flack, R L; Gaillard, J R; Nash, J A; Nikolich, M B; Panduro Vazquez, W; Chai, X; Charles, M J; Mallik, U; Meyer, N T; Ziegler, V; Cochran, J; Crawley, H B; Dong, L; Eyges, V; Meyer, W T; Prell, S; Rosenberg, E I; Rubin, A E; Gritsan, A V; Fritsch, M; Schott, G; Arnaud, N; Davier, M; Grosdidier, G; Höcker, A; Le Diberder, F; Lepeltier, V; Lutz, A M; Oyanguren, A; Pruvot, S; Rodier, S; Roudeau, P; Schune, M H; Stocchi, A; Wang, W F; Wormser, G; Cheng, C H; Lange, D J; Wright, D M; Chavez, C A; Forster, I J; Fry, J R; Gabathuler, E; Gamet, R; George, K A; Hutchcroft, D E; Payne, D J; Schofield, K C; Touramanis, C; Bevan, A J; Di Lodovico, F; Menges, W; Sacco, R; Brown, C L; Cowan, G; Flaecher, H U; Hopkins, D A; Jackson, P S; McMahon, T R; Ricciardi, S; Salvatore, F; Brown, D N; Davis, C L; Allison, J; Barlow, N R; Barlow, R J; Chia, Y M; Edgar, C L; Kelly, M P; Lafferty, G D; Naisbit, M T; Williams, J C; Yi, J I; Chen, C; Hulsbergen, W D; Jawahery, A; Lae, C K; Roberts, D A; Simi, G; Blaylock, G; Dallapiccola, C; Hertzbach, S S; Li, X; Moore, T B; Saremi, S; Staengle, H; Willocq, S Y; Cowan, R; Koeneke, K; Sciolla, G; Sekula, S J; Spitznagel, M; Taylor, F; Yamamoto, R K; Kim, H; Patel, P M; Robertson, S H; Lazzaro, A; Lombardo, V; Palombo, F; Bauer, J M; Cremaldi, L; Eschenburg, V; Godang, R; Kroeger, R; Reidy, J; Sanders, D A; Summers, D J; Zhao, H W; Brunet, S; Côté, D; Taras, P; Viaud, F B; Nicholson, H; Cavallo, N; De Nardo, G; Del Re, D; Fabozzi, F; Gatto, C; Lista, L; Monorchio, D; Paolucci, P; Piccolo, D; Sciacca, C; Baak, M; Bulten, H; Raven, G; Snoek, H L; Jessop, C P; Losecco, J M; Allmendinger, T; Benelli, G; Gan, K K; Honscheid, K; Hufnagel, D; Jackson, P D; Kagan, H; Kass, R; Pulliam, T; Rahimi, A M; Ter-Antonyan, R; Wong, Q K; Blount, N L; Brau, J; Frey, R; Igonkina, O; Lu, M; Potter, C T; Rahmat, R; Sinev, N B; Strom, D; Strube, J; Torrence, E; Galeazzi, F; Gaz, A; Margoni, M; Morandin, M; Pompili, A; Posocco, M; Rotondo, M; Simonetto, F; Stroili, R; Voci, C; Benayoun, M; Chauveau, J; David, P; Del Buono, L; de la Vaissière, Ch; Hamon, O; Hartfiel, B L; John, M J J; Malclès, J; Ocariz, J; Roos, L; Therin, G; Behera, P K; Gladney, L; Panetta, J; Biasini, M; Covarelli, R; Pioppi, M; Angelini, C; Batignani, G; Bettarini, S; Bucci, F; Calderini, G; Carpinelli, M; Cenci, R; Forti, F; Giorgi, M A; Lusiani, A; Marchiori, G; Mazur, M A; Morganti, M; Neri, N; Rizzo, G; Walsh, J; Haire, M; Judd, D; Wagoner, D E; Biesiada, J; Danielson, N; Elmer, P; Lau, Y P; Lu, C; Olsen, J; Smith, A J S; Telnov, A V; Bellini, F; Cavoto, G; D'Orazio, A; Di Marco, E; Faccini, R; Ferrarotto, F; Ferroni, F; Gaspero, M; Li Gioi, L; Mazzoni, M A; Morganti, S; Piredda, G; Polci, F; Safai Tehrani, F; Voena, C; Ebert, M; Schröder, H; Waldi, R; Adye, T; De Groot, N; Franek, B; Olaiya, E O; Wilson, F F; Emery, S; Gaidot, A; Ganzhur, S F; Hamel de Monchenault, G; Kozanecki, W; Legendre, M; Vasseur, G; Yèche, Ch; Zito, M; Park, W; Purohit, M V; Wilson, J R; Allen, M T; Aston, D; Bartoldus, R; Bechtle, P; Berger, N; Boyarski, A M; Claus, R; Coleman, J P; Convery, M R; Cristinziani, M; Dingfelder, J C; Dong, D; Dorfan, J; Dubois-Felsmann, G P; Dujmic, D; Dunwoodie, W; Field, R C; Glanzman, T; Gowdy, S J; Graham, M T; Halyo, V; Hast, C; Hryn'ova, T; Innes, W R; Kelsey, M H; Kim, P; Kocian, M L; Leith, D W G S; Li, S; Libby, J; Luitz, S; Luth, V; Lynch, H L; Macfarlane, D B; Marsiske, H; Messner, R; Muller, D R; O'grady, C P; Ozcan, V E; Perl, M; Perazzo, A; Ratcliff, B N; Roodman, A; Salnikov, A A; Schindler, R H; Schwiening, J; Snyder, A; Stelzer, J; Su, D; Sullivan, M K; Suzuki, K; Swain, S K; Thompson, J M; Va'vra, J; van Bakel, N; Weaver, M; Weinstein, A J R; Wisniewski, W J; Wittgen, M; Wright, D H; Yarritu, A K; Yi, K; Young, C C; Burchat, P R; Edwards, A J; Majewski, S A; Petersen, B A; Roat, C; Wilden, L; Ahmed, S; Alam, M S; Bula, R; Ernst, J A; Jain, V; Pan, B; Saeed, M A; Wappler, F R; Zain, S B; Bugg, W; Krishnamurthy, M; Spanier, S M; Eckmann, R; Ritchie, J L; Satpathy, A; Schilling, C J; Schwitters, R F; Izen, J M; Kitayama, I; Lou, X C; Ye, S; Bianchi, F; Gallo, F; Gamba, D; Bomben, M; Bosisio, L; Cartaro, C; Cossutti, F; Della Ricca, G; Dittongo, S; Grancagnolo, S; Lanceri, L; Vitale, L; Azzolini, V; Martinez-Vidal, F; Banerjee, Sw; Bhuyan, B; Brown, C M; Fortin, D; Hamano, K; Kowalewski, R; Nugent, I M; Roney, J M; Sobie, R J; Back, J J; Harrison, P F; Latham, T E; Mohanty, G B; Pappagallo, M; Band, H R; Chen, X; Cheng, B; Dasu, S; Datta, M; Eichenbaum, A M; Flood, K T; Hollar, J J; Kutter, P E; Li, H; Liu, R; Mellado, B; Mihalyi, A; Mohapatra, A K; Pan, Y; Pierini, M; Prepost, R; Tan, P; Wu, S L; Yu, Z; Neal, H

    2006-06-16

    Observation of Upsilon(4S) decays to pi(+)pi(-)C and pi(+)pi(-)Upsilon(2S)We present the first measurement of Upsilon(4S) decays to pi(+)pi(-)Upsilon(1S) based on a sample of 230 x 106(4S) mesons collected with the BABAR detector. We measure the product branching fractions Beta(Upsilon(4S) --> pi(+)pi(-)Upsilon(1S)) x BetaUpsilon(1S) --> mu(+)mu(-) = (2.23 +/- 0.25(stat) +/- 0.27(syst))x 10(-6) and Beta(Upsilon(4S) --> pi(+)pi(-)Upsilon(2S) x Beta(Upsilon(2S) --> mu(+)mu(-))=(1.69 +/-0.26(stat) +/- 0.20(syst)) x 10(-)6, from which we derive the partial widths Gamma(Upsilon(4S) --> pi(+)pi(-)Upsilon(1S))=(1.8 +/-0.4) keV and Gamma(Upsilon(4S) --> pi(+)pi(-)Upsilon(2S))=(2.7 +/- 0.8) keV. PMID:16803371

  3. [18F](2S,4S)-4-(3-Fluoropropyl)glutamine as a Tumor Imaging Agent

    PubMed Central

    2015-01-01

    Although the growth and proliferation of most tumors is fueled by glucose, some tumors are more likely to metabolize glutamine. In particular, tumor cells with the upregulated c-Myc gene are generally reprogrammed to utilize glutamine. We have developed new 3-fluoropropyl analogs of glutamine, namely [18F](2S,4R)- and [18F](2S,4S)-4-(3-fluoropropyl)glutamine, 3 and 4, to be used as probes for studying glutamine metabolism in these tumor cells. Optically pure isomers labeled with 18F and 19F (2S,4S) and (2S,4R)-4-(3-fluoropropyl)glutamine were synthesized via different routes and isolated in high radiochemical purity (≥95%). Cell uptake studies of both isomers showed that they were taken up efficiently by 9L tumor cells with a steady increase over a time frame of 120 min. At 120 min, their uptake was approximately two times higher than that of l-[3H]glutamine ([3H]Gln). These in vitro cell uptake studies suggested that the new probes are potential tumor imaging agents. Yet, the lower chemical yield of the precursor for 3, as well as the low radiochemical yield for 3, limits the availability of [18F](2S,4R)-4-(3-fluoropropyl)glutamine, 3. We, therefore, focused on [18F](2S,4S)-4-(3-fluoropropyl)glutamine, 4. The in vitro cell uptake studies suggested that the new probe, [18F](2S,4S)-4-(3-fluoropropyl)glutamine, 4, is most sensitive to the LAT transport system, followed by System N and ASC transporters. A dual-isotope experiment using l-[3H]glutamine and the new probe showed that the uptake of [3H]Gln into 9L cells was highly associated with macromolecules (>90%), whereas the [18F](2S,4S)-4-(3-fluoropropyl)glutamine, 4, was not (<10%). This suggests a different mechanism of retention. In vivo PET imaging studies demonstrated tumor-specific uptake in rats bearing 9L xenographs with an excellent tumor to muscle ratio (maximum of ∼8 at 40 min). [18F](2S,4S)-4-(3-fluoropropyl)glutamine, 4, may be useful for testing tumors that may metabolize glutamine related amino

  4. Heterologous overproduction of 2[4Fe4S]- and [2Fe2S]-type clostridial ferredoxins and [2Fe2S]-type agrobacterial ferredoxin.

    PubMed

    Huang, Haiyan; Hu, Liejie; Yu, Wenjun; Li, Huili; Tao, Fei; Xie, Huijun; Wang, Shuning

    2016-05-01

    Ferredoxins are small, acidic proteins containing iron-sulfur clusters that are widespread in living organisms. They play key roles as electron carriers in various metabolic processes, including respiration, photosynthesis, fermentation, nitrogen fixation, carbon dioxide fixation, and hydrogen production. However, only several kinds of ferredoxins are commercially available now, greatly limiting the investigation of ferredoxin-related enzymes and metabolic processes. Here we describe the heterologous overproduction of 2[4Fe4S]- and [2Fe2S]-type clostridial ferredoxins and [2Fe2S]-type agrobacterial ferredoxin. Adding extra iron and sulfur sources to the medium in combination with using Escherichia coli C41(DE3) harboring pCodonplus and pRKISC plasmids as host greatly enhanced iron-sulfur cluster synthesis in the three ferredoxins. After induction for 12 h in terrific broth and purification by affinity chromatography and anion exchange chromatography, approximately 3.4 mg of streptavidin (Strep)-tagged and 3.7 mg of polyhistidine (His)-tagged clostridial 2[4Fe4S] ferredoxins were obtained from 1 l of culture. Excitingly, after induction for 24 h in terrific broth, around 40 mg of His-tagged clostridial [2Fe2S] and 23 mg of His-tagged agrobacterial [2Fe2S] ferredoxins were purified from 1 l of culture. The recombinant ferredoxins apparently exhibited identical properties and physiological function to native ferredoxins. No negative impact of two different affinity tags on ferredoxin activity was found. In conclusion, we successfully developed a convenient method for heterologous overproduction of the three kinds of ferredoxins with satisfactory yields and activities, which would be very helpful for the ferredoxin-related researches. PMID:26748213

  5. N2S2 and N4S4 precursors to PS2 macrocycles and cyclic amidinium salts.

    PubMed

    Cox, Katrina; Kariuki, Benson M; Smyth, Alexander; Newman, Paul D

    2016-05-28

    The cyclo-condensation of 1R,2R-diaminocyclohexane with 2,2'-(ethane-1,2-diyldisulfanediyl)dibenzaldehyde gave the 1 : 1 addition compound chxn-(im)N2S2 in high yield. When the same condensation reaction was performed with 1R,3S-diamino-1,7,7-trimethylcyclopentane as the diamine, the 2 : 2 addition compound tmcp-(im)N4S4 was obtained selectively. Reduction of the diimines gave the saturated analogues chxn-N2S2 (1) and tmcp-N4S4 (3) the former of which could be phosphorylated with PhP(NMe2)2 to give the novel 13-membered macrocycle chxn-PS2, 2. Introduction of the phenylphosphine function proved stereoselective with a preference for the N(R)/N(S) configuration at the nitrogen atoms. The coordination chemistry of the novel phosphine has been explored with Cu(i) and Mo(0) through formation of the complexes Cu(2)I, 4, and Mo(CO)3(2), 5. Extension of the phosphorylation chemistry to tmcp-N4S4 (3) proved unsuccessful but ring closure reactions of both 1 and 3 with triethylorthoformate gave cyclic amidinium salts which are potential precursors to macrocyclic N-heterocyclic carbenes. PMID:27112102

  6. Anticonvulsant activity of a mGlu(4alpha) receptor selective agonist, (1S,3R,4S)-1-aminocyclopentane-1,2,4-tricarboxylic acid.

    PubMed

    Chapman, A G; Talebi, A; Yip, P K; Meldrum, B S

    2001-07-20

    The metabotropic Group III agonist, (1S,3R,4S)-1-aminocyclopentane-1,2,4-tricarboxylic acid (ACPT-1), selective for the mGlu(4alpha) receptor, suppresses sound-induced seizures in DBA/2 mice following its intracerebroventricular (i.c.v.) administration (ED(50) 5.6 [2.9-10.7], nmol i.c.v., 15 min, clonic phase) and in genetically epilepsy-prone (GEP) rats following focal administration into the inferior colliculus (ED(50) 0.08 [0.01-0.50], nmol, 60 min, clonic phase). ACPT-1 also protects against clonic seizures induced in DBA/2 mice by the Group I agonist, (RS)-3,5-dihydroxyphenylglycine (3,5-DHPG) (ED(50) 0.60 [0.29-1.2], nmol i.c.v.) and by the Group III antagonist, (RS)-alpha-methylserine-O-phosphate (MSOP) (ED(50) 49.3 [37.9-64.1], nmol i.c.v.). Another Group III agonist, (RS)-4-phosphonophenyl-glycine (PPG), preferentially activating the mGlu(8) receptor, previously shown to protect against sound-induced seizures in DBA/2 mice and GEP rats, also protects against seizures induced in DBA/2 by 3,5-DHPG (ED(50) 3.7 [2.4-5.7], nmol i.c.v.) and by the Group III antagonist, MSOP (ED(50) 40.2 [21.0-77.0], nmol i.c.v.). At very high doses (500 nmol i.c.v. and above), Group III antagonists have pro-convulsant and convulsant activity. The anticonvulsant protection against sound-induced seizures in DBA/2 mice provided by a fully protective dose (20 nmol, i.c.v.) of the mGlu(4) receptor agonist ACPT-1, is partially reversed by the co-administration of the Group III antagonists, MSOP, (RS)-alpha-methyl-4-phosphonophenylglycine (MPPG) or (S)-2-amino-2-methyl-4-phosphonobutanoic acid (MAP4), in the 20-50 nmol dose range. At doses of 50-200 nmol, MPPG and MAP4 cause further reversal of the ACPT-1 anticonvulsant protection, while the MSOP effect on ACPT-1 protection is abolished at higher doses. In contrast, the anticonvulsant protection against sound-induced seizures in DBA/2 mice provided by a fully protective dose (20 nmol, i.c.v.) of the mGlu(8) receptor agonist PPG, is not

  7. Calculation of the total electron excitation cross section in the Born approximation using Slater wave functions for the Li (2s yields 2p), Li (2s yields 3p), Na (3s yields 4p), Mg (3p yields 4s), Ca (4s yields 4p) and K (4s yields 4p) excitations. M.S. Thesis

    NASA Technical Reports Server (NTRS)

    Simsic, P. L.

    1974-01-01

    Excitation of neutral atoms by inelastic scattering of incident electrons in gaseous nebulae were investigated using Slater Wave functions to describe the initial and final states of the atom. Total cross sections using the Born Approximation are calculated for: Li(2s yields 2p), Na(3s yields 4p), k(4s yields 4p). The intensity of emitted radiation from gaseous nebulae is also calculated, and Maxwell distribution is employed to average the kinetic energy of electrons.

  8. Electron excitation cross sections for the 2s(2)2p(3)4S(O) -- 2s(2)2p(3)2D(O) (forbidden) and 4S(O) -- 2s2p(4) 4P (resonance) transitions in O II

    NASA Technical Reports Server (NTRS)

    Zuo, M.; Smith, Steven J.; Chutjian, A.; Williams, I. D.; Tayal, S. S.; Mclaughlin, Brendan M.

    1995-01-01

    Experimental and theoretical excitation cross sections are reported for the first forbidden transition 4S(O) -- 2S(2)2p(3) 2D(O) (lambda-lambda 3726, 3729) and the first allowed (resonance) transition 4S(O) -- 2s2p(4) 4P(lambda-833) in O II. Use is made of electron energy loss and merged-beams methods. The electron energy range covered is 3.33 (threshold) to 15 eV for the S -- D transition, and 14.9 (threshold) to 40 eV for the S -- P transition. Care was taken to assess and minimize the metastable fraction of the O II beam. An electron mirror was designed and tested to reflect inelastically backscattered electrons into the forward direction to account for the full range of polar scattering angles. Comparisons are made between present experiments and 11-state R-matrix calculations. Calculations are also presented for the 4S(O) -- 2s(2)2p(3)2P(O) (lambda-2470) transition.

  9. Isotope shift of 40,42,44,48Ca in the 4s 2S1/2 → 4p 2P3/2 transition

    NASA Astrophysics Data System (ADS)

    Gorges, C.; Blaum, K.; Frömmgen, N.; Geppert, Ch; Hammen, M.; Kaufmann, S.; Krämer, J.; Krieger, A.; Neugart, R.; Sánchez, R.; Nörtershäuser, W.

    2015-12-01

    We report on improved isotope shift measurements of the isotopes {}{40,42,{44,48}}Ca in the 4{{s}}{ }2{{{S}}}1/2\\to 4{{p}}{ }2{{{P}}}3/2 (D2) transition using collinear laser spectroscopy. Accurately known isotope shifts in the 4{{s}}{ }2{{{S}}}1/2\\to 4{{p}}{ }2{{{P}}}1/2(D1) transition were used to calibrate the ion beam energy with an uncertainty of {{Δ }}U≈ +/- 0.25 {{V}}. The accuracy in the D2 transition was improved by a factor of 5-10. A King-plot analysis of the two transitions revealed that the field shift factor in the D2 line is about 1.8(13)% larger than in the D1 transition which is ascribed to relativistic contributions of the 4{{{p}}}1/2 wave function.

  10. Inhibition of human pyridoxal kinase by 2-acetyl-4-((1R,2S,3R)-1,2,3,4-tetrahydroxybutyl)imidazole (THI).

    PubMed

    Elsinghorst, Paul W; di Salvo, Martino L; Parroni, Alessia; Contestabile, Roberto

    2015-04-01

    2-Acetyl-4-((1R,2S,3R)-1,2,3,4-tetrahydroxybutyl)imidazole (THI) is observed as a minor contaminant in caramel food colourings (E 150c). Feeding experiments with rodents have revealed a significant lymphopenic effect that has been linked to the presence of THI in these food colourings. Pyridoxal kinase inhibition by THI has been suggested, but not demonstrated, as a mode of action as it leads to lowered levels of pyridoxal-5'-phosphate, which are known to cause lymphopenia. Recently, THI was also shown to inhibit sphingosine-1-phosphate lyase causing comparable immunosuppressive effects and derivatives of THI are being developed for the treatment of rheumatoid arthritis in humans. Interestingly, sphingosine-1-phosphate lyase activity depends on pyridoxal-5'-phosphate, which in turn is provided by pyridoxal kinase. This report shows that THI does inhibit pyridoxal kinase with competitive and mixed-type non-competitive behaviour towards its two substrates, pyridoxal and ATP, respectively. The corresponding inhibition constants are in the low millimolar range. PMID:24899377

  11. A measurement of the electronic widths Γ ee of the ϒ(1 S), ϒ(2 S), and ϒ(4 S) resonances, and of the total decay width Γ of the ϒ(4 S)

    NASA Astrophysics Data System (ADS)

    Albrecht, H.; Hamacher, T.; Hofmann, R. P.; Kirchhoff, T.; Mankel, R.; Nau, A.; Nowak, S.; Reßing, D.; Schröder, H.; Schulz, H. D.; Walter, M.; Wurth, R.; Hast, C.; Kapitza, H.; Kolanoski, H.; Kosche, A.; Lange, A.; Lindner, A.; Schieber, M.; Siegmund, T.; Spaan, B.; Thurn, H.; Töpfer, D.; Wegener, D.; Eckstein, P.; Schmidtler, M.; Schramm, M.; Schubert, K. R.; Schwierz, R.; Waldi, R.; Reim, K.; Wegener, H.; Eckmann, R.; Kuipers, H.; Mai, O.; Mundt, R.; Oest, T.; Reiner, R.; Schmidt-Parzefall, W.; Funk, W.; Stiewe, J.; Werner, S.; Ehret, K.; Hofmann, W.; Hüpper, A.; Knöpfle, K. T.; Spengler, J.; Krieger, P.; Macfarlane, D. B.; Prentice, J. D.; Saull, P. R. B.; Tzamariudaki, K.; van de Water, R. G.; Yoon, T.-S.; Frankl, C.; Schneider, M.; Weseler, S.; Kernel, G.; Križan, P.; Križnič, E.; Podobnik, T.; Živko, T.; Balagura, V.; Barsuk, S.; Belyaev, I.; Chistov, R.; Danilov, M.; Gershtein, L.; Gershtein, Yu.; Golutvin, A.; Korolko, I.; Kostina, G.; Litvintsev, D.; Pakhlov, P.; Semenov, S.; Snizhko, A.; Tichomirov, I.; Zaitsev, Yu.

    1995-12-01

    The partial decay width into electrons, Γ ee , of the ϒ(1 S) and ϒ(2 S) resonances have been measured with the detector ARGUS at the e + e - storage ring DORISII of DESY. Applying the formula of Kuraev and Fadin for the radiative corrections we find: Γ ee (ϒ(1 S))= (1.32±0.04±0.03) keV and Γ ee (ϒ(2 S))=(0.52±0.03±0.01) keV. The total decay width of the ϒ(4 S) resonance and its partial width into electrons have been determined as well. Fitting the data with a generalized Breit-Wigner function with an energy dependent decay width Γ( s) and a mass shift function m(s), we obtain the following resonance parameters: Γ( M 2)=(10.0±2.8±2.7) MeV, Γ ee =(0.28±0.05±0.01)keV and B ee =(2.77±0.50±0.49)·10-5. We argue that the disagrecment of this result with the world average originates from our more adequate parametrization of the observed ϒ(4 S) resonance cross section.

  12. The conserved protein Dre2 uses essential [2Fe-2S] and [4Fe-4S] clusters for its function in cytosolic iron-sulfur protein assembly.

    PubMed

    Netz, Daili J A; Genau, Heide M; Weiler, Benjamin D; Bill, Eckhard; Pierik, Antonio J; Lill, Roland

    2016-07-15

    The cytosolic iron-sulfur (Fe-S) protein assembly (CIA) machinery comprises 11 essential components and matures Fe-S proteins involved in translation and genome maintenance. Maturation is initiated by the electron transfer chain NADPH-diflavin reductase Tah18-Fe-S protein Dre2 that facilitates the de novo assembly of a [4Fe-4S] cluster on the scaffold complex Cfd1-Nbp35. Tah18-Dre2 also play a critical role in the assembly of the diferric tyrosyl radical cofactor of ribonucleotide reductase. Dre2 contains eight conserved cysteine residues as potential co-ordinating ligands for Fe-S clusters but their functional importance and the type of bound clusters is unclear. In the present study, we use a combination of mutagenesis, cell biological and biochemical as well as UV-visible, EPR and Mössbauer spectroscopic approaches to show that the yeast Dre2 cysteine residues Cys(252), Cys(263), Cys(266) and Cys(268) (motif I) bind a [2Fe-2S] cluster, whereas cysteine residues Cys(311), Cys(314), Cys(322) and Cys(325) (motif II) co-ordinate a [4Fe-4S] cluster. All of these residues with the exception of Cys(252) are essential for cell viability, cytosolic Fe-S protein activity and in vivo (55)Fe-S cluster incorporation. The N-terminal methyltransferase-like domain of Dre2 is important for proper Fe-S cluster assembly at motifs I and II, which occurs in an interdependent fashion. Our findings further resolve why recombinant Dre2 from Arabidopsis, Trypanosoma or humans has previously been isolated with a single [2Fe-2S] instead of native [2Fe-2S] plus [4Fe-4S] clusters. In the presence of oxygen, the motif I-bound [2Fe-2S] cluster is labile and the motif II-bound [4Fe-4S] cluster is readily converted into a [2Fe-2S] cluster. PMID:27166425

  13. Hadronic Transitions from Upsilon (2S) to Upsilon (1s) and Upsilon Dipion Transitions at Energies Near the Upsilon (4S)

    NASA Astrophysics Data System (ADS)

    Kotoy, Sergei Anatolievich

    This dissertation consists of two closely related analyses, both of which were performed using data collected with the CLEO II detector at the Cornell Electron Storage Ring. In the first analysis, using the world largest data sample of Υ(2 S) events, we have investigated the hadronic transitions between the Υ(2S) and the Υ(1S), i.e. decays of the Υ(2S) into the Υ(1S), plus a pair of pions ( p+p- or p0p0 ), a single η or a single p0 . The dipion transitions U(2S)-->U( 1S)pp were studied most closely, by using two different techniques: ``exclusive'' and ``inclusive''. In these measurements we determine the U(2S)-->U( 1S)pp branching ratios, and, by combining the exclusive and inclusive results, we derive the Υ(1S), leptonic branching ratios Bee and Bmm . Parameters of the ππ system in the dipion transitions (dipion invariant mass spectra, angular distributions) were analyzed and found to be consistent with current theoretical models. Lastly, we searched for the η and single π0 transitions and obtained upper limits on the branching ratios B(U(2S) -->U(1S)h ) and B(U(2S) -->U(1S)p 0) . In the second analysis, the data collected at the center of mass energies near the Υ(4S) were used to search for the dipion transition between pairs of Υ resonances. As a result of this search, we established upper limits on the branching ratios of the dipion transitions post='par'>p+p- and U(4S)-->U( 1S)p+p- , and measured the cross-sections for the radiative production of Υ(3 S) and Υ(2S) resonances e+e--->U(nS) g at the center of mass energies of Ecm = 10.58 GeV and Ecm = 10.52 GeV.

  14. Electronic, magnetic and structural properties of neutral, cationic and anionic Fe2S2, Fe3S4 and Fe4S4 clusters

    NASA Astrophysics Data System (ADS)

    Tazibt, S.; Bouarab, S.; Ziane, A.; Parlebas, J. C.; Demangeat, C.

    2010-08-01

    This work reports density functional calculations of geometric, electronic and magnetic properties of freestanding iron-sulfur Fe2S2, Fe3S4 and Fe4S4 clusters which are the ones most frequently contained in proteins. We investigate neutral, anionic and cationic clusters using a method that employs linear combinations of atomic orbitals as basis sets, nonlocal norm-conserving pseudopotentials and a generalized gradient approximation to exchange and correlation. The results are discussed in connection with available experimental data. We mainly show that the ground-state geometries of these free clusters are consistent with their structures in core proteins and they are the same in the neutral, anionic and cationic states, but with small distortions. In all cases, an antiferromagnetic order between Fe atoms is always preferred to ferromagnetic and paramagnetic ones. The geometric distortions induced by magnetism decrease with cluster size and the maximum deviation between Fe-Fe distances is 11% in Fe2S2, but only 4% in Fe3S4 and 3% in Fe4S4 clusters.

  15. Energies and spin states of FeS(0/-), FeS2(0/-), Fe2S2(0/-), Fe3S4(0/-), and Fe4S4(0/-) clusters.

    PubMed

    Li, Yan-Ni; Wang, Shengguang; Wang, Tao; Gao, Rui; Geng, Chun-Yu; Li, Yong-Wang; Wang, Jianguo; Jiao, Haijun

    2013-04-15

    The structures and energies of the electronic ground states of the FeS(0/-), FeS2(0/-), Fe2S2(0/-), Fe3S4(0/-), and Fe4S4(0/-) neutral and anionic clusters have been computed systematically with nine computational methods in combination with seven basis sets. The computed adiabatic electronic affinities (AEA) have been compared with available experimental data. Most reasonable agreements between theory and experiment have been found for both hybrid B3LYP and B3PW91 functionals in conjugation with 6-311+G* and QZVP basis sets. Detailed comparisons between the available experimental and computed AEA data at the B3LYP/6-311+G* level identified the electronic ground state of (5)Δ for FeS, (4)Δ for FeS(-), (5)B2 for FeS2, (6)A1 for FeS2(-), (1)A1 for Fe2S2, (8)A' for Fe2S2(-), (5)A'' for Fe3S4, (6)A'' for Fe3S4(-), (1)A1 for Fe4S4, and (1)A2 for Fe4S4(-). In addition, Fe2S2, Fe3S4, Fe3S4(-), Fe4S4, and Fe4S4(-) are antiferromagnetic at the B3LYP/6-311+G* level. The magnetic properties are discussed on the basis of natural bond orbital analysis. PMID:23471871

  16. Synthesis and application of (13)C-labeled 2-acetyl-4-((1R,2S,3R)-1,2,3,4-tetrahydroxybutyl)imidazole (THI), an immunosuppressant observed in caramel food colorings.

    PubMed

    Elsinghorst, Paul W; Raters, Marion; Dingel, Anna; Fischer, Jochen; Matissek, Reinhard

    2013-08-01

    2-Acetyl-4-((1R,2S,3R)-1,2,3,4-tetrahydroxybutyl)imidazole (THI) is a minor toxic contaminant observed in caramel food colorings and was shown to exert immunosuppressant activity when fed to rodents. Because of this toxicity, maximum levels of THI in caramel food colorings have been defined by international and European authorities. Several reports of THI analysis using external standardization have been published for liquid foods such as beers and soft drinks. However, no suitable internal standard has yet been described allowing THI analysis in more complex samples. In this paper we describe the preparation of a labeled [(13)C6]THI analogue and its application for the successful validation of the first stable isotope dilution assay (SIDA) of THI in caramel food colorings. A brief survey of THI levels in commercially available caramel class III (E 150c) and IV (E 150d) food colorings is also included, corroborating that THI occurs only in caramel class III food colorings. PMID:23866086

  17. Enantioselective Synthesis of (2R, 3S)- and (2S, 3R)-4,4,4-trifluoro-N-Fmoc-O-tert-butyl-threonine and their Racemization-free Incorporation into Oligopeptides via Solid-phase Synthesis

    PubMed Central

    Xiao, Nu; Jiang, Zhong-Xing; Yu, Y. Bruce

    2010-01-01

    An efficient method for the enantioselective synthesis of (2R, 3S)- and (2S, 3R)-4,4,4-trifluoro-N-Fmoc-O-tert-butyl-threonine (tfT) on multi-gram scales was developed. Absolute configurations of the two stereoisomers were ascertained by X-ray crystallography. Racemization-free coupling conditions for the incorporation of tfT into oligopeptides were then explored. For solution-phase synthesis, tfT racemization was not an issue under conventional coupling conditions. For solid-phase synthesis, the following conditions were identified to achieve racemization-free synthesis: if tfT (3.0 eq.) was not the first amino acid to be linked to the resin (1.0 eq.), the condition is: 2.7 eq. DIC/3.0 eq. HOBt as the coupling reagent at 0 °C for 20 h; if tfT (3.0 eq.) was the first amino acid to be linked to the resin (1.0 eq.), then 1.0 eq. of CuCl2 needs to be added to the coupling reagent. PMID:17702025

  18. Monothiol Glutaredoxins Can Bind Linear [Fe3S4]+ and [Fe4S4]2+ Clusters in Addition to [Fe2S2]2+ Clusters: Spectroscopic Characterization and Functional Implications

    PubMed Central

    Zhang, Bo; Bandyopadhyay, Sibali; Shakamuri, Priyanka; Naik, Sunil G.; Huynh, Boi Hanh; Couturier, Jérémy; Rouhier, Nicolas; Johnson, Michael K.

    2013-01-01

    Saccharomyces cerevisiae mitochondrial glutaredoxin 5 (Grx5) is the archetypical member of a ubiquitous class of monothiol glutaredoxins with a strictly conserved CGFS active-site sequence that has been shown to function in biological [Fe2S2]2+ cluster trafficking. In this work, we show that recombinant S. cerevisiae Grx5 purified aerobically after prolonged exposure of the cell-free extract to air or after anaerobic reconstitution in the presence of glutathione, predominantly contains a linear [Fe3S4]+ cluster. The excited state electronic properties and ground state electronic and vibrational properties of the linear [Fe3S4]+ cluster have been characterized using UV-visible absorption/CD/MCD, EPR, Mössbauer and resonance Raman spectroscopies. The results reveal a rhombic S = 5/2 linear [Fe3S4]+ cluster with properties similar to those reported for synthetic linear [Fe3S4]+ clusters and the linear [Fe3S4]+ clusters in purple aconitase. Moreover, the results indicate that the Fe-S cluster content previously reported for many monothiol Grxs has been misinterpreted exclusively in terms of [Fe2S2]2+ clusters, rather than linear [Fe3S4]+ clusters or mixtures of linear [Fe3S4]+ and [Fe2S2]2+ clusters. In the absence of GSH, anaerobic reconstitution of Grx5 yields a dimeric form containing one [Fe4S4]2+ cluster that competent for in vitro activation of apo-aconitase, via intact cluster transfer. The ligation of the linear [Fe3S4]+ and [Fe4S4]2+ clusters in Grx5 has been assessed by spectroscopic, mutational and analytical studies. Potential roles for monothiol Grx5 in scavenging and recycling linear [Fe3S4]+ clusters released during protein unfolding under oxidative stress conditions and in maturation of [Fe4S4]2+ cluster-containing proteins are discussed in light of these results. PMID:24032439

  19. (3,3-Difluoro-pyrrolidin-1-yl)-[(2S,4S)-(4-(4-pyrimidin-2-yl-piperazin-1-yl)-pyrrolidin-2-yl]-methanone: A potent, selective, orally active dipeptidyl peptidase IV inhibitor

    SciTech Connect

    Ammirati, Mark J.; Andrews, Kim M.; Boyer, David D.; Brodeur, Anne M.; Danley, Dennis E.; Doran, Shawn D.; Hulin, Bernard; Liu, Shenping; McPherson, R. Kirk; Orena, Stephen J.; Parker, Janice C.; Polivkova, Jana; Qiu, Xiayang; Soglia, Carolyn B.; Treadway, Judith L.; VanVolkenburg, Maria A.; Wilder, Donald C.; Piotrowski, David W.; Pfizer

    2010-10-01

    A series of 4-substituted proline amides was synthesized and evaluated as inhibitors of dipeptidyl pepdidase IV for the treatment of type 2 diabetes. (3,3-Difluoro-pyrrolidin-1-yl)-[(2S,4S)-(4-(4-pyrimidin-2-yl-piperazin-1-yl)-pyrrolidin-2-yl]-methanone (5) emerged as a potent (IC{sub 50} = 13 nM) and selective compound, with high oral bioavailability in preclinical species and low plasma protein binding. Compound 5, PF-00734200, was selected for development as a potential new treatment for type 2 diabetes.

  20. Phase diagrams of the sections As/sub 2/S/sub 3/-Tl/sub 3/AsS/sub 4/, Tl/sub 3/AsS/sub 4/-S, and Tl/sub 3/AsS/sub 4/-Tl/sub 2/S of the ternary system As-Tl-S

    SciTech Connect

    Vorob'ev, Yu.I.; Velikova, N.G.; Kirilenko, V.V.; Shchelokov, R.N.

    1987-12-01

    Using DTA and XPA methods, microstructural investigations, and microhardness measurements, phase diagrams of the quasibinary sections As/sub 2/S/sub 3/-Tl/sub 3/AsS/sub 4/, Tl/sub 3/AsS/sub 4/-S, and Tl/sub 3/AsS/sub 4/-Tl/sub 2/S, are characterized by five ternary compounds Tl/sub 3/As/sub 5/S/sub 10/, Tl/sub 9/As/sub 5/S/sub 15/, Tl/sub 9/As/sub 3/S/sub 13/, Tl/sub 3/AsS/sub 6/, and Tl/sub 8/As/sub 2/S/sub 9/, which decompose by peritectic reactions at 198, 307, 408, 362, and 318/degree/C, respectively. Interplanar spacings and line intensities are given for the detected compounds. Glass formation is considered in the Tl-As-S system.

  1. Redetermination of bis-{(1S,2S,4S,5R)-2-[(R)-hy-droxy(6-meth-oxy-4-quinol-yl)meth-yl]-5-vinyl-quinuclidinium} sulfate dihydrate.

    PubMed

    Mangwala Kimpende, Peter; Van Meervelt, Luc

    2010-01-01

    The structure of the title compound, known as quinine sulfate dihydrate, 2C(20)H(25)N(2)O(2) (+)·SO(4) (2-)·2H(2)O, was previously reported by Mendel [Proc. K. Ned. Akad. Wet. (1955), 58, 132-134], but only the [010] projection was determined. Hence, we have redetermined its crystal structure at 100 K using three-dimensional data. The asymmetric unit consists of a quininium cation, viz. (R)-(6-meth-oxy-quinolinium-4-yl)[(1S,2S,4S,5R)-5-vinyl-quinuclid-in-ium-2-yl]methanol, one half of a sulfate anion and a water mol-ecule. The S atom occupies a special position on a twofold axis. The packing is characterized by infinite columns, consisting of sulfate anions and water mol-ecules, linked through hydrogen bonds along the b axis, and further stabilized by hydrogen bonds to quininium cations. The quininium cations inter-act further through C-H⋯O and C-H⋯π inter-actions. PMID:21588765

  2. State-to-state quantum dynamics of the N(4S) + H2(X1Σ+) → NH(X3Σ-) + H(2S) reaction and its reaction mechanism analysis

    NASA Astrophysics Data System (ADS)

    Zhang, Jing; Gao, Shou-Bao; Wu, Hui; Meng, Qing-Tian

    2015-08-01

    Quantum state-to-state dynamics of the N(4S) + H2 (X1Σ+) → NH(X3Σ-) + H(2S) reaction is reported in an accurate novel potential energy surface constructed by Zhai et al. (2011 J. Chem. Phys. 135 104314). The time-dependent wave packet method, which is implemented on graphics processing units, is used to calculate the differential cross sections. The influences of the collision energy on the product state-resolved integral cross sections and total differential cross sections are calculated and discussed. It is found that the products NH are predominated by the backward scattering due to the small impact parameter collisions, with only minor components being forward and sideways scattered, and have an inverted rotational distribution and no inversion in vibrational distributions; both rebound and stripping mechanisms exist in the case of high collision energies. Project supported by the National Natural Science Foundation of China (Grant No. 11074151) and the Natural Science Foundation of Shandong Province, China (Grant No. ZR2014AM022).

  3. Effects of collision energy and rotational quantum number on stereodynamics of the reactions: H(2S) + NH( υ = 0, j = 0, 2, 5, 10)→N(4S) + H2

    NASA Astrophysics Data System (ADS)

    Wang, Wei; Yu, Yong-Jiang; Zhao, Gang; Yang, Chuan-Lu

    2016-08-01

    The stereodynamical properties of H(2S) + NH(v = 0, j = 0, 2, 5, 10) → N(4S) + H2 reactions are studied in this paper by using the quasi-classical trajectory (QCT) method with different collision energies on the double many-body expansion (DMBE) potential energy surface (PES) (Poveda L A and Varandas A J C 2005 Phys. Chem. Chem. Phys. 7 2867). In a range of collision energy from 2 to 20 kcal/mol, the vibrational rotational quantum numbers of the NH molecules are specifically investigated on v = 0 and j = 0, 2, 5, 10 respectively. The distributions of P(θ r ), P(ϕ r ), P(θ r ,ϕ r ), (2π/σ)(dσ 00/dω t ) differential cross-section (DCSs) and integral cross-sections(ICSs) are calculated. The ICSs, computed for collision energies from 2 kcal/mol to 20 kcal/mol, for the ground state are in good agreement with the cited data. The results show that the reagent rotational quantum number and initial collision energy both have a significant effect on the distributions of the k – j ‧, the k – k ‧– j ‧, and the k – k ‧ correlations. In addition, the DCS is found to be susceptible to collision energy, but it is not significantly affected by the rotational excitation of reagent. Project supported by the Natural Science Foundation of Shandong Province, China (Grant No. 2016ZRB01066) and the University Student’s Science and Technology Innovation Fund of Ludong University, China (Grant No. 131007).

  4. Experimental and theoretical investigations of the reactions NH(X {sup 3}{sigma}{sup -})+D({sup 2}S){yields}ND(X {sup 3}{sigma}{sup -})+H({sup 2}S) and NH(X {sup 3}{sigma}{sup -})+D({sup 2}S){yields}N({sup 4}S)+HD(X {sup 1}{sigma}{sub g}{sup +})

    SciTech Connect

    Qu, Z.-W.; Zhu, H.; Schinke, R.; Adam, L.; Hack, W.

    2005-05-22

    The rate coefficient of the reaction NH(X {sup 3}{sigma}{sup -})+D({sup 2}S){yields}{sup k{sub 1}}products (1) is determined in a quasistatic laser-flash photolysis, laser-induced fluorescence system at low pressures. The NH(X) radicals are produced by quenching of NH(a {sup 1}{delta}) (obtained in the photolysis of HN{sub 3}) with Xe and the D atoms are generated in a D{sub 2}/He microwave discharge. The NH(X) concentration profile is measured in the presence of a large excess of D atoms. The room-temperature rate coefficient is determined to be k{sub 1}=(3.9{+-}1.5)x10{sup 13} cm{sup 3} mol{sup -1} s{sup -1}. The rate coefficient k{sub 1} is the sum of the two rate coefficients, k{sub 1a} and k{sub 1b}, which correspond to the reactions NH(X {sup 3}{sigma}{sup -})+D({sup 2}S){yields}{sup k{sub 1a}}ND(X {sup 3}{sigma}{sup -})+H({sup 2}S) (1a) and NH(X {sup 3}{sigma}{sup -})+D({sup 2}S){yields}{sup k{sub 1b}}N({sup 4}S)+HD(X {sup 1}{sigma}{sub g}{sup +}) (1b), respectively. The first reaction proceeds via the {sup 2}A{sup ''} ground state of NH{sub 2} whereas the second one proceeds in the {sup 4}A{sup ''} state. A global potential energy surface is constructed for the {sup 2}A{sup ''} state using the internally contracted multireference configuration interaction method and the augmented correlation consistent polarized valence quadrupte zeta atomic basis. This potential energy surface is used in classical trajectory calculations to determine k{sub 1a}. Similar trajectory calculations are performed for reaction (1b) employing a previously calculated potential for the {sup 4}A{sup ''} state. The calculated room-temperature rate coefficient is k{sub 1}=4.1x10{sup 13} cm{sup 3} mol{sup -1} s{sup -1} with k{sub 1a}=4.0x10{sup 13} cm{sup 3} mol{sup -1} s{sup -1} and k{sub 1b}=9.1x10{sup 11} cm{sup 3} mol{sup -1} s{sup -1}. The theoretically determined k{sub 1} shows a very weak positive temperature dependence in the range 250{<=}T/K{<=}1000. Despite the deep potential

  5. Crystal structure of racemic [(1R,2S,3R,4S,6S)-2,6-bis­(furan-2-yl)-4-hy­droxy-4-(thio­phen-2-yl)cyclo­hexane-1,3-di­yl]bis­(thio­phen-2-yl­methanone)

    PubMed Central

    Çelik, Ísmail; Ersanlı, Cem Cüneyt; Akkurt, Mehmet; Gezegen, Hayrettin; Köseoğlu, Rahmi

    2016-01-01

    In the title compound, C28H22O5S3, the central cyclo­hexane ring adopts a chair conformation. The atoms of the furan ring attached to the 6-position of the central cyclo­hexane ring are disordered over two sets of sites with occupancies of 0.832 (5) and 0.168 (5). The hy­droxy group is disordered over two positions (at the 4- and 6-positions of the cyclo­hexane ring) in the ratio 0.832 (5):0.168 (5). In the crystal, mol­ecules are linked by C—H⋯O hydrogen bonds and C—H⋯π inter­actions, forming layers parallel to (100). PMID:27555944

  6. Charge transfer salts of benzene-bridged 1,2,3,5-dithiadiazolyl diradicals. Preparation, structures, and transport properties of 1,3- and 1,4-[(S{sub 2}N{sub 2}C)C{sub 6}H{sub 4}(CN{sub 2}S{sub 2})] [X] (X = I, Br)

    SciTech Connect

    Bryan, C.D.; Cordes, A.W.; Fleming, R.M.; Glarum, S.H.; Haddon, R.C.; Palstra, T.T.M.; Perel, A.S.; George, N.A.; MacKinnon, C.D.; Oakley, R.T.

    1995-07-05

    Cosublimation of 1,3- and 1,4-benzene-bis(l,2,3,5-dithiadiazolyl) and iodine/bromine affords crystals of the mixed valence salts 1,3- and 1,4-[(S{sub 2}N{sub 2}C)C{sub 6}H{sub 4}(CN{sub 2}S2)][X] (X = I, Br). The crystal structures of the two iodide salts consist of perfectly superimposed stacks of molecular units with interannular spacing along the stacks of 3.487(3) and 3.415(2) A for the 1,3- and 1,4-derivatives. In both compounds the iodines are disordered along the stacking direction. The 1,3-derivative has a highly one-dimensional structure; there are no short intercolumnar S-S interactions. In the 1,4-derivative, however, lateral S-S contacts of 3.911 A afford some measure of three-dimensionality. The bromide salt of the 1,4-derivative consists of ribbons of alternating 1,4-[(S{sub 2}N{sub 2}C)C{sub 6}H{sub 4}(CN{sub 2}S{sub 2})]{sup +} units and bromide ions. Magnetic susceptibility and conductivity measurements on the two iodide salts indicate weakly metallic behavior at room temperature, with a charge density wave (CDW) driven metal-insulator phase transition occurring near 270 and 190 K for the 1,3- and 1,4-derivatives, respectively. For the 1,4-derivative, analysis of the CDW wavevector associated with the transition affords a degree of charge transfer of 1/4 of electron per radical. 34 refs., 14 figs., 3 tabs.

  7. Stereoselective cathodic synthesis of 8-substituted (1R,3R,4S)-menthylamines

    PubMed Central

    Edinger, Carolin; Kulisch, Jörn

    2015-01-01

    Summary The electrochemical generation of menthylamines from the corresponding menthone oximes equipped with an additional substituent in position 8 is described. Due to 1,3-diaxial interactions a pronounced diastereoselectivity for the menthylamines is found. PMID:25815083

  8. The hydrogen permeability of Pd{sub 4}S

    SciTech Connect

    O'Brien, Casey; Miller, James; Gellman, Andrew; Morreale, Bryan

    2011-04-01

    Hydrogen permeates rapidly through pure Pd membranes, but H{sub 2}S, a common minor component in hydrogen-containing streams, produces a Pd{sub 4}S film on the Pd surface that severely retards hydrogen permeation. Hydrogen still permeates through the bi-layered Pd{sub 4}S/Pd structure, indicating that the Pd{sub 4}S surface is active for H{sub 2} dissociation; the low hydrogen permeability of the Pd4S film is responsible for the decreased rate of hydrogen transport. In this work, the hydrogen permeability of Pd{sub 4}S was determined experimentally in the 623-773 K temperature range. Bi-layered Pd{sub 4}S/Pd foils were produced by exposing pure Pd foils to H{sub 2}S. H{sub 2} fluxes through the bi-layered Pd{sub 4}S/Pd foils were measured during exposure to both pure H{sub 2} and a 1000 ppm H{sub 2}S in H{sub 2} gas mixture. Our results show that H{sub 2}S slows hydrogen permeation through Pd mainly by producing a Pd{sub 4}S film on the Pd surface that is roughly an order-of-magnitude less permeable to hydrogen (k{sub Pd{sub 4}S} = 10{sup −7.5} exp(−0.22 eV/k{sub B}T) molH{sub 2}/m/s/Pa{sup 1/2}) than pure Pd. The presence of H{sub 2}S in the gas stream results in greater inhibition of hydrogen transport than can be explained by the very low permeability of Pd{sub 4}S. H{sub 2}S may block H2 dissociation sites at the Pd{sub 4}S surface.

  9. CP3R: An Important Tool.

    PubMed

    Clark, Danette; Clark, Danillie

    2016-01-01

    The Web-based Cancer Program Practice Profile Reports (CP3R) offer providers comparative information to assess adherence to and consideration of standard-of-care therapies for major cancers. The tool helps facilities practice continuous improvement to ensure quality of patient care. The poster will illustrate a process to ensure the presentation of data at a compliance level. PMID:27556847

  10. Internally consistent database for sulfides and sulfosalts in the system Ag 2S-Cu 2S-ZnS-Sb 2S 3-As 2S 3

    NASA Astrophysics Data System (ADS)

    Sack, Richard O.

    2000-11-01

    An updated thermodynamic database for Ag 2S-Cu 2S-ZnS-Sb 2S 3-As 2S 3 sulfides and sulfosalts applicable to temperatures above 119°C is developed to calculate phase relations for polybasite-pearceite- and fahlore-bearing assemblages. It is based on pre-existing and new constraints on activity-composition, Ag-Cu and As-Sb partitioning, and other relations, and on experiments (200-300°C, evacuated silica tubes) conducted to define the stability of the polybasite-pearceite [(Ag 1- x,Cu x) 16(Sb 1- y,As y) 2S 11] + ZnS sphalerite assemblage with respect to assemblages containing (Ag,Cu) 2S sulfides coexisting with (Cu, Ag) 10Zn 2(Sb,As) 4S 13 fahlore sulfosalts. It was found that the thermodynamics of mixing of bcc- and hcp-(Ag,Cu) 2S solutions, which are fast-ion conductors, may be described by using site multiplicities of metals α Ag,Cu > 2 and temperature-dependent regular solution parameters. We obtained estimates for the Gibbs energies of formation for Ag 16Sb 2S 11 and Cu 16Sb 2S 11 polybasite endmembers from the simple sulfides (Ag 2S, Cu 2S, and Sb 2S 3) of -30.79 and -4.07 kJ/gfw at 200°C, and -32.04 and -0.59 kJ/gfw at 400°C, respectively, that are about one half kJ/gfw more positive and about 6 kJ/gfw more negative than those estimated by Harlov and Sack (1995b). The corresponding estimates for formation energies of Ag 10Zn 2Sb 4S 13 and Cu 10Zn 2Sb 4S 13 fahlores (-20.29 and -105.29 kJ/gfw at 200°C and -23.72 and -105.76 kJ/gfw at 400°C) are comparable to, and roughly 110 kJ/gfw more positive than, the corresponding estimates of Ebel and Sack (1994). We also determined that the Gibbs energies of the As-Sb exchange reactions: 1/4Ag 10Zn2Sb4S13+1/2Ag 16As2S11=1/2Ag 16Sb2S11+1/4Ag 10Zn2As4S13Sb-fahlorepearceitepolybasiteAs-fahlore and Ag3SbS3+1/2Ag 16As2S11=1/2Ag 16Sb2S11+Ag3AsS3pyrargyritepearceitepolybasiteproustite are, respectively, 8.75 and 0.40 kJ/gfw in the range 150-350°C, and these predictions are consistent with As-Sb partitioning relations

  11. Metamodels for Planar 3R Workspace Optimization.

    SciTech Connect

    Turner, C. J.

    2002-01-01

    Robotic workspace optimization is a central element of robot system design. To formulate the optimization problem, the complex relationships between design variables, tuning parameters, and performance indices need to be accurately and efficiently represented. The nature of the relationships suggests that metamodels, or models of the models, should be used to derive suitable objective functions. A comparison of two metamodeling techniques for robotic workspace optimization problems for several trial cases suggests that non-uniform rational B-spline models, derived from computer graphics and computer-aided design techniques, are as suitable as response surface models to solve planar 3R workspace optimization problems. Promising nonlinear modeling results with B-spline models suggest future work is justified and performance gains can be realized.

  12. The 3R polymorph of CaSi{sub 2}

    SciTech Connect

    Nedumkandathil, Reji; Benson, Daryn E.; Grins, Jekabs; Spektor, Kristina; Häussermann, Ulrich

    2015-02-15

    The Zintl phase CaSi{sub 2} commonly occurs in the 6R structure where puckered hexagon layers of Si atoms are stacked in an AA′BB′CC′ fashion. In this study we show that sintering of CaSi{sub 2} in a hydrogen atmosphere (30 bar) at temperatures between 200 and 700 °C transforms 6R-CaSi{sub 2} quantitatively into 3R-CaSi{sub 2}. In the 3R polymorph (space group R-3m (no. 166), a=3.8284(1), c=15.8966(4), Z=3) puckered hexagon layers are stacked in an ABC fashion. The volume per formula unit is about 3% larger compared to 6R-CaSi{sub 2}. First principles density functional calculations reveal that 6R and 3R-CaSi{sub 2} are energetically degenerate at zero Kelvin. With increasing temperature 6R-CaSi{sub 2} stabilizes over 3R because of its higher entropy. This suggests that 3R-CaSi{sub 2} should revert to 6R at elevated temperatures, which however is not observed up to 800 °C. 3R-CaSi{sub 2} may be stabilized by small amounts of incorporated hydrogen and/or defects. - Graphical abstract: The common 6R form of CaSi{sub 2} can be transformed quantitatively into 3R-CaSi{sub 2} upon sintering in a hydrogen atmosphere. - Highlights: • Quantitative and reproducible bulk synthesis of the rare 3R polymorph of CaSi{sub 2}. • Clarification of the energetic relation between 3R and conventional 6R form. • 3R-CaSi{sub 2} is presumably stabilized by small amounts of incorporated hydrogen and/or defects.

  13. Crystal structure of (2S/2R,3S/3R)-3-hydroxy-2-phenyl-chroman-4-one.

    PubMed

    Belguedj, Roumaissa; Bouacida, Sofiane; Merazig, Hocine; Chibani, Aissa; Bouraiou, Abdelmalek

    2015-02-01

    In the title mol-ecule, C15H12O3, the C atoms bearing the hy-droxy group and the phenyl ring are disordered over two sets of sites with refined occupancies of 0.573 (7) and 0.427 (7). There is also disorder of the phenyl ring but the hy-droxy group was refined as ordered. The dihedral angles between the benzene ring of the chromane ring system and the phenyl ring are 89.7 (2)° for the major component of disorder and 72.1 (3)° for the minor component. Both disorder components of the the di-hydro-pyran ring are in a half-chair conformation. In the crystal, mol-ecules are linked by pairs of O-H⋯O hydrogen bonds, forming inversion dimers with an R 2 (2)(10) graph-set motif. Weak C-H⋯π inter-actions link these dimers into ladders along [001]. PMID:25878868

  14. Antiausterity activity of arctigenin enantiomers: importance of (2R,3R)-absolute configuration.

    PubMed

    Awale, Suresh; Kato, Mamoru; Dibwe, Dya Fita; Li, Feng; Miyoshi, Chika; Esumi, Hiroyasu; Kadota, Shigetoshi; Tezuka, Yasuhiro

    2014-01-01

    From a MeOH extract of powdered roots of Wikstroemia indica, six dibenzyl-gamma-butyrolactone-type lignans with (2S,3S)-absolute configuration [(+)-arctigenin (1), (+)-matairesinol (2), (+)-trachelogenin (3), (+)-nortrachelogenin (4), (+)-hinokinin (5), and (+)-kusunokinin (6)] were isolated, whereas three dibenzyl-gamma-butyrolactone-type lignans with (2R,3R)-absolute configuration [(-)-arctigenin (1*), (-)-matairesinol (2*), (-)-trachelogenin (3*)] were isolated from Trachelospermum asiaticum. The in vitro preferential cytotoxic activity of the nine compounds was evaluated against human pancreatic PANC-1 cancer cells in nutrient-deprived medium (NDM), but none of the six lignans (1-6) with (2S,3S)-absolute configuration showed preferential cytotoxicity. On the other hand, three lignans (1*-3*) with (2R,3R)-absolute configuration exhibited preferential cytotoxicity in a concentration-dependent manner with PC50 values of 0.54, 6.82, and 5.85 microM, respectively. Furthermore, the effect of (-)- and (+)-arctigenin was evaluated against the activation of Akt, which is a key process in the tolerance to nutrition starvation. Interestingly, only (-)-arctigenin (1*) strongly suppressed the activation of Akt. These results indicate that the (2R,3R)-absolute configuration of (-)-enantiomers should be required for the preferential cytotoxicity through the inhibition of Akt activation. PMID:24660468

  15. The Italian stroke-app: ICTUS3R.

    PubMed

    Baldereschi, Marzia; Di Carlo, Antonio; Piccardi, Benedetta; Inzitari, Domenico

    2016-06-01

    Any strategy to reduce stroke burden involves crucial inputs from individuals (risk reduction, rapid recognition and response to symptoms onset) which imply a certain level of stroke knowledge. Health-related applications (apps) have been identified as a novel platform for dissemination of health information to the public. Only few apps about stroke are currently available with scientifically valid information, none of them are available in Italian. We developed the first and only Italian stroke app, ICTUS3R. We also pilot tested ICTUS3R in terms of its usage during the first 12 months following release (October 30, 2014). ICTUS3R was developed in collaboration with communication experts, stroke leaders and web producers. ICTUS3R was pilot tested in terms of number and distribution of downloads. Data about 1 year usage were anonymously collected from ICTUS 3R release on October 30, 2014. ICTUS3R includes a stroke screening tool, information how to react in case of suspected stroke, and information about risk factors including personal stroke risk calculator. ICTUS 3R web site was visited 36,242 times. Mean session duration was over 2 min. The 48 % of downloads were by individuals aged 25-44 years, 12 % by individuals ≥55 years. ICTUS3R downloads were distributed across all the Italian provinces, in varying proportions. The 4.3 % of downloads were done outside Italy. ICTUS3R can be an important contribution to stroke management and prevention, it proved to be well received for dissemination of stroke information among Italians. Its use could contribute to reduce stroke burden in Italy. PMID:26897019

  16. J-2S rocket engine

    NASA Astrophysics Data System (ADS)

    Vilja, J. O.; Briley, G. L.; Murphy, T. H.

    1993-06-01

    The principal design characteristics and features of the J-2S rocket engine, developed as a simpler and more robust version of the J-2 engine, are described. The J-2S is a 265,000-lb vacuum thrust engine that delivers 436 sec vacuum thrust with a nozzle expansion ratio of 40 and operates at a chamber pressure of 1,200 psi. The most unique feature of the J-2S is that it incorporates a main chamber tap-off cycle which eliminates the need for a gas generator. Another simplification for the J-2S is the adoption of a centrifugal fuel turbopump to replace the J-2's axial turbopump. A schematic of the J-2S, engine test results, and performance options are presented.

  17. Buck-Buck- Boost Regulatr (B3R)

    NASA Astrophysics Data System (ADS)

    Mourra, Olivier; Fernandez, Arturo; Landstroem, Sven; Tonicello, Ferdinando

    2011-10-01

    In a satellite, the main function of a Power Conditioning Unit (PCU) is to manage the energy coming from several power sources (usually solar arrays and battery) and to deliver it continuously to the users in an appropriate form during the overall mission. The objective of this paper is to present an electronic switching DC-DC converter called Buck-Buck-Boost Regulator (B3R) that could be used as a modular and recurrent solution in a PCU for regulated or un- regulated 28Vsatellite power bus classes. The power conversion stages of the B3R topology are first described. Then theoretical equations and practical tests illustrate how the converter operates in term of power conversion, control loops performances and efficiency. The paper finally provides some examples of single point failure tolerant implementation using the B3R.

  18. Coupling Algorithm for Sp (3 , R) Irreducible Representations

    NASA Astrophysics Data System (ADS)

    St Germaine-Fuller, James; McCoy, Anna; Caprio, Mark

    2014-09-01

    The nuclear symplectic model based on Sp (3 , R) - the smallest algebra that contains both the shell model Hamiltonian and the rotor algebra - connects the microscopic shell model to collective rotational behavior and naturally extends the Elliot SU (3) model to multiple shells. However, Sp (3 , R) is only an approximate symmetry of the nucleus, where the symmetry can be broken by spin-orbit interactions, tensor force interactions, and pairing. The Hamiltonians in most physical situations will the break Sp (3 , R) symmetry, causing their eigenstates to become linear combinations of symplectic irreducible representations (irreps). Calculations with those eigenstates will then involve multiple irreps. We report a computer algorithm for coupling symplectic irreps that should assist in performing such multi-irrep calculations and facilitate computing symplectic coupling coefficients. The nuclear symplectic model based on Sp (3 , R) - the smallest algebra that contains both the shell model Hamiltonian and the rotor algebra - connects the microscopic shell model to collective rotational behavior and naturally extends the Elliot SU (3) model to multiple shells. However, Sp (3 , R) is only an approximate symmetry of the nucleus, where the symmetry can be broken by spin-orbit interactions, tensor force interactions, and pairing. The Hamiltonians in most physical situations will the break Sp (3 , R) symmetry, causing their eigenstates to become linear combinations of symplectic irreducible representations (irreps). Calculations with those eigenstates will then involve multiple irreps. We report a computer algorithm for coupling symplectic irreps that should assist in performing such multi-irrep calculations and facilitate computing symplectic coupling coefficients. Supported by the US NSF under Grant NSF-PHY05-52843, the US DOE under Grant DE-FG02-95ER-40934, and the Research Corporation for Science Advancement under a Cottrell Scholar Award.

  19. Coupling Algorithm for Sp(3 , R) Irreducible Representations

    NASA Astrophysics Data System (ADS)

    St. Germaine-Fuller, James F.; McCoy, Anna E.; Caprio, Mark A.

    2015-04-01

    The nuclear symplectic model based on Sp(3 , R) - the smallest algebra that contains both the shell model Hamiltonian and the rotor algebra - connects the microscopic shell model to collective rotational behavior and naturally extends the Elliot SU(3) model to multiple shells. However, Sp(3 , R) is only an approximate symmetry of the nucleus which can be broken by spin-orbit interactions, tensor force interactions, and pairing. The Hamiltonians in most physical situations will break Sp(3 , R) symmetry, causing their eigenstates to become linear combinations of symplectic irreducible representations (irreps). Calculations with those eigenstates will then involve multiple irreps. We report a computer algorithm for enumerating the irreps that arise from the coupling of two symplectice irreps and evaluating their multiplicities in the product. This should assist in performing such multi-irrep calculations and facilitate computing symplectic coupling coefficients. Supported by the US NSF under Grant NSF-PHY05-52843, the US DOE under Grant DE-FG02-95ER-40934, and the Research Corporation for Science Advancement under a Cottrell Scholar Award.

  20. Observation of $\\Upsilon(4S) decays to$\\pi^+pi^-\\Upsilon(1S)$ and $\\pi^+pi^-\\Upsilon(1S)$

    SciTech Connect

    Aubert, B.

    2006-04-19

    The authors present the first measurement of {Upsilon}(4S) decays to {pi}{sup +}{pi}{sup -} {Upsilon}(1S) and {pi}{sup +}{pi}{sup -} {Upsilon}(2S) based on a sample of 230 x 10{sup 6} {Upsilon}(4S) mesons collected with the BABAR detector. They measure the product branching fractions {Beta}({Upsilon}(4S) {yields} {pi}{sup +}{pi}{sup -} {Upsilon}(1S)) x {Beta}({Upsilon}(1S) {yields} {mu}{sup +}{mu}{sup -}) = (2.23 {+-} 0.25{sub stat} {+-} 0.27{sub sys}) x 10{sup -6} and {Beta}({Upsilon}(4S) {yields} {pi}{sup +}{pi}{sup -}{Upsilon}(2S)) x {Beta}({Upsilon}(2S) {yields} {mu}{sup +}{mu}{sup -}) = (1.69 {+-} 0.26{sub stat} {+-} 0.20{sub sys}) x 10{sup -6}, from which they derive the partial widths {Lambda}({Upsilon}(4S) {yields} {pi}{sup +}{pi}{sup -} {Upsilon}(1S)) = (1.8 {+-} 0.4) keV and {Lambda}({Upsilon}(4S) {yields} {pi}{sup +}{pi}{sup -}{Upsilon}(2S)) = (2.7 {+-} 0.8) keV.

  1. Internally consistent database for sulfides and sulfosalts in the system Ag 2S-Cu 2S-ZnS-FeS-Sb 2S 3-As 2S 3: Update

    NASA Astrophysics Data System (ADS)

    Sack, Richard O.

    2005-03-01

    The thermodynamic database for Ag 2S-Cu 2S-ZnS-FeS-Sb 2S 3-As 2S 3 sulfides and sulfosalts applicable to temperatures above 119°C has been updated based on the results of recent petrologic, experimental, and theoretical studies. Solution and end-member properties of fahlore [˜(Ag,Cu) 10(Fe,Zn) 2(Sb,As) 4S 13] have been adjusted to allow for (1) revisions of the description of Fe-Zn partitioning with sphalerite that incorporate sphalerite activity-composition relations derived from the cluster variation method (CVM) model of a previous study, (2) the assumption that the miscibility gaps observed in high-Ag fahlores from the Husky Mine (Yukon, Canada) approximate a temperature of 170°C, and (3) an increase in the Ag-Cu partitioning between fahlore and polybasite (Ag,Cu) 16(Sb,As) 2S 11 required to reproduce compositions of fahlore in the polybasite + Sb-fahlore + ZnS sphalerite assemblage reported in previous experimental studies. The resulting minor parameter adjustments produce a database that demonstrably reproduces the composition data reported for a wide-range of sulfide ore deposits. They result in revised estimates for the Gibbs energies of formation of end-member fahlore components from the simple sulfides that, except for Cu 10Zn 2Sb 4S 13, are less temperature dependent than those previously inferred (at 200 and 400°C: -23.27 and -24.84 kJ/gfw for Ag 10Zn 2Sb 4S 13, -115.18 and -116.57 kJ/gfw for Cu 10Zn 2Sb 4S 13, -85.14 and -75.20 kJ/gfw for Cu 10Fe 2Sb 4S 13, and -3.81 and 9.10 kJ/gfw for Ag 10Fe 2Sb 4S 13). The database is extended to PbS-bearing supersystems containing the galena + fahlore + sphalerite assemblage. Predicted initial Ag-contents of galena calculated from this database agree with those inferred from petrological studies of Ag-Pb-Zn ores from the Coeur d'Alene district, Idaho, USA and Julcani, Peru.

  2. Cs8[Fe4S10] and Cs7[Fe4S8], two new sulfido ferrates with different tetrameric anions.

    PubMed

    Schwarz, Michael; Röhr, Caroline

    2015-02-01

    The two new cesium sulfido ferrates Cs(8)[Fe(4)S(10)] and Cs(7)[Fe(4)S(8)] were synthesized at a maximum temperature of 1070 K in corundum crucibles from stoichiometric samples containing elemental Fe and S together with cesium disulfide, Cs(2)S(2). Their crystal structures have been determined by means of single-crystal X-ray diffraction. Cs(8)[Fe(III)(4)S(10)] crystallizes in the triclinic Cs(6)[Ga(4)Se(10)]-type structure and is thus isotypic to the corresponding rubidium salt. The structure exhibits tetramers [Fe(4)S(10)](8-) of edge-sharing tetrahedra, which represent segments of the well-known chain compounds A[FeS(2)]. The monoclinic mixed-valent iron(II/III) sulfido ferrate Cs(7)[Fe(4)S(8)], which is isotypic to the cesium tellurido ferrate, likewise contains oligomeric tetramers of four edge-sharing [FeS(4)] tetrahedra, in this case resulting in only slightly distorted tetrahedral [Fe(4)S(8)](7-) anions with a Fe(4)S(4) cubane core resembling the prominent [Fe(4)(μ(3)-S(4))](+) cluster, e.g., in the active site of ferredoxins. These sulfido ferrate anions are surrounded by 26 Cs cations, which are located at the 8 corners, 6 faces, and 12 edges of a cube. A dense stacking of these cubes, which ultimately results in the overall seven cesium countercations per cluster anion, describes the overall crystal structure completely. According to this arrangement of cluster-centered cubes, a relationship of the packing of Cs cations and cluster anions with the simple cubic packing (α-Po-type structure) can be established by applying the crystallographic group-subgroup formalism. FP-LAPW band-structure calculations applying antiferromagnetic spin ordering of the high-spin Fe ions in the two tetramers predict a small band gap of 1 eV associated with a L → M-CT for Cs(8)[Fe(III)(4)S(10)] and a tiny energy gap of 0.1 eV resulting from a d-d transition for the mixed-valent cluster compound Cs(7)[Fe(II/III)(4)S(8)]. PMID:25514465

  3. CARM1 Preferentially Methylates H3R17 over H3R26 through a Random Kinetic Mechanism.

    PubMed

    Jacques, Suzanne L; Aquino, Katrina P; Gureasko, Jodi; Boriack-Sjodin, P Ann; Porter Scott, Margaret; Copeland, Robert A; Riera, Thomas V

    2016-03-22

    CARM1 is a type I arginine methyltransferase involved in the regulation of transcription, pre-mRNA splicing, cell cycle progression, and the DNA damage response. CARM1 overexpression has been implicated in breast, prostate, and liver cancers and therefore is an attractive target for cancer therapy. To date, little about the kinetic properties of CARM1 is known. In this study, substrate specificity and the kinetic mechanism of the human enzyme were determined. Substrate specificity was examined by testing CARM1 activity with several histone H3-based peptides in a radiometric assay. Comparison of kcat/KM values reveals that methylation of H3R17 is preferred over that of H3R26. These effects are KM-driven as kcat values remain relatively constant for the peptides tested. Shortening the peptide at the C-terminus by five amino acid residues greatly reduced binding affinity, indicating distal residues may contribute to substrate binding. CARM1 appears to bind monomethylated peptides with an affinity similar to that of unmethylated peptides. Monitoring of the CARM1-dependent production of monomethylated and dimethylated peptides over time by self-assembled monolayer and matrix-assisted laser desorption ionization mass spectrometry revealed that methylation by CARM1 is distributive. Additionally, dead-end and product inhibition studies suggest CARM1 conforms to a random sequential kinetic mechanism. By defining the kinetic properties and mechanism of CARM1, these studies may aid in the development of small molecule CARM1 inhibitors. PMID:26848779

  4. Lipase-catalyzed resolution of (2R*,3S*)- and (2R*,3R*)-3-methyl-3-phenyl-2-aziridinemethanol at low temperatures and determination of the absolute configurations of the four stereoisomers.

    PubMed

    Sakai, Takashi; Liu, Yu; Ohta, Hiroshi; Korenaga, Toshinobu; Ema, Tadashi

    2005-02-18

    [reaction: see text] Lipase-catalyzed resolution of (2R*,3S*)-3-methyl-3-phenyl-2-aziridinemethanol, (+/-)-2, at low temperatures gave synthetically useful (2R,3S)-2 and its acetate (2S,3R)-2a with (2S)-selectivity (E = 55 at -40 degrees C), while a similar reaction of (2R*,3R*)-3-methyl-3-phenyl-2-aziridinemethanol, (+/-)-3, gave (2S,3S)-3 and its acetate (2R,3R)-3a with (2R)-selectivity (E = 73 at -20 degrees C). Compound (+/-)-2 was prepared conveniently via diastereoselective addition of MeMgBr to tert-butyl 3-phenyl-2H-azirine-2-carboxylate, (+/-)-1a, which was successfully prepared by the Neber reaction of oxime tosylate of tert-butyl benzoyl acetate 7a. The tert-butyl ester was requisite to promote this reaction. For determination of the absolute configuration of (2S,3R)-2a, enantiopure (2S,3R)-2 was independently prepared in three steps involving diastereoselective methylation of 3-phenyl-2H-azirine-2-methanol, (S)-10, with MeMgBr. The absolute configuration of (2S,3S)-3 was determined by X-ray analysis of the corresponding N-(S)-2-(6-methoxy-2-naphthyl)propanoyl derivative (S,S,S)-13. PMID:15704972

  5. Experimental and Computational Prediction of the Hydrogen Transport Properties of Pd4S

    SciTech Connect

    Morreale, B.D.; Howard, B.H.; Iyoha, O.; Enick, R.M.; Ling, C.; Sholl, D.S.

    2007-09-12

    Computational and experimental methods were used to quantify the apparent influence of a Pd4S corrosion product resulting from flux testing of 100-micron thick pure palladium membranes in a 0.1%H2S-10%He-H2 retentate gas mixture. The permeability of Pd4S was estimated to be approximately 20 times less than that of pure palladium from the results obtained through sulfide growth kinetics using gravimetric methods and the observed H2 flux decay during permeability characterization from 623 to 908 K. To complement experimental analysis, density functional theory was used to predict the hydrogen permeability of Pd4S by examining diffusivity and solubility of H in bulk Pd4S. Results are in good agreement between the experimental and computational prediction of the activation energy of permeation, while only in moderate agreement when comparing the hydrogen permeability of Pd4S. The permeability values obtained through experimentation were approximately 7 times greater than the computational predictions.

  6. Dissociation products and structures of solid H2S at strong compression

    NASA Astrophysics Data System (ADS)

    Li, Yinwei; Wang, Lin; Liu, Hanyu; Zhang, Yunwei; Hao, Jian; Pickard, Chris J.; Nelson, Joseph R.; Needs, Richard J.; Li, Wentao; Huang, Yanwei; Errea, Ion; Calandra, Matteo; Mauri, Francesco; Ma, Yanming

    2016-01-01

    Hydrogen sulfides have recently received a great deal of interest due to the record high superconducting temperatures of up to 203 K observed on strong compression of dihydrogen sulfide (H2S ). A joint theoretical and experimental study is presented in which decomposition products and structures of compressed H2S are characterized, and their superconducting properties are calculated. In addition to the experimentally known H2S and H3S phases, our first-principles structure searches have identified several energetically competitive stoichiometries that have not been reported previously: H2S3 , H3S2 , HS2, and H4S3 . In particular, H4S3 is predicted to be thermodynamically stable within a large pressure range of 25-113 GPa. High-pressure x-ray diffraction measurements confirm the presence of H3S and H4S3 through decomposition of H2S that emerges at 27 GPa and coexists with residual H2S , at least up to the highest pressure of 140 GPa studied in our experiments. Electron-phonon coupling calculations show that H4S3 has a small T c of below 2 K, and that H2S is mainly responsible for the observed superconductivity of samples prepared at low temperature (<100 K).

  7. Luminal Ca(2+) dynamics during IP3R mediated signals.

    PubMed

    Lopez, Lucia F; Dawson, Silvina Ponce

    2016-01-01

    The role of cytosolic Ca(2+) on the kinetics of Inositol 1,4,5-triphosphate receptors (IP3Rs) and on the dynamics of IP3R-mediated Ca(2+) signals has been studied at large both experimentally and by modeling. The role of luminal Ca(2+) has not been investigated with that much detail although it has been found that it is relevant for signal termination in the case of Ca(2+) release through ryanodine receptors. In this work we present the results of observing the dynamics of luminal and cytosolic Ca(2+) simultaneously in Xenopus laevis oocytes. Combining observations and modeling we conclude that there is a rapid mechanism that guarantees the availability of free Ca(2+) in the lumen even when a relatively large Ca(2+) release is evoked. Comparing the dynamics of cytosolic and luminal Ca(2+) during a release, we estimate that they are consistent with a 80% of luminal Ca(2+) being buffered. The rapid availability of free luminal Ca(2+) correlates with the observation that the lumen occupies a considerable volume in several regions across the images. PMID:27232767

  8. Inherited biallelic CSF3R mutations in severe congenital neutropenia

    PubMed Central

    Triot, Alexa; Järvinen, Päivi M.; Arostegui, Juan I.; Murugan, Dhaarini; Kohistani, Naschla; Dapena Díaz, José Luis; Racek, Tomas; Puchałka, Jacek; Gertz, E. Michael; Schäffer, Alejandro A.; Kotlarz, Daniel; Pfeifer, Dietmar; Díaz de Heredia Rubio, Cristina; Ozdemir, Mehmet Akif; Patiroglu, Turkan; Karakukcu, Musa; Sánchez de Toledo Codina, José; Yagüe, Jordi; Touw, Ivo P.; Unal, Ekrem

    2014-01-01

    Severe congenital neutropenia (SCN) is characterized by low numbers of peripheral neutrophil granulocytes and a predisposition to life-threatening bacterial infections. We describe a novel genetic SCN type in 2 unrelated families associated with recessively inherited loss-of-function mutations in CSF3R, encoding the granulocyte colony-stimulating factor (G-CSF) receptor. Family A, with 3 affected children, carried a homozygous missense mutation (NM_000760.3:c.922C>T, NP_000751.1:p.Arg308Cys), which resulted in perturbed N-glycosylation and aberrant localization to the cell surface. Family B, with 1 affected infant, carried compound heterozygous deletions provoking frameshifts and premature stop codons (NM_000760.3:c.948_963del, NP_000751.1:p.Gly316fsTer322 and NM_000760.3:c.1245del, NP_000751.1:p.Gly415fsTer432). Despite peripheral SCN, all patients had morphologic evidence of full myeloid cell maturation in bone marrow. None of the patients responded to treatment with recombinant human G-CSF. Our study highlights the genetic and morphologic SCN variability and provides evidence both for functional importance and redundancy of G-CSF receptor-mediated signaling in human granulopoiesis. PMID:24753537

  9. Luminal Ca2+ dynamics during IP3R mediated signals

    NASA Astrophysics Data System (ADS)

    Lopez, Lucia F.; Ponce Dawson, Silvina

    2016-06-01

    The role of cytosolic Ca2+ on the kinetics of Inositol 1,4,5-triphosphate receptors (IP3Rs) and on the dynamics of IP3R-mediated Ca2+ signals has been studied at large both experimentally and by modeling. The role of luminal Ca2+ has not been investigated with that much detail although it has been found that it is relevant for signal termination in the case of Ca2+ release through ryanodine receptors. In this work we present the results of observing the dynamics of luminal and cytosolic Ca2+ simultaneously in Xenopus laevis oocytes. Combining observations and modeling we conclude that there is a rapid mechanism that guarantees the availability of free Ca2+ in the lumen even when a relatively large Ca2+ release is evoked. Comparing the dynamics of cytosolic and luminal Ca2+ during a release, we estimate that they are consistent with a 80% of luminal Ca2+ being buffered. The rapid availability of free luminal Ca2+ correlates with the observation that the lumen occupies a considerable volume in several regions across the images.

  10. Recommendations for Use of SQ3R in Introductory Psychology Textbooks

    ERIC Educational Resources Information Center

    Feldt, Ronald C.; Hensley, Robert

    2009-01-01

    We analyzed descriptions found in 12 introductory psychology textbooks on the recommended use of SQ3R for improving reading in order to determine whether such descriptions reflect issues and concerns found in the SQ3R literature. We classified sample questions to determine the types of questions that are suggested to guide use of SQ3R. A majority…

  11. High Affinity Dopamine D3 Receptor (D3R)-Selective Antagonists Attenuate Heroin Self-Administration in Wild-Type but not D3R Knockout Mice.

