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Sample records for 3d direct numerical

  1. Terascale direct numerical simulations of turbulent combustion using S3D

    NASA Astrophysics Data System (ADS)

    Chen, J. H.; Choudhary, A.; de Supinski, B.; DeVries, M.; Hawkes, E. R.; Klasky, S.; Liao, W. K.; Ma, K. L.; Mellor-Crummey, J.; Podhorszki, N.; Sankaran, R.; Shende, S.; Yoo, C. S.

    2009-01-01

    Computational science is paramount to the understanding of underlying processes in internal combustion engines of the future that will utilize non-petroleum-based alternative fuels, including carbon-neutral biofuels, and burn in new combustion regimes that will attain high efficiency while minimizing emissions of particulates and nitrogen oxides. Next-generation engines will likely operate at higher pressures, with greater amounts of dilution and utilize alternative fuels that exhibit a wide range of chemical and physical properties. Therefore, there is a significant role for high-fidelity simulations, direct numerical simulations (DNS), specifically designed to capture key turbulence-chemistry interactions in these relatively uncharted combustion regimes, and in particular, that can discriminate the effects of differences in fuel properties. In DNS, all of the relevant turbulence and flame scales are resolved numerically using high-order accurate numerical algorithms. As a consequence terascale DNS are computationally intensive, require massive amounts of computing power and generate tens of terabytes of data. Recent results from terascale DNS of turbulent flames are presented here, illustrating its role in elucidating flame stabilization mechanisms in a lifted turbulent hydrogen/air jet flame in a hot air coflow, and the flame structure of a fuel-lean turbulent premixed jet flame. Computing at this scale requires close collaborations between computer and combustion scientists to provide optimized scaleable algorithms and software for terascale simulations, efficient collective parallel I/O, tools for volume visualization of multiscale, multivariate data and automating the combustion workflow. The enabling computer science, applied to combustion science, is also required in many other terascale physics and engineering simulations. In particular, performance monitoring is used to identify the performance of key kernels in the DNS code, S3D and especially memory

  2. Numerical Investigation of T-joints with 3D Four Directional Braided Composite Fillers Under Tensile Loading

    NASA Astrophysics Data System (ADS)

    Li, Xiao-kang; Liu, Zhen-guo; Hu, Long; Wang, Yi-bo; Lei, Bing; Huang, Xiang

    2017-02-01

    Numerical studied on T-joints with three-dimensional four directional (3D4D) braided composite fillers was presented in this article. Compared with conventional unidirectional prepreg fillers, the 3D braided composite fillers have excellent ability to prevent crack from penetrating trigone fillers, which constantly occurred in the conventional fillers. Meanwhile, the 3D braided composite fillers had higher fiber volume fraction and eliminated the fiber folding problem in unidirectional prepreg fillers. The braiding technology and mechanical performance of 3D4D braided fillers were studied. The numerical model of carbon fiber T-joints with 3D4D braided composite fillers was built by finite element analysis software. The damage formation, extension and failing process of T-joints with 3D4D braided fillers under tensile load were investigated. Further investigation was extended to the effect of 3D4D braided fillers with different braiding angles on mechanical behavior of the T-joints. The study results revealed that the filling area was the weakest part of the T-joints where the damage first appeared and the crack then rapidly spread to the glue film around the filling area and the interface between over-laminate and soleplate. The 3D4D braided fillers were undamaged and the braiding angle change induced a little effect on the bearing capacity of T-joints.

  3. A direct numerical reconstruction algorithm for the 3D Calderón problem

    NASA Astrophysics Data System (ADS)

    Delbary, Fabrice; Hansen, Per Christian; Knudsen, Kim

    2011-04-01

    In three dimensions Calderón's problem was addressed and solved in theory in the 1980s in a series of papers, but only recently the numerical implementation of the algorithm was initiated. The main ingredients in the solution of the problem are complex geometrical optics solutions to the conductivity equation and a (non-physical) scattering transform. The resulting reconstruction algorithm is in principle direct and addresses the full non-linear problem immediately. In this paper we will outline the theoretical reconstruction method and describe how the method can be implemented numerically. We will give three different implementations, and compare their performance on a numerical phantom.

  4. Multigrid direct numerical simulation of the whole process of flow transition in 3-D boundary layers

    NASA Technical Reports Server (NTRS)

    Liu, Chaoqun; Liu, Zhining

    1993-01-01

    A new technology was developed in this study which provides a successful numerical simulation of the whole process of flow transition in 3-D boundary layers, including linear growth, secondary instability, breakdown, and transition at relatively low CPU cost. Most other spatial numerical simulations require high CPU cost and blow up at the stage of flow breakdown. A fourth-order finite difference scheme on stretched and staggered grids, a fully implicit time marching technique, a semi-coarsening multigrid based on the so-called approximate line-box relaxation, and a buffer domain for the outflow boundary conditions were all used for high-order accuracy, good stability, and fast convergence. A new fine-coarse-fine grid mapping technique was developed to keep the code running after the laminar flow breaks down. The computational results are in good agreement with linear stability theory, secondary instability theory, and some experiments. The cost for a typical case with 162 x 34 x 34 grid is around 2 CRAY-YMP CPU hours for 10 T-S periods.

  5. MODELING STATISTICAL PROPERTIES OF SOLAR ACTIVE REGIONS THROUGH DIRECT NUMERICAL SIMULATIONS OF 3D-MHD TURBULENCE

    SciTech Connect

    Malapaka, Shiva Kumar; Mueller, Wolf-Christian

    2013-09-01

    Statistical properties of the Sun's photospheric turbulent magnetic field, especially those of the active regions (ARs), have been studied using the line-of-sight data from magnetograms taken by the Solar and Heliospheric Observatory and several other instruments. This includes structure functions and their exponents, flatness curves, and correlation functions. In these works, the dependence of structure function exponents ({zeta}{sub p}) of the order of the structure functions (p) was modeled using a non-intermittent K41 model. It is now well known that the ARs are highly turbulent and are associated with strong intermittent events. In this paper, we compare some of the observations from Abramenko et al. with the log-Poisson model used for modeling intermittent MHD turbulent flows. Next, we analyze the structure function data obtained from the direct numerical simulations (DNS) of homogeneous, incompressible 3D-MHD turbulence in three cases: sustained by forcing, freely decaying, and a flow initially driven and later allowed to decay (case 3). The respective DNS replicate the properties seen in the plots of {zeta}{sub p} against p of ARs. We also reproduce the trends and changes observed in intermittency in flatness and correlation functions of ARs. It is suggested from this analysis that an AR in the onset phase of a flare can be treated as a forced 3D-MHD turbulent system in its simplest form and that the flaring stage is representative of decaying 3D-MHD turbulence. It is also inferred that significant changes in intermittency from the initial onset phase of a flare to its final peak flaring phase are related to the time taken by the system to reach the initial onset phase.