    PubMed

    Boateng, Comfort A; Bakare, Oluyomi M; Zhan, Jia; Banala, Ashwini K; Burzynski, Caitlin; Pommier, Elie; Keck, Thomas M; Donthamsetti, Prashant; Javitch, Jonathan A; Rais, Rana; Slusher, Barbara S; Xi, Zheng-Xiong; Newman, Amy Hauck

    2015-08-13

    The dopamine D3 receptor (D3R) is a promising target for the development of pharmacotherapeutics to treat substance use disorders. Several D3R-selective antagonists are effective in animal models of drug abuse, especially in models of relapse. Nevertheless, poor bioavailability, metabolic instability, and/or predicted toxicity have impeded success in translating these drug candidates to clinical use. Herein, we report a series of D3R-selective 4-phenylpiperazines with improved metabolic stability. A subset of these compounds was evaluated for D3R functional efficacy and off-target binding at selected 5-HT receptor subtypes, where significant overlap in SAR with D3R has been observed. Several high affinity D3R antagonists, including compounds 16 (Ki = 0.12 nM) and 32 (Ki = 0.35 nM), showed improved metabolic stability compared to the parent compound, PG648 (6). Notably, 16 and the classic D3R antagonist SB277011A (2) were effective in reducing self-administration of heroin in wild-type but not D3R knockout mice. PMID:26203768

  12. A mouse model for a partially inactive obesity-associated human MC3R variant.

    PubMed

    Lee, Bonggi; Koo, Jashin; Yun Jun, Joo; Gavrilova, Oksana; Lee, Yongjun; Seo, Arnold Y; Taylor-Douglas, Dezmond C; Adler-Wailes, Diane C; Chen, Faye; Gardner, Ryan; Koutzoumis, Dimitri; Sherafat Kazemzadeh, Roya; Roberson, Robin B; Yanovski, Jack A

    2016-01-01

    We previously reported children homozygous for two MC3R sequence variants (C17A+G241A) have greater fat mass than controls. Here we show, using homozygous knock-in mouse models in which we replace murine Mc3r with wild-type human (MC3R(hWT/hWT)) and double-mutant (C17A+G241A) human (MC3R(hDM/hDM)) MC3R, that MC3R(hDM/hDM) have greater weight and fat mass, increased energy intake and feeding efficiency, but reduced length and fat-free mass compared with MC3R(hWT/hWT). MC3R(hDM/hDM) mice do not have increased adipose tissue inflammatory cell infiltration or greater expression of inflammatory markers despite their greater fat mass. Serum adiponectin levels are increased in MC3R(hDM/hDM) mice and MC3R(hDM/hDM) human subjects. MC3R(hDM/hDM) bone- and adipose tissue-derived mesenchymal stem cells (MSCs) differentiate into adipocytes that accumulate more triglyceride than MC3R(hWT/hWT) MSCs. MC3R(hDM/hDM) impacts nutrient partitioning to generate increased adipose tissue that appears metabolically healthy. These data confirm the importance of MC3R signalling in human metabolism and suggest a previously-unrecognized role for the MC3R in adipose tissue development. PMID:26818770

  13. The CE3R Network: current status and future perspectives

    NASA Astrophysics Data System (ADS)

    Lenhardt, Wolfgang; Pesaresi, Damiano; Živčić, Mladen; Costa, Giovanni; Kuk, Kresimir; Bondár, István; Duni, Llambro; Spacek, Petr

    2016-04-01

    In order to improve the monitoring of seismic activities in the border regions and to enhance the collaboration between countries and seismological institutions in Central Europe, the Environment Agency of the Slovenian Republic (ARSO), the Italian National Institute for Oceanography and Experimental Geophysics (OGS), the University of Trieste (UniTS) and the Austrian Central Institute for Meteorology and Geodynamics (ZAMG) established in 2001 the "South Eastern Alps Transfrontier Seismological Network". In May 2014 ARSO, OGS, UniTS and ZAMG agreed to formalize the transfrontier network, to name it "Central and East European Earthquake Research Network", (CE3RN or CE3R Network) in order to locate it geographically since cross-border networks can be established in other areas of the world and to expand their cooperation, including institutions in other countries. The University of Zagreb (UniZG) joined CE3RN in October 2014. The Kövesligethy Radó Seismological Observatory (KRSZO) of the Hungarian Academy of Sciences joined CE3RN in October 2015. The Institute of Geosciences, Energy, Water and Environment (IGEWE) of the Polytechnic University of Tirana joined CE3RN in November 2015. The Institute of Physics of the Earth (IPE) of the Masaryk University in Brno joined CE3RN in November 2015. CE3RN Parties intend to formalize and possibly extend their ongoing cooperation in the field of seismological data acquisition, exchange and use for seismological and earthquake engineering and civil protection purposes. The purpose of this cooperation is to retain and expand the existing cross-border network, specify the rules of conduct in the network management, improvements, extensions and enlargements, enhance seismological research in the region, and support civil protection activities. Since the formal establishment of CE3RN, several common projects have been completed, like the SeismoSAT project for the seismic data center connection over satellite funded by the Interreg

  14. Bulk superconductivity in bismuth oxysulfide Bi4O4S3.

    PubMed

    Singh, Shiva Kumar; Kumar, Anuj; Gahtori, Bhasker; Shruti; Sharma, Gyaneshwar; Patnaik, Satyabrata; Awana, Veer P S

    2012-10-10

    A very recent report on the observation of superconductivity in Bi(4)O(4)S(3) [Mizuguchi, Y.; http://arxiv.org/abs/1207.3145] could potentially reignite the search for superconductivity in a broad range of layered sulfides. We report here the synthesis of Bi(4)O(4)S(3) at 500 °C by a vacuum encapsulation technique and its basic characterizations. The as-synthesized Bi(4)O(4)S(3) was contaminated with small amounts of Bi(2)S(3) and Bi impurities. The majority phase was found to be tetragonal (space group I4/mmm) with lattice parameters a = 3.9697(2) Å and c = 41.3520(1) Å. Both AC and DC magnetization measurements confirmed that Bi(4)O(4)S(3) is a bulk superconductor with a superconducting transition temperature (T(c)) of 4.4 K. Isothermal magnetization (M-H) measurements indicated closed loops with clear signatures of flux pinning and irreversible behavior. The lower critical field (H(c1)) at 2 K for the new superconductor was found to be ~15 Oe. Magnetotransport measurements showed a broadening of the resistivity (ρ) and a decrease in T(c) (ρ = 0) with increasing magnetic field. The extrapolated upper critical field H(c2)(0) was ~31 kOe with a corresponding Ginzburg-Landau coherence length of ~100 Å . In the normal state, the ρ ~ T(2) dependence was not indicated. Hall resistivity data showed a nonlinear magnetic field dependence. Our magnetization and electrical transport measurements substantiate the appearance of bulk superconductivity in as-synthesized Bi(4)O(4)S(3). On the other hand, Bi heat-treated at the same temperature is not superconducting, thus excluding the possibility of impurity-driven superconductivity in the newly discovered superconductor Bi(4)O(4)S(3). PMID:23003214

  15. Removal of H2S from gas stream using combined plasma photolysis technique at atmospheric pressure.

    PubMed

    Huang, Li; Xia, Lanyan; Ge, Xiaoxue; Jing, Hengye; Dong, Wenbo; Hou, Huiqi

    2012-06-01

    In this paper, H(2)S in gas stream was successfully decomposed at atmospheric pressure by dielectric barrier discharge plasma and VUV-UV radiation from a combined plasma photolysis reactor (CDBD). In comparison with DBD, CDBD enhanced H(2)S removal efficiency significantly at the same applied voltage, inlet H(2)S concentration and gas residence time. H(2)S removal efficiency was determined as a function of Kr pressure, applied voltage, inlet H(2)S concentration, and gas residence time. H(2)S removal efficiency could reach as high as 93% at inlet H(2)S concentration of 27.1 mg m(-3), residence time of 0.4 s, and applied voltage of 7.5 kV. The main products were discerned as H(2)O and SO(4)(2-) based on FTIR and IC analysis. PMID:22436586

  16. Study of hadronic transitions between Υ states and observation of Υ(4S)→ηΥ(1S) decay

    NASA Astrophysics Data System (ADS)

    Aubert, B.; Bona, M.; Karyotakis, Y.; Lees, J. P.; Poireau, V.; Prencipe, E.; Prudent, X.; Tisserand, V.; Tico, J. Garra; Grauges, E.; Lopez, L.; Palano, A.; Pappagallo, M.; Eigen, G.; Stugu, B.; Sun, L.; Abrams, G. S.; Battaglia, M.; Brown, D. N.; Cahn, R. N.; Jacobsen, R. G.; Kerth, L. T.; Kolomensky, Yu. G.; Kukartsev, G.; Lynch, G.; Osipenkov, I. L.; Ronan, M. T.; Tackmann, K.; Tanabe, T.; Hawkes, C. M.; Soni, N.; Watson, A. T.; Koch, H.; Schroeder, T.; Walker, D.; Asgeirsson, D. J.; Fulsom, B. G.; Hearty, C.; Mattison, T. S.; McKenna, J. A.; Barrett, M.; Khan, A.; Teodorescu, L.; Blinov, V. E.; Bukin, A. D.; Buzykaev, A. R.; Druzhinin, V. P.; Golubev, V. B.; Onuchin, A. P.; Serednyakov, S. I.; Skovpen, Yu. I.; Solodov, E. P.; Todyshev, K. Yu.; Bondioli, M.; Curry, S.; Eschrich, I.; Kirkby, D.; Lankford, A. J.; Lund, P.; Mandelkern, M.; Martin, E. C.; Stoker, D. P.; Abachi, S.; Buchanan, C.; Gary, J. W.; Liu, F.; Long, O.; Shen, B. C.; Vitug, G. M.; Yasin, Z.; Zhang, L.; Sharma, V.; Campagnari, C.; Hong, T. M.; Kovalskyi, D.; Mazur, M. A.; Richman, J. D.; Beck, T. W.; Eisner, A. M.; Flacco, C. J.; Heusch, C. A.; Kroseberg, J.; Lockman, W. S.; Schalk, T.; Schumm, B. A.; Seiden, A.; Wang, L.; Wilson, M. G.; Winstrom, L. O.; Cheng, C. H.; Doll, D. A.; Echenard, B.; Fang, F.; Hitlin, D. G.; Narsky, I.; Piatenko, T.; Porter, F. C.; Andreassen, R.; Mancinelli, G.; Meadows, B. T.; Mishra, K.; Sokoloff, M. D.; Bloom, P. C.; Ford, W. T.; Gaz, A.; Hirschauer, J. F.; Kreisel, A.; Nagel, M.; Nauenberg, U.; Smith, J. G.; Ulmer, K. A.; Wagner, S. R.; Ayad, R.; Soffer, A.; Toki, W. H.; Wilson, R. J.; Altenburg, D. D.; Feltresi, E.; Hauke, A.; Jasper, H.; Karbach, M.; Merkel, J.; Petzold, A.; Spaan, B.; Wacker, K.; Kobel, M. J.; Mader, W. F.; Nogowski, R.; Schubert, K. R.; Schwierz, R.; Sundermann, J. E.; Volk, A.; Bernard, D.; Bonneaud, G. R.; Latour, E.; Thiebaux, Ch.; Verderi, M.; Clark, P. J.; Gradl, W.; Playfer, S.; Watson, J. E.; Andreotti, M.; Bettoni, D.; Bozzi, C.; Calabrese, R.; Cecchi, A.; Cibinetto, G.; Franchini, P.; Luppi, E.; Negrini, M.; Petrella, A.; Piemontese, L.; Santoro, V.; Baldini-Ferroli, R.; Calcaterra, A.; de Sangro, R.; Finocchiaro, G.; Pacetti, S.; Patteri, P.; Peruzzi, I. M.; Piccolo, M.; Rama, M.; Zallo, A.; Buzzo, A.; Contri, R.; Lo Vetere, M.; Macri, M. M.; Monge, M. R.; Passaggio, S.; Patrignani, C.; Robutti, E.; Santroni, A.; Tosi, S.; Chaisanguanthum, K. S.; Morii, M.; Marks, J.; Schenk, S.; Uwer, U.; Klose, V.; Lacker, H. M.; Bard, D. J.; Dauncey, P. D.; Nash, J. A.; Vazquez, W. Panduro; Tibbetts, M.; Behera, P. K.; Chai, X.; Charles, M. J.; Mallik, U.; Cochran, J.; Crawley, H. B.; Dong, L.; Meyer, W. T.; Prell, S.; Rosenberg, E. I.; Rubin, A. E.; Gao, Y. Y.; Gritsan, A. V.; Guo, Z. J.; Lae, C. K.; Denig, A. G.; Fritsch, M.; Schott, G.; Arnaud, N.; Béquilleux, J.; D'Orazio, A.; Davier, M.; da Costa, J. Firmino; Grosdidier, G.; Höcker, A.; Lepeltier, V.; Le Diberder, F.; Lutz, A. M.; Pruvot, S.; Roudeau, P.; Schune, M. H.; Serrano, J.; Sordini, V.; Stocchi, A.; Wormser, G.; Lange, D. J.; Wright, D. M.; Bingham, I.; Burke, J. P.; Chavez, C. A.; Fry, J. R.; Gabathuler, E.; Gamet, R.; Hutchcroft, D. E.; Payne, D. J.; Touramanis, C.; Bevan, A. J.; Clarke, C. K.; George, K. A.; di Lodovico, F.; Sacco, R.; Sigamani, M.; Cowan, G.; Flaecher, H. U.; Hopkins, D. A.; Paramesvaran, S.; Salvatore, F.; Wren, A. C.; Brown, D. N.; Davis, C. L.; Alwyn, K. E.; Bailey, D. S.; Barlow, R. J.; Chia, Y. M.; Edgar, C. L.; Lafferty, G. D.; West, T. J.; Yi, J. I.; Anderson, J.; Chen, C.; Jawahery, A.; Roberts, D. A.; Simi, G.; Tuggle, J. M.; Dallapiccola, C.; Li, X.; Salvati, E.; Saremi, S.; Cowan, R.; Dujmic, D.; Fisher, P. H.; Koeneke, K.; Sciolla, G.; Spitznagel, M.; Taylor, F.; Yamamoto, R. K.; Zhao, M.; Patel, P. M.; Robertson, S. H.; Lazzaro, A.; Lombardo, V.; Palombo, F.; Bauer, J. M.; Cremaldi, L.; Eschenburg, V.; Godang, R.; Kroeger, R.; Sanders, D. A.; Summers, D. J.; Zhao, H. W.; Simard, M.; Taras, P.; Viaud, F. B.; Nicholson, H.; de Nardo, G.; Lista, L.; Monorchio, D.; Onorato, G.; Sciacca, C.; Raven, G.; Snoek, H. L.; Jessop, C. P.; Knoepfel, K. J.; Losecco, J. M.; Wang, W. F.; Benelli, G.; Corwin, L. A.; Honscheid, K.; Kagan, H.; Kass, R.; Morris, J. P.; Rahimi, A. M.; Regensburger, J. J.; Sekula, S. J.; Wong, Q. K.; Blount, N. L.; Brau, J.; Frey, R.; Igonkina, O.; Kolb, J. A.; Lu, M.; Rahmat, R.; Sinev, N. B.; Strom, D.; Strube, J.; Torrence, E.; Castelli, G.; Gagliardi, N.; Margoni, M.; Morandin, M.; Posocco, M.; Rotondo, M.; Simonetto, F.; Stroili, R.; Voci, C.; Del Amo Sanchez, P.; Ben-Haim, E.; Briand, H.; Calderini, G.; Chauveau, J.; David, P.; Del Buono, L.; Hamon, O.; Leruste, Ph.; Ocariz, J.; Perez, A.; Prendki, J.; Gladney, L.; Biasini, M.; Covarelli, R.; Manoni, E.; Angelini, C.; Batignani, G.; Bettarini, S.; Carpinelli, M.; Cervelli, A.; Forti, F.; Giorgi, M. A.; Lusiani, A.; Marchiori, G.; Morganti, M.; Neri, N.; Paoloni, E.; Rizzo, G.; Walsh, J. J.; Biesiada, J.; Pegna, D. Lopes; Lu, C.; Olsen, J.; Smith, A. J. S.; Telnov, A. V.; Anulli, F.; Baracchini, E.; Cavoto, G.; Del Re, D.; di Marco, E.; Faccini, R.; Ferrarotto, F.; Ferroni, F.; Gaspero, M.; Jackson, P. D.; Gioi, L. Li; Mazzoni, M. A.; Morganti, S.; Piredda, G.; Polci, F.; Renga, F.; Voena, C.; Ebert, M.; Hartmann, T.; Schröder, H.; Waldi, R.; Adye, T.; Franek, B.; Olaiya, E. O.; Roethel, W.; Wilson, F. F.; Emery, S.; Escalier, M.; Esteve, L.; Gaidot, A.; Ganzhur, S. F.; de Monchenault, G. Hamel; Kozanecki, W.; Vasseur, G.; Yèche, Ch.; Zito, M.; Chen, X. R.; Liu, H.; Park, W.; Purohit, M. V.; White, R. M.; Wilson, J. R.; Allen, M. T.; Aston, D.; Bartoldus, R.; Bechtle, P.; Benitez, J. F.; Cenci, R.; Coleman, J. P.; Convery, M. R.; Dingfelder, J. C.; Dorfan, J.; Dubois-Felsmann, G. P.; Dunwoodie, W.; Field, R. C.; Gabareen, A. M.; Gowdy, S. J.; Graham, M. T.; Grenier, P.; Hast, C.; Innes, W. R.; Kaminski, J.; Kelsey, M. H.; Kim, H.; Kim, P.; Kocian, M. L.; Leith, D. W. G. S.; Li, S.; Lindquist, B.; Luitz, S.; Luth, V.; Lynch, H. L.; Macfarlane, D. B.; Marsiske, H.; Messner, R.; Muller, D. R.; Neal, H.; Nelson, S.; O'Grady, C. P.; Ofte, I.; Perazzo, A.; Perl, M.; Ratcliff, B. N.; Roodman, A.; Salnikov, A. A.; Schindler, R. H.; Schwiening, J.; Snyder, A.; Su, D.; Sullivan, M. K.; Suzuki, K.; Swain, S. K.; Thompson, J. M.; Va'Vra, J.; Wagner, A. P.; Weaver, M.; West, C. A.; Wisniewski, W. J.; Wittgen, M.; Wright, D. H.; Wulsin, H. W.; Yarritu, A. K.; Yi, K.; Young, C. C.; Ziegler, V.; Burchat, P. R.; Edwards, A. J.; Majewski, S. A.; Miyashita, T. S.; Petersen, B. A.; Wilden, L.; Ahmed, S.; Alam, M. S.; Ernst, J. A.; Pan, B.; Saeed, M. A.; Zain, S. B.; Spanier, S. M.; Wogsland, B. J.; Eckmann, R.; Ritchie, J. L.; Ruland, A. M.; Schilling, C. J.; Schwitters, R. F.; Drummond, B. W.; Izen, J. M.; Lou, X. C.; Bianchi, F.; Gamba, D.; Pelliccioni, M.; Bomben, M.; Bosisio, L.; Cartaro, C.; Della Ricca, G.; Lanceri, L.; Vitale, L.; Azzolini, V.; Lopez-March, N.; Martinez-Vidal, F.; Milanes, D. A.; Oyanguren, A.; Albert, J.; Banerjee, Sw.; Bhuyan, B.; Choi, H. H. F.; Hamano, K.; Kowalewski, R.; Lewczuk, M. J.; Nugent, I. M.; Roney, J. M.; Sobie, R. J.; Gershon, T. J.; Harrison, P. F.; Ilic, J.; Latham, T. E.; Mohanty, G. B.; Band, H. R.; Chen, X.; Dasu, S.; Flood, K. T.; Pan, Y.; Pierini, M.; Prepost, R.; Vuosalo, C. O.; Wu, S. L.

    2008-12-01

    We present a study of hadronic transitions between Υ(mS) (m=4, 3, 2) and Υ(nS) (n=2, 1) resonances based on 347.5fb-1 of data taken with the BABAR detector at the PEP-II storage rings. We report the first observation of Υ(4S)→ηΥ(1S) decay with a branching fraction B(Υ(4S)→ηΥ(1S))=(1.96±0.06stat±0.09syst)×10-4 and measure the ratio of partial widths Γ(Υ(4S)→ηΥ(1S))/Γ(Υ(4S)→π+π-Υ(1S))=2.41±0.40stat±0.12syst. We set 90% CL upper limits on the ratios Γ(Υ(2S)→ηΥ(1S))/Γ(Υ(2S)→π+π-Υ(1S))<5.2×10-3 and Γ(Υ(3S)→ηΥ(1S))/Γ(Υ(3S)→π+π-Υ(1S))<1.9×10-2. We also present new measurements of the ratios Γ(Υ(4S)→π+π-Υ(2S))/Γ(Υ(4S)→π+π-Υ(1S))=1.16±0.16stat±0.14syst and Γ(Υ(3S)→π+π-Υ(2S))/Γ(Υ(3S)→π+π-Υ(1S))=0.577±0.026stat±0.060syst.

  17. Electron transfer between [4Fe-4S] clusters

    NASA Astrophysics Data System (ADS)

    Voityuk, Alexander A.

    2010-07-01

    Iron-sulfur clusters [4Fe-4S] are major components in biological electron transport (ET). Using the DFT/B3LYP method, we calculate electronic coupling for low- and high-potential ET between [4Fe-4S] clusters and explore its sensitivity to structural parameters of the system and external electric field. As an example, we consider a model of the bacterial respiratory complex I and estimate the role of neighboring amino acids in facilitating the ET process between the clusters. Our results suggest that the superexchange mechanism rather than hole hopping should be operative in ET between [4Fe-4S] redox centers.

  18. Optical and electronic properties of semiconducting Sn2S3

    NASA Astrophysics Data System (ADS)

    Singh, David J.

    2016-07-01

    We report the electronic and optical properties of Sn2S3 as obtained from first principles calculations with the modified Becke-Johnson potential. The electronic structure shows that Sn occurs in both divalent and tetravalent forms. The fundamental band gap of 0.82 eV is indirect. The direct gap is 0.97 eV, but the onset of strong optical absorption is much higher at ˜1.75 eV. This is as a consequence of the Sn2+ s and Sn4+ s characters of the valence and conduction band extrema, respectively. We also find strong and different anisotropies for conduction in p- and n-type Sn2S3. This should be taken into account in device structures in order to obtain efficient charge collection. The thermopowers are reasonably high for both p- and n-type materials. p-type Sn2S3 shows complex corrugated isosurface sections, while the n-type material shows multiple band extrema.

  19. Isotope shift and hyperfine splitting of the 4s{yields}5p transition in potassium

    SciTech Connect

    Behrle, Alexandra; Koschorreck, Marco; Koehl, Michael

    2011-05-15

    We have investigated the 4s {sup 2}S{sub 1/2}{yields}5p {sup 2}P{sub 1/2} transition (D{sub 1} line) of the potassium isotopes {sup 39}K, {sup 40}K, and {sup 41}K using Doppler-free laser saturation spectroscopy. Our measurements reveal the hyperfine splitting of the 5p {sup 2}P{sub 1/2} state of {sup 40}K, and we have determined the specific mass shift and the nuclear field shift constants for the blue (405 nm) D{sub 1} line.

  20. Synthesis of fully protected, reverse N-prenylated (2S,3R)-3-hydroxytryptophan, a unique building block of the cyclomarins.

    PubMed

    Barbie, Philipp; Kazmaier, Uli

    2015-09-21

    Reverse N-prenylated 3-hydroxytryptophan, the rather exotic amino acid of the cyclomarins, is obtained in enantio- and diastereomerically pure and fully protected form by a combination of a highly stereoselective addition of a zincated indole toward protected serinal and subsequent palladium-catalyzed N-prenylation. PMID:26229033

  1. Controlling H{sub 2}S emissions

    SciTech Connect

    Nagl, G.J.

    1997-03-01

    With its signature rotten egg smell, hydrogen sulfide (H{sub 2}S) is not only odorous, but corrosive and toxic, too. It is produced naturally, by the anaerobic decomposition of sulfur-bearing materials, and synthetically, by a host of chemical process operations, including hydrogenation and hydrodesulfurization and coking. Many processes have been developed to convert H{sub 2}S to innocuous forms, such as elemental sulfur and sulfates. Selecting the best one depends on the overall composition and variability of the gas stream, the concentration of H{sub 2}S present, and the absolute quantity of H{sub 2}S to be removed. This article describes the advantages and disadvantages of seven H{sub 2}S removal systems. Described are: the Claus process, chemical oxidants, caustic scrubbers, adsorption, H{sub 2}S scavengers, amine absorption units, and liquid-phase oxidation systems.

  2. Two Methods for Making the Steps of the SQ3R More Concrete.

    ERIC Educational Resources Information Center

    Paulson, Peter L.

    Index cards and audio tape can make the steps of the SQ3R system of study more concrete. This method can be particularly beneficial to "average" college students, who for whatever reason, have difficulty sustaining concentration while reading. The SQ3R method is suitable because of its simplicity, diversity of application, adaptability to…

  3. Superconductivity in semimetallic Bi3O2S3

    DOE PAGESBeta

    Li, L.; Parker, D.; Babkevich, P.; Yang, L.; Ronnow, H. M.; Sefat, A. S.

    2015-03-12

    We report in this paper a further investigation on the thermodynamic and transport properties, and an assessment of theoretical calculations, for the BiS2-layered Bi3O2S3 superconductor. The polycrystalline sample is synthesized with a superconducting transition temperature of Tconset=5.75K and Tczero=4.03K (≈Tcmag) that drops to 3.3 K by applying a hydrostatic pressure of 6 kbar. Density-of-states (DOS) calculations give substantial hybridization between Bi, O, and S, with Bi the largest component of DOS, which supports the idea that the BiS2 layer is relevant for producing electron-phonon coupling. An analysis of previously published specific heat data for Bi3O2S3 is additionally suggestive of amore » strong electron-phonon interaction in the Bi-O-S system. The analysis of the Seebeck coefficient results strongly suggests that Bi3O2S3 is a semimetal. In fact, we found the semimetallic or narrow band gap behavior may occur in certain other materials in the BiS2-layered class of materials, such as Bi4O4S3.« less

  4. First observation of the decay B0→ψ (2 S )π0

    NASA Astrophysics Data System (ADS)

    Chobanova, V.; Dalseno, J.; Kiesling, C.; Abdesselam, A.; Adachi, I.; Aihara, H.; Asner, D. M.; Aushev, T.; Ayad, R.; Babu, V.; Badhrees, I.; Bahinipati, S.; Bakich, A. M.; Barberio, E.; Behera, P.; Bhardwaj, V.; Bhuyan, B.; Biswal, J.; Bobrov, A.; Bozek, A.; Bračko, M.; Browder, T. E.; Červenkov, D.; Chekelian, V.; Chen, A.; Cheon, B. G.; Chistov, R.; Cho, K.; Choi, Y.; Cinabro, D.; Dash, N.; Doležal, Z.; Drásal, Z.; Drutskoy, A.; Eidelman, S.; Farhat, H.; Fast, J. E.; Ferber, T.; Fulsom, B. G.; Gaur, V.; Gabyshev, N.; Garmash, A.; Gillard, R.; Goh, Y. M.; Goldenzweig, P.; Golob, B.; Grzymkowska, O.; Haba, J.; Hara, T.; Hayasaka, K.; Hayashii, H.; Hou, W.-S.; Iijima, T.; Inami, K.; Ishikawa, A.; Iwasaki, Y.; Jaegle, I.; Jeon, H. B.; Joffe, D.; Joo, K. K.; Julius, T.; Kato, E.; Katrenko, P.; Kawasaki, T.; Kim, D. Y.; Kim, H. J.; Kim, J. B.; Kim, K. T.; Kim, M. J.; Kim, S. H.; Kim, Y. J.; Kinoshita, K.; Kodyš, P.; Korpar, S.; Križan, P.; Krokovny, P.; Kuhr, T.; Kumar, R.; Kumita, T.; Kuzmin, A.; Kwon, Y.-J.; Lee, I. S.; Li, H.; Li, L.; Li, Y.; Li Gioi, L.; Libby, J.; Liventsev, D.; Masuda, M.; Matvienko, D.; Miyabayashi, K.; Miyata, H.; Mizuk, R.; Mohanty, G. B.; Mohanty, S.; Moll, A.; Moon, H. K.; Mori, T.; Mussa, R.; Nakano, E.; Nakao, M.; Nanut, T.; Natkaniec, Z.; Nayak, M.; Nedelkovska, E.; Nisar, N. K.; Nishida, S.; Ogawa, S.; Pakhlov, P.; Pakhlova, G.; Pal, B.; Park, C. W.; Park, H.; Paul, S.; Pedlar, T. K.; Pestotnik, R.; Petrič, M.; Piilonen, L. E.; Pulvermacher, C.; Rauch, J.; Ribežl, E.; Ritter, M.; Ryu, S.; Sahoo, H.; Sakai, Y.; Sandilya, S.; Sanuki, T.; Savinov, V.; Schlüter, T.; Schneider, O.; Schnell, G.; Schwanda, C.; Schwartz, A. J.; Seino, Y.; Senyo, K.; Seon, O.; Sevior, M. E.; Shebalin, V.; Shibata, T.-A.; Shiu, J.-G.; Shwartz, B.; Simon, F.; Singh, J. B.; Sohn, Y.-S.; Sokolov, A.; Solovieva, E.; Starič, M.; Stypula, J.; Sumihama, M.; Sumisawa, K.; Sumiyoshi, T.; Tamponi, U.; Teramoto, Y.; Trabelsi, K.; Uchida, M.; Uehara, S.; Uglov, T.; Unno, Y.; Uno, S.; Urquijo, P.; Usov, Y.; Van Hulse, C.; Vanhoefer, P.; Varner, G.; Vinokurova, A.; Vorobyev, V.; Wagner, M. N.; Wang, C. H.; Wang, M.-Z.; Wang, P.; Wang, X. L.; Watanabe, M.; Watanabe, Y.; Williams, K. M.; Won, E.; Yamaoka, J.; Yashchenko, S.; Ye, H.; Yelton, J.; Yuan, C. Z.; Yusa, Y.; Zhang, Z. P.; Zhilich, V.; Zhulanov, V.; Zupanc, A.; Belle Collaboration

    2016-02-01

    We report a measurement of the B0→ψ (2 S )π0 branching fraction based on the full ϒ (4 S ) data set of 772 ×106 B B ¯ pairs collected by the Belle detector at the KEKB asymmetric-energy e+e- collider. We obtain B (B0→ψ (2 S )π0 )=(1.17 ±0.17 (stat ) ±0.08 (syst ) )×10-5 . The result has a significance of 7.2 standard deviations and is the first observation of the decay B0→ψ (2 S )π0.

  5. CYP2S1: A short review

    SciTech Connect

    Saarikoski, Sirkku T. . E-mail: sirkku.saarikoski@ktl.fi; Rivera, Steven P.; Hankinson, Oliver; Husgafvel-Pursiainen, Kirsti

    2005-09-01

    A new member of the cytochrome P450 superfamily, CYP2S1, has recently been identified in human and mouse. In this paper, we review the data currently available for CYP2S1. The human CYP2S1 gene is located in chromosome 19q13.2 within a cluster including CYP2 family members CYP2A6, CYP2A13, CYP2B6, and CYP2F1. These genes also show the highest homology to the human CYP2S1. The gene has recently been found to harbor genetic polymorphism. CYP2S1 is inducible by dioxin, the induction being mediated by the Aryl Hydrocarbon Receptor (AHR) and Aryl Hydrocarbon Nuclear Translocator (ARNT) in a manner typical for CYP1 family members. In line with this, CYP2S1 has been shown to be inducible by coal tar, an abundant source of PAHs, and it was recently reported to metabolize naphthalene. This points to the involvement of CYP2S1 in the metabolism of toxic and carcinogenic compounds, similar to other dioxin-inducible CYPs. CYP2S1 is expressed in epithelial cells of a wide variety of extrahepatic tissues. The highest expression levels have been observed in the epithelial tissues frequently exposed to xenobiotics, e.g., the respiratory, gastrointestinal, and urinary tracts, and in the skin. The observed ubiquitous tissue distribution, as well as the expression of CYP2S1 throughout embryogenesis suggest that CYP2S1 is likely to metabolize important endogenous substrates; thus far, retinoic acid has been identified. In conclusion, CYP2S1 exhibits many features of interest for human health and thus warrants further investigation.

  6. CYP2S1: a short review.

    PubMed

    Saarikoski, Sirkku T; Rivera, Steven P; Hankinson, Oliver; Husgafvel-Pursiainen, Kirsti

    2005-09-01

    A new member of the cytochrome P450 superfamily, CYP2S1, has recently been identified in human and mouse. In this paper, we review the data currently available for CYP2S1. The human CYP2S1 gene is located in chromosome 19q13.2 within a cluster including CYP2 family members CYP2A6, CYP2A13, CYP2B6, and CYP2F1. These genes also show the highest homology to the human CYP2S1. The gene has recently been found to harbor genetic polymorphism. CYP2S1 is inducible by dioxin, the induction being mediated by the Aryl Hydrocarbon Receptor (AHR) and Aryl Hydrocarbon Nuclear Translocator (ARNT) in a manner typical for CYP1 family members. In line with this, CYP2S1 has been shown to be inducible by coal tar, an abundant source of PAHs, and it was recently reported to metabolize naphthalene. This points to the involvement of CYP2S1 in the metabolism of toxic and carcinogenic compounds, similar to other dioxin-inducible CYPs. CYP2S1 is expressed in epithelial cells of a wide variety of extrahepatic tissues. The highest expression levels have been observed in the epithelial tissues frequently exposed to xenobiotics, e.g., the respiratory, gastrointestinal, and urinary tracts, and in the skin. The observed ubiquitous tissue distribution, as well as the expression of CYP2S1 throughout embryogenesis suggest that CYP2S1 is likely to metabolize important endogenous substrates; thus far, retinoic acid has been identified. In conclusion, CYP2S1 exhibits many features of interest for human health and thus warrants further investigation. PMID:16054184

  7. Compositional Analysis of Asymmetric and Symmetric Dimethylated H3R2 Using Liquid Chromatography-Tandem Mass Spectrometry-Based Targeted Proteomics.

    PubMed

    Xu, Qingqing; Xu, Feifei; Liu, Liang; Chen, Yun

    2016-09-01

    Protein arginine methylation is one of the common post-translational modifications in cellular processes. To date, two isomeric forms of dimethylated arginine have been identified: asymmetric N(G),N(G)-dimethylarginine (aDMA), and symmetric N(G),N'(G)-dimethylarginine (sDMA). Evidence indicated that these isomers can coexist and have different or even opposite functions, with aDMA and sDMA forms of arginine 2 on histone H3 (i.e., H3R2me2a and H3R2me2s) being an example. Thus, specific detection and quantification of each isomeric form is important. Current methods are capable of predicting and detecting thousands of methylarginine sites in proteins, whereas differentiation and stoichiometric measurement of dimethylated protein isomers are still challenging. Liquid chromatography coupled with tandem mass spectrometry (LC-MS/MS)-based targeted proteomics has emerged as a promising technique for site-specific quantification of protein methylation using enzymatic peptides as surrogates of target proteins. However, it should be pointed out that a routine targeted proteomics strategy cannot easily distinguish sDMA- and aDMA-containing surrogate peptides due to their common nature. The estimated amount should be considered as the sum of both arginine dimethylated isomers. In this study, compositional analysis based on a linear algebra algorithm as an add-on to targeted proteomics was employed to quantify H3R2me2a and H3R2me2s (i.e., surrogate peptides of AR(me2a)TK(me1/2)QT and AR(me2s)TK(me1/2)QT). To achieve this simultaneous quantification, a targeted proteomics assay was developed and validated for each isomer first. With the slope and intercept of their calibration curves for each multiple reaction monitoring (MRM) transition, linear algebraic equations were derived. Using a series of mock mixtures consisting of isomers in varying concentrations, the reliability of the method was confirmed. Finally, the H3R2 dimethylation status was analyzed in normal MCF-10A cells

  8. Instability of the 2S electron bubbles.

    PubMed

    Grinfeld, Pavel; Kojima, Haruo

    2003-09-01

    The 2S electron bubble placed in liquid helium has been previously believed to be spherical. We show that the 2S bubble is morphologically unstable at pressures above -1.23 bars. The 2S state being known to be radially unstable at pressures below -1.33 bars, the result leaves only a very narrow pressure range in which it can be found in a spherical configuration. Our stability analysis indicates that the 2S bubble is unstable against perturbations proportional to any of the third spherical harmonics Y(3m). Our numerical simulations show that there exist nonspherical stable configurations, such as the ones Maris and Konstantinov predicted for the 1P, 1D, and 2P electron bubbles and confirmed experimentally for the 1P. We believe that the 2S bubbles can also be produced and that our prediction will yield itself to experimental verification. PMID:14525485

  9. Toward a High-Resolution Structure of IP3R Channel

    PubMed Central

    Serysheva, Irina I.

    2014-01-01

    The ability of cells to maintain low levels of Ca2+ under resting conditions and to create rapid and transient increases in Ca2+ upon stimulation is a fundamental property of cellular Ca2+ signaling mechanism. An increase of cytosolic Ca2+ level in response to diverse stimuli is largely accounted for by the inositol 1,4,5-trisphosphate receptor (IP3R) present in the endoplasmic reticulum membranes of virtually all eukaryotic cells. Extensive information is currently available on the function of IP3Rs and their interaction with modulators. Very little, however, is known about their molecular architecture and therefore most critical issues surrounding gating of IP3R channels are still ambiguous, including the central question of how opening of the IP3R pore is initiated by IP3 and Ca2+. Membrane proteins such as IP3R channels have proven to be exceptionally difficult targets for structural analysis due to their large size, their location in the membrane environment, and their dynamic nature. To date, a 3D structure of complete IP3R channel is determined by single-particle cryo-EM at intermediate resolution, and the best crystal structures of IP3R are limited to a soluble portion of the cytoplasmic region representing ~15% of the entire channel protein. Together these efforts provide the important structural information for this class of ion channels and serve as the basis for further studies aiming at understanding of the IP3R function. PMID:25159857

  10. First- and second-order PMD mitigation using 3R regeneration

    NASA Astrophysics Data System (ADS)

    Pan, Shilong; Huo, Li; Yang, Yanfu; Lou, Caiyun; Gao, Yizhi

    2005-11-01

    We experimentally studied the PMD mitigation schemes using two different optical 3R regenerators. One is based on synchronous modulation and the other using an optical decision gate based on an electroabsorption modulator. The experimental results show that both schemes are useful to mitigate the signal quality degeneration induced by both first and second order PMD. System performance without and with 3R regeneration was separately studied by eye analysis and BER measurements. The signal quality was significantly improved by 3R regeneration under serious 1st-order PMD (up to 40% of the bit interval) combined with 2nd-order PMD (up to ~520ps2). We compared the performance between the two different 3R regenerators. The results show that 3R regenerator using an optical decision gate has a superior performance in synchronously mitigating 1st-order and 2nd-order PMD. Moreover, 3R based on EAM performs wavelength conversion simultaneously, which can be used to avoid wavelength blocking at nodes of the optical networks. Further studies indicate that 3R regenerators have the potential to combat with the effects of PMD combined with PDL and PHB. The limitation of the two schemes is also discussed.

  11. Identification of (2S,3S)-β-Methyltryptophan as the Real Biosynthetic Intermediate of Antitumor Agent Streptonigrin

    PubMed Central

    Kong, Dekun; Zou, Yi; Zhang, Zhang; Xu, Fei; Brock, Nelson L.; Zhang, Liping; Deng, Zixin; Lin, Shuangjun

    2016-01-01

    Streptonigrin is a potent antitumor antibiotic, active against a wide range of mammalian tumor cells. It was reported that its biosynthesis relies on (2S,3R)-β-methyltryptophan as an intermediate. In this study, the biosynthesis of (2S,3R)-β-methyltryptophan and its isomer (2S,3S)-β-methyltryptophan by enzymes from the streptonigrin biosynthetic pathway is demonstrated. StnR is a pyridoxal 5′-phosphate (PLP)-dependent aminotransferase that catalyzes a transamination between L-tryptophan and β-methyl indolepyruvate. StnQ1 is an S-adenosylmethionine (SAM)-dependent C-methyltransferase and catalyzes β-methylation of indolepyruvate to generate (R)-β-methyl indolepyruvate. Although StnR exhibited a significant preference for (S)-β-methyl indolepyruvate over the (R)-epimer, StnQ1 and StnR together catalyze (2S,3R)-β-methyltryptophan formation from L-tryptophan. StnK3 is a cupin superfamily protein responsible for conversion of (R)-β-methyl indolepyruvate to its (S)-epimer and enables (2S,3S)-β-methyltryptophan biosynthesis from L-tryptophan when combined with StnQ1 and StnR. Most importantly, (2S,3S)-β-methyltryptophan was established as the biosynthetic intermediate of the streptonigrin pathway by feeding experiments with a knockout mutant, contradicting the previous proposal that stated (2S,3R)-β-methyltryptophan as the intermediate. These data set the stage for the complete elucidation of the streptonigrin biosynthetic pathway, which would unlock the potential of creating new streptonigrin analogues by genetic manipulation of the biosynthetic machinery. PMID:26847951

  12. Separation dynamic research of Long March 4's payload fairing

    NASA Astrophysics Data System (ADS)

    Wang, Shunliang; Dong, Wenyuan

    1993-08-01

    Dynamic analysis is conducted using the MSC/NASTRAN software on the multipoint pyrotechnic ejection separation concept of Long March 4's payload fairing. There is a correlation between the shock spectrum and the structure of the fairing. The spectrum is obtained by iterative computation and the separation track of the fairing is calculated. The results of the analysis are in good agreement with the test results.

  13. Targeting therapeutic liabilities engendered by PIK3R1 mutations for cancer treatment.

    PubMed

    Cheung, Lydia Wt; Mills, Gordon B

    2016-02-01

    The regulatory subunit of PI3K, p85α (encoded by PIK3R1), binds, stabilizes and inhibits the PI3K p110 catalytic subunit. Functional characterization of PIK3R1 mutations has identified not only hypomorphs with reduced inhibition of p110, but also hypomorphs and dominant negative mutants that disrupt a novel regulatory role of p85α on PTEN or neomorphs that activate unexpected signaling pathways. The diverse phenotypic spectrum of these PIK3R1 driver mutations underscores the need for different treatment strategies targeting tumors harboring these mutations. This article describes the functional consequences of the spectrum of PIK3R1 driver mutations and therapeutic liabilities they may engender. PMID:26807692

  14. Hanford environmental analytical methods (methods as of March 1990). Appendix A3-R

    SciTech Connect

    Goheen, S.C.; McCulloch, M.; Daniel, J.L.

    1993-05-01

    Techniques in use at the Hanford Reservation as of March, 1990 for the analysis of liquids and radioactive effluents are described. Limitations and applications of the techniques are included. This report is Appendix A3-R.

  15. PMD mitigation using 3R regeneration based on EAM with wavelength conversion

    NASA Astrophysics Data System (ADS)

    Huo, Li; Pan, Shilong; Yang, Yanfu; Lou, Caiyun; Gao, Yizhi

    2006-03-01

    Polarization mode dispersion (PMD) mitigation is performed using an optical 3R (re-amplification, re-shaping, re-timing) regenerator based on electro-absorption modulator (EAM) with wavelength conversion. System performance without and with 3R regeneration was separately studied by eye analysis and bit-error rate (BER) measurements. The signal quality was significantly improved by 3R regeneration under serious first order PMD (up to 40% of the bit interval) combined with second order PMD (up to about 520 ps2). The PMD mitigation margin of the proposed method is also investigated by measuring the sensitivity at BER 10^(-10). Further studies indicate that 3R regenerators have the potential to combat with the effects of PMD combined with polarization dependent loss (PDL) and polarization hole-burning (PHB).

  16. ILC2s and fungal allergy

    PubMed Central

    Kita, Hirohito

    2015-01-01

    Innate lymphoid cells (ILCs) have emerged recently as an important component of the immune system and the cell type that regulates mucosal immune responses and tissue homeostasis. Group 2 ILCs (ILC2s), a subset of ILCs, reside in various tissues and are characterized by their capacity to produce type 2 cytokines and tissue growth factors. These ILC2s play an important role in allergic immune responses by linking signals in the atmospheric environment to the immune system. Fungi are one of the major allergens associated with human asthma, and animal and in vitro models using the fungal allergens have provided significant information toward our understanding of the mechanisms of allergic disease. In mouse models of fungus-induced allergic airway inflammation, IL-33, IL-25, and TSLP are released by airway epithelial cells. Lung ILC2s that respond to these cytokines quickly produce a large quantity of type 2 cytokines, resulting in airway eosinophilia, mucus production, and airway hyperreactivity even in the absence of adaptive immune cells. Evidence also suggests that ILC2s interact with conventional immune cells, such as CD4+ T cells, and facilitate development of adaptive immune response and persistent airway inflammation. ILC2s are also present in respiratory mucosa in humans. Further investigations into the biology of ILC2s and their roles in the pathophysiology of allergic diseases will provide major conceptual advances in the field and may provide useful information toward development of new therapeutic strategies for patients. PMID:26117252

  17. ILC2s and fungal allergy.

    PubMed

    Kita, Hirohito

    2015-07-01

    Innate lymphoid cells (ILCs) have emerged recently as an important component of the immune system and the cell type that regulates mucosal immune responses and tissue homeostasis. Group 2 ILCs (ILC2s), a subset of ILCs, reside in various tissues and are characterized by their capacity to produce type 2 cytokines and tissue growth factors. These ILC2s play an important role in allergic immune responses by linking signals in the atmospheric environment to the immune system. Fungi are one of the major allergens associated with human asthma, and animal and in vitro models using the fungal allergens have provided significant information toward our understanding of the mechanisms of allergic disease. In mouse models of fungus-induced allergic airway inflammation, IL-33, IL-25, and TSLP are released by airway epithelial cells. Lung ILC2s that respond to these cytokines quickly produce a large quantity of type 2 cytokines, resulting in airway eosinophilia, mucus production, and airway hyperreactivity even in the absence of adaptive immune cells. Evidence also suggests that ILC2s interact with conventional immune cells, such as CD4(+) T cells, and facilitate development of adaptive immune response and persistent airway inflammation. ILC2s are also present in respiratory mucosa in humans. Further investigations into the biology of ILC2s and their roles in the pathophysiology of allergic diseases will provide major conceptual advances in the field and may provide useful information toward development of new therapeutic strategies for patients. PMID:26117252

  18. High-Performance Optical 3R Regeneration for Scalable Fiber Transmission System Applications

    NASA Astrophysics Data System (ADS)

    Zhu, Zuqing; Funabashi, Masaki; Pan, Zhong; Paraschis, Loukas; Harris, David L.; Ben Yoo, S. J.

    2007-02-01

    This paper proposes and demonstrates optical 3R regeneration techniques for high-performance and scalable 10-Gb/s transmission systems. The 3R structures rely on monolithically integrated all-active semiconductor optical amplifier-based Mach Zehnder interferometers (SOA-MZIs) for signal reshaping and optical narrowband filtering using a Fabry Pérot filter (FPF) for all-optical clock recovery. The experimental results indicate very stable operation and superior cascadability of the proposed optical 3R structure, allowing error-free and low-penalty 10-Gb/s [pseudorandom bit sequence (PRBS) 223 - 1] return-to-zero (RZ) transmission through a record distance of 1 250 000 km using 10 000 optical 3R stages. Clock-enhancement techniques using a SOA-MZI are then proposed to accommodate the clock performance degradations that arise from dispersion uncompensated transmission. Leveraging such clock-enhancement techniques, we experimentally demonstrate error-free 125 000-km RZ dispersion uncompensated transmission at 10 Gb/s (PRBS 223 - 1) using 1000 stages of optical 3R regenerators spaced by 125-km large-effective-area fiber spans. To evaluate the proposed optical 3R structures in a relatively realistic environment and to investigate the tradeoff between the cascadability and the spacing of the optical 3R, a fiber recirculation loop is set up with 264- and 462-km deployed fiber. The field-trial experiment achieves error-free 10-Gb/s RZ transmission using PRBS 223} - 1 through 264 000-km deployed fiber across 1000 stages of optical 3R regenerators spaced by 264-km spans.

  19. Effects of IP3R2 Receptor Deletion in the Ischemic Mouse Retina.

    PubMed

    Wagner, Lysann; Pannicke, Thomas; Frommherz, Ina; Sauer, Katja; Chen, Ju; Grosche, Antje

    2016-04-01

    Glial cells in the diseased nervous system undergo a process known as reactive gliosis. Gliosis of retinal Müller glial cells is characterized by an upregulation of glial fibrillary acidic protein and frequently by a reduction of inward K(+) current amplitudes. Purinergic signaling is assumed to be involved in gliotic processes. As previously shown, lack of the nucleotide receptor P2Y1 leads to an altered regulation of K(+) currents in Müller cells of the ischemic retina. Here, we asked first whether this effect is mediated by the IP3 receptor subtype 2 (IP3R2) known as the major downstream signaling target of P2Y1 in Müller cells. The second question was whether lack of IP3R2 affects neuronal survival in the control and ischemic retina. Ischemia was induced in wild type and IP3R2-deficient (IP 3 R2 (-/-)) mice by transient elevation of the intraocular pressure. Immunostaining and TUNEL labelling were used to quantify neuronal cell loss. The downregulation of inward K(+) currents in Müller cells from ischemic IP 3 R2 (-/-) retinae was less strong than in wild type animals. The reduction of the number of cells in the ganglion cell layer and of calretinin- and calbindin-positive cells 7 days after ischemia was similar in wild type and IP 3 R2 (-/-) mice. However, IP3R2 deficiency led to an increased number of TUNEL-positive cells in the outer nuclear layer at 1 day and to an enhanced postischemic loss of photoreceptors 7 days after ischemia. This implies that IP3R2 is involved in some but not all aspects of signaling in Müller cells after an ischemic insult. PMID:26446037

  20. SQ3R Doesn't Work--Or Does It?

    ERIC Educational Resources Information Center

    Kopfstein, Robert Wm.

    The SQ3R method has been the backbone of textbook reading strategies for over 20 years. However, research indicates that students--even though they know how to use the technique--do not apply it because they believe it is too involved and too time consuming. Theoretically, SQ3R is a sound technique based on current knowledge about brain functions,…

  1. ERP44 inhibits human lung cancer cell migration mainly via IP3R2

    PubMed Central

    Zhai, Kui; Chang, Yan; Yuan, Qi; Yao, Kai-Tai; Ji, Guangju

    2016-01-01

    Cancer cell migration is involved in tumour metastasis. However, the relationship between calcium signalling and cancer migration is not well elucidated. In this study, we used the human lung adenocarcinoma A549 cell line to examine the role of endoplasmic reticulum protein 44 (ERP44), which has been reported to regulate calcium release inside of the endoplasmic reticulum (ER), in cell migration. We found that the inositol 1,4,5-trisphosphate receptors (IP3Rs/ITPRs) inhibitor 2-APB significantly inhibited A549 cell migration by inhibiting cell polarization and pseudopodium protrusion, which suggests that Ca2+ is necessary for A549 cell migration. Similarly, the overexpression of ERP44 reduced intracellular Ca2+ release via IP3Rs, altered cell morphology and significantly inhibited the migration of A549 cells. These phenomena were primarily dependent on IP3R2 because wound healing in A549 cells with IP3R2 rather than IP3R1 or IP3R3 siRNA was markedly inhibited. Moreover, the overexpression of ERP44 did not affect the migration of the human neuroblastoma cell line SH-SY5Y, which mainly expresses IP3R1. Based on the above observations, we conclude that ERP44 regulates A549 cell migration mainly via an IP3R2-dependent pathway. PMID:27347718

  2. A potent antibrowning agent from pine needles of Cedrus deodara: 2R,3R-dihydromyricetin.

    PubMed

    Liang, Xue; Wu, Yan-Ping; Qiu, Jing-Hong; Zhong, Kai; Gao, Hong

    2014-09-01

    This article focuses on finding the novel antibrowning agents from the pine needles of Cedrus deodara and studying its antibrowning effect. By bioassay guide of tyrosinase inhibitory activity, the main active compound was isolated and purified from 50% methanol extract of pine needles of C. deodara through macroporous resin Diaion HP-20 column chromatography and high-performance liquid chromatography. Based on mass and nuclear magnetic resonance data, the active compound was identified as 2R,3R-dihydromyricetin, which showed the potent monophenolase and diphenolase inhibitory activities. Moreover, 2R,3R-dihydromyricetin exhibited a strong ABTS radical scavenging activity with a dose-dependent manner. The antibrowning efficacy of 2R,3R-dihydromyricetin was evaluated by monitoring the changes of L*, a*, and b* values and total color difference (△E) on fresh-cut apple slices. It was found that 2R,3R-dihydromyricetin was effective in inhibiting the browning of apple slices treated with a concentration as low as 0.05% at 25 °C for 24 h. Its antibrowning effect was significantly better than ascorbic acid (0.5%) alone. Furthermore, 2R,3R-dihydromyricetin showed a good synergistic antibrowning effect with ascorbic acid. This is the first report that 2R,3R-dihydromyricetin from pine needles of C. deodara may be used as a potential antibrowning agent in protecting against food browning. PMID:25163933

  3. Night eating and obesity in the EP3R-deficient mouse.

    PubMed

    Sanchez-Alavez, Manuel; Klein, Izabella; Brownell, Sara E; Tabarean, Iustin V; Davis, Christopher N; Conti, Bruno; Bartfai, Tamas

    2007-02-20

    Adult mice carrying a null mutation of the prostanoid receptor EP3R (EP3R(-/-) mice) exhibit increased frequency of feeding during the light cycle of the day and develop an obese phenotype under a normal fat diet fed ad libitum. EP3R(-/-) mice show increased motor activity, which is not sufficient to offset the increased feeding leading to increased body weight. Altered "nocturnal" activity and feeding behavior is present from a very early age and does not seem to require age-dependent factors for the development of obesity. Obesity in EP3R(-/-) mice is characterized by elevated leptin and insulin levels and >20% higher body weight compared with WT littermates. Abdominal and subcutaneous fat and increased liver weight account for the weight increase in EP3R(-/-) mice. These observations expand the roles of prostaglandin E(2) signaling in metabolic regulation beyond the reported stimulation of leptin release from adipose tissue to involve actions mediated by EP3R in the regulation of sleep architecture and feeding behavior. The findings add to the growing literature on links between inflammatory signaling and obesity. PMID:17307874

  4. Regulation of DCIS to invasive breast cancer progression by Singleminded-2s (SIM2s).

    PubMed

    Scribner, K C; Behbod, F; Porter, W W

    2013-05-23

    Singleminded-2s (SIM2s) is a member of the bHLH/PAS family of transcription factors and a key regulator of mammary epithelial cell differentiation. SIM2s is highly expressed in mammary epithelial cells and downregulated in human breast cancer. Loss of Sim2s causes aberrant mouse mammary ductal development, with features suggestive of malignant transformation, whereas overexpression of SIM2s promotes precocious alveolar differentiation in nulliparous mouse mammary glands, suggesting that SIM2s is required for establishing and enhancing mammary gland differentiation. To test the hypothesis that SIM2s regulates tumor cell differentiation, we analyzed SIM2s expression in human primary breast ductal carcinoma in situ (DCIS) samples and found that SIM2s is lost with progression from DCIS to invasive ductal cancer (IDC). Using a MCF10DCIS.COM progression model, we have shown that SIM2s expression is decreased in MCF10DCIS.COM cells compared with MCF10A cells, and reestablishment of SIM2s in MCF10DCIS.COM cells significantly inhibits growth and invasion both in vitro and in vivo. Analysis of SIM2s-MCF10DCIS.com tumors showed that SIM2s promoted a more differentiated tumor phenotype including the expression of a broad range of luminal markers (CSN2 (β-casein), CDH1 (E-cadherin), and KER18 (keratin-18)) and suppressed genes associated with stem cell maintenance and a basal phenotype (SMO (smoothened), p63, SLUG (snail-2), KER14 (keratin-14) and VIM (vimentin)). Furthermore, loss of SIM2s expression in MCF10DCIS.COM xenografts resulted in a more invasive phenotype and increased lung metastasis likely due to an increase in Hedgehog signaling and matrix metalloproteinase expression. Together, these exciting new data support a role for SIM2s in promoting human breast tumor differentiation and maintaining epithelial integrity. PMID:22777354

  5. Bulk superconductivity in novel Bi4O4S3 compound

    NASA Astrophysics Data System (ADS)

    Singh, Shiva; Husain, M.; Patnaik, S.; Awana, V.

    2013-03-01

    We report here synthesis and superconductivity in BiS2 based newly discovered Bi4O4S3 compound. The compound is synthesized through vacuum encapsulation technique and is contaminated with small impurities of Bi2S3 and Bi. The compound is crystallized in tetragonal I4/mmm space group. Bulk superconductivity with superconducting transition temperature (TC) of 4.4 K is confirmed by AC, DC magnetization and resistivity measurements. For further confirmation of intrinsic bulk superconductivity, we have heat treated Bi at same temperature and in similar condition. Bi is crystallized in rhombohedral R-3m space group (impurity phase Bi is also indexed in same space group) and is non-superconducting. This excludes any possibility of impurity driven superconductivity in the Bi4O4S3 compound. Isothermal magnetization (M-H) measurements indicated closed loops with clear signatures of flux pinning and irreversible behavior. The magneto-transport ρ (T , H) measurements showed a resistive broadening and decrease in TC (ρ = 0) to lower temperatures with increasing magnetic field. The extrapolated upper critical field Hc2(0) is around 31 kOe. In the normal state the ρ ~ T2 is not indicated. National Physical Laboratory (CSIR), New Delhi-110012, India

  6. Measurement of psi2S radiative decays.

    PubMed

    Ablikim, M; Bai, J Z; Ban, Y; Cai, X; Chen, H F; Chen, H S; Chen, H X; Chen, J C; Chen, Jin; Chen, Y B; Chu, Y P; Dai, Y S; Diao, L Y; Deng, Z Y; Dong, Q F; Du, S X; Fang, J; Fang, S S; Fu, C D; Gao, C S; Gao, Y N; Gu, S D; Gu, Y T; Guo, Y N; Guo, Z J; Harris, F A; He, K L; He, M; Heng, Y K; Hou, J; Hu, H M; Hu, J H; Hu, T; Huang, G S; Huang, X T; Ji, X B; Jiang, X S; Jiang, X Y; Jiao, J B; Jin, D P; Jin, S; Lai, Y F; Li, G; Li, H B; Li, J; Li, R Y; Li, S M; Li, W D; Li, W G; Li, X L; Li, X N; Li, X Q; Liang, Y F; Liao, H B; Liu, B J; Liu, C X; Liu, F; Liu, Fang; Liu, H H; Liu, H M; Liu, J; Liu, J B; Liu, J P; Liu, Jian Liu Q; Liu, R G; Liu, Z A; Lou, Y C; Lu, F; Lu, G R; Lu, J G; Luo, C L; Ma, F C; Ma, H L; Ma, L L; Ma, Q M; Mao, Z P; Mo, X H; Nie, J; Olsen, S L; Ping, R G; Qi, N D; Qin, H; Qiu, J F; Ren, Z Y; Rong, G; Ruan, X D; Shan, L Y; Shang, L; Shen, C P; Shen, D L; Shen, X Y; Sheng, H Y; Sun, H S; Sun, S S; Sun, Y Z; Sun, Z J; Tang, X; Tong, G L; Varner, G S; Wang, D Y; Wang, L; Wang, L L; Wang, L S; Wang, M; Wang, P; Wang, P L; Wang, Y F; Wang, Z; Wang, Z Y; Wang, Zheng; Wei, C L; Wei, D H; Weng, Y; Wu, N; Xia, X M; Xie, X X; Xu, G F; Xu, X P; Xu, Y; Yan, M L; Yang, H X; Yang, Y X; Ye, M H; Ye, Y X; Yu, G W; Yuan, C Z; Yuan, Y; Zang, S L; Zeng, Y; Zhang, B X; Zhang, B Y; Zhang, C C; Zhang, D H; Zhang, H Q; Zhang, H Y; Zhang, J W; Zhang, J Y; Zhang, S H; Zhang, X Y; Zhang, Yiyun; Zhang, Z X; Zhang, Z P; Zhao, D X; Zhao, J W; Zhao, M G; Zhao, P P; Zhao, W R; Zhao, Z G; Zheng, H Q; Zheng, J P; Zheng, Z P; Zhou, L; Zhu, K J; Zhu, Q M; Zhu, Y C; Zhu, Y S; Zhu, Z A; Zhuang, B A; Zhuang, X A; Zou, B S

    2007-07-01

    Using 14 x 10(6) psi(2S) events accumulated at the BESII detector, we report first measurements of branching fractions or upper limits for psi(2S) decays into gammapp, gamma2(pi+pi-), gammaKS0K+pi-+c.c., gammaK+K-pi+pi-, gammaK*0K-pi++c.c., gammaK*0K*0, gammapi+pi-pp, gamma2(K+K-), gamma3(pi+pi-), and gamma2(pi+pi-)K+K- with the invariant mass of hadrons below 2.9 GeV/c2. We also report branching fractions of psi(2S) decays into 2(pi+pi-)pi0, omegapi+pi-, omegaf2(1270), b1+/-pi-/+, and pi02(pi+pi-)K+K-. PMID:17678148

  7. Reduced susceptibility to induced seizures in the Neuroligin-3(R451C) mouse model of autism.

    PubMed

    Hill-Yardin, Elisa L; Argyropoulos, Andrew; Hosie, Suzanne; Rind, Gil; Anderson, Paul; Hannan, Anthony J; O'Brien, Terence J

    2015-03-01

    Epilepsy is a common comorbidity in patients with autism spectrum disorder (ASD) and several gene mutations are associated with both of these disorders. In order to determine whether a point mutation in the gene for the synaptic protein, Neuroligin-3 (Nlgn3, R451C), identified in patients with ASD alters seizure susceptibility, we administered the proconvulsant pentylenetetrazole (PTZ) to adult male Neuroligin-3(R451C) (NL3(R451C)) and wild type (WT) mice. It has previously been reported that NL3(R451C) mice show altered inhibitory GABAergic activity in brain regions relevant to epilepsy, including the hippocampus and somatosensory cortex. PTZ administration induces absence-seizures at low dose, and generalised convulsive seizures at higher dose. Susceptibility to absence seizures was examined by analysing the frequency and duration of spike-and-wave discharge (SWD) events and accompanying motor seizure activity induced by subcutaneous administration of low dosage (20 or 30mg/kg) PTZ. Susceptibility to generalised convulsive seizures was tested by measuring the response to high dosage (60mg/kg) PTZ using a modified Racine scale. There was no change in the number of SWD events exhibited by NL3(R451C) compared to WT mice following administration of both 20mg/kg PTZ (1.17±0.31 compared to 16.0±11.16 events/30min, NL3(R451C) versus WT, respectively) and 30mg/kg PTZ (7.5±6.54 compared with 27.8±19.9 events/30min, NL3(R451C) versus WT, respectively). NL3(R451C) mice were seizure resistant to generalised convulsive seizures induced by high dose PTZ compared to WT littermates (median latency to first >3s duration clonic seizure; 14.5min versus 7.25min, 95% CI: 1.625-2.375, p=0.0009, NL3(R451C) versus WT, respectively). These results indicate that the R451C mutation in the Nlgn3 gene, associated with ASD in humans, confers resistance to induced seizures, suggesting dysfunction of PTZ-sensitive GABAergic signalling in this mouse model of ASD. PMID:25592157

  8. Comparative enzymology of (2S,4R)4-fluoroglutamine and (2S,4R)4-fluoroglutamate

    PubMed Central

    Cooper, Arthur J. L.; Krasnikov, Boris F.; Pinto, John T.; Kung, Hank F.; Li, Jianyong; Ploessl, Karl

    2012-01-01

    Many cancer cells have a strong requirement for glutamine. As an aid for understanding this phenomenon the 18F-labeled 2S,4R stereoisomer of 4-fluoroglutamine [(2S,4R)4-FGln] was previously developed for in vivo positron emission tomography (PET). In the present work, comparative enzymological studies of unlabeled (2S,4R)4-FGln and its deamidated product (2S,4R)4-FGlu were conducted as an adjunct to these PET studies. Our findings are as follows: Rat kidney preparations catalyze the deamidation of (2S,4R)4-FGln. (2S,4R)4-FGln and (2S,4R)4-FGlu are substrates of various aminotransferases. (2S,4R)4-FGlu is a substrate of glutamate dehydrogenase, but not of sheep brain glutamine synthetase. The compound is, however, a strong inhibitor of this enzyme. Rat liver cytosolic fractions catalyze a γ-elimination reaction with (2S,4R)4-FGlu, generating α-ketoglutarate. Coupling of a deamidase reaction with this γ- elimination reaction provides an explanation for the previous detection of 18F− in tumors exposed to [18F](2S,4R)4-FGln. One enzyme contributing to this reaction was identified as alanine aminotransferase, which catalyzes competing γ-elimination and aminotransferase reactions with (2S,4R)4-FGlu. This appears to be the first description of an aminotransferase catalyzing a γ-elimination reaction. The present results demonstrate that (2S,4R)4-FGln and (2S,4R)4-FGlu are useful analogues for comparative studies of various glutamine- and glutamate-utilizing enzymes in normal and cancerous mammalian tissues, and suggest that tumors may metabolize (2S,4R)4-FGln in a generally similar fashion to glutamine. In plants, yeast and bacteria a major route for ammonia assimilation involves the consecutive action of glutamate synthase plus glutamine synthetase (glutamate synthase cycle). It is suggested that (2S,4R)4-FGln and (2S,4R)4-FGlu will be useful probes in studies of ammonia assimilation by the glutamate synthase pathway in these organisms. Finally, glutamine

  9. The ACTN3 R577X polymorphism is associated with muscle power in male Japanese athletes.

    PubMed

    Kikuchi, Naoki; Nakazato, Koichi; Min, Seok-ki; Ueda, Dai; Igawa, Shoji

    2014-07-01

    In this study, we investigated whether the ACTN3 R577X polymorphism is associated with muscular power in Japanese collegiate athletes by analyzing the mean and peak power results of a 30-second Wingate anaerobic test (WAnT) with respect to the ACTN3 R577X genotype in 253 Japanese athletes (144 men and 109 women). Each athlete performed a 30-second WAnT with a resistance equal to 7.5% of his or her body weight. Genotyping for the ACTN3 R577X (rs1815739) polymorphism was performed using the TaqMan approach. The ACTN3 R577X genotypes exhibited a Hardy-Weinberg equilibrium distribution in our population. The relative and absolute mean power results of the 30-second WAnT did not differ significantly among the genotypes. However, the relative peak power result of the WAnT was significantly higher in the R-allele-dominant model groups than in the XX group in male but not female athletes. These results suggest that the ACTN3 R allele is associated with the relative peak power during the WAnT in male Japanese collegiate athletes. PMID:24343324

  10. A mouse model for a partially inactive obesity-associated human MC3R variant

    PubMed Central

    Lee, Bonggi; Koo, Jashin; Yun Jun, Joo; Gavrilova, Oksana; Lee, Yongjun; Seo, Arnold Y.; Taylor-Douglas, Dezmond C.; Adler-Wailes, Diane C.; Chen, Faye; Gardner, Ryan; Koutzoumis, Dimitri; Sherafat Kazemzadeh, Roya; Roberson, Robin B.; Yanovski, Jack A.

    2016-01-01

    We previously reported children homozygous for two MC3R sequence variants (C17A+G241A) have greater fat mass than controls. Here we show, using homozygous knock-in mouse models in which we replace murine Mc3r with wild-type human (MC3RhWT/hWT) and double-mutant (C17A+G241A) human (MC3RhDM/hDM) MC3R, that MC3RhDM/hDM have greater weight and fat mass, increased energy intake and feeding efficiency, but reduced length and fat-free mass compared with MC3RhWT/hWT. MC3RhDM/hDM mice do not have increased adipose tissue inflammatory cell infiltration or greater expression of inflammatory markers despite their greater fat mass. Serum adiponectin levels are increased in MC3RhDM/hDM mice and MC3RhDM/hDM human subjects. MC3RhDM/hDM bone- and adipose tissue-derived mesenchymal stem cells (MSCs) differentiate into adipocytes that accumulate more triglyceride than MC3RhWT/hWT MSCs. MC3RhDM/hDM impacts nutrient partitioning to generate increased adipose tissue that appears metabolically healthy. These data confirm the importance of MC3R signalling in human metabolism and suggest a previously-unrecognized role for the MC3R in adipose tissue development. PMID:26818770

  11. Transcriptional repression by MYB3R proteins regulates plant organ growth

    PubMed Central

    Kobayashi, Kosuke; Suzuki, Toshiya; Iwata, Eriko; Nakamichi, Norihito; Suzuki, Takamasa; Chen, Poyu; Ohtani, Misato; Ishida, Takashi; Hosoya, Hanako; Müller, Sabine; Leviczky, Tünde; Pettkó-Szandtner, Aladár; Darula, Zsuzsanna; Iwamoto, Akitoshi; Nomoto, Mika; Tada, Yasuomi; Higashiyama, Tetsuya; Demura, Taku; Doonan, John H; Hauser, Marie-Theres; Sugimoto, Keiko; Umeda, Masaaki; Magyar, Zoltán; Bögre, László; Ito, Masaki

    2015-01-01

    In multicellular organisms, temporal and spatial regulation of cell proliferation is central for generating organs with defined sizes and morphologies. For establishing and maintaining the post-mitotic quiescent state during cell differentiation, it is important to repress genes with mitotic functions. We found that three of the Arabidopsis MYB3R transcription factors synergistically maintain G2/M-specific genes repressed in post-mitotic cells and restrict the time window of mitotic gene expression in proliferating cells. The combined mutants of the three repressor-type MYB3R genes displayed long roots, enlarged leaves, embryos, and seeds. Genome-wide chromatin immunoprecipitation revealed that MYB3R3 binds to the promoters of G2/M-specific genes and to E2F target genes. MYB3R3 associates with the repressor-type E2F, E2FC, and the RETINOBLASTOMA RELATED proteins. In contrast, the activator MYB3R4 was in complex with E2FB in proliferating cells. With mass spectrometry and pairwise interaction assays, we identified some of the other conserved components of the multiprotein complexes, known as DREAM/dREAM in human and flies. In plants, these repressor complexes are important for periodic expression during cell cycle and to establish a post-mitotic quiescent state determining organ size. PMID:26069325

  12. The concerted contribution of the S4-S5 linker and the S6 segment to the modulation of a Kv channel by 1-alkanols.

    PubMed

    Bhattacharji, Aditya; Kaplan, Benjamin; Harris, Thanawath; Qu, Xiaoguang; Germann, Markus W; Covarrubias, Manuel

    2006-11-01

    Gating of voltage-gated K(+) channels (K(v) channels) depends on the electromechanical coupling between the voltage sensor and activation gate. The main activation gate of K(v) channels involves the COOH-terminal section of the S6 segment (S6-b) and the S4-S5 linker at the intracellular mouth of the pore. In this study, we have expanded our earlier work to probe the concerted contribution of these regions to the putative amphipathic 1-alkanol site in the Shaw2 K(+) channel. In the S4-S5 linker, we found a direct energetic correlation between alpha-helical propensity and the inhibition of the Shaw2 channel by 1-butanol. Spectroscopic structural analyses of the S4-S5 linker supported this correlation. Furthermore, the analysis of chimeric Shaw2 and K(v)3.4 channels that exchanged their corresponding S4-S5 linkers showed that the potentiation induced by 1-butanol depends on the combination of a single mutation in the S6 PVPV motif (PVAV) and the presence of the Shaw2 S4-S5 linker. Then, using tandem-heterodimer subunits, we determined that this potentiation also depends on the number of S4-S5 linkers and PVAV mutations in the K(v) channel tetramer. Consistent with the critical contribution of the Shaw2 S4-S5 linker, the equivalent PVAV mutation in certain mammalian K(v) channels with divergent S4-S5 linkers conferred weak potentiation by 1-butanol. Overall, these results suggest that 1-alkanol action in Shaw2 channels depends on interactions involving the S4-S5 linker and the S6-b segment. Therefore, we propose that amphiphilic general anesthetic agents such as 1-alkanols may modulate gating of the Shaw2 K(+) channel by an interaction with its activation gate. PMID:16887933

  13. Structural and electronic features of binary Li2S-P2S5 glasses

    NASA Astrophysics Data System (ADS)

    Ohara, Koji; Mitsui, Akio; Mori, Masahiro; Onodera, Yohei; Shiotani, Shinya; Koyama, Yukinori; Orikasa, Yuki; Murakami, Miwa; Shimoda, Keiji; Mori, Kazuhiro; Fukunaga, Toshiharu; Arai, Hajime; Uchimoto, Yoshiharu; Ogumi, Zempachi

    2016-02-01

    The atomic and electronic structures of binary Li2S-P2S5 glasses used as solid electrolytes are modeled by a combination of density functional theory (DFT) and reverse Monte Carlo (RMC) simulation using synchrotron X-ray diffraction, neutron diffraction, and Raman spectroscopy data. The ratio of PSx polyhedral anions based on the Raman spectroscopic results is reflected in the glassy structures of the 67Li2S-33P2S5, 70Li2S-30P2S5, and 75Li2S-25P2S5 glasses, and the plausible structures represent the lithium ion distributions around them. It is found that the edge sharing between PSx and LiSy polyhedra increases at a high Li2S content, and the free volume around PSx polyhedra decreases. It is conjectured that Li+ ions around the face of PSx polyhedra are clearly affected by the polarization of anions. The electronic structure of the DFT/RMC model suggests that the electron transfer between the P ion and the bridging sulfur (BS) ion weakens the positive charge of the P ion in the P2S7 anions. The P2S7 anions of the weak electrostatic repulsion would causes it to more strongly attract Li+ ions than the PS4 and P2S6 anions, and suppress the lithium ionic conduction. Thus, the control of the edge sharing between PSx and LiSy polyhedra without the electron transfer between the P ion and the BS ion is expected to facilitate lithium ionic conduction in the above solid electrolytes.

  14. Structural and electronic features of binary Li2S-P2S5 glasses

    PubMed Central

    Ohara, Koji; Mitsui, Akio; Mori, Masahiro; Onodera, Yohei; Shiotani, Shinya; Koyama, Yukinori; Orikasa, Yuki; Murakami, Miwa; Shimoda, Keiji; Mori, Kazuhiro; Fukunaga, Toshiharu; Arai, Hajime; Uchimoto, Yoshiharu; Ogumi, Zempachi

    2016-01-01

    The atomic and electronic structures of binary Li2S-P2S5 glasses used as solid electrolytes are modeled by a combination of density functional theory (DFT) and reverse Monte Carlo (RMC) simulation using synchrotron X-ray diffraction, neutron diffraction, and Raman spectroscopy data. The ratio of PSx polyhedral anions based on the Raman spectroscopic results is reflected in the glassy structures of the 67Li2S-33P2S5, 70Li2S-30P2S5, and 75Li2S-25P2S5 glasses, and the plausible structures represent the lithium ion distributions around them. It is found that the edge sharing between PSx and LiSy polyhedra increases at a high Li2S content, and the free volume around PSx polyhedra decreases. It is conjectured that Li+ ions around the face of PSx polyhedra are clearly affected by the polarization of anions. The electronic structure of the DFT/RMC model suggests that the electron transfer between the P ion and the bridging sulfur (BS) ion weakens the positive charge of the P ion in the P2S7 anions. The P2S7 anions of the weak electrostatic repulsion would causes it to more strongly attract Li+ ions than the PS4 and P2S6 anions, and suppress the lithium ionic conduction. Thus, the control of the edge sharing between PSx and LiSy polyhedra without the electron transfer between the P ion and the BS ion is expected to facilitate lithium ionic conduction in the above solid electrolytes. PMID:26892385

  15. Organising evidence for environmental management decisions: a '4S' hierarchy.

    PubMed

    Dicks, Lynn V; Walsh, Jessica C; Sutherland, William J

    2014-11-01

    Making decisions informed by the best-available science is an objective for many organisations managing the environment or natural resources. Yet, available science is still not widely used in environmental policy and practice. We describe a '4S' hierarchy for organising relevant science to inform decisions. This hierarchy has already revolutionised clinical practice. It is beginning to emerge for environmental management, although all four levels need substantial development before environmental decision-makers can reliably and efficiently find the evidence they need. We expose common bypass routes that currently lead to poor or biased representation of scientific knowledge. We argue that the least developed level of the hierarchy is that closest to decision-makers, placing synthesised scientific knowledge into environmental decision support systems. PMID:25280588

  16. No association between ACTN3 R577X polymorphism and elite judo athletic status.

    PubMed

    Rodríguez-Romo, Gabriel; Yvert, Thomas; de Diego, Alfonso; Santiago, Catalina; Díaz de Durana, Alfonso L; Carratalá, Vicente; Garatachea, Nuria; Lucia, Alejandro

    2013-09-01

    The authors compared ACTN3 R577X genotype and allele frequencies in the majority of all-time-best Spanish judo male athletes (n = 108) and 343 ethnically matched nonathletic men. No between-groups differences were found in allele (P = .077) or genotype distributions (P = .178). Thus, the R577X polymorphism was not significantly associated with the status of being an elite judo athlete, at least in the Spanish population. The contribution of genetics to sports-related phenotype traits is undeniable with some genotypes, of which ACTN3 R577X is currently the leading candidate, partly distinguishing individuals predisposed to either endurance or power sports. However, few athletic events can be categorized as purely power or endurance based. Although genetic testing (ie, for ACTN3 R577X) is already being marketed to predict sports talent and potential of young children, its usefulness is still questionable, at least in competitive judo. PMID:23348074

  17. The acetyllysine reader BRD3R promotes human nuclear reprogramming and regulates mitosis

    PubMed Central

    Shao, Zhicheng; Zhang, Ruowen; Khodadadi-Jamayran, Alireza; Chen, Bo; Crowley, Michael R.; Festok, Muhamad A.; Crossman, David K.; Townes, Tim M.; Hu, Kejin

    2016-01-01

    It is well known that both recipient cells and donor nuclei demonstrate a mitotic advantage as observed in the traditional reprogramming with somatic cell nuclear transfer (SCNT). However, it is not known whether a specific mitotic factor plays a critical role in reprogramming. Here we identify an isoform of human bromodomain-containing 3 (BRD3), BRD3R (BRD3 with Reprogramming activity), as a reprogramming factor. BRD3R positively regulates mitosis during reprogramming, upregulates a large set of mitotic genes at early stages of reprogramming, and associates with mitotic chromatin. Interestingly, a set of the mitotic genes upregulated by BRD3R constitutes a pluripotent molecular signature. The two BRD3 isoforms display differential binding to acetylated histones. Our results suggest a molecular interpretation for the mitotic advantage in reprogramming and show that mitosis may be a driving force of reprogramming. PMID:26947130

  18. The acetyllysine reader BRD3R promotes human nuclear reprogramming and regulates mitosis.

    PubMed

    Shao, Zhicheng; Zhang, Ruowen; Khodadadi-Jamayran, Alireza; Chen, Bo; Crowley, Michael R; Festok, Muhamad A; Crossman, David K; Townes, Tim M; Hu, Kejin

    2016-01-01

    It is well known that both recipient cells and donor nuclei demonstrate a mitotic advantage as observed in the traditional reprogramming with somatic cell nuclear transfer (SCNT). However, it is not known whether a specific mitotic factor plays a critical role in reprogramming. Here we identify an isoform of human bromodomain-containing 3 (BRD3), BRD3R (BRD3 with Reprogramming activity), as a reprogramming factor. BRD3R positively regulates mitosis during reprogramming, upregulates a large set of mitotic genes at early stages of reprogramming, and associates with mitotic chromatin. Interestingly, a set of the mitotic genes upregulated by BRD3R constitutes a pluripotent molecular signature. The two BRD3 isoforms display differential binding to acetylated histones. Our results suggest a molecular interpretation for the mitotic advantage in reprogramming and show that mitosis may be a driving force of reprogramming. PMID:26947130

  19. Synthesis, crystal and electronic structure, and optical property of the pentanary chalcohalide Ba3KSb4S9Cl

    NASA Astrophysics Data System (ADS)

    Zhao, Hua-Jun; Liu, Peng-Fei

    2015-12-01

    The pentanary chalcohalide Ba3KSb4S9Cl has been prepared from stoichiometric mixtures of KCl, Ba, Sb, and S in an evacuated silica tube, which is the first example of chalcohalides in the pentanary A/Ae/Sb/Q/X (A=alkali metal; Ae=alkaline-earth metal; Q=S, Se, Te; X=F, Cl, Br, I) system. This material crystallize in the Pnnm space group and its new structure type comprises one-dimensional (1D) [Sb3S7]5- chains running down the [001] direction separated by isolated dimeric Sb2S4 polyhedra, Ba2+, K+, and Cl-, respectively. The optical gap of 1.99 eV for Ba3KSb4S9Cl was deduced from the UV/vis reflectance spectroscopy and DFT study indicates a indirect band gap with an electronic transfer excitation of S 3p to Sb 5p orbital electrons.

  20. MAGI2/S-SCAM outside brain.

    PubMed

    Nagashima, Shunta; Kodaka, Manami; Iwasa, Hiroaki; Hata, Yutaka

    2015-04-01

    Membrane-associated guanylate kinase with an inverted arrangement of protein-protein interaction domains (MAGI)2 (also called synaptic scaffolding molecule (S-SCAM), atrophin-1-interacting protein 1, activin receptor-interacting protein 1) is a scaffold protein that binds a wide variety of receptors, cell adhesion molecules and signalling molecules. It also interacts with other scaffold proteins and adaptors, and forms a protein network that supports cell junctions. As it is highly expressed in brain, the study on its roles in synaptic organization initially preceded. However, mounting evidence indicates that MAGI2/S-SCAM functions as a tumour suppressor and plays essential roles to maintain the integrity of cell structures in non-neuronal tissues. We review the articles regarding to MAGI2/S-SCAM outside brain and discuss future perspectives for the research of MAGI family proteins. PMID:25637633

  1. Remove H/sub 2/S selectively

    SciTech Connect

    Mortko, R.A.

    1984-06-01

    Innovative Selexol process schemes improve H/sub 2/S selectivity and overall CO/sub 2/ recovery for enhanced oil recovery (EOR). Two such schemes, based on use of the Selexol Process show very good economics versus a conventional configuration even at modest CO/sub 2/ product values. These alternate schemes offer two different approaches to enhancing selectivity. One approach illustrates the tremendous effect on plant economics resulting from a small increase in CO/sub 2/ recovery. The other illustrates that CO/sub 2/ recovery levels approaching 99% are not only technically feasible but also economically viable even at very modest CO/sub 2/ product values. The feed gas chosen for evaluation is a typical southwestern Wyoming sour natural gas containing nearly 66% CO/sub 2/, 5% H/sub 2/S, and approximately 8% nitrogen with no hydrocarbons other than methane. Desired products are CO/sub 2/ for use in EOR, H/sub 2/S for sulfur recovery and methane as a product sales gas. Excess nitrogen in the methane sales gas stream is rejected to atmosphere. The Selexol Solvent Process is an excellent choice for treating this gas considering the need for selective acid gas removal, the high acid gas partial pressures and the absence of any ''heavy ends'' in the feed gas.

  2. Benefits of Student-Generated Note Packets: A Preliminary Investigation of SQ3R Implementation

    ERIC Educational Resources Information Center

    Carlston, David L.

    2011-01-01

    Minimal research to date has evaluated the impact of Survey-Question-Read-Recite-Review (SQ3R) implementation (i.e., surveying prior to reading, generating questions, reading to answer said questions, reciting, and reviewing information) on content retention and student performance. Existing research is anecdotal or lacks ecological validity. The…

  3. Comparison of ICD-10 and DC: 0-3R Diagnoses in Infants, Toddlers and Preschoolers

    ERIC Educational Resources Information Center

    Equit, Monika; Paulus, Frank; Fuhrmann, Pia; Niemczyk, Justine; von Gontard, Alexander

    2011-01-01

    The purpose of this study was to analyze and compare diagnoses of patients from a special outpatient department for infants, toddlers and preschoolers. Specifically, overlap, age and gender differences according to the two classification systems DC: 0-3R and ICD-10 were examined. 299 consecutive children aged 0-5;11 years received both ICD-10 and…

  4. A Counterpart of the Wadati-Konno-Ichikawa Soliton Hierarchy Associated with so(3,R)

    NASA Astrophysics Data System (ADS)

    Ma, Wen-Xiu; Manukure, Solomon; Zheng, Hong-Chan

    2014-09-01

    A counterpart of the Wadati-Konno-Ichikawa (WKI) soliton hierarchy, associated with so(3;R), is presented through the zero curvature formulation. Its spectral matrix is defined by the same linear combination of basis vectors as the WKI one, and its Hamiltonian structures yielding Liouville integrability are furnished by the trace identity

  5. The 3C3R Model: A Conceptual Framework for Designing Problems in PBL

    ERIC Educational Resources Information Center

    Hung, Woei

    2006-01-01

    Well-designed problems are crucial for the success of problem-based learning (PBL). Previous discussions about designing problems for PBL have been rather general and inadequate in guiding educators and practitioners to design effective PBL problems. This paper introduces the 3C3R PBL problem design model as a conceptual framework for…

  6. SOAR versus SQ3R: A Test of Two Study Systems

    ERIC Educational Resources Information Center

    Jairam, Dharma; Kiewra, Kenneth A.; Rogers-Kasson, Sarah; Patterson-Hazley, Melissa; Marxhausen, Kim

    2014-01-01

    Although researchers have long investigated ways to improve study habits and raise achievement, few studies compare study strategy systems with one another. No study to date has compared the long popular SQ3R (Survey, Question, Read, Recite, Review) system with the more modern SOAR (Select, Organize, Associate, Regulate) system. This study…

  7. 32 CFR Appendix E to Part 623 - Surety Bond (DA Form 4881-3-R)

    Code of Federal Regulations, 2010 CFR

    2010-07-01

    ... 32 National Defense 3 2010-07-01 2010-07-01 true Surety Bond (DA Form 4881-3-R) E Appendix E to Part 623 National Defense Department of Defense (Continued) DEPARTMENT OF THE ARMY SUPPLIES AND EQUIPMENT LOAN OF ARMY MATERIEL Pt. 623, App. E Appendix E to Part 623—Surety Bond (DA Form...

  8. OMAC4S- Open Modular Avionics for Space Applications

    NASA Astrophysics Data System (ADS)

    Herpel, H.-J.; Willich, G.; Vogel, T.; Schuettauf, A.; Pletner, S.; Schoen, F.; Fidi, C.; Loetzke, M.; Dittrich, L.; Schuelke, P.; Wolf, T.

    2013-08-01

    Today's spacecraft avionics architecture is characterised by a broad variety of processing modules, operating systems and interfaces for exchanging data between different processing modules. The software that implements most of the satellite functionality has to deal with this fact and is one of the reasons why software has become one of the major cost drivers in satellite projects. Similar problems have triggered developments in other industrial domains like AUTOSAR in the automotive area or Integrated Modular Architecture (IMA) in the aerospace industry [8]. All these initiatives are based on the definition of standards for computing platforms and the interfaces between these platforms. The goals of the Open Modular Avionics Architecture for Space Applications (OMAC4S) initiative started by Astrium, Fraunhofer FOKUS, STI, SYSGO and TTTech are to outline a solution that helps to reduce complexity and costs for space avionics significantly. This initiative is partly funded by the German national space agency (DLR) through the project On-Board Computer System Architecture (OBC-SA). In this paper we describe how standardization and the usage of already proven technologies from other industrial domains will help to limit the effect of the software development on schedule and costs of satellite projects. In addition we will demonstrate a migration path to make these technologies available for space applications.

  9. The ACTN3 R577X genotype is associated with muscle function in a Japanese population.

    PubMed

    Kikuchi, Naoki; Yoshida, Shou; Min, Seok-ki; Lee, Kihyuk; Sakamaki-Sunaga, Mikako; Okamoto, Takanobu; Nakazato, Koichi

    2015-04-01

    Homozygosity for the common nonsense polymorphism R577X in the α-actinin-3 gene (ACTN3) causes complete α-actinin-3 deficiency in fast-twitch skeletal muscle fibers. This study investigated whether the ACTN3 R577X polymorphism affects fitness status using a battery of tests in a large Japanese cohort. In the present study, 1227 subjects (age: 25-85 years) were genotyped for the ACTN3 R577X polymorphism (rs1815739) using a TaqMan SNP genotyping assay (Applied Biosystems). All subjects were divided into 2 groups based on their age (<55 years and ≥55 years). All subjects completed a questionnaire about exercise habits and were subjected to a battery of tests to assess their fitness status (including grip strength test, chair stand test, and 8-foot walking test). A significant association between the ACTN3 R577X genotype and chair stand test performance was observed in the group of men ≥55 using ANCOVA adjusted for age and exercise habits (p = 0.036). The ACTN3 R577X genotype accounted for 2.5% of the variability in the results of the chair stand test among men in the ≥55 age group. Moreover, for the ≥55 age group, performance in the chair stand test was lower among those with the XX genotype than among those with the RR genotype (p = 0.024) or RX genotype (p = 0.005), unlike results for the <55 age group. No significant difference was noted for hand grip strength or 8-foot walking time. Thus, our results suggest that the ACTN3 R577X genotype is associated with lower-extremity muscle function in the Japanese population. PMID:25761735

  10. Inositol 1,4,5-trisphosphate receptor type II (InsP3R-II) is reduced in obese mice, but metabolic homeostasis is preserved in mice lacking InsP3R-II

    PubMed Central

    Feriod, Colleen N.; Nguyen, Lily; Jurczak, Michael J.; Kruglov, Emma A.; Nathanson, Michael H.; Shulman, Gerald I.; Bennett, Anton M.

    2014-01-01

    Inositol 1,4,5-trisphosphate receptor type II (InsP3R-II) is the most prevalent isoform of the InsP3R in hepatocytes and is concentrated under the canalicular membrane, where it plays an important role in bile secretion. We hypothesized that altered calcium (Ca2+) signaling may be involved in metabolic dysfunction, as InsP3R-mediated Ca2+ signals have been implicated in the regulation of hepatic glucose homeostasis. Here, we find that InsP3R-II, but not InsP3R-I, is reduced in the livers of obese mice. In our investigation of the functional consequences of InsP3R-II deficiency, we found that organic anion secretion at the canalicular membrane and Ca2+ signals were impaired. However, mice lacking InsP3R-II showed no deficits in energy balance, glucose production, glucose tolerance, or susceptibility to hepatic steatosis. Thus, our results suggest that reduced InsP3R-II expression is not sufficient to account for any disruptions in metabolic homeostasis that are observed in mouse models of obesity. We conclude that metabolic homeostasis is maintained independently of InsP3R-II. Loss of InsP3R-II does impair secretion of bile components; therefore, we suggest that conditions of obesity would lead to a decrease in this Ca2+-sensitive process. PMID:25315698

  11. Nitric oxide reactivity of [2Fe-2S] clusters leading to H2S generation.

    PubMed

    Tran, Camly T; Williard, Paul G; Kim, Eunsuk

    2014-08-27

    The crosstalk between two biologically important signaling molecules, nitric oxide (NO) and hydrogen sulfide (H2S), proceeds via elusive mechanism(s). Herein we report the formation of H2S by the action of NO on synthetic [2Fe-2S] clusters when the reaction environment is capable of providing a formal H(•) (e(-)/H(+)). Nitrosylation of (NEt4)2[Fe2S2(SPh)4] (1) in the presence of PhSH or (t)Bu3PhOH results in the formation of (NEt4)[Fe(NO)2(SPh)2] (2) and H2S with the concomitant generation of PhSSPh or (t)Bu3PhO(•). The amount of H2S generated is dependent on the electronic environment of the [2Fe-2S] cluster as well as the type of H(•) donor. Employment of clusters with electron-donating groups or H(•) donors from thiols leads to a larger amount of H2S evolution. The 1/NO reaction in the presence of PhSH exhibits biphasic decay kinetics with no deuterium kinetic isotope effect upon PhSD substitution. However, the rates of decay increase significantly with the use of 4-MeO-PhSH or 4-Me-PhSH in place of PhSH. These results provide the first chemical evidence to suggest that [Fe-S] clusters are likely to be a site for the crosstalk between NO and H2S in biology. PMID:25113815

  12. QI2S - Quick Image Interpretation System

    NASA Astrophysics Data System (ADS)

    Naghmouchi, Jamin; Aviely, Peleg; Ginosar, Ran; Ober, Giovanna; Bischoff, Ole; Nadler, Ron; Guiser, David; Citroen, Meira; Freddi, Riccardo; Berekovic, Mladen

    2015-09-01

    The evolution of the Earth Observation mission will be driven by many factors, and the deveploment of new processing paradigms to facilitate data downlink, handling and storage will be a key factor. Next generation EO satellites will generate a great amount of data at a very high data rate, both radar and optical. Real-time onboard processing can be the solution to reduce data downlink and management on ground. Radiometric, geometric, and atmospheric corrections of EO data as well as material/object detection in addition to the well-known needs for image compression and signal processing can be performed directly on board and the aim of QI2S project is to demonstrate this. QI2S, a concept prototype system for novel onboard image processing and image interpretation which has been designed, developed and validated in the framework of an EU FP7 project, targets these needs and makes a significant step towards exceeding current roadmaps of leading space agencies for future payload processors. The QI2S system features multiple chip components of the RC64, a novel rad-hard 64-core signal processing chip, which targets DSP performance of 75 GMACs (16bit), 150 GOPS and 38 single precision GFLOPS while dissipating less than 10 Watts. It integrates advanced DSP cores with a multibank shared memory and a hardware scheduler, also supporting DDR2/3 memory and twelve 3.125 Gbps full duplex high-speed serial links using SpaceFibre and other protocols. The processor is being developed within the European FP7 Framework Program and will be qualified to the highest space standards.

  13. Zeaxanthin ([3R,3'R]-beta, beta-carotene-3-3'diol) as a resonance Raman and visible absorption probe of membrane structure.

    PubMed Central

    Mendelsohn, R; Van Holten, R W

    1979-01-01

    When zeaxanthin ([3R,3R']-beta, beta-carotene-3,3'diol) is inserted into phospholipid dispersions and the latter heated through their gel-liquid crystal phase transitions, large changes are noted in the resonance Raman and absorption spectra of the carotenoid molecule. By analogy with the data of Carey and co-workers (J. Raman Spectrosc. 6:282) who studied the aggregation of zeaxanthin in acetone-water solutions, it is suggested that the carotenoid aggregates in the phospholipid gel state while forming a monomer in liquid crystal phases. The alterations in both the visible absorption and resonance Raman data have been used to monitor phospholipid phase behavior in dipalmitoylphosphatidylcholine and distearoylphosphatidylcholine, (DSPC) one-component systems and binary mixtures. The phase diagram obtained for the binary system, as constructed from visible absorption and resonance Raman data, is compared with that of Shimshick and McConnell (Biochemistry. 12:2351) obtained from electron spin resonance (ESR) studies. Although the agreement between absorption and ESR data is generally satisfactory, onset temperatures for phase separation at low DSPC mole fractions deduced from resonance Raman measurements are several degrees lower than those from the other methods. Nevertheless, the use of zeaxanthin as a resonance Raman and visible absorption probe behavior will be useful in some situations where ordinary Raman spectroscopic data cannot be obtained easily. The advantage of the resonance Raman approach is illustrated in a study of the phase behavior of a phospholipid extract of a cel- mutant of Neurospora crassa. A phase separation region is observed with onset and completion temperatures of -19 and -6 degrees C, respectively. PMID:162448

  14. Two X-ray pulsars: 2S 1145-619 and 1E 1145.1-6141. [indentified with imaging proportional counter

    NASA Technical Reports Server (NTRS)

    Lamb, R. C.; Markert, T. H.; Hartman, R. C.; Thompson, D. J.; Bignami, G. F.

    1980-01-01

    Observations from the Einstein observatory reveal a previously unreported source, 1e1145.1-6141, within 15 arcmin of 2s1145-619 and of comparable intensity during July 1979. Periodicity analysis of the data shows a 290 + or - 2s period for the 2s source and a 298 + or - 4s period for the lE source, confirming the previous Ariel V report of two periods in this range from this region of the sky.

  15. 3'-R/S-hydroxyvoacamine, a potent acetylcholinesterase inhibitor from Tabernaemontana divaricata.

    PubMed

    Chaiyana, Wantida; Schripsema, Jan; Ingkaninan, Kornkanok; Okonogi, Siriporn

    2013-04-15

    Guided by the acetylcholinesterase inhibiting activity, the bisindole alkaloid 3'-R/S-hydroxyvoacamine was isolated from a stem extract of Tabernaemontana divaricata, a plant used in Thailand in traditional rejuvenation remedies for improving the memory. The structure of the alkaloid was elucidated by extensive use of NMR spectroscopy and the complete assignment of the (1)H and (13)C NMR spectra is reported. The alkaloid acted as a non-competitive inhibitor against AChE with an IC50 value of 7.00±1.99 μM. An HPLC method was developed for the quantitative analysis of the AChE inhibitor. It suggested that there was 12.4% (w/w) of 3'-R/S-hydroxyvoacamine in the alkaloid enriched fraction of T. divaricata stem. PMID:23375813

  16. Validating Vegetable Production Unit (VPU) Plants, Protocols, Procedures and Requirements (P3R) using Currently Existing Flight Resources

    NASA Technical Reports Server (NTRS)

    Bingham, Gail; Bates, Scott; Bugbee, Bruce; Garland, Jay; Podolski, Igor; Levinskikh, Rita; Sychev, Vladimir; Gushin, Vadim

    2009-01-01

    Validating Vegetable Production Unit (VPU) Plants, Protocols, Procedures and Requirements (P3R) Using Currently Existing Flight Resources (Lada-VPU-P3R) is a study to advance the technology required for plant growth in microgravity and to research related food safety issues. Lada-VPU-P3R also investigates the non-nutritional value to the flight crew of developing plants on-orbit. The Lada-VPU-P3R uses the Lada hardware on the ISS and falls under a cooperative agreement between National Aeronautics and Space Administration (NASA) and the Russian Federal Space Association (FSA). Research Summary: Validating Vegetable Production Unit (VPU) Plants, Protocols, Procedures and Requirements (P3R) Using Currently Existing Flight Resources (Lada-VPU-P3R) will optimize hardware and

  17. ACTN3 R577X genotype is associated with sprinting in elite Japanese athletes.

    PubMed

    Mikami, E; Fuku, N; Murakami, H; Tsuchie, H; Takahashi, H; Ohiwa, N; Tanaka, H; Pitsiladis, Y P; Higuchi, M; Miyachi, M; Kawahara, T; Tanaka, M

    2014-02-01

    The ACTN3 R577X genotype has been found to associate with sprint/power phenotypes in all elite athlete cohorts investigated. This association has not been extensively studied in elite Asian athletes. The present study was undertaken to investigate the association between the ACTN3 R577X genotype and elite Japanese track and field athlete status. 299 elite Japanese track and field athletes (134 sprint/power athletes; 165 endurance/middle-power athletes) and 649 Japanese controls were genotyped for the ACTN3 R577X polymorphism. All athletes were of national or international level. Sprint/power athletes showed a higher frequency of RR + RX genotype than controls (111/134 [82.8%] vs. 478/649 [73.7%], P = 0.025 under the R-dominant model), while there was no significant difference between endurance/middle-power athletes and controls (126/165 [76.4%] vs. 478/649 [73.7%], P = 0.48 under the R-dominant model). Sprinters with the RR + RX genotype had significantly faster personal best times for the 100 m than those with XX genotype (10.42 ± 0.05 s vs. 10.64 ± 0.09 s, P = 0.042); no such association was found in the 400 m sprinters (47.02 ± 0.36 s vs. 47.56 ± 0.99 s, P = 0.62). ACTN3 R577X genotype is associated with sprint/power performance in elite Japanese track and field athletes, especially short sprint performance. PMID:23868678

  18. Simultaneous all-optical 3R regeneration scheme with improved scalability using TOAD

    NASA Astrophysics Data System (ADS)

    Huang, Yue-Kai; Glesk, Ivan; Shankar, Raji; Prucnal, Paul R.

    2006-10-01

    A novel re-timing, re-amplifying, and re-shaping (3R) regeneration system is proposed to process multiple WDM (wavelengthdivision-multiplexing) channels simultaneously. Its re-timing capability is investigated by both simulation and experiment with polarizationscrambling method at 10 Gb/s bit rate. Jitter tolerance up to 0.8 UIpp is demonstrated with BER improvement and floor breaking ability.

  19. The ACTN3 R577X Polymorphism across Three Groups of Elite Male European Athletes

    PubMed Central

    Eynon, Nir; Ruiz, Jonatan R.; Femia, Pedro; Pushkarev, Vladimir P.; Cieszczyk, Pawel; Maciejewska-Karlowska, Agnieszka; Sawczuk, Marek; Dyatlov, Dmitry A.; Lekontsev, Evgeny V.; Kulikov, Leonid M.; Birk, Ruth

    2012-01-01

    The ACTN3 R577X polymorphism (rs1815739) is a strong candidate to influence elite athletic performance. Yet, controversy exists in the literature owing to between-studies differences in the ethnic background and sample size of the cohorts, the latter being usually low, which makes comparisons difficult. In this case:control genetic study we determined the association between elite athletic status and the ACTN3 R577X polymorphism within three cohorts of European Caucasian men, i.e. Spanish, Polish and Russian [633 cases (278 elite endurance and 355 power athletes), and 808 non-athletic controls]. The odds ratio (OR) of a power athlete harbouring the XX versus the RR genotype compared with sedentary controls was 0.54 [95% confidence interval (CI): 0.34–0.48; P = 0.006]. We also observed that the OR of an endurance athlete having the XX versus the RR genotype compared with power athletes was 1.88 (95%CI: 1.07–3.31; P = 0.028). In endurance athletes, the OR of a “world-class” competitor having the XX genotype versus the RR+RX genotype was 3.74 (95%CI: 1.08–12.94; P = 0.038) compared with those of a lower (“national”) competition level. No association (P>0.1) was noted between the ACTN3 R577X polymorphism and competition level (world-class versus national-level) in power athletes. Our data provide comprehensive support for the influence of the ACTN3 R577X polymorphism on elite athletic performance. PMID:22916217

  20. UTILITY ADVANCED TURBINE SYSTEMS (ATS) TECHNOLOGY READINESS TESTING PHASE 3 RESTRUCTURED (3R)

    SciTech Connect

    Unknown

    2000-03-17

    This scope document defines the work scope for accomplishing the design of the GE MS7001H and MS9001H (7H and 9H) combined-cycle power systems under the original ATS Phase 3 DOE Cooperative Agreement No. DE-FC21-95MC31176, and incorporates changes in scope required to convert Phase 3 to the ''restructured'' Phase 3R as defined in Amendment A012 to the Cooperative Agreement.

  1. Simple Method to Genotype the ACTN3 r577x Polymorphism.

    PubMed

    Schadock, Ines; Schneider, Augusto; Silva, Elton Dias; Buchweitz, Marcia Rubia Duarte; Correa, Marcio Nunes; Pesquero, Joao Bosco; Paredes-Gamero, Edgar Julian; Araujo, Ronaldo Carvalho; Barros, Carlos Castilho

    2015-05-01

    The alpha-actinin-3 r577x polymorphism (rs1815739) is one of the most important polymorphisms associated with athletic performance. This single-nucleotide mutation leads to a premature stop codon, resulting in a nonfunctional protein product. The presence of the dominant R allele is associated with full power skeletal muscle contraction. Homozygosity for the X allele is correlated with more efficient energy disposure. Restriction fragment length polymorphism and real-time polymerase chain reaction (PCR) are the standard methods used to genotype this polymorphism, but they are expensive and require special equipments. Here, we present a simple and cost-efficient method to genotype the ACTN3 r577x polymorphism by a single PCR. External primers yield a 690-bp product that indicates the template quality. Internal primers produce a 413-bp product if the R allele is present and a 318-bp product if the X allele is present. Our four-primer genotyping PCR was validated by the standard real-time PCR, generally used to genotype this single-nucleotide polymorphism, demonstrating the accuracy of this method. This protocol is perfect for small- or large-scale cohort genotyping of the ACTN3 r577x polymorphism. PMID:25831089

  2. Superconductivity in 3R-Ta1-xMxSe2 (M = W, Mo)

    NASA Astrophysics Data System (ADS)

    Luo, Huixia; Xie, Weiwei; Seibel, Elizabeth M.; Cava, R. J.

    2015-09-01

    The 3-layer rhombohedral (3R) polytype of TaSe2-xTex is known to display a superconducting transition temperature that is between 6 and 17 times higher than that of the two-layer hexagonal (2H) polytype. The remarkable difference in Tc, although clearly associated with a difference in polytype, could have been due to an electronic effect specific to the Te-Se substitution. Here we report that small amounts of Mo or W doping lead to a 2H to 3R polytype transition in Ta1-xMoxSe2 and Ta1-xWxSe2. The 3R polytype materials are again found to have substantially higher Tc (~2 K for Ta0.9W0.1Se2 and Ta0.9Mo0.1Se2) than the 2H material (0.15 K), eliminating the possibility that any special characteristics of the Te/Se substitution are responsible for the dramatic difference in Tc. We infer that a three-layer stacking sequence is strongly preferred for superconductivity over a two-layer stacking sequence in the TaSe2 system.

  3. Metabolism of (Z)-(1R,3R)-Profluthrin in Rats.

    PubMed

    Abe, Jun; Nagahori, Hirohisa; Omori, Rie; Mikata, Kazuki; Kurosawa, Motohiro; Tomigahara, Yoshitaka; Isobe, Naohiko

    2015-10-01

    When [benzyl-α-(14)C]-labeled (Z)-(1R,3R)-profluthrin (2,3,5,6-tetrafluoro-4-methylbenzyl (Z)-(1R,3R)-2,2-dimethyl-3-(prop-1-enyl) cyclopropanecarboxylate, a newly developed pyrethroid) was administered orally to rats at 1 mg/kg, around 70% was absorbed, metabolized, and mainly excreted into urine within 48 h. Radioactivity in plasma reached Cmax at 6-8 h, and decreased (half-life; 37-52 h). A similar tendency was observed also in tissues. Absorption rate was slightly lower at high dose, while kinetics and distribution did not change. Eight metabolites were detected in urine and one in feces. Most of the (14)C in feces was unabsorbed (Z)-(1R,3R)-profluthrin. The main metabolic reactions were ester cleavage, hydroxylation of the methyl group on the C4-position of the benzene ring, and its glucuronidation or oxidation to carboxylic acid. Oxidation of the geminal dimethyl on the cyclopropane-C2 to carboxylic acid, oxidation followed by hydration of the propenyl double bond, and ω-oxidation to carboxylic acid and mercapturic acid conjugation of the benzyl alcohol were observed as minor reactions. PMID:26357989

  4. Pleiotropic effects of TaMYB3R1 on plant development and response to osmotic stress in transgenic Arabidopsis.

    PubMed

    Cai, Hongsheng; Tian, Shan; Dong, Hansong; Guo, Changhong

    2015-03-10

    In a previous study, we isolated and characterized TaMYB3R1, a MYB3R gene, from wheat (Triticum aestivum L.). In vitro assays showed that the TaMYB3R1 protein is localized to the nucleus, and functions as an MSA-binding transcriptional activator. Expression of TaMYB3R1 is induced by exogenous abscisic acid (ABA) and abiotic stress, which encouraged us to further investigate its function in planta. In the present study, we generated transgenic Arabidopsis plants overexpressing TaMYB3R1. Compared with wild-type plants, the transgenic lines produced more rosette leaves, and thus more inflorescences, but the plants showed delayed development at the reproductive stage. The TaMYB3R1 protein also functions in the osmotic stress response. Transgenic Arabidopsis plants showed enhanced tolerance to drought and salt stresses, and the tolerance phenotype was conveyed by limiting transpiration through increasing stomatal closure as well as reducing water loss. In addition, TaMYB3R1 influenced the expression of both ABA-dependent and ABA-independent responsive genes, implicating TaMYB3R1 in diverse osmotic stress-response mechanisms in Arabidopsis. Our study sheds light on novel functions of a plant MYB3R protein. PMID:25560188

  5. KCNC3R420H, a K+ Channel Mutation Causative in Spinocerebellar Ataxia 13 Displays Aberrant Intracellular Trafficking

    PubMed Central

    Gallego-Iradi, Carolina; Bickford, Justin S.; Khare, Swati; Hall, Alexis; Nick, Jerelyn A.; Salmasinia, Donya; Wawrowsky, Kolja; Bannykh, Serguei; Huynh, Duong P.; Rincon-Limas, Diego E.; Pulst, Stefan M.; Nick, Harry S.; Fernandez-Funez, Pedro; Waters, Michael F.

    2014-01-01

    Spinocerebellar ataxia 13 (SCA13) is an autosomal dominant disease resulting from mutations in KCNC3 (Kv3.3), a voltage-gated potassium channel. The KCNC3R420H mutation was first identified as causative for SCA13 in a four-generation Filipino kindred with over 20 affected individuals. Electrophysiological analyses in oocytes previously showed that this mutation did not lead to a functional channel and displayed a dominant negative phenotype. In an effort to identify the molecular basis of this allelic form of SCA13, we first determined that human KCNC3WT and KCNC3R420H display disparate posttranslational modifications, and the mutant protein has reduced complex glycan adducts. Immunohistochemical analyses demonstrated that KCNC3R420H was not properly trafficking to the plasma membrane and surface biotinylation demonstrated that KCNC3R420H exhibited only 24% as much surface expression as KCNC3WT. KCNC3R420H trafficked through the ER but was retained in the Golgi. KCNC3R420H expression results in altered Golgi and cellular morphology. Electron microscopy of KCNC3R420H localization further supports retention in the Golgi. These results are specific to the KCNC3R420H allele and provide new insight into the molecular basis of disease manifestation in SCA13. PMID:25152487

  6. 75 FR 3471 - International Conference on Harmonisation; Guidance on M3(R2) Nonclinical Safety Studies for the...

    Federal Register 2010, 2011, 2012, 2013, 2014

    2010-01-21

    ... HUMAN SERVICES Food and Drug Administration International Conference on Harmonisation; Guidance on M3(R2... Pharmaceuticals; Availability AGENCY: Food and Drug Administration, HHS. ACTION: Notice. SUMMARY: The Food and Drug Administration (FDA) is announcing the availability of a guidance entitled ``M3(R2)...

  7. Characterization of a flatworm inositol (1,4,5) trisphosphate receptor (IP3R) reveals a role in reproductive physiology

    PubMed Central

    Zhang, Dan; Liu, Xiaolong; Chan, John D.; Marchant, Jonathan S.

    2013-01-01

    Inositol 1,4,5-trisphosphate receptors (IP3Rs) are intracellular Ca2+channels that elevate cytoplasmic Ca2+ in response to the second messenger IP3. Here, we describe the identification and in vivo functional characterization of the planarian IP3R, the first intracellular Ca2+ channel to be defined in flatworms. A single IP3R gene in Dugesia japonica encoded a 2666 amino acid protein (Dj.IP3R) that shared well conserved structural features with vertebrate IP3R counterparts. Expression of an NH2-terminal Dj.IP3R region (amino acid residues 223–585) recovered high affinity 3H-IP3 binding (0.9 ± 0.1 nM) which was abolished by a single point mutation of an arginine residue (R495L) important for IP3 coordination. In situ hybridization revealed that Dj.IP3R mRNA was most strongly expressed in the pharynx and optical nerve system as well as the reproductive system in sexualized planarians. Consistent with this observed tissue distribution, in vivo RNAi of Dj.IP3R resulted in a decreased egg-laying behavior suggesting Dj.IP3R plays an upstream role in planarian reproductive physiology. PMID:23481272

  8. Association of the ACTN3 R577X Polymorphism in Polish Power-Orientated Athletes

    PubMed Central

    Cięszczyk, Paweł; Eider, Jerzy; Ostanek, Magdalena; Arczewska, Aleksandra; Leońska-Duniec, Agata; Sawczyn, Stanisław; Ficek, Krzysztof; Krupecki, Krzysztof

    2011-01-01

    Alpha-actinins are an ancient family of actin-binding proteins that play structural and regulatory roles in cytoskeletal organization. In skeletal muscle, α-actinin-3 protein is an important structural component of the Z disc, where it anchors actin thin filaments, helping to maintain the myofibrillar array. A common nonsense polymorphism in codon 577 of the ACTN3 gene (R577X) results in α-actinin-3 deficiency in XX homozygotes. Based on knowledge about the role of ACTN3 R557X polymorphism in skeletal muscle function, we postulated that the genetic polymorphism of ACTN3 could also improve sprint and power ability. We compared genotypic and allelic frequencies of the ACTN3 R557X polymorphism in two groups of men of the same Caucasian descent: 158 power-orientated athletes and 254 volunteers not involved in competitive sport. The genotype distribution in the group of power-oriented athletes showed significant differences (P=0.008) compared to controls. However, among the investigated subgroups of athletes, only the difference of ACTN3 R577X genotype between sprinters and controls reached statistical significance (P=0.041). The frequencies of the ACTN3 577X allele (30.69% vs. 40.35%; P=0.005) were significantly different in all athletes compared to controls. Our results support the hypothesis that the ACTN3 577XX allele may have some beneficial effect on sprint-power performance, because the ACTN3 XX genotype is significantly reduced in Polish power-oriented athletes compared to controls. This finding seems to be in agreement with previously reported case-control studies. However, ACTN3 polymorphism as a genetic marker for sport talent identification should be interpreted with great caution. PMID:23486986

  9. Callyazepin and (3R)-Methylazacyclodecane, Nitrogenous Macrocycles from a Callyspongia sp. Sponge.

    PubMed

    Kim, Chang-Kwon; Woo, Jung-Kyun; Lee, Yeon-Ju; Lee, Hyi-Seung; Sim, Chung J; Oh, Dong-Chan; Oh, Ki-Bong; Shin, Jongheon

    2016-04-22

    Callyazepin (1) and (3R)-methylazacyclodecane (2), nitrogenous macrocycles, were isolated from a tropical Callyspongia sp. sponge. The combined spectroscopic analyses revealed that the structure of 1 is a bicyclic azepane ammonium salt of a novel structural class derived from mixed biogenetic origins. The configuration of the whole molecule and the conformation of the formamide group were assigned by proton-proton coupling constants, a NOESY analysis, and the application of the phenylglycine methyl ester method. The structure of 2 was identified using combined spectroscopic analyses and ECD measurements. These compounds exhibited moderate cytotoxic activities against the K562 and A549 cell lines. PMID:27015002

  10. HOTAIR Promotes Proliferation, Migration, and Invasion of Ovarian Cancer SKOV3 Cells Through Regulating PIK3R3

    PubMed Central

    Dong, Lijun; Hu, Lina

    2016-01-01

    Background The aim of this study was to determine the effect on proliferation, migration, and invasion after silencing HOTAIR in ovarian cancer SKOV3 cells, and to elucidate the potential mechanism. Material/Methods We analyzed the mRNA expression level of HOTAIR and PIK3R3 in ovarian cancer SKOV3, OVCAR3, and A2780 cell lines. We analyzed the mRNA expression level of HOTAIR and PIK3R3 in ovarian SKOV3 after transection with miR-214 or miR-217. We analyzed the mRNA and protein expression level of PIK3R3 when silencing HOTAIR. We analyzed the expression of HOTAIR when silencing PIK3R3. We analyzed the proliferation, migration and invasion in ovarian cancer SKOV3 after silencing HOTAIR or PIK3R3. Results The expression of HOTAIR and PIK3R3 in ovarian SKOV3 and OVCAR3 was increased compared with A2780 cells (P<0.05). The mRNA level of HOTAIR and PIK3R3 in ovarian cancer SKOV3 cells was decreased when transected with miR-214 or miR-217 compared to negative control (p<0.05). The mRNA and protein level of PIK3R3 was decreased when HOTAIR was silenced and the mRNA level of HOTAIR was decreased when PIK3R3 was silenced (p<0.05). The proliferation, migration and invasion was decreased in ovarian SKOV3 when HOTAIR or PIK3R3 was silenced (p<0.05). Conclusions HOTAIR can promote proliferation, migration, and invasion in ovarian SKOV3 cells as a competing endogenous RNA. PMID:26826873

  11. Identification of a MYB3R gene involved in drought, salt and cold stress in wheat (Triticum aestivum L.).

    PubMed

    Cai, Hongsheng; Tian, Shan; Liu, Changlai; Dong, Hansong

    2011-10-10

    Abiotic stress seriously affects crop growth and productivity. To better understand the mechanisms plant uses to cope with drought, cold and salt stress, it is necessary to isolate and characterize important regulators response to these stresses. In this study, we cloned a MYB gene from wheat (Triticum aestivum L.) and designated it as TaMYB3R1 based on its conserved three repeats in MYB domain. The sequence of TaMYB3R1 protein shares high identity to other plant MYB3R proteins. Subcellular localization experiment in onion epidermal cells proved that TaMYB3R1 localized in the nucleus. Trans-activation essays in yeast cells confirmed that TaMYB3R1 was a transcriptional activator, and only C-terminal region was able to activate the expression of β-galactosidase. DNA-binding test showed the MSA cis element-binding activity of TaMYB3R1. After exogenous application of phytohormone ABA, the expression of TaMYB3R1 was induced, and its transcripts accumulated up to 24h; this is also the case for MeJA treatment, but after it peaked at 4h, it decreased to low levels. However, either SA or ET had no obvious effect on the expression of TaMYB3R1. Furthermore, the TaMYB3R1 was initially expressed at low levels and was gradually induced following treatment with salt, and continued to increase up to 72 h. This was similar for the cold treatment. In contrast, the peak appeared at 6h of the PEG treatment, and then gradually decreased to low levels. Our results suggest that TaMYB3R1 is potentially involved in wheat response to drought, salt and cold stress. PMID:21763408

  12. Frataxin Accelerates [2Fe-2S] Cluster Formation on the Human Fe–S Assembly Complex

    PubMed Central

    Fox, Nicholas G.; Das, Deepika; Chakrabarti, Mrinmoy; Lindahl, Paul A.; Barondeau, David P.

    2015-01-01

    Iron–sulfur (Fe–S) clusters function as protein cofactors for a wide variety of critical cellular reactions. In human mitochondria, a core Fe–S assembly complex [called SDUF and composed of NFS1, ISD11, ISCU2, and frataxin (FXN) proteins] synthesizes Fe–S clusters from iron, cysteine sulfur, and reducing equivalents and then transfers these intact clusters to target proteins. In vitro assays have relied on reducing the complexity of this complicated Fe–S assembly process by using surrogate electron donor molecules and monitoring simplified reactions. Recent studies have concluded that FXN promotes the synthesis of [4Fe-4S] clusters on the mammalian Fe–S assembly complex. Here the kinetics of Fe–S synthesis reactions were determined using different electron donation systems and by monitoring the products with circular dichroism and absorbance spectroscopies. We discovered that common surrogate electron donor molecules intercepted Fe–S cluster intermediates and formed high-molecular weight species (HMWS). The HMWS are associated with iron, sulfide, and thiol-containing proteins and have properties of a heterogeneous solubilized mineral with spectroscopic properties remarkably reminiscent of those of [4Fe-4S] clusters. In contrast, reactions using physiological reagents revealed that FXN accelerates the formation of [2Fe-2S] clusters rather than [4Fe-4S] clusters as previously reported. In the preceding paper [Fox, N. G., et al. (2015) Biochemistry 54, DOI: 10.1021/bi5014485], [2Fe-2S] intermediates on the SDUF complex were shown to readily transfer to uncomplexed ISCU2 or apo acceptor proteins, depending on the reaction conditions. Our results indicate that FXN accelerates a rate-limiting sulfur transfer step in the synthesis of [2Fe-2S] clusters on the human Fe–S assembly complex. PMID:26016518

  13. Highly Selective Dopamine D3 Receptor (D3R) Antagonists and Partial Agonists Based on Eticlopride and the D3R Crystal Structure: New Leads for Opioid Dependence Treatment.

    PubMed

    Kumar, Vivek; Bonifazi, Alessandro; Ellenberger, Michael P; Keck, Thomas M; Pommier, Elie; Rais, Rana; Slusher, Barbara S; Gardner, Eliot; You, Zhi-Bing; Xi, Zheng-Xiong; Newman, Amy Hauck

    2016-08-25

    The recent and precipitous increase in opioid analgesic abuse and overdose has inspired investigation of the dopamine D3 receptor (D3R) as a target for therapeutic intervention. Metabolic instability or predicted toxicity has precluded successful translation of previously reported D3R-selective antagonists to clinical use for cocaine abuse. Herein, we report a series of novel and D3R crystal structure-guided 4-phenylpiperazines with exceptionally high D3R affinities and/or selectivities with varying efficacies. Lead compound 19 was selected based on its in vitro profile: D3R Ki = 6.84 nM, 1700-fold D3R versus D2R binding selectivity, and its metabolic stability in mouse microsomes. Compound 19 inhibited oxycodone-induced hyperlocomotion in mice and reduced oxycodone-induced locomotor sensitization. In addition, pretreatment with 19 also dose-dependently inhibited the acquisition of oxycodone-induced conditioned place preference (CPP) in rats. These findings support the D3R as a target for opioid dependence treatment and compound 19 as a new lead molecule for development. PMID:27508895

  14. The ACTN3 R577X Polymorphism Is Associated with Cardiometabolic Fitness in Healthy Young Adults.

    PubMed

    Deschamps, Chelsea L; Connors, Kimberly E; Klein, Matthias S; Johnsen, Virginia L; Shearer, Jane; Vogel, Hans J; Devaney, Joseph M; Gordish-Dressman, Heather; Many, Gina M; Barfield, Whitney; Hoffman, Eric P; Kraus, William E; Hittel, Dustin S

    2015-01-01

    Homozygosity for a premature stop codon (X) in the ACTN3 "sprinter" gene is common in humans despite the fact that it reduces muscle size, strength and power. Because of the close relationship between skeletal muscle function and cardiometabolic health we examined the influence of ACTN3 R577X polymorphism over cardiovascular and metabolic characteristics of young adults (n = 98 males, n = 102 females; 23 ± 4.2 years) from our Assessing Inherent Markers for Metabolic syndrome in the Young (AIMMY) study. Both males and females with the RR vs XX genotype achieved higher mean VO2 peak scores (47.8 ± 1.5 vs 43.2 ±1.8 ml/O2/min, p = 0.002) and exhibited higher resting systolic (115 ± 2 vs 105 ± mmHg, p = 0.027) and diastolic (69 ± 3 vs 59 ± 3 mmHg, p = 0.005) blood pressure suggesting a role for ACTN3 in the maintenance of vascular tone. We subsequently identified the expression of alpha-actinin 3 protein in pulmonary artery smooth muscle, which may explain the genotype-specific differences in cardiovascular adaptation to acute exercise. In addition, we utilized targeted serum metabolomics to distinguish between RR and XX genotypes, suggesting an additional role for the ACTN3 R577X polymorphism in human metabolism. Taken together, these results identify significant cardiometabolic effects associated with possessing one or more functional copies of the ACTN3 gene. PMID:26107372

  15. Night eating and obesity in the EP3R-deficient mouse

    PubMed Central

    Sanchez-Alavez, Manuel; Klein, Izabella; Brownell, Sara E.; Tabarean, Iustin V.; Davis, Christopher N.; Conti, Bruno; Bartfai, Tamas

    2007-01-01

    Adult mice carrying a null mutation of the prostanoid receptor EP3R (EP3R−/− mice) exhibit increased frequency of feeding during the light cycle of the day and develop an obese phenotype under a normal fat diet fed ad libitum. EP3R−/− mice show increased motor activity, which is not sufficient to offset the increased feeding leading to increased body weight. Altered “nocturnal” activity and feeding behavior is present from a very early age and does not seem to require age-dependent factors for the development of obesity. Obesity in EP3R−/− mice is characterized by elevated leptin and insulin levels and >20% higher body weight compared with WT littermates. Abdominal and subcutaneous fat and increased liver weight account for the weight increase in EP3R−/− mice. These observations expand the roles of prostaglandin E2 signaling in metabolic regulation beyond the reported stimulation of leptin release from adipose tissue to involve actions mediated by EP3R in the regulation of sleep architecture and feeding behavior. The findings add to the growing literature on links between inflammatory signaling and obesity. PMID:17307874

  16. Determination of the pozzolanic activity of fluid catalytic cracking residue. Thermogravimetric analysis studies on FC3R-lime pastes

    SciTech Connect

    Paya, J.; Monzo, J.; Borrachero, M.V.; Velazquez, S.; Bonilla, M

    2003-07-01

    Spent fluid catalytic cracking catalyst (FC3R) from a petrol refinery played a pozzolanic role in portland cement system as revealed by previous experimental data. In the present study, the pozzolanic activity of FC3R was investigated by means thermogravimetry (TG) of cured lime-FC3R pastes. The influence of pozzolan/lime ratio on the pozzolanic activity was investigated. Due to the chemical composition of FC3R is similar to metakaolin (MK), and knowing that MK has a high pozzolanic activity, the latter was used as a material of comparison in this study. The scope of the study is the determination of the pozzolanic activity of FC3R and the evaluation of amount and nature of pozzolanic products. The products obtained from the reaction between FC3R components (SiO{sub 2}/Al{sub 2}O{sub 3}) and calcium hydroxide (CH) have been characterized, finding that the main pozzolanic reaction product was similar to hydrated gehlenite (calcium aluminosilicate hydrate) CSH and CAH were also formed in the reaction. FC3R showed higher pozzolanic reactivity than metakaolin, for low-lime content pastes and early curing age. Thermogravimetry, Fourier transform infrared (FTIR) spectroscopy and scanning electron microscopy (SEM) became very useful techniques for evaluation of reactivity.

  17. Effect of IP3R3 and NPY on age-related declines in olfactory stem cell proliferation

    PubMed Central

    Jia, Cuihong; Hegg, Colleen C.

    2014-01-01

    Losing the sense of smell due to aging compromises health and quality of life. In the mouse olfactory epithelium (OE) aging reduces the capacity for tissue homeostasis and regeneration. The microvillous cell subtype that expresses both inositol trisphosphate receptor type 3 (IP3R3) and the neuroproliferative factor neuropeptide Y (NPY) is critical for regulation of homeostasis, yet its role in aging is undefined. We hypothesized that an age-related decline in IP3R3 expression and NPY signaling underlie age-related homeostatic changes and olfactory dysfunction. We found a decrease in IP3R3+ and NPY+ microvillous cell numbers and NPY protein, and a reduced sensitivity to NPY-mediated proliferation over 24 months. However, in IP3R3-deficient mice, there was no further age-related reduction in cell numbers, proliferation, or olfactory function compared to wild-type. The proliferative response was impaired in aged IP3R3-deficient mice when injury was caused by satratoxin-G, which induces IP3R3-mediated NPY release, but not by bulbectomy, which does not evoke NPY release. These data identify IP3R3 and NPY signaling as targets for improving recovery following olfactotoxicant exposure. PMID:25482245

  18. Effect of IP3R3 and NPY on age-related declines in olfactory stem cell proliferation.

    PubMed

    Jia, Cuihong; Hegg, Colleen C

    2015-02-01

    Losing the sense of smell because of aging compromises health and quality of life. In the mouse olfactory epithelium, aging reduces the capacity for tissue homeostasis and regeneration. The microvillous cell subtype that expresses both inositol trisphosphate receptor type 3 (IP3R3) and the neuroproliferative factor neuropeptide Y (NPY) is critical for regulation of homeostasis, yet its role in aging is undefined. We hypothesized that an age-related decline in IP3R3 expression and NPY signaling underlie age-related homeostatic changes and olfactory dysfunction. We found a decrease in IP3R3(+) and NPY(+) microvillous cell numbers and NPY protein and a reduced sensitivity to NPY-mediated proliferation over 24 months. However, in IP3R3-deficient mice, there was no further age-related reduction in cell numbers, proliferation, or olfactory function compared with wild type. The proliferative response was impaired in aged IP3R3-deficient mice when injury was caused by satratoxin G, which induces IP3R3-mediated NPY release, but not by bulbectomy, which does not evoke NPY release. These data identify IP3R3 and NPY signaling as targets for improving recovery following olfactotoxicant exposure. PMID:25482245

  19. Maintenance of normal blood pressure is dependent on IP3R1-mediated regulation of eNOS.

    PubMed

    Yuan, Qi; Yang, Jingyi; Santulli, Gaetano; Reiken, Steven R; Wronska, Anetta; Kim, Mindy M; Osborne, Brent W; Lacampagne, Alain; Yin, Yuxin; Marks, Andrew R

    2016-07-26

    Endothelial cells (ECs) are critical mediators of blood pressure (BP) regulation, primarily via the generation and release of vasorelaxants, including nitric oxide (NO). NO is produced in ECs by endothelial NO synthase (eNOS), which is activated by both calcium (Ca(2+))-dependent and independent pathways. Here, we report that intracellular Ca(2+) release from the endoplasmic reticulum (ER) via inositol 1,4,5-trisphosphate receptor (IP3R) is required for Ca(2+)-dependent eNOS activation. EC-specific type 1 1,4,5-trisphosphate receptor knockout (IP3R1(-/-)) mice are hypertensive and display blunted vasodilation in response to acetylcholine (ACh). Moreover, eNOS activity is reduced in both isolated IP3R1-deficient murine ECs and human ECs following IP3R1 knockdown. IP3R1 is upstream of calcineurin, a Ca(2+)/calmodulin-activated serine/threonine protein phosphatase. We show here that the calcineurin/nuclear factor of activated T cells (NFAT) pathway is less active and eNOS levels are decreased in IP3R1-deficient ECs. Furthermore, the calcineurin inhibitor cyclosporin A, whose use has been associated with the development of hypertension, reduces eNOS activity and vasodilation following ACh stimulation. Our results demonstrate that IP3R1 plays a crucial role in the EC-mediated vasorelaxation and the maintenance of normal BP. PMID:27402766

  20. The inositol 1,4,5-trisphosphate receptor (IP3R) and its regulators: sometimes good and sometimes bad teamwork.

    PubMed

    Choe, Chi-Un; Ehrlich, Barbara E

    2006-11-28

    In both nonexcitable and excitable cells, the inositol 1,4,5-trisphosphate receptor (IP(3)R) is the primary cytosolic target responsible for the initiation of intracellular calcium (Ca(2+)) signaling. To fulfill this function, the IP(3)R depends on interaction with accessory subunits and regulatory proteins. These include proteins that reside in the lumen of the endoplasmic reticulum (ER), such as chromogranin A and B and ERp44, and cytosolic proteins, such as neuronal Ca(2+) sensor 1, huntingtin, cytochrome c, IP(3)R-binding protein released with inositol 1,4,5-trisphosphate, Homer, and 4.1N. Specific interactions between these modulatory proteins and the IP(3)R have been described, making it clear that the controlled modulation of the IP(3)R by its binding partners is necessary for physiological cell regulation. The functional coupling of these modulators with the IP(3)R can control apoptosis, intracellular pH, the initiation and regulation of neuronal Ca(2+) signaling, exocytosis, and gene expression. The pathophysiological relevance of IP(3)R modulation is apparent when the functional interaction of these proteins is enhanced or abolished by mutation or overexpression. The subsequent deregulation of the IP(3)R leads to pathological changes in Ca(2+) signaling, signal initiation, the amplitude and frequency of Ca(2+) signals, and the duration of the Ca(2+) elevation. Consequences of this deregulation include abnormal growth and apoptosis. Complex regulation of Ca(2+) signaling is required for the cell to live and function, and this difficult task can only be managed when the IP(3)R teams up and acts properly with its numerous binding partners. PMID:17132820

  1. Site-directed Mutagenesis Reveals Regions Implicated in the Stability and Fiber Formation of Human λ3r Light Chains*

    PubMed Central

    Villalba, Miryam I.; Canul-Tec, Juan C.; Luna-Martínez, Oscar D.; Sánchez-Alcalá, Rosalba; Olamendi-Portugal, Timoteo; Rudiño-Piñera, Enrique; Rojas, Sonia; Sánchez-López, Rosana; Fernández-Velasco, Daniel A.; Becerril, Baltazar

    2015-01-01

    Light chain amyloidosis (AL) is a disease that affects vital organs by the fibrillar aggregation of monoclonal light chains. λ3r germ line is significantly implicated in this disease. In this work, we contrasted the thermodynamic stability and aggregation propensity of 3mJL2 (nonamyloidogenic) and 3rJL2 (amyloidogenic) λ3 germ lines. Because of an inherent limitation (extremely low expression), Cys at position 34 of the 3r germ line was replaced by Tyr reaching a good expression yield. A second substitution (W91A) was introduced in 3r to obtain a better template to incorporate additional mutations. Although the single mutant (C34Y) was not fibrillogenic, the second mutation located at CDR3 (W91A) induced fibrillogenesis. We propose, for the first time, that CDR3 (position 91) affects the stability and fiber formation of human λ3r light chains. Using the double mutant (3rJL2/YA) as template, other variants were constructed to evaluate the importance of those substitutions into the stability and aggregation propensity of λ3 light chains. A change in position 7 (P7D) boosted 3rJL2/YA fibrillogenic properties. Modification of position 48 (I48M) partially reverted 3rJL2/YA fibril aggregation. Finally, changes at positions 8 (P8S) or 40 (P40S) completely reverted fibril formation. These results confirm the influential roles of N-terminal region (positions 7 and 8) and the loop 40–60 (positions 40 and 48) on AL. X-ray crystallography revealed that the three-dimensional topology of the single and double λ3r mutants was not significantly altered. This mutagenic approach helped to identify key regions implicated in λ3 AL. PMID:25505244

  2. Synthesis and characterization of zinc and cadmium compounds with arenephosphinothiol ligands. Crystal and molecular structures of [Cd{sub 2}{l{underscore}brace}2-(Ph{sub 2}PO)C{sub 6}H{sub 4}S{r{underscore}brace}{sub 4}], [Zn{l{underscore}brace}2-(Ph{sub 2}P)-6-(Me{sub 3}Si)C{sub 6}H{sub 3}S{r{underscore}brace}{sub 2}], [Cd{l{underscore}brace}2-(Ph{sub 2}PO)-6-(Me{sub 3}Si)C{sub 6}H{sub 3}S{r{underscore}brace}{sub 2}(CH{sub 3}OH)], and [Zn{l{underscore}brace}PhPO(C{sub 6}H{sub 4}S-2){sub 2}{r{underscore}brace}(bipy)

    SciTech Connect

    Perez-Lourido, P.; Romero, J.; Garcia-Vazquez, J.A.; Sousa, A.; Maresca, K.P.; Zubieta, J.

    1999-08-09

    The electrochemical oxidation of a metallic anode (zinc or cadmium) in an acetonitrile solution of a series of arenephosphinothiol ligands, 2-(Ph{sub 2}P)C{sub 6}H{sub 4}SH, 2-(Ph{sub 2}P)-6-(Me{sub 3}Si)C{sub 6}H{sub 3}SH, 2-(Ph{sub 2}PO)-6-(Me{sub 3}Si)C{sub 6}H{sub 3}SH, and PhP-(C{sub 6}H{sub 4}SH-2){sub 2} [abbreviated RP-(SH){sub x}, x = 1 or 2], affords [M(RP-S){sub 2}] and [M(RP-S{sub 2})], M = Zn, Cd. Adducts of several of these compounds with 1,10-phenanthroline and 2,2{prime}-bipyridine have also been obtained by addition of these coligands to the electrolysis phase. The compounds obtained have been characterized by microanalysis, IR, UV-visible, FAB spectrometry and {sup 1}H, {sup 31}P NMR spectroscopic studies. The compounds [Cd{sub 2}{l{underscore}brace}2-(Ph{sub 2}PO)-C{sub 6}H{sub 4}S{r{underscore}brace}{sub 4}]CH{sub 3}CN (1), [Zn{l{underscore}brace}2-(Ph{sub 2}P)-6-(Me{sub 3}Si)C{sub 6}H{sub 3}S{r{underscore}brace}{sub 2}] (2), [Cd{l{underscore}brace}2-(Ph{sub 2}PO)-6-(Me{sub 3}Si)C{sub 6}H{sub 3}S{r{underscore}brace}{sub 2}(CH{sub 3}OH)] (3), and [Zn{l{underscore}brace}PhPO(C{sub 6}H{sub 4}S-2){sub 2}{r{underscore}brace}(bipy)] (4), have been also characterized by single-crystal X-ray diffraction. Compound 1 is binuclear with a {l{underscore}brace}Cd{sub 2}S{sub 2}{r{underscore}brace} core and distorted trigonal bipyramidal {l{underscore}brace}CdO{sub 2}S{sub 3}{r{underscore}brace} geometry about the Cd sites. Compounds 2, 3, and 4 are mononuclear with distorted tetrahedral {l{underscore}brace}ZnP{sub 2}S{sub 2}{r{underscore}brace}, distorted square pyramidal {l{underscore}brace}CdO{sub 3}S{sub 2}{r{underscore}brace}, and distorted trigonal bipyramidal {l{underscore}brace}ZnON{sub 2}S{sub 2}{r{underscore}brace} geometries, respectively.

  3. IP(3)R-mediated Ca(2+) release is modulated by anandamide in isolated cardiac nuclei.

    PubMed

    Currie, Susan; Rainbow, Richard D; Ewart, Marie-Ann; Kitson, Susan; Pliego, Esperanza Herradon; Kane, Kathleen A; McCarron, John G

    2008-12-01

    Cannabinoids (CBs) are known to alter coronary vascular tone and cardiac performance. They also exhibit cardioprotective properties, particularly in their ability to limit the damage produced by ischaemia reperfusion injury. The mechanisms underlying these effects are unknown. Here we investigate the intracellular localisation of CB receptors in the heart and examine whether they may modulate localised nuclear Ca(2+) release. In isolated cardiac nuclear preparations, expression of both the inositol 1,4,5-trisphosphate receptor type 2 (IP(3)R) and CB receptors (CB(1)R and CB(2)R) was demonstrated by immunoblotting. Both receptors localised to the nucleus and purity of the nuclear preparations was confirmed by co-expression of the nuclear marker protein nucleolin but absence of cytoplasmic actin. To measure effects of IP(3)R and CBR agonists on nuclear Ca(2+) release, isolated nuclei were loaded with Fluo5N-AM. This dye accumulates in the nuclear envelope. Isolated nuclei responded to IP(3) with rapid and transient Ca(2+) release from the nuclear envelope. Anandamide inhibited this IP(3)-mediated release. Preincubation of nuclear preparations with either the CB(1)R antagonist (AM251) or the CB(2)R antagonist (AM630) reversed anandamide-mediated inhibition to 80% and 60% of control values respectively. When nuclei were pre-treated with both CBR antagonists, anandamide-mediated inhibition of IP(3)-induced Ca(2+) release was completely reversed. These results are the first to demonstrate the existence of cardiac nuclear CB receptors. They are also the first to show that anandamide can negatively modulate IP(3)-mediated nuclear Ca(2+) release. As such, this provides evidence for a novel key mechanism underlying the action of CBs and CBRs in the heart. PMID:18692061

  4. The ACTN3 R577X Polymorphism Is Associated with Cardiometabolic Fitness in Healthy Young Adults

    PubMed Central

    Deschamps, Chelsea L.; Connors, Kimberly E.; Klein, Matthias S.; Johnsen, Virginia L.; Shearer, Jane; Vogel, Hans J.; Devaney, Joseph M.; Gordish-Dressman, Heather; Many, Gina M.; Barfield, Whitney; Hoffman, Eric P.; Kraus, William E.; Hittel, Dustin S.

    2015-01-01

    Homozygosity for a premature stop codon (X) in the ACTN3 “sprinter” gene is common in humans despite the fact that it reduces muscle size, strength and power. Because of the close relationship between skeletal muscle function and cardiometabolic health we examined the influence of ACTN3 R577X polymorphism over cardiovascular and metabolic characteristics of young adults (n = 98 males, n = 102 females; 23 ± 4.2 years) from our Assessing Inherent Markers for Metabolic syndrome in the Young (AIMMY) study. Both males and females with the RR vs XX genotype achieved higher mean VO2 peak scores (47.8 ± 1.5 vs 43.2 ±1.8 ml/O2/min, p = 0.002) and exhibited higher resting systolic (115 ± 2 vs 105 ± mmHg, p = 0.027) and diastolic (69 ± 3 vs 59 ± 3 mmHg, p = 0.005) blood pressure suggesting a role for ACTN3 in the maintenance of vascular tone. We subsequently identified the expression of alpha-actinin 3 protein in pulmonary artery smooth muscle, which may explain the genotype-specific differences in cardiovascular adaptation to acute exercise. In addition, we utilized targeted serum metabolomics to distinguish between RR and XX genotypes, suggesting an additional role for the ACTN3 R577X polymorphism in human metabolism. Taken together, these results identify significant cardiometabolic effects associated with possessing one or more functional copies of the ACTN3 gene. PMID:26107372

  5. H2S regulation of nitric oxide metabolism

    PubMed Central

    Kolluru, Gopi K.; Yuan, Shuai; Shen, Xinggui; Kevil, Christopher G.

    2015-01-01

    Nitric oxide (NO) and hydrogen sulfide (H2S) are two major gaseous signaling molecules that regulate diverse physiological functions. Recent publications indicate the regulatory role of H2S on NO metabolism. In this chapter, we discuss the latest findings on H2S-NO interactions through formation of novel chemical derivatives, and experimental approaches to study these adducts. This chapter also addresses potential H2S interference on various NO detection techniques, along with precautions for analyzing biological samples from various sources. This information will facilitate critical evaluation and clearer insight into H2S regulation of NO signaling and its influence on various physiological functions. PMID:25725527

  6. Design of a 10**36 CM-2 S-1 Super-B Factory

    SciTech Connect

    Biagini, M.E.; Boni, R.; Boscolo, M.; Demma, T.; Drago, A.; Guiducci, S.; Raimondi, P.; Tomassini, S.; Zobov, M.; Bertsche, Kirk J.; Novokhatski, A.; Seeman, J.; Sullivan, M.; Wienands, U.; Wittmer, W.; Bettoni, S.; Paoloni, E.; Marchiori, G.; Bogomyagkov, A.; Koop, I.; Levichev, E.; /Novosibirsk, IYF

    2011-10-24

    Parameters have been studied for a high luminosity e{sup +}e{sup -} collider operating at the Upsilon 4S that would deliver a luminosity of 1 to 4 x 10{sup 36}/cm{sup 2}/s. This collider, called a Super-B Factory, would use a combination of linear collider and storage ring techniques. In this scheme an electron beam and a positron beam are stored in low-emittance damping rings similar to those designed for a Linear Collider (LC) or the next generation light source. A LC style interaction region is included in the ring to produce sub-millimeter vertical beta functions at the collision point. A large crossing angle (+/- 24 mrad) is used at the collision point to allow beam separation. A crab-waist scheme is used to reduce the hourglass effect and restore peak luminosity. Beam currents of 1.8 A at 4 x 7 GeV in 1251 bunches can produce a luminosity of 10{sup 36}/cm{sup 2}/s with upgrade possibilities. Such a collider would produce an integrated luminosity of about 10,000 fb{sup -1} (10 ab{sup -1}) in a running year (10{sup 7} sec) at the {gamma}(4S) resonance. Further possibilities include having longitudinally polarized e- at the IR and operating at the J/Psi and Psi beam energies.

  7. Apoptosis induced clustering of IP(3)R1 in nuclei of non-differentiated PC12 cells.

    PubMed

    Ondrias, Karol; Lencesova, Lubomira; Sirova, Marta; Labudova, Martina; Pastorekova, Silvia; Kopacek, Juraj; Krizanova, Olga

    2011-12-01

    Inositol 1,4,5-trisphosphate (IP(3)) receptors are emerging as key sites for regulation by pro- and anti-apoptotic factors. Induction of apoptosis for 3 h increased mRNA and protein levels of type 1 IP(3) receptors in non-differentiated (ND), but not in differentiated (D) PC12 cells. Inhibitors of the IP(3) R's calcium release-2-aminoethoxydiphenyl borate (2-APB) and xestospongin-completely prevented Bax and caspase-3 mRNA increase after treatment with the apoptosis inducer set (AIK), and this reinforces the importance of IP(3) R1 in the apoptosis of ND PC12 cells. Apoptosis induction not only increases the IP(3) R1 protein, but it also causes formation of IP(3) R1 clusters in the nucleus which most likely result from fusion of the nucleoplasmic reticulum and/or IP(3) R1 translocation to the nucleus. This is quite similar to the observations noted after overexpression of IP(3) R1 in PC12 cells. The amount of IP(3) induced calcium release was higher in control than in AIK-treated cells. From our results we propose that after the apoptosis induction the amount of intranuclear calcium decreased dramatically due to the increase of calcium permeability of the nuclear calcium store vesicles. Therefore, increase of the calcium permeability may result from IP(3) receptors translocation to nuclei that can boost the calcium transport through IP(3) receptors. PMID:21302308

  8. Chemiluminescent Detection of Enzymatically Produced H2S

    PubMed Central

    Bailey, T. Spencer; Pluth, Michael D.

    2015-01-01

    Hydrogen sulfide (H2S) has emerged as an important biological signaling molecule. To better understand the multifaceted biological roles of H2S, the development of selective and sensitive biocompatible assays for H2S is becoming increasingly important. Motivated by these challenges, our laboratory is developing new methods to further detect and monitor biological H2S. Here, we describe in detail our recent advances in the development and the use of chemiluminescence-based H2S sensors to assist other investigators with use of these chemical tools. We highlight the use of these tools use by displaying their selectivity and high sensitivity toward H2S and provide examples of assays we have developed to detect enzymatically produced H2S. PMID:25725517

  9. Crystallographic analysis of the intact metal centres [3Fe-4S](1+/0) and [4Fe-4S](2+/1+) in a Zn(2+) -containing ferredoxin.

    PubMed

    Frazão, Carlos; Aragão, David; Coelho, Ricardo; Leal, Sónia S; Gomes, Cláudio M; Teixeira, Miguel; Carrondo, Maria Arménia

    2008-03-01

    Detailed structural models of di-cluster seven-iron ferredoxins constitute a valuable resource for folding and stability studies relating the metal cofactors' role in protein stability. The here reported, hemihedric twinned crystal structure at 2.0 A resolution from Acidianus ambivalens ferredoxin, shows an integral 103 residues, physiologically relevant native form composed by a N-terminal extension comprising a His/Asp Zn(2+) site and the ferredoxin (betaalphabeta)(2) core, which harbours intact clusters I and II, a [3Fe-4S](1+/0) and a [4Fe-4S](2+/1+) centres. This is in contrast with the previously available ferredoxin structure from Sulfolofus tokodai, which was obtained from an artificial oxidative conversion with two [3Fe-4S](1+/0) centres and poor definition around cluster II. PMID:18258200

  10. Identification of H2S3 and H2S produced by 3-mercaptopyruvate sulfurtransferase in the brain

    PubMed Central

    Kimura, Yuka; Toyofuku, Yukiko; Koike, Shin; Shibuya, Norihiro; Nagahara, Noriyuki; Lefer, David; Ogasawara, Yuki; Kimura, Hideo

    2015-01-01

    Hydrogen polysulfides (H2Sn) have a higher number of sulfane sulfur atoms than hydrogen sulfide (H2S), which has various physiological roles. We recently found H2Sn in the brain. H2Sn induced some responses previously attributed to H2S but with much greater potency than H2S. However, the number of sulfur atoms in H2Sn and its producing enzyme were unknown. Here, we detected H2S3 and H2S, which were produced from 3-mercaptopyruvate (3 MP) by 3-mercaptopyruvate sulfurtransferase (3MST), in the brain. High performance liquid chromatography with fluorescence detection (LC-FL) and tandem mass spectrometry (LC-MS/MS) analyses showed that H2S3 and H2S were produced from 3 MP in the brain cells of wild-type mice but not 3MST knockout (3MST-KO) mice. Purified recombinant 3MST and lysates of COS cells expressing 3MST produced H2S3 from 3 MP, while those expressing defective 3MST mutants did not. H2S3 was localized in the cytosol of cells. H2S3 was also produced from H2S by 3MST and rhodanese. H2S2 was identified as a minor H2Sn, and 3 MP did not affect the H2S5 level. The present study provides new insights into the physiology of H2S3 and H2S, as well as novel therapeutic targets for diseases in which these molecules are involved. PMID:26437775

  11. Crystallographic analysis of the structure of livingstonite HgSb{sub 4}S{sub 8} from refined data

    SciTech Connect

    Borisov, S. V. Pervukhina, N. V.; Magarill, S. A.; Kuratieva, N. V.; Vasil'ev, V. I.

    2010-03-15

    An X-ray diffraction study of mineral livingstonite (HgSb{sub 4}S{sub 8}) from Khaydarkan (Kyrgyzstan) has been performed on a Bruker Nonius X8Apex diffractometer with a 4K CCD detector (R = 0.031). The unit-cell parameters were found to be a = 30.1543(10) A, b = 3.9953(2) A, c = 21.4262(13) A, {beta} = 104.265(1){sup o}, V = 2501.7(2) A{sup 3}, Z = 8, d{sub calcd} = 5.013 g/cm{sup 3}, and sp. gr. A2/a. It was confirmed that livingstonite belongs to rod-layers structures. In one type of layer, two double Sb{sub 2}S{sub 4} chains are bound by disulfide groups [S{sub 2}]{sup 2-} (S-S 2.078(2) A); in the other type, these chains are bound via Hg{sup 2+} cations. A crystallographic analysis confirmed the existence of independent pseudotranslational ordering in the cation and anion matrices, which is characteristic of the lozenge-like structures of sulfides and sulfosalts.

  12. Working with "H2S": facts and apparent artifacts.

    PubMed

    Wedmann, Rudolf; Bertlein, Sarah; Macinkovic, Igor; Böltz, Sebastian; Miljkovic, Jan Lj; Muñoz, Luis E; Herrmann, Martin; Filipovic, Milos R

    2014-09-15

    Hydrogen sulfide (H2S) is an important signaling molecule with physiological endpoints similar to those of nitric oxide (NO). Growing interest in its physiological roles and pharmacological potential has led to large sets of contradictory data. The principle cause of these discrepancies can be the common neglect of some of the basic H2S chemistry. This study investigates how the experimental outcome when working with H2S depends on its source and dose and the methodology employed. We show that commercially available NaHS should be avoided and that traces of metal ions should be removed because these can reduce intramolecular disulfides and change protein structure. Furthermore, high H2S concentrations may lead to a complete inhibition of cell respiration, mitochondrial membrane potential depolarization and superoxide generation, which should be considered when discussing the biological effects observed upon treatment with high concentrations of H2S. In addition, we provide chemical evidence that H2S can directly react with superoxide. H2S is also capable of reducing cytochrome c(3+) with the concomitant formation of superoxide. H2S does not directly react with nitrite but with NO electrodes that detect H2S. In addition, H2S interferes with the Griess reaction and should therefore be removed from the solution by Cd(2+) or Zn(2+) precipitation prior to nitrite quantification. 2-Phenyl-4,4,5,5-tetramethylimidazoline-1-oxyl 3-oxide (PTIO) is reduced by H2S, and its use should be avoided in combination with H2S. All these constraints must be taken into account when working with H2S to ensure valid data. PMID:24932545

  13. Modeling of H2S migration through landfill cover materials.

    PubMed

    Xu, Qiyong; Powell, Jon; Jain, Pradeep; Townsend, Timothy

    2014-01-15

    The emission of H2S from landfills in the United States is an emergent problem because measured concentrations within the waste mass and in ambient air have been observed at potentially unsafe levels for on-site workers and at levels that can cause a nuisance and potentially deleterious health impacts to surrounding communities. Though recent research has provided data on H2S concentrations that may be observed at landfills, facility operators and landfill engineers have limited predictive tools to anticipate and plan for potentially harmful H2S emissions. A one-dimensional gas migration model was developed to assist engineers and practitioners better evaluate and predict potential emission levels of H2S based on four factors: concentration of H2S below the landfill surface (C0), advection velocity (v), H2S effective diffusion coefficient (D), and H2S adsorption coefficient of landfill cover soil (μ). Model simulations indicated that H2S migration into the atmosphere can be mitigated by reducing H2S diffusion and advection or using alternative cover soils with a high H2S adsorption coefficient. Laboratory column experiments were conducted to investigate the effects of the four parameters on H2S migration in cover soils and to calculate the adsorption coefficient of different cover materials. The model was validated by comparing results with laboratory column experiments. Based on the results, the laboratory column provides an effective way to estimate the H2S adsorption coefficient, which can then be incorporated into the developed model to predict the depth of cover soil required to reduce emitted H2S concentrations below a desired level. PMID:24316799

  14. A PAS domain with an oxygen labile [4Fe-4S](2+) cluster in the oxygen sensor kinase NreB of Staphylococcus carnosus.

    PubMed

    Müllner, Martin; Hammel, Oliver; Mienert, Bernd; Schlag, Steffen; Bill, Eckhard; Unden, Gottfried

    2008-12-30

    The cytoplasmic histidine sensor kinase NreB of Staphylococcus carnosus responds to O(2) and controls together with the response regulator NreC the expression of genes of nitrate/nitrite respiration. nreBC homologous genes were found in Staphylococcus strains and Bacillus clausii, and a modified form was found in some Lactobacillus strains. NreB contains a sensory domain with similarity to heme B binding PAS domains. Anaerobically prepared NreB of S. carnosus exhibited a (diamagnetic) [4Fe-4S](2+) cluster when assessed by Mossbauer spectroscopy. Upon reaction with air, the cluster was degraded with a half-life of approximately 2.5 min. No significant amounts of Mossbauer or EPR detectable intermediates were found during the decay, but magnetic Mossbauer spectra revealed formation of diamagnetic [2Fe-2S](2+) clusters. After extended exposure to air, NreB was devoid of a FeS cluster. Photoreduction with deazaflavin produced small amounts of [4Fe-4S](+), which were degraded subsequently. The magnetically perturbed Mossbauer spectrum of the [4Fe-4S](2+) cluster corroborated the S = 0 spin state and revealed uniform electric field gradient tensors of the iron sites, suggesting full delocalization of the valence electrons and binding of each of the Fe ions by four S ligands, including the ligand to the protein. Mutation of each of the four Cys residues inactivated NreB function in vivo in accordance with their role as ligands. [4Fe-4S](2+) cluster-containing NreB had high kinase activity. Exposure to air decreased the kinase activity and content of the [4Fe-4S](2+) cluster with similar half-lives. We conclude that the sensory domain of NreB represents a new type of PAS domain containing a [4Fe-4S](2+) cluster for sensing and function. PMID:19102705

  15. A Redox Active [2Fe-2S] Cluster on the Hydrogenase Maturase HydF.

    PubMed

    Shepard, Eric M; Byer, Amanda S; Betz, Jeremiah N; Peters, John W; Broderick, Joan B

    2016-06-28

    [FeFe]-hydrogenases are nature's most prolific hydrogen catalysts, excelling at facilely interconverting H2 and protons. The catalytic core common to all [FeFe]-hydrogenases is a complex metallocofactor, referred to as the H-cluster, which is composed of a standard [4Fe-4S] cluster linked through a bridging thiolate to a 2Fe subcluster harboring dithiomethylamine, carbon monoxide, and cyanide ligands. This 2Fe subcluster is synthesized and inserted into [FeFe]-hydrogenase by three maturase enzymes denoted HydE, HydF, and HydG. HydE and HydG are radical S-adenosylmethionine enzymes and synthesize the nonprotein ligands of the H-cluster. HydF is a GTPase that functions as a scaffold or carrier for 2Fe subcluster production. Herein, we utilize UV-visible, circular dichroism, and electron paramagnetic resonance spectroscopic studies to establish the existence of redox active [4Fe-4S] and [2Fe-2S] clusters bound to HydF. We have used spectroelectrochemical titrations to assign iron-sulfur cluster midpoint potentials, have shown that HydF purifies with a reduced [2Fe-2S] cluster in the absence of exogenous reducing agents, and have tracked iron-sulfur cluster spectroscopic changes with quaternary structural perturbations. Our results provide an important foundation for understanding the maturation process by defining the iron-sulfur cluster content of HydF prior to its interaction with HydE and HydG. We speculate that the [2Fe-2S] cluster of HydF either acts as a placeholder for HydG-derived Fe(CO)2CN species or serves as a scaffold for 2Fe subcluster assembly. PMID:27232385

  16. Relationship Between ACTN3 R577X Polymorphism and Physical Abilities in Polish Athletes.

    PubMed

    Orysiak, Joanna; Busko, Krzysztof; Mazur-RóŻycka, Joanna; Michalski, Radoslaw; Gajewski, Jan; Malczewska-Lenczowska, Jadwiga; Sitkowski, Dariusz

    2015-08-01

    The purpose of this study was to examine the association between α-actinin 3 (ACTN3) R577X polymorphism and physical abilities of male athletes performing various sports (volleyball, ice hockey, canoeing, swimming). One hundred eighty-five subjects were recruited for the study. The following measurements were taken: height of jump and power output in countermovement jump and spike jump (SPJ) and muscle strength of 10 muscle groups. The R577X polymorphism of ACTN3 was typed using polymerase chain reaction restriction fragment length polymorphism. The results showed that RR genotype carriers develop greater power output in SPJ than RX and XX individuals (44.6 ± 11.1, 42.6 ± 11.0, and 38.4 ± 7.9 W·kg(-1) for RR, RX, and XX genotypes, respectively) and height of jump in SPJ (0.537 ± 0.075, 0.523 ± 0.072, and 0.498 ± 0.053 m for RR, RX, and XX genotypes, respectively). Muscle strength did not differ between genotype groups. This suggests that the ACTN3 gene has a greater impact on determining dynamic movements than influencing static muscle strength. PMID:25734782

  17. The association between the ACTN3 R577X polymorphism and noncontact acute ankle sprains.

    PubMed

    Shang, Xuya; Li, Zongyu; Cao, Xuecheng; Xie, Chen; Gu, Mingyong; Chen, Pei; Yang, Xiaoqing; Cai, Jinfang

    2015-01-01

    Ankle sprains are one of the most severe musculoskeletal soft tissue injuries during physical activity. Although many risk factors have been offered, it is unclear why some individuals develop noncontact ankle sprains when participating in comparable levels of physical exertion under identical environmental conditions and others do not. The ACTN3 gene that encodes the α-actinin-3 protein, which is, only expressed in the Z line of fast glycolytic muscle fibres was found to associate with power/strength performance. The aim of this study was therefore to investigate whether the ACTN3 gene polymorphism is associated with noncontact acute ankle sprains. One hundred and forty-two participants with clinically diagnosed noncontact acute ankle sprains as well as 280 physically active controls participants without any history of ankle sprains were included in this case-control genetic association study. The RR genotype (odds ratio (OR) = 0.56; 95% confidence interval (CI), 0.32-0.65, P = 0.011) and R allele (OR = 0.64; 95% CI, 0.37-0.68, P = 0.002) of the ACTN3 were significantly low-represented in the acute ankle sprains group compared with the control group. The ACTN3 R577X is associated with acute ankle sprains in Chinese participants in this study. This is the first study to suggest that an individual with a RR genotype is at a decreased risk of acute ankle sprains. PMID:25687200

  18. Gating machinery of InsP3R channels revealed by electron cryomicroscopy

    PubMed Central

    Fan, Guizhen; Baker, Matthew L.; Wang, Zhao; Baker, Mariah R.; Sinyagovskiy, Pavel A.; Chiu, Wah; Ludtke, Steven J.; Serysheva, Irina I.

    2016-01-01

    Inositol-1,4,5-trisphosphate receptors (InsP3Rs) are ubiquitous ion channels responsible for cytosolic Ca2+ signalling and essential for a broad array of cellular processes ranging from contraction to secretion, and from proliferation to cell death. Despite decades of research on InsP3Rs, a mechanistic understanding of their structure–function relationship is lacking. Here we present the first, to our knowledge, near-atomic (4.7 Å) resolution electron cryomicroscopy structure of the tetrameric mammalian type 1 InsP3R channel in its apo-state. At this resolution, we are able to trace unambiguously ~85% of the protein backbone, allowing us to identify the structural elements involved in gating and modulation of this 1.3-megadalton channel. Although the central Ca2+-conduction pathway is similar to other ion channels, including the closely related ryanodine receptor, the cytosolic carboxy termini are uniquely arranged in a left-handed α-helical bundle, directly interacting with the amino-terminal domains of adjacent subunits. This configuration suggests a molecular mechanism for allosteric regulation of channel gating by intracellular signals. PMID:26458101

  19. Characterization of chitosan/montmorillonite membranes as adsorbents for Bezactiv Orange V-3R dye.

    PubMed

    Nesic, Aleksandra R; Velickovic, Sava J; Antonovic, Dusan G

    2012-03-30

    The synthesis, characterization and environmental application of chitosan/montmorillonite membrane for adsorption Bezactiv Orange V-3R were investigated. Chitosan/montmorillonite membranes were synthesized in different ratios, containing 10-50% of montmorillonite (MMT) in membrane. These membranes were characterized by using Fourier transform infrared spectroscopy (FTIR), thermogravimetry (TG) and scanning electron microscopy (SEM). The adsorption kinetics were investigated using three different concentrations of Bezactiv Orange dye (30, 50 and 80 mg/L). The adsorption capacity increases with increasing amount of MMT in membranes. These membranes show the highest adsorption capacity when the initial dye concentration was 80 mg/L. The results show that the optimum condition for adsorption of Bezactiv Orange is pH 6. A comparison of kinetic models was evaluated for the pseudo-first and pseudo-second order and intra-particle diffusion. The experimental data were fitted to the pseudo-second order kinetic model, and also followed by intra-particle diffusion. Intra-particle diffusion is not the only rate-controlling step. The Langmuir and Freundlich adsorption isotherms were applied to experimental equilibrium data at different concentration of dye solution. The results indicated the competency of chitosan/MMT membranes adsorbent for Bezactiv Orange adsorption. PMID:22305598

  20. UTILITY ADVANCED TURBINE SYSTEMS (ATS) TECHNOLOGY READINESS TESTING: PHASE 3R

    SciTech Connect

    1999-09-01

    The overall objective of the Advanced Turbine System (ATS) Phase 3 Cooperative Agreement between GE and the US Department of Energy (DOE) is the development of the GE 7H and 9H combined cycle power systems. The major effort will be expended on detail design. Validation of critical components and technologies will be performed, including: hot gas path component testing, sub-scale compressor testing, steam purity test trials, and rotational heat transfer confirmation testing. Processes will be developed to support the manufacture of the first system, which was to have been sited and operated in Phase 4 but will now be sited and operated commercially by GE. This change has resulted from DOE's request to GE for deletion of Phase 4 in favor of a restructured Phase 3 (as Phase 3R) to include full speed, no load (FSNL) testing of the 7H gas turbine. Technology enhancements that are not required for the first machine design but will be critical for future ATS advances in performance, reliability, and costs will be initiated. Long-term tests of materials to confirm design life predictions will continue. A schematic of the GE H machine is shown. This report summarizes work accomplished in 2Q99.

  1. (2R,3R)-3-O-Benzoyl-N-benzyl­tartramide1

    PubMed Central

    Madura, Izabela D.; Zachara, Janusz; Bernaś, Urszula; Hajmowicz, Halina; Synoradzki, Ludwik

    2012-01-01

    The title compound, C18H17NO6 [systematic name: (2R,3R)-4-benzyl­amino-2-benzo­yloxy-3-hy­droxy-4-oxobutanoic acid], is the first structurally characterized unsymmetrical monoamide–monoacyl tartaric acid derivative. The mol­ecule shows a staggered conformation around the tartramide Csp3—Csp3 bond with trans-oriented carboxyl and amide groups. The mol­ecular conformation is stabilized by an intra­molecular N—H⋯O hydrogen bond. In the crystal, mol­ecules are linked by O—H⋯O hydrogen bonds between the carboxyl and amide carbonyl groups, forming translational chains along [001]. Further O—H⋯O and N—H⋯O hydrogen bonds as well as weaker C—H⋯O and C—H⋯π inter­molecular inter­actions extend the supra­molecular assembly into a double-layer structure parallel to (100). There are no directional inter­actions between the double layers. PMID:22719648

  2. Gating machinery of InsP3R channels revealed by electron cryomicroscopy.

    PubMed

    Fan, Guizhen; Baker, Matthew L; Wang, Zhao; Baker, Mariah R; Sinyagovskiy, Pavel A; Chiu, Wah; Ludtke, Steven J; Serysheva, Irina I

    2015-11-19

    Inositol-1,4,5-trisphosphate receptors (InsP3Rs) are ubiquitous ion channels responsible for cytosolic Ca(2+) signalling and essential for a broad array of cellular processes ranging from contraction to secretion, and from proliferation to cell death. Despite decades of research on InsP3Rs, a mechanistic understanding of their structure-function relationship is lacking. Here we present the first, to our knowledge, near-atomic (4.7 Å) resolution electron cryomicroscopy structure of the tetrameric mammalian type 1 InsP3R channel in its apo-state. At this resolution, we are able to trace unambiguously ∼85% of the protein backbone, allowing us to identify the structural elements involved in gating and modulation of this 1.3-megadalton channel. Although the central Ca(2+)-conduction pathway is similar to other ion channels, including the closely related ryanodine receptor, the cytosolic carboxy termini are uniquely arranged in a left-handed α-helical bundle, directly interacting with the amino-terminal domains of adjacent subunits. This configuration suggests a molecular mechanism for allosteric regulation of channel gating by intracellular signals. PMID:26458101

  3. Synthesis and Functions of Ag2S Nanostructures.

    PubMed

    Cui, Chunyan; Li, Xiaoru; Liu, Jixian; Hou, Yongchao; Zhao, Yuqing; Zhong, Guocheng

    2015-12-01

    The paper presents a review about synthesis and applications of Ag2S nanostructures. As the modern photoelectric and biological materials, Ag2S nanomaterials are potentially useful for both structure and function purposes. Ag2S is a direction narrow band gap semiconductor with special properties. Ag2S nanostructures have been widely researched in chemistry and biochemistry fields because of their unusual optical, electrical, and mechanical properties. It can also be used in many fields, such as photovoltaic cells and infrared detector. In the past few years, Ag2S nanostructures have been synthesized by various methods. The article mainly discusses the four types of preparation methods. Moreover, this article shows a detailed review on the new properties, fabrication, and applications of Ag2S nanocrystals. PMID:26525702

  4. Synthesis and Functions of Ag2S Nanostructures

    NASA Astrophysics Data System (ADS)

    Cui, Chunyan; Li, Xiaoru; Liu, Jixian; Hou, Yongchao; Zhao, Yuqing; Zhong, Guocheng

    2015-11-01

    The paper presents a review about synthesis and applications of Ag2S nanostructures. As the modern photoelectric and biological materials, Ag2S nanomaterials are potentially useful for both structure and function purposes. Ag2S is a direction narrow band gap semiconductor with special properties. Ag2S nanostructures have been widely researched in chemistry and biochemistry fields because of their unusual optical, electrical, and mechanical properties. It can also be used in many fields, such as photovoltaic cells and infrared detector. In the past few years, Ag2S nanostructures have been synthesized by various methods. The article mainly discusses the four types of preparation methods. Moreover, this article shows a detailed review on the new properties, fabrication, and applications of Ag2S nanocrystals.

  5. The Human Iron–Sulfur Assembly Complex Catalyzes the Synthesis of [2Fe-2S] Clusters on ISCU2 That Can Be Transferred to Acceptor Molecules

    PubMed Central

    Fox, Nicholas G.; Chakrabarti, Mrinmoy; McCormick, Sean P.; Lindahl, Paul A.; Barondeau, David P.