  6. How Plates Pull Transforms Apart: 3-D Numerical Models of Oceanic Transform Fault Response to Changes in Plate Motion Direction

    NASA Astrophysics Data System (ADS)

    Morrow, T. A.; Mittelstaedt, E. L.; Olive, J. A. L.

    2015-12-01

    Observations along oceanic fracture zones suggest that some mid-ocean ridge transform faults (TFs) previously split into multiple strike-slip segments separated by short (<~50 km) intra-transform spreading centers and then reunited to a single TF trace. This history of segmentation appears to correspond with changes in plate motion direction. Despite the clear evidence of TF segmentation, the processes governing its development and evolution are not well characterized. Here we use a 3-D, finite-difference / marker-in-cell technique to model the evolution of localized strain at a TF subjected to a sudden change in plate motion direction. We simulate the oceanic lithosphere and underlying asthenosphere at a ridge-transform-ridge setting using a visco-elastic-plastic rheology with a history-dependent plastic weakening law and a temperature- and stress-dependent mantle viscosity. To simulate the development of topography, a low density, low viscosity 'sticky air' layer is present above the oceanic lithosphere. The initial thermal gradient follows a half-space cooling solution with an offset across the TF. We impose an enhanced thermal diffusivity in the uppermost 6 km of lithosphere to simulate the effects of hydrothermal circulation. An initial weak seed in the lithosphere helps localize shear deformation between the two offset ridge axes to form a TF. For each model case, the simulation is run initially with TF-parallel plate motion until the thermal structure reaches a steady state. The direction of plate motion is then rotated either instantaneously or over a specified time period, placing the TF in a state of trans-tension. Model runs continue until the system reaches a new steady state. Parameters varied here include: initial TF length, spreading rate, and the rotation rate and magnitude of spreading obliquity. We compare our model predictions to structural observations at existing TFs and records of TF segmentation preserved in oceanic fracture zones.

  7. 3D Numerical simulations of oblique subduction

    NASA Astrophysics Data System (ADS)

    Malatesta, C.; Gerya, T.; Scambelluri, M.; Crispini, L.; Federico, L.; Capponi, G.

    2012-04-01

    In the past 2D numerical studies (e.g. Gerya et al., 2002; Gorczyk et al., 2007; Malatesta et al., 2012) provided evidence that during intraoceanic subduction a serpentinite channel forms above the downgoing plate. This channel forms as a result of hydration of the mantle wedge by uprising slab-fluids. Rocks buried at high depths are finally exhumed within this buoyant low-viscosity medium. Convergence rate in these 2D models was described by a trench-normal component of velocity. Several present and past subduction zones worldwide are however driven by oblique convergence between the plates, where trench-normal motion of the subducting slab is coupled with trench-parallel displacement of the plates. Can the exhumation mechanism and the exhumation rates of high-pressure rocks be affected by the shear component of subduction? And how uprise of these rocks can vary along the plate margin? We tried to address these questions performing 3D numerical models that simulate an intraoceanic oblique subduction. The models are based on thermo-mechanical equations that are solved with finite differences method and marker-in-cell techniques combined with multigrid approach (Gerya, 2010). In most of the models a narrow oceanic basin (500 km-wide) surrounded by continental margins is depicted. The basin is floored by either layered or heterogeneous oceanic lithosphere with gabbro as discrete bodies in serpentinized peridotite and a basaltic layer on the top. A weak zone in the mantle is prescribed to control the location of subduction initiation and therefore the plate margins geometry. Finally, addition of a third dimension in the simulations allowed us to test the role of different plate margin geometries on oblique subduction dynamics. In particular in each model we modified the dip angle of the weak zone and its "lateral" geometry (e.g. continuous, segmented). We consider "continuous" weak zones either parallel or increasingly moving away from the continental margins

  8. Numerical Investigation of 3-D Separation: DNS, LES and URANS

    DTIC Science & Technology

    2010-05-01

    Final Report Numerical Investigation of 3-D Separation: DNS, LES and URANS Office of Naval Research Contract number: N00014-07-1-0401 Program...COVERED (From - To) 12/11/2006-12/31/2009 4. TITLE AND SUBTITLE Numerical Investigation of 3-D Separation: DNS, LES and URANS 5a. CONTRACT NUMBER

  9. Numerical study on 3D composite morphing actuators

    NASA Astrophysics Data System (ADS)

    Oishi, Kazuma; Saito, Makoto; Anandan, Nishita; Kadooka, Kevin; Taya, Minoru

    2015-04-01

    There are a number of actuators using the deformation of electroactive polymer (EAP), where fewer papers seem to have focused on the performance of 3D morphing actuators based on the analytical approach, due mainly to their complexity. The present paper introduces a numerical analysis approach on the large scale deformation and motion of a 3D half dome shaped actuator composed of thin soft membrane (passive material) and EAP strip actuators (EAP active coupon with electrodes on both surfaces), where the locations of the active EAP strips is a key parameter. Simulia/Abaqus Static and Implicit analysis code, whose main feature is the high precision contact analysis capability among structures, are used focusing on the whole process of the membrane to touch and wrap around the object. The unidirectional properties of the EAP coupon actuator are used as input data set for the material properties for the simulation and the verification of our numerical model, where the verification is made as compared to the existing 2D solution. The numerical results can demonstrate the whole deformation process of the membrane to wrap around not only smooth shaped objects like a sphere or an egg, but also irregularly shaped objects. A parametric study reveals the proper placement of the EAP coupon actuators, with the modification of the dome shape to induce the relevant large scale deformation. The numerical simulation for the 3D soft actuators shown in this paper could be applied to a wider range of soft 3D morphing actuators.

  10. The numerical measure of symmetry for 3D stick creatures.

    PubMed

    Jaśkowski, Wojciech; Komosinski, Maciej

    2008-01-01

    This work introduces a numerical, continuous measure of symmetry for 3D stick creatures and solid 3D objects. Background information about the property of symmetry is provided, and motivations for developing a symmetry measure are described. Three approaches are mentioned, and two of them are presented in detail using formal mathematical language. The best approach is used to sort a set of creatures according to their symmetry. Experiments with a mixed set of 84 individuals originating from both human design and evolution are performed to examine symmetry within these two sources, and to determine if human designers and evolutionary processes prefer symmetry or asymmetry.

  11. Using 3-D Numerical Weather Data in Piloted Simulations

    NASA Technical Reports Server (NTRS)

    Daniels, Taumi S.

    2016-01-01

    This report describes the process of acquiring and using 3-D numerical model weather data sets in NASA Langley's Research Flight Deck (RFD). A set of software tools implement the process and can be used for other purposes as well. Given time and location information of a weather phenomenon of interest, the user can download associated numerical weather model data. These data are created by the National Oceanic and Atmospheric Administration (NOAA) High Resolution Rapid Refresh (HRRR) model, and are then processed using a set of Mathworks' Matlab(TradeMark) scripts to create the usable 3-D weather data sets. Each data set includes radar re ectivity, water vapor, component winds, temperature, supercooled liquid water, turbulence, pressure, altitude, land elevation, relative humidity, and water phases. An open-source data processing program, wgrib2, is available from NOAA online, and is used along with Matlab scripts. These scripts are described with sucient detail to make future modi cations. These software tools have been used to generate 3-D weather data for various RFD experiments.

  12. 3D EFT imaging with planar electrode array: Numerical simulation

    NASA Astrophysics Data System (ADS)

    Tuykin, T.; Korjenevsky, A.

    2010-04-01

    Electric field tomography (EFT) is the new modality of the quasistatic electromagnetic sounding of conductive media recently investigated theoretically and realized experimentally. The demonstrated results pertain to 2D imaging with circular or linear arrays of electrodes (and the linear array provides quite poor quality of imaging). In many applications 3D imaging is essential or can increase value of the investigation significantly. In this report we present the first results of numerical simulation of the EFT imaging system with planar array of electrodes which allows 3D visualization of the subsurface conductivity distribution. The geometry of the system is similar to the geometry of our EIT breast imaging system providing 3D conductivity imaging in form of cross-sections set with different depth from the surface. The EFT principle of operation and reconstruction approach differs from the EIT system significantly. So the results of numerical simulation are important to estimate if comparable quality of imaging is possible with the new contactless method. The EFT forward problem is solved using finite difference time domain (FDTD) method for the 8×8 square electrodes array. The calculated results of measurements are used then to reconstruct conductivity distributions by the filtered backprojections along electric field lines. The reconstructed images of the simple test objects are presented.

  13. 3D Numerical Simulations of the Breakout Model

    NASA Astrophysics Data System (ADS)

    Choe, G. S.; Cheng, C. Z.; Lee, J.; Lynch, B. J.; Antiochos, S. K.; DeVore, C. R.; Zurbuchen, T. H.

    2005-05-01

    We present the continuing progress of the numerical simulations of the breakout model for coronal mass ejection initiation. To validate the 3D spherical ARMS code we have run the 2.5D breakout problem and compare the eruption to the published 2D results. The ARMS 2.5D CME also forms a large magnetic island ahead of the erupting plasmoid due to the code's excellent maintenance of equatorial symmetry. Progress on the fully 3D breakout problem is also discussed. To build up enough magnetic free energy for an eruption the active region field must be strong with a steep gradient near the polarity inversion line and the shear must be highly concentrated there. This requires adaptive griding techniques. In the current simulation, the active region to background field ratio is 20-to-1 and the neutral line is long compared to the active region width. We present the evolution of this topology under Br-conserving shearing flow and discuss implications for a 3D eruption. This work is supported by NASA and ONR. BJL is supported by NASA GSRP grant NGT5-50453.

  14. Direct-Write 3D Nanoprinting of Plasmonic Structures

    DOE PAGES

    Winkler, Robert; Schmidt, Franz-Philipp; Karl-Franzens Univ.; ...

    2016-11-23

    During the past decade, significant progress has been made in the field of resonant optics ranging from fundamental aspects to concrete applications. And while several techniques have been introduced for the fabrication of highly defined metallic nanostructures, the synthesis of complex, free-standing three-dimensional (3D) structures is still an intriguing, but so far intractable, challenge. Here, we demonstrate a 3D direct-write synthesis approach that addresses this challenge. Specifically, we succeeded in the direct-write fabrication of 3D nanoarchitectures via electron-stimulated reactions, which are applicable on virtually any material and surface morphology. Furthermore, by that, complex 3D nanostructures composed of highly compact, puremore » gold can be fabricated, which reveal strong plasmonic activity and pave the way for a new generation of 3D nanoplasmonic architectures that can be printed on-demand.« less

  15. Direct-Write 3D Nanoprinting of Plasmonic Structures.

    PubMed

    Winkler, Robert; Schmidt, Franz-Philipp; Haselmann, Ulrich; Fowlkes, Jason D; Lewis, Brett B; Kothleitner, Gerald; Rack, Philip D; Plank, Harald

    2017-03-08

    During the past decade, significant progress has been made in the field of resonant optics ranging from fundamental aspects to concrete applications. While several techniques have been introduced for the fabrication of highly defined metallic nanostructures, the synthesis of complex, free-standing three-dimensional (3D) structures is still an intriguing, but so far intractable, challenge. In this study, we demonstrate a 3D direct-write synthesis approach that addresses this challenge. Specifically, we succeeded in the direct-write fabrication of 3D nanoarchitectures via electron-stimulated reactions, which are applicable on virtually any material and surface morphology. By that, complex 3D nanostructures composed of highly compact, pure gold can be fabricated, which reveal strong plasmonic activity and pave the way for a new generation of 3D nanoplasmonic architectures that can be printed on-demand.

  16. Direct-Write 3D Nanoprinting of Plasmonic Structures

    SciTech Connect

    Winkler, Robert; Schmidt, Franz-Philipp; Haselmann, Ulrich; Fowlkes, Jason D.; Lewis, Brett B.; Kothleitner, Gerald; Rack, Philip D.; Plank, Harald

    2016-11-23

    During the past decade, significant progress has been made in the field of resonant optics ranging from fundamental aspects to concrete applications. And while several techniques have been introduced for the fabrication of highly defined metallic nanostructures, the synthesis of complex, free-standing three-dimensional (3D) structures is still an intriguing, but so far intractable, challenge. Here, we demonstrate a 3D direct-write synthesis approach that addresses this challenge. Specifically, we succeeded in the direct-write fabrication of 3D nanoarchitectures via electron-stimulated reactions, which are applicable on virtually any material and surface morphology. Furthermore, by that, complex 3D nanostructures composed of highly compact, pure gold can be fabricated, which reveal strong plasmonic activity and pave the way for a new generation of 3D nanoplasmonic architectures that can be printed on-demand.