    2015-01-01

    Iron–sulfur (Fe–S) clusters are essential protein cofactors for most life forms. In human mitochondria, the core Fe–S biosynthetic enzymatic complex (called SDUF) consists of NFS1, ISD11, ISCU2, and frataxin (FXN) protein components. Few mechanistic details about how this complex synthesizes Fe–S clusters and how these clusters are delivered to targets are known. Here circular dichroism and Mössbauer spectroscopies were used to reveal details of the Fe–S cluster assembly reaction on the SDUF complex. SDUF reactions generated [2Fe-2S] cluster intermediates that readily converted to stable [2Fe-2S] clusters bound to uncomplexed ISCU2. Similar reactions that included the apo Fe–S acceptor protein human ferredoxin (FDX1) resulted in formation of [2Fe-2S]-ISCU2 rather than [2Fe-2S]-FDX1. Subsequent addition of dithiothreitol (DTT) induced transfer of the cluster from ISCU2 to FDX1, suggesting that [2Fe-2S]-ISCU2 is an intermediate. Reactions that initially included DTT rapidly generated [2Fe-2S]-FDX1 and bypassed formation of [2Fe-2S]-ISCU2. In the absence of apo-FDX1, incubation of [2Fe-2S]-ISCU2 with DTT generated [4Fe-4S]-ISCU2 species. Together, these results conflict with a recent report of stable [4Fe-4S] cluster formation on the SDUF complex. Rather, they support a model in which SDUF builds transient [2Fe-2S] cluster intermediates that generate clusters on sulfur-containing molecules, including uncomplexed ISCU2. Additional small molecule or protein factors are required for the transfer of these clusters to Fe–S acceptor proteins or the synthesis of [4Fe-4S] clusters. PMID:26016389

  6. The reducing component BoxA of benzoyl-coenzyme A epoxidase from Azoarcus evansii is a [4Fe-4S] protein.

    PubMed

    Rather, Liv J; Bill, Eckhard; Ismail, Wael; Fuchs, Georg

    2011-12-01

    BoxA is the reductase component of the benzoyl-coenzyme A (CoA) oxidizing epoxidase enzyme system BoxAB. The enzyme catalyzes the key step of an hitherto unknown aerobic, CoA-dependent pathway of benzoate metabolism, which is the epoxidation of benzoyl-CoA to the non-aromatic 2,3-epoxybenzoyl-CoA. The function of BoxA is the transfer of two electrons from NADPH to the epoxidase component BoxB. We could show recently that BoxB is a diiron enzyme, whereas here we demonstrate that BoxA harbors an FAD and two [4Fe-4S] clusters per protein monomer. The characterization of BoxA was hampered by severe oxygen sensitivity; the cubane [4Fe-4S] clusters degrade already with traces of oxygen. Interestingly, the adventitiously formed [3Fe-4S] centers could be reconstituted in vitro by adding Fe(II) and sulfide to retrieve the native cubane centers. BoxA is the first example of a reductase of this type that has an FAD and two bacterial ferredoxin-type [4Fe-4S] clusters. In other cases within the catalytically versatile family of diiron enzymes, the related reductases have plant-type ferredoxin or Rieske-type [2Fe-2S] centers only. PMID:21672639

  7. (2R,1'S,2'R)- and (2S,1'S,2'R)-3-[2-Mono(di,tri)fluoromethylcyclopropyl]alanines and their incorporation into hormaomycin analogues

    PubMed Central

    Kozhushkov, Sergei I; Yufit, Dmitrii S; Grosse, Christian; Kaiser, Marcel

    2014-01-01

    Summary Efficient and scalable syntheses of enantiomerically pure (2R,1'S,2'R)- and (2S,1'S,2'R)-3-[2-mono(di,tri)fluoromethylcyclopropyl]alanines 9a–c, as well as allo-D-threonine (4) and (2S,3R)-β-methylphenylalanine (3), using the Belokon' approach with (S)- and (R)-2-[(N-benzylprolyl)amino]benzophenone [(S)- and (R)-10] as reusable chiral auxiliaries have been developed. Three new fluoromethyl analogues of the naturally occurring octadepsipeptide hormaomycin (1) with (fluoromethylcyclopropyl)alanine moieties have been synthesized and subjected to preliminary tests of their antibiotic activity. PMID:25550751

  8. H2S and Blood Vessels: An Overview.

    PubMed

    Yang, Guangdong; Wang, Rui

    2015-01-01

    The physiological and biomedical importance of hydrogen sulfide (H2S) has been fully recognized in the cardiovascular system as well as in the rest of the body. In blood vessels, cystathionine γ-lyase (CSE) is a major H2S-producing enzyme expressed in both smooth muscle and endothelium as well as periadventitial adipose tissues. Regulation of H2S production from CSE is controlled by a complex integration of transcriptional, posttranscriptional, and posttranslational mechanisms in blood vessels. In smooth muscle cells, H2S regulates cell apoptosis, phenotypic switch, relaxation and contraction, and calcification. In endothelial cells, H2S controls cell proliferation, cellular senescence, oxidative stress, inflammation, etc. H2S interacts with nitric oxide and acts as an endothelium-derived relaxing factor and an endothelium-derived hyperpolarizing factor. H2S generated from periadventitial adipose tissues acts as an adipocyte-derived relaxing factor and modulates the vascular tone. Extensive evidence has demonstrated the beneficial roles of the CSE/H2S system in various blood vessel diseases, such as hypertension, atherosclerosis, and aortic aneurysm. The important roles signaling in the cardiovascular system merit further intensive and extensive investigation. H2S-releasing agents and CSE activators will find their great applications in the prevention and treatment of blood vessel-related disorders. PMID:26162830

  9. Hydrazine solution processed Sb2S3, Sb2Se3 and Sb2(S1−xSex)3 film: molecular precursor identification, film fabrication and band gap tuning

    PubMed Central

    Yang, Bo; Xue, Ding-Jiang; Leng, Meiying; Zhong, Jie; Wang, Liang; Song, Huaibing; Zhou, Ying; Tang, Jiang

    2015-01-01

    Sb2(S1−xSex)3 (0 ≤ x ≤ 1) compounds have been proposed as promising light-absorbing materials for photovoltaic device applications. However, no systematic study on the synthesis and characterization of polycrystalline Sb2(S1−xSex)3 thin films has been reported. Here, using a hydrazine based solution process, single-phase Sb2(S1−xSex)3 films were successfully obtained. Through Raman spectroscopy, we have investigated the dissolution mechanism of Sb in hydrazine: 1) the reaction between Sb and S/Se yields [Sb4S7]2-/[Sb4Se7]2- ions within their respective solutions; 2) in the Sb-S-Se precursor solutions, Sb, S, and Se were mixed on a molecular level, facilitating the formation of highly uniform polycrystalline Sb2(S1−xSex)3 thin films at a relatively low temperature. UV-vis-NIR transmission spectroscopy revealed that the band gap of Sb2(S1−xSex)3 alloy films had a quadratical relationship with the Se concentration x and it followed the equation , where the bowing parameter was 0.118 eV. Our study provides a valuable guidance for the adjustment and optimization of the band gap in hydrazine solution processed Sb2(S1−xSex)3 alloy films for the future fabrication of improved photovoltaic devices. PMID:26042519

  10. Hydrazine solution processed Sb2S3, Sb2Se3 and Sb2(S1-xSex)3 film: molecular precursor identification, film fabrication and band gap tuning

    NASA Astrophysics Data System (ADS)

    Yang, Bo; Xue, Ding-Jiang; Leng, Meiying; Zhong, Jie; Wang, Liang; Song, Huaibing; Zhou, Ying; Tang, Jiang

    2015-06-01

    Sb2(S1-xSex)3 (0 ≤ x ≤ 1) compounds have been proposed as promising light-absorbing materials for photovoltaic device applications. However, no systematic study on the synthesis and characterization of polycrystalline Sb2(S1-xSex)3 thin films has been reported. Here, using a hydrazine based solution process, single-phase Sb2(S1-xSex)3 films were successfully obtained. Through Raman spectroscopy, we have investigated the dissolution mechanism of Sb in hydrazine: 1) the reaction between Sb and S/Se yields [Sb4S7]2-/[Sb4Se7]2- ions within their respective solutions; 2) in the Sb-S-Se precursor solutions, Sb, S, and Se were mixed on a molecular level, facilitating the formation of highly uniform polycrystalline Sb2(S1-xSex)3 thin films at a relatively low temperature. UV-vis-NIR transmission spectroscopy revealed that the band gap of Sb2(S1-xSex)3 alloy films had a quadratical relationship with the Se concentration x and it followed the equation , where the bowing parameter was 0.118 eV. Our study provides a valuable guidance for the adjustment and optimization of the band gap in hydrazine solution processed Sb2(S1-xSex)3 alloy films for the future fabrication of improved photovoltaic devices.

  11. Outcome of the First wwPDB/CCDC/D3R Ligand Validation Workshop

    DOE PAGESBeta

    Adams, Paul  D.; Aertgeerts, Kathleen; Bauer, Cary; Bell, Jeffrey A.; Berman, Helen  M.; Bhat, Talapady  N.; Blaney, Jeff  M.; Bolton, Evan; Bricogne, Gerard; Brown, David; et al

    2016-04-05

    Crystallographic studies of ligands bound to biological macromolecules (proteins and nucleic acids) represent an important source of information concerning drug-target interactions, providing atomic level insights into the physical chemistry of complex formation between macromolecules and ligands. Of the more than 115,000 entries extant in the Protein Data Bank archive, ~75% include at least one non-polymeric ligand. Ligand geometrical and stereochemical quality, the suitability of ligand models for in silico drug discovery/design, and the goodness-of-fit of ligand models to electron density maps vary widely across the archive. We describe the proceedings and conclusions from the first Worldwide Protein Data Bank/Cambridge Crystallographicmore » Data Centre/Drug Design Data Resource (wwPDB/CCDC/D3R) Ligand Validation Workshop held at the Research Collaboratory for Structural Bioinformatics at Rutgers University on July 30-31, 2015. Experts in protein crystallography from academe and industry came together with non-profit and for-profit software providers for crystallography and with experts in computational chemistry and data archiving to discuss and make recommendations on best practices, as framed by a series of questions central to structural studies of macromolecule-ligand complexes. What data concerning bound ligands should be archived in the Protein Data Bank? How should the ligands be best represented? How should structural models of macromolecule-ligand complexes be validated? What supplementary information should accompany publications of structural studies of biological macromolecules? Consensus recommendations on best practices developed in response to each of these questions are provided, together with some details regarding implementation. Important issues addressed but not resolved at the workshop are also enumerated.« less

  12. Outcome of the First wwPDB/CCDC/D3R Ligand Validation Workshop.

    PubMed

    Adams, Paul D; Aertgeerts, Kathleen; Bauer, Cary; Bell, Jeffrey A; Berman, Helen M; Bhat, Talapady N; Blaney, Jeff M; Bolton, Evan; Bricogne, Gerard; Brown, David; Burley, Stephen K; Case, David A; Clark, Kirk L; Darden, Tom; Emsley, Paul; Feher, Victoria A; Feng, Zukang; Groom, Colin R; Harris, Seth F; Hendle, Jorg; Holder, Thomas; Joachimiak, Andrzej; Kleywegt, Gerard J; Krojer, Tobias; Marcotrigiano, Joseph; Mark, Alan E; Markley, John L; Miller, Matthew; Minor, Wladek; Montelione, Gaetano T; Murshudov, Garib; Nakagawa, Atsushi; Nakamura, Haruki; Nicholls, Anthony; Nicklaus, Marc; Nolte, Robert T; Padyana, Anil K; Peishoff, Catherine E; Pieniazek, Susan; Read, Randy J; Shao, Chenghua; Sheriff, Steven; Smart, Oliver; Soisson, Stephen; Spurlino, John; Stouch, Terry; Svobodova, Radka; Tempel, Wolfram; Terwilliger, Thomas C; Tronrud, Dale; Velankar, Sameer; Ward, Suzanna C; Warren, Gregory L; Westbrook, John D; Williams, Pamela; Yang, Huanwang; Young, Jasmine

    2016-04-01

    Crystallographic studies of ligands bound to biological macromolecules (proteins and nucleic acids) represent an important source of information concerning drug-target interactions, providing atomic level insights into the physical chemistry of complex formation between macromolecules and ligands. Of the more than 115,000 entries extant in the Protein Data Bank (PDB) archive, ∼75% include at least one non-polymeric ligand. Ligand geometrical and stereochemical quality, the suitability of ligand models for in silico drug discovery and design, and the goodness-of-fit of ligand models to electron-density maps vary widely across the archive. We describe the proceedings and conclusions from the first Worldwide PDB/Cambridge Crystallographic Data Center/Drug Design Data Resource (wwPDB/CCDC/D3R) Ligand Validation Workshop held at the Research Collaboratory for Structural Bioinformatics at Rutgers University on July 30-31, 2015. Experts in protein crystallography from academe and industry came together with non-profit and for-profit software providers for crystallography and with experts in computational chemistry and data archiving to discuss and make recommendations on best practices, as framed by a series of questions central to structural studies of macromolecule-ligand complexes. What data concerning bound ligands should be archived in the PDB? How should the ligands be best represented? How should structural models of macromolecule-ligand complexes be validated? What supplementary information should accompany publications of structural studies of biological macromolecules? Consensus recommendations on best practices developed in response to each of these questions are provided, together with some details regarding implementation. Important issues addressed but not resolved at the workshop are also enumerated. PMID:27050687

  13. Chemo-genomic interrogation of CEBPA mutated AML reveals recurrent CSF3R mutations and subgroup sensitivity to JAK inhibitors.

    PubMed

    Lavallée, Vincent-Philippe; Krosl, Jana; Lemieux, Sébastien; Boucher, Geneviève; Gendron, Patrick; Pabst, Caroline; Boivin, Isabel; Marinier, Anne; Guidos, Cynthia J; Meloche, Sylvain; Hébert, Josée; Sauvageau, Guy

    2016-06-16

    In this study, we analyzed RNA-sequencing data of 14 samples characterized by biallelic CEBPA (CEBPA(bi)) mutations included in the Leucegene collection of 415 primary acute myeloid leukemia (AML) specimens, and describe for the first time high frequency recurrent mutations in the granulocyte colony-stimulating factor receptor gene CSF3R, which signals through JAK-STAT proteins. Chemical interrogation of these primary human specimens revealed a uniform and specific sensitivity to all JAK inhibitors tested irrespective of their CSF3R mutation status, indicating a general sensitization of JAK-STAT signaling in this leukemia subset. Altogether, these results identified the co-occurrence of mutations in CSF3R and CEBPA in a well-defined AML subset, which uniformly responds to JAK inhibitors and paves the way to personalized clinical trials for this disease. PMID:27034432

  14. Precision polarizability measurements of atomic cesium's 8 s 2S1 / 2 and 9 s 2S1 / 2 states

    NASA Astrophysics Data System (ADS)

    Weaver, Hannah; Kortyna, Andrew

    2013-05-01

    We report hyperfine-resolved scalar polarizabilities for cesium's 8 s 2S1 / 2 and 9 s 2S1 / 2 states using resonant two-photon spectroscopy. Two single-mode, external-cavity diode lasers drive the 6 s 2S1 / 2 --> 6 p 2P1 / 2 --> ns 2S1 / 2 transition (n = 8 or 9). Both laser beams are split and counter-propagate through an effusive beam and a vapor cell. An electric field applied across two parallel plates imposes Stark shifts on the ns 2S1 / 2 levels in the effusive beam. Electric-field strengths are measured in situ. The laser frequency is calibrated in the vapor cell using a phase modulation technique, with the modulation frequency referenced to the ground-state hyperfine splitting of atomic rubidium. Our measured 8 s 2S1 / 2 polarizability, 38370 +/- 380 a03, agrees with previous theory and experiments. Our measured 9 s 2S1 / 2 polarizability, 150700 +/- 1100 a03, agrees within two sigma of theory, but we are unaware of previous measurements. We also verify that these polarizabilities are independent of the hyperfine levels, placing upper limits on the differential polarizabilities of 200 +/- 260 a03 for the 8 s 2S1 / 2 state and 490 +/- 450 a03 for the 9 s 2S1 / 2 state. Supported by the National Science Foundation under Grant PHY-0653107.

  15. Astrocyte IP3R2-dependent Ca2+ signaling is not a major modulator of neuronal pathways governing behavior

    PubMed Central

    Petravicz, Jeremy; Boyt, Kristen M.; McCarthy, Ken D.

    2014-01-01

    Calcium-dependent release of gliotransmitters by astrocytes is reported to play a critical role in synaptic transmission and be necessary for long-term potentiation (LTP), long-term depression (LTD) and other forms of synaptic modulation that are correlates of learning and memory. Further, physiological processes reported to be dependent on Ca2+ fluxes in astrocytes include functional hyperemia, sleep, and regulation of breathing. The preponderance of findings indicate that most, if not all, receptor dependent Ca2+ fluxes within astrocytes are due to release of Ca2+ through IP3 receptor/channels in the endoplasmic reticulum. Findings from several laboratories indicate that astrocytes only express IP3 receptor type 2 (IP3R2) and that a knockout of IP3R2 obliterates the GPCR-dependent astrocytic Ca2+ responses. Assuming that astrocytic Ca2+ fluxes play a critical role in synaptic physiology, it would be predicted that elimination of astrocytic Ca2+ fluxes would lead to marked changes in behavioral tests. Here, we tested this hypothesis by conducting a broad series of behavioral tests that recruited multiple brain regions, on an IP3R2 conditional knockout mouse model. We present the novel finding that behavioral processes are unaffected by lack of astrocyte IP3R-mediated Ca2+ signals. IP3R2 cKO animals display no change in anxiety or depressive behaviors, and no alteration to motor and sensory function. Morris water maze testing, a behavioral correlate of learning and memory, was unaffected by lack of astrocyte IP3R2-mediated Ca2+-signaling. Therefore, in contrast to the prevailing literature, we find that neither receptor-driven astrocyte Ca2+ fluxes nor, by extension, gliotransmission is likely to be a major modulating force on the physiological processes underlying behavior. PMID:25429263

  16. Paclitaxel accelerates spontaneous calcium oscillations in cardiomyocytes by interacting with NCS-1 and the InsP3R

    PubMed Central

    Zhang, Kun; Heidrich, Felix M.; DeGray, Brenda; Boehmerle, Wolfgang; Ehrlich, Barbara E.

    2010-01-01

    Paclitaxel (Taxol) is a microtubule-stabilizing compound that is used for cancer chemotherapy. However, Taxol administration is limited by serious side effects including cardiac arrhythmia, which cannot be explained by its microtubule-stabilizing effect. Recently, neuronal calcium sensor 1 (NCS-1), a calcium binding protein that modulates the inositol-1,4,5-trisphosphate receptor (InsP3R), was described as a binding partner of Taxol and as a substrate of calpain. We examined calcium signaling processes in cardiomyocytes after treatment with Taxol to investigate the basis of Taxol-induced cardiac arrhythmia. After treating isolated neonatal rat ventricular myocytes with a therapeutic concentration of Taxol for several hours live cell imaging experiments showed that the frequency of spontaneous calcium oscillations significantly increased. This effect was not mimicked by other tubulin-stabilizing agents. However, it was prevented by inhibiting the InsP3R. Taxol treated cells had increased expression of NCS-1, an effect also detectable after Taxol administration in vivo. Short hairpin RNA mediated knock down of NCS-1 decreased InsP3R dependent intracellular calcium release, whereas Taxol treatment, that increased NCS-1 levels, increased InsP3R dependent calcium release. The effects of Taxol were ryanodine receptor independent. At the single channel level Taxol and NCS-1 mediated an increase in InsP3R activity. Calpain activity was not affected by Taxol in cardiomyocytes suggesting a calpain independent signaling pathway. In short, our study shows that Taxol impacts calcium signaling and calcium oscillations in cardiomyocytes through NCS-1 and the InsP3R. PMID:20801127

  17. Endogenous mitigation of H2S inside of the landfills.

    PubMed

    Fang, Yuan; Zhong, Zhong; Shen, Dongsheng; Du, Yao; Xu, Jing; Long, Yuyang

    2016-02-01

    Vast quantities of hydrogen sulfide (H2S) emitted from landfill sites require urgent disposal. The current study focused on source control and examined the migration and conversion behavior of sulfur compounds in two lab-scale simulated landfills with different operation modes. It aimed to explore the possible strategies and mechanisms for H2S endogenous mitigation inside of landfills during decomposition. It was found that the strength of H2S emissions from the landfill sites was dependent on the municipal solid waste (MSW) degradation speed and vertical distribution of sulfide. Leachate recirculation can shorten both the H2S influence period and pollution risk to the surrounding environment. H2S endogenous mitigation may be achieved by chemical oxidation, biological oxidation, adsorption, and/or precipitation in different stages. Migration and conversion mainly affected H2S release behavior during the initial stabilization phase in the landfill. Microbial activities related to sulfur, nitrogen, and iron can further promote H2S endogenous mitigation during the high reducing phase. Thus, H2S endogenous mitigation can be effectively enhanced via control of the aforementioned processes. PMID:26423286

  18. H2S, a novel gasotransmitter, involves in gastric accommodation.

    PubMed

    Xiao, Ailin; Wang, Hongjuan; Lu, Xin; Zhu, Jianchun; Huang, Di; Xu, Tonghui; Guo, Jianqiang; Liu, Chuanyong; Li, Jingxin

    2015-01-01

    H2S is produced mainly by two enzymes:cystathionine-β-synthase (CBS) and cystathionine-γ-lyase (CSE), using L-cysteine (L-Cys) as the substrate. In this study, we investigated the role of H2S in gastric accommodation using CBS(+/-) mice, immunohistochemistry, immunoblot, methylene blue assay, intragastric pressure (IGP) recording and electrical field stimulation (EFS). Mouse gastric fundus expressed H2S-generating enzymes (CBS and CSE) and generated detectable amounts of H2S. The H2S donor, NaHS or L-Cys, caused a relaxation in either gastric fundus or body. The gastric compliance was significantly increased in the presence of L-Cys (1 mM). On the contrary, AOAA, an inhibitor for CBS, largely inhibited gastric compliance. Consistently, CBS(+/-) mice shows a lower gastric compliance. However, PAG, a CSE inhibitor, had no effect on gastric compliances. L-Cys enhances the non-adrenergic, non-cholinergic (NANC) relaxation of fundus strips, but AOAA reduces the magnitude of relaxations to EFS. Notably, the expression level of CBS but not CSE protein was elevated after feeding. Consistently, the production of H2S was also increased after feeding in mice gastric fundus. In addition, AOAA largely reduced food intake and body weight in mice. Furthermore, a metabolic aberration of H2S was found in patients with functional dyspepsia (FD). In conclusion, endogenous H2S, a novel gasotransmitter, involves in gastric accommodation. PMID:26531221

  19. H2S, a novel gasotransmitter, involves in gastric accommodation

    PubMed Central

    Xiao, Ailin; Wang, Hongjuan; Lu, Xin; Zhu, Jianchun; Huang, Di; Xu, Tonghui; Guo, Jianqiang; Liu, Chuanyong; Li, Jingxin

    2015-01-01

    H2S is produced mainly by two enzymes:cystathionine-β-synthase (CBS) and cystathionine-γ-lyase (CSE), using L-cysteine (L-Cys) as the substrate. In this study, we investigated the role of H2S in gastric accommodation using CBS+/− mice, immunohistochemistry, immunoblot, methylene blue assay, intragastric pressure (IGP) recording and electrical field stimulation (EFS). Mouse gastric fundus expressed H2S-generating enzymes (CBS and CSE) and generated detectable amounts of H2S. The H2S donor, NaHS or L-Cys, caused a relaxation in either gastric fundus or body. The gastric compliance was significantly increased in the presence of L-Cys (1 mM). On the contrary, AOAA, an inhibitor for CBS, largely inhibited gastric compliance. Consistently, CBS+/− mice shows a lower gastric compliance. However, PAG, a CSE inhibitor, had no effect on gastric compliances. L-Cys enhances the non-adrenergic, non-cholinergic (NANC) relaxation of fundus strips, but AOAA reduces the magnitude of relaxations to EFS. Notably, the expression level of CBS but not CSE protein was elevated after feeding. Consistently, the production of H2S was also increased after feeding in mice gastric fundus. In addition, AOAA largely reduced food intake and body weight in mice. Furthermore, a metabolic aberration of H2S was found in patients with functional dyspepsia (FD). In conclusion, endogenous H2S, a novel gasotransmitter, involves in gastric accommodation. PMID:26531221

  20. Differential transcriptional regulation by mouse single-minded 2s.

    PubMed

    Metz, Richard P; Kwak, Hyeong-Il; Gustafson, Tanya; Laffin, Brian; Porter, Weston W

    2006-04-21

    Single-minded 1 and 2 are unique members of the basic helix-loop-helix Per-Arnt-Sim family as they are transcriptional repressors. Here we report the identification and transcriptional characterization of mouse Sim2s, a splice variant of Sim2, which is missing the carboxyl Pro/Ala-rich repressive domain. Sim2s is expressed at high levels in kidney and skeletal muscle; however, the ratio of Sim2 to Sim2s mRNA differs between these tissues. Similar to full-length Sim2, Sim2s interacts with Arnt and to a lesser extent, Arnt2. The effects of Sim2s on transcriptional regulation through hypoxia, dioxin, and central midline response elements are different than that of full-length Sim2. Specifically, Sim2s exerts a less repressive effect on hypoxia-induced gene expression than full-length Sim2, but is just as effective as Sim2 at repressing TCDD-induced gene expression from a dioxin response element. Interestingly, Sim2s bind to and activates expression from a central midline response element-controlled reporter through an Arnt transactivation domain-dependent mechanism. The differences in expression pattern, protein interactions, and transcriptional activities between Sim2 and Sim2s may reflect differential roles each isoform plays during development or in tissue-specific effects on other protein-mediated pathways. PMID:16484282

  1. Structural characterization of metallopeptides designed as scaffolds for the stabilization of nickel(II)-Fe(4)S(4) bridged assemblies by X-ray absorption spectroscopy.

    PubMed

    Musgrave, Kristin B; Laplaza, Catalina E; Holm, R H; Hedman, Britt; Hodgson, Keith O

    2002-03-27

    In earlier work, de novo designed peptides with a helix-loop-helix motif and 63 residues have been synthesized as potential scaffolds for stabilization of the [Ni(II)-X-Fe(4)S(4)] bridged assembly that is the spectroscopically deduced structure of the A-Cluster in clostridial carbon monoxide dehydrogenase. The 63mers contain a consensus tricysteinyl ferredoxin domain in the loop for binding an Fe(4)S(4) cluster and Cys and His residues proximate to the loop for binding Ni(II), with one Cys residue designed as the bridge X. The metallopeptides HC(4)H(2)-[Fe(4)S(4)]-Ni and HC(5)H-[Fe(4)S(4)]-M, containing three His and one Cys residue for Ni(II) coordination and two His and two Cys residues for binding M = Ni(II) and Co(II), have been examined by Fe-, Ni-, and Co-K edge spectroscopy and EXAFS. All peptides bind an [Fe(4)S(4)](2+) cubane-type cluster. Interpretation of the Ni and Co data is complicated by the presence of a minority population of six-coordinate species with low Z ligands, designated for simplicity as [M(OH(2))(6)](2+). Best fits of the data were obtained with ca. 20% [M(OH(2))(6)](2+) and ca. 80% M(II) with mixed N/S coordination. The collective XAS results for HC(4)H(2)-[Fe(4)S(4)]-Ni and HC(5)H-[Fe(4)S(4)]-M demonstrate the presence of an Fe(4)S(4) cluster and support the existence of the distorted square-planar coordination units [Ni(II)(S.Cys)(N.His)(3)] and [Ni(II)(S.Cys)(2)(N.His)(2)] in the HC(4)H(2) and HC(5)H metallopeptides, respectively. In the HC(5)H metallopeptide, tetrahedral [Co(II)(S.Cys)(2)(N.His)(2)] is present. We conclude that the designed scaffolded binding sites, including Ni-(mu(2)-S.Cys)-Fe bridges, have been achieved. This is the first XAS study of a de novo designed metallopeptide intended to stabilize a bridged biological assembly, and one of a few XAS analyses of metal derivatives of designed peptides. The scaffolding concept should be extendable to other bridged metal assemblies. PMID:11902899

  2. Chemiluminescent Probes for Imaging H2S in Living Animals†

    PubMed Central

    Cao, J.; Lopez, R.; Thacker, J.M.; Moon, J.Y.; Jiang, C.; Morris, S.N.S.; Bauer, J.H.; Tao, P.; Mason, R.P.

    2015-01-01

    Hydrogen sulphide (H2S) is an endogenous mediator of human health and disease, but precise measurement in living cells and animals remains a considerable challenge. We report the total chemical synthesis and characterization of three 1,2-dioxetane chemiluminescent reaction-based H2S probes, CHS-1, CHS-2, and CHS-3. Upon treatment with H2S at physiological pH, these probes display instantaneous light emission that is sustained for over an hour with high selectivity against other reactive sulphur, oxygen, and nitrogen species. Analysis of the phenol/phenolate equilibrium and atomic charges has provided a generally applicable predictive model to design improved chemiluminescent probes. The utility of these chemiluminescent reagents was demonstrated by applying CHS-3 to detect cellularly generated H2S using a multi-well plate reader and to image H2S in living mice using CCD camera technology. PMID:25709805

  3. Altered Sulfide (H2S) Metabolism in Ethylmalonic Encephalopathy

    PubMed Central

    Tiranti, Valeria; Zeviani, Massimo

    2013-01-01

    Hydrogen sulfide (sulfide, H2S) is a colorless, water-soluble gas with a typical smell of rotten eggs. In the past, it has been investigated for its role as a potent toxic gas emanating from sewers and swamps or as a by-product of industrial processes. At high concentrations, H2S is a powerful inhibitor of cytochrome c oxidase; in trace amounts, it is an important signaling molecule, like nitric oxide (NO) and carbon monoxide (CO), together termed “gasotransmitters.” This review will cover the physiological role and the pathogenic effects of H2S, focusing on ethylmalonic encephalopathy, a human mitochondrial disorder caused by genetic abnormalities of sulfide metabolism. We will also discuss the options that are now conceivable for preventing genetically driven chronic H2S toxicity, taking into account that a complete understanding of the physiopathology of H2S has still to be achieved. PMID:23284046

  4. Spectroscopic changes during a single turnover of biotin synthase: destruction of a [2Fe-2S] cluster accompanies sulfur insertion.

    PubMed

    Ugulava, N B; Sacanell, C J; Jarrett, J T

    2001-07-27

    Biotin synthase catalyzes the insertion of a sulfur atom between the saturated C6 and C9 carbons of dethiobiotin. Catalysis requires AdoMet and flavodoxin and generates 5'-deoxyadenosine and methionine, suggesting that biotin synthase is an AdoMet-dependent radical enzyme. Biotin synthase (BioB) is aerobically purified as a dimer of 38.4 kDa monomers that contains 1-1.5 [2Fe-2S](2+) clusters per monomer and can be reconstituted with exogenous iron, sulfide, and reductants to contain up to two [4Fe-4S] clusters per monomer. The iron-sulfur clusters may play a dual role in biotin synthase: a reduced iron-sulfur cluster is probably involved in radical generation by mediating the reductive cleavage of AdoMet, while recent in vitro labeling studies suggest that an iron-sulfur cluster also serves as the immediate source of sulfur for the biotin thioether ring. Consistent with this dual role for iron-sulfur clusters in biotin synthase, we have found that the protein is stable, containing one [2Fe-2S](2+) cluster and one [4Fe-4S](2+) cluster per monomer. In the present study, we demonstrate that this mixed cluster state is essential for optimal activity. We follow changes in the Fe and S content and UV/visible and EPR spectra of the enzyme during a single turnover and conclude that during catalysis the [4Fe-4S](2+) cluster is preserved while the [2Fe-2S](2+) cluster is destroyed. We propose a mechanism for incorporation of sulfur into dethiobiotin in which a sulfur atom is oxidatively extracted from the [2Fe-2S](2+) cluster. PMID:11444982

  5. NsrR from Streptomyces coelicolor Is a Nitric Oxide-sensing [4Fe-4S] Cluster Protein with a Specialized Regulatory Function*

    PubMed Central

    Crack, Jason C.; Munnoch, John; Dodd, Erin L.; Knowles, Felicity; Al Bassam, Mahmoud M.; Kamali, Saeed; Holland, Ashley A.; Cramer, Stephen P.; Hamilton, Chris J.; Johnson, Michael K.; Thomson, Andrew J.; Hutchings, Matthew I.; Le Brun, Nick E.

    2015-01-01

    The Rrf2 family transcription factor NsrR controls expression of genes in a wide range of bacteria in response to nitric oxide (NO). The precise form of the NO-sensing module of NsrR is the subject of controversy because NsrR proteins containing either [2Fe-2S] or [4Fe-4S] clusters have been observed previously. Optical, Mössbauer, resonance Raman spectroscopies and native mass spectrometry demonstrate that Streptomyces coelicolor NsrR (ScNsrR), previously reported to contain a [2Fe-2S] cluster, can be isolated containing a [4Fe-4S] cluster. ChIP-seq experiments indicated that the ScNsrR regulon is small, consisting of only hmpA1, hmpA2, and nsrR itself. The hmpA genes encode NO-detoxifying flavohemoglobins, indicating that ScNsrR has a specialized regulatory function focused on NO detoxification and is not a global regulator like some NsrR orthologues. EMSAs and DNase I footprinting showed that the [4Fe-4S] form of ScNsrR binds specifically and tightly to an 11-bp inverted repeat sequence in the promoter regions of the identified target genes and that DNA binding is abolished following reaction with NO. Resonance Raman data were consistent with cluster coordination by three Cys residues and one oxygen-containing residue, and analysis of ScNsrR variants suggested that highly conserved Glu-85 may be the fourth ligand. Finally, we demonstrate that some low molecular weight thiols, but importantly not physiologically relevant thiols, such as cysteine and an analogue of mycothiol, bind weakly to the [4Fe-4S] cluster, and exposure of this bound form to O2 results in cluster conversion to the [2Fe-2S] form, which does not bind to DNA. These data help to account for the observation of [2Fe-2S] forms of NsrR. PMID:25771538

  6. Polysulfides Link H2S to Protein Thiol Oxidation

    PubMed Central

    Greiner, Romy; Pálinkás, Zoltán; Bäsell, Katrin; Becher, Dörte; Antelmann, Haike; Nagy, Péter

    2013-01-01

    Abstract Aims: Hydrogen sulfide (H2S) is suggested to act as a gaseous signaling molecule in a variety of physiological processes. Its molecular mechanism of action was proposed to involve protein S-sulfhydration, that is, conversion of cysteinyl thiolates (Cys-S−) to persulfides (Cys-S-S−). A central and unresolved question is how H2S—that is, a molecule with sulfur in its lowest possible oxidation state (−2)—can lead to oxidative thiol modifications. Results: Using the lipid phosphatase PTEN as a model protein, we find that the “H2S donor” sodium hydrosulfide (NaHS) leads to very rapid reversible oxidation of the enzyme in vitro. We identify polysulfides formed in NaHS solutions as the oxidizing species, and present evidence that sulfane sulfur is added to the active site cysteine. Polysulfide-mediated oxidation of PTEN was induced by all “H2S donors” tested, including sodium sulfide (Na2S), gaseous H2S, and morpholin-4-ium 4-methoxyphenyl(morpholino) phosphinodithioate (GYY4137). Moreover, we show that polysulfides formed in H2S solutions readily modify PTEN inside intact cells. Innovation: Our results shed light on the previously unresolved question of how H2S leads to protein thiol oxidation, and suggest that polysulfides formed in solutions of H2S mediate this process. Conclusion: This study suggests that the effects that have been attributed to H2S in previous reports may in fact have been mediated by polysulfides. It also supports the notion that sulfane sulfur rather than sulfide is the actual in vivo agent of H2S signaling. Antioxid. Redox Signal. 19, 1749–1765. PMID:23646934

  7. Search for Metastability of 2s Muonic Neon

    NASA Astrophysics Data System (ADS)

    Bach, Bernard Wilhelm

    1995-01-01

    An experiment was performed at the Paul Scherrer Institut (PSI) to establish the conditions for the metastability of the 2S-state of muonic neon. The muonic atoms were formed by stopping negative muons in the neon-filled target chamber of the PSI cyclotron trap. A pair of intrinsic germanium detectors were used in coincidence to search for the two photon decay of the 2S-state. Both energy and time information from two photon events were written to disk for off-line analysis. Data were accumulated for neon pressures of 40 and 400 Torr. The data were then searched for evidence of two photon transitions from the 2S-state. The germanium detectors were sensitive to the K-, L- and M- series x-ray photons (with energies between 10 and 300 keV) emitted during the cascade of the muonic neon ion. The detectors were also used alone to record single photon events of the K- and L-series x rays. The observed intensity ratios of the K-series x rays provided a lower limit on the initial population of the 2S-state. For the pressure condition of 40 Torr of neon, the 2S population was found to be 1.75% +/- .15% of the total cascade. The number of events at 40 Torr that could be attributed to two photon decays of the 2S-state was found to be 30 +/- 52 corresponding to a 2S population of 3.8% +/- 6.5%. At 400 Torr of neon the observed number of 2S two photon decays was 7 +/- 41, placing an upper limit on the 2S population at 0.9% +/- 5.1% of the total cascade. These results, to within the experimental uncertainties, can neither establish nor exclude the metastability of 2S muonic neon.

  8. Quick Fabrication and Thermoelectric Properties of Cu12Sb4S13 Tetrahedrite

    NASA Astrophysics Data System (ADS)

    Wang, Juyi; Gu, Ming; Bao, Yefeng; Li, Xiaoya; Chen, Lidong

    2016-04-01

    Tetrahedrites, comprised mainly of earth-abundant and environment-friendly elements, copper and sulfur, may pave the way to many new and low-cost thermoelectric energy generation opportunities. However, the preparation of tetrahedrites is time- and energy-consuming. In this paper, we study the melting process and the effect of the annealing time on the microstructure and thermoelectric properties of the Cu12Sb4S13 tetrahedrite, in an effort to shorten the synthesis (melting and annealing) time. Our results show that the Cu12Sb4S13 tetrahedrite phase forms in the melt during cooling. Shortening the melting time does not affect the formation of Cu12Sb4S13. The cooled ingot consists of the principal phase of Cu12Sb4S13 and two secondary phases, Cu3SbS4 and CuSbS2. It is found that prolonged annealing cannot eliminate the impurity phases in Cu12Sb4S13 tetrahedrite, has a small effect on the electrical resistivity, and a negligible effect on the Seebeck coefficient and the thermal conductivity of the tetrahedrite. All our samples have a ZT above 0.47 at 600 K and the maximum ZT obtained was 0.52 when the sample was annealed for 1 day. Based on our experimental results, the time for preparing the Cu12Sb4S13 tetrahedrite can be considerably shortened.

  9. Measurement of absolute cross sections for excitation of the 2s(2) S-1 -> 2s2p P-1 degrees transition in O+4

    NASA Technical Reports Server (NTRS)

    Smith, S. J.; Djuric, N.; Lozano, J. A.; Berrington, K. A.; Chutjian, A.

    2005-01-01

    Experimental cross sections are reported for the 1s(2)2s(2) S-1 -> 1s(2)2s2p P-1(o) transition in O+4 located at 19.689 eV. Use is made of the electron energy-loss method, using a merged electron-ion beam geometry. The center-of-mass interaction energies for the measurements in the S-1 -> P-1(o) transition are in the range 18 eV ( below the threshold) to 30 eV. Data are compared with other previous electron energy-loss measurements and with results of a 26 term R-matrix calculation that includes fine structure explicitly via the Breit-Pauli Hamiltonian. Clear resonance enhancement is observed in all experimental and theoretical results near the threshold for this S-1 -> P-1(o) transition.

  10. Electron Excitation Cross Sections for the 2s(sup 2)2p(sup 3) (sup 4)S -> 2s(sup 2)2p(sup 3) (sup 2d) ->2s2p(sup 4) (sup 4p) (Resonance) Transitions in Oil

    NASA Technical Reports Server (NTRS)

    Zuo, M.; Smith, S.; Chutjian, A.; Williams, I.; Tayal, S.; McLaughlin, B.

    1994-01-01

    Experimental and theoretical excitation cross sections are reported for the first forbidden transition xxx and the first allowed (resonance) transition xxx in OII. Use is made of electron-energy loss and merged beams methods. The electron energy range covered is 3.33 eV (threshold) to 15 eV for the S->D transition, and 14.9 eV (threshold) to 40 eV for the S->P transition. Care was taken to assess and minimize the metastable fraction of the OII beam. An electron mirror was designed and tested to reflect inelastically back-scattered electrons into the forward direction to account for the full range of polar scattering angles. Comparisons are made between present experiments and 11-state R-Matrix calculations. Calculations are also presented for the xxx transition.

  11. R3-R4 deletion in the PRNP gene is associated with Creutzfeldt-Jakob disease (CJD)

    SciTech Connect

    Cervenakova, L.; Brown, P.; Nagle, J.

    1994-09-01

    There are conflicting reports on the association of deletions in the PRNP gene on chromosome 20 with CJD, a rapidly progressive fatal spongiform encephalopathy. We accumulated data suggesting that a deletion of R3-R4 type (parts of the third and fourth repeats are deleted from the area of four repeating 24 bp sequences in the 5{prime} region of the gene) is causing CJD. Screening of 129 unaffected control individuals demonstrated presence of a deletion of R2 type in four (1.55% of the studied chromosomes), but none of them had the R3-R4 type. Of 181 screened patients with spongiform encephalopathies, two had a deletion of R3-R4 type with no other mutations in the coding sequence. Both patients had a classical rapidly progressive dementing disease and diffuse spongiform degeneration, and both cases were apparently sporadic. The same R3-R4 type of deletion was detected in three additional neuropathologically confirmed spongiform encephalopathy patients, of which two had other known pathogenic mutations in the PRNP gene: at codon 178 on the methionine allele exhibiting the phenotype of fatal familial insomnia, and codon 200 causing CJD with severe dementia; the third was a patient with iatrogenic CJD who developed the disease after treatment with growth hormone extracted from cadaveric human pituitary glands. In all cases the deletion coincided with a variant sequence at position 129 coding for methionine.

  12. IP3R deficit underlies loss of salivary fluid secretion in Sjögren’s Syndrome

    PubMed Central

    Teos, Leyla Y.; Zhang, Yu; Cotrim, Ana P.; Swaim, William; Won, Jon H.; Ambrus, Julian; Shen, Long; Bebris, Lolita; Grisius, Margaret; Jang, Shyh-Ing; Yule, David I.; Ambudkar, Indu S.; Alevizos, Ilias

    2015-01-01

    The autoimmune exocrinopathy, Sjögren’s syndrome (SS), is associated with secretory defects in patients, including individuals with mild lymphocytic infiltration and minimal glandular damage. The mechanism(s) underlying the secretory dysfunction is not known. We have used minor salivary gland biopsies from SS patients and healthy individuals to assess acinar cell function in morphologically intact glandular areas. We report that agonist-regulated intracellular Ca2+ release, critically required for Ca2+ entry and fluid secretion, is defective in acini from SS patients. Importantly, these acini displayed reduction in IP3R2 and IP3R3, but not AQP5 or STIM1. Similar decreases in IP3R and carbachol (CCh)-stimulated [Ca2+]i elevation were detected in acinar cells from lymphotoxin-alpha (LTα) transgenic (TG) mice, a model for (SS). Treatment of salivary glands from healthy individuals with LT α, a cytokine linked to disease progression in SS and IL14α mice, reduced Ca2+ signaling. Together, our findings reveal novel IP3R deficits in acinar cells that underlie secretory dysfunction in SS patients. PMID:26365984

  13. The Effects of Keyword Cues and 3R Strategy on Children's e-Book Reading

    ERIC Educational Resources Information Center

    Liang, T.-H.

    2015-01-01

    Various studies have found that electronic books (e-books) promote learning, but few works have examined the use of e-books along with an adaptive reading strategy for children. The current study implemented a method to extract keyword cues from e-books to support e-book reading with the read, recite and review (3R) strategy, and then examined the…

  14. Establishment and gene analysis of a cisplatin-resistant cell line, Sa-3R, derived from oral squamous cell carcinoma.

    PubMed

    Nakatani, Ken; Nakamura, Megumi; Uzawa, Katsuhiro; Wada, Takeshi; Seki, Naohiko; Tanzawa, Hideki; Fujita, Shigeyuki

    2005-04-01

    Cisplatin (CDDP) is widely used for chemotherapy of many malignancies, especially of oral squamous cell carcinoma (SCC). However, because the mechanism of resistance to CDDP is unclear, we established a CDDP-resistant cell line, Sa-3R, from a CDDP-sensitive cell line, Sa-3, which was derived from moderately differentiated SCC of the lower gingiva. The 3-(3,4-dimethyl-thiazol-2-yl) 2,5-diphenyltetrazolium bromide assay indicated that Sa-3R has 7.5-fold greater resistance to CDDP than Sa-3. Comparing gene expression levels in the cell lines using an in-house cDNA microarray, which represented 2,201 oral disease origin genes, many differentially expressed genes were identified. The ATP-binding cassette transporter genes (MDR-1, MRP-1, and MRP-2), and FANCONI, GRP58, FLJ12089, and SPINT-2 were up-regulated, whereas FOSL1, MRPS27, and PGK-1 were down-regulated. These results were confirmed by semiquantitative reverse transcriptase-polymerase chain reaction. The Sa-3/Sa-3R cell lines could be useful to identify the candidates responsible for the mechanism of CDDP-resistance and the up- or down-regulated genes identified by the gene expression profiles in the Sa-3R cell line may be, in part, associated with the mechanism. PMID:15756446

  15. Solid waste management in Asian countries: a review of solid waste minimisation (3'r) towards low carbon

    NASA Astrophysics Data System (ADS)

    Ali, N. E.; Sion, H. C.

    2014-02-01

    The amount of solid-waste generated in Asian countries has increased tremendously, mainly due to the improvement in living standards, rapid developments in technology, growth in economy and population in the cities. Solid waste management is a global issue and major challenge facing Asian countries and neglecting its management may have negative consequences on the environment. Waste composition data proves the developed countries to have generated more recyclable materials while developing countries produce more organic and less recyclable waste such as paper, plastic and aluminium. In this regard, increase in number of landfills and disposal sites, will have an impact on GHG (greenhouse gas) emissions and pollutants to air and water. Alternative methods should therefore be taken to reduce the volume of waste. Most Asian countries have adopted the 3R (reduce, reuse, recycle) concept in order to reduce solid waste and their governments have implemented laws and regulations in order to support this. Implementation of 3R is the major contributor to the solid waste minimization and it can improve the quality of environmental sustainability and reduction of carbon dioxide emission in to the atmosphere. Based on our review, most of the countries practicing the 3R concept in tandem with laws and regulations perform better than those that just practice the 3R concept without any laws and regulations. The paper suggests that every country must focus on the laws and regulations relating to solid waste minimization so that it could be easily implemented as outlined.

  16. Crystal Splitting in the Growth of Bi2S3

    SciTech Connect

    Tang, Jing; Alivisatos, A. Paul

    2006-06-15

    Novel Bi{sub 2}S{sub 3} nanostructures with a sheaf-like morphology are obtained via reaction of bismuth acetate-oleic acid complex with elemental sulfur in 1-octadecence. We propose these structures form by the splitting crystal growth mechanism, which is known to account for the morphology some mineral crystals assume in nature. By controlling the synthetic parameters, different forms of splitting, analogous to observed in minerals, are obtained in our case of Bi{sub 2}S{sub 3}. These new and complex Bi{sub 2}S{sub 3} nanostructures are characterized by TEM, SEM, XRD and ED.

  17. Exact Stochastic Simulation of a Calcium Microdomain Reveals the Impact of Ca2+ Fluctuations on IP3R Gating

    PubMed Central

    Wieder, Nicolas; Fink, Rainer; von Wegner, Frederic

    2015-01-01

    In this study, we numerically analyzed the nonlinear Ca2+-dependent gating dynamics of a single, nonconducting inositol 1,4,5-trisphosphate receptor (IP3R) channel, using an exact and fully stochastic simulation algorithm that includes channel gating, Ca2+ buffering, and Ca2+ diffusion. The IP3R is a ubiquitous intracellular Ca2+ release channel that plays an important role in the formation of complex spatiotemporal Ca2+ signals such as waves and oscillations. Dynamic subfemtoliter Ca2+ microdomains reveal low copy numbers of Ca2+ ions, buffer molecules, and IP3Rs, and stochastic fluctuations arising from molecular interactions and diffusion do not average out. In contrast to models treating calcium dynamics deterministically, the stochastic approach accounts for this molecular noise. We varied Ca2+ diffusion coefficients and buffer reaction rates to tune the autocorrelation properties of Ca2+ noise and found a distinct relation between the autocorrelation time τac, the mean channel open and close times, and the resulting IP3R open probability PO. We observed an increased PO for shorter noise autocorrelation times, caused by increasing channel open times and decreasing close times. In a pure diffusion model the effects become apparent at elevated calcium concentrations, e.g., at [Ca2+] = 25 μM, τac = 0.082 ms, the IP3R open probability increased by ≈20% and mean open times increased by ≈4 ms, compared to a zero noise model. We identified the inactivating Ca2+ binding site of IP3R subunits as the primarily noise-susceptible element of the De Young and Keizer model. Short Ca2+ noise autocorrelation times decrease the probability of Ca2+ association and consequently increase IP3R activity. These results suggest a functional role of local calcium noise properties on calcium-regulated target molecules such as the ubiquitous IP3R. This finding may stimulate novel experimental approaches analyzing the role of calcium noise properties on microdomain behavior

  18. Interaction Between ACE I/D and ACTN3 R557X Polymorphisms in Polish Competitive Swimmers.

    PubMed

    Grenda, Agata; Leońska-Duniec, Agata; Kaczmarczyk, Mariusz; Ficek, Krzysztof; Król, Paweł; Cięszczyk, Paweł; Zmijewski, Piotr

    2014-09-29

    We hypothesized that the ACE ID / ACTN3 R577X genotype combination was associated with sprint and endurance performance. Therefore, the purpose of the present study was to determine the interaction between both ACE ID and ACTN3 R577X polymorphisms and sprint and endurance performance in swimmers. Genomic DNA was extracted from oral epithelial cells using GenElute Mammalian Genomic DNA Miniprep Kit (Sigma, Germany). All samples were genotyped using a real-time poly- merase chain reaction. The ACE I/D and the ACTN3 R577X genotype frequencies met Hardy-Weinberg expectations in both swimmers and controls. When the two swimmer groups, long distance swimmers (LDS) and short distance swimmers (SDS), were compared with control subjects in a single test, a significant association was found only for the ACE polymorphism, but not for ACTN3. Additionally, four ACE/ACTN3 combined genotypes (ID/RX, ID/XX, II/RX and II/XX) were statistically significant for the LDS versus Control comparison, but none for the SDS versus Control comparison. The ACE I/D and the ACTN3 R577X polymorphisms did not show any association with sprint swimming, taken individually or in combination. In spite of numerous previous reports of associations with athletic status or sprint performance in other sports, the ACTN3 R577X polymorphism, in contrast to ACE I/D, was not significantly associated with elite swimming status when considered individually. However, the combined analysis of the two loci suggests that the co-occurrence of the ACE I and ACTN3 X alleles may be beneficial to swimmers who compete in long distance races. PMID:25414746

  19. CSF3R T618I is a highly prevalent and specific mutation in chronic neutrophilic leukemia

    PubMed Central

    Pardanani, A; Lasho, TL; Laborde, RR; Elliott, M; Hanson, CA; Knudson, RA; Ketterling, RP; Maxson, JE; Tyner, JW; Tefferi, A

    2014-01-01

    Truncation mutations of the receptor cytoplasmic domain for colony-stimulating factor 3 (CSF3R) are frequently seen in severe congenital neutropenia, whereas activating missense mutations affecting the extracellular domain (exon 14) have been described in hereditary neutrophilia and chronic neutrophilic leukemia (CNL). In order to clarify mutational frequency, specificity and phenotypic associations, we sequenced CSF3R exons 14–17 in 54 clinically suspected cases of CNL (n=35) or atypical chronic myeloid leukemia (aCML; n=19). Central review of these cases confirmed WHO-defined CNL in 12 patients, monoclonal gammopathy (MG)-associated CNL in 5 and WHO-defined aCML in 9. A total of 14 CSF3R mutations were detected in 13 patients, including 10 with CSF3RT618I (exon 14 mutation, sometimes annotated as CSF3R T595I). CSF3RT618I occurred exclusively in WHO-defined CNL with a mutational frequency of 83% (10 of 12 cases). CSF3R mutations were not seen in aCML or MG-associated CNL. CSF3RT618I was also absent among 170 patients with primary myelofibrosis (PMF; n=76) or chronic myelomonocytic leukemia (CMML; n=94). SETBP1 mutational frequencies in WHO-defined CNL, aCML, CMML and PMF were 33, 0, 7 and 3%, respectively. Four CSF3RT618I-mutated cases co-expressed SETBP1 mutations. We conclude that CSF3RT618I is a highly sensitive and specific molecular marker for CNL and should be incorporated into current diagnostic criteria. PMID:23604229

  20. Interaction Between ACE I/D and ACTN3 R557X Polymorphisms in Polish Competitive Swimmers

    PubMed Central

    Grenda, Agata; Leońska-Duniec, Agata; Kaczmarczyk, Mariusz; Ficek, Krzysztof; Król, Paweł; Cięszczyk, Paweł; Żmijewski, Piotr

    2014-01-01

    We hypothesized that the ACE ID / ACTN3 R577X genotype combination was associated with sprint and endurance performance. Therefore, the purpose of the present study was to determine the interaction between both ACE ID and ACTN3 R577X polymorphisms and sprint and endurance performance in swimmers. Genomic DNA was extracted from oral epithelial cells using GenElute Mammalian Genomic DNA Miniprep Kit (Sigma, Germany). All samples were genotyped using a real-time poly- merase chain reaction. The ACE I/D and the ACTN3 R577X genotype frequencies met Hardy-Weinberg expectations in both swimmers and controls. When the two swimmer groups, long distance swimmers (LDS) and short distance swimmers (SDS), were compared with control subjects in a single test, a significant association was found only for the ACE polymorphism, but not for ACTN3. Additionally, four ACE/ACTN3 combined genotypes (ID/RX, ID/XX, II/RX and II/XX) were statistically significant for the LDS versus Control comparison, but none for the SDS versus Control comparison. The ACE I/D and the ACTN3 R577X polymorphisms did not show any association with sprint swimming, taken individually or in combination. In spite of numerous previous reports of associations with athletic status or sprint performance in other sports, the ACTN3 R577X polymorphism, in contrast to ACE I/D, was not significantly associated with elite swimming status when considered individually. However, the combined analysis of the two loci suggests that the co-occurrence of the ACE I and ACTN3 X alleles may be beneficial to swimmers who compete in long distance races. PMID:25414746

  1. Hydrogeologic Assessment of the 4-S Land and Cattle CompanyRanch

    SciTech Connect

    Quinn, Nigel W.T.

    2006-04-10

    Hydrogeological assessment of the 4-S Land and Cattle Company (4-S Ranch) was conducted using a combination of field investigations and a survey of available literature from nearby agricultural water districts and other entities. The 4-S Ranch has been able to meet most of its own water needs providing irrigated pasture for beef cattle by an active program of shallow groundwater pumping in these miconfined aquifer above the Corcoran Clay. Comparison of groundwater pumping on the 4-S Ranch property with groundwater pumping in the adjacent Merquin and Stevinson Water Districts shows great similarity in the well screened depths and the quality of the groundwater produced by the well fields. The pump yield for the eight active production wells on the 4-S property are comparable to the production and drainage wells in the adjacent water districts. Like these Districts the 4-S Ranch lies close to the Valley trough in a historic discharge area. The 4-S Ranch is unique in that it is bounded and bisected by several major water conveyance facilities including Bear Creek. Although the large number of potential recharge structures would suggest significant groundwater conjunctive use potential the major well field development has occurred along the length of the Eastside Canal. The Eastside Canal is known to be leaky above the ''A'' Clay the Canal passes through sandy areas and experiences significant groundwater seepage. This seepage can be intercepted by adjacent groundwater wells. Pumping adjacent to, and along the alignment of the Canal, may induce higher rates of seepage from the Eastside Canal. Groundwater quality below and adjacent to the Eastside Canal is very good, reflecting the origin of this diverted water from the Merced River. Most of the pumpage occurs in a depth interval between 30 ft and 130 ft. Safe yield estimates made using the available data show that the 4-S Ranch has sufficient resources to meet its own needs. Further exploitation of the groundwater will

  2. Measurement of the muonium 1S-2S transition frequency

    SciTech Connect

    Jungmann, K.; Baird, P. E. G.; Barr, J. R. M.; Berkeland, D.; Boshier, M. G.; Braun, B.; Eaton, G. H.; Ferguson, A. I.; Geerds, H.; Hughes, V. W.; Maas, F.; Matthias, B. E.; Matousek, P.; Persaud, M.; Putlitz, G. zu; Reinhard, I.; Riis, E.; Sandars, P. G. H.; Schwarz, W.; Toner, W. T.

    1995-04-01

    Resonant ionization spectroscopy has been employed for measuring the 1{sup 2}S1/2-2{sup 2}S1/2 frequency difference in the hydrogen-like muonium atom to 2 455 529 002(33)(46) MHz. The 1S-2S two-photon transition was induced Doppler-free using two counter-propagating laser beams. The 2S state was photo-ionized by a third photon from the same laser field. The measurement agrees with QED theory within two standard deviations. The mass of the positive muon can be extracted from the isotope shifts in this transition to hydrogen and deuterium to 105.658 80(29)(43) MeV/c{sup 2}.

  3. 2. S. elevation of Engine Room, Boiler House and Pattern ...

    Library of Congress Historic Buildings Survey, Historic Engineering Record, Historic Landscapes Survey

    2. S. elevation of Engine Room, Boiler House and Pattern Room. - Central of Georgia Railway, Savannah Repair Shops & Terminal Facilities, Engine Boiler & Pattern Building, Bounded by West Broad, Jones, West Boundary & Hull Streets, Savannah, Chatham County, GA

  4. Soft-Chemistry Forms of Sn 2P 2S 6and CuInP 2S 6

    NASA Astrophysics Data System (ADS)

    Bourdon, X.; Cajipe, V. B.

    1998-11-01

    We present our attempts to prepare lamellar SnP2S6and CuInP2S6by metathesis reactions in aqueous media. Use of a SnCl4precursor unexpectedly led to the formation of the three-dimensional compound SnII2P2S6rather than SnIVP2S6. The crystallites thus obtained were about 65 nm in size, i.e., much larger than those previously synthesized from SnCl2. We correlate this with the smaller Sn/P ratio (<1), which implies fewer nucleation sites and probably enhanced particle growth in the present case. The product tested positive for second-harmonic generation (SHG) at room temperature (RT). Initial31P NMR-MAS spectroscopy data indicate that this material is in an intermediate state between the ferroelectric and paraelectric phases of crystalline Sn2P2S6. An analogous solution method readily yielded CuInP2S6, the first quaternary thiophosphate prepared via this soft-chemistry route. A rather small coherence length ≈27Å, equivalent to four layers, is found for this product; band broadening is also observed in the Raman spectrum. SHG measurements likewise revealed a signal for this material at RT; a non polar macroscopic state may, however, not be precluded, given the known order-disorder nature of the ferroelectric-paraelectric transition in crystalline CuInP2S6.

  5. Protonation and Proton-Coupled Electron Transfer at S-Ligated [4Fe-4S] Clusters

    PubMed Central

    Morris, Wesley D.; Darcy, Julia W.; Mayer, James M.

    2015-01-01

    Biological [Fe-S] clusters are increasingly recognized to undergo proton-coupled electron transfer (PCET), but the site of protonation, mechanism, and role for PCET remains largely unknown. Here we explore this reactivity with synthetic model clusters. Protonation of the arylthiolate-ligated [4Fe-4S] cluster [Fe4S4(SAr)4]2- (1, SAr = S-2,4-6-(iPr)3C6H2) leads to thiol dissociation, reversibly forming [Fe4S4(SAr)3L]1- (2) + ArSH (L = solvent, and/or conjugate base). Solutions of 2 + ArSH react with the nitroxyl radical TEMPO to give [Fe4S4(SAr)4]1- (1ox) and TEMPOH. This reaction involves PCET coupled to thiolate association and may proceed via the unobserved protonated cluster [Fe4S4(SAr)3(HSAr)]1-(1-H). Similar reactions with this and related clusters proceed comparably. An understanding of the PCET thermochemistry of this cluster system has been developed, encompassing three different redox levels and two protonation states. PMID:25965413

  6. Protonation and Proton-Coupled Electron Transfer at S-Ligated [4Fe-4S] Clusters.

    PubMed

    Saouma, Caroline T; Morris, Wesley D; Darcy, Julia W; Mayer, James M

    2015-06-15

    Biological [Fe-S] clusters are increasingly recognized to undergo proton-coupled electron transfer (PCET), but the site of protonation, mechanism, and role for PCET remains largely unknown. Here we explore this reactivity with synthetic model clusters. Protonation of the arylthiolate-ligated [4Fe-4S] cluster [Fe4 S4 (SAr)4 ](2-) (1, SAr=S-2,4-6-(iPr)3 C6 H2 ) leads to thiol dissociation, reversibly forming [Fe4 S4 (SAr)3 L](1-) (2) and ArSH (L=solvent, and/or conjugate base). Solutions of 2+ArSH react with the nitroxyl radical TEMPO to give [Fe4 S4 (SAr)4 ](1-) (1ox ) and TEMPOH. This reaction involves PCET coupled to thiolate association and may proceed via the unobserved protonated cluster [Fe4 S4 (SAr)3 (HSAr)](1-) (1-H). Similar reactions with this and related clusters proceed comparably. An understanding of the PCET thermochemistry of this cluster system has been developed, encompassing three different redox levels and two protonation states. PMID:25965413

  7. Predictions of exclusive ψ(2S) production at the LHC

    NASA Astrophysics Data System (ADS)

    Jones, S. P.; Martin, A. D.; Ryskin, M. G.; Teubner, T.

    2014-05-01

    The cross section for exclusive ψ(2S) ultraperipheral production at the LHC is calculated using gluon parametrizations extracted from exclusive J/ψ measurements performed at HERA and the LHC. Predictions are given at leading and next-to-leading order for pp centre-of-mass energies of 7, 8 and 14 TeV, assuming the non-relativistic approximation for the ψ(2S) wave function.

  8. Analysis of cardiovascular responses to the H2S donors Na2S and NaHS in the rat

    PubMed Central

    Yoo, Daniel; Jupiter, Ryan C.; Pankey, Edward A.; Reddy, Vishwaradh G.; Edward, Justin A.; Swan, Kevin W.; Peak, Taylor C.; Mostany, Ricardo

    2015-01-01

    Hydrogen sulfide (H2S) is an endogenous gaseous molecule formed from L-cysteine in vascular tissue. In the present study, cardiovascular responses to the H2S donors Na2S and NaHS were investigated in the anesthetized rat. The intravenous injections of Na2S and NaHS 0.03–0.5 mg/kg produced dose-related decreases in systemic arterial pressure and heart rate, and at higher doses decreases in cardiac output, pulmonary arterial pressure, and systemic vascular resistance. H2S infusion studies show that decreases in systemic arterial pressure, heart rate, cardiac output, and systemic vascular resistance are well-maintained, and responses to Na2S are reversible. Decreases in heart rate were not blocked by atropine, suggesting that the bradycardia was independent of parasympathetic activation and was mediated by an effect on the sinus node. The decreases in systemic arterial pressure were not attenuated by hexamethonium, glybenclamide, Nw-nitro-l-arginine methyl ester hydrochloride, sodium meclofenamate, ODQ, miconazole, 5-hydroxydecanoate, or tetraethylammonium, suggesting that ATP-sensitive potassium channels, nitric oxide, arachidonic acid metabolites, cyclic GMP, p450 epoxygenase metabolites, or large conductance calcium-activated potassium channels are not involved in mediating hypotensive responses to the H2S donors in the rat and that responses are not centrally mediated. The present data indicate that decreases in systemic arterial pressure in response to the H2S donors can be mediated by decreases in vascular resistance and cardiac output and that the donors have an effect on the sinus node independent of the parasympathetic system. The present data indicate that the mechanism of the peripherally mediated hypotensive response to the H2S donors is uncertain in the intact rat. PMID:26071540

  9. Crystal Structure of a Ube2S-Ubiquitin Conjugate.

    PubMed

    Lorenz, Sonja; Bhattacharyya, Moitrayee; Feiler, Christian; Rape, Michael; Kuriyan, John

    2016-01-01

    Protein ubiquitination occurs through the sequential formation and reorganization of specific protein-protein interfaces. Ubiquitin-conjugating (E2) enzymes, such as Ube2S, catalyze the formation of an isopeptide linkage between the C-terminus of a "donor" ubiquitin and a primary amino group of an "acceptor" ubiquitin molecule. This reaction involves an intermediate, in which the C-terminus of the donor ubiquitin is thioester-bound to the active site cysteine of the E2 and a functionally important interface is formed between the two proteins. A docked model of a Ube2S-donor ubiquitin complex was generated previously, based on chemical shift mapping by NMR, and predicted contacts were validated in functional studies. We now present the crystal structure of a covalent Ube2S-ubiquitin complex. The structure contains an interface between Ube2S and ubiquitin in trans that resembles the earlier model in general terms, but differs in detail. The crystallographic interface is more hydrophobic than the earlier model and is stable in molecular dynamics (MD) simulations. Remarkably, the docked Ube2S-donor complex converges readily to the configuration seen in the crystal structure in 3 out of 8 MD trajectories. Since the crystallographic interface is fully consistent with mutational effects, this indicates that the structure provides an energetically favorable representation of the functionally critical Ube2S-donor interface. PMID:26828794

  10. Crystal Structure of a Ube2S-Ubiquitin Conjugate

    PubMed Central

    Lorenz, Sonja; Bhattacharyya, Moitrayee; Feiler, Christian; Rape, Michael; Kuriyan, John

    2016-01-01

    Protein ubiquitination occurs through the sequential formation and reorganization of specific protein-protein interfaces. Ubiquitin-conjugating (E2) enzymes, such as Ube2S, catalyze the formation of an isopeptide linkage between the C-terminus of a “donor” ubiquitin and a primary amino group of an “acceptor” ubiquitin molecule. This reaction involves an intermediate, in which the C-terminus of the donor ubiquitin is thioester-bound to the active site cysteine of the E2 and a functionally important interface is formed between the two proteins. A docked model of a Ube2S-donor ubiquitin complex was generated previously, based on chemical shift mapping by NMR, and predicted contacts were validated in functional studies. We now present the crystal structure of a covalent Ube2S-ubiquitin complex. The structure contains an interface between Ube2S and ubiquitin in trans that resembles the earlier model in general terms, but differs in detail. The crystallographic interface is more hydrophobic than the earlier model and is stable in molecular dynamics (MD) simulations. Remarkably, the docked Ube2S-donor complex converges readily to the configuration seen in the crystal structure in 3 out of 8 MD trajectories. Since the crystallographic interface is fully consistent with mutational effects, this indicates that the structure provides an energetically favorable representation of the functionally critical Ube2S-donor interface. PMID:26828794

  11. Genetic Regulation of Development in Sorghum bicolor (VIII. Shoot Growth, Tillering, Flowering, Gibberellin Biosynthesis, and Phytochrome Levels Are Differentially Affected by Dosage of the ma3R Allele.

    PubMed Central

    Foster, K. R.; Miller, F. R.; Childs, K. L.; Morgan, P. W.

    1994-01-01

    Sorghum [Sorghum bicolor (L.) Moench] homozygous for ma3R lacks a type II, light-stable phytochrome of 123 kD and has a number of phenotypic characteristics consistent with the absence of functional phytochrome B. We have used plants heterozygous at Ma3 (Ma3/ma3R and ma3/ma3R) to determine the effect of dosage of ma3R on plant growth, flowering, gibberellin (GA) levels, and content of the 123-kD phytochrome. Both Ma3/ma3R and ma3/ma3R produced the same number of tillers per plant as their respective homozygous non-ma3R parents. Height of the heterozygotes was intermediate between the homozygous parents, although it was more similar to the non-ma3R genotypes. In both field and growth-chamber environments, the timing of floral initiation and anthesis in the heterozygotes also was intermediate, again more similar to non-ma3R plants. In Ma3/ma3R, levels of GA53, GA19, GA20, and GA1 were almost exactly intermediate between levels detected in Ma3/Ma3 and ma3R/ma3R plants. Immunoblot analysis indicated that there was less of the 123-kD phytochrome in Ma3/ma3R than in homozygous Ma3, whereas none was detected in ma3R/ma3R. The degree of dominance of Ma3 and ma3 over ma3R varies with phenotypic trait, indicating that mechanisms of activity of the 123-kD phytochrome vary among the biochemical processes involved in each phenotypic character. Although the heterozygotes were similar to homozygous Ma3 and ma3 plants in growth and flowering behavior, Ma3/ma3R contained 50% less of the bioactive GA (GA1) than non-ma3R genotypes. Thus, sensitivity to endogenous GAs also may be regulated by the 123-kD phytochrome. To fully regulate plant growth and development, two copies of Ma3 or ma3 are required to produce sufficient quantities of the light-stable, 123-kD phytochrome. PMID:12232257

  12. Free volume structure of realgar α-As4S4 by positron annihilation lifetime spectroscopy

    NASA Astrophysics Data System (ADS)

    Shpotyuk, O.; Ingram, A.; Demchenko, P.

    2015-04-01

    Atomic-deficient free volume structure of realgar α-As4S4, the low-temperature modification, of tetraarsenic tetrasulfide polymorphs, is studied using positron annihilation lifetime spectroscopy. Eventual channels of positron annihilation in this molecular crystal are shown to be connected with low electron density entities around cage As4S4 molecules composing realgar-type structure of monoclinic P21/n space group. The overlapped spaces of bond-free solid angles around S atoms forming self-closed As4S4 molecules contribute preferentially to positron trapping modes, while a competitive influence of bound positron-electron states (positronium) stabilized in intermolecular spaces occurs also to be essential in the decomposed lifetime spectra too.

  13. Classified computer configuration control system (C{sup 4}S), revision 3, user`s information

    SciTech Connect

    O`Callaghan, P.B.; Nelson, R.A.; Grambihler, A.J.

    1994-04-01

    The Classified Computer Configuration Control System (C{sup 4}S) allows security management to track pertinent information concerning classified computer systems in the scope of their control. Information is entered by the level security manager that is closest to the classified computer system. Managers that are further removed from systems can have consolidated information made available to them. C{sup 4}S can be used to generate reports that are as current as the last information that was entered into the database. C{sup 4}S offers data entry, data display, and data reporting. The user interface uses menus, entry forms, the mouse, and Hot Keys. C{sup 4}S provides help windows that are available at any time by pressing the F1 key. C{sup 4}S has help for each menu, data entry form, and general program information. You can browse a help window by pressing the arrows, page up, or page down keys. You control C{sup 4}S with program options selected from pull-down menus. You {open_quotes}select{close_quotes} by moving a highlight bar up and down or across the menu and pressing enter on one of the options. The highlight bar is moved using the arrow keys, mouse, or selection letters. Notice that a letter of each menu option is a different color from the other letters. This is the selection letter for that option. If you press the selection letter, the highlight bar will move to that option. You can also use a mouse to move the highlight bar to the option by moving the mouse pointer to the option and pressing the mouse button. Explanation of menu options or entry fields appear at the bottom of the screen. These explanations should help you use C{sup 4}S. If you need more help, it is available by pressing F1. C{sup 4}S will bring up a help window for the particular option you are working with. The authors of the program are P.B. O`Callaghan, A. J. Grambihler, and R.A. Nelson.

  14. Hadronic Production of psi(2S) Cross section and Polarization

    SciTech Connect

    Chung, Kwangzoo; /Carnegie Mellon U.

    2008-05-01

    The hadronic production cross section and the polarization of {psi}(2S) meson are measured by using the data from p{bar p} collisions at {radical}s = 1.96 TeV collected by the Collider Detector at Fermilab. The datasets used correspond to integrated luminosity of 1.1 fb{sup -1} and 800 pb{sup -1}, respectively. The decay {psi}(2S) {yields} {mu}{sup +}{mu}{sup -} is used to reconstruct {psi}(2S) mesons in the rapidity range |y({psi}(2S))| < 0.6. The coverage of the p{sub T} range is 2.0 GeV/c {le} p{sub T} ({psi}(2S)) < 30 GeV/c for the cross section analysis and pT {ge} 5 GeV/c for the polarization analysis. For events with p{sub T} ({psi}(2S)) > 2 GeV/c the integrated inclusive cross section multiplied by the branching ratio for dimuon decay is 3.17 {+-} 0.04 {+-} 0.28 nb . This result agrees with the CDF Run I measurement considering the increased center-of-mass energy from 1.8 TeV to 1.96 TeV. The polarization of the promptly produced {psi}(2S) mesons is found to be increasingly longitudinal as p{sub T} increases from 5 GeV/c to 30 GeV/c. The result is compared to contemporary theory models.

  15. Single minded 2-s (SIM2-s) gene is expressed in human GBM cells and involved in GBM invasion.

    PubMed

    He, Qiaowei; Li, Gang; Su, Yuhang; Shen, Jie; Liu, Qinglin; Ma, Xiangyu; Zhao, Peng; Zhang, Jian

    2010-03-15

    The human single-minded 2 (SIM2) gene is mapped within the Down syndrome critical region (DSCR) of chromosome 21 and its short splice variant SIM2-s is suggested to be a molecular target for cancer therapy. It has been shown that SIM2-s is expressed in colon, pancreatic and prostate tumors but not in their corresponding normal tissues. In present study, we found that SIM2-s was expressed in glioma tissues as well as in glioblastoma (GBM) cell lines but not in other brain tumors or normal cortex. The invasive potential of GBM cells was significantly decreased by RNA interference targeting SIM2-s, while the proliferation was not affected. Further investigation showed that the mRNA and protein levels of matrix metalloproteinase 2 (MMP-2) were downregulated in cells treated with SIM2-s siRNA, concomitance with the upregulation of tissue inhibitor of matrix metalloproteinase 2 (TIMP-2). Moreover, the enzymatic activity of MMP-2 was clearly decreased. Our results collectively suggested that SIM2-s expressed in gliomas selectively and played a role in GBM cells invasion, which may be partly associated with the expression of MMP-2 and TIMP-2. PMID:20448453

  16. Effective utilization of genetic information for athletes and coaches: focus on ACTN3 R577X polymorphism

    PubMed Central

    Kikuchi, Naoki; Nakazato, Koichi

    2015-01-01

    Training variants (type, intensity, and duration of exercise) can be selected according to individual aims and fitness assessment. Recently, various methods of resistance and endurance training have been used for muscle hypertrophy and VO2max improvement. Although several genetic variants are associated with elite athletic performance and muscle phenotypes, genetic background has not been used as variant for physical training. ACTN3 R577X is a well-studied genetic polymorphism. It is the only genotype associated with elite athletic performance in multiple cohorts. This association is strongly supported by mechanistic data from an Actn3-knockout mouse model. In this review, possible guidelines are discussed for effective utilization of ACTN3 R577X polymorphism for physical training. PMID:26526670

  17. Effective utilization of genetic information for athletes and coaches: focus on ACTN3 R577X polymorphism.

    PubMed

    Kikuchi, Naoki; Nakazato, Koichi

    2015-09-01

    Training variants (type, intensity, and duration of exercise) can be selected according to individual aims and fitness assessment. Recently, various methods of resistance and endurance training have been used for muscle hypertrophy and VO2max improvement. Although several genetic variants are associated with elite athletic performance and muscle phenotypes, genetic background has not been used as variant for physical training. ACTN3 R577X is a well-studied genetic polymorphism. It is the only genotype associated with elite athletic performance in multiple cohorts. This association is strongly supported by mechanistic data from an Actn3-knockout mouse model. In this review, possible guidelines are discussed for effective utilization of ACTN3 R577X polymorphism for physical training. PMID:26526670

  18. Efficient Approaches to S-alkyl-N-alkylisothioureas and Application to Novel Histamine H3R Antagonists.

    PubMed

    Yoneyama, Hiroki; Yamamoto, Daisuke; Yamatodani, Atsushi; Harusawa, Shinya

    2016-01-01

    S-Alkyl-N-alkylisothiourea compounds, which contain various cyclic amines, were synthesized using 3-phenylpropionyl isothiocyanate (PPI) to discover novel non-imidazole histamine H3 receptor (H3R) antagonists. The synthetic route was improved remarkably by using 2-nitrophenylacetyl isothiocyanate (NPAI). Among the synthesized compounds, N-[4-(4-chlorophenyl)butyl]-S-[3-piperidin-1-yl)propyl]isothiourea (1k, OUP-186) exhibited potent and selective antagonism against human H3R but not human H4R, in vitro. Of particular interest, they did not show antagonism for the histamine release in rat brain microdialysis in vivo, suggesting species-selective differences in antagonist affinities. Furthermore, in silico docking studies of OUP-186 and its C2-homolog (OUP-181) in human/rat H3Rs suggested that the structural difference of antagonist-docking sites between human and rat H3Rs was attributable to the Ala122/Val122 mutation. PMID:27592826

  19. Chronic neutrophilic leukemia with overexpression of EVI-1, and concurrent CSF3R and SETBP1 mutations: A case report

    PubMed Central

    ALTANGEREL, OTGONBAT; CAO, SHANNAN; MENG, JUANXIA; LIU, PENG; HAIYAN, GONG; XU, YUANFU; ZHAO, MINGFENG

    2015-01-01

    Chronic neutrophilic leukemia (CNL) is a rare type of myeloproliferative neoplasm, characterized by sustained neutrophilia, splenomegaly, bone marrow granulocytic hyperplasia (without evidence of dysplasia) and an absence of the Philadelphia chromosome. Thus far, ~150 cases of CNL have been described in the literature; however, none have demonstrated overexpression of the ecotropic viral integration site-1 (EVI-1, also known as MECOM) gene. The present study describes a case that fulfilled the World Health Organization diagnostic criteria for CNL, and was associated with overexpression of EVI-1, as well as novel concurrent mutations of colony stimulating factor 3 receptor (CSF3R) and SET binding protein-1 (SETBP1). In addition, the current study briefly reviewed the relevant literature regarding novel genetic findings associated with the diagnosis and treatment of CNL. To the best of our knowledge, this is the first case report of CNL with associated EVI-1 overexpression, and concurrent CSF3R and SETBP1 mutations. PMID:26622734

  20. MicroRNA-126 inhibits proliferation and metastasis by targeting pik3r2 in prostate cancer

    PubMed Central

    SONG, LEI; XIE, XUBIO; YU, SHAOJIE; PENG, FENGHUA; PENG, LONGKAI

    2016-01-01

    The dysregulation of miR-126 has been reported to correlate with the progression of several cancer types. The present study demonstrated that miR-126 was significantly downregulated in prostate cancer (PCa) tissues compared with normal prostate tissues. In vitro and in vivo studies indicated that forced overexpression of miR-126 significantly suppressed the proliferation of PCa cell lines. Additionally, a Transwell assay showed that enhanced expression of miR-126 inhibited metastasis in PCa in vitro. Furthermore, pik3r2 was confirmed to be a direct target of miR-126 in PCa. It was also shown that pik3r2 was upregulated in PCa tissues and this inversely correlated with miR-126 in PCa tissues. In conclusion, these results revealed that aberrant expression of miR-126 promoted the progression of PCa and may serve as a novel therapeutic biomarker for PCa. PMID:26677064

  1. Diffractive photoproduction of ψ(2 S) mesons at HERA

    NASA Astrophysics Data System (ADS)

    Adloff, C.; Andreev, V.; Andrieu, B.; Anthonis, T.; Astvatsatourov, A.; Babaev, A.; Bähr, J.; Baranov, P.; Barrelet, E.; Bartel, W.; Baumgartner, S.; Becker, J.; Beckingham, M.; Beglarian, A.; Behnke, O.; Beier, C.; Belousov, A.; Berger, Ch.; Berndt, T.; Bizot, J. C.; Böhme, J.; Boudry, V.; Braunschweig, W.; Brisson, V.; Bröker, H.-B.; Brown, D. P.; Brückner, W.; Bruncko, D.; Büsser, F. W.; Bunyatyan, A.; Burrage, A.; Buschhorn, G.; Bystritskaya, L.; Campbell, A. J.; Caron, S.; Cassol-Brunner, F.; Clarke, D.; Collard, C.; Contreras, J. G.; Coppens, Y. R.; Coughlan, J. A.; Cousinou, M.-C.; Cox, B. E.; Cozzika, G.; Cvach, J.; Dainton, J. B.; Dau, W. D.; Daum, K.; Davidsson, M.; Delcourt, B.; Delerue, N.; Demirchyan, R.; De Roeck, A.; De Wolf, E. A.; Diaconu, C.; Dingfelder, J.; Dixon, P.; Dodonov, V.; Dowell, J. D.; Droutskoi, A.; Dubak, A.; Duprel, C.; Eckerlin, G.; Eckstein, D.; Efremenko, V.; Egli, S.; Eichler, R.; Eisele, F.; Eisenhandler, E.; Ellerbrock, M.; Elsen, E.; Erdmann, M.; Erdmann, W.; Faulkner, P. J. W.; Favart, L.; Fedotov, A.; Felst, R.; Ferencei, J.; Ferron, S.; Fleischer, M.; Fleischmann, P.; Fleming, Y. H.; Flügge, G.; Fomenko, A.; Foresti, I.; Formánek, J.; Franke, G.; Frising, G.; Gabathuler, E.; Gabathuler, K.; Garvey, J.; Gassner, J.; Gayler, J.; Gerhards, R.; Gerlich, C.; Ghazaryan, S.; Goerlich, L.; Gogitidze, N.; Grab, C.; Grabski, V.; Grässler, H.; Greenshaw, T.; Grindhammer, G.; Hadig, T.; Haidt, D.; Hajduk, L.; Haller, J.; Haynes, W. J.; Heinemann, B.; Heinzelmann, G.; Henderson, R. C. W.; Hengstmann, S.; Henschel, H.; Heremans, R.; Herrera, G.; Herynek, I.; Hildebrandt, M.; Hilgers, M.; Hiller, K. H.; Hladký, J.; Höting, P.; Hoffmann, D.; Horisberger, R.; Hovhannisyan, A.; Hurling, S.; Ibbotson, M.; İşsever, Ç.; Jacquet, M.; Jaffre, M.; Janauschek, L.; Janssen, X.; Jemanov, V.; Jönsson, L.; Johnson, C.; Johnson, D. P.; Jones, M. A. S.; Jung, H.; Kant, D.; Kapichine, M.; Karlsson, M.; Karschnick, O.; Keil, F.; Keller, N.; Kennedy, J.; Kenyon, I. R.; Kermiche, S.; Kiesling, C.; Kjellberg, P.; Klein, M.; Kleinwort, C.; Kluge, T.; Knies, G.; Koblitz, B.; Kolya, S. D.; Korbel, V.; Kostka, P.; Kotelnikov, S. K.; Koutouev, R.; Koutov, A.; Kroseberg, J.; Krüger, K.; Kuhr, T.; Kurča, T.; Lamb, D.; Landon, M. P. J.; Lange, W.; Laštovička, T.; Laycock, P.; Lebailly, E.; Lebedev, A.; Leißner, B.; Lemrani, R.; Lendermann, V.; Levonian, S.; Lindstroem, M.; List, B.; Lobodzinska, E.; Lobodzinski, B.; Loginov, A.; Loktionova, N.; Lubimov, V.; Lüders, S.; Lüke, D.; Lytkin, L.; Malden, N.; Malinovski, E.; Malinovski, I.; Mangano, S.; Maraček, R.; Marage, P.; Marks, J.; Marshall, R.; Martyn, H.-U.; Martyniak, J.; Maxfield, S. J.; Meer, D.; Mehta, A.; Meier, K.; Meyer, A. B.; Meyer, H.; Meyer, J.; Meyer, P.-O.; Mikocki, S.; Milstead, D.; Mohrdieck, S.; Mondragon, M. N.; Moreau, F.; Morozov, A.; Morris, J. V.; Müller, K.; Murín, P.; Nagovizin, V.; Naroska, B.; Naumann, J.; Naumann, Th.; Nellen, G.; Newman, P. R.; Niebergall, F.; Niebuhr, C.; Nix, O.; Nowak, G.; Olsson, J. E.; Ozerov, D.; Panassik, V.; Pascaud, C.; Patel, G. D.; Peez, M.; Perez, E.; Petrukhin, A.; Phillips, J. P.; Pitzl, D.; Pöschl, R.; Potachnikova, I.; Povh, B.; Rädel, G.; Rauschenberger, J.; Reimer, P.; Reisert, B.; Risler, C.; Rizvi, E.; Robmann, P.; Roosen, R.; Rostovtsev, A.; Rusakov, S.; Rybicki, K.; Sankey, D. P. C.; Schätzel, S.; Scheins, J.; Schilling, F.-P.; Schleper, P.; Schmidt, D.; Schmidt, D.; Schmidt, S.; Schmitt, S.; Schneider, M.; Schoeffel, L.; Schöning, A.; Schörner, T.; Schröder, V.; Schultz-Coulon, H.-C.; Schwanenberger, C.; Sedlák, K.; Sefkow, F.; Shekelyan, V.; Sheviakov, I.; Shtarkov, L. N.; Sirois, Y.; Sloan, T.; Smirnov, P.; Soloviev, Y.; South, D.; Spaskov, V.; Specka, A.; Spitzer, H.; Stamen, R.; Stella, B.; Stiewe, J.; Strauch, I.; Straumann, U.; Swart, M.; Tchetchelnitski, S.; Thompson, G.; Thompson, P. D.; Tomasz, F.; Traynor, D.; Truöl, P.; Tsipolitis, G.; Tsurin, I.; Turnau, J.; Turney, J. E.; Tzamariudaki, E.; Udluft, S.; Uraev, A.; Urban, M.; Usik, A.; Valkár, S.; Valkárová, A.; Vallée, C.; Van Mechelen, P.; Vassiliev, S.; Vazdik, Y.; Vest, A.; Vichnevski, A.; Wacker, K.; Wagner, J.; Wallny, R.; Waugh, B.; Weber, G.; Wegener, D.; Werner, C.; Werner, N.; Wessels, M.; White, G.; Wiesand, S.; Wilksen, T.; Winde, M.; Winter, G.-G.; Wissing, Ch.; Wobisch, M.; Woehrling, E.-E.; Wünsch, E.; Wyatt, A. C.; Žáček, J.; Zálešák, J.; Zhang, Z.; Zhokin, A.; Zomer, F.; zur Nedden, M.; H1 Collaboration

    2002-08-01

    Results on diffractive photoproduction of ψ(2 S) mesons are presented using data collected between 1996 and 2000 with the H1 detector at the HERA ep collider. The data correspond to an integrated luminosity of 77 pb -1. The energy dependence of the diffractive ψ(2 S) cross section is found to be similar to or possibly somewhat steeper than that for J/ ψ mesons. The dependences of the elastic and proton dissociative ψ(2 S) photoproduction cross sections on the squared momentum transfer t at the proton vertex are measured. The t-dependence of the elastic channel, parametrised as ebt, yields belψ(2 S) =(4.31±0.57±0.46) GeV -2, compatible with that of the J/ ψ. For the proton dissociative channel the result bpdψ(2 S) =(0.59±0.13±0.12) GeV -2 is 2.3 standard deviations smaller than that measured for the J/ ψ. With proper account of the individual wavefunctions theoretical predictions based on perturbative QCD are found to describe the measurements well.