  17. 3-D numerical modeling of plume-induced subduction initiation

    NASA Astrophysics Data System (ADS)

    Baes, Marzieh; Gerya, taras; Sobolev, Stephan

    2016-04-01

    Investigation of mechanisms involved in formation of a new subduction zone can help us to better understand plate tectonics. Despite numerous previous studies, it is still unclear how and where an old oceanic plate starts to subduct beneath the other plate. One of the proposed scenarios for nucleation of subduction is plume-induced subduction initiation, which was investigated in detail, using 2-D models, by Ueda et al. (2008). Recently. Gerya et al. (2015), using 3D numerical models, proposed that plume-lithosphere interaction in the Archean led to the subduction initiation and onset of plate tectonic. In this study, we aim to pursue work of Ueda et al. (2008) by incorporation of 3-D thermo-mechanical models to investigate conditions leading to oceanic subduction initiation as a result of thermal-chemical mantle plume-lithosphere interaction in the modern earth. Results of our experiments show four different deformation regimes in response to plume-lithosphere interaction, that are a) self-sustaining subduction initiation where subduction becomes self-sustained, b) freezing subduction initiation where subduction stops at shallow depths, c) slab break-off where subducting circular slab breaks off soon after formation and d) plume underplating where plume does not pass through the lithosphere but spreads beneath it (failed subduction initiation). These different regimes depend on several parameters such as plume's size, composition and temperature, lithospheric brittle/plastic strength, age of the oceanic lithosphere and presence/absence of lithospheric heterogeneities. Results show that subduction initiates and becomes self-sustained when lithosphere is older than 10 Myr and non-dimensional ratio of the plume buoyancy force and lithospheric strength above the plume is higher than 2.

  18. Direct 3D printed shadow mask on Silicon

    NASA Astrophysics Data System (ADS)

    Rahiminejad, S.; Köhler, E.; Enoksson, P.

    2016-10-01

    A 3D printed shadow mask method is presented. The 3D printer prints ABS plastic directly on the wafer, thus avoiding gaps between the wafer and the shadow mask, and deformation during the process. The wafer together with the 3D printed shadow mask was sputtered with Ti and Au. The shadow mask was released by immersion in acetone. The sputtered patches through the shadow mask were compared to the opening of the 3D printed shadow mask and the design dimensions. The patterned Au patches were larger than the printed apertures, however they were smaller than the design widths. The mask was printed in 4 min, the cost is less than one euro cent, and the process is a low temperature process suitable for temperature sensitive components.

  19. 3D geo-database research: Retrospective and future directions

    NASA Astrophysics Data System (ADS)

    Breunig, Martin; Zlatanova, Sisi

    2011-07-01

    3D geo-database research is a promising field to support challenging applications such as 3D urban planning, environmental monitoring, infrastructure management, and early warning or disaster management and response. In these fields, interdisciplinary research in GIScience and related fields is needed to support the modelling, analysis, management, and integration of large geo-referenced data sets, which describe human activities and geophysical phenomena. Geo-databases may serve as platforms to integrate 2D maps, 3D geo-scientific models, and other geo-referenced data. However, current geo-databases do not provide sufficient 3D data modelling and data handling techniques. New 3D geo-databases are needed to handle surface and volume models. This article first presents a 25-year retrospective of geo-database research. Data modelling, standards, and indexing of geo-data are discussed in detail. New directions for the development of 3D geo-databases to open new fields for interdisciplinary research are addressed. Two scenarios in the fields of early warning and emergency response demonstrate the combined management of human and geophysical phenomena. The article concludes with a critical outlook on open research problems.

  20. Numerical model of sonic boom in 3D kinematic turbulence

    NASA Astrophysics Data System (ADS)

    Coulouvrat, François; Luquet, David; Marchiano, Régis

    2015-10-01

    Sonic boom is one of the key issues to be considered in the development of future supersonic or hypersonic civil aircraft concepts. The classical sonic boom, typical for Concorde with an N-wave shape and a ground amplitude of the order of 100 Pa, prevents overland flight. Future concepts target carefully shaped sonic booms with low amplitude weak shocks. However, sonic boom when perceived at the ground level is influenced not only by the aircraft characteristics, but also by atmospheric propagation. In particular, the effect of atmospheric turbulence on sonic boom propagation near the ground is not well characterized. Flight tests performed as early as the 1960s demonstrated that classical sonic booms are sensitive to atmospheric turbulence. However, this sensitivity remains only partially understood. This is related to the fact that i) turbulence is a random process that requires a statistical approach, ii) standard methods used to predict sonic booms, mainly geometrical acoustics based on ray tracing, are inadequate within the turbulent planetary boundary layer. Moreover, the ray theory fails to predict the acoustical field in many areas of interest, such as caustics or shadow zones. These zones are of major interest for sonic boom acceptability (highest levels, lateral extent of zone of impact). These limitations outline the need for a numerical approach that is sufficiently efficient to perform a large number of realizations for a statistical approach, but that goes beyond the limitations of ray theory. With this in view, a 3D one-way numerical method solving a nonlinear scalar wave equation established for heterogeneous, moving and absorbing atmosphere, is used to assess the effects of a 3D kinematic turbulence on sonic boom in various configurations. First, a plane N-wave is propagated in the free field through random realizations of kinematic fluctuations. Then the case of a more realistic Atmospheric Boundary Layer (ABL) is investigated, with a mean

  1. 3D numerical modeling of India-Asia-like collision

    NASA Astrophysics Data System (ADS)

    -Erika Püsök, Adina; Kaus, Boris; Popov, Anton

    2013-04-01

    above a strong mantle lithosphere - the jelly sandwich model (Burov and Watts, 2006). 3D models are thus needed to investigate these hypotheses. However, fully 3D models of the dynamics of continent collision zones have only been developed very recently, and presently most research groups have relied on certain explicit assumptions for their codes. Here, we employ the parallel 3D code LaMEM (Lithosphere and Mantle Evolution Model), with a finite difference staggered grid solver, which is capable of simulating lithospheric deformation while simultaneously taking mantle flow and a free surface into account. We here report on first lithospheric and upper-mantle scale simulations in which the Indian lithosphere is indented into Asia. Acknowledgements. Funding was provided by the European Research Council under the European Community's Seventh Framework Program (FP7/2007-2013) / ERC Grant agreement #258830. Numerical computations have been performed on JUQUEEN of the Jülich high-performance computing center. • Beaumont, C., Jamieson, R.A., Nguyen, M.H., Medvedev, S.E., 2004. Crustal channel flows: 1. Numerical models with applications to the tectonics of the Himalayan-Tibetan orogeny. J. Geophys. Res. 109, B06406. • Burov, E. & Watts, W.S., 2006. The long-term strength of continental lithosphere: "jelly sandwich" or "crème brûlée"?. GSA Today, 16, doi: 10.1130/1052-5173(2006)1016<1134:TLTSOC>1132.1130.CO;1132. • England P., Houseman, G., 1986. Finite strain calculations of continental deformation. 2. Comparison with the India-Asia collision zone. J. Geophys. Res.- Solid Earth and Planets 91 (B3), 3664-3676. • Jackson, J., 2002. Strength of the continental lithosphere: time to abandon the jelly sandwich?. GSA Today, September, 4-10. • Lechmann, S.M., May, D.A., Kaus, B.J.P., Schmalholz, S.M., 2011. Comparing thin-sheet models with 3D multilayer models for continental collision. Geophy. Int. J. doi: 10.1111/j.1365-246X.2011.05164.x • Royden, L.H., Burchfiel, B

  2. Peptide Directed 3D Assembly of Nanoparticles through Biomolecular Interaction

    NASA Astrophysics Data System (ADS)

    Kaur, Prerna

    The current challenge of the 'bottom up' process is the programmed self-assembly of nanoscale building blocks into complex and larger-scale superstructures with unique properties that can be integrated as components in solar cells, microelectronics, meta materials, catalysis, and sensors. Recent trends in the complexity of device design demand the fabrication of three-dimensional (3D) superstructures from multi-nanomaterial components in precise configurations. Bio mimetic assembly is an emerging technique for building hybrid materials because living organisms are efficient, inexpensive, and environmentally benign material generators, allowing low temperature fabrication. Using this approach, a novel peptide-directed nanomaterial assembly technology based on bio molecular interaction of streptavidin and biotin is presented for assembling nanomaterials with peptides for the construction of 3D peptide-inorganic superlattices with defined 3D shape. We took advantage of robust natural collagen triple-helix peptides and used them as nanowire building blocks for 3D peptide-gold nanoparticles superlattice generation. The type of 3D peptide superlattice assembly with hybrid NP building blocks described herein shows potential for the fabrication of complex functional device which demands precise long-range arrangement and periodicity of NPs.

  3. 20 and 3D Numerical Simulations of Flux Cancellation

    NASA Technical Reports Server (NTRS)

    Karpen, Judith T.; DeVore, C.; Antiochos, S. K.; Linton, M. G.

    2009-01-01

    Cancellation of magnetic flux in the solar photosphere and chromosphere has been linked observationally and theoretically to a broad range of solar activity, from filament channel formation to CME initiation. Because this phenomenon is typically measured at only a single layer in the atmosphere, in the radial (line of sight) component of the magnetic field, the actual processes behind this observational signature are ambiguous. It is clear that reconnection is involved in some way, but the location of the reconnection sites and associated connectivity changes remain uncertain in most cases. We are using numerical modeling to demystify flux cancellation, beginning with the simplest possible configuration: a subphotospheric Lundquist flux tube surrounded by a potential field, immersed in a gravitationally stratified atmosphere, spanning many orders of magnitude in plasma beta. In this system, cancellation is driven slowly by a 2-cell circulation pattern imposed in the convection zone, such that the tops of the cells are located around the beta= 1 level (Le., the photosphere) and the flows converge and form a downdraft at the polarity inversion line; note however that no flow is imposed along the neutral line. We will present the results of 2D and 3D MHD-AMR simulations of flux cancellation, in which the flux at the photosphere begins in either an unsheared or sheared state. In all cases, a lOW-lying flux rope is formed by reconnection at the polarity inversion line within a few thousand seconds. The flux rope remains stable and does not rise, however, in contrast to models which do not include the presence of significant mass loading.

  4. 2D and 3D Numerical Simulations of Flux Cancellation

    NASA Technical Reports Server (NTRS)

    Karpen, Judith T.; DeVore, C.; Antiochos, S. K.; Linton, M. G.

    2009-01-01

    Cancellation of magnetic flux in the solar photosphere and chromosphere has been linked observationally and theoretically to a broad range of solar activity, from filament channel formation to CME initiation. Because this phenomenon is typically measured at only a single layer in the atmosphere, in the radial (line of sight) component of the magnetic field, the actual processes behind this observational signature are ambiguous. It is clear that reconnection is involved in some way, but the location of the reconnection sites and associated connectivity changes remain uncertain in most cases. We are using numerical modeling to demystify flux cancellation, beginning with the simplest possible configuration: a subphotospheric Lundquist flux tube surrounded by a potential field, immersed in a gravitationally stratified atmosphere, spanning many orders of magnitude in plasma beta. In this system, cancellation is driven slowly by a 2-cell circulation pattern imposed in the convection zone, such that the tops of the cells are located around the beta=1 level (i.e., the photosphere) and the flows converge and form a downdraft at the polarity inversion line; note however that no flow is imposed along the neutral line. We will present the results of 2D and 3D MHD-AMR simulations of flux cancellation, in which the flux at the photosphere begins in either an unsheared or sheared state. In all cases, a low-lying flux rope is formed by reconnection at the polarity inversion line within a few thousand seconds. The flux rope remains stable and does not rise, however, in contrast to models which do not include the presence of significant mass loading.

  5. Directing Matter: Toward Atomic-Scale 3D Nanofabrication

    SciTech Connect

    Jesse, Stephen; Borisevich, Albina Y.; Fowlkes, Jason D.; Lupini, Andrew R.; Rack, Philip D.; Unocic, Raymond R.; Sumpter, Bobby G.; Kalinin, Sergei V.; Belianinov, Alex; Ovchinnikova, Olga S.

    2016-05-16

    Here we report that enabling memristive, neuromorphic, and quantum based computing as well as efficient mainstream energy storage and conversion technologies requires next generation of materials customized at the atomic scale. This requires full control of atomic arrangement and bonding in three dimensions. The last two decades witnessed substantial industrial, academic, and government research efforts directed towards this goal through various lithographies and scanning probe based methods. These technologies emphasize 2D surface structures, with some limited 3D capability. Recently, a range of focused electron and ion based methods have demonstrated compelling alternative pathways to achieving atomically precise manufacturing of 3D structures in solids, liquids, and at interfaces. Electron and ion microscopies offer a platform that can simultaneously observe dynamic and static structures at the nano and atomic scales, and also induce structural rearrangements and chemical transformation. The addition of predictive modeling or rapid image analytics and feedback enables guiding these in a controlled manner. Here, we review the recent results that used focused electron and ion beams to create free-standing nanoscale 3D structures, radiolysis and the fabrication potential with liquid precursors, epitaxial crystallization of amorphous oxides with atomic layer precision, as well as visualization and control of individual dopant motion within a 3D crystal lattice. These works lay the foundation for new approaches to directing nanoscale level architectures and offer a potential roadmap to full 3D atomic control in materials. Lastly, in this perspective we lay out the gaps that currently constrain the processing range of these platforms, reflect on indirect requirements, such as the integration of large scale data analysis with theory, and discuss future prospects of these technologies.