  2. A solid lithium superionic conductor Li11AlP2S12 with a thio-LISICON analogous structure.

    PubMed

    Zhou, Pengfei; Wang, Jianbin; Cheng, Fangyi; Li, Fujun; Chen, Jun

    2016-05-01

    A solid lithium superionic conductor Li11AlP2S12 with a thio-LISICON analogous structure has been synthesized for the first time by sintering at 500 °C (LAlPS500). Such a pure lithium ionic conductor shows a conductivity of 8.02 × 10(-4) S cm(-1) at 25 °C, a low Ea of 25.4 kJ mol(-1), and a wide electrochemical voltage window of higher than 5.0 V (vs. Li(+)/Li). This facilitation of Li ionic conduction suggests the potential application in solid lithium ion batteries. PMID:27068086

  3. Epac-protein kinase C alpha signaling in purinergic P2X3R-mediated hyperalgesia after inflammation.

    PubMed

    Gu, Yanping; Li, Guangwen; Chen, Yong; Huang, Li-Yen Mae

    2016-07-01

    Sensitization of purinergic P2X3 receptors (P2X3Rs) is a major mechanism contributing to injury-induced exaggerated pain responses. We showed in a previous study that cyclic adenosine monophosphate (cAMP)-dependent guanine nucleotide exchange factor 1 (Epac1) in rat sensory dorsal root ganglia (DRGs) is upregulated after inflammatory injury, and it plays a critical role in P2X3R sensitization by activating protein kinase C epsilon (PKCε) inside the cells. protein kinase C epsilon has been established as the major PKC isoform mediating injury-induced hyperalgesic responses. On the other hand, the role of PKCα in receptor sensitization was seldom considered. Here, we studied the participation of PKCα in Epac signaling in P2X3R-mediated hyperalgesia. The expression of both Epac1 and Epac2 and the level of cAMP in DRGs are greatly enhanced after complete Freund adjuvant (CFA)-induced inflammation. The expression of phosphorylated PKCα is also upregulated. Complete Freund adjuvant (CFA)-induced P2X3R-mediated hyperalgesia is not only blocked by Epac antagonists but also by the classical PKC isoform inhibitors, Go6976, and PKCα-siRNA. These CFA effects are mimicked by the application of the Epac agonist, 8-(4-chlorophenylthio)-2 -O-methyl-cAMP (CPT), in control rats, further confirming the involvement of Epacs. Because the application of Go6976 prior to CPT still reduces CPT-induced hyperalgesia, PKCα is downstream of Epacs to mediate the enhancement of P2X3R responses in DRGs. The pattern of translocation of PKCα inside DRG neurons in response to CPT or CFA stimulation is distinct from that of PKCε. Thus, in contrast to prevalent view, PKCα also plays an essential role in producing complex inflammation-induced receptor-mediated hyperalgesia. PMID:26963850

  4. Epac–protein kinase C alpha signaling in purinergic P2X3R-mediated hyperalgesia after inflammation

    PubMed Central

    Gu, Yanping; Li, Guangwen; Chen, Yong; Huang, Li-Yen Mae

    2016-01-01

    Abstract Sensitization of purinergic P2X3 receptors (P2X3Rs) is a major mechanism contributing to injury-induced exaggerated pain responses. We showed in a previous study that cyclic adenosine monophosphate (cAMP)–dependent guanine nucleotide exchange factor 1 (Epac1) in rat sensory dorsal root ganglia (DRGs) is upregulated after inflammatory injury, and it plays a critical role in P2X3R sensitization by activating protein kinase C epsilon (PKCε) inside the cells. protein kinase C epsilon has been established as the major PKC isoform mediating injury-induced hyperalgesic responses. On the other hand, the role of PKCα in receptor sensitization was seldom considered. Here, we studied the participation of PKCα in Epac signaling in P2X3R-mediated hyperalgesia. The expression of both Epac1 and Epac2 and the level of cAMP in DRGs are greatly enhanced after complete Freund adjuvant (CFA)–induced inflammation. The expression of phosphorylated PKCα is also upregulated. Complete Freund adjuvant (CFA)–induced P2X3R-mediated hyperalgesia is not only blocked by Epac antagonists but also by the classical PKC isoform inhibitors, Go6976, and PKCα-siRNA. These CFA effects are mimicked by the application of the Epac agonist, 8-(4-chlorophenylthio)-2 -O-methyl-cAMP (CPT), in control rats, further confirming the involvement of Epacs. Because the application of Go6976 prior to CPT still reduces CPT-induced hyperalgesia, PKCα is downstream of Epacs to mediate the enhancement of P2X3R responses in DRGs. The pattern of translocation of PKCα inside DRG neurons in response to CPT or CFA stimulation is distinct from that of PKCε. Thus, in contrast to prevalent view, PKCα also plays an essential role in producing complex inflammation-induced receptor-mediated hyperalgesia. PMID:26963850

  5. Structural phase transition and phonon instabilities in Cu12Sb4S13

    DOE PAGESBeta

    May, Andrew F.; Delaire, Olivier A.; Niedziela, Jennifer L.; Lara-Curzio, Edgar; Susner, Michael A.; Abernathy, Douglas L.; Kirkham, Melanie J.; McGuire, Michael A.

    2016-02-08

    In this study, a structural phase transition has been discovered in the synthetic tetrahedrite Cu12Sb4S13 at approximately 88 K. Upon cooling, the material transforms from its known cubic symmetry to a tetragonal unit cell that is characterized by an in-plane ordering that leads to a doubling of the unit cell volume. Specific heat capacity measurements demonstrate a hysteresis of more than two degrees in the associated anomaly. A similar hysteresis was observed in powder x-ray diffraction measurements, which also indicate a coexistence of the two phases, and together these results suggest a first-order transition. This structural transition coincides with amore » recently-reported metal-insulator transition, and the structural instability is related to the very low thermal conductivity κ in these materials. Inelastic neutron scattering was used to measure the phonon density of states in Cu12Sb4S13 and Cu10Zn2Sb4S13, both of which possess a localized, low-energy phonon mode associated with strongly anharmonic copper displacements that suppress κ. In Cu12Sb4S13, signatures of the phase transition are observed in the temperature dependence of the localized mode, which disappears at the structural transition. In contrast, in the cubic Zn-doped material, the mode is at slightly higher-energy but observable for all temperatures, though it softens upon cooling.« less

  6. Structural phase transition and phonon instability in Cu12Sb4S13

    DOE PAGESBeta

    May, Andrew F.; Delaire, Olivier A.; Niedziela, Jennifer L.; Lara-Curzio, Edgar; Susner, Michael A.; Abernathy, Douglas L.; Kirkham, Melanie J.; McGuire, Michael A.

    2016-02-08

    In this study, a structural phase transition has been discovered in the synthetic tetrahedrite Cu12Sb4S13 at approximately 88 K. Upon cooling, the material transforms from its known cubic symmetry to a tetragonal unit cell that is characterized by an in-plane ordering that leads to a doubling of the unit cell volume. Specific heat capacity measurements demonstrate a hysteresis of more than two degrees in the associated anomaly. A similar hysteresis was observed in powder x-ray diffraction measurements, which also indicate a coexistence of the two phases, and together these results suggest a first-order transition. This structural transition coincides with amore » recently-reported metal-insulator transition, and the structural instability is related to the very low thermal conductivity κ in these materials. Inelastic neutron scattering was used to measure the phonon density of states in Cu12Sb4S13 and Cu10Zn2Sb4S13, both of which possess a localized, low-energy phonon mode associated with strongly anharmonic copper displacements that suppress κ. In Cu12Sb4S13, signatures of the phase transition are observed in the temperature dependence of the localized mode, which disappears at the structural transition. In contrast, in the cubic Zn-doped material, the mode is at slightly higher-energy but observable for all temperatures, though it softens upon cooling.« less

  7. Growth and Raman spectroscopic characterization of As 4S 4 (II) single crystals

    NASA Astrophysics Data System (ADS)

    Kyono, Atsushi

    2010-11-01

    As described by Kutoglu (1976 [16]), single crystals of As 4S 4 (II) phase have been grown using a new two-step synthesis that drastically increases the reproducibility that is attainable in synthetic experiments. First, through photo-induced phase transformation, pararealgar powder is prepared as a precursor instead of AsS melt. Then it is dissolved and recrystallized from CS 2 solvent. Results show that single crystals of the As 4S 4 (II) phase were obtained reproducibly through the dissolution-recrystallization process. Single crystals of As 4S 4 (II) obtained using this method were translucent and showed a uniform yellow-orange color. The crystal exhibits a platelet-like shape as a thin film with well-developed faces (0 1 0) and (0 1¯ 0). The grown crystals are as large as 0.50×0.50×0.01 mm. They were characterized using powder and single crystal X-ray diffraction techniques to confirm the phase identification and the lattice parameters. The As 4S 4 (II) phase crystallizes in monoclinic system with cell parameters a=11.202(4) Å, b=9.954(4) Å, c=7.142(4) Å, β=92.81(4)°, V=795.4(6) Å 3, which shows good agreement with the former value. Raman spectroscopic studies elucidated the behavior of the substance and the relation among phases of tetra-arsenic tetrasulfide.

  8. PHD Finger Recognition of Unmodified Histone H3R2 Links UHRF1 to Regulation of Euchromatic Gene Expression

    SciTech Connect

    E Rajakumara; Z Wang; H Ma; L Hu; H Chen; Y Lin; R Guo; F Wu; H Li; et al.

    2011-12-31

    Histone methylation occurs on both lysine and arginine residues, and its dynamic regulation plays a critical role in chromatin biology. Here we identify the UHRF1 PHD finger (PHD{sub UHRF1}), an important regulator of DNA CpG methylation, as a histone H3 unmodified arginine 2 (H3R2) recognition modality. This conclusion is based on binding studies and cocrystal structures of PHD{sub UHRF1} bound to histone H3 peptides, where the guanidinium group of unmodified R2 forms an extensive intermolecular hydrogen bond network, with methylation of H3R2, but not H3K4 or H3K9, disrupting complex formation. We have identified direct target genes of UHRF1 from microarray and ChIP studies. Importantly, we show that UHRF1's ability to repress its direct target gene expression is dependent on PHD{sub UHRF1} binding to unmodified H3R2, thereby demonstrating the functional importance of this recognition event and supporting the potential for crosstalk between histone arginine methylation and UHRF1 function.

  9. Modulation of behavior by the histaminergic system: lessons from HDC-, H3R- and H4R-deficient mice.

    PubMed

    Schneider, Erich H; Neumann, Detlef; Seifert, Roland

    2014-11-01

    Histamine, which is synthesized by histidine decarboxylase (HDC), does not only modulate the immune system, but is also acting as a neurotransmitter. Histaminergic neurons project from the tuberomamillary nucleus to numerous brain regions. Activation of presynaptic H3R inhibits the release of histamine and of non-histaminergic neurotransmitters. The phenotypes of Hdc(-/-)- and Hrh3(-/-) mice comprise behaviors related to locomotor activity, memory, cognition, anxiety, circadian rhythm, pain perception, food intake and addiction. We critically discuss these phenotypes that are probably caused by global changes of the histaminergic tone rather than by an altered stimulation of a single histamine receptor subtype. Constitutive H3R activity may add another layer of complexity by causing "histamine-independent histaminergic" processes, e.g. in Hdc(-/-) mice. We also discuss the clinical relevance of H3R- and HDC-deficient mice, e.g. the role of HDC in Tourette's syndrome. Finally, this review summarizes current knowledge on possible central H4R functions. Neuronal expression of H4R, however, is discussed controversially and a systematic behavioral characterization of Hrh4(-/-) mice is still missing. PMID:25102165

  10. PHD Finger Recognition of Unmodified Histone H3R2 Links UHRF1 to Regulation of Euchromatic Gene Expression

    SciTech Connect

    Rajakumara, Eerappa; Wang, Zhentian; Ma, Honghui; Hu, Lulu; Chen, Hao; Lin, Yan; Guo, Rui; Wu, Feizhen; Li, Haitao; Lan, Fei; Shi, Yujiang Geno; Xu, Yanhui; Patel, Dinshaw J.; Shi, Yang

    2011-08-29

    Histone methylation occurs on both lysine and arginine residues, and its dynamic regulation plays a critical role in chromatin biology. Here we identify the UHRF1 PHD finger (PHD{sub UHRF1}), an important regulator of DNA CpG methylation, as a histone H3 unmodified arginine 2 (H3R2) recognition modality. This conclusion is based on binding studies and cocrystal structures of PHD{sub UHRF1} bound to histone H3 peptides, where the guanidinium group of unmodified R2 forms an extensive intermolecular hydrogen bond network, with methylation of H3R2, but not H3K4 or H3K9, disrupting complex formation. We have identified direct target genes of UHRF1 from microarray and ChIP studies. Importantly, we show that UHRF1's ability to repress its direct target gene expression is dependent on PHD{sub UHRF1} binding to unmodified H3R2, thereby demonstrating the functional importance of this recognition event and supporting the potential for crosstalk between histone arginine methylation and UHRF1 function.

  11. Aluminum Tolerance Genes on the Short Arm of Chromosome 3R Are Linked to Organic Acid Release in Triticale1

    PubMed Central

    Ma, Jian Feng; Taketa, Shin; Yang, Zhen Ming

    2000-01-01

    Triticale, a hybrid between wheat and rye, shows a high degree of Al tolerance that is inherited from rye, but the mechanisms of high Al tolerance in both rye and triticale are unknown. We found that the short arm of chromosome 3R carries genes necessary for Al tolerance in triticale (× Triticosecale Wittmark cv Currency). Detailed comparative studies with a 3DS.3RL translocation line (ST22) and a non-substitution line (ST2) were conducted. Root elongation was similarly inhibited by Al in ST2 and ST22 during the first 12 h of Al treatment, but more strongly in ST22 than in ST2 at 18 h and thereafter. The root inhibition induced by other metals (Cu, Cd, and La) was similar between ST2 and ST22, suggesting that the action of the genes for Al tolerance on the short arm of triticale chromosome 3R is highly specific to Al. A 2-fold larger amount of malate and citrate was released from the roots of ST2 than from ST22 at 12 and 18 h after Al treatment, respectively. The marked lag phase in the inhibition of root elongation and the release of organic acids implies that the expression of genes on the short arm of triticale chromosome 3R is induced by Al, and that these genes are necessary for the release of organic acids. PMID:10712531

  12. A Membrane Reactor for H2S Decomposition

    SciTech Connect

    Edlund, D.

    1996-12-31

    This program consisted of experimental evaluation of new metal- membrane compositions, experimental evaluation of the corrosion resistance of structural alloys and coatings for use in fabricating membrane reactors, development and evaluation of new membrane reactor designs, and economic analysis of the membrane reactor-based process for H{sub 2}S thermolysis and membrane-reactor fabrication. The results are described. Preliminary economic analyses indicate that the membrane-reactor process will ultimately be a cost-effective, energy-efficient, and environmentally acceptable means for the separation and treatment of H{sub 2}S from hot coal-gasifier streams. We estimate that the proposed process will separate and decompose H{sub 2}S at a cost that is one-half to one-fifth that of conventional technology for this application-amine scrubbers coupled with the Claus process.

  13. Sensing properties of assembled Bi2S3 nanowire arrays

    NASA Astrophysics Data System (ADS)

    Kunakova, G.; Meija, R.; Bite, I.; Prikulis, J.; Kosmaca, J.; Varghese, J.; Holmes, J. D.; Erts, Donats

    2015-09-01

    Bismuth sulfide (Bi2S3) nanowires were grown in porous aluminium oxide template and a selective chemical etching was applied to transfer the nanowires to a solution. Well aligned nanowire arrays were assembled on pre-patterned silicon substrates employing dielectrophoresis. Electron beam lithography was used to connect aligned individual nanowires to the common macroelectrode. In order to evaluate the conductometric sensing performance of the Bi2S3 nanowires, current-voltage characteristics were measured at different relative humidity (RH) levels (5-80%) / argon medium. The response of the Bi2S3 nanowires depending of RH is found to be considerably different from those reported for other types of nanowire RH sensor devices.

  14. Theoretical transition probabilities between the lowest 2S, 2P and 2D states of Na, K, Rb and Cs

    NASA Technical Reports Server (NTRS)

    Langhoff, S. R.; Bauschlicher, C. W., Jr.; Partridge, H.

    1985-01-01

    Theoretical transition probabilities between the lowest 2S, 2P and 2D states of the alkali atoms Na through Cs have been computed using near Hartree-Fock quality Slater basis sets. The important core-valence correlation effects are incorporated explicitly by a configuration-interaction procedure. For Cs, the calculations were repeated using a Gaussian basis set so that relativistic effects could be incorporated through an effective core potential procedure. The best calculated electric quadrupole Einstein coefficients are Na(196.3/s), K(103.6/s), Rb(72.4/s) and Cs(19.7/s). Core-valence effects become increasingly important down the column, and reduce the quadrupole transition strengths to about the same degree as for the 2P-2S and 2D-2P dipole-allowed transitions. Relativistic effects increase the quadrupole moment of Cs, but less so than in Ba, presumably because the alkali 2D states are more diffuse.

  15. Radiative lifetimes of the 2s2p2(4P) metastable levels of N III

    NASA Technical Reports Server (NTRS)

    Fang, Z.; Kwong, Victor H. S.; Parkinson, W. H.

    1993-01-01

    The radiative decay rates of N III 175 nm intersystem lines were measured in the laboratory by recording the time dependence of photon intensities emitted as the 2s2p2(4P) metastable term of N(2+) ions decay to the 2s22p(2P0) ground term. A cylindrical radio frequency ion trap was used to store the electron impact-produced N(2+) ions. The radiative decay signals were analyzed by multiexponential least-squares fits to the data. The measured radiative decay rates to the ground term are 1019(+/- 64)/s for 4P sub 1/2, 74.5(+/- 5.4)/s for 4P sub 3/2, and 308( +/- 22)/s for 4P sub 5/2. Comparisons of the measured values with theoretical values are presented.

  16. Atomic structure of the DNA repair [4Fe-4S] enzyme endonuclease III.

    PubMed

    Kuo, C F; McRee, D E; Fisher, C L; O'Handley, S F; Cunningham, R P; Tainer, J A

    1992-10-16

    The crystal structure of the DNA repair enzyme endonuclease III, which recognizes and cleaves DNA at damaged bases, has been solved to 2.0 angstrom resolution with an R factor of 0.185. This iron-sulfur [4Fe-4S] enzyme is elongated and bilobal with a deep cleft separating two similarly sized domains: a novel, sequence-continuous, six-helix domain (residues 22 to 132) and a Greek-key, four-helix domain formed by the amino-terminal and three carboxyl-terminal helices (residues 1 to 21 and 133 to 211) together with the [4Fe-4S] cluster. The cluster is bound entirely within the carboxyl-terminal loop with a ligation pattern (Cys-X6-Cys-X2-Cys-X5-Cys) distinct from all other known [4Fe-4S] proteins. Sequence conservation and the positive electrostatic potential of conserved regions identify a surface suitable for binding duplex B-DNA across the long axis of the enzyme, matching a 46 angstrom length of protected DNA. The primary role of the [4Fe-4S] cluster appears to involve positioning conserved basic residues for interaction with the DNA phosphate backbone. The crystallographically identified inhibitor binding region, which recognizes the damaged base thymine glycol, is a seven-residue beta-hairpin (residues 113 to 119). Location and side chain orientation at the base of the inhibitor binding site implicate Glu112 in the N-glycosylase mechanism and Lys120 in the beta-elimination mechanism. Overall, the structure reveals an unusual fold and a new biological function for [4Fe-4S] clusters and provides a structural basis for studying recognition of damaged DNA and the N-glycosylase and apurinic/apyrimidinic-lyase mechanisms. PMID:1411536

  17. Human inositol 1,4,5-trisphosphate type-1 receptor, InsP3R1: structure, function, regulation of expression and chromosomal localization.

    PubMed Central

    Yamada, N; Makino, Y; Clark, R A; Pearson, D W; Mattei, M G; Guénet, J L; Ohama, E; Fujino, I; Miyawaki, A; Furuichi, T

    1994-01-01

    We have isolated cDNA clones encoding an inositol 1,4,5-trisphosphate receptor type 1 (InsP3R1) from human uteri and a leukaemic cell line, HL-60. Northern-blot analysis showed that approx. 10 kb of InsP3R1 mRNA is expressed in human uteri, oviducts and HL-60 cells. The predicted amino acid sequence of human InsP3R1 (2695 amino acids) has 99% identity with that of the mouse SI-/SII- splicing counterpart. Western-blot analysis with anti-(mouse InsP3R1) antibodies showed that InsP3R1 protein of human uteri and oviducts of approx 220 kDa is immunostained. Northern-blot analysis of HL-60 cell differentiation along the neutrophilic lineage induced by retinoic acid or dimethylsulphoxide showed an accompanying enhanced expression of InsP3R1 mRNA. Immunohistochemical analysis of the cerebella of spinocerebellar degeneration patients showed a variable loss of Purkinje cells with an altered pattern of immunostaining. The InsP3R1 gene (Insp3r1) was localized to the 3P25-26 region of human chromosome 3. The data presented here clearly show that InsP3R1 exists widely in human tissues and may play critical roles in various kinds of cellular functions. Images Figure 2 Figure 3 Figure 5 Figure 6 Figure 7 Figure 8 PMID:7945203

  18. Faraday effect in Sn2P2S6 crystals.

    PubMed

    Krupych, Oleh; Adamenko, Dmytro; Mys, Oksana; Grabar, Aleksandr; Vlokh, Rostyslav

    2008-11-10

    We have revealed a large Faraday rotation in tin thiohypodiphosphate (Sn(2)P(2)S(6)) crystals, which makes this material promising for magneto-optics. The effective Faraday tensor component and the Verdet constant for the direction of the optic axis have been determined by measuring the pure Faraday rotation in Sn(2)P(2)S(6) crystals with both the single-ray and small-angular polarimetric methods at the normal conditions and a wavelength of 632.8 nm. The effective Verdet constant is found to be equal to 115 rad/T x m. PMID:19002228

  19. Photocatalytic Au-Bi2S3 heteronanostructures.

    PubMed

    Manna, Goutam; Bose, Riya; Pradhan, Narayan

    2014-06-23

    Au-Bi2S3 heteronanostructure photocatalysts were designed in which the coupling of a metal plasmon and a semiconductor exciton aids the absorption of solar light, enhances charge separation, and results in improved catalytic activity. Furthermore, these nanostructures show a unique pattern of structural combination, with Au nanoparticles positioned at the center of Bi2S3 nanorods. The chemistry of formation of these nanostructures, their epitaxy at the junction, and their photoconductance were studied, as well as their photoresponse properties. PMID:24844409

  20. Assay Methods for H2S Biogenesis and Catabolism Enzymes

    PubMed Central

    Banerjee, Ruma; Chiku, Taurai; Kabil, Omer; Libiad, Marouane; Motl, Nicole; Yadav, Pramod K.

    2015-01-01

    H2S is produced from sulfur-containing amino acids, cysteine and homocysteine, or a catabolite, 3-mercaptopyruvate, by three known enzymes: cystathionine β-synthase, γ-cystathionase, and 3-mercaptopyruvate sulfurtransferase. Of these, the first two enzymes reside in the cytoplasm and comprise the transsulfuration pathway, while the third enzyme is found both in the cytoplasm and in the mitochondrion. The following mitochondrial enzymes oxidize H2S: sulfide quinone oxidoreductase, sulfur dioxygenase, rhodanese, and sulfite oxidase. The products of the sulfide oxidation pathway are thiosulfate and sulfate. Assays for enzymes involved in the production and oxidative clearance of sulfide to thiosulfate are described in this chapter. PMID:25725523

  1. Assay methods for H2S biogenesis and catabolism enzymes.

    PubMed

    Banerjee, Ruma; Chiku, Taurai; Kabil, Omer; Libiad, Marouane; Motl, Nicole; Yadav, Pramod K

    2015-01-01

    H2S is produced from sulfur-containing amino acids, cysteine and homocysteine, or a catabolite, 3-mercaptopyruvate, by three known enzymes: cystathionine β-synthase, γ-cystathionase, and 3-mercaptopyruvate sulfurtransferase. Of these, the first two enzymes reside in the cytoplasm and comprise the transsulfuration pathway, while the third enzyme is found both in the cytoplasm and in the mitochondrion. The following mitochondrial enzymes oxidize H2S: sulfide quinone oxidoreductase, sulfur dioxygenase, rhodanese, and sulfite oxidase. The products of the sulfide oxidation pathway are thiosulfate and sulfate. Assays for enzymes involved in the production and oxidative clearance of sulfide to thiosulfate are described in this chapter. PMID:25725523

  2. The distribution and clearance of (2S,6S)-hydroxynorketamine, an active ketamine metabolite, in Wistar rats

    PubMed Central

    Moaddel, Ruin; Sanghvi, Mitesh; Dossou, Katina Sourou Sylvestre; Ramamoorthy, Anuradha; Green, Carol; Bupp, James; Swezey, Robert; O’Loughlin, Kathleen; Wainer, Irving W

    2015-01-01

    The distribution, clearance, and bioavailability of (2S,6S)-hydroxynorketamine has been studied in the Wistar rat. The plasma and brain tissue concentrations over time of (2S,6S)-hydroxynorketamine were determined after intravenous (20 mg/kg) and oral (20 mg/kg) administration of (2S,6S)-hydroxynorketamine (n = 3). After intravenous administration, the pharmacokinetic parameters were estimated using noncompartmental analysis and the half-life of drug elimination during the terminal phase (t1/2) was 8.0 ± 4.0 h and the apparent volume of distribution (Vd) was 7352 ± 736 mL/kg, clearance (Cl) was 704 ± 139 mL/h per kg, and the bioavailability was 46.3%. Significant concentrations of (2S,6S)-hydroxynorketamine were measured in brain tissues at 10 min after intravenous administration, ∼30 μg/mL per g tissue which decreased to 6 μg/mL per g tissue at 60 min. The plasma and brain concentrations of (2S,6S)-hydroxynorketamine were also determined after the intravenous administration of (S)-ketamine, where significant plasma and brain tissue concentrations of (2S,6S)-hydroxynorketamine were observed 10 min after administration. The (S)-ketamine metabolites (S)-norketamine, (S)-dehydronorketamine, (2S,6R)-hydroxynorketamine, (2S,5S)-hydroxynorketamine and (2S,4S)-hydroxynorketamine were also detected in both plasma and brain tissue. The enantioselectivity of the conversion of (S)-ketamine and (R)-ketamine to the respective (2,6)-hydroxynorketamine metabolites was also investigated over the first 60 min after intravenous administration. (S)-Ketamine produced significantly greater plasma and brain tissue concentrations of (2S,6S)-hydroxynorketamine relative to the (2R,6R)-hydroxynorketamine observed after the administration of (R)-ketamine. However, the relative brain tissue: plasma concentrations of the enantiomeric (2,6)-hydroxynorketamine metabolites were not significantly different indicating that the penetration of the metabolite is not

  3. Adsorption of insoluble polysulfides Li2S(x) (x = 1, 2) on Li2S surfaces.

    PubMed

    Liu, Zhixiao; Hubble, Dion; Balbuena, Perla B; Mukherjee, Partha P

    2015-04-14

    In lithium-sulfur batteries, the growth of insulating discharge product Li2S film affects the cathode microstructure and the related electron as well as lithium ion transport properties. In this study, chemical reactions of insoluble lithium polysulfides Li2Sx (x = 1, 2) on crystal Li2S substrate are investigated by a first-principles approach. First-principles atomistic thermodynamics predicts that the stoichiometric (111) and (110) surfaces are stable around the operating cell voltage. Li2Sx adsorption is an exothermic reaction with the (110) surface being more active to react with the polysulfides than the stoichiometric (111) surface. There is no obvious charge transfer between the adsorbed molecule and the crystal Li2S substrate. Analysis of the charge density difference suggests that the adsorbate interacts with the substrate via a strong covalent bond. The growth mechanism of thermodynamically stable surfaces is investigated in the present study. It is found that direct Li2S deposition is energetically favored over Li2S2 deposition and reduction process. PMID:25752296

  4. Inhibition of β-catenin signaling involved in the biological activities of a lignan E2S isolated from Carya cathayensis fruits.

    PubMed

    Xia, Xichun; Bi, Xiuli; Wu, Wei; Mou, Yanhua; Hou, Yue; Zhang, Kaiqing; Zhao, Yuqing

    2013-11-01

    Carya cathayensis is a fruit-bearing plant that belongs to the Juglandaceae family and is widely distributed throughout the world. It possesses various important biological activities. We have previously isolated an antitumor compound from the shell of C. cathayensis fruits and named it E2S ((E)-3-[(2S,3R)-2,3-dihydro-2-(4'-hydroxy-3'-methoxyphenyl)-3-hydroxymethyl-7-methoxy-1-benzo[b]furan-5-yl]-2-propenal). In this study, we investigated the antitumor activity of E2S against various human colorectal cancer cell lines (HCT116, HT29, SW480, LoVo). The results showed that E2S could significantly inhibit the growth of cancer cells in a dose-dependent manner, as well as disrupt the progression of the cell cycle. Mechanistic study revealed that E2S could decrease the protein levels of β-catenin and its downstream targets (such as c-myc, a key transcriptional target of β-catenin) in the cells. In addition, it also significantly suppressed β-catenin/TCF transcriptional activity. Taken together, the results suggested that E2S might partially exert an antiproliferative effect on human colorectal cancer cells by targeting β-catenin signaling, a finding that might potentially translate into a chemotherapeutic strategy for the treatment of cancer. It might also have implications for cancer prevention strategies. PMID:24218372

  5. Hydrazine solution processed Sb2S3, Sb2Se3 and Sb2(S(1-x)Se(x))3 film: molecular precursor identification, film fabrication and band gap tuning.

    PubMed

    Yang, Bo; Xue, Ding-Jiang; Leng, Meiying; Zhong, Jie; Wang, Liang; Song, Huaibing; Zhou, Ying; Tang, Jiang

    2015-01-01

    Sb2(S(1-x)Se(x))3 (0 ≤ x ≤ 1) compounds have been proposed as promising light-absorbing materials for photovoltaic device applications. However, no systematic study on the synthesis and characterization of polycrystalline Sb2(S(1-x)Se(x))3 thin films has been reported. Here, using a hydrazine based solution process, single-phase Sb2(S(1-x)Se(x))3 films were successfully obtained. Through Raman spectroscopy, we have investigated the dissolution mechanism of Sb in hydrazine: 1) the reaction between Sb and S/Se yields [Sb4S7](2-)/[Sb4Se7](2-) ions within their respective solutions; 2) in the Sb-S-Se precursor solutions, Sb, S, and Se were mixed on a molecular level, facilitating the formation of highly uniform polycrystalline Sb2(S(1-x)Se(x))3 thin films at a relatively low temperature. UV-vis-NIR transmission spectroscopy revealed that the band gap of Sb2(S(1-x)Se(x))3 alloy films had a quadratical relationship with the Se concentration x and it followed the equation Eg(x) = 0.118x(2) - 0.662x + 1.621eV, where the bowing parameter was 0.118 eV. Our study provides a valuable guidance for the adjustment and optimization of the band gap in hydrazine solution processed Sb2(S(1-x)Se(x))3 alloy films for the future fabrication of improved photovoltaic devices. PMID:26042519

  6. REACTION OF H2S AND SULFUR WITH LIMESTONE PARTICLES

    EPA Science Inventory

    The paper gives results of a study of the direct-displacement reaction of limestone with hydrogen sulfide (H2S) over the temperature range 570-850 C in a differential reactor. It is one of several possible mechanisms of sulfur capture in limestone-injection multistage burners whi...

  7. Controlling H/sub 2/S in fuel oils

    SciTech Connect

    Roof, G.L.

    1989-09-19

    This patent describes the method of maintaining the H/sub 2/S content of the atmosphere above heavy sour fuel oils within acceptable limits. It comprises treating such fuel oils with an effective amount of choline base at a temperature below the decomposition temperature of choline base.

  8. The PI2S2 project: grid and new challenges .

    NASA Astrophysics Data System (ADS)

    Becciani, U.

    The new grid e-Infrastructure in Sicily is offering new perspectives and important resources for both scientific and industrial application in the National context. This paper shows the infrastructure of the Cometa Consortium built with the PI2S2 project, the current status of the project and the new challenges, mainly in the HPC area, that the project is carrying out.

  9. H2S during circulatory shock: some unresolved questions.

    PubMed

    McCook, Oscar; Radermacher, Peter; Volani, Chiara; Asfar, Pierre; Ignatius, Anita; Kemmler, Julia; Möller, Peter; Szabó, Csaba; Whiteman, Matthew; Wood, Mark E; Wang, Rui; Georgieff, Michael; Wachter, Ulrich

    2014-09-15

    Numerous papers have been published on the role of H2S during circulatory shock. Consequently, knowledge about vascular sulfide concentrations may assume major importance, in particular in the context of "acute on chronic disease", i.e., during circulatory shock in animals with pre-existing chronic disease. This review addresses the questions (i) of the "real" sulfide levels during circulatory shock, and (ii) to which extent injury and pre-existing co-morbidity may affect the expression of H2S producing enzymes under these conditions. In the literature there is a huge range on sulfide blood levels during circulatory shock, in part as a result of the different analytical methods used, but also due to the variable of the models and species studied. Clearly, some of the very high levels reported should be questioned in the context of the well-known H2S toxicity. As long as "real" sulfide levels during circulatory shock are unknown and/or undetectable "on line" due to the lack of appropriate techniques, it appears to be premature to correlate the measured blood levels of hydrogen sulfide with the severity of shock or the H2S therapy-related biological outcomes. The available data on the tissue expression of the H2S-releasing enzymes during circulatory shock suggest that a "constitutive" CSE expression may play a crucial role of for the maintenance of organ function, at least in the kidney. The data also indicate that increased CBS and CSE expression, in particular in the lung and the liver, represents an adaptive response to stress states. PMID:24650697

  10. H2S during circulatory shock: Some unresolved questions

    PubMed Central

    McCook, Oscar; Radermacher, Peter; Volani, Chiara; Asfar, Pierre; Ignatius, Anita; Kemmler, Julia; Möller, Peter; Szabó, Csaba; Whiteman, Matthew; Wood, Mark E.; Wang, Rui; Georgieff, Michael; Wachter, Ulrich

    2014-01-01

    Numerous papers have been published on the role of H2S during circulatory shock. Consequently, knowledge about vascular sulfide concentrations may assume major importance, in particular in the context of “acute on chronic disease”, i.e., during circulatory shock in animals with pre-existing chronic disease. This review addresses the questions i) of the “real” sulfide levels during circulatory shock, and, ii) to which extent injury and pre-existing co-morbidity may affect the expression of H2S producing enzymes under these conditions. In the literature there is a huge range on sulfide blood levels during circulatory shock, in part as a result of the different analytical methods used, but also due to the variable of the models and species studied. Clearly, some of the very high levels reported should be questioned in the context of the well-known H2S toxicity. As long as “real” sulfide levels during circulatory shock are unknown and/or undetectable “on line” due to the lack of appropriate techniques, it appears to be premature to correlate the measured blood levels of hydrogen sulfide with the severity of shock or the H2S therapy-related biological outcomes. The available data on the tissue expression of the H2S-releasing enzymes during circulatory shock suggest that a “constitutive” CSE expression may play a crucial role of for the maintenance of organ function, at least in the kidney. The data also indicate that increased CBS and CSE expression, in particular in the lung and the liver, represents an adaptive response to stress states. PMID:24650697

  11. Stability studies of As4S4 nanosuspension prepared by wet milling in Poloxamer 407.

    PubMed

    Bujňáková, Zdenka; Dutková, Erika; Baláž, Matej; Turianicová, Erika; Baláž, Peter

    2015-01-15

    In this paper the stability of the arsenic sulfide (As4S4) nanosuspension prepared by wet milling in a circulation mill in the environment of copolymer Poloxamer 407 was studied. The obtained As4S4 particles in nanosuspension were of ∼ 100 nm in size. The influence of temperature and UV irradiation on the changes in physical and/or chemical properties was followed. Long-term stability was observed via particle size distribution and zeta potential measurements. Influence of UV irradiation was studied via UV-vis spectroscopy (UV-vis), photoluminicsence (PL) technique and Fourier transform infrared spectroscopy (FTIR) measurements. The best stability of the nanosuspension (24 weeks) was achieved when stored at 4°C and in the dark. PMID:25448581

  12. Absolute state-selected total cross sections for the O(+)(4S) + CO2 reactions

    NASA Astrophysics Data System (ADS)

    Flesch, G. D.; Ng, C. Y.

    1991-12-01

    Results are presented on measurements of absolute state-selected total cross sections for O2(+), CO2(+), CO(+), and C(+) produced in the reaction between O(+)(4S) and CO2, which were conducted in the center-of-mass collision energy (Ecm) range of 0.2-150 eV. It was found that, with increasing collisional energy, the cross section of O2(+) dropped off rapidly and became essentially zero at Ecm above 3 eV. The dependence of O2(+) cross section on the Ecm is consistent with a collision complex mechanism for the reaction between O(+)(4S) and CO2 yielding CO2(+) + O. The values for O2(+) obtained in this experiment were significantly higher than those reported by Rutherford and Vroom (1976).

  13. Measurement of the branching fraction of Gamma(4S) --> B0B0.

    PubMed

    Aubert, B; Barate, R; Boutigny, D; Couderc, F; Karyotakis, Y; Lees, J P; Poireau, V; Tisserand, V; Zghiche, A; Grauges-Pous, E; Palano, A; Pappagallo, M; Pompili, A; Chen, J C; Qi, N D; Rong, G; Wang, P; Zhu, Y S; Eigen, G; Ofte, I; Stugu, B; Abrams, G S; Borgland, A W; Breon, A B; Brown, D N; Button-Shafer, J; Cahn, R N; Charles, E; Day, C T; Gill, M S; Gritsan, A V; Groysman, Y; Jacobsen, R G; Kadel, R W; Kadyk, J; Kerth, L T; Kolomensky, Yu G; Kukartsev, G; Lynch, G; Mir, L M; Oddone, P J; Orimoto, T J; Pripstein, M; Roe, N A; Ronan, M T; Wenzel, W A; Barrett, M; Ford, K E; Harrison, T J; Hart, A J; Hawkes, C M; Morgan, S E; Watson, A T; Fritsch, M; Goetzen, K; Held, T; Koch, H; Lewandowski, B; Pelizaeus, M; Peters, K; Schroeder, T; Steinke, M; Boyd, J T; Burke, J P; Chevalier, N; Cottingham, W N; Kelly, M P; Cuhadar-Donszelmann, T; Hearty, C; Knecht, N S; Mattison, T S; McKenna, J A; Thiessen, D; Khan, A; Kyberd, P; Teodorescu, L; Blinov, A E; Blinov, V E; Bukin, A D; Druzhinin, V P; Golubev, V B; Ivanchenko, V N; Kravchenko, E A; Onuchin, A P; Serednyakov, S I; Skovpen, Yu I; Solodov, E P; Yushkov, A N; Best, D; Bondioli, M; Bruinsma, M; Chao, M; Eschrich, I; Kirkby, D; Lankford, A J; Mandelkern, M; Mommsen, R K; Roethel, W; Stoker, D P; Buchanan, C; Hartfiel, B L; Weinstein, A J R; Foulkes, S D; Gary, J W; Long, O; Shen, B C; Wang, K; Zhang, L; Del Re, D; Hadavand, H K; Hill, E J; MacFarlane, D B; Paar, H P; Rahatlou, Sh; Sharma, V; Berryhill, J W; Campagnari, C; Cunha, A; Dahmes, B; Hong, T M; Lu, A; Mazur, M A; Richman, J D; Verkerke, W; Beck, T W; Eisner, A M; Flacco, C J; Heusch, C A; Kroseberg, J; Lockman, W S; Nesom, G; Schalk, T; Schumm, B A; Seiden, A; Spradlin, P; Williams, D C; Wilson, M G; Albert, J; Chen, E; Dubois-Felsmann, G P; Dvoretskii, A; Hitlin, D G; Narsky, I; Piatenko, T; Porter, F C; Ryd, A; Samuel, A; Yang, S; Jayatilleke, S; Mancinelli, G; Meadows, B T; Sokoloff, M D; Blanc, F; Bloom, P; Chen, S; Ford, W T; Nauenberg, U; Olivas, A; Rankin, P; Ruddick, W O; Smith, J G; Ulmer, K A; Zhang, J; Chen, A; Eckhart, E A; Harton, J L; Soffer, A; Toki, W H; Wilson, R J; Zeng, Q; Spaan, B; Altenburg, D; Brandt, T; Brose, J; Dickopp, M; Feltresi, E; Hauke, A; Lacker, H M; Maly, E; Nogowski, R; Otto, S; Petzold, A; Schott, G; Schubert, J; Schubert, K R; Schwierz, R; Sundermann, J E; Bernard, D; Bonneaud, G R; Grenier, P; Schrenk, S; Thiebaux, Ch; Vasileiadis, G; Verderi, M; Bard, D J; Clark, P J; Gradl, W; Muheim, F; Playfer, S; Xie, Y; Andreotti, M; Azzolini, V; Bettoni, D; Bozzi, C; Calabrese, R; Cibinetto, G; Luppi, E; Negrini, M; Piemontese, L; Sarti, A; Anulli, F; Baldini-Ferroli, R; Calcaterra, A; de Sangro, R; Finocchiaro, G; Patteri, P; Peruzzi, I M; Piccolo, M; Zallo, A; Buzzo, A; Capra, R; Contri, R; Lo Vetere, M; Macri, M; Monge, M R; Passaggio, S; Patrignani, C; Robutti, E; Santroni, A; Tosi, S; Bailey, S; Brandenburg, G; Chaisanguanthum, K S; Morii, M; Won, E; Dubitzky, R S; Langenegger, U; Marks, J; Uwer, U; Bhimji, W; Bowerman, D A; Dauncey, P D; Egede, U; Gaillard, J R; Morton, G W; Nash, J A; Nikolich, M B; Taylor, G P; Charles, M J; Grenier, G J; Mallik, U; Cochran, J; Crawley, H B; Meyer, W T; Prell, S; Rosenberg, E I; Rubin, A E; Yi, J; Arnaud, N; Davier, M; Giroux, X; Grosdidier, G; Höcker, A; Le Diberder, F; Lepeltier, V; Lutz, A M; Petersen, T C; Pierini, M; Plaszczynski, S; Rodier, S; Roudeau, P; Schune, M H; Stocchi, A; Wormser, G; Cheng, C H; Lange, D J; Simani, M C; Wright, D M; Bevan, A J; Chavez, C A; Coleman, J P; Forster, I J; Fry, J R; Gabathuler, E; Gamet, R; George, K A; Hutchcroft, D E; Parry, R J; Payne, D J; Touramanis, C; Cormack, C M; Di Lodovico, F; Brown, C L; Cowan, G; Flack, R L; Flaecher, H U; Green, M G; Jackson, P S; McMahon, T R; Ricciardi, S; Salvatore, F; Winter, M A; Brown, D; Davis, C L; Allison, J; Barlow, N R; Barlow, R J; Hodgkinson, M C; Lafferty, G D; Naisbit, M T; Williams, J C; Chen, C; Farbin, A; Hulsbergen, W D; Jawahery, A; Kovalskyi, D; Lae, C K; Lillard, V; Roberts, D A; Blaylock, G; Dallapiccola, C; Hertzbach, S S; Kofler, R; Koptchev, V B; Moore, T B; Saremi, S; Staengle, H; Willocq, S; Cowan, R; Koeneke, K; Sciolla, G; Sekula, S J; Taylor, F; Yamamoto, R K; Patel, P M; Robertson, S H; Lazzaro, A; Lombardo, V; Palombo, F; Bauer, J M; Cremaldi, L; Eschenburg, V; Godang, R; Kroeger, R; Reidy, J; Sanders, D A; Summers, D J; Zhao, H W; Brunet, S; Côté, D; Taras, P; Nicholson, H; Cavallo, N; De Nardo, G; Fabozzi, F; Gatto, C; Lista, L; Monorchio, D; Paolucci, P; Piccolo, D; Sciacca, C; Baak, M; Bulten, H; Raven, G; Snoek, H L; Wilden, L; Jessop, C P; Losecco, J M; Allmendinger, T; Benelli, G; Gan, K K; Honscheid, K; Hufnagel, D; Kagan, H; Kass, R; Pulliam, T; Rahimi, A M; Ter-Antonyan, R; Wong, Q K; Brau, J; Frey, R; Igonkina, O; Lu, M; Potter, C T; Sinev, N B; Strom, D; Torrence, E; Colecchia, F; Dorigo, A; Galeazzi, F; Margoni, M; Morandin, M; Posocco, M; Rotondo, M; Simonetto, F; Stroili, R; Voci, C; Benayoun, M; Briand, H; Chauveau, J; David, P; Del Buono, L; de la Vaissière, Ch; Hamon, O; John, M J J; Leruste, Ph; Malclès, J; Ocariz, J; Roos, L; Therin, G; Behera, P K; Gladney, L; Guo, Q H; Panetta, J; Biasini, M; Covarelli, R; Pioppi, M; Angelini, C; Batignani, G; Bettarini, S; Bucci, F; Calderini, G; Carpinelli, M; Forti, F; Giorgi, M A; Lusiani, A; Marchiori, G; Morganti, M; Neri, N; Paoloni, E; Rama, M; Rizzo, G; Simi, G; Walsh, J; Haire, M; Judd, D; Paick, K; Wagoner, D E; Danielson, N; Elmer, P; Lau, Y P; Lu, C; Olsen, J; Smith, A J S; Telnov, A V; Bellini, F; Cavoto, G; D'Orazio, A; Di Marco, E; Faccini, R; Ferrarotto, F; Ferroni, F; Gaspero, M; Li Gioi, L; Mazzoni, M A; Morganti, S; Piredda, G; Polci, F; Tehrani, F Safai; Voena, C; Christ, S; Schröder, H; Wagner, G; Waldi, R; Adye, T; De Groot, N; Franek, B; Gopal, G P; Olaiya, E O; Wilson, F F; Aleksan, R; Emery, S; Gaidot, A; Ganzhur, S F; Giraud, P-F; Graziani, G; de Monchenault, G Hamel; Kozanecki, W; Legendre, M; London, G W; Mayer, B; Vasseur, G; Yèche, Ch; Zito, M; Purohit, M V; Weidemann, A W; Wilson, J R; Yumiceva, F X; Abe, T; Allen, M; Aston, D; Bartoldus, R; Berger, N; Boyarski, A M; Buchmueller, O L; Claus, R; Convery, M R; Cristinziani, M; Dingfelder, J C; Dong, D; Dorfan, J; Dujmic, D; Dunwoodie, W; Fan, S; Field, R C; Glanzman, T; Gowdy, S J; Hadig, T; Halyo, V; Hast, C; Hryn'ova, T; Innes, W R; Kelsey, M H; Kim, P; Kocian, M L; Leith, D W G S; Libby, J; Luitz, S; Luth, V; Lynch, H L; Marsiske, H; Messner, R; Mohapatra, A K; Muller, D R; O'Grady, C P; Ozcan, V E; Perazzo, A; Perl, M; Ratcliff, B N; Roodman, A; Salnikov, A A; Schindler, R H; Schwiening, J; Snyder, A; Soha, A; Stelzer, J; Strube, J; Su, D; Sullivan, M K; Thompson, J; Va'vra, J; Wagner, S R; Weaver, M; Wisniewski, W J; Wittgen, M; Wright, D H; Yarritu, A K; Young, C C; Burchat, P R; Edwards, A J; Majewski, S A; Petersen, B A; Roat, C; Ahmed, M; Ahmed, S; Alam, M S; Ernst, J A; Saeed, M A; Saleem, M; Wappler, F R; Bugg, W; Krishnamurthy, M; Spanier, S M; Eckmann, R; Kim, H; Ritchie, J L; Satpathy, A; Schwitters, R F; Izen, J M; Kitayama, I; Lou, X C; Ye, S; Bianchi, F; Bona, M; Gallo, F; Gamba, D; Bomben, M; Bosisio, L; Cartaro, C; Cossutti, F; Ricca, G Della; Dittongo, S; Grancagnolo, S; Lanceri, L; Poropat, P; Vitale, L; Vuagnin, G; Martinez-Vidal, F; Panvini, R S; Banerjee, Sw; Bhuyan, B; Brown, C M; Fortin, D; Hamano, K; Jackson, P D; Kowalewski, R; Roney, J M; Sobie, R J; Back, J J; Harrison, P F; Latham, T E; Mohanty, G B; Band, H R; Chen, X; Cheng, B; Dasu, S; Datta, M; Eichenbaum, A M; Flood, K T; Graham, M; Hollar, J J; Johnson, J R; Kutter, P E; Li, H; Liu, R; Mellado, B; Mihalyi, A; Pan, Y; Prepost, R; Tan, P; von Wimmersperg-Toeller, J H; Wu, J; Wu, S L; Yu, Z; Greene, M G; Neal, H

    2005-07-22

    We report the first measurement of the branching fraction f(00) for Gamma(4S) --> B(0)B(0). The data sample consists of 81.7 fb(-1) collected at the Gamma(4S) resonance with the BABAR detector at the SLAC PEP-II asymmetric-energy e(+)e(-) storage ring. Using partial reconstruction of the decay B(0) --> D(*+) l(-)nu(l) in which only the charged lepton and the soft pion from the decay D(*+) --> D(0)pi(+) are reconstructed, we obtain f(00) = 0.487 +/- 0.010(stat) +/- 0.008(syst). Our result does not depend on the branching fractions of B(0) --> D(*+)l(-)nu(l) and D(*+) --> D(0)pi(+) decays, on the ratio of the charged and neutral B meson lifetimes, nor on the assumption of isospin symmetry. PMID:16090800

  14. Structure of the non-redox-active tungsten/[4Fe:4S] enzyme acetylene hydratase.

    PubMed

    Seiffert, Grazyna B; Ullmann, G Matthias; Messerschmidt, Albrecht; Schink, Bernhard; Kroneck, Peter M H; Einsle, Oliver

    2007-02-27

    The tungsten-iron-sulfur enzyme acetylene hydratase stands out from its class because it catalyzes a nonredox reaction, the hydration of acetylene to acetaldehyde. Sequence comparisons group the protein into the dimethyl sulfoxide reductase family, and it contains a bis-molybdopterin guanine dinucleotide-ligated tungsten atom and a cubane-type [4Fe:4S] cluster. The crystal structure of acetylene hydratase at 1.26 A now shows that the tungsten center binds a water molecule that is activated by an adjacent aspartate residue, enabling it to attack acetylene bound in a distinct, hydrophobic pocket. This mechanism requires a strong shift of pK(a) of the aspartate, caused by a nearby low-potential [4Fe:4S] cluster. To access this previously unrecognized W-Asp active site, the protein evolved a new substrate channel distant from where it is found in other molybdenum and tungsten enzymes. PMID:17360611

  15. Exchange variation of zero-field splittings in [Fe 4S 4] + clusters of ferredoxins with high-spin S=3/2 ground state

    NASA Astrophysics Data System (ADS)

    Belinsky, Moisey I.

    2000-04-01

    The spin-coupling model of zero-field splitting (ZFS) of tetrameric mixed-valent and monovalent clusters is developed. The <| ŝi0(2)|> matrix elements of the individual ZFS tensor operator of the second rank were calculated for tetramers of the general type in the representation of the total and intermediate spins. The spin-dependent correlations between ZFS parameters D S of the cluster states S and D i of individual ions s i were obtained for [4Fe-4S] + centers of native systems and synthetic model compounds with the high-spin Sgr=3/2 ground state. It was shown that the single-particle spin parameters f i=<| ŝiz2-s i(s i+1)/3|>/<| Ŝz2-S(S+1)/3|> of the [Fe 3(II)Fe(III)] center essentially depend on the total, intermediate and local spins and on the exchange parameters. In the spin schemes with fixed intermediate spins, the correlation between the cluster total spin ZFS parameters, D S, and the individual ZFS parameters, D i, are determined by the total, intermediate and individual spins. Anisotropic cluster ZFS parameters D S strongly depend on isotropic Heisenberg exchange and double exchange inter-ion interactions due to exchange mixing of the states with different intermediate spins. It was shown that the cluster ZFS parameters D S, for the states with S=3/2, change their values and sign under the variation of the Heisenberg exchange and double exchange parameters during the cluster deformation. The single-particle ZFS parameters D i and the exchange effects determine the observed strong positive ( DS=1.5-6 cm -1) and negative ( DS=-1.7 to -5 cm -1) cluster ZFS splittings of the ground Sgr=3/2 states of the [4Fe-4S] + clusters. Positive (negative) cluster ZFS parameters D S correspond to negative (positive) individual ZFS parameters D1-3 [Fe(II)]. The theory explains the observation of small negative effective hyperfine constants A i for the Sgr=3/2 clusters with positive and negative cluster ZFS parameters D S. The correlations between the individual and

  16. Multiferroicity and skyrmions carrying electric polarization in GaV4S8.

    PubMed

    Ruff, Eugen; Widmann, Sebastian; Lunkenheimer, Peter; Tsurkan, Vladimir; Bordács, Sandor; Kézsmárki, Istvan; Loidl, Alois

    2015-11-01

    Skyrmions are whirl-like topological spin objects with high potential for future magnetic data storage. A fundamental question that is relevant to both basic research and application is whether ferroelectric (FE) polarization can be associated with skyrmions' magnetic texture and whether these objects can be manipulated by electric fields. We study the interplay between magnetism and electric polarization in the lacunar spinel GaV4S8, which undergoes a structural transition associated with orbital ordering at 44 K and reveals a complex magnetic phase diagram below 13 K, including ferromagnetic, cycloidal, and Néel-type skyrmion lattice (SkL) phases. We found that the orbitally ordered phase of GaV4S8 is FE with a sizable polarization of ~1 μC/cm(2). Moreover, we observed spin-driven excess polarizations in all magnetic phases; hence, GaV4S8 hosts three different multiferroic phases with coexisting polar and magnetic order. These include the SkL phase, where we predict a strong spatial modulation of FE polarization close to the skyrmion cores. By taking into account the crystal symmetry and spin patterns of the magnetically ordered phases, we identify exchange striction as the main microscopic mechanism behind the spin-driven FE polarization in each multiferroic phase. Because GaV4S8 is unique among known SkL host materials owing to its polar crystal structure and the observed strong magnetoelectric effect, this study is an important step toward the nondissipative electric field control of skyrmions. PMID:26702441

  17. Multiferroicity and skyrmions carrying electric polarization in GaV4S8

    PubMed Central

    Ruff, Eugen; Widmann, Sebastian; Lunkenheimer, Peter; Tsurkan, Vladimir; Bordács, Sandor; Kézsmárki, Istvan; Loidl, Alois

    2015-01-01

    Skyrmions are whirl-like topological spin objects with high potential for future magnetic data storage. A fundamental question that is relevant to both basic research and application is whether ferroelectric (FE) polarization can be associated with skyrmions’ magnetic texture and whether these objects can be manipulated by electric fields. We study the interplay between magnetism and electric polarization in the lacunar spinel GaV4S8, which undergoes a structural transition associated with orbital ordering at 44 K and reveals a complex magnetic phase diagram below 13 K, including ferromagnetic, cycloidal, and Néel-type skyrmion lattice (SkL) phases. We found that the orbitally ordered phase of GaV4S8 is FE with a sizable polarization of ~1 μC/cm2. Moreover, we observed spin-driven excess polarizations in all magnetic phases; hence, GaV4S8 hosts three different multiferroic phases with coexisting polar and magnetic order. These include the SkL phase, where we predict a strong spatial modulation of FE polarization close to the skyrmion cores. By taking into account the crystal symmetry and spin patterns of the magnetically ordered phases, we identify exchange striction as the main microscopic mechanism behind the spin-driven FE polarization in each multiferroic phase. Because GaV4S8 is unique among known SkL host materials owing to its polar crystal structure and the observed strong magnetoelectric effect, this study is an important step toward the nondissipative electric field control of skyrmions. PMID:26702441

  18. Evidence for new-flavor production at the UPSILON(4S)

    SciTech Connect

    Bebek, C.; Haggerty, J.; Izen, J.M.; Longuemare, C.; Loomis, W.A.; Pipkin, F.M.; Rohlf, J.; Tanenbaum, W.; Wilson, R.; Sadoff, A.J.; Bridges, D.L.; Chadwick, K.; Ganci, P.; Kagan, H.; Kass, R.; Lobkowicz, F.; Melissinos, A.; Olsen, S.L.; Poling, R.; Rosenfeld, C.; Rucinski, G.; Thorndike, E.H.; Warren, G.; Bechis, D.; Mueller, J.J.; Potter, D.; Sannes, F.; Skubic, P.; Stone, R.; Brody, A.; Chen, A.; Goldberg, M.; Horwitz, N.; Kandaswamy, J.; Kooy, H.; Lariccia, P.; Moneti, G.C.; Alam, M.S.; Csorna, S.E.; Panvini, R.S.; Poucher, J.S.; Andrews, D.; Berkelman, K.; Cabenda, R.; Cassel, D.G.; DeWire, J.W.; Ehrlich, R.; Ferguson, T.; Gentile, T.; Gilchriese, M.G.D.; Gittelman, B.; Hartill, D.L.; Herrup, D.; Herzlinger, M.; Kreinick, D.L.; Mistry, N.B.; Nordberg, E.; Perchonok, R.; Plunkett, R.; Shinsky, K.A.; Siemann, R.H.; Silverman, A.; Stein, P.C.; Stone, S.; Talman, R.; Thonemann, H.G.; Weber, D.

    1981-01-12

    An enhancement has been observed in the inclusive cross section for direct single electrons produced in e/sup +/e/sup -/ annihilation at the UPSILON(4S). This is interpreted as evidence for a new weakly decaying particle, the B meson. A branching ratio for B..-->..Xe..nu.. of (13 +- 3( +- 3))% is inferred, where the first set of errors is statistical and the estimated systematic error is enclosed in parentheses.

  19. XP-PCM Calculations of High Pressure Structural and Vibrational Properties of P4S3.

    PubMed

    Pagliai, Marco; Cammi, Roberto; Cardini, Gianni; Schettino, Vincenzo

    2016-07-14

    The structure and the vibrational properties of the P4S3 crystal at high pressures are discussed by application of the XP-PCM method. The vibrational assignment has been clarified. The structure and the electron distribution changes as a function of pressure are analyzed. The pressure effect on the vibrational frequencies is satisfactorily reproduced and discussed in terms of confinement and structure relaxation contributions. PMID:26943701

  20. Growth and characterizations of BaGa4S7 crystal

    NASA Astrophysics Data System (ADS)

    Guo, Yifeng; Zhou, Yuqiao; Lin, Xinsong; Chen, Weidong; Ye, Ning

    2014-10-01

    The nonlinear optical (NLO) BaGa4S7 polycrystalline materials with stoichiometric composition were synthesized from BaS, Ga, and S via solid-state reactions in the dual temperature zone rocking furnace with excess sulfur, and crystal BaGa4S7 for the mid-infrared (IR) was grown with Bridgman-Stockbarger technique. The ultraviolet (UV) and IR optical absorption edges of crystal BaGa4S7 were found to be at 350 nm and 13.7 μm, respectively. Its thermal conductivities at 50 °C were 1.45 W/(m K), 1.58 W/(m K) and 1.68 W/(m K) along a-, b- and c-directions, respectively. The laser damage threshold of a single crystal was about 7.1 J/cm2 at 2.1 μm, and 26.2 J/cm2 at 9.58 μm. The idler non-critical phase-matching OPO wavelength was between 6 and 10 μm when the pumped wavelength was varied around 2.2 μm.

  1. Evaluation for 4S core nuclear design method through integration of benchmark data

    SciTech Connect

    Nagata, A.; Tsuboi, Y.; Moriki, Y.; Kawashima, M.

    2012-07-01

    The 4S is a sodium-cooled small fast reactor which is reflector-controlled for operation through core lifetime about 30 years. The nuclear design method has been selected to treat neutron leakage with high accuracy. It consists of a continuous-energy Monte Carlo code, discrete ordinate transport codes and JENDL-3.3. These two types of neutronic analysis codes are used for the design in a complementary manner. The accuracy of the codes has been evaluated by analysis of benchmark critical experiments and the experimental reactor data. The measured data used for the evaluation is critical experimental data of the FCA XXIII as a physics mockup assembly of the 4S core, FCA XVI, FCA XIX, ZPR, and data of experimental reactor JOYO MK-1. Evaluated characteristics are criticality, reflector reactivity worth, power distribution, absorber reactivity worth, and sodium void worth. A multi-component bias method was applied, especially to improve the accuracy of sodium void reactivity worth. As the result, it has been confirmed that the 4S core nuclear design method provides good accuracy, and typical bias factors and their uncertainties are determined. (authors)

  2. Synthesis of (2R, 3R)-epigallocatechin-3-O-(4-hydroxybenzoate), a novel catechin from Cistus salvifolius, and evaluation of its proteasome inhibitory activities.

    PubMed

    Osanai, Kumi; Huo, Congde; Landis-Piwowar, Kristin R; Dou, Q Ping; Chan, Tak Hang

    2007-08-01

    The total and semi syntheses of (2R, 3R)-epigallocatechin-3-O-(4-hydroxybenzoate), a novel catechin from Cistus salvifolius, was accomplished. The proteasome inhibition and cytotoxic activities of the synthetic compound and its acetyl derivative were studied and compared with (2R, 3R)-epigallocatechin-3-gallate (EGCG), the active component from green tea. PMID:21152270

  3. Strategic focus on 3R principles reveals major reductions in the use of animals in pharmaceutical toxicity testing.

    PubMed

    Törnqvist, Elin; Annas, Anita; Granath, Britta; Jalkesten, Elisabeth; Cotgreave, Ian; Öberg, Mattias

    2014-01-01

    The principles of the 3Rs, Replacement, Reduction and Refinement, are being increasingly incorporated into legislations, guidelines and practice of animal experiments in order to safeguard animal welfare. In the present study we have studied the systematic application of 3R principles to toxicological research in the pharmaceutical industry, with particular focus on achieving reductions in animal numbers used in regulatory and investigatory in vivo studies. The work also details major factors influencing these reductions including the conception of ideas, cross-departmental working and acceptance into the work process. Data from 36 reduction projects were collected retrospectively from work between 2006 and 2010. Substantial reduction in animal use was achieved by different strategies, including improved study design, method development and project coordination. Major animal savings were shown in both regulatory and investigative safety studies. If a similar (i.e. 53%) reduction had been achieved simultaneously within the twelve largest pharmaceutical companies, the equivalent reduction world-wide would be about 150,000 rats annually. The results point at the importance of a strong 3R culture, with scientific engagement, collaboration and a responsive management being vital components. A strong commitment in leadership for the 3R is recommended to be translated into cross-department and inter-profession involvement in projects for innovation, validation and implementation. Synergies between all the three Rs are observed and conclude that in silico-, in vitro- and in vivo-methods all hold the potential for applying the reduction R and should be consequently coordinated at a strategic level. PMID:25054864

  4. Strategic Focus on 3R Principles Reveals Major Reductions in the Use of Animals in Pharmaceutical Toxicity Testing

    PubMed Central

    Törnqvist, Elin; Annas, Anita; Granath, Britta; Jalkesten, Elisabeth; Cotgreave, Ian; Öberg, Mattias

    2014-01-01

    The principles of the 3Rs, Replacement, Reduction and Refinement, are being increasingly incorporated into legislations, guidelines and practice of animal experiments in order to safeguard animal welfare. In the present study we have studied the systematic application of 3R principles to toxicological research in the pharmaceutical industry, with particular focus on achieving reductions in animal numbers used in regulatory and investigatory in vivo studies. The work also details major factors influencing these reductions including the conception of ideas, cross-departmental working and acceptance into the work process. Data from 36 reduction projects were collected retrospectively from work between 2006 and 2010. Substantial reduction in animal use was achieved by different strategies, including improved study design, method development and project coordination. Major animal savings were shown in both regulatory and investigative safety studies. If a similar (i.e. 53%) reduction had been achieved simultaneously within the twelve largest pharmaceutical companies, the equivalent reduction world-wide would be about 150,000 rats annually. The results point at the importance of a strong 3R culture, with scientific engagement, collaboration and a responsive management being vital components. A strong commitment in leadership for the 3R is recommended to be translated into cross-department and inter-profession involvement in projects for innovation, validation and implementation. Synergies between all the three Rs are observed and conclude that in silico-, in vitro- and in vivo-methods all hold the potential for applying the reduction R and should be consequently coordinated at a strategic level. PMID:25054864

  5. (1S,2R,2'S)- and (1S,2S, 2'S)-1-phenyl-2-phenylthio-2-(tetrahydropyran-2'-ylthio)ethanol diastereoisomers at 193 K.

    PubMed

    Kansikas, J; Sipilä, K

    2000-11-01

    In the synthesis of 1-phenyl-2-phenylthio-2-(tetrahydropyran-2-ylthio)ethanol, C(19)H(22)O(2)S(2), four diastereoisomers are formed. Two non-centrosymmetric enantiomeric forms which crystallize in space groups P2(1)2(1)2(1) and Pna2(1) are presented. The former has an intramolecular hydrogen bond between the hydroxyl group and the O atom of the tetrahydropyran ring. In the latter isomer, the hydroxyl group forms an intermolecular hydrogen bond to the O atom of the tetrahydropyranyl group of a neighbouring molecule, joining the molecules into chains in the c-axis direction; the O.O distances are 2.962 (4) and 2.764 (3) A, respectively. The tetrahydropyran rings are in chair conformations in both isomers and the S side chain has an equatorial orientation in the former, but an axial orientation in the latter molecule. PMID:11077307

  6. The effects of D3R on TLR4 signaling involved in the regulation of METH-mediated mast cells activation.

    PubMed

    Xue, Li; Geng, Yan; Li, Ming; Jin, Yao-Feng; Ren, Hui-Xun; Li, Xia; Wu, Feng; Wang, Biao; Cheng, Wei-Ying; Chen, Teng; Chen, Yan-Jiong

    2016-07-01

    Accumulating studies have revealed that the dopamine D3 receptor (D3R) plays an important role in methamphetamine (METH) addiction. However, the action of D3R on METH-mediated immune response and the underlying mechanism remain unclear. Mast cells (MCs) are currently identified as effector cells in many processes of immune responses, and MC activation is induced by various stimuli such as lipopolysaccharide (LPS). Moreover, CD117 and FcεRI are known as MC markers due to their specific expression in MCs. To investigate the effects of D3R on METH-mediated alteration of LPS-induced MCs activation and the underlying mechanism, in this study, we examined the expression of CD117 and FcεRI in the intestines of wild-type (D3R(+/+)) and D3R-deficient (D3R(-/-)) mice. We also measured the production of MC-derived cytokines, including TNF-α, IL-6, IL-4, IL-13 and CCL-5, in the bone marrow-derived mast cells (BMMCs) of WT and D3R(-/-) mice. Furthermore, we explored the effects of D3R on METH-mediated TLR4 and downstream MAPK and NF-κB signaling induced by LPS in mouse BMMCs. We found that METH suppressed MC activation induced by LPS in the intestines of D3R(+/)mice. In contrast, LPS-induced MC activation was less affected by METH in D3R(-/-) mice. Furthermore, METH altered LPS-induced cytokine production in BMMCs of D3R(+/+) mice but not D3R(-/-) mice. D3R was also involved in METH-mediated modulation of LPS-induced expression of TLR4 and downstream MAPK and NF-κB signaling molecules in mouse BMMCs. Taken together, our findings demonstrate that the effect of D3R on TLR4 signaling may be implicated in the regulation of METH-mediated MCs activation induced by LPS. PMID:27156126

  7. Investigation of novel decay B _____ ____(2S)____K at BaBar

    SciTech Connect

    Schalch, Jacob; /Oberlin Coll. /SLAC

    2011-06-22

    We investigate the undocumented B meson decay, B{sup +} {yields} {Psi}(2S){omega}K{sup +}. The data were collected with the BaBar detector at the SLAC PEP-II asymmetric-energy e{sup +}e{sup -} collier operating at the {gamma}(4S) resonance, a center-of-mass energy of 10.58 GeV/c{sup 2}. The {gamma}(4S) resonance primarily decays to pairs of B-mesons. The BaBar collaboration at the PEP-II ring was located at the SLAC National Accelerator Laboratory and was designed to study the collisions of positrons and electrons. The e{sup -}e{sup +} pairs collide at asymmetric energies, resulting in a center of mass which is traveling at relativistic speeds. The resulting time dilation allows the decaying particles to travel large distances through the detector before undergoing their rapid decays, a process that occurs in the in the center of mass frame over extremely small distances. As they travel through silicon vertex trackers, a drift chamber, a Cerenkov radiation detector and finally an electromagnetic calorimeter, we measure the charge, energy, momentum, and particle identification in order to reconstruct the decays that have occurred. While all well understood mesons currently fall into the qq model, the quark model has no a priori exclusion of higher configuration states such as qqqq which has led experimentalists and theorists alike to seek evidence supporting the existence of such states. Currently, there are hundreds of known decay modes of the B mesons cataloged by the Particle Data Group, but collectively they only account for approximately 60% of the B branching fraction and it is possible that many more exist.

  8. THERMODYNAMIC PROPERTIES OF THE METALLIC SYSTEM Au(111)-(3×3)R30∘-Pd

    NASA Astrophysics Data System (ADS)

    Chadli, R.; Kheffache, S.; Khater, A.

    2016-02-01

    This work constitutes an analysis of the thermodynamic properties in the ordered metallic surface alloy system Au(111)-(3×3)R30∘-Pd. The equilibrium structural characteristics as well as the thermodynamic functions are examined by the matching method, associated with real space Green’s function formalism, evaluated in the harmonic approximation. Our numerical results, for this metallic system of surface alloy, show in particular a significant dependence between the thermodynamic properties and the coordination number and the values of the force constants.

  9. Electron spin-lattice relaxation of the (4Fe-4S) ferredoxin from B. stearothermophilus. Comparison with other iron proteins

    NASA Astrophysics Data System (ADS)

    Bertrand, Patrick; Gayda, Jean-Pierre; Rao, K. Krishna

    1982-05-01

    The temperature dependence of the electron spin-lattice relaxation time T1 of the (4Fe-4S) ferredoxin from Bacillus stearothermophilus is studied in the range 1.2 to 40 K. This dependence is similar to that observed for the (2Fe-2S) ferredoxin from Spirulina maxima and can be interpreted with the same relaxation processes [J.P. Gayda, P. Bertrand, A. Deville, C. More, G. Roger, J.F. Gibson, and R. Cammack, Biochim. Biophys. Acta 581, 15 (1979)]. In particular, between 4 and 15 K, the data are well fitted by a second-order Raman process involving three-dimensional phonons, with a Debye temperature of about 60 K (45 cm-1). This would give an estimation of the highest frequency of the vibrations which can propagate through the three-dimensional proteinic medium. In the highest temperature range (T≳30 K) the results are interpreted with an Orbach process involving an excited level of energy 120 cm-1. This process could be induced by the localized vibrations of the active site. Finally, these results are compared to those recently reported for some hemoproteins [H.J. Stapleton, J.P. Allen, C.P. Flynn, D.G. Stinson, and S.R. Kurtz, Phys. Rev. Lett. 45, 1456 (1980)]. Below 15 K, the temperature dependence of T1 for these samples is similar to that observed for the iron-sulfur proteins and may be interpreted in the same way. Our interpretation is compared to the fractal model proposed by Stapleton et al.

  10. Measurement of the muonium 1S-2S transition frequency

    SciTech Connect

    Jungmann, K.; Baird, P.E.G.; Barr, J.R.M.; Berkeland, D.; Boshier, M.G.; Braun, B.; Eaton, G.H.; Ferguson, A.I.; Geerds, H.; Hughes, V.W.; Maas, F.; Matthias, B.E.; Matousek, P.; Persaud, M.; zu Putlitz, G.; Reinhard, I.; Riis, E.; Sandars, P.G.H.; Schwarz, W.; Toner, W.T.; Towrie, M.; Willmann, L.; Woodle, K.A.; Woodman, G.

    1995-04-01

    Resonant ionization spectroscopy has been employed for measuring the 1{sup 2}{ital S}{sub 1/2}{minus}2{sup 2}{ital S}{sub 1/2} frequency difference in the hydrogen-like muonium atom to 2 455 529 002(33)(46) MHz. The 1S-2S two-photon transition was induced Doppler-free using two counter-propagating laser beams. The 2S state was photo-ionized by a third photon from the same laser field. The measurement agrees with QED theory within two standard deviations. The mass of the positive muon can be extracted from the isotope shifts in this transition to hydrogen and deuterium to 105.658 80(29)(43) MeV/c{sup 2}. {copyright} 1995 {ital American} {ital Institute} {ital of} {ital Physics}

  11. Hot gas, regenerative, supported H.sub.2 S sorbents

    NASA Technical Reports Server (NTRS)

    Voecks, Gerald E. (Inventor); Sharma, Pramod K. (Inventor)

    1993-01-01

    Efficient, regenerable sorbents for removal of H.sub.2 S from moderately high temperature (usually 200.degree. C.-550.degree.C.) gas streams comprise a porous, high surface area aluminosilicate support, suitably a zeolite, and most preferably a sodium deficient zeolite containing 1 to 20 weight percent of binary metal oxides. The binary oxides are a mixture of a Group VB or VIB metal oxide with a Group IB, IIB or VIII metal oxide such as V-Zn-O, V-Cu-O, Cu-Mo-O, Zn-Mo-O or Fe-Mo-O contained in the support. The sorbent effectively removes H.sub.2 S from the host gas stream in high efficiency and can be repetitively regenerated at least 10 times without loss of activity.

  12. Optical Properties of In2S3 Thin Films

    NASA Astrophysics Data System (ADS)

    Bodnar, I. V.; Polubok, V. A.

    2014-11-01

    Laser deposition on substrates at temperatures of 480, 610, and 720 K has been used to produce films of the compound In2S3. Single crystals of this compound grown by the Bridgeman-Stockbarger method are used as targets. The composition is determined by x-ray spectral analysis and the structure of the resulting crystals and films is determined by x-ray methods. Both the crystals and the films crystallize into a tetragonal spinel structure. Transmission spectra in the region of the intrinsic absorption edge are used to determine the width of the band gap and the refractive index of the In2S3 films. The band gap width is found to increase as the substrate temperature is raised.

  13. The Cometa Consortium and the PI2S2 project .

    NASA Astrophysics Data System (ADS)

    Becciani, U.

    The new grid e-Infrastructure in Sicily is offering new perspectives and important resources and starts to give new great opportunity for research using the HPC resources. We will show the infrastructure of the Cometa Consortium, the main activities of the PI2S2 project and the new challenges, mainly in the HPC area, that the project is carrying out. A simple but useful procedure for running HPC is also described.

  14. H2S mediated thermal and photochemical methane activation

    PubMed Central

    Baltrusaitis, Jonas; de Graaf, Coen; Broer, Ria; Patterson, Eric

    2013-01-01

    Sustainable, low temperature methods of natural gas activation are critical in addressing current and foreseeable energy and hydrocarbon feedstock needs. Large portions of natural gas resources are still too expensive to process due to their high content of hydrogen sulfide gas (H2S) in mixture with methane, CH4, altogether deemed as sub-quality or “sour” gas. We propose a unique method for activating this “sour” gas to form a mixture of sulfur-containing hydrocarbon intermediates, CH3SH and CH3SCH3, and an energy carrier, such as H2. For this purpose, we computationally investigated H2S mediated methane activation to form a reactive CH3SH species via direct photolysis of sub-quality natural gas. Photoexcitation of hydrogen sulfide in the CH4+H2S complex results in a barrier-less relaxation via a conical intersection to form a ground state CH3SH+H2 complex. The resulting CH3SH can further be heterogeneously coupled over acidic catalysts to form higher hydrocarbons while the H2 can be used as a fuel. This process is very different from a conventional thermal or radical-based processes and can be driven photolytically at low temperatures, with enhanced controllability over the process conditions currently used in industrial oxidative natural gas activation. Finally, the proposed process is CO2 neutral, as opposed to the currently industrially used methane steam reforming (SMR). PMID:24150813

  15. Thermodynamics and kinetics of defects in Li2S

    NASA Astrophysics Data System (ADS)

    Moradabadi, Ashkan; Kaghazchi, Payam

    2016-05-01

    Li2S is the final product of lithiation of sulfur cathodes in lithium-sulfur (Li-S) batteries. In this work, we study formation and diffusion of defects in Li2S. It is found that for a wide range of voltages (referenced to metal Li) between 0.17 V and 2.01 V, positively charged interstitial Li (Li+) is the most favorable defect type with a fixed formation energy of 1.02 eV. The formation energy of negatively charged Li vacancy ( VL i - ) is also constant, and it is only 0.13 eV higher than that of Li+. For a narrow range of voltages between 0.00 V and 0.17 V, the formation energy of neutral S vacancy is the lowest and it decreases with decreasing the cell voltage. The energy barrier for Li+ diffusion (0.45 eV), which takes place via an exchange mechanism, is 0.18 eV higher than that for VL i - (0.27 eV), which takes place via a single vacancy hopping. Considering formation energies and diffusion barriers, we find that ionic conductivity in Li2S is due to both Li+ and VL i - , but the latter mechanism being slightly more favorable.

  16. Pru du 2S albumin or Pru du vicilin?

    PubMed

    Garino, Cristiano; De Paolis, Angelo; Coïsson, Jean Daniel; Arlorio, Marco

    2015-06-01

    A short partial sequence of 28 amino acids is all the information we have so far about the putative allergen 2S albumin from almond. The aim of this work was to analyze this information using mainly bioinformatics tools, in order to verify its rightness. Based on the results reported in the paper describing this allergen from almond, we analyzed the original data of amino acids sequencing through available software. The degree of homology of the almond 12kDa protein with any other known 2S albumin appears to be much lower than the one reported in the paper that firstly described it. In a publicly available cDNA library we discovered an expressed sequence tag which translation generates a protein that perfectly matches both of the sequencing outputs described in the same paper. A further analysis indicated that the latter protein seems to belong to the vicilin superfamily rather than to the prolamin one. The fact that also vicilins are seed storage proteins known to be highly allergenic would explain the IgE reactivity originally observed. Based on our observations we suggest that the IgE reactive 12kDa protein from almond currently known as Pru du 2S albumin is in reality the cleaved N-terminal region of a 7S vicilin like protein. PMID:25854802

  17. Crystal structure of (+)-methyl (E)-3-[(2S,4S,5R)-2-amino-5-hy-droxy-meth-yl-2-tri-chloro-methyl-1,3-dioxolan-4-yl]-2-methyl-prop-2-enoate.