  6. Directing Matter: Toward Atomic-Scale 3D Nanofabrication.

    PubMed

    Jesse, Stephen; Borisevich, Albina Y; Fowlkes, Jason D; Lupini, Andrew R; Rack, Philip D; Unocic, Raymond R; Sumpter, Bobby G; Kalinin, Sergei V; Belianinov, Alex; Ovchinnikova, Olga S

    2016-06-28

    Enabling memristive, neuromorphic, and quantum-based computing as well as efficient mainstream energy storage and conversion technologies requires the next generation of materials customized at the atomic scale. This requires full control of atomic arrangement and bonding in three dimensions. The last two decades witnessed substantial industrial, academic, and government research efforts directed toward this goal through various lithographies and scanning-probe-based methods. These technologies emphasize 2D surface structures, with some limited 3D capability. Recently, a range of focused electron- and ion-based methods have demonstrated compelling alternative pathways to achieving atomically precise manufacturing of 3D structures in solids, liquids, and at interfaces. Electron and ion microscopies offer a platform that can simultaneously observe dynamic and static structures at the nano- and atomic scales and also induce structural rearrangements and chemical transformation. The addition of predictive modeling or rapid image analytics and feedback enables guiding these in a controlled manner. Here, we review the recent results that used focused electron and ion beams to create free-standing nanoscale 3D structures, radiolysis, and the fabrication potential with liquid precursors, epitaxial crystallization of amorphous oxides with atomic layer precision, as well as visualization and control of individual dopant motion within a 3D crystal lattice. These works lay the foundation for approaches to directing nanoscale level architectures and offer a potential roadmap to full 3D atomic control in materials. In this paper, we lay out the gaps that currently constrain the processing range of these platforms, reflect on indirect requirements, such as the integration of large-scale data analysis with theory, and discuss future prospects of these technologies.

  7. 3D Numerical Simulation on the Rockslide Generated Tsunamis

    NASA Astrophysics Data System (ADS)

    Chuang, M.; Wu, T.; Wang, C.; Chu, C.

    2013-12-01

    The rockslide generated tsunami is one of the most devastating nature hazards. However, the involvement of the moving obstacle and dynamic free-surface movement makes the numerical simulation a difficult task. To describe both the fluid motion and solid movement at the same time, we newly developed a two-way fully-coupled moving solid algorithm with 3D LES turbulent model. The free-surface movement is tracked by volume of fluid (VOF) method. The two-step projection method is adopted to solve the Navier-Stokes type government equations. In the new moving solid algorithm, a fictitious body force is implicitly prescribed in MAC correction step to make the cell-center velocity satisfied with the obstacle velocity. We called this method the implicit velocity method (IVM). Because no extra terms are added to the pressure Poission correction, the pressure field of the fluid part is stable, which is the key of the two-way fluid-solid coupling. Because no real solid material is presented in the IVM, the time marching step is not restricted to the smallest effective grid size. Also, because the fictitious force is implicitly added to the correction step, the resulting velocity is accurate and fully coupled with the resulting pressure field. We validated the IVM by simulating a floating box moving up and down on the free-surface. We presented the time-history obstacle trajectory and compared it with the experimental data. Very accurate result can be seen in terms of the oscillating amplitude and the period (Fig. 1). We also presented the free-surface comparison with the high-speed snapshots. At the end, the IVM was used to study the rock-slide generated tsunamis (Liu et al., 2005). Good validations on the slide trajectory and the free-surface movement will be presented in the full paper. From the simulation results (Fig. 2), we observed that the rockslide generated waves are manly caused by the rebounding waves from two sides of the sliding rock after the water is dragging

  8. Numerical Results of 3-D Modeling of Moon Accumulation

    NASA Astrophysics Data System (ADS)

    Khachay, Yurie; Anfilogov, Vsevolod; Antipin, Alexandr

    2014-05-01

    For the last time for the model of the Moon usually had been used the model of mega impact in which the forming of the Earth and its sputnik had been the consequence of the Earth's collision with the body of Mercurial mass. But all dynamical models of the Earth's accumulation and the estimations after the Pb-Pb system, lead to the conclusion that the duration of the planet accumulation was about 1 milliard years. But isotopic results after the W-Hf system testify about a very early (5-10) million years, dividing of the geochemical reservoirs of the core and mantle. In [1,2] it is shown, that the account of energy dissipating by the decay of short living radioactive elements and first of all Al26,it is sufficient for heating even small bodies with dimensions about (50-100) km up to the iron melting temperature and can be realized a principal new differentiation mechanism. The inner parts of the melted preplanets can join and they are mainly of iron content, but the cold silicate fragments return to the supply zone and additionally change the content of Moon forming to silicates. Only after the increasing of the gravitational radius of the Earth, the growing area of the future Earth's core can save also the silicate envelope fragments [3]. For understanding the further system Earth-Moon evolution it is significant to trace the origin and evolution of heterogeneities, which occur on its accumulation stage.In that paper we are modeling the changing of temperature,pressure,velocity of matter flowing in a block of 3d spherical body with a growing radius. The boundary problem is solved by the finite-difference method for the system of equations, which include equations which describe the process of accumulation, the Safronov equation, the equation of impulse balance, equation Navier-Stocks, equation for above litho static pressure and heat conductivity in velocity-pressure variables using the Businesque approach.The numerical algorithm of the problem solution in velocity

  9. Numerical Results of Earth's Core Accumulation 3-D Modelling

    NASA Astrophysics Data System (ADS)

    Khachay, Yurie; Anfilogov, Vsevolod

    2013-04-01

    For a long time as a most convenient had been the model of mega impact in which the early forming of the Earth's core and mantle had been the consequence of formed protoplanet collision with the body of Mercurial mass. But all dynamical models of the Earth's accumulation and the estimations after the Pb-Pb system, lead to the conclusion that the duration of the planet accumulation was about 1 milliard years. But isotopic results after the W-Hf system testify about a very early (5-10) million years, dividing of the geochemical reservoirs of the core and mantle. In [1,3] it is shown, that the account of energy dissipating by the decay of short living radioactive elements and first of all Al,it is sufficient for heating even small bodies with dimensions about (50-100) km up to the iron melting temperature and can be realized a principal new differentiation mechanism. The inner parts of the melted preplanets can join and they are mainly of iron content, but the cold silicate fragments return to the supply zone. Only after the increasing of the gravitational radius, the growing area of the future core can save also the silicate envelope fragments. All existing dynamical accumulation models are constructed by using a spherical-symmetrical model. Hence for understanding the further planet evolution it is significant to trace the origin and evolution of heterogeneities, which occur on the planet accumulation stage. In that paper we are modeling distributions of temperature, pressure, velocity of matter flowing in a block of 3D- spherical body with a growing radius. The boundary problem is solved by the finite-difference method for the system of equations, which include equations which describe the process of accumulation, the Safronov equation, the equation of impulse balance, equation Navier-Stocks, equation for above litho static pressure and heat conductivity in velocity-pressure variables using the Businesque approach. The numerical algorithm of the problem solution in