    PubMed

    Oishi, Takeshi; Yasushima, Daichi; Yuasa, Kihiro; Sato, Takaaki; Chida, Noritaka

    2016-03-01

    In the title compound, C10H14Cl3NO5, the five-membered dioxolane ring adopts an envelope conformation. The C atom at the flap, which is bonded to the hy-droxy-methyl substituent, deviates from the mean plane of other ring atoms by 0.357 (5) Å. There are two intra-molecular hydrogen bonds (O-H⋯N and N-H⋯O) between the hy-droxy and amino groups, so that O- and N-bound H atoms involved in these hydrogen bonds are each disordered with equal occupancies of 0.50. The methyl 2-methyl-prop-2-enoate substituent also shows a disordered structure over two sets of sites with refined occupancies of 0.482 (5) and 0.518 (5). In the crystal, mol-ecules are connected into a dimer by an O-H⋯O hydrogen bond. The dimers are further linked by N-H⋯O, C-H⋯N and C-H⋯O inter-actions, extending a sheet structure parallel to ([Formula: see text]01). PMID:27006804

  18. Exome sequencing identifies a novel mutation in PIK3R1 as the cause of SHORT syndrome

    PubMed Central

    2014-01-01

    Background SHORT syndrome is a rare autosomal dominant condition whose name is the acronym of short stature, hyperextensibility of joints, ocular depression, Rieger anomaly and teething delay (MIM 269880). Additionally, the patients usually present a low birth weight and height, lipodystrophy, delayed bone age, hernias, low body mass index and a progeroid appearance. Case presentation In this study, we used whole-exome sequencing approaches in two patients with clinical features of SHORT syndrome. We report the finding of a novel mutation in PIK3R1 (c.1929_1933delTGGCA; p.Asp643Aspfs*8), as well as a recurrent mutation c.1945C > T (p.Arg649Trp) in this gene. Conclusions We found a novel frameshift mutation in PIK3R1 (c.1929_1933delTGGCA; p.Asp643Aspfs*8) which consists of a deletion right before the site of substrate recognition. As a consequence, the protein lacks the position that interacts with the phosphotyrosine residue of the substrate, resulting in the development of SHORT syndrome. PMID:24886349

  19. The Effects of T4 and A3/R Bacteriophages on Differentiation of Human Myeloid Dendritic Cells

    PubMed Central

    Bocian, Katarzyna; Borysowski, Jan; Zarzycki, Michał; Pacek, Magdalena; Weber-Dąbrowska, Beata; Machcińska, Maja; Korczak-Kowalska, Grażyna; Górski, Andrzej

    2016-01-01

    Bacteriophages (phages) are viruses of bacteria. Here we evaluated the effects of T4 and A3/R bacteriophages, as well as phage-generated bacterial lysates, on differentiation of human myeloid dendritic cells (DCs) from monocytes. Neither of the phages significantly reduced the expression of markers associated with differentiation of DCs and their role in the activation of T cells (CD40, CD80, CD83, CD86, CD1c, CD11c, MHC II, PD-L1, PD-L2, TLR2, TLR4, and CCR7) and phagocytosis receptors (CD64 and DEC-205). By contrast, bacterial lysate of T4 phage significantly decreased the percentages of DEC-205- and CD1c-positive cells. The percentage of DEC-205-positive cells was also significantly reduced in DCs differentiated in the presence of lysate of A3/R phage. Thus while bacteriophages do not substantially affect differentiation of DCs, some products of phage-induced lysis of bacterial cells may influence the differentiation and potentially also some functions of DCs. Our results have important implications for phage therapy of bacterial infections because during infections monocytes recruited to the site of inflammation are an important source of inflammatory DCs. PMID:27582733

  20. The Effects of T4 and A3/R Bacteriophages on Differentiation of Human Myeloid Dendritic Cells.

    PubMed

    Bocian, Katarzyna; Borysowski, Jan; Zarzycki, Michał; Pacek, Magdalena; Weber-Dąbrowska, Beata; Machcińska, Maja; Korczak-Kowalska, Grażyna; Górski, Andrzej

    2016-01-01

    Bacteriophages (phages) are viruses of bacteria. Here we evaluated the effects of T4 and A3/R bacteriophages, as well as phage-generated bacterial lysates, on differentiation of human myeloid dendritic cells (DCs) from monocytes. Neither of the phages significantly reduced the expression of markers associated with differentiation of DCs and their role in the activation of T cells (CD40, CD80, CD83, CD86, CD1c, CD11c, MHC II, PD-L1, PD-L2, TLR2, TLR4, and CCR7) and phagocytosis receptors (CD64 and DEC-205). By contrast, bacterial lysate of T4 phage significantly decreased the percentages of DEC-205- and CD1c-positive cells. The percentage of DEC-205-positive cells was also significantly reduced in DCs differentiated in the presence of lysate of A3/R phage. Thus while bacteriophages do not substantially affect differentiation of DCs, some products of phage-induced lysis of bacterial cells may influence the differentiation and potentially also some functions of DCs. Our results have important implications for phage therapy of bacterial infections because during infections monocytes recruited to the site of inflammation are an important source of inflammatory DCs. PMID:27582733

  1. Frequency and Relative Prevalence of Calcium Blips and Puffs in a Model of Small IP3R Clusters

    PubMed Central

    Qi, Hong; Huang, Yandong; Rüdiger, Sten; Shuai, Jianwei

    2014-01-01

    In this work, we model the local calcium release from clusters with a few inositol 1,4,5-trisphosphate receptor (IP3R) channels, focusing on the stochastic process in which an open channel either triggers other channels to open (as a puff) or fails to cause any channel to open (as a blip). We show that there are linear relations for the interevent interval (including blips and puffs) and the first event latency against the inverse cluster size. However, nonlinearity is found for the interpuff interval and the first puff latency against the inverse cluster size. Furthermore, the simulations indicate that the blip fraction among all release events and the blip frequency are increasing with larger basal [Ca2+], with blips in turn giving a growing contribution to basal [Ca2+]. This result suggests that blips are not just lapses to trigger puffs, but they may also possess a biological function to contribute to the initiation of calcium waves by a preceding increase of basal [Ca2+] in cells that have small IP3R clusters. PMID:24896114

  2. Preparation of 3R- and 3S-methyl isomers of the myocardial imaging agent 15-(p-IODOPHENYL)-3-methylpentadecanoic acid ({open_quotes}BMIPP{close_quotes})

    SciTech Connect

    Lin, Q. |; Luo, J.; Mokler, F.

    1996-10-01

    Iodine-123-labeled racemic BMIPP is used for clinical evaluation of heart disease. To evaluate the expected importance of configuration of the asymmetric C-3 center, we have synthesized the 3R-isomer. 6-Phenylhexanoyl chloride was condensed with thiophene (Friedel-Crafts), followed by Wolff-Kishner reduction and subsequent acylation with the ethyl-3-R-methylglutaroyl chloride, Wolff-Kishner reduction and Raney-Ni ring opening. Para Thallation (TTFA)/KI provided 3R-BMIPP, m.p. 51-52{degrees}C, [{alpha}{sub D}] = +0.74{degrees}. The diastereomeric amide mixture was prepared by reaction of racemic 3-R,S-BMIPP with (S)-(-)-{alpha}-methylbenzylamine. Chromatographic separation and HCl hydrolysis (at 175{degrees}C) provided the 3R- and 3S- (m.p. 45-46{degrees}C, [{alpha}{sub D}] = -1.67{degrees}) BMIPP isomers. The more polar amide (m.p. 93-94{degrees}C) was identical with the amide from the synthetic 3R-BMIPP (m.p., HPLC, NMR). Availability of the 3R- and 3S-BMIPP isomers will permit preparation of the radioiodinated isomers and animal evaluation to determine the effects of the methyl group configuration on myocardial uptake and metabolism.

  3. Agonist-evoked inositol trisphosphate receptor (IP3R) clustering is not dependent on changes in the structure of the endoplasmic reticulum

    PubMed Central

    Chalmers, Mark; Schell, Michael J.; Thorn, Peter

    2005-01-01

    The size and number of IP3R (inositol 1,4,5-trisphosphate receptor) clusters located on the surface of the ER (endoplasmic reticulum) is hypothesized to regulate the propagation of Ca2+ waves in cells, but the mechanisms by which the receptors cluster are not understood. Using immunocytochemistry, live-cell imaging and heterologous expression of ER membrane proteins we have investigated IP3R clustering in the basophilic cell line RBL-2H3 following the activation of native cell-surface antigen receptors. IP3R clusters are present in resting cells, and upon receptor stimulation, form larger aggregates. Cluster formation and maintenance required the presence of extracellular Ca2+ in both resting and stimulated cells. Using transfection with a marker of the ER, we found that the ER itself also showed structural changes, leading to an increased number of ‘hotspots’, following antigen stimulation. Surprisingly, however, when we compared the ER hotspots and IP3R clusters, we found them to be distinct. Imaging of YFP (yellow fluorescent protein)–IP3R transfected in to living cells confirmed that IP3R clustering increased upon stimulation. Photobleaching experiments showed that the IP3R occupied a single contiguous ER compartment both before and after stimulation, suggesting a dynamic exchange of IP3R molecules between the clusters and the surrounding ER membrane. It also showed a decrease in the mobile fraction after cell activation, consistent with receptor anchoring within clusters. We conclude that IP3R clustering in RBL-2H3 cells is not simply a reflection of bulk-changes in ER structure, but rather is due to the receptor undergoing homotypic or heterotypic protein–protein interactions in response to agonist stimulation. PMID:16274363

  4. Parallel effects of the inversion In(3R)Payne on body size across the North American and Australian clines in Drosophila melanogaster.

    PubMed

    Kapun, M; Schmidt, C; Durmaz, E; Schmidt, P S; Flatt, T

    2016-05-01

    Chromosomal inversions are thought to play a major role in climatic adaptation. In D. melanogaster, the cosmopolitan inversion In(3R)Payne exhibits latitudinal clines on multiple continents. As many fitness traits show similar clines, it is tempting to hypothesize that In(3R)P underlies observed clinal patterns for some of these traits. In support of this idea, previous work in Australian populations has demonstrated that In(3R)P affects body size but not development time or cold resistance. However, similar data from other clines of this inversion are largely lacking; finding parallel effects of In(3R)P across multiple clines would considerably strengthen the case for clinal selection. Here, we have analysed the phenotypic effects of In(3R)P in populations originating from the endpoints of the latitudinal cline along the North American east coast. We measured development time, egg-to-adult survival, several size-related traits (femur and tibia length, wing area and shape), chill coma recovery, oxidative stress resistance and triglyceride content in homokaryon lines carrying In(3R)P or the standard arrangement. Our central finding is that the effects of In(3R)P along the North American cline match those observed in Australia: standard arrangement lines were larger than inverted lines, but the inversion did not influence development time or cold resistance. Similarly, In(3R)P did not affect egg-to-adult survival, oxidative stress resistance and lipid content. In(3R)P thus seems to specifically affect size traits in populations from both continents. This parallelism strongly suggests an adaptive pattern, whereby the inversion has captured alleles associated with growth regulation and clinal selection acts on size across both continents. PMID:26881839

  5. NH{sub 3}/H{sub 2}S advances

    SciTech Connect

    Gupta, R.P.; Gangwal, S.K.; Krishnan, G.N.; Hung, S.L.

    1993-08-01

    The following preliminary conclusions can be derived from the above-mentioned experimental results: (1) HTSR-1, a nickel-based catalyst has a high activity for NH{sub 3} decomposition at 725{degree}C in simulated coal gas streams under low H{sub 2}S levels. (2) HTSR-1 when mixed with a desulfurization sorbent such as zinc titanate could decompose NH{sub 3} effectively until the removal of H{sub 2}S by zinc titanate decreases. (3) HTSR-1 continues to exhibit an activity for NH{sub 3} decomposition even after exposure to zinc titanate regeneration conditions. (4) MoS{sub 2} is also a catalyst for the decomposition of NH{sub 3}. However, its surface area needs to be maintained by addition of suitable stabilizing agents for sustained activity. Sorbent-catalyst samples of zinc titanate doped with cobalt-molybdenum were prepared by first crushing and sieving pellets of zinc titanate sorbents (L-3774M). The zinc titanate powders were then placed into an aqueous solution having the desired total amount of molybdenum (in the form of molybdic acid). The water was then dried and the powder heated and calcined. To add cobalt to the Mo-coated powder, the powder was then placed into a solution of cobalt nitrate containing the appropriate amount of the cobalt precursor followed by drying and calcination. The sorbent-catalyst samples were then activated (presulfided) by introducing H{sub 2}S in a controlled reducing environment. Samples of nickel-molybdenum-zinc titanate were prepared by using nickel nitrate instead of cobalt nitrate in the described procedure.

  6. Advanced process selectively removes H/sub 2/S

    SciTech Connect

    Not Available

    1981-06-08

    A selective H/sub 2/S-removal scheme called the HS process is being tested at a New Mexico pilot plant having an 18-in-diam contactor, a 24-in-diam stripping still, and a 30-gpm solution flow capacity. The test program goals are to (1) demonstrate the technical and economic superiority of the process over other options, and (2) redefine mass-transfer and ray hydraulic data for scale-up to commercial size. The technology combines a selective chemical solvent based on methyldiethanolamine (MDEA), a unique contactor design, and an innovative selective contactor tray.

  7. Evidence for an essential histidine residue in 4S-limonene synthase and other terpene cyclases.

    PubMed

    Rajaonarivony, J I; Gershenzon, J; Miyazaki, J; Croteau, R

    1992-11-15

    (4S)-Limonene synthase, isolated from glandular trichome secretory cell preparations of Mentha x piperita (peppermint) leaves, catalyzes the metal ion-dependent cyclization of geranyl pyrophosphate, via 3S-linalyl pyrophosphate, to (-)-(4S)-limonene as the principal product. Treatment of this terpene cyclase with the histidine-directed reagent diethyl pyrocarbonate at a concentration of 0.25 mM resulted in 50% loss of enzyme activity, and this activity could be completely restored by treatment of the preparation with 5 mM hydroxylamine. Inhibition with diethyl pyrocarbonate was distinguished from inhibition with thiol-directed reagents by protection studies with histidine and cysteine carried out at varying pH. Inactivation of the cyclase by dye-sensitized photooxidation in the presence of rose bengal gave further indication of the presence of a readily modified histidine residue. Protection of the enzyme against inhibition with diethyl pyrocarbonate was afforded by the substrate geranyl pyrophosphate in the presence of Mn2+, and by the sulfonium ion analog of the linalyl carbocation intermediate of the reaction in the presence of inorganic pyrophosphate plus Mn2+, suggesting that an essential histidine residue is located at or near the active site. Similar studies on the inhibition of other monoterpene and sesquiterpene cyclases with diethyl pyrocarbonate suggest that a histidine residue (or residues) may play an important role in catalysis by this class of enzymes. PMID:1444454

  8. An Arabic dictionary of technical alchemical terms: MS Sprenger 1908 of the Staatsbibliothek zu Berlin (fols. 3r-6r).

    PubMed

    Ferrario, Gabriele

    2009-03-01

    The Arabic MS Sprenger 1908 (Staatsbibliothek, Berlin) is a handbook of medieval alchemy. Among the works it preserves, we can find the only extant witness to the Arabic original of the well-known Liber de aluminibus et salibus. In this paper, I focus on a detailed alchemical dictionary preserved in this manuscript (fols. 3r-6r) whose explicit aim is to clarify the meaning of the secret language used by the alchemists to conceal the names of substances and operations. Other versions of the same alchemical lexicon are found in Syriac and karsuni in MSS Oriental 1593 and Egerton 709, both preserved in the British Library. After describing these manuscripts, I analyse the contents of this dictionary, its structure, its different versions, and the features of the alchemical language that it attests to, providing some examples to show how this kind of dictionary is still a useful tool for the contemporary researcher. PMID:19831258

  9. Study of structural, electronic and elastic properties of RPd{sub 3} (R = Lu and Sc) compounds

    SciTech Connect

    Thakur, Veena Pagare, Gitanjali Chouhan, S. S.; Sanyal, S. P.

    2014-04-24

    The structural, electronic and elastic properties of nonmagnetic RPd{sub 3} (R = Lu and Sc) compounds, which crystallize in AuCu{sub 3}-type structure, are studied using first principles density functional theory based on full potential linearized augmented plane wave (FP-LAPW) method. The calculations are carried out within the PBE-GGA and WC-GGA for the exchange correlation potential. Our calculated ground state properties such as lattice constant (a0), bulk modulus (B) and its pressure derivative (B’) are in good agreement with the experimental results. We first time predict the elastic constants for these compounds using different approximations of GGA. These RPd{sup 3} compounds are found to be ductile in nature in accordance with Pugh’s criteria. The computed electronic band structures and density of states show metallic character of these compounds.

  10. Dimorphism of RF3 ( R = La-Nd) crystals based on the data of X-ray diffraction studies

    NASA Astrophysics Data System (ADS)

    Bolotina, N. B.; Chernaya, T. S.; Verin, I. A.; Khrykina, O. N.; Sobolev, B. P.

    2016-01-01

    The ratio of two forms of tysonite in nominally pure single crystals of RF3 ( R = La-Nd) obtained from melts under identical conditions (the as-grown state) is studied for the first time by X-ray diffraction. Crystals of RF3 with R = La-Nd belong to the β-LaF3 structural type (space group Pbar 3c1, Z = 6) and form twins. Samples 0.2-0.4 in diameter contain inclusions of the high-temperature a form (space group P63/ mmc, Z = 2). It is shown that twinning and dimorphism of the RF3 crystals ( R = La-Nd) have a common structural basis.

  11. The fate of the 2√3 × 2√3R(30°) silicene phase on Ag(111)

    SciTech Connect

    Liu, Zhi-Long; Wang, Mei-Xiao; Liu, Canhua E-mail: depadova@ism.cnr.it Jia, Jin-Feng; Vogt, Patrick; Quaresima, Claudio; Ottaviani, Carlo; De Padova, Paola E-mail: depadova@ism.cnr.it; Olivieri, Bruno; Lay, Guy Le E-mail: depadova@ism.cnr.it

    2014-09-01

    Silicon atoms deposited on Ag(111) produce various single layer silicene sheets with different buckling patterns and periodicities. Low temperature scanning tunneling microscopy reveals that one of the silicene sheets, the hypothetical √7 × √7 silicene structure, on 2√3 × 2√3 Ag(111), is inherently highly defective and displays no long-range order. Moreover, Auger and photoelectron spectroscopy measurements reveal its sudden death, to end, in a dynamic fating process at ∼300 °C. This result clarifies the real nature of the 2√3 × 2√3R(30°) silicene phase and thus helps to understand the diversity of the silicene sheets grown on Ag(111)

  12. Differing Evolutionary Histories of the ACTN3*R577X Polymorphism among the Major Human Geographic Groups

    PubMed Central

    Amorim, Carlos Eduardo G.; Acuña-Alonzo, Victor; Salzano, Francisco M.; Bortolini, Maria Cátira; Hünemeier, Tábita

    2015-01-01

    It has been proposed that the functional ACTN3*R577X polymorphism might have evolved due to selection in Eurasian human populations. To test this possibility we surveyed all available population-based data for this polymorphism and performed a comprehensive evolutionary analysis of its genetic diversity, in order to assess the action of adaptive and random mechanisms on its variation across human geographical distribution. The derived 577X allele increases in frequency with distance from Africa, reaching the highest frequencies on the American continent. Positive selection, detected by an extended haplotype homozygosisty test, was consistent only with the Eurasian data, but simulations with neutral models could not fully explain the results found in the American continent. It is possible that particularities of Native American population structure could be responsible for the observed allele frequencies, which would have resulted from a complex interaction between selective and random factors. PMID:25706920

  13. Differing evolutionary histories of the ACTN3*R577X polymorphism among the major human geographic groups.

    PubMed

    Amorim, Carlos Eduardo G; Acuña-Alonzo, Victor; Salzano, Francisco M; Bortolini, Maria Cátira; Hünemeier, Tábita

    2015-01-01

    It has been proposed that the functional ACTN3*R577X polymorphism might have evolved due to selection in Eurasian human populations. To test this possibility we surveyed all available population-based data for this polymorphism and performed a comprehensive evolutionary analysis of its genetic diversity, in order to assess the action of adaptive and random mechanisms on its variation across human geographical distribution. The derived 577X allele increases in frequency with distance from Africa, reaching the highest frequencies on the American continent. Positive selection, detected by an extended haplotype homozygosisty test, was consistent only with the Eurasian data, but simulations with neutral models could not fully explain the results found in the American continent. It is possible that particularities of Native American population structure could be responsible for the observed allele frequencies, which would have resulted from a complex interaction between selective and random factors. PMID:25706920

  14. Imidazoline derivative templated synthesis of broccoli-like Bi2S3 and its electrocatalysis towards the direct electrochemistry of hemoglobin.

    PubMed

    Chen, Xiaoqian; Wang, Qingxiang; Wang, Liheng; Gao, Feng; Wang, Wei; Hu, Zhengshui

    2015-04-15

    A broccoli-like bismuth sulfide (bBi2S3) was synthesized via a solvothermal method using a self-made imidazoline derivative of 2-undecyl-1-dithioureido-ethyl-imidazoline as the soft template. The morphology and chemical constitution of the product were characterized by scanning electron microscope (SEM), transmission electron microscope (TEM) and X-ray diffraction (XRD). Electrochemical characterization experiments show that the bBi2S3 has the higher specific surface area and standard heterogeneous electron transfer rate constant than the rod-like Bi2S3 (rBi2S3). Hemoglobin (Hb) was then chosen as a protein model to investigate the electrocatalytic property of the synthesized bBi2S3. The results show that Hb entrapped in the composite film of chitosan and bBi2S3 displays an excellent direct electrochemistry, and retains its biocatalytic activity toward the electro-reduction of hydrogen peroxide. The current response in the amperometry shows a linear response to H2O2 concentrations in the range from 0.4 to 4.8µM with high sensitivity (444µAmM(-1)) and low detection limit (0.096µM). The Michaelis-Menten constant (KM(app)) of the fabricated bioelectrode for H2O2 was determined as low as 1µM. These results demonstrate that the synthesized bBi2S3 offers a new path for the immobilization of redox-active protein and the construction of the third-generation biosensors. PMID:25437355

  15. Open Standards and Technologies in the S2S Framework

    NASA Astrophysics Data System (ADS)

    Maffei, A. R.; Rozell, E. A.; West, P.; Zednik, S.; Fox, P. A.

    2011-12-01

    The S2S Search Interface Framework provides tools and services to build customized user interfaces. It also serves as a focal point for repository managers to develop science data services and reusable components for search interfaces. The framework has been used to design a faceted browsing platform for web services, including OpenSearch and SAWSDL. This exemplar faceted browsing platform has been applied in our development of search interfaces for 1) an international open government dataset catalog and 2) a metadata catalog for biological and chemical oceanography. S2S was designed from the ground up using open standards and technologies. The framework was initially created to develop "data dashboard" interfaces on top of OpenSearch services, but has been generalized to support web services and standards with semantic annotation capabilities. We apply OWL, a W3C standard for ontologies on the Web, to create a vocabulary for the description of framework metadata. Our faceted browsing platform is heavily focused on the use of jQuery; we have created reusable user interface "widgets" that leverage OpenLayers and MapServer technology in geospatial selection and visualization, which can be used in this and future platforms. The use of open standards and technologies has enabled rapid iterations over software development lifecycles, and has kept the framework agile as new use cases and ideas have emerged.

  16. The dipole moment surface for hydrogen sulfide H2S

    NASA Astrophysics Data System (ADS)

    Azzam, Ala`a. A. A.; Lodi, Lorenzo; Yurchenko, Sergey N.; Tennyson, Jonathan

    2015-08-01

    In this work we perform a systematic ab initio study of the dipole moment surface (DMS) of H2S at various levels of theory and of its effect on the intensities of vibration-rotation transitions; H2S intensities are known from the experiment to display anomalies which have so far been difficult to reproduce by theoretical calculations. We use the transition intensities from the HITRAN database of 14 vibrational bands for our comparisons. The intensities of all fundamental bands show strong sensitivity to the ab initio method used for constructing the DMS while hot, overtone and combination bands up to 4000 cm-1 do not. The core-correlation and relativistic effects are found to be important for computed line intensities, for instance affecting the most intense fundamental band (ν2) by about 20%. Our recommended DMS, called ALYT2, is based on the CCSD(T)/aug-cc-pV(6+d)Z level of theory supplemented by a core-correlation/relativistic corrective surface obtained at the CCSD[T]/aug-cc-pCV5Z-DK level. The corresponding computed intensities agree significantly better (to within 10%) with experimental data taken directly from original papers. Worse agreement (differences of about 25%) is found for those HITRAN intensities obtained from fitted effective dipole models, suggesting the presence of underlying problems in those fits.

  17. A novel splicing mutation in the SLC9A3R1 gene in tumors from ovarian cancer patients

    PubMed Central

    KREIMANN, ERICA LORENA; RATAJSKA, MAGDALENA; KUZNIACKA, ALINA; DEMACOPULO, BRENDA; STUKAN, MACIEJ; LIMON, JANUSZ

    2015-01-01

    The aim of the present study was to investigate novel molecular markers that could improve the diagnosis of ovarian cancer patients or be of predictive value. The sequence of the sodium-hydrogen antiporter 3 regulator 1 (SLC9A3R1) gene that codes for the PDZ2 motif of the Na+/H+ exchanger regulatory factor 1 (NHERF1) protein was analyzed. Changes in migration and cell transformation, and alterations of growth factor signaling pathways have been described in cells lacking endogenous NHERF1 or expressing an isoform lacking the function of the PDZ2 domain. Exons 2 and 3, together with flanking intronic sequences of the SLC9A3R1 gene, were amplified and bi-directionally sequenced in 31 primary tumor samples from epithelial ovarian cancer patients. In total, 3 different previously undescribed mutations were detected in 8 out of 31 serous adenocarcinoma tumor samples (25.8%). Bioinformatics analysis predicted a significant effect in the splicing process as a result of the mutations that could disrupt the NHERF1 PDZ2 domain. Point mutations in consensus splicing recognition are a major cause of the splicing defects that are found in several diseases, including cancer. It has previously been shown that a lack of exon 2 and disruption of the PDZ2 domain contribute to cell transformation and leads to modifications in the physiological regulation of the conformational state of NHERF1. Further studies in bigger groups of ovarian cancer patients will determine the importance of this mutation in disease progression and patient survival. PMID:26788197

  18. Dominant Splice Site Mutations in PIK3R1 Cause Hyper IgM Syndrome, Lymphadenopathy and Short Stature.

    PubMed

    Petrovski, Slavé; Parrott, Roberta E; Roberts, Joseph L; Huang, Hongxiang; Yang, Jialong; Gorentla, Balachandra; Mousallem, Talal; Wang, Endi; Armstrong, Martin; McHale, Duncan; MacIver, Nancie J; Goldstein, David B; Zhong, Xiao-Ping; Buckley, Rebecca H

    2016-07-01

    The purpose of this research was to use next generation sequencing to identify mutations in patients with primary immunodeficiency diseases whose pathogenic gene mutations had not been identified. Remarkably, four unrelated patients were found by next generation sequencing to have the same heterozygous mutation in an essential donor splice site of PIK3R1 (NM_181523.2:c.1425 + 1G > A) found in three prior reports. All four had the Hyper IgM syndrome, lymphadenopathy and short stature, and one also had SHORT syndrome. They were investigated with in vitro immune studies, RT-PCR, and immunoblotting studies of the mutation's effect on mTOR pathway signaling. All patients had very low percentages of memory B cells and class-switched memory B cells and reduced numbers of naïve CD4+ and CD8+ T cells. RT-PCR confirmed the presence of both an abnormal 273 base-pair (bp) size and a normal 399 bp size band in the patient and only the normal band was present in the parents. Following anti-CD40 stimulation, patient's EBV-B cells displayed higher levels of S6 phosphorylation (mTOR complex 1 dependent event), Akt phosphorylation at serine 473 (mTOR complex 2 dependent event), and Akt phosphorylation at threonine 308 (PI3K/PDK1 dependent event) than controls, suggesting elevated mTOR signaling downstream of CD40. These observations suggest that amino acids 435-474 in PIK3R1 are important for its stability and also its ability to restrain PI3K activity. Deletion of Exon 11 leads to constitutive activation of PI3K signaling. This is the first report of this mutation and immunologic abnormalities in SHORT syndrome. PMID:27076228

  19. Sulfur K-Edge XAS and DFT Calculations on [Fe4S4]2+Clusters: Effects of H-bonding and Structural Distortion on Covalency and SpinTopology

    SciTech Connect

    Dey, A.; Roche, C.L.; Walters, M.A.; Hodgson, K.O.; B., Hedman; Solomon, E.I.; /Stanford U., Chem. Dept. /SLAC, SSRL

    2006-09-28

    Sulfur K-edge X-ray absorption spectroscopy of a hydrogen-bonded elongated [Fe{sub 4}S{sub 4}]{sup 2+} cube is reported. The data show that this synthetic cube is less covalent than a normal compressed cube with no hydrogen bonding. DFT calculations reveal that the observed difference in electronic structure has significant contributions from both the cluster distortion and from hydrogen bonding. The elongated and compressed Fe{sub 4}S{sub 4} structures are found to have different spin topologies (i.e., orientation of the delocalized Fe{sub 2}S{sub 2} subclusters which are antiferromagnetically coupled to each other). It is suggested that the H-bonding interaction with the counterion does not contribute to the cluster elongation. A magneto-structural correlation is developed for the Fe{sub 4}S{sub 4} cube that is used to identify the redoxactive Fe{sub 2}S{sub 2} subclusters in active sites of HiPIP and ferredoxin proteins involving these clusters.

  20. Gain of function AMP-activated protein kinase γ3 mutation (AMPKγ3R200Q) in pig muscle increases glycogen storage regardless of AMPK activation.

    PubMed

    Scheffler, Tracy L; Park, Sungkwon; Roach, Peter J; Gerrard, David E

    2016-06-01

    Chronic activation of AMP-activated protein kinase (AMPK) increases glycogen content in skeletal muscle. Previously, we demonstrated that a mutation in the ryanodine receptor (RyR1(R615C)) blunts AMPK phosphorylation in longissimus muscle of pigs with a gain of function mutation in the AMPKγ3 subunit (AMPKγ3(R200Q)); this may decrease the glycogen storage capacity of AMPKγ3(R200Q) + RyR1(R615C) muscle. Therefore, our aim in this study was to utilize our pig model to understand how AMPKγ3(R200Q) and AMPK activation contribute to glycogen storage and metabolism in muscle. We selected and bred pigs in order to generate offspring with naturally occurring AMPKγ3(R200Q), RyR1(R615C), and AMPKγ3(R200Q) + RyR1(R615C) mutations, and also retained wild-type littermates (control). We assessed glycogen content and parameters of glycogen metabolism in longissimus muscle. Regardless of RyR1(R615C), AMPKγ3(R200Q) increased the glycogen content by approximately 70%. Activity of glycogen synthase (GS) without the allosteric activator glucose 6-phosphate (G6P) was decreased in AMPKγ3(R200Q) relative to all other genotypes, whereas both AMPKγ3(R200Q) and AMPKγ3(R200Q) + RyR1(R615C) muscle exhibited increased GS activity with G6P. Increased activity of GS with G6P was not associated with increased abundance of GS or hexokinase 2. However, AMPKγ3(R200Q) enhanced UDP-glucose pyrophosphorylase 2 (UGP2) expression approximately threefold. Although UGP2 is not generally considered a rate-limiting enzyme for glycogen synthesis, our model suggests that UGP2 plays an important role in increasing flux to glycogen synthase. Moreover, we have shown that the capacity for glycogen storage is more closely related to the AMPKγ3(R200Q) mutation than activity. PMID:27302990

  1. Autoantibodies against the Second Extracellular Loop of M3R Do neither Induce nor Indicate Primary Sjögren’s Syndrome

    PubMed Central

    Chen, Yan; Zheng, Junfeng; Huang, Qiaoniang; Deng, Fengyuan; Huang, Renliang; Zhao, Wenjie; Yin, Junping; Song, Lina; Chen, Juan; Gao, Xing; Liu, Zuguo; Petersen, Frank; Yu, Xinhua

    2016-01-01

    Objectives Anti-muscarinic acetylcholine type-3 receptor (anti-M3R) autoantibodies have been suggested to be pathogenic for primary Sjögren’s syndrome (pSS), and the second extracellular loop of M3R is suspected to carry a disease-promoting epitope. In this study, we aimed to evaluate the pathogenicity of autoantibodies against peptides derived from the second extracellular loop of M3R in mice and to determine whether those autoantibodies could be used as biomarker for pSS. Methods BALB/c mice were immunized with modified linear or cyclic peptides of the second extracellular loop of M3R. The function of exocrine glands was evaluated by measuring the secretion of saliva and tears. The histological evaluations were performed by using H&E staining or direct immunofluorescence staining. Autoantibodies against linear or cyclic peptides of the second extracellular loop of M3R in human and mice were determined using ELISA. Results Immunization induced mice to produce autoantibodies against the linear or cyclic peptides of the second extracellular loop of M3R, and those autoantibodies could bind onto salivary glands. However, those mice showed neither impairment in the secretion of tears or saliva nor histological abnormality in the exocrine glands. Furthermore, passive transfer of the IgG isolated from the immunized mice into healthy mice did not induced the dysfunction of the exocrine glands. The prevalence of autoantibodies against the peptides of the second extracellular loop of M3R was low in pSS patients, and it did not differ significantly from that in healthy controls. Conclusions Our results suggest that the autoantibodies against peptides of the second extracellular loop of M3R are not pathogenic in vivo and they are not suitable as biomarkers for pSS diagnosis. PMID:26901532

  2. Calcineurin-NFATc regulates type 2 inositol 1,4,5-trisphosphate receptor (InsP3R2) expression during cardiac remodeling.

    PubMed

    Sankar, Natesan; deTombe, Pieter P; Mignery, Gregory A

    2014-02-28

    In heart, the type 2 inositol 1,4,5-triphosphate receptor (InsP3R2) is the predominant isoform expressed and is localized in the nuclear membrane of ventricular myocytes. InsP3R2-mediated Ca(2+) release regulates hypertrophy specific gene expression by modulating CaMKIIδ, histone deacetylase, and calcineurin-NFATc signaling pathways. InsP3R2 protein is a hypertrophy specific marker and is overexpressed in heart failure animal models and in humans. However, the regulation of InsP3R2 mRNA and protein expression during cardiac hypertrophy and heart failure is not known. Here we show the transcriptional regulation of the Itpr2 gene in adult cardiomyocytes. Our data demonstrates that, InsP3R2 mRNA and protein expression is activated by hypertrophic agonists and attenuated by InsP3R inhibitors 2-aminoethoxyldiphenyl borate and xestospongin-C. The Itpr2 promoter is regulated by the calcineurin-NFATc signaling pathway. NFATc1 regulates Itpr2 gene expression by directly binding to the Itpr2 promoter. The calcineurin-NFATc mediated up-regulation of the Itpr2 promoter was attenuated by cyclosporine-A. InsP3R2 mRNA and protein expression was up-regulated in calcineurin-A transgenic mice and in human heart failure. Collectively, our data suggests that ITPR2 and hypertrophy specific gene expression is regulated, in part, by a positive feedback regulation between InsP3R2 and calcineurin-NFATc signaling pathways. PMID:24415751

  3. Blockade of NK3R signaling in the PVN decreases vasopressin and oxytocin release and c-Fos expression in the magnocellular neurons in response to hypotension.

    PubMed

    Haley, Gwendolen E; Flynn, Francis W

    2008-10-01

    Tachykinin neurokinin 3 receptor (NK3R) signaling has a broad role in vasopressin (VP) and oxytocin (OT) release. Hydralazine (HDZ)-induced hypotension activates NK3R expressed by magnocellular neurons, increases plasma VP and OT levels, and induces c-Fos expression in VP and OT neurons. Intraventricular pretreatment with the specific NK3R antagonist, SB-222200, eliminates the HDZ-stimulated VP and OT release. NK3R are distributed in the central pathways conveying hypotension information to the magnocellular neurons, and the NK3R antagonist could act anywhere in the pathways. Alternatively, the antagonist could act at the NK3R expressed by the magnocellular neurons. To determine whether blockade of NK3R on magnocellular neurons impairs VP and OT release to HDZ, rats were pretreated with a unilateral PVN injection of 0.15 M NaCl or SB-222200 prior to an intravenous injection of 0.15 M NaCl or HDZ. Blood samples were taken, and brains were processed for VP/c-Fos and OT/c-Fos immunohistochemistry. Intravenous injection of 0.15 M NaCl did not alter plasma hormone levels, and little c-Fos immunoreactivity was present in the PVN. Conversely, intravenous injection of HDZ increased plasma VP and OT levels and c-Fos expression in VP and OT magnocellular neurons. Intra-PVN injection of SB-222200 prior to an intravenous injection of HDZ significantly decreased c-Fos expression in both VP and OT neurons by approximately 70% and attenuated plasma VP and OT levels by 33% and 35%, respectively. Therefore, NK3R signaling in magnocellular neurons has a critical role for the release of VP and OT in response to hypotension. PMID:18650316

  4. Photoelectric properties and charge dynamics in ZnO nanowires/Cu4Bi4S9 and ZnO nanowires/In2O3/Cu4Bi4S9 heterostructures

    NASA Astrophysics Data System (ADS)

    Liu, Xiangyang; Wang, Shun; Zhang, Jingwei; Zhang, Jiwei; Gu, Yuzong

    2014-12-01

    ZnO nanowires arrays were preformed in a horizontal double-tube system. Two types of heterostructures (ZnO nanowires/Cu4Bi4S9 and ZnO nanowires/In2O3/Cu4Bi4S9) and three-dimensional solar cells were fabricated with ZnO nanowires arrays as working electrode, In2O3 as buffer layer, and Cu4Bi4S9 as inorganic dye and hole collector. It is suggested that two types of heterostructures have the similar absorption properties with single Cu4Bi4S9. However, the results of steady state and electric field-induced surface photovoltage indicate that ZnO nanowires/In2O3/Cu4Bi4S9 exhibits the higher photovoltaic response than ZnO nanowires/Cu4Bi4S9. Using the transient surface photovoltage spectroscopy, we further studied the separation and transport mechanism of photogenerated charges. Furthermore, Cu4Bi4S9/In2O3/ZnO cells presents the better performance than Cu4Bi4S9/ZnO cells and the highest efficiencies are about 6.4% and 5.2%, respectively. It is suggested that direct paths, interface barrier, built-in electric field, and double energy level matchings between conduction bands (Cu4Bi4S9 and In2O3, In2O3 and ZnO) have obvious effect on the separation of photogenerated charges. Then we discussed the synthetic action on the charge dynamics from these factors.

  5. Superconducting properties of Rh9In4S4 single crystals

    NASA Astrophysics Data System (ADS)

    Kaluarachchi, Udhara S.; Lin, Qisheng; Xie, Weiwei; Taufour, Valentin; Bud'ko, Sergey L.; Miller, Gordon J.; Canfield, Paul C.

    2016-03-01

    The synthesis and crystallographic, thermodynamic, and transport properties of single crystalline Rh9In4S4 were studied. The resistivity, magnetization, and specific heat measurements all clearly indicate bulk superconductivity with a critical temperature, Tc˜ 2.25 K. The Sommerfeld coefficient γ and the Debye temperature (ΘD) were found to be 34 mJ mol-1 K-2 and 217 K, respectively. The observed specific heat jump, Δ C /γ Tc =1.66 , is larger than the expected BCS weak coupling value of 1.43. Ginzburg-Landau (GL) ratio of the low-temperature GL-penetration depth, λGL≈ 5750 Å, to the GL-coherence length, ξGL≈ 94 Å, is large: κ ˜ 60 . Furthermore, we observed a peak effect in the resistivity measurement as a function of both temperature and magnetic field.

  6. Asymmetry in the triplet 3p-4s Mg lines in cool DZ white dwarfs

    NASA Astrophysics Data System (ADS)

    Allard, N. F.; Leininger, T.; Gadéa, F. X.; Brousseau-Couture, V.; Dufour, P.

    2016-04-01

    The purpose of the present work is to make an exhaustive study of the line shape of the triplet 3p-4s Mg line (Mgb triplet), which is perturbed by He in the extreme physical conditions found in the cool atmosphere of DZ white dwarfs. This study is undertaken by inferring both a unified theory of spectral line broadening and ab initio potential energies. Cool white dwarfs require a specific treatment for line broadening owing to the high helium densities that are involved. Beyond the conventional symmetrical Lorentzian core at low density, we show that the line profiles are asymmetrical and have significant additional contributions on the short wavelength side. This blue asymmetry is a consequence of low maxima in the corresponding Mg-He potential energy difference curves at short and intermediate internuclear distances. The new profiles are shown to provide a good fit to an SDSS (Sloan Digital Sky Survey) observation.

  7. Validation of a plant dynamics code for 4S - Test analysis of natural circulation behavior

    SciTech Connect

    Sebe, F.; Horie, H.; Matsumiya, H.; Fanning, T. H.

    2012-07-01

    A plant transient dynamics code for a sodium-cooled fast reactor was developed by Toshiba. The code is used to evaluate the safety performance of Super-Safe, Small, and Simple reactor (4S) for Anticipated Operational Occurrences (AOOs), Design Basis Accident (DBA) and Beyond DBA (BDBA). The code is currently undergoing verification and validation (V and V). As one of the validation, test analysis of the Shutdown Heat Removal Test (SHRT)-17 performed in the Experimental Breeder Reactor (EBR)-II was conducted. The SHRT-17 is protected loss of flow test. The purpose of this validation is to confirm capability of the code to simulate natural circulation behavior of the plant. As a result, good agreements are shown between the analytical results and the measured data which were available from instrumented subassembly. The detailed validation result of the natural circulation behavior is described in this paper. (authors)

  8. Innovative hybrid vs polymeric nanocapsules: The influence of the cationic lipid coating on the "4S".

    PubMed

    Carbone, C; Manno, D; Serra, A; Musumeci, T; Pepe, V; Tisserand, C; Puglisi, G

    2016-05-01

    Polymeric and hybrid aqueous-core nanocapsules were prepared using a low energy organic-solvent free procedure as innovative nanodevices for the ophthalmic delivery of melatonin. In order to evaluate how different cationic lipids could affect the main properties of the nanodevices, we focused our attention on mean particles size, surface charge, shape and stability (the "4S"). The results of our study confirmed the hypothesis that the coating material differently affects the overall nanoparticles properties, above all in terms of morphology: in particular, the cationic lipid dimethyldioctadecylammonium bromide allows the formation of very stable well-defined nanocapsules with non-spherical shape with sustained and prolonged drug release, thus representing a great advantage in ophthalmic application. PMID:26895507

  9. The [4Fe-4S] cluster of quinolinate synthase from Escherichia coli: investigation of cluster ligands.

    PubMed

    Rousset, Carine; Fontecave, Marc; Ollagnier de Choudens, Sandrine

    2008-08-20

    Nicotinamide adenine dinucleotide (NAD) derives from quinolinic acid which is synthesized in Escherichia coli from l-aspartate and dihydroxyacetone phosphate through the concerted action of l-aspartate oxidase and the [4Fe-4S] quinolinate synthase (NadA). Here, we addressed the question of the identity of the cluster ligands. We performed in vivo complementation experiments as well as enzymatic, spectroscopic and structural in vitro studies using wild-type vs. Cys-to-Ala mutated NadA proteins. These studies reveal that only three cysteine residues, the conserved Cys113, Cys200 and Cys297, are ligands of the cluster. This result is in contrast to the previous proposal that pointed the three cysteines of the C(291)XXC(294)XXC(297) motif. Interestingly, we demonstrated that Cys291 and Cys294 form a disulfide bridge and are important for activity. PMID:18674537

  10. Superconducting and thermoelectric properties of new layered superconductor Bi4O4S3

    NASA Astrophysics Data System (ADS)

    Tan, S. G.; Li, L. J.; Liu, Y.; Tong, P.; Zhao, B. C.; Lu, W. J.; Sun, Y. P.

    2012-12-01

    Polycrystalline sample of the new layered superconductor Bi4O4S3 is successfully synthesized by solid-state reaction method by using Bi, S and Bi2O3 powders with one-step solid state reaction. The superconducting transition temperature (Tconset=4.5 K), the zero resistance transition temperature (Tc0 = 4.07 K) and the diamagnetic transition temperature (4.02 K at H = 10 Oe) were confirmed by electrical transport and magnetic measurements. Also, our results indicate a typical type II-superconductor behavior and the charge carriers are mainly electron-type. In addition, a large thermoelectric effect was observed with a dimensionless thermoelectric figure of merit (ZT) of about 0.03 at 300 K.

  11. Superconducting properties of Rh9In4S4 single crystals

    DOE PAGESBeta

    Kaluarachchi, Udhara S.; Lin, Qisheng; Xie, Weiwei; Taufour, Valentin; Bud'ko, Sergey L.; Miller, Gordon J.; Canfield, Paul C.

    2016-03-28

    The synthesis and crystallographic, thermodynamic, and transport properties of single crystalline Rh9In4S4 were studied. The resistivity, magnetization, and specific heat measurements all clearly indicate bulk superconductivity with a critical temperature, Tc~2.25 K. The Sommerfeld coefficient γ and the Debye temperature (ΘD) were found to be 34 mJ mol–1 K–2 and 217 K, respectively. The observed specific heat jump, ΔC/γTc=1.66, is larger than the expected BCS weak coupling value of 1.43. Ginzburg-Landau (GL) ratio of the low-temperature GL-penetration depth, λGL≈5750 Å, to the GL-coherence length, ξGL≈94 Å, is large: κ ~60. However, we observed a peak effect in the resistivity measurementmore » as a function of both temperature and magnetic field.« less

  12. Tumor-specific delivery of BSH-3R for boron neutron capture therapy and positron emission tomography imaging in a mouse brain tumor model.

    PubMed

    Iguchi, Yoshiya; Michiue, Hiroyuki; Kitamatsu, Mizuki; Hayashi, Yuri; Takenaka, Fumiaki; Nishiki, Tei-Ichi; Matsui, Hideki

    2015-07-01

    Glioblastoma, a malignant brain tumor with poor disease outcomes, is managed in modern medicine by multimodality therapy. Boron neutron capture therapy (BNCT) is an encouraging treatment under clinical investigation. In malignant cells, BNCT consists of two major factors: neutron radiation and boron uptake. To increase boron uptake in cells, we created a mercapto-closo-undecahydrododecaborate ([B12HnSH](2-)2Na(+), BSH) fused with a short arginine peptide (1R, 2R, 3R) and checked cellular uptake in vitro and in vivo. In a mouse brain tumor model, only BSH with at least three arginine domains could penetrate cell membranes of glioma cells in vitro and in vivo. Furthermore, to monitor the pharmacokinetic properties of these agents in vivo, we fused BSH and BSH-3R with 1,4,7,10-tetraazacyclododecane-1,4,7,10-tetraacetic acid (DOTA); DOTA is a metal chelating agent for labeling positron emission tomography (PET) probe with (64)Cu. We administered BSH-DOTA-(64)Cu and BSH-3R-DOTA-(64)Cu to the tumor model through a mouse tail vein and determined the drugs' pharmacokinetics by PET imaging. BSH-3R showed a high uptake in the tumor area on PET imaging. We concluded that BSH-3R is the ideal boron compound for clinical use during BNCT and that in developing this compound for clinical use, the BSH-3R PET probe is essential for pharmacokinetic imaging. PMID:25934274

  13. The Structure and Population Genetics of the Breakpoints Associated With the Cosmopolitan Chromosomal Inversion In(3R)Payne in Drosophila melanogaster

    PubMed Central

    Matzkin, Luciano M.; Merritt, Thomas J. S.; Zhu, Chen-Tseh; Eanes, Walter F.

    2005-01-01

    We report here the breakpoint structure and sequences of the Drosophila melanogaster cosmopolitan chromosomal inversion In(3R)P. Combining in situ hybridization to polytene chromosomes and long-range PCR, we have identified and sequenced the distal and proximal breakpoints. The breakpoints are not simple cut-and-paste structures; gene fragments and small duplications of DNA are associated with both breaks. The distal breakpoint breaks the tolkin (tok) gene and the proximal breakpoint breaks CG31279 and the tolloid (tld) gene. Functional copies of all three genes are found at the opposite breakpoints. We sequenced a representative sample of standard (St) and In(3R)P karyotypes for a 2-kb portion of the tok gene, as well as the same 2 kb from the pseudogene tok fragment found at the distal breakpoint of In(3R)P chromosomes. The tok gene in St arrangements possesses levels of polymorphism typical of D. melanogaster genes. The functional tok gene associated with In(3R)P shows little polymorphism. Numerous single-base changes, as well as deletions and duplications, are associated with the truncated copy of tok. The overall pattern of polymorphism is consistent with a recent origin of In(3R)P, on the order of Ne generations. The identification of these breakpoint sequences permits a simple PCR-based screen for In(3R)P.

  14. Single step transformation of sulphur to Li2S2/Li2S in Li-S batteries

    PubMed Central

    Helen, M.; Reddy, M. Anji; Diemant, Thomas; Golla-Schindler, Ute; Behm, R. Jürgen; Kaiser, Ute; Fichtner, Maximilian

    2015-01-01

    Lithium-sulphur batteries have generated tremendous research interest due to their high theoretical energy density and potential cost-effectiveness. The commercial realization of Li-S batteries is still hampered by reduced cycle life associated with the formation of electrolyte soluble higher-order polysulphide (Li2Sx, x = 4–8) intermediates, leading to capacity fading, self-discharge, and a multistep voltage profile. Herein, we have realized a practical approach towards a direct transformation of sulphur to Li2S2/Li2S in lithium-sulphur batteries by alteration of the reaction pathway. A coconut shell derived ultramicroporous carbon-sulphur composite cathode has been used as reaction directing template for the sulphur. The lithiation/delithiation and capacity fading mechanism of microporous carbon confined sulphur composite was revealed by analyzing the subsurface using X-ray photoelectron spectroscopy. No higher-order polysulphides were detected in the electrolyte, on the surface, and in the subsurface of the cathode composite. The altered reaction pathway is reflected by a single-step profile in the discharge/charge of a lithium-sulphur cell. PMID:26173723

  15. Single step transformation of sulphur to Li2S2/Li2S in Li-S batteries

    NASA Astrophysics Data System (ADS)

    Helen, M.; Reddy, M. Anji; Diemant, Thomas; Golla-Schindler, Ute; Behm, R. Jürgen; Kaiser, Ute; Fichtner, Maximilian

    2015-07-01

    Lithium-sulphur batteries have generated tremendous research interest due to their high theoretical energy density and potential cost-effectiveness. The commercial realization of Li-S batteries is still hampered by reduced cycle life associated with the formation of electrolyte soluble higher-order polysulphide (Li2Sx, x = 4-8) intermediates, leading to capacity fading, self-discharge, and a multistep voltage profile. Herein, we have realized a practical approach towards a direct transformation of sulphur to Li2S2/Li2S in lithium-sulphur batteries by alteration of the reaction pathway. A coconut shell derived ultramicroporous carbon-sulphur composite cathode has been used as reaction directing template for the sulphur. The lithiation/delithiation and capacity fading mechanism of microporous carbon confined sulphur composite was revealed by analyzing the subsurface using X-ray photoelectron spectroscopy. No higher-order polysulphides were detected in the electrolyte, on the surface, and in the subsurface of the cathode composite. The altered reaction pathway is reflected by a single-step profile in the discharge/charge of a lithium-sulphur cell.

  16. Single step transformation of sulphur to Li2S2/Li2S in Li-S batteries.

    PubMed

    Helen, M; Reddy, M Anji; Diemant, Thomas; Golla-Schindler, Ute; Behm, R Jürgen; Kaiser, Ute; Fichtner, Maximilian

    2015-01-01

    Lithium-sulphur batteries have generated tremendous research interest due to their high theoretical energy density and potential cost-effectiveness. The commercial realization of Li-S batteries is still hampered by reduced cycle life associated with the formation of electrolyte soluble higher-order polysulphide (Li2Sx, x = 4-8) intermediates, leading to capacity fading, self-discharge, and a multistep voltage profile. Herein, we have realized a practical approach towards a direct transformation of sulphur to Li2S2/Li2S in lithium-sulphur batteries by alteration of the reaction pathway. A coconut shell derived ultramicroporous carbon-sulphur composite cathode has been used as reaction directing template for the sulphur. The lithiation/delithiation and capacity fading mechanism of microporous carbon confined sulphur composite was revealed by analyzing the subsurface using X-ray photoelectron spectroscopy. No higher-order polysulphides were detected in the electrolyte, on the surface, and in the subsurface of the cathode composite. The altered reaction pathway is reflected by a single-step profile in the discharge/charge of a lithium-sulphur cell. PMID:26173723

  17. Phonon drag of electrons in Ag{sub 2}S

    SciTech Connect

    Aliev, S. A.; Aliev, F. F. Gasanov, Z. S.; Abdullayev, S. M.; Selim-zade, R. I.

    2010-06-15

    The temperature dependences of the heat-conductivity coefficient {chi} and the thermopower 6h of Ag{sub 2}S are investigated in the range of 4.2-300 K. It is found that the value of 6h sharply increases (6h {infinity} T{sup -3}) with decreasing T at T < 100 K and passes through a maximum at 16-18 K. The heat-conductivity coefficient passes through a maximum at {approx}30 K. The sharp increase in 6h is found to be caused by the effect of long-wavelength-phonon drag of electrons. It is shown that the shift of the 6h and {chi} peaks, as well as the temperature dependence of the phonon thermopower 6h{sub ph} {infinity} T{sup -3}, agrees with the Herring theory.

  18. Modification of polytetrafluoroethylene surfaces using H2S plasma treatment

    NASA Astrophysics Data System (ADS)

    Vesel, Alenka; Kovac, Janez; Zaplotnik, Rok; Modic, Martina; Mozetic, Miran

    2015-12-01

    A process for modifying the surface properties of polytetrafluoroethylene (PTFE) polymer using sulfur-containing gaseous plasma is presented in this paper. Samples of PTFE foils were treated in pure H2S gaseous plasma sustained by an electrode-less radio-frequency discharge in the E-mode. The samples were kept at a floating potential. X-ray photoelectron spectroscopy, secondary ion mass spectrometry and atomic force microscopy were used to determine the evolution of the surface functionalities and morphology. An extremely thin film of chemically bonded sulfur was formed on the surface after a few seconds of plasma treatment, whereas a treatment duration of more than a minute resulted in the deposition of pure sulfur. The deposited film remained as thin as a few nanometers, even after half an hour of treatment.

  19. Phase equilibria in the quasiternary system Ag2S-Ga2S3-In2S3 and optical properties of (Ga55In45)2S300, (Ga54.59In44.66Er0.75)2S300 single crystals

    NASA Astrophysics Data System (ADS)

    Ivashchenko, I. A.; Danyliuk, I. V.; Olekseyuk, I. D.; Pankevych, V. Z.; Halyan, V. V.

    2015-07-01

    The quasiternary system Ag2S-Ga2S3-In2S3 was investigated by differential thermal, X-ray diffraction analyses. The phase diagram of the Ga2S3-In2S3 system and nine polythermal sections, isothermal section at 820 K and the liquidus surface projection were constructed. The existence of the large solid solutions ranges of binary and ternary compounds was established. The range of the existence of the quaternary phase AgGaxIn5-xS8 (2.25≤x≤2.85) at 820 K was determined. The single crystals (Ga55In45)2S300 and (Ga54.59In44.66Er0.75)2S300 were grown by a directional crystallization method from solution-melt. Optical absorption spectra in the 500-1600 nm range were recorded. The luminescence of the (Ga54.59In44.66Er0.75)2S300 single crystal shows a maximum at 1530 nm for the excitation wavelengths of 532 and 980 nm at 80 and 300 K.

  20. A Large-scale Relativistic Configuration-interaction Approach: Application to the 4s2 - 4s4p Transition Energies and E1 Rates for Zn-like Ions

    SciTech Connect

    Chen, M H; Cheng, K T

    2009-08-28

    Relativistic configuration-interaction calculations of the 4s4p excitation energies and 4s{sup 2} - 4s4p E1 transitions for Zn-like ions from Z = 30 to 92 are shown. B-spline basis functions are used for these large-scale calculations. QED corrections to the excitation energies are also calculated. Results are in good agreement with other theories and with experiment, and demonstrate the utility of this method for high-precision atomic structure calculations not just for few-electron systems but also for large atomic systems such as Zn-like ions along the entire isoelectronic sequence.

  1. Performance optimization of all-solid-state lithium ion batteries using a Li2S-P2S5 solid electrolyte and LiCoO2 cathode

    NASA Astrophysics Data System (ADS)

    Kim, Junghoon; Eom, Minyong; Noh, Sungwoo; Shin, Dongwook

    2012-04-01

    In order to improve the performance of all-solid-state batteries, 78Li2S·22P2S5 glass-ceramics with an enhanced ionic conductivity of 8.5×10-4 S cm-1 were developed using a two-step heat treatment after mechanical milling. The two-step heat treatment process consists of a nucleation step at 160°C and a crystal growth step at 230°C, where the nucleation temperature was determined using previously performed thermal analyses. Moreover, the wet mixing method, which is identified as an effective method of obtaining more homogeneous distributions of composite particles, was applied in order to prepare the composite cathode. As a result, the cell prepared using the wet mixing method exhibited significantly improved capacity retention.

  2. The H2S Donor NaHS Changes the Expression Pattern of H2S-Producing Enzymes after Myocardial Infarction.

    PubMed

    Li, Na; Wang, Ming-Jie; Jin, Sheng; Bai, Ya-Dan; Hou, Cui-Lan; Ma, Fen-Fen; Li, Xing-Hui; Zhu, Yi-Chun

    2016-01-01

    Aims. To examine the expression patterns of hydrogen sulphide- (H2S-) producing enzymes in ischaemic heart tissue and plasma levels of H2S after 2 weeks of NaHS treatment after myocardial infarction (MI) and to clarify the role of endogenous H2S in the MI process. Results. After MI surgery, 2 weeks of treatment with the H2S donor NaHS alleviated ischaemic injury. Meanwhile, in ischemia myocardium, three H2S-producing enzymes, cystathionine γ-lyase (CSE), cystathionine-β-synthase (CBS), and 3-mercaptopyruvate sulfurtransferase (3-MST) significantly increased. Plasma H2S levels were also elevated. In vitro, NaHS treatment protected cardiomyocytes from hypoxic injury and raised CBS levels in a concentration-dependent manner. Different from in vivo results, however, CSE or 3-MST expression did not change. NaHS treatment increased the activity of CSE/CBS but not of 3-MST. When CSE was either knocked down (in vitro) or knocked out (in vivo), H2S levels significantly decreased, which subsequently exacerbated the ischaemic injury. Meanwhile, the expressions of CBS and 3-MST increased due to compensation. Conclusions. Exogenous H2S treatment changed the expressions of three H2S-producing enzymes and H2S levels after MI, suggesting a new and indirect regulatory mechanism for H2S production and its contribution to cardiac protection. Endogenous H2S plays an important role in protecting ischaemic tissue after MI. PMID:27057284

  3. The CaV2.3 R-Type Voltage-Gated Ca2+ Channel in Mouse Sleep Architecture

    PubMed Central

    Siwek, Magdalena Elisabeth; Müller, Ralf; Henseler, Christina; Broich, Karl; Papazoglou, Anna; Weiergräber, Marco

    2014-01-01

    Study Objectives: Voltage-gated Ca2+ channels (VGCCs) are key elements in mediating thalamocortical rhythmicity. Low-voltage activated (LVA) CaV 3 T-type Ca2+ channels have been related to thalamic rebound burst firing and to generation of non-rapid eye movement (NREM) sleep. High-voltage activated (HVA) CaV 1 L-type Ca2+ channels, on the opposite, favor the tonic mode of action associated with higher levels of vigilance. However, the role of the HVA Non-L-type CaV2.3 Ca2+ channels, which are predominantly expressed in the reticular thalamic nucleus (RTN), still remains unclear. Recently, CaV2.3−/− mice were reported to exhibit altered spike-wave discharge (SWD)/absence seizure susceptibility supported by the observation that CaV2.3 mediated Ca2+ influx into RTN neurons can trigger small-conductance Ca2+-activated K+-channel type 2 (SK2) currents capable of maintaining thalamic burst activity. Based on these studies we investigated the role of CaV2.3 R-type Ca2+ channels in rodent sleep. Methods: The role of CaV2.3 Ca2+ channels was analyzed in CaV2.3−/− mice and controls in both spontaneous and artificial urethane-induced sleep, using implantable video-EEG radiotelemetry. Data were analyzed for alterations in sleep architecture using sleep staging software and time-frequency analysis. Results: CaV2.3 deficient mice exhibited reduced wake duration and increased slow-wave sleep (SWS). Whereas mean sleep stage durations remained unchanged, the total number of SWS epochs was increased in CaV2.3−/− mice. Additional changes were observed for sleep stage transitions and EEG amplitudes. Furthermore, urethane-induced SWS mimicked spontaneous sleep results obtained from CaV2.3 deficient mice. Quantitative Real-time PCR did not reveal changes in thalamic CaV3 T-type Ca2+ channel expression. The detailed mechanisms of SWS increase in CaV2.3−/− mice remain to be determined. Conclusions: Low-voltage activated CaV2.3 R-type Ca2+ channels in the thalamocortical

  4. Transmission electron microscopy study of the MgS–Tm{sub 2}S{sub 3} system

    SciTech Connect

    Varadé-López, R.; Ávila-Brande, D.; Urones-Garrote, E.; Otero-Díaz, L.C.

    2015-09-15

    This work presents the structural–microstructural characterization of the NaCl-derivative MgS–Tm{sub 2}S{sub 3} system, which can be formulated by the expression Mg{sub (1−x)}Tm{sub (2/3)x}□{sub (1/3)x}S (□→cation vacancy). Transmission electron microscopy observations show the transition between NaCl-type and spinel-type structures when 0 ≤x≤ 0.75. The increase of Tm content in the solid solution provokes the increase of the spinel-type phase proportion, which intergrows with the NaCl-type crystals. When x≥0.75, some phases derived from NaCl-type structure through the chemical twinning at the unit cell level crystallographic operation are observed, such as CT-MgTm{sub 2}S{sub 4} and CT-MgTm{sub 4}S{sub 7}. The existence and nature of the extended defects observed along the c direction of these structures are characterized by means of Scanning-Transmission electron microscopy high-angle dark field imaging, which allows observing the presence of quasi ordered crystals with new possible complex stoichiometries at atomic resolution. - Graphical abstract: HAADF-STEM image of a disordered CT-MgYb{sub 2}S{sub 4} crystal. The disordered twin-slab sequences are marked by arrows. - Highlights: • Structural evolution of the Mg{sub (1−x)}Tm{sub (2/3)x}□{sub (1/3)x}S system was characterized by means of TEM. • The increase in Tm content provokes the transition from NaCl to spinel-type structure up to x=0.75. • Chemical twinned phases CT-MgTm{sub 2}S{sub 4} and CT-MgTm{sub 4}S{sub 7} are observed at high Tm contents. • Extended defects in CT-crystals are characterized with atomic resolution STEM-HAADF images.

  5. Ab initio quantum chemical investigation of arsenic sulfide molecular diversity from As4S6 and As4

    NASA Astrophysics Data System (ADS)

    Kyono, Atsushi

    2013-10-01

    The structural diversity of arsenic sulfide molecules in compositions between As4S6 and As4 was investigated using ab initio quantum chemical calculations. The As4S6 molecule consists of four trigonal pyramid coordinations of As atoms bonding to three S atoms. In the As4S5 composition, only one type of molecular configuration corresponds to an uzonite-type molecule. In the As4S4 composition, two molecular configurations exist with realgar-type and pararealgar-type molecules. Three molecular configurations are in the As4S3 composition. The first configuration comprises trigonal pyramidal As atom coordinations of two types: bonding to two S atoms and one As atom, and bonding to one S atom and two As atoms. The second is the molecular configuration of dimorphite. The third comprises trigonal pyramidal As atom coordinations of two types: bonding to three As atoms, and bonding to one As atom and two S atoms. The As4S2 composition allows molecular configurations of two types. One is comprised of trigonal pyramidal As atom configurations of one type bonding to two As atoms and one S atom. The other comprises trigonal pyramidal As atom coordinations of three types: bonding to two S atoms and one As atoms, bonding to one S atom and two As atoms, and bonding to three As atoms. The As4S molecule has trigonal pyramidal As atom coordinations of two types: bonding to one S atom and two As atoms, and bonding to three As atoms. The As4S composition permits only one molecular configuration, which suggests that the mineral duranusite comprises the As4S molecular geometry. In all, ten molecular configurations are predicted in the molecular hierarchy of the arsenic sulfide binary system. The simulated Raman spectral profiles are helpful in searching for undiscovered arsenic sulfide minerals.

  6. Glass structure and electrical conductivity in (As2S3 1-x (Ag2S)x

    NASA Astrophysics Data System (ADS)

    Holbrook, C.; Chen, P.; Novita, D.; Boolchand, P.

    2006-03-01

    We have synthesized titled glasses in the 0 < x < 0.16 range, and have examined them in modulated DSC experiments. The starting materials, As2S3 and Ag2S lumps, were reacted in evacuated fused quartz tubings, and glasses synthesized by water-quench of homogenized melts. Thermal measurements used a TA instruments model 2920 operated at 3 C/min scan rate and 1 C/100s modulation rate. Preliminary results reveal a single glass transition in the 0 < x < 0.05 range, which steadily decrease from a value of 210 C at x = 0 to 182 C near x = 0.05. In contrast, bimodal glass transitions are observed at x > 0.09, with one Tg(1) near 167 C and the second, Tg(2) near 186 C, and with the endotherm associated with Tg(1) steadily increasing with x. Non-reversing enthalpies associated with Tgs are found to steadily decrease in the 0 < x < 0.09 range, to nearly vanish in the 0.10 < x < 0.12 range and to increase thereafter ( x > 0.12).These findings suggest that glasses at low x ( < 0.09) are Stressed- rigid, those at x > 0.12 Floppy while those in between in the Intermediate phase^1. The present results correlate well with earlier^2 electrical conductivity results in suggesting the possibility of an elastic origin to the conductivity thresholds in solid electrolyte glasses. 1. P. Boolchand, D.Georgiev and B. Goodman, J.Opto & Adm. Mater. 3, 703 (2001). 2. E.A. Kazakova and Z.U.Borisova, Fiz. Khim.Stekla 6, 424(1980).

  7. Measurement of the ratio fracl B(Υ(4S)arrow B^+B^-)l B(Υ(4S)arrow B^0 barB^0)

    NASA Astrophysics Data System (ADS)

    Hadavand, Haleh

    2003-04-01

    The ratio R^+/0=fracl B(Υ(4S) arrow B^+B^-)l B(Υ(4S) arrow B^0 barB^0) is measured with fully reconstructed candidates for B^± arrow J/ψ K^± and B^0 arrow J/ψ K^0S decays. Results are based on a data sample collected with the BaBar detector from 1999 to 2002.

  8. Strong-coupling phonon-mediated scenario of superconductivity in C a3I r4S n13 and C a3(Ir0.91Co0.09) 4S n13

    NASA Astrophysics Data System (ADS)

    Hou, Jianqiang; Wong, Chi Ho; Lortz, Rolf; Sibille, Romain; Kenzelmann, Michel

    2016-04-01

    We report measurements of the specific heat and electrical resistivity of C a3(Ir0.91Co0.09) 4S n13 in comparison to C a3I r4S n13 . The Co substitution was chosen to suppress the structural anomaly T*=38 K reported in C a3I r4S n13 . While the superconducting transition temperature of C a3(Ir0.91Co0.09) 4S n13 is slightly higher than in the stoichiometric parent compound C a3I r4S n13 , and it displays a stronger superconducting coupling strength, the absence of a structural phase transition allows us to determine the spectral distribution of phonon states and its relation to superconductivity. The phonon density of states F (ω) and the spectral electron-phonon scattering function atr 2F (ω ) are determined by deconvolution of the specific heat and electrical resistivity, respectively. A dominant mode appears in both histograms at ℏ ω =12 meV , which indicates that this phonon mode is responsible for the superconductivity in C a3(Ir0.91Co0.09) 4S n13 . The data suggest that superconductivity in this material class can be conclusively explained within a conventional strong -coupling phonon-mediated scenario.

  9. Growth rate controlled synthesis of hierarchical Bi2S3/In2S3 core/shell microspheres with enhanced photocatalytic activity

    NASA Astrophysics Data System (ADS)

    Zhou, Juan; Tian, Guohui; Chen, Yajie; Shi, Yunhan; Tian, Chungui; Pan, Kai; Fu, Honggang

    2014-02-01

    Core/shell heterostructure composite has great potential applications in photocatalytic field because the introduction of core can remarkably improve charge transport and enhance the electron-hole separation. Herein, hierarchical Bi2S3/In2S3 core/shell structured microspheres were prepared via a simple one-pot hydrothermal process based on different growth rate of the two kinds of sulphides. The results showed that, the as-prepared hierarchical Bi2S3/In2S3 core/shell heterostructure exhibits significant visible light photocatalytic activity for degradation of 2, 4-dichlorophenol. The introduction of Bi2S3 core can not only improve charge transport and enhance the electron-hole separation, but also broaden the visible light response. The hierarchical porous folwer-like shell of In2S3 could increase the specific surface area and remarkably enhanced the chemical stability of Bi2S3 against oxidation.

  10. Growth rate controlled synthesis of hierarchical Bi2S3/In2S3 core/shell microspheres with enhanced photocatalytic activity

    PubMed Central

    Zhou, Juan; Tian, Guohui; Chen, Yajie; Shi, Yunhan; Tian, Chungui; Pan, Kai; Fu, Honggang

    2014-01-01

    Core/shell heterostructure composite has great potential applications in photocatalytic field because the introduction of core can remarkably improve charge transport and enhance the electron-hole separation. Herein, hierarchical Bi2S3/In2S3 core/shell structured microspheres were prepared via a simple one-pot hydrothermal process based on different growth rate of the two kinds of sulphides. The results showed that, the as-prepared hierarchical Bi2S3/In2S3 core/shell heterostructure exhibits significant visible light photocatalytic activity for degradation of 2, 4-dichlorophenol. The introduction of Bi2S3 core can not only improve charge transport and enhance the electron-hole separation, but also broaden the visible light response. The hierarchical porous folwer-like shell of In2S3 could increase the specific surface area and remarkably enhanced the chemical stability of Bi2S3 against oxidation. PMID:24504084

  11. Investigation of hyperfine interactions in RMO3 (R =La, Nd; M =Cr, Fe) antiferromagnetic perovskite oxides using PAC spectroscopy

    NASA Astrophysics Data System (ADS)

    Carbonari, A. W.; Cavalcante, F. H. M.; Junqueira, A. C.; Leite, D. M. T.; Saxena, R. N.; Mestnik-Filho, J.

    The local magnetic interaction at the transition metal sites in RMO3 (R=La, Nd; M=Cr, Fe) compounds has been investigated by perturbed angular correlation (PAC) technique using 181Hf→181Ta probe nuclei. The present measurements cover a temperature range from 10 K to 1000 K. Above the respective Neel temperature, each compound shows a unique quadrupolar frequency that decreases linearly with temperature. These interactions were assigned to the radioactive probe substituting Cr or Fe sites. Below TN, a combined electric plus magnetic hyperfine interaction was observed. The magnetic interaction revealed that the super transferred hyperfine fields on 181Ta at the Cr sites in (La,Nd)CrO3 extrapolated to 0 K, are much smaller than the corresponding values at Fe sites in (La,Nd)FeO3. This difference was attributed to different distribution of d electrons in Cr3+ (3d3) and Fe3+ (3d5) ions in each compound. As the fields for Nd compounds are smaller than those for La compounds, the role of rare-earth ions in the magnetism of these oxides is also discussed.

  12. Investigation of hyperfine interactions in RMO 3 (R = La, Nd; M = Cr, Fe) antiferromagnetic perovskite oxides using PAC spectroscopy

    NASA Astrophysics Data System (ADS)

    Carbonari, A. W.; Cavalcante, F. H. M.; Junqueira, A. C.; Leite, D. M. T.; Saxena, R. N.; Mestnik-Filho, J.

    2007-07-01

    The local magnetic interaction at the transition metal sites in RMO3 (R = La, Nd; M = Cr, Fe) compounds has been investigated by perturbed angular correlation (PAC) technique using 181Hf→181Ta probe nuclei. The present measurements cover a temperature range from 10 K to 1000 K. Above the respective Néel temperature, each compound shows a unique quadrupolar frequency that decreases linearly with temperature. These interactions were assigned to the radioactive probe substituting Cr or Fe sites. Below T N , a combined electric plus magnetic hyperfine interaction was observed. The magnetic interaction revealed that the super transferred hyperfine fields on 181Ta at the Cr sites in (La,Nd)CrO3 extrapolated to 0 K, are much smaller than the corresponding values at Fe sites in (La,Nd)FeO3. This difference was attributed to different distribution of d electrons in Cr3 + (3d3) and Fe3 + (3d5) ions in each compound. As the fields for Nd compounds are smaller than those for La compounds, the role of rare-earth ions in the magnetism of these oxides is also discussed.

  13. Adsorption study of copper phthalocyanine on Si(111)(√3 × √3)R30°Ag surface

    NASA Astrophysics Data System (ADS)

    Menzli, S.; Ben Hamada, B.; Arbi, I.; Souissi, A.; Laribi, A.; Akremi, A.; Chefi, C.

    2016-04-01

    The adsorption of copper phthalocyanine (CuPc) molecules on Si(111)(√3 × √3)R30°Ag surface is studied at room temperature under ultra high vacuum. Crystallographic, chemical and electronic properties of the interface are investigated by low energy electron diffraction (LEED), ultraviolet and X-ray photoemission spectroscopies (UPS, XPS) and X-ray photoemission diffraction (XPD). LEED and XPD results indicate that after one monolayer deposition the molecular layer is highly ordered with a flat lying adsorption configuration. The corresponding pattern reveals the coexistence of three symmetrically equivalent orientations of molecules with respect to the substrate. XPS core level spectra of the substrate reveal that there is no discernible chemical interaction between molecules and substrate; however there is evidence of Fermi level movement. During the growth, the work function was found to decrease from 4.90 eV for the clean substrate to 4.35 eV for the highest coverage (60 monolayers). Within a thickness of two monolayer deposition an interface dipole of 0.35 eV and a band bending of 0.2 eV have been found. UPS spectra indicate the existence of a band bending of the highest occupied molecular orbital (HOMO) of 0.55 eV. The changes in the work function, in the Fermi level position and in the HOMO state have been used to determine the energy level alignment at the interface.

  14. Drosophila larval to pupal switch under nutrient stress requires IP3R/Ca2+ signalling in glutamatergic interneurons

    PubMed Central

    Jayakumar, Siddharth; Richhariya, Shlesha; Reddy, O Venkateswara; Texada, Michael J; Hasan, Gaiti

    2016-01-01

    Neuronal circuits are known to integrate nutritional information, but the identity of the circuit components is not completely understood. Amino acids are a class of nutrients that are vital for the growth and function of an organism. Here, we report a neuronal circuit that allows Drosophila larvae to overcome amino acid deprivation and pupariate. We find that nutrient stress is sensed by the class IV multidendritic cholinergic neurons. Through live calcium imaging experiments, we show that these cholinergic stimuli are conveyed to glutamatergic neurons in the ventral ganglion through mAChR. We further show that IP3R-dependent calcium transients in the glutamatergic neurons convey this signal to downstream medial neurosecretory cells (mNSCs). The circuit ultimately converges at the ring gland and regulates expression of ecdysteroid biosynthetic genes. Activity in this circuit is thus likely to be an adaptation that provides a layer of regulation to help surpass nutritional stress during development. DOI: http://dx.doi.org/10.7554/eLife.17495.001 PMID:27494275

  15. A neutron powder diffraction study of ND 3 intercalated titanium disulfide, 3 R-TiS 2ND 3

    NASA Astrophysics Data System (ADS)

    Bouwmeester, H. J. M.; Wiegers, G. A.

    1988-10-01

    Neutron powder diffraction of rhombohedral 3 R-TiS 2ND 3 ( a = 3.419 Å, c = 27.03 Å at 300 K, space group R overline3m ) has shown that ND 3 molecules and ND +4 ions, present in a ratio of about 5 to 1 from chemical and physical evidence, occupy statistically the trigonal-prismatic holes between TiS 2 sandwiches. One cannot distinguish between ND 3 and ND +4. Powder intensities calculated for a model with spherically symmetric ND 3 molecules (corresponding to isotropically rotating ND 3 and ND +4) in the trigonal-prismatic holes were in reasonable agreement with the observed intensities. Attempts to obtain information on the precise orientation of ND 3 and ND +4 in the TiS 2 lattice using refinements with structure factors were not successful; the reliability R factor was 0.093 for spherical symmetric ND 3 molecules with nitrogen in the center of the trigonal-prismatic holes.

  16. Simultaneous noncontact AFM and STM of Ag:Si(111)-(3×3)R30∘

    NASA Astrophysics Data System (ADS)

    Sweetman, Adam; Stannard, Andrew; Sugimoto, Yoshiaki; Abe, Masayuki; Morita, Seizo; Moriarty, Philip

    2013-02-01

    The Ag:Si(111)-(3×3)R30∘ surface structure has attracted considerable debate concerning interpretation of scanning tunneling microscope (STM) and noncontact atomic force microscope (NC-AFM) images. In particular, the accepted interpretation of atomic resolution images in NC-AFM has been questioned by theoretical and STM studies. In this paper, we use combined NC-AFM and STM to conclusively show that the inequivalent trimer (IET) configuration best describes the surface ground state. Thermal-averaging effects result in a honeycomb-chained-trimer (HCT) appearance at room temperature, in contrast to studies suggesting that the IET configuration remains stable at higher temperatures [Zhang, Gustafsson, and Johansson, Phys. Rev. BPRBMDO1098-012110.1103/PhysRevB.74.201304 74, 201304(R) (2006) and J. Phys.: Conf. Ser.1742-658810.1088/1742-6596/61/1/264 61, 1336 (2007)]. We also comment on results obtained at an intermediate temperature that suggest an intriguing difference between the imaging mechanisms of NC-AFM and STM on structurally fluctuating samples.

  17. High temperature regenerative H.sub.2 S sorbents

    NASA Technical Reports Server (NTRS)

    Flytani-Stephanopoulos, Maria (Inventor); Gavalas, George R. (Inventor); Tamhankar, Satish S. (Inventor)

    1988-01-01

    Efficient, regenerable sorbents for removal of H.sub.2 S from high temperature gas streams comprise porous, high surface area particles. A first class of sorbents comprise a thin film of binary oxides that form a eutectic at the temperature of the gas stream coated onto a porous, high surface area refractory support. The binary oxides are a mixture of a Group VB or VIB metal oxide with a Group IB, IIB or VIII metal oxide such as a film of V-Zn-O, V-Cu-O, Cu-Mo-O, Zn-Mo-O or Fe-Mo-O coated on an alumina support. A second class of sorbents consist of particles of unsupported mixed oxides in the form of highly dispersed solid solutions of solid compounds characterized by small crystallite size, high porosity and relatively high surface area. The mixed oxide sorbents contain one Group IB, IIB or VIIB metal oxide such as copper, zinc or manganese and one or more oxides of Groups IIIA, VIB or VII such as aluminum, iron or molybdenum. The presence of iron or aluminum maintains the Group IB, IIB or VIIB metal in its oxidized state. Presence of molybdenum results in eutectic formation at sulfidation temperature and improves the efficiency of the sorbent.

  18. Non-BCS thermodynamic properties of H2 S superconductor

    NASA Astrophysics Data System (ADS)

    Durajski, Artur P.; Szcze&şacute; niak, Radosław; Li, Yinwei

    2015-08-01

    The present paper determines the thermodynamic properties of the superconducting state in the H2S compound. The values of the pressure from 130 GPa to 180 GPa were taken into consideration. The calculations were performed in the framework of the Eliashberg formalism. In the first step, the experimental course of the dependence of the critical temperature on the pressure was reproduced: TC ∈ < 31, 88 > K, whereas the Coulomb pseudopotential equal to 0.15 was adopted. Next, the following quantities were calculated: the order parameter at the temperature of zero Kelvin (Δ (0)), the specific heat jump at the critical temperature (ΔC (TC) ≡CS (TC) -CN (TC)), and the thermodynamic critical field (HC (0)). It was found that the values of the dimensionless ratios: RΔ ≡ 2 Δ (0) /kBTC , RC ≡ ΔC(TC) /CN (TC) , and RH ≡TCCN (TC) / HC2(0) deviate from the predictions of the BCS theory: RΔ ∈ < 3.64, 4.16 > , RC ∈ < 1.59, 2.24 > , and RH ∈ < 0.144, 0.163 > . Generalizing the results on the whole family of the HnS -type compounds, it was shown that the maximum value of the critical temperature can be equal to ˜290 K, while RΔ,RC and RH adopt the following values: 6.53, 3.99, and 0.093, respectively.

  19. The Dellistrique 2S - A 200 Channel Streak Camera

    NASA Astrophysics Data System (ADS)

    Majumdar, S.

    1985-02-01

    Despite a great deal of effort to improve time resolution of streak cameras, the best reported time resolution remained just under one picosecond for more than a decade. However, the sensitivity and resolution of these devices have improved substantially over this time. In this paper the design of a very high performance streak camera, capable of resolving one picosecond on 200 parallel channels with single photo-electron detection capability: the Dellistrique 2S. The system comprises of a streak tube type Picotron 200 with a photocathode resolving 200 spatial channels along a slit and with an extraction field near the photocathode of greater than 16 KV per cm and with a non saturating phosphor screen as the main component. There is post streak tube intensification of 30,000 at the streak tube output wavelength which increases both the sensitivity of the system. The intensifier is coupled to a CCD readout device fibre-optically for producing a two dimensional image with a dynamic range of greater than 500. The camera can be operated at a repetition rate of between 80 MHz and 240 MHz using R.F. scanning methods. Upto 20 parallel channels have been tried with parallel information recording, which is well below the tube's capability of recording 200 independent channels. The image is virtually distortion free across the whole usable screen length of 45 mm for a large screen tube.

  20. Lipid transfer proteins and 2S albumins as allergens.

    PubMed

    Pastorello, E A; Pompei, C; Pravettoni, V; Brenna, O; Farioli, L; Trambaioli, C; Conti, A

    2001-01-01

    Plant lipid transfer proteins, a widespread family of proteins, have been recently identified as important food allergens. Their common structural features, such as eight conserved cysteines forming disulfide bridges, basic isoelectric point and high similarity in amino acid sequence, are the basis of allergic clinical cross-reactivity. This has been demonstrated for the LTP allergens of the Prunoideae subfamily, whose similarity is about 95% as demonstrated for the purified allergens of peach, apricot, plum and apple. A relevant aspect is the existence of sequence homology of LTPs of botanically unrelated foods, as demonstrated for LTPs of maize and peach. A class of food allergens of well recognized clinical importance is that of seed storage 2S albumins. They have been identified in the most diffused edible seeds and nuts, such as mustard, sesame, Brazil nut, walnut and peanut. In particular, a strong correlation between IgE-binding to these proteins and food-induced anaphylaxis has been demonstrated for Brazil nut and sesame seeds. PMID:11298008

  1. Extending the Family of V(4+) S=(1/2) Kagome Antiferromagnets.

    PubMed

    Clark, Lucy; Aidoudi, Farida H; Black, Cameron; Arachchige, Kasun S A; Slawin, Alexandra M Z; Morris, Russell E; Lightfoot, Philip

    2015-12-14

    The ionothermal synthesis, structure, and magnetic susceptibility of a novel inorganic-organic hybrid material, imidazolium vanadium(III,IV) oxyfluoride [C3 H5 N2 ][V9 O6 F24 (H2 O)2 ] (ImVOF) are presented. The structure consists of inorganic vanadium oxyfluoride slabs with kagome layers of V(4+) S=${{ 1/2 }}$ ions separated by a mixed valence layer. These inorganic slabs are intercalated with imidazolium cations. Quinuclidinium (Q) and pyrazinium (Pyz) cations can also be incorporated into the hybrid structure type to give QVOF and PyzVOF analogues, respectively. The highly frustrated topology of the inorganic slabs, along with the quantum nature of the magnetism associated with V(4+) , means that these materials are excellent candidates to host exotic magnetic ground states, such as the highly sought quantum spin liquid. Magnetic susceptibility measurements of all samples suggest an absence of conventional long-range magnetic order down to 2 K despite considerable antiferromagnetic exchange. PMID:26515792

  2. Structural principles for computational and de novo design of 4Fe-4S metalloproteins.

    PubMed

    Nanda, Vikas; Senn, Stefan; Pike, Douglas H; Rodriguez-Granillo, Agustina; Hansen, Will A; Khare, Sagar D; Noy, Dror

    2016-05-01

    Iron-sulfur centers in metalloproteins can access multiple oxidation states over a broad range of potentials, allowing them to participate in a variety of electron transfer reactions and serving as catalysts for high-energy redox processes. The nitrogenase FeMoCO cluster converts di-nitrogen to ammonia in an eight-electron transfer step. The 2(Fe4S4) containing bacterial ferredoxin is an evolutionarily ancient metalloprotein fold and is thought to be a primordial progenitor of extant oxidoreductases. Controlling chemical transformations mediated by iron-sulfur centers such as nitrogen fixation, hydrogen production as well as electron transfer reactions involved in photosynthesis are of tremendous importance for sustainable chemistry and energy production initiatives. As such, there is significant interest in the design of iron-sulfur proteins as minimal models to gain fundamental understanding of complex natural systems and as lead-molecules for industrial and energy applications. Herein, we discuss salient structural characteristics of natural iron-sulfur proteins and how they guide principles for design. Model structures of past designs are analyzed in the context of these principles and potential directions for enhanced designs are presented, and new areas of iron-sulfur protein design are proposed. This article is part of a Special issue entitled Biodesign for Bioenergetics - the design and engineering of electronic transfer cofactors, protein networks, edited by Ronald L. Koder and J.L Ross Anderson. PMID:26449207

  3. On the Fermi-GBM Event 0.4 s after GW150914

    NASA Astrophysics Data System (ADS)

    Greiner, J.; Burgess, J. M.; Savchenko, V.; Yu, H.-F.