  10. 3D numerical simulations of vesicle and inextensible capsule dynamics

    NASA Astrophysics Data System (ADS)

    Farutin, Alexander; Biben, Thierry; Misbah, Chaouqi

    2014-10-01

    Vesicles are locally-inextensible fluid membranes, capsules are endowed with in-plane shear elasticity mimicking the cytoskeleton of red blood cells (RBCs), but are extensible, while RBCs are inextensible. We use boundary integral (BI) methods based on the Green function techniques to model and solve numerically their dynamics. We regularize the single layer integral by subtraction of exact identities for the terms involving the normal and the tangential components of the force. The stability and precision of BI calculation is enhanced by taking advantage of additional quadrature nodes located in vertices of an auxiliary mesh, constructed by a standard refinement procedure from the main mesh. We extend the partition of unity technique to boundary integral calculation on triangular meshes. The proposed algorithm offers the same treatment of near-singular integration regardless whether the source and the target points belong to the same surface or not. Bending forces are calculated by using expressions derived from differential geometry. Membrane incompressibility is handled by using two penalization parameters per suspended entity: one for deviation of the global area from prescribed value and another for the sum of squares of local strains defined on each vertex. Extensible or inextensible capsules, a model of RBC, are studied by storing the position in the reference configuration for each vertex. The elastic force is then calculated by direct variation of the elastic energy. Various nonequilibrium physical examples on vesicles and capsules will be presented and the convergence and precision tests highlighted. Overall, a good convergence is observed with numerical error inversely proportional to the number of vertices used for surface discretization, the highest order of convergence allowed by piece-wise linear interpolation of the surface.

  11. Directing Matter: Toward Atomic-Scale 3D Nanofabrication

    DOE PAGES

    Jesse, Stephen; Borisevich, Albina Y.; Fowlkes, Jason D.; ...

    2016-05-16

    Here we report that enabling memristive, neuromorphic, and quantum based computing as well as efficient mainstream energy storage and conversion technologies requires next generation of materials customized at the atomic scale. This requires full control of atomic arrangement and bonding in three dimensions. The last two decades witnessed substantial industrial, academic, and government research efforts directed towards this goal through various lithographies and scanning probe based methods. These technologies emphasize 2D surface structures, with some limited 3D capability. Recently, a range of focused electron and ion based methods have demonstrated compelling alternative pathways to achieving atomically precise manufacturing of 3Dmore » structures in solids, liquids, and at interfaces. Electron and ion microscopies offer a platform that can simultaneously observe dynamic and static structures at the nano and atomic scales, and also induce structural rearrangements and chemical transformation. The addition of predictive modeling or rapid image analytics and feedback enables guiding these in a controlled manner. Here, we review the recent results that used focused electron and ion beams to create free-standing nanoscale 3D structures, radiolysis and the fabrication potential with liquid precursors, epitaxial crystallization of amorphous oxides with atomic layer precision, as well as visualization and control of individual dopant motion within a 3D crystal lattice. These works lay the foundation for new approaches to directing nanoscale level architectures and offer a potential roadmap to full 3D atomic control in materials. Lastly, in this perspective we lay out the gaps that currently constrain the processing range of these platforms, reflect on indirect requirements, such as the integration of large scale data analysis with theory, and discuss future prospects of these technologies.« less

  12. 3-D numerical simulations of volcanic ash transport and deposition

    NASA Astrophysics Data System (ADS)

    Suzuki, Y. J.; Koyaguchi, T.

    2012-12-01

    During an explosive volcanic eruption, volcanic gas and pyroclasts are ejected from the volcanic vent. The pyroclasts are carried up within a convective plume, advected by the surrounding wind field, and sediment on the ground depending on their terminal velocity. The fine ash are expected to have atmospheric residence, whereas the coarser particles form fall deposits. Accurate modeling of particle transport and deposition is of critical importance from the viewpoint of disaster prevention. Previously, some particle-tracking models (e.g., PUFF) and advection-diffusion models (e.g., TEPHRA2 and FALL3D) tried to forecast particle concentration in the atmosphere and particle loading at ground level. However, these models assumed source conditions (the grain-size distribution, plume height, and mass release location) based on the simple 1-D model of convective plume. In this study, we aim to develop a new 3-D model which reproduces both of the dynamics of convective plume and the ash transport. The model is designed to describe the injection of eruption cloud and marker particles from a circular vent above a flat surface into the stratified atmosphere. Because the advection is the predominant mechanism of particle transport near the volcano, the diffusive process is not taken into account in this model. The distribution of wind velocity is given as an initial condition. The model of the eruption cloud dynamics is based on the 3-D time-dependent model of Suzuki et al. (2005). We apply a pseudo-gas model to calculate the eruption cloud dynamics: the effect of particle separation on the cloud dynamics is not considered. In order to reproduce the drastic change of eruption cloud density, we change the effective gas constant and heat capacity of the mixture in the equation of state for ideal gases with the mixing ratio between the ejected material and entrained air. In order to calculate the location and movement of ash particles, the present model employs Lagrangian marker

  13. Numerical grid generation in 3D Euler-flow simulation

    NASA Astrophysics Data System (ADS)

    Boerstoel, J. W.

    1988-04-01

    The technical problems with grid generation are analyzed and an overview of proposed solutions is given. The usefulness of grid-generation techniques, for the numerical simulation of Euler (and Navier-Stokes) flows around complex three-dimensional aerodynamic configurations, is illustrated. It is shown that the core of the grid-generation problem is a topology problem. The following remarks are sketched: grid generation is a subtask in a numerical simulation of a flow in industrial and research environments; the design requirements of a grid generation concern the geometrical imput, the desired grid as output, the technical means to control grid resolution and quality and turnaround time performance; the construction of a blocked grid can be subdivided in a block-decomposition task and a grid-point distribution task. A technique for using connectivity relations to define conventions about local coordinate systems in edges, faces and blocks is presented. Experiences are reported and an example concerning a 96-blocked grid around a complex aerodynamic configuration is given. Concepts for improvements in the presented technique are discussed.

  14. Numerical simulation of 3-D Benard convection with gravitational modulation

    NASA Technical Reports Server (NTRS)

    Biringen, S.; Peltier, L. J.