    2016-08-01

    In view of the recent report by Connaughton et al., we analyze continuous time-tagged event (TTE) data of Fermi-gamma-ray burst monitor (GBM) around the time of the gravitational-wave event GW 150914. We find that after proper accounting for low-count statistics, the GBM transient event at 0.4 s after GW 150914 is likely not due to an astrophysical source, but consistent with a background fluctuation, removing the tension between the INTEGRAL/ACS non-detection and GBM. Additionally, reanalysis of other short GRBs shows that without proper statistical modeling the fluence of faint events is over-predicted, as verified for some joint GBM–ACS detections of short GRBs. We detail the statistical procedure to correct these biases. As a result, faint short GRBs, verified by ACS detections, with significances in the broadband light curve even smaller than that of the GBM–GW150914 event are recovered as proper non-zero source, while the GBM–GW150914 event is consistent with zero fluence.

  4. A Nonradioactive Assay to Measure Production and Processing of Ribosomal RNA by 4sU-Tagging.

    PubMed

    Burger, Kaspar; Eick, Dirk

    2016-01-01

    In vivo metabolic pulse labeling is a classical approach to assess production and processing of ribosomal RNA (rRNA). However, conventional labeling techniques can be indirect and require work with radioactivity. Here, we describe in detail a protocol for in vivo metabolic labeling, purification, and readout of nascent rRNA by 4-thiouridine (4sU). We propose 4sU labeling as standard nonradioactive technique for the analysis of rRNA metabolism during ribosome biogenesis. PMID:27576715

  5. Requirement of IP3 receptor 3 (IP3R3) in nitric oxide induced cardiomyocyte differentiation of mouse embryonic stem cells.

    PubMed

    Wei, Wenjie; Huang, Wei; Yue, Jianbo

    2016-08-01

    Nitric oxide (NO) markedly induces cardiomyocyte (CM) differentiation of embryonic stem (ES) cells. Here we examined the role of the Ca(2+) signaling in the NO-induced CM differentiation of mouse ES cells. We found that NO induced intracellular Ca(2+) increases in ES cells in a dose-dependent manner, and application of IP3 pathway antagonists not only significantly inhibited this induced Ca(2+) increase but also abolished NO-induced CM differentiation of ES cells. Subsequently, all 3 types of inositol 1, 4, 5-trisphosphate (IP3) receptors (IP3Rs) in mouse ES cells were individually or triply knocked down. Interestingly, only knockdown of type 3 IP3R (IP3R3) or triple-knockdown of three types of IP3Rs significantly inhibited the NO-induced Ca(2+) increases. Consistently, IP3R3 knockdown blocked the NO-induced CM differentiation of ES cells. CMs derived from IP3R3 knockdown ES cells also showed both structural and functional defects. In summary, our results indicate that the IP3R3-Ca(2+) pathway is required for NO-induced CM differentiation of ES cells. PMID:27349290

  6. H2S concentrations in the arterial blood during H2S administration in relation to its toxicity and effects on breathing

    PubMed Central

    Klingerman, Candice M.; Trushin, Neil; Prokopczyk, Bogdan

    2013-01-01

    Our aim was to establish in spontaneously breathing urethane-anesthetized rats, the relationship between the concentrations of H2S transported in the blood and the corresponding clinical manifestations, i.e., breathing stimulation and inhibition, during and following infusion of NaHS at increasing rates. The gaseous concentration of H2S (CgH2S, one-third of the total soluble form) was computed from the continuous determination of H2S partial pressure in the alveolar gas, while H2S, both dissolved and combined to hemoglobin, was measured at specific time points by sulfide complexation with monobromobimane (CMBBH2S). We found that using a potent reducing agent in vitro, H2S added to the whole blood had little interaction with the plasma proteins, as sulfide appeared to be primarily combined and then oxidized by hemoglobin. In vivo, H2S was undetectable in the blood in its soluble form in baseline conditions, while CMBBH2S averaged 0.7 ± 0.5 μM. During NaHS infusion, H2S was primarily present in nonsoluble form in the arterial blood: CMBBH2S was about 50 times higher than CgH2S at the lowest levels of exposure and 5 or 6 times at the levels wherein fatal apnea occurred. CgH2S averaged only 1.1 ± 0.7 μM when breathing increased, corresponding to a CMBBH2S of 11.1 ± 5.4 μM. Apnea occurred at CgH2S above 5.1 μM and CMBBH2S above 25.4 μM. At the cessation of exposure, CMBBH2S remained elevated, at about 3 times above baseline for at least 15 min. These data provide a frame of reference for studying the putative effects of endogenous H2S and for testing antidotes against its deadly effects. PMID:23904109

  7. Investigation of H2S separation from H2S/CH4 mixtures using functionalized and non-functionalized vertically aligned carbon nanotube membranes

    NASA Astrophysics Data System (ADS)

    Gilani, Neda; Towfighi, Jafar; Rashidi, Alimorad; Mohammadi, Toraj; Omidkhah, Mohammad Reza; Sadeghian, Ahmad

    2013-04-01

    Separation of H2S from binary mixtures of H2S/CH4 using vertically aligned carbon nanotube membranes fabricated in anodic aluminum oxide (AAO) template was studied experimentally. Carbon nanotubes (CNTs) were grown in five AAO templates with different pore diameters using chemical vapor deposition, and CNT/AAO membranes with tubular carbon nanotube structure and open caps were selected for separation of H2S. For this, two tubular CNT/AAO membranes were fabricated with the CNT inner diameters of 23 and 8 nm. It was found that permeability and selectivity of the membrane with inner diameter of 23 nm for CNT were independent of upstream feed pressure and H2S feed concentration unlike that of CNT having an inner diameter of 8 nm. Selectivity of these membranes for separation of H2S was obtained in the ranges of 1.36-1.58 and 2.11-2.86, for CNTs with internal diameters of 23 and 8 nm, respectively. In order to enhance the separation of H2S from H2S/CH4 mixtures, dodecylamine was used to functionalize the CNT/AAO membrane with higher selectivity. The results showed that for amido-functionalized membrane, both upstream feed pressure and H2S partial pressure in the feed significantly increased H2S permeability, and selectivity for H2S being in the range of 3.0-5.57 respectively.

  8. Role of chlorine in In2S3 for band alignment at nanoporous-TiO2/In2S3 interfaces

    NASA Astrophysics Data System (ADS)

    Owino Juma, Albert; Azarpira, Anahita; Steigert, Alexander; Pomaska, Manuel; Fischer, Christian-Herbert; Lauermann, Iver; Dittrich, Thomas

    2013-08-01

    Coatings of Cl-free and Cl-containing In2S3 (In2S3:Cl) layers were prepared by spray ion layer gas reaction on nanoporous TiO2 (np-TiO2). Charge separation in FTO/np-TiO2/In2S3:Cl, FTO/In2S3:Cl, FTO/np-TiO2/In2S3:acac, and FTO/In2S3:acac systems has been investigated by modulated surface photovoltage spectroscopy (SPV). The exponential defect tails below the band gap of In2S3 were reduced for In2S3:Cl. The analysis of the SPV spectra allowed to distinguish different mechanisms of charge separation and to deduce the conduction band offsets (about 0.3 eV and 0.05 eV for np-TiO2/In2S3:Cl and np-TiO2/In2S3:acac, respectively) in correlation with photoelectron measurements.

  9. Epithelial PIK3R1 (p85) and TP53 Regulate Survivin Expression during Adaptation to Ileocecal Resection.

    PubMed

    Cohran, Valeria; Managlia, Elizabeth; Bradford, Emily M; Goretsky, Tatiana; Li, Ting; Katzman, Rebecca B; Cheresh, Paul; Brown, Jeffrey B; Hawkins, Jennifer; Liu, Shirley X L; De Plaen, Isabelle G; Weitkamp, Jörn-Hendrik; Helmrath, Michael; Zhang, Zheng; Barrett, Terrence A

    2016-07-01

    Intestinal adaptation to small-bowel resection (SBR) after necrotizing enterocolitis expands absorptive surface areas and promotes enteral autonomy. Survivin increases proliferation and blunts apoptosis. The current study examines survivin in intestinal epithelial cells after ileocecal resection. Wild-type and epithelial Pik3r1 (p85α)-deficient mice underwent sham surgery or 30% resection. RNA and protein were isolated from small bowel to determine levels of β-catenin target gene expression, activated caspase-3, survivin, p85α, and Trp53. Healthy and post-resection human infant small-bowel sections were analyzed for survivin, Ki-67, and TP53 by immunohistochemistry. Five days after ileocecal resection, epithelial levels of survivin increased relative to sham-operated on mice, which correlated with reduced cleaved caspase-3, p85α, and Trp53. At baseline, p85α-deficient intestinal epithelial cells had less Trp53 and more survivin, and relative responses to resection were blunted compared with wild-type. In infant small bowel, survivin in transit amplifying cells increased 71% after SBR. Resection increased proliferation and decreased numbers of TP53-positive epithelial cells. Data suggest that ileocecal resection reduces p85α, which lowers TP53 activation and releases survivin promoter repression. The subsequent increase in survivin among transit amplifying cells promotes epithelial cell proliferation and lengthens crypts. These findings suggest that SBR reduces p85α and TP53, which increases survivin and intestinal epithelial cell expansion during therapeutic adaptation in patients with short bowel syndrome. PMID:27157990

  10. Effect of rare-earth doping in RCrSb3 (R = La, Pr, Sm, and Gd)

    SciTech Connect

    Jackson, D D; Fisk, Z

    2005-11-08

    We report on the electrical resistivity and magnetic susceptibility of La or Gd doped RCrSb{sub 3} (R=La, Pr, Sm, and Gd). Single crystals were grown by increasing the nominal dopant by 25%. In general, two magnetic ordering transitions are found, T{sub C1} is attributed to ferromagnetic ordering of the itinerant Cr sub-lattice, and, at lower temperatures, T{sub C2} is attributed to ordering of the localized rare-earth sub-lattice. Alloying on the rare-earth site varies the de Gennes factor, DG = (g-1){sup 2}J(J+1), and dT{sub C1}/d(DG) = -2K, while dT{sub C2}/d(DG) = 5K. These ordering temperatures are found to converge at GdCrSb{sub 3}, where a single ferrimagnetic transition is found at T{sub C2} = 86 K due to an anti-alignment of the itinerant Cr moments and the localized rare-earth moments. Initially, for DG < 3.5, the rare-earth moments are found to align ferromagnetically, and the paramagnetic Weiss temperature decreases at the same rate as T{sub C1}. But for DG > 4.5, the rare-earth sub-lattice anti-alignes with respect to the Cr sub-lattice, and the Weiss temperature decreases five times as fast. In the region between (3.5 < DG < 4.5), a first order phase transition is found at T{sub C2}.

  11. The structure of (3R)-hydroxyacyl-acyl carrier protein dehydratase (FabZ) from Pseudomonas aeruginosa.

    PubMed

    Kimber, Matthew S; Martin, Fernando; Lu, Yingjie; Houston, Simon; Vedadi, Masoud; Dharamsi, Akil; Fiebig, Klaus M; Schmid, Molly; Rock, Charles O

    2004-12-10

    Type II fatty acid biosynthesis systems are essential for membrane formation in bacteria, making the constituent proteins of this pathway attractive targets for antibacterial drug discovery. The third step in the elongation cycle of the type II fatty acid biosynthesis is catalyzed by beta-hydroxyacyl-(acyl carrier protein) (ACP) dehydratase. There are two isoforms. FabZ, which catalyzes the dehydration of (3R)-hydroxyacyl-ACP to trans-2-acyl-ACP, is a universally expressed component of the bacterial type II system. FabA, the second isoform, as has more limited distribution in nature and, in addition to dehydration, also carries out the isomerization of trans-2- to cis-3-decenoyl-ACP as an essential step in unsaturated fatty acid biosynthesis. We report the structure of FabZ from the important human pathogen Pseudomonas aeruginosa at 2.5 A of resolution. PaFabZ is a hexamer (trimer of dimers) with the His/Glu catalytic dyad located within a deep, narrow tunnel formed at the dimer interface. Site-directed mutagenesis experiments showed that the obvious differences in the active site residues that distinguish the FabA and FabZ subfamilies of dehydratases do not account for the unique ability of FabA to catalyze isomerization. Because the catalytic machinery of the two enzymes is practically indistinguishable, the structural differences observed in the shape of the substrate binding channels of FabA and FabZ lead us to hypothesize that the different shapes of the tunnels control the conformation and positioning of the bound substrate, allowing FabA, but not FabZ, to catalyze the isomerization reaction. PMID:15371447

  12. Comparative analysis of a putative tuberculosis-susceptibility gene, MC3R, and pseudogene sequences in cattle, African buffalo, hyena, rhinoceros and other African bovids and ruminants.

    PubMed

    Müller, A; Möller, M; Adams, L A; Warren, R M; Hoal, E G; van Helden, P D

    2012-01-01

    Studies in humans have suggested the possible involvement of melanocortin-3-receptor (MC3R) and other components of the central melanocortin system in host defense against mycobacteria. We report a genomic DNA nucleotide sequence highly homologous to human MC3R in several bovids and non-bovid African wildlife species. Nucleotide sequence analysis indicates that the orthologous genes of cattle and buffalo are highly homologous (89.4 and 90%, respectively) to the human MC3R gene. Sequence results also identified a typical non-functional, duplicated pseudogene, MC3RP, in 7 species from the family Bovidae. No pseudogene was found in animals outside Bovidae. The presence of the pseudogene in tuberculosis-susceptible species could have possible immunomodulatory effects on susceptibility to bovine tuberculosis infection, as well as a considerable influence on energy metabolism and food conversion efficiency. PMID:22286663

  13. Structure and Function of Four Classes of the 4Fe-4S Protein, IspH.

    PubMed

    Rao, Guodong; Oldfield, Eric

    2016-07-26

    IspH, (E)-1-hydroxy-2-methyl-but-2-enyl 4-diphosphate reductase, is an essential enzyme in isoprenoid biosynthesis and an important drug/herbicide target. Using X-ray crystallographic, bioinformatics, mutagenesis/kinetics/stability, and electron paramagnetic resonance (EPR) results, we show that organisms from different environments ultilize one of four main IspH classes. The classes are based on the arrangement of the aromatic residues near the 4Fe-4S cluster and the presence or absence of N- and C-terminal extensions. Class A enzymes are found primarily in anaerobic and microaerophilic bacteria. Class B enzymes are found in aerobic bacteria. Class C enzymes are found in cyanobacteria and plants. Class D enzymes are found in apicomplexan parasites. Using mutagenesis, we show that the cluster-associated aromatic groups in class A and class B IspHs enhance cluster oxidative stability. Y198A, F302A, and a C-terminal truncation mutant of the class B (Escherichia coli) IspH have catalytic activity lower than that of the wild-type protein when using methyl viologen as the electron donor, but higher activity with dithionite as the electron donor, due to ready access of the small reductant to the cluster, consistent with their increased oxygen and H2O2 sensitivity. F302A has the largest effect on the reaction rates, and EPR studies indicate this residue affects Fe-S cluster structure. Similar effects on cluster stability are seen with class A (F14A and Y98A) mutants; however, effects on ET rates are smaller, and there are no differences between the EPR spectra of mutant and wild-type proteins. Overall, the results are of general interest because they show, for the first time, that there are multiple IspH classes that have evolved to allow organisms to survive in diverse oxidative-stress environments. PMID:27357244

  14. Synthesis, Structure, and Characterization of Cu4S10(4-methylpyridine)4

    NASA Technical Reports Server (NTRS)

    Hepp, Aloysius F.; Richman, Robert M.; Duraj, Stan A.; Andras, Maria T.; Moore, Hall L.; Sabat, Michal; Eckles, William E.; Martuch, Robert A.

    1996-01-01

    The title compound, Cu4S10(4-methylpyridine)(sub 4) (dot) 4-methylpyridine was prepared by three different reactions: the oxidation of copper powder by sulfur and the reaction of copper (I) sulfide (or CuBr (dot) SMe2) with excess sulfur, both in the coordinating solvent, 4-methylpyridine. Red crystals of the compound obtained by layering with hexanes were subjected to single crystal X-ray diffraction. The structure was refined to R = 0.026 and R(sub w) = 0.036 in a space group P1bar (No. 2), with Z = 2, a = 13.983 (2) A, b = 15.384 (2) A, c = 9.660 (1) A, alpha = 93.87 (1)deg., beta = 93.38 (1)deg., gamma = 99.78 (1)deg., V = 2037.9 (9) A(exp 3). The compound has approximate S(sub 4) symmetry and consists of two pentasulfide chains linking four Cu(I) ions, each with a corrdinating 2-methylpyridine. The infrared spectrum was dominated by absorption due to coordinated 4-methylpyridine with several low-energy peaks attributable to S-S stretches, which were also observed by Raman spectroscopy. A featureless electronic absorption spectrum yielded a single peak in the near ultraviolet upon computer enhancement (lambda = 334 nm, epsilon = 10,000), most likely an intraligand transition. Cyclic voltammetry indicates that the polysulfide complex undergoes irrversible oxidation and reduction at +0.04 and -0.34 V vs. SCE, respectively, at 298 K in 4-methylpyridine when swept at 20 mV/sec. The electrochemical behavior was unvaried even at sweep rates as high as 100 V/sec.

  15. Near-threshold electron-impact excitation of the (3p{sup 5}4s4p){sup 4}S{sub /2} quasimetastable state in potassium

    SciTech Connect

    Borovik, A. A. Jr.; Borovik, A. A.; Zatsarinny, O.; Bartschat, K.

    2006-06-15

    Electron-impact excitation of the (3p{sup 5}4s4p){sup 4}S quasimetastable level in potassium has been investigated both experimentally and theoretically for incident energies up to 3 eV above the excitation threshold. The ejected-electron excitation function measured with an energy resolution of 0.25 eV suggests the presence of several strong resonances just above threshold. Satisfactory agreement with the excitation cross section obtained from a sophisticated B-spline R-matrix model with nonorthogonal orbitals supports the importance of K{sup -} resonances predominantly of the (3p{sup 5}4s4p{sup 2}) configuration. Good agreement between theory and experiment is also obtained for the optical excitation function measured earlier with a lower energy resolution of {approx_equal}1.2 eV. The branching ratios for decay of the (3p{sup 5}4s4p){sup 4}S{sub 3/2} level into the electron emission and the optical channels were obtained as 0.16 and 0.69, respectively.

  16. Phenotypic behavior of caveolin-3 R26Q, a mutant associated with hyperCKemia, distal myopathy, and rippling muscle disease.

    PubMed

    Sotgia, Federica; Woodman, Scott E; Bonuccelli, Gloria; Capozza, Franco; Minetti, Carlo; Scherer, Philipp E; Lisanti, Michael P

    2003-11-01

    Four different phenotypes have been associated with CAV3 mutations: limb girdle muscular dystrophy-1C (LGMD-1C), rippling muscle disease (RMD), and distal myopathy (DM), as well as idiopathic and familial hyperCKemia (HCK). Detailed molecular characterization of two caveolin-3 mutations (P104L and DeltaTFT), associated with LGMD-1C, shows them to impart a dominant-negative effect on wild-type caveolin-3, rendering it dysfunctional through sequestration in the Golgi complex. Interestingly, substitution of glutamine for arginine at amino acid position 26 (R26Q) of caveolin-3 is associated not only with RMD but also with DM and HCK. However, the phenotypic behavior of the caveolin-3 R26Q mutation has never been evaluated in cultured cells. Thus we characterized the cellular and molecular properties of the R26Q mutant protein to better understand how this mutation can manifest as such distinct disease phenotypes. Here, we show that the caveolin-3 R26Q mutant is mostly retained at the level of the Golgi complex. The caveolin-3 R26Q mutant formed oligomers of a much larger size than wild-type caveolin-3 and was excluded from caveolae-enriched membranes. However, caveolin-3 R26Q did not behave in a dominant-negative fashion when coexpressed with wild-type caveolin-3. Thus the R26Q mutation behaves differently from other caveolin-3 mutations (P104L and DeltaTFT) that have been previously characterized. These data provide a possible explanation for the scope of the various disease phenotypes associated with the caveolin-3 R26Q mutation. We propose a haploinsufficiency model in which reduced levels of wild-type caveolin-3, although not rendered dysfunctional due to the caveolin-3 R26Q mutant protein, are insufficient for normal muscle cell function. PMID:12839838

  17. S2P3-R (v1.0): a framework for efficient regional modelling of physical and biological structures and processes in shelf seas

    NASA Astrophysics Data System (ADS)

    Marsh, R.; Hickman, A. E.; Sharples, J.

    2015-10-01

    An established one-dimensional (1-D) model of Shelf Sea Physics and Primary Production (S2P3) is adapted for flexible use in selected regional settings over selected periods of time. This Regional adaptation of S2P3, the S2P3-R framework (v1.0), can be efficiently used to investigate physical and biological phenomena in shelf seas that are strongly controlled by vertical processes. These include spring blooms that follow the onset of stratification, tidal mixing fronts that seasonally develop at boundaries between mixed and stratified water, and sub-surface chlorophyll maxima that persist throughout summer. While not representing 3-D processes, S2P3-R reveals the horizontal variation of the key 1-D (vertical) processes. S2P3-R should therefore only be used in regions where horizontal processes - including mean flows, eddy fluxes and internal tides - are known to exert a weak influence in comparison with vertical processes. In such cases, S2P3-R may be used as a highly versatile research tool, alongside more complex and computationally expensive models. In undergraduate oceanography modules and research projects, the model serves as an effective practical tool for linking theory and field observations. Three different regional configurations of S2P3-R are described, illustrating a range of diagnostics, evaluated where practical with observations. The model can be forced with daily meteorological variables for any selected year in the reanalysis era (1948 onwards). Example simulations illustrate the considerable extent of synoptic-to-interannual variability in the physics and biology of shelf seas. In discussion, the present limitations of S2P3-R are emphasised, and future developments are outlined.

  18. Dispensability of the [4Fe-4S] cluster in novel homologues of adenine glycosylase MutY.

    PubMed

    Trasviña-Arenas, Carlos H; Lopez-Castillo, Laura M; Sanchez-Sandoval, Eugenia; Brieba, Luis G

    2016-02-01

    7,8-Dihydro-8-deoxyguanine (8oG) is one of the most common oxidative lesions in DNA. DNA polymerases misincorporate an adenine across from this lesion. Thus, 8oG is a highly mutagenic lesion responsible for G:C→T:A transversions. MutY is an adenine glycosylase, part of the base excision repair pathway that removes adenines, when mispaired with 8oG or guanine. Its catalytic domain includes a [4Fe-4S] cluster motif coordinated by cysteinyl ligands. When this cluster is absent, MutY activity is depleted and several studies concluded that the [4Fe-4S] cluster motif is an indispensable component for DNA binding, substrate recognition and enzymatic activity. In the present study, we identified 46 MutY homologues that lack the canonical cysteinyl ligands, suggesting an absence of the [4Fe-4S] cluster. A phylogenetic analysis groups these novel MutYs into two different clades. One clade is exclusive of the order Lactobacillales and another clade has a mixed composition of anaerobic and microaerophilic bacteria and species from the protozoan genus Entamoeba. Structural modeling and sequence analysis suggests that the loss of the [4Fe-4S] cluster is compensated by a convergent solution in which bulky amino acids substitute the [4Fe-4S] cluster. We functionally characterized MutYs from Lactobacillus brevis and Entamoeba histolytica as representative members from each clade and found that both enzymes are active adenine glycosylases. Furthermore, chimeric glycosylases, in which the [4Fe-4S] cluster of Escherichia coli MutY is replaced by the corresponding amino acids of LbY and EhY, are also active. Our data indicates that the [4Fe-4S] cluster plays a structural role in MutYs and evidences the existence of alternative functional solutions in nature. PMID:26613369

  19. A tetranucleotide repeat (D4S1652) is linked to facioscapulohumeral dystrophy and shows no linkage disequilibrium with the disease

    SciTech Connect

    Mathews, K.D.; Bailey, H.L.; Mills, K.A.

    1994-09-01

    Facioscapulohumeral dystrophy (FSHD) is an autosomal dominant dystrophy which is associated with a deletion in a subtelomeric repeat element on 4q35. The gene has not yet been identified. The probe detecting this deletion (D4F104S1) is not chromosome 4-specific, and at least one large family has been identified which is not linked to chromosome 4. Thus, persymptomatic/prenatal diagnosis can only be provided to families that are proven to be chromosome 4-linked or where a new mutation is demonstrated. The markers available to demonstrate linkage to chromosome 4, D4S139, D4S163, and D4F35S1, are VNTRs. We have used D4S1652, a tetranucleotide repeat recently identified by the Cooperative Human Linkage Center, in our FSHD families. We found it is completely linked to the 4q35 VNTRs and to the disease phenotype. Physical mapping, using radiation hybrids and somatic cell hybrids, places D4S1652 between D4S139, an interval of approximately 1 Mb. We have used D4S1652 to look for linkage disequilibrium in our FSHD patient population. This result is of interest because of our hypothesis that the deletion in the subtelomeric repeat element alters transcription of a more proximal gene through a position effect. Previously available markers have been unsatisfactory for this experiment because of difficulty comparing numerous VNTR alleles across families. We observed 4, easily distinguished, D4S1652 alleles in our families. We studied 14 chromosomes associated with disease phenotype and 55 chromosomes from nontransmitting parents. We found no evidence for linkage disequilibrium ({chi}{sup 2}=1.313, nonsignificant). This result will need confirmation with a larger patient population, but is consistent with the clinical observation that there is a high rate of a new mutation in this disorder.

  20. Phase transformation of Cu-rich precipitates from 9R to 3R variant via ledges mechanism in ferritic steel containing copper.

    PubMed

    Chen, B L; Wang, W; Xie, H; Ge, R R; Zhang, Z Y; Li, Z W; Zhou, X Y; Zhou, B X

    2016-04-01

    Precipitates and solute enrich in aged ferritic steel containing copper were examined using high-resolution electron microscopy, high-angle annular dark-field scanning transmission electron microscopy and energy-dispersive X-ray spectroscopy. Two ledges with one-atom and two-atom layers height in the 9R/3R interface were observed. The enrichment of copper into two successive closed-packed planes with an interval of Fe-rich close-packed plane was detected. The passage of the Shockley partial, or the shearing, changes the stacking sequence of closed-packed planes. Finally, 9R Cu variant transformed into 3R Cu variant. PMID:26599818

  1. Neomorphic Mutations in PIK3R1 Confer Sensitivity to MAPK Inhibitors due to Activation of ERK and JNK Pathways | Office of Cancer Genomics

    Cancer.gov

    In a recent publication in Cancer Cell, CTD2 investigators discovered that a known cancer-associated gain-of-function alteration in phosphoinositide-3-kinase regulatory subunit 1 (PIK3R1) results in novel protein activity that confers sensitivity to mitogen-activated protein kinase (MAPK) inhibitors. The PIK3R1 gene encodes the p85α regulatory subunit of PIK3. Under normal conditions, p85α suppresses PIK3 mediated activation of downstream pathways that promote cell growth and survival.

  2. Impact of fluctuations in gaseous H2S concentrations on sulfide uptake by sewer concrete: The effect of high H2S loads.

    PubMed

    Sun, Xiaoyan; Jiang, Guangming; Bond, Philip L; Keller, Jurg

    2015-09-15

    The acid production from the oxidation of hydrogen sulfide (H2S) in sewer air results in serious corrosion of exposed concrete surfaces in sewers. Large fluctuations of gaseous H2S concentrations occur in sewers due to the diurnal profiles of sewage flow and retention times and the necessity of intermittent pumping of sewage from pressure pipes into gravity pipes. How the high concentrations of H2S due to these events may affect H2S uptake and subsequent corrosion by concrete sewers is largely unknown. This study determined the effect of short- and long-term increases in H2S levels on the sulfide uptake rate (SUR) of concrete surfaces with an active corrosion layer. The results showed that during the high load situation the SUR increased significantly but then decreased (compared to the baseline SUR) by about 7-14% and 41-50% immediately after short- and long-term H2S high-load periods, respectively. For both exposure conditions, the SUR gradually (over several hours) recovered to approximately 90% of the baseline SUR. Further tests suggest multiple factors may contribute to the observed decrease of SUR directly after the high H2S load. This includes the temporary storage of elemental sulfur in the corrosion layer and inhibition of sulfide oxidizing bacteria (SOB) due to high H2S level and temporary acid surge. Additionally, the delay of the corrosion layer to fully recover the SUR after the high H2S load suggests that there is a longer-term inhibitive effect of the high H2S levels on the activity of the SOB in the corrosion layer. Due to the observed activity reductions, concrete exposed to occasional short-term high H2S load periods had an overall lower H2S uptake compared to concrete exposed to constant H2S levels at the same average concentration. To accurately predict H2S uptake by sewer concrete and hence the likely maximum corrosion rates, a correction factor should be adopted for the H2S fluctuations when average H2S levels are used in the prediction. PMID

  3. Jatropha curcas hemagglutinin is similar to a 2S albumin allergen from the same source and has unique sugar affinities.

    PubMed

    Nair, Divya N; Singh, Vijay; Yamaguchi, Yoshiki; Singh, Desh Deepak

    2012-11-01

    We have previously reported the purification and preliminary X-ray characterization of a hemagglutinin from the seeds of Jatropha curcas and, with the detailed sequencing information available now, we find that it is similar to a 2S albumin allergen isolated from the same source. Through a search of Jatropha genome database (http://www.kazusa.or.jp/jatropha/), we map it to the sequence id JcCA0234191 (now referred to as Jcr4S00619.70 in the new version, release 4.5) which has a conserved alpha amylase inhibitor/seed storage protein domain found in the 2S albumin allergens. The putative sequence of the small and large chains of the protein is assigned and the total mass of the two subunits matches with the intact mass 10 kDa determined through MALDI. The protein retains hemagglutination activity between pH 6-9 and up to 60 °C on heat treatment and its hemagglutination activity is inhibited by sialic acid and fetuin. Bioinformatics studies show that the isolated protein sequence clusters in close association with a 2S albumin from Ricinus communis in phylogeny analysis and has a conservation of the characteristic four disulfide linkage pattern. Hemagglutinins and lectins are known to have allergenic effects through their interaction with immunoglobulin E and histamine release and earlier studies have shown that this interaction can be inhibited by lectin-specific sugars. We hope this report bridges the plant allergens and hemagglutinins further for exploring possible mediation of allergenic activity through sialic acid and complex sugar interactions and generates further interest in the area. PMID:22798079

  4. Branching fractions for ψ(2S)-->γη' and γη

    NASA Astrophysics Data System (ADS)

    Bai, J. Z.; Bian, J. G.; Blum, I.; Chai, Z. W.; Chen, G. P.; Chen, H. F.; Chen, J.; Chen, J. C.; Chen, Y.; Chen, Y. B.; Chen, Y. Q.; Cheng, B. S.; Cui, X. Z.; Ding, H. L.; Ding, L. Y.; Dong, L. Y.; Du, Z. Z.; Dunwoodie, W.; Feng, S.; Gao, C. S.; Gao, M. L.; Gao, S. Q.; Gratton, P.; Gu, J. H.; Gu, S. D.; Gu, W. X.; Gu, Y. F.; Guo, Y. N.; Han, S. W.; Han, Y.; Harris, F. A.; He, J.; He, J. T.; He, M.; Hitlin, D. G.; Hu, G. Y.; Hu, H. M.; Hu, J. L.; Hu, Q. H.; Hu, T.; Hu, X. Q.; Huang, J. D.; Huang, Y. Z.; Izen, J. M.; Jiang, C. H.; Jin, Y.; Ke, Z. J.; Kelsey, M. H.; Kim, B. K.; Kong, D.; Lai, Y. F.; Lang, P. F.; Lankford, A.; Li, C. G.; Li, D.; Li, H. B.; Li, J.; Li, P. Q.; Li, R. B.; Li, W.; Li, W. D.; Li, W. G.; Li, X. H.; Li, X. N.; Liu, H. M.; Liu, J.; Liu, J. H.; Liu, R. G.; Liu, Y.; Lou, X. C.; Lowery, B.; Lu, F.; Lu, J. G.; Lu, J. Y.; Lu, L. C.; Luo, C. H.; Ma, A. M.; Ma, E. C.; Ma, J. M.; Malchow, R.; Mao, H. S.; Mao, Z. P.; Meng, X. C.; Nie, J.; Olsen, S. L.; Oyang, J.; Paluselli, D.; Pan, L. J.; Panetta, J.; Porter, F.; Qi, N. D.; Qi, X. R.; Qian, C. D.; Qiu, J. F.; Qu, Y. H.; Que, Y. K.; Rong, G.; Schernau, M.; Shao, Y. Y.; Shen, B. W.; Shen, D. L.; Shen, H.; Shen, X. Y.; Sheng, H. Y.; Shi, H. Z.; Song, X. F.; Standifird, J.; Sun, F.; Sun, H. S.; Tang, S. Q.; Toki, W.; Tong, G. L.; Wang, F.; Wang, L. S.; Wang, L. Z.; Wang, M.; Wang, Meng; Wang, P.; Wang, P. L.; Wang, S. M.; Wang, T. J.; Wang, Y. Y.; Weaver, M.; Wei, C. L.; Wu, Y. G.; Xi, D. M.; Xia, X. M.; Xie, P. P.; Xie, Y.; Xie, Y. H.; Xiong, W. J.; Xu, C. C.; Xu, G. F.; Xue, S. T.; Yan, J.; Yan, W. G.; Yang, C. M.; Yang, C. Y.; Yang, J.; Yang, W.; Yang, X. F.; Ye, M. H.; Ye, S. W.; Ye, Y. X.; Yi, K.; Yu, C. S.; Yu, C. X.; Yu, Y. H.; Yu, Z. Q.; Yu, Z. T.; Yuan, C. Z.; Yuan, Y.; Zhang, B. Y.; Zhang, C. C.; Zhang, D. H.; Zhang, Dehong; Zhang, H. L.; Zhang, J.; Zhang, J. L.; Zhang, J. W.; Zhang, L. S.; Zhang, Q. J.; Zhang, S. Q.; Zhang, X. Y.; Zhang, Y.; Zhang, Y. Y.; Zhao, D. X.; Zhao, H. W.; Zhao, J. W.; Zhao, M.; Zhao, W. R.; Zhao, Z. G.; Zheng, J. P.; Zheng, L. S.; Zheng, Z. P.; Zhou, G. P.; Zhou, H. S.; Zhou, L.; Zhu, Q. M.; Zhu, Y. C.; Zhu, Y. S.; Zhuang, B. A.

    1998-11-01

    We report first measurements of the branching fractions B(ψ2S-->γη')=(1.54+/-0.31+/-0.20)×10-4 and B(ψ2S-->γη)=(0.53+/-0.31+/-0.08)×10-4. The ψ(2S)-->γη' result is consistent with expectations of a model that considers the possibility of η'-ηc(2S) mixing. The ratio of the ψ(2S)-->γη' and ψ(2S)-->γη rates is used to determine the pseudoscalar octet-singlet mixing angle.

  5. A new strategy for introducing photoactivatable 4-thiouridine ((4S)U) into specific positions in a long RNA molecule.

    PubMed

    Yu, Y T; Steitz, J A

    1997-07-01

    We describe a new protocol, which does not require (4S)UpG, for introducing (4S)U into specific sites in a pre-mRNA substrate. A 5'-half and a full-length RNA are first synthesized by phage RNA polymerase. p(4S)Up, which is derived from (4S)UpU and can therefore be 32P-labeled, is then ligated to the 3' end of the 5'-half RNA with T4 RNA ligase. The 3' phosphate of the ligated product is removed subsequently by CIP (calf intestinal alkaline phosphatase) to produce a 3'-OH group. The 3'-half RNA with a 5' phosphate is produced by site-specific RNase H cleavage of the full-length pre-mRNA directed by a 2'-O-methyl RNA-DNA chimera. The two half RNAs are then aligned with a bridging oligonucleotide and ligated with T4 DNA ligase. Our results show that 32P-p(4S)Up ligation to the 3' end of the 5'-half RNA is comparable to 32P-pCp ligation. Also, the efficiency of the bridging oligonucleotide-mediated two-piece ligation is quite high, approximately 30-50%. This strategy has been applied to the P120 pre-mRNA containing an AT-AC intron, but should be applicable to many other RNAs. PMID:9214662

  6. Molecular characterization and analysis of high-level multidrug-resistance of Shigella flexneri serotype 4s strains from China

    PubMed Central

    Yang, Chaojie; Li, Peng; Zhang, Xiujuan; Ma, Qiuxia; Cui, Xianyan; Li, Hao; Liu, Hongbo; Wang, Jian; Xie, Jing; Wu, Fuli; Sheng, Chunyu; Du, Xinying; Qi, Lihua; Su, Wenli; Jia, Leili; Xu, Xuebin; Zhao, Jiayong; Xia, Shengli; Zhou, Na; Ma, Hui; Qiu, Shaofu; Song, Hongbin

    2016-01-01

    To conduct the first comprehensive analysis of Shigella flexneri serotype 4s, a novel serotype found in 2010, we identified 24 serotype 4s isolates from 1973 shigellosis cases in China (2002–2014). The isolates were characterized by single nucleotide polymorphism (SNP) phylogenetic analysis, pulsed-field gel electrophoresis (PFGE) and multilocus sequence typing (MLST) to determine their genetic relatedness, and analysed further for their antimicrobial susceptibilities and antimicrobial resistance determinants. The PFGE and SNP phylogenetic analyses suggest that S. flexneri serotype 4s strains are derived from multiple serotypes, including two predominant serotypes in China: serotype X variant and serotype II. Three new sequence types were identified by MLST. All isolates were resistant to ticarcillin, ampicillin and tetracycline, with high-level resistance to third-generation cephalosporins. Notably, all the isolates were multidrug resistant (MDR), with the highest levels of resistance observed for eight antimicrobials classes. Most isolates contain various antimicrobial resistance determinants. In conclusion, we found that serotype 4s isolates have multiple evolutionary sources, diverse biochemical characteristics and genomes, and highly prevalent multidrug resistance and antimicrobial-resistant determinants. With few clinical treatment options, continuous monitoring and timely intervention against this emerging MDR serotype is essential. The possibility that serotype 4s will become the next predominant serotype exists. PMID:27374009

  7. Molecular characterization and analysis of high-level multidrug-resistance of Shigella flexneri serotype 4s strains from China.

    PubMed

    Yang, Chaojie; Li, Peng; Zhang, Xiujuan; Ma, Qiuxia; Cui, Xianyan; Li, Hao; Liu, Hongbo; Wang, Jian; Xie, Jing; Wu, Fuli; Sheng, Chunyu; Du, Xinying; Qi, Lihua; Su, Wenli; Jia, Leili; Xu, Xuebin; Zhao, Jiayong; Xia, Shengli; Zhou, Na; Ma, Hui; Qiu, Shaofu; Song, Hongbin

    2016-01-01

    To conduct the first comprehensive analysis of Shigella flexneri serotype 4s, a novel serotype found in 2010, we identified 24 serotype 4s isolates from 1973 shigellosis cases in China (2002-2014). The isolates were characterized by single nucleotide polymorphism (SNP) phylogenetic analysis, pulsed-field gel electrophoresis (PFGE) and multilocus sequence typing (MLST) to determine their genetic relatedness, and analysed further for their antimicrobial susceptibilities and antimicrobial resistance determinants. The PFGE and SNP phylogenetic analyses suggest that S. flexneri serotype 4s strains are derived from multiple serotypes, including two predominant serotypes in China: serotype X variant and serotype II. Three new sequence types were identified by MLST. All isolates were resistant to ticarcillin, ampicillin and tetracycline, with high-level resistance to third-generation cephalosporins. Notably, all the isolates were multidrug resistant (MDR), with the highest levels of resistance observed for eight antimicrobials classes. Most isolates contain various antimicrobial resistance determinants. In conclusion, we found that serotype 4s isolates have multiple evolutionary sources, diverse biochemical characteristics and genomes, and highly prevalent multidrug resistance and antimicrobial-resistant determinants. With few clinical treatment options, continuous monitoring and timely intervention against this emerging MDR serotype is essential. The possibility that serotype 4s will become the next predominant serotype exists. PMID:27374009

  8. Singleminded-2s (Sim2s) promotes delayed involution of the mouse mammary gland through suppression of Stat3 and NFκB.

    PubMed

    Scribner, Kelly C; Wellberg, Elizabeth A; Metz, Richard P; Porter, Weston W

    2011-04-01

    Postlactational involution of the mammary gland provides a unique model to study breast cancer susceptibility and metastasis. We have shown that the short isoform of Singleminded-2s (Sim2s), a basic helix loop helix/PAS transcription factor, plays a role in promoting lactogenic differentiation, as well as maintaining mammary epithelial differentiation and malignancy. Sim2s is dynamically expressed during mammary gland development, with expression peaking during lactation, and decreasing in early involution. To determine the role of SIM2S in involution, we used transgenic mice expressing SIM2S under the mouse mammary tumor virus-Sim2s promoter. Overexpression of Sim2s in the mouse mammary gland resulted in delayed involution, indicated by a lower proportion of cleaved caspase-3-positive cells and slower reestablishment of the mammary fat pad. Immunohistochemical and quantitative RNA analysis showed a decrease in apoptotic markers and inflammatory response genes, and an increase in antiapoptotic genes, which were accompanied by inhibition of signal transducer and activator of transcription 3 activity. Microarray analysis confirmed that genes in the signal transducer and activator of transcription 3 signaling pathway were repressed by SIM2S expression, along with nuclear factor-κB and other key pathways involved in mammary gland development. Multiparous mouse mammary tumor virus-Sim2s females displayed a more differentiated phenotype compared with wild-type controls, characterized by enhanced β-casein expression and alveolar structures. Together, these results suggest a role for SIM2S in the normal involuting gland and identify potential downstream pathways regulated by SIM2S. PMID:21292822

  9. Are ‘Endurance’ Alleles ‘Survival’ Alleles? Insights from the ACTN3 R577X Polymorphism

    PubMed Central

    Fiuza-Luces, Carmen; Ruiz, Jonatan R.; Rodríguez-Romo, Gabriel; Santiago, Catalina; Gómez-Gallego, Félix; Yvert, Thomas; Cano-Nieto, Amalia; Garatachea, Nuria

    2011-01-01

    Exercise phenotypes have played a key role for ensuring survival over human evolution. We speculated that some genetic variants that influence exercise phenotypes could be associated with exceptional survival (i.e. reaching ≥100years of age). Owing to its effects on muscle structure/function, a potential candidate is the Arg(R)577Ter(X) polymorphism (rs1815739) in ACTN3, the structural gene encoding the skeletal muscle protein α-actinin-3. We compared the ACTN3 R577X genotype/allele frequencies between the following groups of ethnically-matched (Spanish) individuals: centenarians (cases, n = 64; 57 female; age range: 100–108 years), young healthy controls (n = 283, 67 females, 216 males; 21±2 years), and humans who are at the two end-points of exercise capacity phenotypes, i.e. muscle endurance (50 male professional road cyclists) and muscle power (63 male jumpers/sprinters). Although there were no differences in genotype/allele frequencies between centenarians (RR:28.8%; RX:47.5%; XX:23.7%), and controls (RR:31.8%; RX:49.8%; XX:18.4%) or endurance athletes (RR:28.0%; RX:46%; XX:26.0%), we observed a significantly higher frequency of the X allele (P = 0.019) and XX genotype (P = 0.011) in centenarians compared with power athletes (RR:47.6%; RX:36.5%;XX:15.9%). Notably, the frequency of the null XX (α-actinin-3 deficient) genotype in centenarians was the highest ever reported in non-athletic Caucasian populations. In conclusion, despite there were no significant differences with the younger, control population, overall the ACTN3 genotype of centenarians resembles that of world-class elite endurance athletes and differs from that of elite power athletes. Our preliminary data would suggest a certain ‘survival’ advantage brought about by α-actinin-3 deficiency and the ‘endurance’/oxidative muscle phenotype that is commonly associated with this condition. PMID:21407828

  10. [Effect of gametocidal chromosome 4S' on the phenotype segregation ratio in genetic analysis of common wheat lines].

    PubMed

    Vdovichenko, Zh V; Antoniuk, M Z; Ternovskaia, T K

    2003-01-01

    Using experimental data on genetic analysis of introgressive lines for the character "hairy leaf sheath" controlled by the "cuckoo" chromosome 4S1, the algorithm for calculation of the theoretical segregation ratio in F2 was developed. Segregation distortion is caused by non-viability of the majority of gametes lacking the chromosome 4S1. The frequency of functioning gametes without the chromosome 4S1 is determined by the probability p versus the theoretically expected ratio 7 nonviable: 9 viable ones. Since segregation involves two characters, gamete viability and hairiness, the ratio 15 hairy: 1 hairless was used as a basis for search of the frequency p by maximum-likelihood method using 16 populations F2 from crossing the lines differing in the character studied. PMID:14650327

  11. Measurement of the Ratio of Branching Fractions of the Υ(4S) to Charged and Neutral B Mesons

    NASA Astrophysics Data System (ADS)

    Godang, Romulus; Kinoshita, Kay

    2002-04-01

    Using 2.73 fb-1 of CLEO II data taken on the Υ(4S) and 1.43 fb-1 taken at a center of mass energy 60 MeV below the Υ(4S), we measure the ratio of production fractions times the ratio of semileptonic branching fractions, f_+-b_+\\over f_00b0 through the decays barB arrow D^*l^- barν_l, reconstructed using a partial reconstruction method. Assuming that b_+\\over b0 is equal to the lifetime ratio τ_+\\overτ0 and using the world average value of τ_+\\overτ_0, the ratio of branching fractions of the Υ(4S) to charged and neutral B mesons will be presented.

  12. The splitting and oscillator strengths for the 2S/2/S-2p/2/P/0/ doublet in lithium-like sulfur. [during Skylab observed solar flares

    NASA Technical Reports Server (NTRS)

    Pegg, D. J.; Forester, J. P.; Elston, S. B.; Griffin, P. M.; Peterson, R. S.; Thoe, R. S.; Vane, C. R.; Sellin, I. A.; Groeneveld, K.-O.

    1977-01-01

    The beam-foil technique has been used to study the 2S(2)S-2p(2)P(0) doublet in S XIV. The results confirm the doublet splitting measured aboard Skylab during solar flare events. In addition, the oscillator strengths for the resonance transitions comprising this doublet have been measured and found to agree well with recent relativistic f-value calculations.

  13. Effect of H2S concentration on the corrosion behavior of pipeline steel under the coexistence of H2S and CO2

    NASA Astrophysics Data System (ADS)

    Li, Da-peng; Zhang, Lei; Yang, Jian-wei; Lu, Min-xu; Ding, Jin-hui; Liu, Ming-liang

    2014-04-01

    The effect of H2S concentration on H2S/CO2 corrosion of API-X60 steel was studied by scanning electron microscopy, a weight-loss method, potentiodynamic polarization tests, and the electrochemical impedance spectroscopy technique. It is found that the corrosion process of the steel in an environment where H2S and CO2 coexist at different H2S concentrations is related to the morphological structure and stability of the corrosion product film. With the addition of a small amount of H2S, the size of the anode reaction region is decreased due to constant adsorption and separation of more FeS sediment or more FeHS+ ions on the surface of the steel. Meanwhile, the double-layer capacitance is diminished with increasing anion adsorption capacity. Therefore, the corrosion process is inhibited. The general corrosion rate of the steel rapidly decreases after the addition of a small amount of H2S under the coexistence of H2S and CO2. With a further increase in H2S concentration, certain parts of the corrosion product film become loose and even fall off. Thus, the protection provided by the corrosion product film worsens, and the corrosion rate tends to increase.

  14. Evolutionary sequenomics: The utility of comparative chromosomal synteny searches in revealing homologous DNA blocks derived from fish-specific 3R- and 4R-genome duplications

    Technology Transfer Automated Retrieval System (TEKTRAN)

    Most Actinopterygian fishes are believed to have arisen from a whole genome duplication approximately 275-350 MYA (3R duplication). Within the teleosts, several orders possess additional species that have undergone either an additional whole genome autopolyploid duplication (4R duplication), or are...

  15. Interaction transfer of silicon atoms forming Co silicide for Co/√(3)×√(3)R30°-Ag/Si(111) and related magnetic properties

    SciTech Connect

    Chang, Cheng-Hsun-Tony; Fu, Tsu-Yi; Tsay, Jyh-Shen

    2015-05-07

    Combined scanning tunneling microscopy, Auger electron spectroscopy, and surface magneto-optic Kerr effect studies were employed to study the microscopic structures and magnetic properties for ultrathin Co/√(3)×√(3)R30°-Ag/Si(111). As the annealing temperature increases, the upward diffusion of Si atoms and formation of Co silicides occurs at temperature above 400 K. Below 600 K, the √(3)×√(3)R30°-Ag/Si(111) surface structure persists. We propose an interaction transferring mechanism of Si atoms across the √(3)×√(3)R30°-Ag layer. The upward transferred Si atoms react with Co atoms to form Co silicide. The step height across the edge of the island, a separation of 0.75 nm from the analysis of the 2 × 2 structure, and the calculations of the normalized Auger signal serve as strong evidences for the formation of CoSi{sub 2} at the interface. The interaction transferring mechanism for Si atoms enhances the possibility of interactions between Co and Si atoms. The smoothness of the surface is advantage for that the easy axis of magnetization for Co/√(3)×√(3)R30°-Ag/Si(111) is in the surface plane. This provides a possible way of growing flat magnetic layers on silicon substrate with controllable silicide formation and shows potential applications in spintronics devices.

  16. 76 FR 59067 - Airworthiness Directives; Bombardier, Inc. Model CL-600-2B16 (CL-601-3A, CL-601-3R, and CL-604...

    Federal Register 2010, 2011, 2012, 2013, 2014

    2011-09-23

    ... ``significant rule'' under the DOT Regulatory Policies and Procedures (44 FR 11034, February 26, 1979); and 3.... Model CL-600-2B16 (CL- 601-3A, CL-601-3R, and CL-604 Variants) Airplanes AGENCY: Federal Aviation...) events have occurred where the Air-Driven Generator (ADG) failed to provide power on CL-600-2B19...

  17. A Quasi-Experimental Study of Adolescent Learning Using the SQ3R Strategy Instruction with Web-Based Learning Materials

    ERIC Educational Resources Information Center

    Guzniczak, Lizabeth A.

    2007-01-01

    The purpose of this quantitative study was to explore the effects of strategy instruction on lower and higher-level learning in the hypertext format of a WebQuest. The SQ3R and Classification/Categorization study strategies were used to investigate the effects of comprehension in a recall and essay task. Two hundred fifty-four eighth-grade…

  18. De novo PIK3R1 gain-of-function with recurrent sinopulmonary infections, long-lasting chronic CMV-lymphadenitis and microcephaly.

    PubMed

    Kuhlen, Michaela; Hönscheid, Andrea; Loizou, Loizos; Nabhani, Schafiq; Fischer, Ute; Stepensky, Polina; Schaper, Jörg; Klapper, Wolfram; Siepermann, Meinolf; Schuster, Friedhelm; Meisel, Roland; Borkhardt, Arndt

    2016-01-01

    PIK3R1 (phosphoinositide-3-kinase, regulatory subunit 1) gain-of-function has recently been described in patients with recurrent sinopulmonary infections, chronic CMV-/EBV-infections, lymphoproliferation, and hypogammaglobulinemia. Here we report a 15-year-old boy with treatment refractory CMV lymphadenitis, severe combined immunodeficiency, microcephaly and a severe developmental defect of Th17 cells. To avoid poor outcome, hematopoietic stem cell transplantation (HSCT) was performed. Subsequently, whole exome sequencing revealed a de novo heterozygous G-to-C mutation (chr5: 5:67,589,663: G>C) at the splice donor site of the PIK3R1 gene. Our data suggest that PIK3R1 gain-of-function leads to developmental defects in helper and regulatory T-cell subsets, the latter expanding the immunological features of PIK3R1 gain-of-function. T-cell subsets play a critical role in the regulation of immune response against infectious agents and of autoimmunity and thus may be particularly accountable for the clinical phenotype of affected patients. PMID:26529633

  19. Regulatory acceptance and use of 3R models for pharmaceuticals and chemicals: expert opinions on the state of affairs and the way forward.

    PubMed

    Schiffelers, Marie-Jeanne W A; Blaauboer, Bas J; Bakker, Wieger E; Beken, Sonja; Hendriksen, Coenraad F M; Koëter, Herman B W M; Krul, Cyrille

    2014-06-01

    Pharmaceuticals and chemicals are subjected to regulatory safety testing accounting for approximately 25% of laboratory animal use in Europe. This testing meets various objections and has led to the development of a range of 3R models to Replace, Reduce or Refine the animal models. However, these models must overcome many barriers before being accepted for regulatory risk management purposes. This paper describes the barriers and drivers and options to optimize this acceptance process as identified by two expert panels, one on pharmaceuticals and one on chemicals. To untangle the complex acceptance process, the multilevel perspective on technology transitions is applied. This perspective defines influences at the micro-, meso- and macro level which need alignment to induce regulatory acceptance of a 3R model. This paper displays that there are many similar mechanisms within both sectors that prevent 3R models from becoming accepted for regulatory risk assessment and management. Shared barriers include the uncertainty about the value of the new 3R models (micro level), the lack of harmonization of regulatory requirements and acceptance criteria (meso level) and the high levels of risk aversion (macro level). In optimizing the process commitment, communication, cooperation and coordination are identified as critical drivers. PMID:24534000

  20. a Quantum Chemical Study of the Structure and Chemistry of HZnCH_3, a Transition Metal Compound with 4s^2 Recoupled Pair Bonding

    NASA Astrophysics Data System (ADS)

    Woon, D. E.; Dunning, T. H.; , Jr.

    2011-06-01

    A structure was recently reported by Flory et al. for methyl zinc hydride, HZnCH_3, a molecule that may be formed via the direct insertion of Zn into one of the CH bonds of methane. The experiments were not able to demonstrate the formation pathway conclusively. The structures, bond energies, and other properties of HZnCH_3, ZnH, and ZnCH_3 were determined with high level coupled-cluster theory and multireference configuration interaction calculations in order to better understand the nature of the chemistry of HZnCH_3. The Zn--H and Zn--C bonds in HZnCH_3(X^1A_1) were found to be formed through recoupling the 4s^2 pair of Zn(^1S) in a manner that is very similar to the bonding in HBeCH_3 and other compounds where the 2s^2 pair of Be is recoupled. Various formation pathways were characterized, such as the analogous family of exchange reactions H + CH_4 → CH_4 + H, Zn + CH_4 → ZnCH_3 + H, and Be + CH_4 → BeCH_3 + H. Direct insertion may involve an intersystem crossing from the Zn(^3P) + CH_4 triplet surface to the singlet surface, which has been explored. M. A. Flory, A. J. Apponi, L. N. Zack, and L. M. Ziurys, J. Am. Chem. Soc. 132, 17186 (2010).

  1. Novel opioid peptide derived antagonists containing (2S)-2-methyl-3-(2,6-dimethyl-4-carbamoylphenyl)propanoic acid [(2S)-Mdcp].

    PubMed

    Ghosh, Animesh; Luo, Jie; Liu, Chen; Weltrowska, Grazyna; Lemieux, Carole; Chung, Nga N; Lu, Yixin; Schiller, Peter W

    2008-09-25

    A synthesis of the novel tyrosine analogue (2 S)-2-methyl-3-(2,6-dimethyl-4-carbamoylphenyl)propanoic acid [(2 S)-Mdcp] (15) was developed. In (2 S)-Mdcp, the amino and hydroxyl groups of 2',6'-dimethyltyrosine are replaced by a methyl and a carbamoyl group, respectively, and its substitution for Tyr (1) in opioid agonist peptides resulted in compounds showing antagonism at all three opioid receptors. The cyclic peptide (2 S)-Mdcp-c[D-Cys-Gly-Phe(pNO 2)-D-Cys]NH 2 (1) was a potent and selective mu antagonist, whereas (2 S)-Mdcp-c[D-Pen-Gly-Phe(pF)-Pen]-Phe-OH (3) showed subnanomolar delta antagonist activity and extraordinary delta selectivity. PMID:18800771

  2. Novel Opioid Peptide Derived Antagonists Containing (2S)-2-Methyl-3-(2,6-dimethyl-4-carbamoylphenyl)propanoic Acid [(2S)-Mdcp

    PubMed Central

    Ghosh, Animesh; Luo, Jie; Liu, Chen; Weltrowska, Grazyna; Lemieux, Carole; Chung, Nga N.; Lu, Yixin; Schiller, Peter W.

    2009-01-01

    A synthesis of the novel tyrosine analogue (2S)-2-methyl-3-(2,6-dimethyl-4-carbamoylphenyl)propanoic acid [(2S)-Mdcp] (15) was developed. In (2S)-Mdcp the amino- and hydroxyl groups of 2',6'-dimethyltyrosine are replaced by a methyl- and a carbamoyl group, respectively, and its substitution for Tyr1 in opioid agonist peptides resulted in compounds showing antagonism at all three opioid receptors. The cyclic peptide (2S)-Mdcp-c[D-Cys-Gly-Phe(pNO2)-D-Cys]NH2 (1) was a potent and selective μ antagonist, whereas (2S)-Mdcp-c[D-Pen-Gly-Phe(pF)-Pen]-Phe-OH (3) showed subnanomolar δ antagonist activity and extraordinary δ selectivity. PMID:18800771

  3. Factors affecting temporal H2S emission at construction and demolition (C&D) debris landfills.

    PubMed

    Xu, Qiyong; Townsend, Timothy

    2014-02-01

    Odor problems associated with H2S emissions often result in odor complaints from nearby residents of C&D debris landfills, especially in the early morning. As part of a field study conducted on H2S removal ability using different cover materials, daily and seasonal H2S emissions through a soil cover layer were monitored at a C&D debris landfill to investigate factors affecting H2S emissions. H2S emission rates were not a constant, but varied seasonally, with an average emission rate of 4.67×10(-6)mgm(-2)s(-1). During a the 10-month field study, as the H2S concentration increased from 140ppm to about 3500ppm underneath the cover soil in the testing cell, H2S emissions ranged from zero to a maximum emission rate of 1.24×10(-5)mgm(-2)s(-1). Continuous emission monitoring indicated that H2S emissions even changed over time throughout the day, generally increasing from morning to afternoon, and were affected by soil moisture and temperature. Laboratory experiments were also conducted to investigate the effects of H2S concentration and cover soil moisture content on H2S emissions. The results showed that increased soil moisture reduced H2S emissions by retarding H2S migration through cover soil and dissolving H2S into soil water. The field study also indicated that due to atmospheric dispersion, high H2S emissions may not cause odor problems. PMID:23968554

  4. Efficient Z-scheme photocatalyst from simultaneous decoration of In2S3 nanosheets and WO3 nanorods on graphene sheets.

    PubMed

    Zhang, Qingran; Luo, Mingbo; Sun, Ya-Ping; Liu, Yuanfang; Cao, Aoneng

    2016-07-15

    Inspired by natural photosynthesis, the Z-scheme photocatalyst is a promising approach to extend the absorption spectra of photocatalysts and reduce the recombination of photo-generated electrons and holes. However, the fabrication of well-structured efficient multi-component Z-scheme photocatalysts is still a big challenge. We report here a facile one-pot method to synthesize graphene-based Z-scheme photocatalysts. The one-pot method guarantees good distribution of well-structured individual components on thin-layered rGO sheets with excellent connections. With inactive WO3 nanorods and inactive β-In2S3 nanosheets attached to the surface of the rGO sheets, the synthesized In2S3/WO3/rGO tertiary nanocomposite shows excellent visible-light catalytic activity for hydrogen production at 1524 μmol g(-1) h(-1), demonstrating unambiguously the Z-scheme catalytic mechanism. To prevent cross-reactions and interferences, our strategy was to choose no more than one ionic precipitation reaction for the one-pot process, as unwanted cross-reactions could become inevitable if many cations and anions were present. This fabrication strategy should be applicable generally to synthesize other multiple-component nanocomposites, as demonstrated also by the preliminary results of the successful synthesis of the BiVO4/WO3/rGO nanocomposite (one ionic precipitation reaction and one hydrolysis reaction) and WO3/TiO2/rGO nanocomposite (two hydrolysis reactions). PMID:27263498

  5. Efficient Z-scheme photocatalyst from simultaneous decoration of In2S3 nanosheets and WO3 nanorods on graphene sheets

    NASA Astrophysics Data System (ADS)

    Zhang, Qingran; Luo, Mingbo; Sun, Ya-Ping; Liu, Yuanfang; Cao, Aoneng

    2016-07-01

    Inspired by natural photosynthesis, the Z-scheme photocatalyst is a promising approach to extend the absorption spectra of photocatalysts and reduce the recombination of photo-generated electrons and holes. However, the fabrication of well-structured efficient multi-component Z-scheme photocatalysts is still a big challenge. We report here a facile one-pot method to synthesize graphene-based Z-scheme photocatalysts. The one-pot method guarantees good distribution of well-structured individual components on thin-layered rGO sheets with excellent connections. With inactive WO3 nanorods and inactive β-In2S3 nanosheets attached to the surface of the rGO sheets, the synthesized In2S3/WO3/rGO tertiary nanocomposite shows excellent visible-light catalytic activity for hydrogen production at 1524 μmol g‑1 h‑1, demonstrating unambiguously the Z-scheme catalytic mechanism. To prevent cross-reactions and interferences, our strategy was to choose no more than one ionic precipitation reaction for the one-pot process, as unwanted cross-reactions could become inevitable if many cations and anions were present. This fabrication strategy should be applicable generally to synthesize other multiple-component nanocomposites, as demonstrated also by the preliminary results of the successful synthesis of the BiVO4/WO3/rGO nanocomposite (one ionic precipitation reaction and one hydrolysis reaction) and WO3/TiO2/rGO nanocomposite (two hydrolysis reactions).

  6. Synthesis, optical, photocatalytic, and electrochemical studies on Ag2S/ZnS and ZnS/Ag2S nanocomposites

    NASA Astrophysics Data System (ADS)

    Murugadoss, G.; Jayavel, R.; Rajesh Kumar, M.; Thangamuthu, R.

    2016-04-01

    Novel Ag2S/ZnS and ZnS/Ag2S nanocomposites were synthesized by a simple chemical method in air. Different morphologies were obtained for Ag2S/ZnS nanocomposites annealed at different temperatures. The products were characterized by X-ray diffraction (XRD), scanning electron microscopy (SEM), UV-visible absorption, and photoluminescence (PL) spectroscopy. Thermal stability and phase transition of the sample were studied by TG-DTA. Compared the PL spectra of Ag2S/ZnS at 640 nm, it was significantly red shifted from 640 to 670 nm for reversed ZnS/Ag2S nanocomposites. The band gaps of nanocomposites were lying between 2.25 and 2.55 eV range. It has been found that as-synthesized powder has excellent photocatalytic activity toward degradation of methylene blue (MB) under visible light and electrochemical activity, indicating that Ag2S/ZnS and ZnS/Ag2S nanocomposites can play an important role as semiconductor photocatalyst and energy storage applications.

  7. Growth of In/sub 2/S/sub 3/ and CdIn/sub 2/S/sub 4/ single crystals from a solution in a melt

    SciTech Connect

    Buzhor, V.P.; Lyalikova, R. Yu.; Radautsan, S.I.; Ratseev, S.A.; Tezlevan, V.E.

    1986-08-01

    The authors studied the reaction of In/sub 2/S/sub 3/ and CdIn/sub 2/S/sub 4/ with melts based on cadmium chloride. As the initial materials, they used polycrystalline In/sub 2/S/sub 3/ and CdIn/sub 2/S/sub 4/, cadmium chloride, and cadmium sulfide. The studies were carried out by the method of thermal analysis in sealed quartz ampules on an MOM derivatotograph. The solubility curve of In/sub 2/S/sub 3/ in a cadmium chloride melt is given. Nucleation occurs both within the liquid pahse and on the walls of the reaction container. At cooling rates of 4-5 K/h, with a charge of 100 g in a reaction container of diameter 20 mm the authors obtained In/sub 2/S/sub 3/ and CdIn/sub 2/S/sub 4/ crystals measuring 10-12 mm in size.

  8. 40 CFR 123.35 - As the NPDES Permitting Authority for regulated small MS4s, what is my role?

    Code of Federal Regulations, 2014 CFR

    2014-07-01

    ... 40 Protection of Environment 22 2014-07-01 2013-07-01 true As the NPDES Permitting Authority for regulated small MS4s, what is my role? 123.35 Section 123.35 Protection of Environment ENVIRONMENTAL PROTECTION AGENCY (CONTINUED) WATER PROGRAMS STATE PROGRAM REQUIREMENTS State Program Submissions § 123.35 As the NPDES Permitting Authority...

  9. Structure and Function of a Bacterial Microcompartment Shell Protein Engineered to Bind a [4Fe-4S] Cluster.

    PubMed

    Aussignargues, Clément; Pandelia, Maria-Eirini; Sutter, Markus; Plegaria, Jefferson S; Zarzycki, Jan; Turmo, Aiko; Huang, Jingcheng; Ducat, Daniel C; Hegg, Eric L; Gibney, Brian R; Kerfeld, Cheryl A

    2016-04-27

    Bacterial microcompartments (BMCs) are self-assembling organelles composed of a selectively permeable protein shell and encapsulated enzymes. They are considered promising templates for the engineering of designed bionanoreactors for biotechnology. In particular, encapsulation of oxidoreductive reactions requiring electron transfer between the lumen of the BMC and the cytosol relies on the ability to conduct electrons across the shell. We determined the crystal structure of a component protein of a synthetic BMC shell, which informed the rational design of a [4Fe-4S] cluster-binding site in its pore. We also solved the structure of the [4Fe-4S] cluster-bound, engineered protein to 1.8 Å resolution, providing the first structure of a BMC shell protein containing a metal center. The [4Fe-4S] cluster was characterized by optical and EPR spectroscopies; it has a reduction potential of -370 mV vs the standard hydrogen electrode (SHE) and is stable through redox cycling. This remarkable stability may be attributable to the hydrogen-bonding network provided by the main chain of the protein scaffold. The properties of the [4Fe-4S] cluster resemble those in low-potential bacterial ferredoxins, while its ligation to three cysteine residues is reminiscent of enzymes such as aconitase and radical S-adenosymethionine (SAM) enzymes. This engineered shell protein provides the foundation for conferring electron-transfer functionality to BMC shells. PMID:26704697

  10. A nanofiber assembly directed by the non-classical antiparallel β-structure from 4S-(OH) proline polypeptide.

    PubMed

    Bansode, Nitin D; Sonar, Mahesh V; Ganesh, Krishna N

    2016-04-01

    The antiparallel arrangement of two strands of the non-classical β-structure, formed exclusively via cis-4S-(OH) prolyl polypeptide as established by FRET, propagates into self-assembled nanofibers upon conjugation with C12/C14/C16 hydrocarbon chains. PMID:26961970

  11. 40 CFR 122.30 - What are the objectives of the storm water regulations for small MS4s?

    Code of Federal Regulations, 2011 CFR

    2011-07-01

    ... 40 Protection of Environment 22 2011-07-01 2011-07-01 false What are the objectives of the storm... objectives of the storm water regulations for small MS4s? (a) Sections 122.30 through 122.37 are written in a... 402(p)(6) of the Clean Water Act, the purpose of this portion of the storm water program is...

  12. 40 CFR 122.30 - What are the objectives of the storm water regulations for small MS4s?

    Code of Federal Regulations, 2013 CFR

    2013-07-01

    ... 40 Protection of Environment 23 2013-07-01 2013-07-01 false What are the objectives of the storm... objectives of the storm water regulations for small MS4s? (a) Sections 122.30 through 122.37 are written in a... 402(p)(6) of the Clean Water Act, the purpose of this portion of the storm water program is...

  13. 40 CFR 122.30 - What are the objectives of the storm water regulations for small MS4s?

    Code of Federal Regulations, 2012 CFR

    2012-07-01

    ... 40 Protection of Environment 23 2012-07-01 2012-07-01 false What are the objectives of the storm... objectives of the storm water regulations for small MS4s? (a) Sections 122.30 through 122.37 are written in a... 402(p)(6) of the Clean Water Act, the purpose of this portion of the storm water program is...

  14. 40 CFR 122.30 - What are the objectives of the storm water regulations for small MS4s?

    Code of Federal Regulations, 2014 CFR

    2014-07-01

    ... 40 Protection of Environment 22 2014-07-01 2013-07-01 true What are the objectives of the storm... objectives of the storm water regulations for small MS4s? (a) Sections 122.30 through 122.37 are written in a... 402(p)(6) of the Clean Water Act, the purpose of this portion of the storm water program is...

  15. 40 CFR 122.30 - What are the objectives of the storm water regulations for small MS4s?

    Code of Federal Regulations, 2010 CFR

    2010-07-01

    ... 40 Protection of Environment 21 2010-07-01 2010-07-01 false What are the objectives of the storm... objectives of the storm water regulations for small MS4s? (a) Sections 122.30 through 122.37 are written in a... 402(p)(6) of the Clean Water Act, the purpose of this portion of the storm water program is...

  16. Droplet-based microreactor for synthesis of water-soluble Ag2S quantum dots

    NASA Astrophysics Data System (ADS)

    Shu, Yun; Jiang, Peng; Pang, Dai-Wen; Zhang, Zhi-Ling

    2015-07-01

    A droplet-based microreactor was used for synthesis of water-soluble Ag2S quantum dots (QDs). Monodispersed Ag2S nanoparticles with a surface of carboxylic acid-terminated were synthesized in the droplet microreactor. The x-ray powder diffraction results indicated products were monoclinic Ag2S nanocrystals. Furthermore, different-sized Ag2S QDs that were near-infrared-emitting or visible-emitting were continuously stably synthesized in droplet microreactors at different temperatures. We believe we offer a new method for obtaining different-sized Ag2S nanoparticles.

  17. Evaluation of plasma H2S levels and H2S synthesis in streptozotocin induced Type-2 diabetes-an experimental study based on Swietenia macrophylla seeds

    PubMed Central

    Dutta, Moumita; Biswas, Utpal Kumar; Chakraborty, Runu; Banerjee, Piyasa; Raychaudhuri, Utpal; Kumar, Arun

    2014-01-01

    Objective To evaluate the plasma H2S levels and H2S synthesis activity in streptozotocin induced type 2 diabetes rats compared to the healthy controls and also to observe the effect of the aqueous extract of Swietenia macrophylla (S. macrophylla) seeds on the experimental groups. Methods Seeds of S. macrophylla were separated, washed, shed-dried and finally extract was prepared. Thirty two wistar rats were selected for the experimental study. Streptozotocin was used for the induction of diabetes. H2S concentration in plasma was measured. H2S synthesizing activity in plasma was measured. Statistical analysis have done using Microsoft excel, Office 2003. Values were expressed by mean±SD. P<0.05 were considered statistically significant. Results Fasting blood glucose level (7.74±0.02) mmol/L was significantly increased in diabetic rats. The glucose levels are significantly lowered in the rats treated with metformin (5.48±0.03) mmol/L as well as with aqueous extract of S. macrophylla seeds (3.72±0.04) mmol/L. The HbA1c percentages in different groups of study subjects also indicate similar trends. Our study shows both the plasma H2S levels (22.07±0.73) mmol/L and plasma H2S synthesis activity (0.411±0.005 mmol/100 g) are significantly reduced in the streptozotocin induced diabetic rats. Conclusions Although considering a small sample size, it can conclude that the fasting blood glucose levels are inversely related to plasma H2S levels as well as H2S synthesis activity in plasma and the extract of S. macrophylla is associated with increased plasma H2S levels with effective lowering of blood glucose in streptozotocin induced diabetic rats. PMID:25183134

  18. Electrical and optical characterization of green synthesized Gd2S3

    NASA Astrophysics Data System (ADS)

    Paul, Somnath; Sarkar, A.

    2016-05-01

    Gadolinium sulphide (Gd2S3) is a magnetic semiconductor with large band gap. Gd2S3 was synthesized following chemical and green techniques. Later process provides good stability of the nano clusters (NC) due to in-situ capping of Gd2S3 NC. It has been found that the optical band gap in Gd2S3 developed by green synthesis is lowered considerably over that in chemically synthesized Gd2S3. The green agencies used in this work are Jatropha Latex and dilute Garlic extract; both are enriched in sulphur and other organic polymer molecules. Simple observation shows that Gd2S3 NC retains residual magnetization. In this work optical and electrical characterization of the developed Gd2S3 specimens are carried out. The overall results obtained are good.

  19. H2S Analysis in Biological Samples Using Gas Chromatography with Sulfur Chemiluminescence Detection

    PubMed Central

    Vitvitsky, Victor; Banerjee, Ruma

    2015-01-01

    Hydrogen sulfide (H2S) is a metabolite and signaling molecule in biological tissues that regulates many physiological processes. Reliable and sensitive methods for H2S analysis are necessary for a better understanding of H2S biology and for the pharmacological modulation of H2S levels in vivo. In this chapter, we describe the use of gas chromatography coupled to sulfur chemiluminescence detection to measure the rates of H2S production and degradation by tissue homogenates at physiologically relevant concentrations of substrates. This method allows separation of H2S from other sulfur compounds and provides sensitivity of detection to ~15 pg (or 0.5 pmol) of H2S per injected sample. PMID:25725519

  20. The Transmembrane Domain of CEACAM1-4S Is a Determinant of Anchorage Independent Growth and Tumorigenicity

    PubMed Central

    Lawson, Erica L.; Mills, David R.; Brilliant, Kate E.; Hixson, Douglas C.

    2012-01-01

    CEACAM1 is a multifunctional Ig-like cell adhesion molecule expressed by epithelial cells in many organs. CEACAM1-4L and CEACAM1-4S, two isoforms produced by differential splicing, are predominant in rat liver. Previous work has shown that downregulation of both isoforms occurs in rat hepatocellular carcinomas. Here, we have isolated an anchorage dependent clone, designated 253T-NT that does not express detectable levels of CEACAM1. Stable transfection of 253-NT cells with a wild type CEACAM1-4S expression vector induced an anchorage independent growth in vitro and a tumorigenic phenotype in vivo. These phenotypes were used as quantifiable end points to examine the functionality of the CEACAM1-4S transmembrane domain. Examination of the CEACAM1 transmembrane domain showed N-terminal GXXXG dimerization sequences and C-terminal tyrosine residues shown in related studies to stabilize transmembrane domain helix-helix interactions. To examine the effects of transmembrane domain mutations, 253-NT cells were transfected with transmembrane domain mutants carrying glycine to leucine or tyrosine to valine substitutions. Results showed that mutation of transmembrane tyrosine residues greatly enhanced growth in vitro and in vivo. Mutation of transmembrane dimerization motifs, in contrast, significantly reduced anchorage independent growth and tumorigenicity. 253-NT cells expressing CEACAM1-4S with both glycine to leucine and tyrosine to valine mutations displayed the growth-enhanced phenotype of tyrosine mutants. The dramatic effect of transmembrane domain mutations constitutes strong evidence that the transmembrane domain is an important determinant of CEACAM1-4S functionality and most likely by other proteins with transmembrane domains containing dimerization sequences and/or C-terminal tyrosine residues. PMID:22235309

  1. X-Ray Absorption Spectroscopic And Theoretical Studies on (L)(2)[Cu-2(S-2)N](2+) Complexes: Disulfide Versus Disulfide(Center Dot 1-) Bonding

    SciTech Connect

    Sarangi, R.; York, J.T.; Helton, M.E.; Fujisawa, K.; Karlin, K.D.; Tolman, W.B.; Hodgson, K.O.; Hedman, B.; Solomon, E.I.; /Stanford U., Chem. Dept. /SLAC, SSRL /Minnesota U. /Johns Hopkins U. /Tsukuba U.

    2009-04-30

    Cu K-, Cu L-, and S K-edge X-ray absorption spectroscopic (XAS) data have been combined with density functional theory (DFT) calculations on [{l_brace}(TMPA)Cu{r_brace}{sub 2}S{sub 2}](ClO{sub 4}){sub 2} (1), [{l_brace}Cu[HB(3,5-Pr{sub 2}{sup i}pz){sub 3}]{r_brace}{sub 2}(S{sub 2})] (2), and [{l_brace}(TMEDA)Cu{r_brace}{sub 2}(S{sub 2}){sub 2}](OTf){sub 2} (3) to obtain a quantitative description of their ground state wavefunctions. The Cu L-edge intensities give 63 and 37% Cu d-character in the ground state of 1 and 2, respectively, whereas the S K-pre-edge intensities reflect 20 and 48% S character in their ground states, respetively. These data indicate a more than 2-fold increase in the total disulfide bonding character in 2 relative to 1. The increase in the number of Cu?S bonds in 2 ({mu}-{eta}{sup 2}:{eta}{sup 2} S{sub 2}{sup 2-} bridge) compared to 1 ({mu}-{eta}{sup 1}:{eta}{sup 1} S{sub 2}{sup 2-} bridge) dominantly determines the large increase in covalency and Cu-disulfide bond strength in 2. Cu K- and L- and S K-pre-edge energy positions directly demonstrate the Cu{sup II}/(S{sub 2}{sup -}){sub 2} nature of 3. The two disulfide({center_dot}1?)'s in 3 undergo strong bonding interactions that destabilize the resultant filled antibonding {pi}* orbitals of the (S{sub 2}{sup -}){sub 2} fragment relative to the Cu 3d levels. This leads to an inverted bonding scheme in 3 with dominantly ligand-based holes in its ground state, consistent with its description as a dicopper(II)-bis-disulfide({center_dot}1?) complex.

  2. Comparative study of FeCr2S4 and FeSc2S4 : Spinels with orbitally active A site

    NASA Astrophysics Data System (ADS)

    Sarkar, S.; Maitra, T.; Valentí, Roser; Saha-Dasgupta, T.

    2010-07-01

    Using first-principles density-functional calculations, we perform a comparative study of two Fe-based spinel compounds, FeCr2S4 and FeSc2S4 . Though both systems contain an orbitally active A site with an Fe2+ ion, their properties are rather dissimilar. Our study unravels the microscopic origin of their behavior driven by the differences in hybridization of Fed states with Cr/Scd states and Sp states in the two cases. This leads to important differences in the nature of the magnetic exchanges as well as the nearest-versus next-nearest-neighbor exchange parameter ratios, resulting into significant frustration effects in FeSc2S4 which are absent in FeCr2S4 .

  3. The Borosulfates K4 [BS4 O15 (OH)], Ba[B2 S3 O13 ], and Gd2 [B2 S6 O24 ].

    PubMed

    Gross, Peter; Kirchhain, Arno; Höppe, Henning A

    2016-03-18

    K4 [BS4 O15 (OH)], Ba[B2 S3 O13 ], and Gd2 [B2 S6 O24 ] were obtained by a new synthetic approach. The strategy involves initially synthesizing the complex acid H[B(HSO4 )4 ] which is subsequently reacted in an open system with anhydrous chlorides of K, Ba, and Gd to the respective borosulfates and a volatile molecule (HCl). Furthermore, protonated borosulfates should be accessible by appropriate stoichiometry of the starting materials, particularly in closed systems, which inhibit deprotonation of H[B(HSO4 )4 ] via condensation and dehydration. This approach led to the successful synthesis of the first divalent and trivalent metal borosulfates (Ba[B2 S3 O13 ] with band-silicate topology and Gd2 [B2 S6 O24 ] with cyclosilicate topology) and the first hydrogen borosulfate K4 [BS4 O15 (OH)]. PMID:26924507

  4. Fabrication and characterization of a nanostructured TiO2/In2S3-Sb2S3/CuSCN extremely thin absorber (eta) solar cell

    NASA Astrophysics Data System (ADS)

    Huerta-Flores, Alí M.; García-Gómez, Nora A.; de la Parra-Arciniega, Salomé M.; Sánchez, Eduardo M.

    2016-08-01

    In this work we report the successful assembly and characterization of a TiO2/In2S3-Sb2S3/CuSCN extremely thin absorber solar cell. Nanostructured TiO2 deposited by screen printing on an ITO substrate was used as an n-type electrode. An ∼80 nm extremely thin layer of the system In2S3-Sb2S3 deposited by successive ionic layer adsorption and a reaction (silar) method was used as an absorber. The voids were filled with p-type CuSCN and the entire assembly was completed with a gold contact. The solar cell fabricated with this heterostructure showed an energy conversion efficiency of 4.9%, which is a promising result in the development of low cost and simple fabrication of solar cells.

  5. Magnetic properties of (FeIn{sub 2}S{sub 4}){sub 1-x}(In{sub 2}S{sub 3}){sub x} alloy single crystals

    SciTech Connect

    Bodnar, I. V. Novikova, M. A.; Trukhanov, S. V.

    2013-05-15

    (FeIn{sub 2}S{sub 4}){sub 1-x}(In{sub 2}S{sub 3}){sub x} alloy single crystals are grown by oriented crystallization in the entire range of component concentrations. For the single crystals, studies of the magnetic properties are carried out in the temperature range 4-300 K and the magnetic-field range 0-14 T. It is established that almost all of the alloys are paramagnetic materials at temperatures down to the lowest achievable temperatures ({approx}4 K). It is shown that the ground magnetic phase state of the alloys is the spin-glass state with the freezing temperature steadily increasing with increasing Fe{sup 2+} cation content. The most probable causes and mechanism of formation of the magnetic state of the (FeIn{sub 2}S{sub 4}){sub 1-x}(In{sub 2}S{sub 3}){sub x} crystals are discussed.

  6. (121,123)Sb and (75)As NMR and NQR investigation of the tetrahedrite (Cu12Sb4S13)--Tennantite (Cu12As4S13) system and other metal arsenides.

    PubMed

    Bastow, T J; Lehmann-Horn, J A; Miljak, D G

    2015-10-01

    This work is motivated by the recent developments in online minerals analysis in the mining and minerals processing industry via nuclear quadrupole resonance (NQR). Here we describe a nuclear magnetic resonance (NMR) and NQR study of the minerals tennantite (Cu12As4S13) and tetrahedrite (Cu12 Sb4S13). In the first part NQR lines associated with (75)As in tennantite and (121,123)Sb isotopes in tetrahedrite are reported. The spectroscopy has been restricted to an ambient temperature studies in accord with typical industrial conditions. The second part of this contribution reports nuclear quadrupole-perturbed NMR findings on further, only partially characterised, metal arsenides. The findings enhance the detection capabilities of NQR based analysers for online measurement applications and may aid to control arsenic and antimony concentrations in metal processing stages. PMID:26453410

  7. Linear and nonlinear optical properties of α-K2Hg3Ge2S8 and α-K2Hg3Sn2S8 compounds

    NASA Astrophysics Data System (ADS)

    Reshak, A. H.; Azam, Sikander

    2014-11-01

    The linear and nonlinear optical properties of α-K2Hg3Ge2S8 and α-K2Hg3Sn2S8 compounds are performed using the first-principles calculations. Particularly, we appraised the optical dielectric function and the second-harmonic generation (SHG) response. We have analyzed the linear optical properties, i.e. the real and imaginary part of the dielectric tensor, the reflectivity, refractive index, extension coefficient and energy loss function. The linear optical properties show a considerable anisotropy which is important for SHG as it is defined by the phase-matching condition. The scrutiny of the roles of diverse transitions to the SHG coefficients demonstrates that the virtual electron process is foremost. The features in the spectra of χ322(2)(ω) are successfully interrelated with the character of the linear dielectric function ε(ω) in terms of single-photon and two-photon resonances. In additional, we have calculated the first hyperpolarizability, βijk, for the dominant component at the static limit for the for α-K2Hg3Ge2S8 and α-K2Hg3Sn2S8 compounds. The calculated values of β322(ω) are 2.28 × 10-30 esu for α-K2Hg3Ge2S8 and 3.69 × 10-30 esu for α-K2Hg3Sn2S8.

  8. Effect of hot pressing temperature on the electrochemical stability of Li2S-P2S5 (75 -- 25 % mole) as a solid electrolyte

    NASA Astrophysics Data System (ADS)

    Garcia Mendez, Maria Regina

    Solid state batteries can contribute to a more sustainable energy future providing the energy required when needed. It can facilitate the integration of renewable energy into the electrical grid and can provide the energy density required to make electric vehicles a massive technology without greenhouse emissions in operating conditions. To concretize the latter, high-performance electrolytes are necessary. Li2S-P2S5 (75-25% mole) is a promising solid-electrolyte that could potentially be used for this purpose. Its most appealing features include: high ionic conductivity at room temperature (~10-3 S/cm), low-temperature processing conditions, and low cost. Most likely, Li2S-P 2S5 (75-25% mole) would be integrated in a battery system using Li metal as an anode. Therefore, its stability against metallic lithium must be understood. The purpose of this work is to characterize the effect of Li2S-P2S5 (75-25% mole) processing conditions, most specifically hot pressing, and their effect on Li stability. It was found that improvements on electrochemical performance can be attained by promoting particle chemistry during hot pressing.

  9. Reduced Glutathione Mediates Resistance to H2S Toxicity in Oral Streptococci.

    PubMed

    Ooi, Xi Jia; Tan, Kai Soo

    2016-01-01

    Periodontal disease is associated with changes in the composition of the oral microflora, where health-associated oral streptococci decrease while Gram-negative anaerobes predominate in disease. A key feature of periodontal disease-associated anaerobes is their ability to produce hydrogen sulfide (H2S) abundantly as a by-product of anaerobic metabolism. So far, H2S has been reported to be either cytoprotective or cytotoxic by modulating bacterial antioxidant defense systems. Although oral anaerobes produce large amounts of H2S, the potential effects of H2S on oral streptococci are currently unknown. The aim of this study was to determine the effects of H2S on the survival and biofilm formation of oral streptococci. The growth and biofilm formation of Streptococcus mitis and Streptococcus oralis were inhibited by H2S. However, H2S did not significantly affect the growth of Streptococcus gordonii or Streptococcus sanguinis. The differential susceptibility of oral streptococci to H2S was attributed to differences in the intracellular concentrations of reduced glutathione (GSH). In the absence of GSH, H2S elicited its toxicity through an iron-dependent mechanism. Collectively, our results showed that H2S exerts antimicrobial effects on certain oral streptococci, potentially contributing to the decrease in health-associated plaque microflora. PMID:26801579

  10. Medicinal Chemistry: Insights into the Development of Novel H2S Donors.

    PubMed

    Zhao, Yu; Pacheco, Armando; Xian, Ming

    2015-01-01

    Hydrogen sulfide (H2S) was traditionally considered as a toxic gas. However, recent studies have demonstrated H2S is an endogenously generated gaseous signaling molecule (gasotransmitter) with importance on par with that of two other well-known endogenous gasotransmitters, nitric oxide (NO) and carbon monoxide (CO). Although H2S's exact mechanisms of action are still under investigation, the production of endogenous H2S and the exogenous administration of H2S have been demonstrated to elicit a wide range of physiological responses including modulation of blood pressure and protection of ischemia reperfusion injury, exertion of anti-inflammatory effects, and reduction of metabolic rate. These results strongly suggest that modulation of H2S levels could have potential therapeutic values. In this regard, synthetic H2S-releasing agents (i.e., H2S donors) are not only important research tools, but also potential therapeutic agents. This chapter summarizes the knowledge of currently available H2S donors. Their preparation, H2S releasing mechanisms, and biological applications are discussed. PMID:26162844

  11. In Situ Growth of In2S3 Nanorods in Poly(3-Hexylthiophene) Hybrid Films

    NASA Astrophysics Data System (ADS)

    Cota-Leal, M.; Sotelo-Lerma, M.; Corona-Corona, I.; Quevedo-Lopez, M. A.

    2016-04-01

    A novel and efficient gas-liquid method for the in situ synthesis of In2S3 nanorods in a poly(3-hexylthiophene) (P3HT) matrix is demonstrated. The method involves a self-contained reaction between Na2S and HCl that produces H2S, which reacts with a P3HT/InCl3 solution resulting in hybrid P3HT/In2S3 films. The Na2S solution is regenerated for further use. The method yielded results in In2S3 nanoparticles and nanorods in a P3HT matrix, as observed by transmission electron microscopy. The In2S3 nanorods are 3 nm wide and ~30 nm long. The size of the nanorods is dependent on the P3HT concentration. The band gap (E g) of the resulting In2S3/P3HT is in the range of 2.97-3.71 eV, as measured by UV-visible spectroscopy (UV-Vis) Charge transfer in the In2S3/P3HT was demonstrated by the presence of quenching in the fluorescence spectra of the composite. Chemical composition was investigated by energy dispersive x-ray spectroscopy analysis, as well as x-ray photoelectron spectroscopy. Both techniques demonstrated the formation of In2S3.

  12. Enhanced reverse saturable absorption in graphene/Ag2S organic glasses.

    PubMed

    Ouyang, Qiuyun; Di, Xinpeng; Lei, Zhenyu; Qi, Lihong; Li, Chunyan; Chen, Yujin

    2013-07-14

    G/Ag2S composites were synthesized for the first time by a hydrothermal method. X-ray diffraction, scanning electron microscopy, and transmission electron microscopy analysis demonstrated that Ag2S nanoparticles with a diameter of about 130 nm uniformly covered the graphene surfaces. G/Ag2S composites were dispersed in methyl methacrylate (MMA), polymerized at 75 °C for 30-35 min, and finally dried at 45 °C for 10 h, to afford G/Ag2S/PMMA organic glasses. The nonlinear absorption (NLA) properties of the G/Ag2S/PMMA organic glasses with different amounts of G/Ag2S were investigated by an open-aperture Z-scan technique. The experimental results showed that the G/Ag2S/PMMA organic glass with an appropriate amount of G/Ag2S exhibited enhanced reverse saturable absorption (RSA) properties compared to G/PMMA and Ag2S/PMMA organic glasses, which was attributed to the notable synergistic effects between graphene and Ag2S. Both one-photon absorption (OPA) in Ag2S and two-photon absorption (TPA) in graphene played important roles in RSA processes of the G/Ag2S/PMMA organic glasses. The effective NLA coefficient βeff of the G/Ag2S/PMMA organic glasses was in the order of 10(3) cm GW(-1). Thus this kind of organic glasses have great promise in optical limiter and optical shutter applications. PMID:23715155

  13. Novel 1D coordination polymer {l_brace}Tm(Piv){sub 3{r_brace}n}: Synthesis, structure, magnetic properties and thermal behavior

    SciTech Connect

    Fomina, Irina; Dobrokhotova, Zhanna; Aleksandrov, Grygory; Emelina, Anna; Bykov, Mikhail; Bogomyakov, Artem; Puntus, Lada; Novotortsev, Vladimir; Eremenko, Igor

    2012-01-15

    The new 1D coordination polymer {l_brace}Tm(Piv){sub 3{r_brace}n} (1), where Piv=OOCBu{sup t-}, was synthesized in high yield (>95%) by the reaction of thulium acetate with pivalic acid in air at 100 Degree-Sign S. According to the X-ray diffraction data, the metal atoms in compound 1 are in an octahedral ligand environment unusual for lanthanides. The magnetic and luminescence properties of polymer 1, it's the solid-phase thermal decomposition in air and under argon, and the thermal behavior in the temperature range of -50 Horizontal-Ellipsis +50 Degree-Sign S were investigated. The vaporization process of complex 1 was studied by the Knudsen effusion method combined with mass-spectrometric analysis of the gas-phase composition in the temperature range of 570-680 K. - Graphical Abstract: Novel 1D coordination polymer {l_brace}Tm(Piv){sub 3{r_brace}n} was synthesized and studied by X-ray diffraction. The magnetic, luminescence properties, the thermal behavior and the volatility for the compound {l_brace}Tm(Piv){sub 3{r_brace}n} were investigated. Black-Small-Square Highlights: Black-Right-Pointing-Pointer We synthesized the coordination polymer {l_brace}Tm(Piv){sub 3{r_brace}n}. Black-Right-Pointing-Pointer Tm atoms in polymer have the coordination number 6. Black-Right-Pointing-Pointer Polymer exhibits blue-color emission at room temperature. Black-Right-Pointing-Pointer Polymer shows high thermal stability and volatility. Black-Right-Pointing-Pointer Polymer has no phase transitions in the range of -50 Horizontal-Ellipsis +50 Degree-Sign S.

  14. Novel layered Li3V2(PO4)3/rGO&C sheets as high-rate and long-life lithium ion battery cathodes.

    PubMed

    Wei, Qiulong; Xu, Yanan; Li, Qidong; Tan, Shuangshuang; Ren, Wenhao; An, Qinyou; Mai, Liqiang

    2016-07-01

    Novel layered Li3V2(PO4)3/rGO&C sheets are synthesized by novel interfacial modified assembly, freeze-drying and confined annealing processes. The uniform LVP layers are alternated with rGO&C layers to form the composite layered structure, providing effective electron and ion transport. As a lithium-ion battery cathode, the composite displays excellent electrochemical performance. PMID:27334928

  15. The PI3K regulatory subunit gene PIK3R1 is under direct control of androgens and repressed in prostate cancer cells

    PubMed Central

    Munkley, Jennifer; Livermore, Karen E.; McClurg, Urszula L.; Kalna, Gabriela; Knight, Bridget; McCullagh, Paul; McGrath, John; Crundwell, Malcolm; Leung, Hing Y.; Robson, Craig N.; Harries, Lorna W.; Rajan, Prabhakar; Elliott, David J.

    2015-01-01

    Androgen receptor (AR) signalling and the PI3K pathway mediate survival signals in prostate cancer, and have been shown to regulate each other by reciprocal negative feedback, such that inhibition of one activates the other. Understanding the reciprocal regulation of these pathways is important for disease management as tumour cells can adapt and survive when either single pathway is inhibited pharmacologically. We recently carried out genome-wide exon-specific profiling of prostate cancer cells to identify novel androgen-regulated transcriptional events. Here we interrogated this dataset for novel androgen-regulated genes associated with the PI3K pathway. We find that the PI3K regulatory subunits PIK3R1 (p85α) and PIK3R3 (p55γ) are direct targets of the AR which are rapidly repressed by androgens in LNCaP cells. Further characterisation revealed that the PIK3CA p110α catalytic subunit is also indirectly regulated by androgens at the protein level. We show that PIK3R1 mRNA is significantly under-expressed in prostate cancer (PCa) tissue, and provide data to suggest a context-dependent regulatory mechanism whereby repression of the p85α protein by the AR results in destabilisation of the PI3K p110α catalytic subunit and downstream PI3K pathway inhibition that functionally affects the properties of prostate cancer cells. PMID:26501081

  16. A novel model for the (√3 × √3)R30° alkanethiolate-Au(111) phase based on alkanethiolate-Au adatom complexes.

    PubMed

    Carro, P; Torrelles, X; Salvarezza, R C

    2014-09-21

    Self-assembled monolayers of thiols on Au(111) have attracted considerable interest from the theoretical and experimental points of view as model systems for understanding the organization of molecules on metallic surfaces, and also as key elements in nanoscience and nanotechnology. Today, there is strong theoretical and experimental evidence indicating that the surface chemistry of these monolayers at high coverage involves dithiolate-adatom (RS-Auad-SR) species, showing the existence of the (3 × 4) and c(4 × 2) lattices usually observed by scanning tunneling microscopy. However, concealing the existence of dithiolate-Au adatom species with the presence of the paradigmatic (√3 × √3)R30° lattice, which dominates the structure of long alkanethiols, still remains a challenge. Here, we propose a novel (3√3 × 3√3)R30° structural model containing RS-Auad-SR moieties based on DFT calculations which reconciles most of the experimental data observed for the (√3 × √3)R30° lattice. Our results provide a unified picture of the surface chemistry of the thiol-Au(111) system. PMID:25093279

  17. Phosphorylation of BK channels modulates the sensitivity to hydrogen sulfide (H2S)

    PubMed Central

    Sitdikova, Guzel F.; Fuchs, Roman; Kainz, Verena; Weiger, Thomas M.; Hermann, Anton

    2014-01-01

    Introduction: Gases, such as nitric oxide (NO), carbon monoxide (CO), or hydrogen sulfide (H2S), termed gasotransmitters, play an increasingly important role in understanding of how electrical signaling of cells is modulated. H2S is well-known to act on various ion channels and receptors. In a previous study we reported that H2S increased calcium-activated potassium (BK) channel activity. Aims: The goal of the present study is to investigate the modulatory effect of BK channel phosphorylation on the action of H2S on the channel as well as to recalculate and determine the H2S concentrations in aqueous sodium hydrogen sulfide (NaHS) solutions. Methods: Single channel recordings of GH3, GH4, and GH4 STREX cells were used to analyze channel open probability, amplitude, and open dwell times. H2S was measured with an anion selective electrode. Results: The concentration of H2S produced from NaHS was recalculated taking pH, temperature salinity of the perfusate, and evaporation of H2S into account. The results indicate that from a concentration of 300 μM NaHS, only 11–13%, i.e., 34–41 μM is effective as H2S in solution. GH3, GH4, and GH4 STREX cells respond differently to phosphorylation. BK channel open probability (Po) of all cells lines used was increased by H2S in ATP-containing solutions. PKA prevented the action of H2S on channel Po in GH4 and GH4 STREX, but not in GH3 cells. H2S, high significantly increased Po of all PKG pretreated cells. In the presence of PKC, which lowers channel activity, H2S increased channel Po of GH4 and GH4 STREX, but not those of GH3 cells. H2S increased open dwell times of GH3 cells in the absence of ATP significantly. A significant increase of dwell times with H2S was also observed in the presence of okadaic acid. Conclusions: Our results suggest that phosphorylation by PKG primes the channels for H2S activation and indicate that channel phosphorylation plays an important role in the response to H2S. PMID:25429270

  18. Slow formation of [3Fe-4S](1+) clusters in mutant forms of Desulfovibrio africanus ferredoxin III.

    PubMed

    Hannan, J P; Busch, J L; James, R; Thomson, A J; Moore, G R; Davy, S L

    2000-02-25

    Desulfovibrio africanus ferredoxin III (Da FdIII) readily interconverts between a 7Fe and an 8Fe form with Asp-14 believed to provide a cluster ligand in the latter form. To investigate the factors important for cluster interconversion in Fe/S cluster-containing proteins we have studied two variants of Da FdIII produced by site-directed mutagenesis, Asp14Glu and Asp14His, with cluster incorporation performed in vitro. Characterisation of these proteins by UV/visible, EPR and (1)H NMR spectroscopies revealed that the formation of the stable 7Fe form of these proteins takes some time to occur. Evidence is presented which indicates the [4Fe-4S](2+) cluster is incorporated prior to the [3Fe-4S](1+) cluster. PMID:10692579

  19. A convenient ligand exchange pathway to [2Fe-2S] ferredoxin analogues.

    PubMed

    Ballmann, Joachim; Sun, Xianru; Dechert, Sebastian; Schneider, Benjamin; Meyer, Franc

    2009-07-01

    The benzanellated analogues (NEt(4))(2)[Fe(2)S(2)(indolate)(4)] (2) and (NEt(4))(2)[Fe(2)S(2)(carbazolate)(4)] (3) of the previously reported parent (NEt(4))(2)[Fe(2)S(2)(pyrrolate)(4)] cluster (1) were synthesized and characterized spectroscopically. In contrast to 1 and 3, compound 2 can be applied as a versatile precursor in ligand exchange reactions with various thiophenols affording the thiophenolate-coordinate [2Fe-2S] clusters. Heteroaromatic thiols and chelating biphenols are suitable substrates in this conversion as well, providing a convenient access to a variety of new [2Fe-2S] ferredoxin analogues and related complexes. Several new S- and O-coordinate [2Fe-2S] clusters have been prepared and fully characterized, including five X-ray crystal structures. PMID:19662283

  20. Synthesis of Ag(2) S-Ag nanoprisms and their use as DNA hybridization probes.

    PubMed

    Liu, Bing; Ma, Zhanfang

    2011-06-01

    A simple synthetic route to prepare Ag(2) S-Ag nanoprisms consists of the facile addition of Na(2) S to a solution of triangular Ag nanoprisms. The resulting Ag(2) S-Ag nanoparticles are more stable in solution than the original Ag nanoprisms, and two surface plasmon resonance (SPR) bands of the original Ag nanoprisms still remain. In addition, the SPR bands of the Ag(2) S-Ag nanoprisms are tunable over a wide range. The Ag(2) S-Ag nanoprisms can be directly bioconjugated via well-established stable Ag(2) S surface chemistry with readily available sulfur coupling agents. The nanoprisms are used in the hybridization of functionalized oligonucleotides, and show promise as probes for future biosensing applications. PMID:21538868

  1. Enhanced field emission properties of ZnO-Ag2S core-shell heterojunction nanowires.

    PubMed

    Wang, Guojing; Li, Mingyang; Chen, Chienhua; Lv, Shasha; Liao, Jiecui; Li, Zhengcao

    2016-06-01

    A simple approach to Ag2S quantum dot (QD) modification was used to tune the field emission (FE) properties of ZnO nanowire arrays (NWAs). By a simple and facile successive ionic layer adsorption and reaction (SILAR) approach, Ag2S QDs were uniformly and densely packed on ZnO nanowires (NWs) to form ZnO-Ag2S core-shell heterojunction structures. The FE properties of ZnO NWAs were effectively tuned by controlling the amount of Ag2S QDs. The turn-on field first reduces and then increases as the amount of Ag2S QDs increases, while the trend of the field-enhancement factor is inverse. This is attributed to the clustering of Ag2S QDs into nanoparticles (NPs) which cover the nanowire tips, as SILAR cycles increase. PMID:27142998

  2. Li2S cathode modified with polyvinylpyrrolidone and mechanical milling with carbon

    NASA Astrophysics Data System (ADS)

    Liu, Jun; Nara, Hiroki; Yokoshima, Tokihiko; Momma, Toshiyuki; Osaka, Tetsuya

    2015-01-01

    Polyvinylpyrrolidone (PVP) is used with polyethylene oxide (PEO) as a mixed binder for mechanically milled Li2S. PVP demonstrates its advantage in terms of increasing the capacity of Li2S, but boosts the potential barrier at the beginning of the first charge. It is also revealed that PVP retards the charge-transfer kinetics of Li2S. In Li2S-C prepared by mechanical milling, carbon compensates for the electrochemical insulation of the PVP binder and improves the cycle stability. As a result, the Li2S-C-PVP electrode with 60 wt% Li2S content displays a low potential barrier at the onset of charge and a stable capacity of about 460 mAh g-1 at 0.1 C.

  3. Variations in O-antigen biosynthesis and O-acetylation associated with altered phage sensitivity in Escherichia coli 4s.

    PubMed

    Knirel, Yuriy A; Prokhorov, Nikolai S; Shashkov, Alexander S; Ovchinnikova, Olga G; Zdorovenko, Evelina L; Liu, Bin; Kostryukova, Elena S; Larin, Andrey K; Golomidova, Alla K; Letarov, Andrey V

    2015-03-01

    The O polysaccharide of the lipopolysaccharide (O antigen) of Gram-negative bacteria often serves as a receptor for bacteriophages that can make the phage dependent on a given O-antigen type, thus supporting the concept of the adaptive significance of the O-antigen variability in bacteria. The O-antigen layer also modulates interactions of many bacteriophages with their hosts, limiting the access of the viruses to other cell surface receptors. Here we report variations of O-antigen synthesis and structure in an environmental Escherichia coli isolate, 4s, obtained from horse feces, and its mutants selected for resistance to bacteriophage G7C, isolated from the same fecal sample. The 4s O antigen was found to be serologically, structurally, and genetically related to the O antigen of E. coli O22, differing only in side-chain α-D-glucosylation in the former, mediated by a gtr locus on the chromosome. Spontaneous mutations of E. coli 4s occurring with an unusually high frequency affected either O-antigen synthesis or O-acetylation due to the inactivation of the gene encoding the putative glycosyltransferase WclH or the putative acetyltransferase WclK, respectively, by the insertion of IS1-like elements. These mutations induced resistance to bacteriophage G7C and also modified interactions of E. coli 4s with several other bacteriophages conferring either resistance or sensitivity to the host. These findings suggest that O-antigen synthesis and O-acetylation can both ensure the specific recognition of the O-antigen receptor following infection by some phages and provide protection of the host cells against attack by other phages. PMID:25512310

  4. AU4S: A novel synthetic peptide to measure the activity of ATG4 in living cells

    PubMed Central

    Ni, Zhenhong; Gong, Yi; Dai, Xufang; Ding, Wen; Wang, Bin; Gong, Haiyan; Qin, Liyan; Cheng, Panke; Li, Song; Lian, Jiqin; He, Fengtian

    2015-01-01

    ATG4 plays a key role in autophagy induction, but the methods for monitoring ATG4 activity in living cells are limited. Here we designed a novel fluorescent peptide named AU4S for noninvasive detection of ATG4 activity in living cells, which consists of the cell-penetrating peptide (CPP), ATG4-recognized sequence “GTFG,” and the fluorophore FITC. Additionally, an ATG4-resistant peptide AG4R was used as a control. CPP can help AU4S or AG4R to penetrate cell membrane efficiently. AU4S but not AG4R can be recognized and cleaved by ATG4, leading to the change of fluorescence intensity. Therefore, the difference between AU4S- and AG4R-measured fluorescence values in the same sample, defined as “F-D value,” can reflect ATG4 activity. By detecting the F-D values, we found that ATG4 activity paralleled LC3B-II levels in rapamycin-treated cells, but neither paralleled LC3B-II levels in starved cells nor presented a correlation with LC3B-II accumulation in WBCs from healthy donors or leukemia patients. However, when DTT was added to the system, ATG4 activity not only paralleled LC3B-II levels in starved cells in the presence or absence of autophagy inhibitors, but also presented a positive correlation with LC3B-II accumulation in WBCs from leukemia patients (R2 = 0.5288). In conclusion, this study provides a convenient, rapid, and quantitative method to monitor ATG4 activity in living cells, which may be beneficial to basic and clinical research on autophagy. PMID:25831015

  5. AU4S: a novel synthetic peptide to measure the activity of ATG4 in living cells.

    PubMed

    Ni, Zhenhong; Gong, Yi; Dai, Xufang; Ding, Wen; Wang, Bin; Gong, Haiyan; Qin, Liyan; Cheng, Panke; Li, Song; Lian, Jiqin; He, Fengtian

    2015-01-01

    ATG4 plays a key role in autophagy induction, but the methods for monitoring ATG4 activity in living cells are limited. Here we designed a novel fluorescent peptide named AU4S for noninvasive detection of ATG4 activity in living cells, which consists of the cell-penetrating peptide (CPP), ATG4-recognized sequence "GTFG," and the fluorophore FITC. Additionally, an ATG4-resistant peptide AG4R was used as a control. CPP can help AU4S or AG4R to penetrate cell membrane efficiently. AU4S but not AG4R can be recognized and cleaved by ATG4, leading to the change of fluorescence intensity. Therefore, the difference between AU4S- and AG4R-measured fluorescence values in the same sample, defined as "F-D value," can reflect ATG4 activity. By detecting the F-D values, we found that ATG4 activity paralleled LC3B-II levels in rapamycin-treated cells, but neither paralleled LC3B-II levels in starved cells nor presented a correlation with LC3B-II accumulation in WBCs from healthy donors or leukemia patients. However, when DTT was added to the system, ATG4 activity not only paralleled LC3B-II levels in starved cells in the presence or absence of autophagy inhibitors, but also presented a positive correlation with LC3B-II accumulation in WBCs from leukemia patients (R(2) = 0.5288). In conclusion, this study provides a convenient, rapid, and quantitative method to monitor ATG4 activity in living cells, which may be beneficial to basic and clinical research on autophagy. PMID:25831015

  6. Characterization of [4Fe-4S]-containing and cluster-free forms of Streptomyces WhiD

    PubMed Central

    Crack, Jason C.; den Hengst, Chris D.; Jakimowicz, Piotr; Subramanian, Sowmya; Johnson, Michael K.; Buttner, Mark J.; Thomson, Andrew J.; Le Brun, Nick E.

    2009-01-01

    WhiD, a member of the WhiB-like (Wbl) family of iron-sulfur proteins found exclusively within the actinomycetes, is required for the late stages of sporulation in Streptomyces coelicolor. Like all other Wbl proteins, WhiD has not so far been purified in a soluble form that contains a significant amount of cluster and characterization has relied on cluster-reconstituted protein. Thus, a major goal in Wbl research is to obtain and characterize native protein containing iron-sulfur clusters. Here we report the analysis of S. coelicolor WhiD purified anaerobically from E. coli as a soluble protein containing a single [4Fe-4S]2+ cluster ligated by four cysteines. Upon exposure to oxygen, spectral features associated with the [4Fe-4S] cluster were lost in a slow reaction that unusually yielded apo-WhiD directly without significant concentrations of cluster intermediates. This process was found to be highly pH dependent with an optimal stability observed between pH 7.0 and 8.0. Low molecular weight thiols, including a mycothiol analogue and thioredoxin, exerted a small but significant protective effect against WhiD cluster loss, an activity that could be of physiological importance. [4Fe-4S]2+ WhiD was found to react much more rapidly with superoxide than with either oxygen or hydrogen peroxide, which may also be of physiological significance. Loss of the [4Fe-4S] cluster to form apo-protein destabilized the protein fold significantly, but did not lead to complete unfolding. Finally, apo-WhiD exhibited negligible activity in an insulin-based disulfide reductase assay demonstrating that it does not function as a general protein disulfide reductase. PMID:19954209

  7. Nqrs Data for C8H8Cl3N3O4S2 (Subst. No. 1087)

    NASA Astrophysics Data System (ADS)

    Chihara, H.; Nakamura, N.

    This document is part of Subvolume A `Substances Containing Ag … C10H15' of Volume 48 `Nuclear Quadrupole Resonance Spectroscopy Data' of Landolt-Börnstein - Group III `Condensed Matter'. It contains an extract of Section `3.2 Data tables' of the Chapter `3 Nuclear quadrupole resonance data' providing the NQRS data for C8H8Cl3N3O4S2 (Subst. No. 1087)

  8. A Cu4S Model for the Nitrous Oxide Reductase Active Sites Supported Only by Nitrogen Ligands†

    PubMed Central

    Johnson, Brittany J.; Antholine, William E.; Lindeman, Sergey V.; Mankad, Neal P.

    2016-01-01

    To model the (His)7Cu4Sn (n = 1 or 2) active sites of nitrous oxide reductase, the first Cu4(μ4-S) cluster supported only by nitrogen donors has been prepared using amidinate supporting ligands. Structural, magnetic, spectroscopic, and computational characterization is reported. Electrochemical data indicates that the 2-hole model complex can be reduced reversibly to the 1-hole state and irreversibly to the fully reduced state. PMID:26111160

  9. A Cu4S model for the nitrous oxide reductase active sites supported only by nitrogen ligands.

    PubMed

    Johnson, Brittany J; Antholine, William E; Lindeman, Sergey V; Mankad, Neal P

    2015-07-28

    To model the (His)7Cu4Sn (n = 1 or 2) active sites of nitrous oxide reductase, the first Cu4(μ4-S) cluster supported only by nitrogen donors has been prepared using amidinate supporting ligands. Structural, magnetic, spectroscopic, and computational characterization is reported. Electrochemical data indicates that the 2-hole model complex can be reduced reversibly to the 1-hole state and irreversibly to the fully reduced state. PMID:26111160

  10. Study of Y(3S, 2S)-> eta Y(1S) and Y(3S, 2S) -> pi pi- Y(1S) Hadronic Transitions

    SciTech Connect

    Lees, J.P.; Poireau, V.; Tisserand, V.; Garra Tico, J.; Grauges, E.; Martinelli, M.; Milanes, D.A.; Palano, A.; Pappagallo, M.; Eigen, G.; Stugu, B.; Brown, D.N.; Kerth, L.T.; Kolomensky, Yu.G.; Lynch, G.; Koch, H.; Schroeder, T.; Asgeirsson, D.J.; Hearty, C.; Mattison, T.S.; McKenna, J.A.; /British Columbia U. /Brunel U. /Novosibirsk, IYF /UC, Irvine /UC, Riverside /UC, Santa Barbara /UC, Santa Cruz /Caltech /Cincinnati U. /Colorado U. /Colorado State U. /Dortmund U. /Dresden, Tech. U. /Ecole Polytechnique /Edinburgh U. /INFN, Ferrara /INFN, Ferrara /Ferrara U. /INFN, Ferrara /Frascati /INFN, Genoa /Genoa U. /INFN, Genoa /INFN, Genoa /Genoa U. /INFN, Genoa /Indian Inst. Tech., Guwahati /Harvard U. /Harvey Mudd Coll. /Heidelberg U. /Humboldt U., Berlin /Imperial Coll., London /Iowa State U. /Iowa State U. /Johns Hopkins U. /Paris U., VI-VII /LLNL, Livermore /Liverpool U. /Queen Mary, U. of London /Royal Holloway, U. of London /Royal Holloway, U. of London /Louisville U. /Mainz U., Inst. Kernphys. /Manchester U. /Maryland U. /Massachusetts U., Amherst /MIT /McGill U. /INFN, Milan /Milan U. /INFN, Milan /INFN, Milan /Milan U. /Mississippi U. /Montreal U. /INFN, Naples /Naples U. /NIKHEF, Amsterdam /NIKHEF, Amsterdam /Notre Dame U. /Ohio State U. /Oregon U. /INFN, Padua /Padua U. /INFN, Padua /INFN, Padua /Padua U. /Paris U., VI-VII /INFN, Perugia /Perugia U. /INFN, Pisa /Pisa U. /INFN, Pisa /Pisa, Scuola Normale Superiore /INFN, Pisa /Pisa U. /INFN, Pisa /INFN, Pisa /Pisa U. /INFN, Pisa /Princeton U. /INFN, Rome /INFN, Rome /Rome U. /INFN, Rome /INFN, Rome /Rome U. /INFN, Rome /Rostock U. /Rutherford /DAPNIA, Saclay /SLAC /South Carolina U. /Southern Methodist U. /Stanford U., Phys. Dept. /SUNY, Albany /Tel Aviv U. /Tennessee U. /Texas Nuclear Corp., Austin /Texas U., Dallas /INFN, Turin /Turin U. /INFN, Trieste /Trieste U. /Valencia U. /Victoria U. /Warwick U. /Wisconsin U., Madison

    2012-03-27

    We study the {Upsilon}(3S, 2S) {yields} {eta}{Upsilon}(1S) and {Upsilon}(3S, 2S) {yields} {pi}{sup +}{pi}{sup -}{Upsilon}(1S) transitions with 122 x 10{sup 6} {Upsilon}(3S) and 100 x 10{sup 6} {Upsilon}(2S) mesons collected by the BABAR detector at the PEP-II asymmetric-energy e{sup +}e{sup -} collider. We measure {Beta}[{Upsilon}(2S) {yields} {eta}{Upsilon}(1S)] = (2.39 {+-} 0.31(stat.) {+-} 0.14(syst.)) x 10{sup -4} and {Lambda}[{Upsilon}(2S) {yields} {eta}{Upsilon}(1S)]/{Lambda}[{Upsilon}(2S) {yields} {pi}{sup +}{pi}{sup -}{Upsilon}(1S)] = (1.35 {+-} 0.17(stat.) {+-} 0.08(syst.)) x 10{sup -3}. We find no evidence for {Upsilon}(3S) {yields} {eta}{Upsilon}(1S) and obtain {Beta}[{Upsilon}(3S) {yields} {eta}{Upsilon}(1S)] < 1.0 x 10{sup -4} and {Lambda}[{Upsilon}(3S) {yields} {eta}{Upsilon}(1S)]/{Lambda}[{Upsilon}(3S) {yields} {pi}{sup +}{pi}{sup -}{Upsilon}(1S)] < 2.3 x 10{sup -3} as upper limits at the 90% confidence level. We also provide improved measurements of the {Upsilon}(2S)-{Upsilon}(1S) and {Upsilon}(3S)-{Upsilon}(1S) mass differences, 562.170 {+-} 0.007(stat.) {+-} 0.088(syst.)MeV/c{sup 2} and 893.813 {+-} 0.015(stat.) {+-} 0.107(syst.)MeV/c{sup 2}, respectively.

  11. Isomerization and fragmentation of acetonitrile upon interaction with N(4S) atoms: the chemistry of nitrogen in dense molecular clouds

    NASA Astrophysics Data System (ADS)

    Mencos, Alejandro; Krim, Lahouari

    2016-08-01

    We experimentally show that the reaction between ground state nitrogen atoms N(4S) and acetonitrile CH3CN can lead to two distinct chemical pathways that are both thermally activated at very low temperatures. First is CH3CN isomerization which produces CH3NC and H2CCNH. Second is CH3CN decomposition which produces HNC and CH3CNH+CN- fragments, with the possible release of H2. Our results reveal that the mobility of N(4S)-atoms is stimulated in the 3-11 K temperature range, and that its subsequent encounter with one acetonitrile molecule is sufficient for the aforementioned reactions to occur without the need for additional energy to be supplied to the CH3CN + N(4S) system. These findings shed more light on the nitrogen chemistry that can possibly take place in dense molecular clouds, which until now was thought to only involve high-energy processes and therefore be unlikely to occur in such cold and dark interstellar regions. The reaction pathways we propose in this study have very important astrochemical implications, as it was shown recently that the atomic nitrogen might be more abundant, in many interstellar icy grain mantles, than previously thought. Also, these reaction pathways can now be considered within dense molecular clouds, and possibly affect the branching ratios for N-bearing molecules computed in astrochemical modelling.

  12. Tyrosine Residues from the S4-S5 Linker of Kv11.1 Channels Are Critical for Slow Deactivation.

    PubMed

    Ng, Chai-Ann; Gravel, Andrée E; Perry, Matthew D; Arnold, Alexandre A; Marcotte, Isabelle; Vandenberg, Jamie I

    2016-08-12

    Slow deactivation of Kv11.1 channels is critical for its function in the heart. The S4-S5 linker, which joins the voltage sensor and pore domains, plays a critical role in this slow deactivation gating. Here, we use NMR spectroscopy to identify the membrane-bound surface of the S4S5 linker, and we show that two highly conserved tyrosine residues within the KCNH subfamily of channels are membrane-associated. Site-directed mutagenesis and electrophysiological analysis indicates that Tyr-542 interacts with both the pore domain and voltage sensor residues to stabilize activated conformations of the channel, whereas Tyr-545 contributes to the slow kinetics of deactivation by primarily stabilizing the transition state between the activated and closed states. Thus, the two tyrosine residues in the Kv11.1 S4S5 linker play critical but distinct roles in the slow deactivation phenotype, which is a hallmark of Kv11.1 channels. PMID:27317659

  13. Synthesis and properties of CrLn/sub 4/S/sub 7/ compounds (Ln = Gd-Lu)

    SciTech Connect

    Aliev, O.M.; Imanova, T.V.; Khasaev, G.G.; Kurbanov, T.K.

    1986-06-01

    The yttrium ions in the Y/sub 5/S/sub 7/ lattice are found in the di- and trivalent states. The authors replaced a portion of the divalent yttrium ions by divalent Cd, Cr, Eu, Yb, Fe, Co and Ni ions and the trivalent yttrium ions were replaced by other trivalent rare earth ions. Alloys were synthesized for M - Cd, Zn, Eu, Yb, Cr, and Ni. A detailed x-ray diffraction study shows that two structural types are characteristic for MLn/sub 4/S/sub 7/ and MLn/sub 4/Se/sub 7/. All of these compounds have p-type conductivity. The specific electrical conductance and thermoelectromatic force are 0.70 S/cm and 25 microv for CrLa/sub 4/S/sub 7/ at 300 K, while the analogous values for CrCe/sub 4/S/sub 7/ are 0.47 S/cm and 13 microV.

  14. State-of-health monitoring of 18650 4S packs with a single-point impedance diagnostic

    NASA Astrophysics Data System (ADS)

    Love, Corey T.; Virji, Maheboob B. V.; Rocheleau, Richard E.; Swider-Lyons, Karen E.

    2014-11-01

    The state-of-health (SOH) of Li-ion batteries and battery packs must be monitored effectively for abuse to prevent failure and accidents. In a previous publication, we described a single-point impedance diagnostic method for detecting damage in single prismatic lithium polymer rechargeable cells subjected to overcharge abuse. We now determine whether the single-point impedance diagnostic method is applicable to 4S battery packs. At 316 Hz, commercial 18650 LiCoO2 cells are determined to have the least change in impedance response when cycled between 3.0 and 4.2 V, for states-of-charge (SOC) of 0-100%. The impedance response of single cells at 316 Hz changes dramatically during overcharge (SOC = 125%), presumably due to change in their solid electrolyte interface (SEI) layers at the electrodes. When a single cell is purposely subjected to such overcharge abuse and then integrated into a 4S pack with 3 other healthy cells, the impedance response of the 4S pack at 316 Hz also changes, despite variances in the impedance response of each of the 3 healthy cells. The results suggest that this single-point impedance method could serve as a diagnostic in an all-inclusive battery management system to identify overcharge abuse of single cells without individual cell monitoring.

  15. Li2S encapsulated by nitrogen-doped carbon for lithium sulfur batteries

    DOE PAGESBeta

    Chen, Lin; Liu, Yuzi; Ashuri, Maziar; Liu, Caihong; Shaw, Leon L.

    2014-09-26

    Using high-energy ball milling of the Li2S plus carbon black mixture followed by carbonization of pyrrole, we have established a facile approach to synthesize Li2S-plus-C composite particles of average size 400 nm, encapsulated by a nitrogen-doped carbon shell. Such an engineered core–shell structure exhibits an ultrahigh initial discharge specific capacity (1029 mAh/g), reaching 88% of the theoretical capacity (1,166 mAh/g of Li2S) and thus offering the highest utilization of Li2S in the cathode among all of the reported works for the encapsulated Li2S cathodes. This Li2S/C composite core with a nitrogen-doped carbon shell can still retain 652 mAh/g after prolongedmore » 100 cycles. These superior properties are attributed to the nitrogen-doped carbon shell that can improve the conductivity to enhance the utilization of Li2S in the cathode. As a result, fine particle sizes and the presence of carbon black within the Li2S core may also play a role in high utilization of Li2S in the cathode.« less

  16. Roles of H2S in adaptation of alpine plants Lamiophlomis rotata to altitude gradients.

    PubMed

    Ma, Lan; Yang, Yongping; Hu, Xiangyang

    2015-01-01

    Hydrogen sulfide (H2S) is an important gaseous transmitter in organisims. It widespreads in the organs and tissues of animals and participates in the biological process of cardiovascular relaxation, cell apoptosis and protection, inflammation and neuromodulation. H2S also can be synthesized in plants system and is involved in stress responses and the biological process of growth and development. This review describes the synthesis and biological function of H2S in plants. Based on our research for the adaptation of Lamiophlomis rotata to different altitude gradients, we firstly proposed H2S plays an important role in the adaptation of Lamiophlomis rotata to alpine environment. PMID:26786014

  17. Roles of H2S in adaptation of alpine plants Lamiophlomis rotata to altitude gradients

    PubMed Central

    Ma, Lan; Yang, Yongping; Hu, Xiangyang

    2015-01-01

    Hydrogen sulfide (H2S) is an important gaseous transmitter in organisims. It widespreads in the organs and tissues of animals and participates in the biological process of cardiovascular relaxation, cell apoptosis and protection, inflammation and neuromodulation. H2S also can be synthesized in plants system and is involved in stress responses and the biological process of growth and development. This review describes the synthesis and biological function of H2S in plants. Based on our research for the adaptation of Lamiophlomis rotata to different altitude gradients, we firstly proposed H2S plays an important role in the adaptation of Lamiophlomis rotata to alpine environment. PMID:26786014

  18. Reactions of State-Selected Atomic Oxygen Ions O(+)((4)S, (2)D, (2)P) with Methane.

    PubMed

    Cunha de Miranda, Barbara; Romanzin, Claire; Chefdeville, Simon; Vuitton, Véronique; Žabka, Jan; Polášek, Miroslav; Alcaraz, Christian

    2015-06-11

    An experimental study has been carried out on the reactions of state selected O(+)((4)S, (2)D, (2)P) ions with methane with the aims of characterizing the effects of both the parent ion internal energy and collision energy on the reaction dynamics and determining the fate of oxygen species in complex media, in particular the Titan ionosphere. Absolute cross sections and product velocity distributions have been determined for the reactions of (16)O(+) or (18)O(+) ions with CH4 or CD4 from thermal to 5 eV collision energies by using the guided ion beam (GIB) technique. Dissociative photoionization of O2 with vacuum ultraviolet (VUV) synchrotron radiation delivered by the DESIRS beamline at the SOLEIL storage ring and the threshold photoion photoelectron coincidence (TPEPICO) technique are used for the preparation of purely state-selected O(+)((4)S, (2)D, (2)P) ions. A complete inversion of the product branching ratio between CH4(+) and CH3(+) ions in favor of the latter is observed for excitation of O(+) ions from the (4)S ground state to either the (2)D or the (2)P metastable state. CH4(+) and CH3(+) ions, which are by far the major products for the reaction of ground state and excited states, are strongly backward scattered in the center of mass frame relative to O(+) parent ions. For the reaction of O(+)((4)S), CH3(+) production also rises with increasing collision energy but with much less efficiency than with O(+) excitation. We found that a mechanism of dissociative charge transfer, mediated by an initial charge transfer step, can account very well for all the observations, indicating that CH3(+) production is associated with the formation of H and O atoms (CH3(+) + H + O) rather than with OH formation by an hydride transfer process (CH3(+) + OH). Therefore, as the CH4(+) production by charge transfer is also associated with O atoms, the fate of oxygen species in these reactions is essentially the O production, except for the reaction of O(+)((4)S), which also

  19. Elevated-Temperature Corrosion of CoCrCuFeNiAl0.5Bx High-Entropy Alloys in Simulated Syngas Containing H2S

    SciTech Connect

    Dogan, Omer N; Nielsen, Benjamin C; Hawk, Jeffrey A

    2013-08-01

    High-entropy alloys are formed by synthesizing five or more principal elements in equimolar or near equimolar concentrations. Microstructure of the CoCrCuFeNiAl{sub 0.5}B{sub x} (x = 0, 0.2, 0.6, 1) high-entropy alloys under investigation is composed of a mixture of disordered bcc and fcc phases and borides. These alloys were tested gravimetrically for their corrosion resistance in simulated syngas containing 0, 0.01, 0.1, and 1 % H{sub 2}S at 500 °C. The exposed coupons were characterized using XRD and SEM. No significant corrosion was detected at 500 °C in syngas containing 0 and 0.01 % H{sub 2}S while significant corrosion was observed in syngas containing 0.1 and 1 % H{sub 2}S. Cu{sub 1.96}S was the primary sulfide in the external corrosion scale on the low-boron high-entropy alloys, whereas FeCo{sub 4}Ni{sub 4}S{sub 8} on the high-boron high-entropy alloys. Multi-phase Cu-rich regions in the low-B high-entropy alloys were vulnerable to corrosive attack.

  20. Analysis of erectile responses to H2S donors in the anesthetized rat.

    PubMed

    Jupiter, Ryan C; Yoo, Daniel; Pankey, Edward A; Reddy, Vishwaradh V G; Edward, Justin A; Polhemus, David J; Peak, Taylor C; Katakam, Prasad; Kadowitz, Philip J

    2015-09-01

    Hydrogen sulfide (H2S) is a biologically active endogenous gasotransmitter formed in penile tissue that has been shown to relax isolated cavernosal smooth muscle. In the present study, erectile responses to the H2S donors sodium sulfide (Na2S) and sodium hydrosulfide (NaHS) were investigated in the anesthetized rat. Intracavernosal injections of Na2S in doses of 0.03-1 mg/kg increased intracavernosal pressure and transiently decreased mean arterial pressure in a dose-dependent manner. Blood pressure responses to Na2S were rapid in onset and short in duration. Responses to Na2S and NaHS were similar at doses up to 0.3 mg/kg, after which a plateau in the erectile response to NaHS was reached. Increases in intracavernosal pressure in response to Na2S were attenuated by tetraethylammonium (K(+) channel inhibitor) and iberiotoxin (large-conductance Ca(2+)-activated K(+) channel inhibitor), whereas glybenclamide [ATP-sensitive K(+) (KATP) channel inhibitor] and inhibitors of nitric oxide (NO) synthase, cyclooxygenase, and cytochrome P-450 epoxygenase had no effect. These data indicate that erectile responses to Na2S are mediated by a tetraethylammonium- and iberiotoxin-sensitive mechanism and that KATP channels, NO, or arachidonic acid metabolites are not involved. Na2S did not alter erectile responses to sodium nitroprusside (NO donor) or cavernosal nerve stimulation, indicating that neither NO nor cGMP metabolism are altered. Thus, Na2S has erectile activity mediated by large-conductance Ca(2+)-activated K(+) channels. It is suggested that strategies that increase H2S formation in penile tissue may be useful in the treatment of erectile dysfunction when NO bioavailability, KATP channel function, or poor responses to PGE1 are present. PMID:26116713

  1. Cardioprotection by H2S Donors: Nitric Oxide-Dependent and ‑Independent Mechanisms.

    PubMed

    Chatzianastasiou, Athanasia; Bibli, Sofia-Iris; Andreadou, Ioanna; Efentakis, Panagiotis; Kaludercic, Nina; Wood, Mark E; Whiteman, Matthew; Di Lisa, Fabio; Daiber, Andreas; Manolopoulos, Vangelis G; Szabó, Csaba; Papapetropoulos, Andreas

    2016-09-01

    Hydrogen sulfide (H2S) is a signaling molecule with protective effects in the cardiovascular system. To harness the therapeutic potential of H2S, a number of donors have been developed. The present study compares the cardioprotective actions of representative H2S donors from different classes and studies their mechanisms of action in myocardial injury in vitro and in vivo. Exposure of cardiomyocytes to H2O2 led to significant cytotoxicity, which was inhibited by sodium sulfide (Na2S), thiovaline (TV), GYY4137 [morpholin-4-ium 4 methoxyphenyl(morpholino) phosphinodithioate], and AP39 [(10-oxo-10-(4-(3-thioxo-3H-1,2-dithiol5yl)phenoxy)decyl) triphenylphospho-nium bromide]. Inhibition of nitric oxide (NO) synthesis prevented the cytoprotective effects of Na2S and TV, but not GYY4137 and AP39, against H2O2-induced cardiomyocyte injury. Mice subjected to left anterior descending coronary ligation were protected from ischemia-reperfusion injury by the H2S donors tested. Inhibition of nitric oxide synthase (NOS) in vivo blocked only the beneficial effect of Na2S. Moreover, Na2S, but not AP39, administration enhanced the phosphorylation of endothelial NOS and vasodilator-associated phosphoprotein. Both Na2S and AP39 reduced infarct size in mice lacking cyclophilin-D (CypD), a modulator of the mitochondrial permeability transition pore (PTP). Nevertheless, only AP39 displayed a direct effect on mitochondria by increasing the mitochondrial Ca(2+) retention capacity, which is evidence of decreased propensity to undergo permeability transition. We conclude that although all the H2S donors we tested limited infarct size, the pathways involved were not conserved. Na2S had no direct effects on PTP opening, and its action was nitric oxide dependent. In contrast, the cardioprotection exhibited by AP39 could result from a direct inhibitory effect on PTP acting at a site different than CypD. PMID:27342567

  2. Search for charmonium and charmoniumlike states in {Upsilon}(2S) radiative decays

    SciTech Connect

    Wang, X. L.; Yuan, C. Z.; Wang, P.; Shen, C. P.; Hayasaka, K.; Iijima, T.; Miyazaki, Y.; Ohshima, T.; Senyo, K.; Seon, O.; Adachi, I.; Haba, J.; Itoh, R.; Iwasaki, Y.; Katayama, N.; Kichimi, H.; Nakao, M.; Nishida, S.; Sakai, Y.; Trabelsi, K.

    2011-10-01

    Using a sample of 158x10{sup 6} {Upsilon}(2S) events collected with the Belle detector, charmonium and charmoniumlike states with even charge parity are searched for in {Upsilon}(2S) radiative decays. No significant {chi}{sub cJ} or {eta}{sub c} signal is observed, and the following upper limits at 90% confidence level (C. L.) are obtained: B({Upsilon}(2S){yields}{gamma}{chi}{sub c0})<1.0x10{sup -4}, B({Upsilon}(2S){yields}{gamma}{chi}{sub c1})<3.6x10{sup -6}, B({Upsilon}(2S){yields}{gamma}{chi}{sub c2})<1.5x10{sup -5}, and B({Upsilon}(2S){yields}{gamma}{eta}{sub c})<2.7x10{sup -5}. No significant signal of any charmoniumlike state is observed, and we obtain the limits B({Upsilon}(2S){yields}{gamma}X(3872))xB(X(3872){yields}{pi}{sup +}{pi}{sup -}J/{psi})<0.8x10{sup -6}, B({Upsilon}(2S){yields}{gamma}X(3872))x B(X(3872){yields}{pi}{sup +}{pi}{sup -}{pi}{sup 0}J/{psi})<2.4x10{sup -6}, B({Upsilon}(2S){yields}{gamma}X(3915))xB(X(3915){yields}{omega}J/{psi})<2.8x10{sup -6}, B({Upsilon}(2S){yields}{gamma}Y(4140))xB(Y(4140){yields}{phi}J/{psi}))<1.2x10{sup -6}, and B({Upsilon}(2S){yields}{gamma}X(4350))xB(X(4350){yields}{phi}J/{psi}))<1.3x10{sup -6} at 90% C. L.

  3. The bHLH/PAS transcription factor singleminded 2s promotes mammary gland lactogenic differentiation.

    PubMed

    Wellberg, Elizabeth; Metz, Richard P; Parker, Caitlin; Porter, Weston W

    2010-03-01

    We have previously demonstrated that the bHLH/PAS transcription factor, singleminded 2s (Sim2s), is required for proper mammary ductal morphogenesis and luminal epithelial differentiation. Furthermore, loss of Sim2s in breast cancer cells resulted in downregulation of epithelial markers and acquisition of a basal-like phenotype. The objective of this study was to further define the role of Sim2s in mammary differentiation. We found that Sim2s is developmentally regulated throughout mammary gland development with highest expression during lactation. Mammary glands from nulliparous mice expressing Sim2s driven by the mouse mammary tumor virus (MMTV) long terminal repeat (LTR) promoter were morphologically indistinguishable from wild-type mice but displayed hallmarks of precocious lactogenic differentiation. These included elevated expression of the milk protein genes Wap and Csn2, and apical localization of the lactation marker Npt2b. Consistent with the in vivo results, Sim2s enhanced prolactin-mediated Csn2 expression in HC11 and CIT3 mouse mammary epithelial cells, and downregulation of Sim2s by shRNA in HC11 cells inhibited Csn2 expression. Chromatin immunoprecipitation (ChIP) analyses of the Csn2 gene found that Sim2s associates with the Csn2 promoter and re-ChIP experiments showed that Sim2s interacted with the RNA II polymerase (RNAPII) complex. Together, these data demonstrate, for the first time, that Sim2s is required for establishing and maintaining mammary gland differentiation. PMID:20150276

  4. 2s2 2p5-2s2p6 transitions in fluorinelike ions from Zr(31+) to Sn(41+)

    NASA Technical Reports Server (NTRS)

    Reader, Joseph; Brown, C. M.; Ekberg, J. O.; Feldman, U.; Seely, J. F.; Behring, W. E.

    1986-01-01

    Transitions of the type 2s2 2p5-2s2p6 have been observed in eight fluorinelike ions from Zr(31+) to Sn(41+). The spectra were produced by focusing light from the Nd:glass Omega laser at the University of Rochester onto solid targets and photographing the resultant plasmas with a 3-m grazing-incidence spectrograph. The identified transitions are in the region 24-60 A. The measured wavelengths are in good agreement with wavelengths calculated with the semiempirical formulas of Edlen (1983). Wavelengths for the 2s2 2p5 2P3/2-2P1/2 magnetic-dipole transitions are given for each ion.

  5. NMR Investigation of an Itinerant Weakly Antiferromagnetism in Metallic Thiospinels CoCo 2S 4 and (Co 1- xCu x)Co 2S 4

    NASA Astrophysics Data System (ADS)

    Sugita, Hiroshi; Wada, Shinji; Yamada, Yoshihiro; Miyatani, Kazuo; Tanaka, Toshiro

    1998-04-01

    Nuclear magnetic resonance of 59Co in a metallic thiospinel compound CoCo2S4 was carried out at 75 MHz in a temperature range between 1.4 and 260 K to study the properties of the low frequency spin dynamics at the tetrahedral A and the octahedral B sites. From the combination of the 59Co Knight shift, spin-lattice relaxation rate and susceptibility measurements, it is concluded that the stoichiometric CoCo2S4 belongs to a group of weakly antiferromagnetic metals with the Néel temperature of ≃55 K. The magnetic properties of Cu substituted compounds (Co1-xCux)Co2S4 were also studied. The results exhibited that the light substitution lowers the Néel temperature and the heavy substitution leads the compound to a nearly Pauli paramagnetic metal.

  6. Surface neutralization and H(2)S oxidation at early stages of sewer corrosion: influence of temperature, relative humidity and H(2)S concentration.

    PubMed

    Joseph, Antony P; Keller, Jürg; Bustamante, Heriberto; Bond, Philip L

    2012-09-01

    While the involvement of a range of environmental factors in sewer corrosion is known, a comprehensive understanding of the processes involved and the exact role of individual environmental factors in sewer corrosion is still lacking. The corrosion of concrete in sewer systems is reported to be initiated through chemical reactions (involving H(2)S and CO(2)) that lower the surface pH to a level then conducive for biological activity. However, the specific influence of environmental variables, such as H(2)S level, temperature, and relative humidity etc. remains unclear; although, they are expected to control these initial surface reactions of the concrete sewer pipe. We examined changes in the surface chemistry of concrete during the early stages of corrosion by exposing concrete coupons to thirty-six independent conditions in well-controlled laboratory chambers that simulated conditions typically found in various sewer environments across Australia. The conditions employed were combinations of six H(2)S levels, three gas-phase temperatures and two relative humidity levels. Our results indicate that the role of CO(2) on initial surface pH reduction is insignificant when compared to the influence of H(2)S. Within the first 12 months, a decrease in surface pH by 4.8 units was observed for coupons exposed to 30 °C and 50 ppm H(2)S, while significantly lower pH reductions of 3.5 and 1.8 units were detected for coupons exposed to 25 °C and 18 °C respectively, and 50 ppm H(2)S. Elemental sulphur was found to be the major oxidation product of H(2)S and elevated concentrations were detected at the higher levels of H(2)S, temperature and relative humidity. More significantly, the data obtained from the controlled chamber experiments correlated with those obtained from the field-exposed coupons. Hence, these findings can be extended to real sewer corrosion processes. PMID:22677502

  7. Solvents for the selective removal of H[sub 2]S from gases containing both H[sub 2]S and CO[sub 2

    SciTech Connect

    Shinnar, R.; Ullmann, A.; Ludmer, Z.; Gibion, K.

    1994-01-11

    A novel class of solvents is described that have improved selectivity for H[sub 2]S as compared to CO[sub 2]. The solvents are based on adding suitable second partially miscible solvent to known solvents. In specific, it is shown that adding 20% of dodecane to NMP (normal methyl pyrrolidinone) increases the selectivity of the solvent for H[sub 2]S as compared to CO[sub 2] by 50%. This leads to important process improvements and reduction in the cost of the removal process. 4 figs.

  8. Tunable surface wettability and water adhesion of Sb2S3 micro-/nanorod films

    NASA Astrophysics Data System (ADS)

    Zhong, Xin; Zhao, Huiping; Yang, Hao; Liu, Yunling; Yan, Guoping; Chen, Rong

    2014-01-01

    Antimony sulfide (Sb2S3) films were successfully prepared by spin coating Sb2S3 micro-/nanorods with different sizes on glass slides, which was synthesized via a facile and rapid microwave irradiation method. The prepared Sb2S3 micro-/nanorods and films were characterized by powder X-ray diffraction (XRD), scanning electron microscopy (SEM), atomic force microscopy (AFM) and water contact angle (CA). The as-prepared Sb2S3 films exhibited different surface wettabilities ranging from superhydrophilicity to superhydrophobicity, which was strongly dependent on the diameter of Sb2S3 micro-/nanorod. Sb2S3 film made by nanorods possessed superhydrophobic surface and high water adhesive property. After surface modification with stearic acid, the superhydrophobic surface exhibited an excellent self-cleaning property owing to its low adhesive force. The clarification of three possible states including Wenzel's state, 'Gecko' state and Cassie's state for Sb2S3 film surfaces was also proposed to provide a better understanding of interesting surface phenomena on Sb2S3 films.

  9. Artificial silver sulfide Ag2S: Crystal structure and particle size in deposited powders

    NASA Astrophysics Data System (ADS)

    Sadovnikov, S. I.; Gusev, A. I.; Rempel, A. A.

    2015-07-01

    Chemical deposition from aqueous solutions of silver nitrate and sodium sulfide was used for synthesis of coarse-crystalline and nanocrystalline silver sulfide Ag2S powders. Sodium citrate was used as a complexing and stabilizing agent during synthesis. X-ray diffraction study shows that synthesized Ag2S powders have monoclinic (space group P21/c) α-Ag2S acanthite type crystal structure. The unit cell of artificial monoclinic silver sulfide Ag2S contains four Ag2S formula units and has the following parameters: a = 0.42264 nm, b = 0.69282 nm, c = 0.95317 nm and β = 125.554°. The size of silver sulfide particles in deposited powders was estimated by the X-ray diffraction and BET methods. By varying the ratio between the concentrations of reagents in the initial reaction mixture it is possible to deposit Ag2S nanoparticles with average size ranging in the interval from ∼1000 to ∼30 nm. Ag2S nanopowders have no deformation distortions of the crystal lattice practically because the microstrains ε in the synthesized powders do not exceed 0.15%. All the Ag2S powders with different particle size have an identical morphology.

  10. Photo-structuring of As(2)S(3) glass by femtosecond irradiation.

    PubMed

    Juodkazis, Saulius; Kondo, Toshiaki; Misawa, Hiroaki; Rode, Andrei; Samoc, Marek; Luther-Davies, Barry

    2006-08-21

    The nonlinear absorption coefficient of As(2)S(3) glass has been measured to be 2.0 cm/GW for femtosecond pulses at 800 nm. Femtosecond laser structuring via two photon absorption in bulk As(2)S(3) glass by erasable and permanent photo-darkening is demonstrated using both holographic and direct multi-beam laser writing. PMID:19529145

  11. Characteristics of H2S emission from aged refuse after excavation exposure.

    PubMed

    Shen, Dong-Sheng; Du, Yao; Fang, Yuan; Hu, Li-Fang; Fang, Cheng-Ran; Long, Yu-Yang

    2015-05-01

    Hydrogen sulfide (H2S(g)) emission from landfills is a widespread problem, especially when aged refuse is excavated. H2S(g) emission from aged refuse exposed to air was investigated and the results showed that large amounts of H2S(g) can be released, especially in the first few hours after excavation, when H2S(g) concentrations in air near refuse could reach 2.00 mg m(-3). Initial exposure to air did not inhibit the emission of H2S(g), as is generally assumed, but actually promoted it. The amounts of H2S(g) emitted in the first 2 d after excavation can be very dangerous, and the risks associated with the emission of H2S(g) could decrease significantly with time. Unlike a large number of sulfide existed under anaerobic conditions, the sulfide in aged municipal solid waste can be oxidized chemically to elemental sulfur (but not sulfate) under aerobic conditions, and its conversion rate was higher than 80%. Only microorganisms can oxidize the reduced sulfur species to sulfate, and the conversion rate could reach about 50%. Using appropriate techniques to enhance these chemical and biological transformations could allow the potential health risks caused by H2S(g) after refuse excavation to be largely avoided. PMID:25725388

  12. Ag-Ag2S Hybrid Nanoprisms: Structural versus Plasmonic Evolution.

    PubMed

    Shahjamali, Mohammad M; Zhou, Yong; Zaraee, Negin; Xue, Can; Wu, Jinsong; Large, Nicolas; McGuirk, C Michael; Boey, Freddy; Dravid, Vinayak; Cui, Zhifeng; Schatz, George C; Mirkin, Chad A

    2016-05-24

    Recently, Ag-Ag2S hybrid nanostructures have attracted a great deal of attention due to their enhanced chemical and thermal stability, in addition to their morphology- and composition-dependent tunable local surface plasmon resonances. Although Ag-Ag2S nanostructures can be synthesized via sulfidation of as-prepared anisotropic Ag nanoparticles, this process is poorly understood, often leading to materials with anomalous compositions, sizes, and shapes and, consequently, optical properties. In this work, we use theory and experiment to investigate the structural and plasmonic evolution of Ag-Ag2S nanoprisms during the sulfidation of Ag precursors. The previously observed red-shifted extinction of the Ag-Ag2S hybrid nanoprism as sulfidation occurs contradicts theoretical predictions, indicating that the reaction does not just occur at the prism tips as previously speculated. Our experiments show that sulfidation can induce either blue or red shifts in the extinction of the dipole plasmon mode, depending on reaction conditions. By elucidating the correlation with the final structure and morphology of the synthesized Ag-Ag2S nanoprisms, we find that, depending on the reaction conditions, sulfidation occurs on the prism tips and/or the (111) surfaces, leading to a core(Ag)-anisotropic shell(Ag2S) prism nanostructure. Additionally, we demonstrate that the direction of the shift in the dipole plasmon is a function of the relative amounts of Ag2S at the prism tips and Ag2S shell thickness around the prism. PMID:27148792

  13. 30 CFR 550.215 - What hydrogen sulfide (H2S) information must accompany the EP?

    Code of Federal Regulations, 2013 CFR

    2013-07-01

    ... activities. (b) Classification. Under 30 CFR 250.490(c), a request that the BSEE Regional Supervisor classify... H2S unknown, an H2S Contingency Plan prepared under 30 CFR 250.490(f), or a reference to an approved... Protection Agency's (EPA) risk management plan methodologies outlined in 40 CFR part 68....

  14. 30 CFR 550.215 - What hydrogen sulfide (H2S) information must accompany the EP?

    Code of Federal Regulations, 2014 CFR

    2014-07-01

    ... activities. (b) Classification. Under 30 CFR 250.490(c), a request that the BSEE Regional Supervisor classify... H2S unknown, an H2S Contingency Plan prepared under 30 CFR 250.490(f), or a reference to an approved... Protection Agency's (EPA) risk management plan methodologies outlined in 40 CFR part 68....

  15. 30 CFR 550.215 - What hydrogen sulfide (H2S) information must accompany the EP?

    Code of Federal Regulations, 2012 CFR

    2012-07-01

    ... activities. (b) Classification. Under 30 CFR 250.490(c), a request that the BSEE Regional Supervisor classify... H2S unknown, an H2S Contingency Plan prepared under 30 CFR 250.490(f), or a reference to an approved... Protection Agency's (EPA) risk management plan methodologies outlined in 40 CFR part 68....

  16. 30 CFR 250.215 - What hydrogen sulfide (H2S) information must accompany the EP?

    Code of Federal Regulations, 2010 CFR

    2010-07-01

    ... methodologies outlined in 40 CFR part 68. ... 30 Mineral Resources 2 2010-07-01 2010-07-01 false What hydrogen sulfide (H2S) information must... Contents of Exploration Plans (ep) § 250.215 What hydrogen sulfide (H2S) information must accompany the...

  17. Potential pitfalls of relying on hydrogen sulfide (H2S) production to identify Salmonella in feed

    Technology Transfer Automated Retrieval System (TEKTRAN)

    Salmonella can be difficult to assess and isolate in poultry feed due to stress, uneven distribution and poor growth. Previous studies have shown that several strains of Salmonella can be affected by environmental changes, resulting in H2S-negative colonies. This is a major concern, as H2S productio...

  18. TEMPORAL AND SPATIAL EXPRESSION OF 2S ALBUMIN IN CASTOR (Ricinus communis L.)

    Technology Transfer Automated Retrieval System (TEKTRAN)

    We studied the temporal and spatial expression of the 2S albumin in castor (Ricinus communis L.) during seed development, germination, post-germination, and plant development. Quantitative PCR analysis showed that the 2S albumin transcript accumulated to a maximum level at the middle of seed develop...

  19. Optimization of the aqueous synthesis of Cu2S quantum dots with different surface ligands

    NASA Astrophysics Data System (ADS)

    Wang, Yue; Liu, Liwei; Wang, Qian; Hu, Siyi; Zou, Peng; Shi, Jing; Zhang, Xihe

    2016-01-01

    Surface functionalization of quantum dots (QDs) is one of the most important aspects of designing and preparing the desired QDs for intended optical and biomedical applications. In this paper, we synthesized aqueous-phase Cu2S quantum dots coating by three different stabilizers, i.e. mercaptoacetic acid, mercaptopropionic acid and glutathione (GSH). Different stabilizers can influence the coordination modes between Cu+ on the surface of Cu2S and S2- of the ligand. The Cu2S QDs were characterized by UV-vis spectroscopy, energy dispersive spectrometry, transmission electron microscopy, Fourier transform infrared spectroscopy, x-ray diffraction and Raman spectra. Then, we performed a systematic study to evaluate the colloidal stability and in vitro toxicity of the formulations of Cu2S QDs with different stabilizers. Our results show that Cu2S QDs modified with different stabilizers have distinct functional groups on their surface and these groups make Cu2S produce different vibrations according to Raman spectra. The Cu2S-GSH exhibit the best colloidal stability in all pH buffer solutions and the lowest toxicity compare to the other two stabilizers. These properties make the Cu2S-GSH quantum dots a candidate for bioapplications in the future.

  20. Order-disorder transitions in NiCr 2S 4

    NASA Astrophysics Data System (ADS)

    Vaqueiro, P.; Powell, A. V.; Lebech, B.

    2000-03-01

    Order-disorder transitions in NiCr 2S 4 have been investigated by high-temperature powder neutron diffraction. At 835(5)°C, NiCr 2S 4 transforms from the monoclinic Cr 3S 4 structure to a hexagonal cation-deficient NiAs structure.

  1. Carbon quantum dots decorated Cu2S nanowire arrays for enhanced photoelectrochemical performance

    NASA Astrophysics Data System (ADS)

    Li, Ming; Zhao, Renjie; Su, Yanjie; Yang, Zhi; Zhang, Yafei

    2016-04-01

    The photoelectrochemical (PEC) performance of Cu2S nanowire arrays (NWAs) has been demonstrated to be greatly enhanced by dipping-assembly of carbon quantum dots (CQDs) on the surfaces of Cu2S NWAs. Experimental results show that the pristine Cu2S NWAs with higher aspect ratios exhibit better PEC performance due to the longer length scale for light absorption and the shorter length scale for minority carrier diffusion. Importantly, the CQDs decorated Cu2S NWAs exhibit remarkably enhanced photocurrent density, giving a photocurrent density of 1.05 mA cm-2 at 0 V vs. NHE and an optimal photocathode efficiency of 0.148% under illumination of AM 1.5G (100 mW cm-2), which is 4 times higher than that of the pristine Cu2S NWAs. This can be attributed to the improved electron transfer and the energy-down-shift effect of CQDs. We believe that this inexpensive Cu2S/CQD photocathode with increased photocurrent density opens up new opportunities in PEC water splitting.The photoelectrochemical (PEC) performance of Cu2S nanowire arrays (NWAs) has been demonstrated to be greatly enhanced by dipping-assembly of carbon quantum dots (CQDs) on the surfaces of Cu2S NWAs. Experimental results show that the pristine Cu2S NWAs with higher aspect ratios exhibit better PEC performance due to the longer length scale for light absorption and the shorter length scale for minority carrier diffusion. Importantly, the CQDs decorated Cu2S NWAs exhibit remarkably enhanced photocurrent density, giving a photocurrent density of 1.05 mA cm-2 at 0 V vs. NHE and an optimal photocathode efficiency of 0.148% under illumination of AM 1.5G (100 mW cm-2), which is 4 times higher than that of the pristine Cu2S NWAs. This can be attributed to the improved electron transfer and the energy-down-shift effect of CQDs. We believe that this inexpensive Cu2S/CQD photocathode with increased photocurrent density opens up new opportunities in PEC water splitting. Electronic supplementary information (ESI) available

  2. Fabrication of water-soluble polymer-encapsulated As4S4 to increase oral bioavailability and chemotherapeutic efficacy in AML mice

    PubMed Central

    Ma, Qiang; Wang, Chuan; Li, Xiaojin; Guo, Hua; Meng, Jie; Liu, Jian; Xu, Haiyan

    2016-01-01

    Realgar (As4S4) has been demonstrated to be effective for the treatment of acute myeloid leukemia (AML); it has the advantages of no drug resistance and oral administration. Nevertheless, its poor solubility has been an obstacle to its bioavailability, requiring high-dose administration over a long period. We investigated whether crushing realgar crystals to the nanoscale and encapsulating the particles in a water-soluble polymer in one step using hot-melt extrusion would increase the bioavailability of As4S4. Raw As4S4 (r-As4S4) and water-soluble polymer were processed via co-rotating twin screw extrusion. The resulting product (e-As4S4) was characterized by SEM, XRD, and DLS. The cytotoxicity and therapeutic effects of e-As4S4 were evaluated in vivo and in vitro. The results show that e-As4S4 dissolved rapidly in water, forming a stable colloid solution. The average size of e-As4S4 particles was 680 nm, which was reduced by more than 40-fold compared with that of r-As4S4. The bioavailability of e-As4S4 was up to 12.6-fold higher than that of r-As4S4, and it inhibited the proliferation of HL-60 cells much more effectively than did r-As4S4, inducing apoptosis and significantly reducing the infiltration of HL-60 cells into the bone marrow, spleen, and liver. This in turn prolonged the survival of AML mice. PMID:27383126

  3. Fabrication of water-soluble polymer-encapsulated As4S4 to increase oral bioavailability and chemotherapeutic efficacy in AML mice.

    PubMed

    Ma, Qiang; Wang, Chuan; Li, Xiaojin; Guo, Hua; Meng, Jie; Liu, Jian; Xu, Haiyan

    2016-01-01

    Realgar (As4S4) has been demonstrated to be effective for the treatment of acute myeloid leukemia (AML); it has the advantages of no drug resistance and oral administration. Nevertheless, its poor solubility has been an obstacle to its bioavailability, requiring high-dose administration over a long period. We investigated whether crushing realgar crystals to the nanoscale and encapsulating the particles in a water-soluble polymer in one step using hot-melt extrusion would increase the bioavailability of As4S4. Raw As4S4 (r-As4S4) and water-soluble polymer were processed via co-rotating twin screw extrusion. The resulting product (e-As4S4) was characterized by SEM, XRD, and DLS. The cytotoxicity and therapeutic effects of e-As4S4 were evaluated in vivo and in vitro. The results show that e-As4S4 dissolved rapidly in water, forming a stable colloid solution. The average size of e-As4S4 particles was 680 nm, which was reduced by more than 40-fold compared with that of r-As4S4. The bioavailability of e-As4S4 was up to 12.6-fold higher than that of r-As4S4, and it inhibited the proliferation of HL-60 cells much more effectively than did r-As4S4, inducing apoptosis and significantly reducing the infiltration of HL-60 cells into the bone marrow, spleen, and liver. This in turn prolonged the survival of AML mice. PMID:27383126

  4. Synthesis and photocatalytic properties of vertically aligned Bi2S3 platelets

    NASA Astrophysics Data System (ADS)

    Tang, Chunjuan; Zhang, Yongsheng; Su, Jianfeng; Wang, Changqing; Sun, Ruirui; Zhang, Jiao; Li, Guanghai

    2016-01-01

    Vertically aligned Bi2S3 platelets have been synthesized on FTO substrate via a simple hydrothermal process. X-ray diffraction analysis confirms the orthorhombic structure of the platelets. The results of scanning electron microscopy show that the Bi2S3 platelets interconnect with each other. The length of platelets is about 5 μm and the thickness ranges from 50 to 150 nm. The photocatalytic activity studies reveal that the synthesized Bi2S3 platelets exhibit excellent photocatalytic performance in rapidly degrading aqueous methylene blue dye solution under UV irradiation. A degradation ratio of 56% was obtained for the Bi2S3 platelets at 120 min and about 99% at 240 min. These results suggest that Bi2S3 platelets will be an interesting candidate for photocatalytic detoxification under UV light.

  5. The impact of H2S emissions on future geothermal power generation - The Geysers region, California

    NASA Technical Reports Server (NTRS)

    Leibowitz, L. P.

    1977-01-01

    The future potential for geothermal power generation in the Geysers region of California is as much as 10 times the current 502 MW(e) capacity. However, environmental factors such as H2S emissions and institutional considerations may play the primary role in determining the rate and ultimate level of development. In this paper a scenario of future geothermal generation capacity and H2S emissions in the Geysers region is presented. Problem areas associated with H2S emissions, H2S abatement processes, plant operations, and government agency resources are described. The impact of H2S emissions on future development and the views of effected organizations are discussed. Potential actions needed to remove these constraints are summarized.

  6. Interaction of H2S with Calcium Permeable Channels and Transporters

    PubMed Central

    Zhang, Weihua; Xu, Changqing; Wu, Lingyun; Wang, Rui

    2015-01-01

    A growing amount of evidence has suggested that hydrogen sulfide (H2S), as a gasotransmitter, is involved in intensive physiological and pathological processes. More and more research groups have found that H2S mediates diverse cellular biological functions related to regulating intracellular calcium concentration. These groups have demonstrated the reciprocal interaction between H2S and calcium ion channels and transporters, such as L-type calcium channels (LTCC), T-type calcium channels (TTCC), sodium/calcium exchangers (NCX), transient receptor potential (TRP) channels, β-adrenergic receptors, and N-methyl-D-aspartate receptors (NMDAR) in different cells. However, the understanding of the molecular targets and mechanisms is incomplete. Recently, some research groups demonstrated that H2S modulates the activity of calcium ion channels through protein S-sulfhydration and polysulfide reactions. In this review, we elucidate that H2S controls intracellular calcium homeostasis and the underlying mechanisms. PMID:26078804

  7. Conductance switching in Ag2S devices fabricated by in situ sulfurization

    NASA Astrophysics Data System (ADS)

    Morales-Masis, M.; van der Molen, S. J.; Fu, W. T.; Hesselberth, M. B.; van Ruitenbeek, J. M.

    2009-03-01

    We report a simple and reproducible method to fabricate switchable Ag2S devices. The α-Ag2S thin films are produced by a sulfurization process after silver deposition on an Si substrate. Structure and composition of the Ag2S are characterized using XRD and RBS. Our samples show semiconductor behaviour at low bias voltages, whereas they exhibit reproducible bipolar resistance switching at higher bias voltages. The transition between both types of behaviour is observed by hysteresis in the I-V curves, indicating decomposition of the Ag2S, increasing the Ag+ ion mobility. The as-fabricated Ag2S samples are a good candidate for future solid state memory devices, as they show reproducible memory resistive properties and they are fabricated by an accessible and reliable method.

  8. Conductance switching in Ag(2)S devices fabricated by in situ sulfurization.

    PubMed

    Morales-Masis, M; van der Molen, S J; Fu, W T; Hesselberth, M B; van Ruitenbeek, J M

    2009-03-01

    We report a simple and reproducible method to fabricate switchable Ag(2)S devices. The alpha-Ag(2)S thin films are produced by a sulfurization process after silver deposition on an Si substrate. Structure and composition of the Ag(2)S are characterized using XRD and RBS. Our samples show semiconductor behaviour at low bias voltages, whereas they exhibit reproducible bipolar resistance switching at higher bias voltages. The transition between both types of behaviour is observed by hysteresis in the I-V curves, indicating decomposition of the Ag(2)S, increasing the Ag(+) ion mobility. The as-fabricated Ag(2)S samples are a good candidate for future solid state memory devices, as they show reproducible memory resistive properties and they are fabricated by an accessible and reliable method. PMID:19417506

  9. Li2S Film Formation on Lithium Anode Surface of Li-S batteries.

    PubMed

    Liu, Zhixiao; Bertolini, Samuel; Balbuena, Perla B; Mukherjee, Partha P

    2016-02-01

    The precipitation of lithium sulfide (Li2S) on the Li metal anode surface adversely impacts the performance of lithium-sulfur (Li-S) batteries. In this study, a first-principles approach including density functional theory (DFT) and ab initio molecular dynamics (AIMD) simulations is employed to theoretically elucidate the Li2S/Li metal surface interactions and the nucleation and growth of a Li2S film on the anode surface due to long-chain polysulfide decomposition during battery operation. DFT analyses of the energetic properties and electronic structures demonstrate that a single molecule adsorption on Li surface releases energy forming chemical bonds between the S atoms and Li atoms from the anode surface. Reaction pathways of the Li2S film formation on Li metal surfaces are investigated based on DFT calculations. It is found that a distorted Li2S (111) plane forms on a Li(110) surface and a perfect Li2S (111) plane forms on a Li(111) surface. The total energy of the system decreases along the reaction pathway; hence Li2S film formation on the Li anode surface is thermodynamically favorable. The calculated difference charge density of the Li2S film/Li surface suggests that the precipitated film would interact with the Li anode via strong chemical bonds. AIMD simulations reveal the role of the anode surface structure and the origin of the Li2S formation via decomposition of Li2S8 polysulfide species formed at the cathode side and dissolved in the electrolyte medium in which they travel to the anode side during battery cycling. PMID:26836249

  10. Molecular Characterization of Salmonella enterica Serovar Aberdeen Negative for H2S Production in China.

    PubMed

    Wu, Fuli; Xu, Xuebin; Xie, Jing; Yi, Shengjie; Wang, Jian; Yang, Xiaoxia; Yang, Chaojie; Liang, Beibei; Ma, Qiuxia; Li, Hao; Song, Hongbin; Qiu, Shaofu

    2016-01-01

    Salmonella enterica infections continue to be a significant burden on public health worldwide. The ability of S. enterica to produce hydrogen sulfide (H2S) is an important phenotypic characteristic used to screen and identify Salmonella with selective medium; however, H2S-negative Salmonella have recently emerged. In this study, the H2S phenotype of Salmonella isolates was confirmed, and the selected isolates were subjected to antimicrobial susceptibility testing and molecular identification by multilocus sequence typing, pulsed-field gel electrophoresis, and clustered regularly interspaced short palindromic repeat (CRISPR) analysis. The phs genetic operon was also analyzed. A total of 160 S. enterica serovar Aberdeen isolates were detected between 2005 and 2013 in China. Of them, seven non-H2S-producing isolates were detected. Notably, four samples yielded four pairs of isolates with different H2S phenotypes, simultaneously. The data demonstrated that H2S-negative isolates were genetically closely related to H2S-positive isolates. Three new spacers (Abe1, Abe2, and Abe3) were identified in CRISPR locus 1 in four pairs of isolates with different H2S phenotypes from the same samples. Sequence analysis revealed a new nonsense mutation at position 208 in the phsA gene of all non-H2S-producing isolates. Additionally, we describe a new screening procedure to avoid H2S-negative Salmonella, which would normally be overlooked during laboratory and hospital screening. The prevalence of this pathogen may be underestimated; therefore, it is important to focus on improving surveillance of this organism to control its spread. PMID:27552230

  11. Molecular Characterization of Salmonella enterica Serovar Aberdeen Negative for H2S Production in China

    PubMed Central

    Yi, Shengjie; Wang, Jian; Yang, Xiaoxia; Yang, Chaojie; Liang, Beibei; Ma, Qiuxia; Li, Hao; Song, Hongbin; Qiu, Shaofu

    2016-01-01

    Salmonella enterica infections continue to be a significant burden on public health worldwide. The ability of S. enterica to produce hydrogen sulfide (H2S) is an important phenotypic characteristic used to screen and identify Salmonella with selective medium; however, H2S-negative Salmonella have recently emerged. In this study, the H2S phenotype of Salmonella isolates was confirmed, and the selected isolates were subjected to antimicrobial susceptibility testing and molecular identification by multilocus sequence typing, pulsed-field gel electrophoresis, and clustered regularly interspaced short palindromic repeat (CRISPR) analysis. The phs genetic operon was also analyzed. A total of 160 S. enterica serovar Aberdeen isolates were detected between 2005 and 2013 in China. Of them, seven non-H2S-producing isolates were detected. Notably, four samples yielded four pairs of isolates with different H2S phenotypes, simultaneously. The data demonstrated that H2S-negative isolates were genetically closely related to H2S-positive isolates. Three new spacers (Abe1, Abe2, and Abe3) were identified in CRISPR locus 1 in four pairs of isolates with different H2S phenotypes from the same samples. Sequence analysis revealed a new nonsense mutation at position 208 in the phsA gene of all non-H2S-producing isolates. Additionally, we describe a new screening procedure to avoid H2S-negative Salmonella, which would normally be overlooked during laboratory and hospital screening. The prevalence of this pathogen may be underestimated; therefore, it is important to focus on improving surveillance of this organism to control its spread. PMID:27552230

  12. Spectroscopy and isotope shifts of the 4s3d {sup 1}D{sub 2}-4s5p {sup 1}P{sub 1} repumping transition in magneto-optically trapped calcium atoms

    SciTech Connect

    Dammalapati, U.; Norris, I.; Burrows, C.; Arnold, A. S.; Riis, E.

    2010-02-15

    We investigate a repumping scheme for magneto-optically trapped calcium atoms. It is based on excitation of the 4s3d{sup 1}D{sub 2}-4s5p{sup 1}P{sub 1} transition at 672 nm with an extended cavity diode laser. The effect of the repumping is approximately a factor of three increase in trap lifetime and a doubling of the trapping efficiency from a Zeeman slowed thermal beam. Added to this, the 672-nm laser repumps atoms from an otherwise dark state to yield an overall increase in detected fluorescence signal from the magneto-optic trap (MOT) of more than an order of magnitude. Furthermore, we report isotope shift measurements of the 672-nm transition, for the first time, for four naturally occurring even isotopes. Using available charge radii data, the observed shifts, extending up to 4.3 GHz, display the expected linear dependence in a King plot analysis. The measured shifts are used to determine the isotope shifts of the remaining {sup 41,43,46}Ca isotopes. These might be of interest where less abundant isotopes are used enabling isotope selective repumping, resulting in enhanced trapping and detection efficiencies.

  13. Protein dynamics and the all-ferrous [Fe4 S4 ] cluster in the nitrogenase iron protein.