    1990-01-01

    In this numerical study, randomly and sinusoidally modulated gravitational fields imposed on three-dimensional Rayleigh-Benard convection are investigated in an effort to understand the effects of vibration (G-Jitter) on fluid systems. The time-dependent, Navier-Stokes equations and the energy equation with Boussinesq approximations are solved by a semi-implicit, pseudospectral procedure. An analysis of energy balances indicates that with increasing modulation amplitude, transition from synchronous to relaxation oscillation goes through the subharmonic response. Random modulations are found to be less stabilizing than sinusoidal and are shown to impose three-dimensionality on the flow for some parameter ranges both at terrestrial and zero base gravity conditions.

  15. Numerical and measured data from the 3D salt canopy physical modeling project

    SciTech Connect

    Bradley, C.; House, L.; Fehler, M.; Pearson, J.; TenCate, J.; Wiley, R.

    1997-11-01

    The evolution of salt structures in the Gulf of Mexico have been shown to provide a mechanism for the trapping of significant hydrocarbon reserves. Most of these structures have complex geometries relative to the surrounding sedimentary layers. This aspect in addition to high velocities within the salt tend to scatter and defocus seismic energy and make imaging of subsalt lithology extremely difficult. An ongoing program the SEG/EAEG modeling project (Aminzadeh et al. 1994a: Aminzadeh et al. 1994b: Aminzadeh et al. 1995), and a follow-up project funded as part of the Advanced Computational Technology Initiative (ACTI) (House et al. 1996) have sought to investigate problems with imaging beneath complex salt structures using numerical modeling and more recently, construction of a physical model patterned after the numerical subsalt model (Wiley and McKnight. 1996). To date, no direct comparison of the numerical and physical aspects of these models has been attempted. We present the results of forward modeling a numerical realization of the 3D salt canopy physical model with the French Petroleum Institute (IFP) acoustic finite difference algorithm used in the numerical subsalt tests. We compare the results from the physical salt canopy model, the acoustic modeling of the physical/numerical model and the original numerical SEG/EAEG Salt Model. We will be testing the sensitivity of migration to the presence of converted shear waves and acquisition geometry.

  16. Numerical modelling of gravel unconstrained flow experiments with the DAN3D and RASH3D codes

    NASA Astrophysics Data System (ADS)

    Sauthier, Claire; Pirulli, Marina; Pisani, Gabriele; Scavia, Claudio; Labiouse, Vincent

    2015-12-01

    Landslide continuum dynamic models have improved considerably in the last years, but a consensus on the best method of calibrating the input resistance parameter values for predictive analyses has not yet emerged. In the present paper, numerical simulations of a series of laboratory experiments performed at the Laboratory for Rock Mechanics of the EPF Lausanne were undertaken with the RASH3D and DAN3D numerical codes. They aimed at analysing the possibility to use calibrated ranges of parameters (1) in a code different from that they were obtained from and (2) to simulate potential-events made of a material with the same characteristics as back-analysed past-events, but involving a different volume and propagation path. For this purpose, one of the four benchmark laboratory tests was used as past-event to calibrate the dynamic basal friction angle assuming a Coulomb-type behaviour of the sliding mass, and this back-analysed value was then used to simulate the three other experiments, assumed as potential-events. The computational findings show good correspondence with experimental results in terms of characteristics of the final deposits (i.e., runout, length and width). Furthermore, the obtained best fit values of the dynamic basal friction angle for the two codes turn out to be close to each other and within the range of values measured with pseudo-dynamic tilting tests.

  17. NuSol - Numerical solver for the 3D stationary nuclear Schrödinger equation

    NASA Astrophysics Data System (ADS)

    Graen, Timo; Grubmüller, Helmut

    2016-01-01

    The classification of short hydrogen bonds depends on several factors including the shape and energy spacing between the nuclear eigenstates of the hydrogen. Here, we describe the NuSol program in which three classes of algorithms were implemented to solve the 1D, 2D and 3D time independent nuclear Schrödinger equation. The Schrödinger equation was solved using the finite differences based Numerov's method which was extended to higher dimensions, the more accurate pseudo-spectral Chebyshev collocation method and the sinc discrete variable representation by Colbert and Miller. NuSol can be applied to solve the Schrödinger equation for arbitrary analytical or numerical potentials with focus on nuclei bound by the potential of their molecular environment. We validated the methods against literature values for the 2D Henon-Heiles potential, the 3D linearly coupled sextic oscillators and applied them to study hydrogen bonding in the malonaldehyde derivate 4-cyano-2,2,6,6-tetramethyl-3,5-heptanedione. With NuSol, the extent of nuclear delocalization in a given molecular potential can directly be calculated without relying on linear reaction coordinates in 3D molecular space.

  18. Vinculin Regulates Directionality and Cell Polarity in 2D, 3D Matrix and 3D Microtrack Migration.

    PubMed

    Rahman, Aniqua; Carey, Shawn P; Kraning-Rush, Casey M; Goldblatt, Zachary E; Bordeleau, Francois; Lampi, Marsha C; Lin, Deanna Y; García, Andrés J; Reinhart-King, Cynthia A

    2016-03-09

    During metastasis, cells can use proteolytic activity to form tube-like "microtracks" within the extracellular matrix (ECM). Using these microtracks, cells can migrate unimpeded through the stroma. To investigate the molecular mechanisms of microtrack migration, we developed an in vitro 3D micromolded collagen platform. When in microtracks, cells tend to migrate unidirectionally. Since focal adhesions are the primary mechanism by which cells interact with the ECM, we examined the roles of several focal adhesion molecules in driving unidirectional motion. Vinculin knockdown results in the repeated reversal of migration direction compared with control cells. Tracking the position of the Golgi centroid relative to the position of the nucleus centroid reveals that vinculin knockdown disrupts cell polarity in microtracks. Vinculin also directs migration on 2D substrates and in 3D uniform collagen matrices, indicated by reduced speed, shorter net displacement and decreased directionality in vinculin-deficient cells. In addition, vinculin is necessary for Focal Adhesion Kinase (FAK) activation in 3D as vinculin knockdown results in reduced FAK activation in both 3D uniform collagen matrices and microtracks, but not on 2D substrates, and accordingly, FAK inhibition halts cell migration in 3D microtracks. Together, these data indicate that vinculin plays a key role in polarization during migration.

  19. Cardiac 3D Printing and its Future Directions.

    PubMed

    Vukicevic, Marija; Mosadegh, Bobak; Min, James K; Little, Stephen H

    2017-02-01

    Three-dimensional (3D) printing is at the crossroads of printer and materials engineering, noninvasive diagnostic imaging, computer-aided design, and structural heart intervention. Cardiovascular applications of this technology development include the use of patient-specific 3D models for medical teaching, exploration of valve and vessel function, surgical and catheter-based procedural planning, and early work in designing and refining the latest innovations in percutaneous structural devices. In this review, we discuss the methods and materials being used for 3D printing today. We discuss the basic principles of clinical image segmentation, including coregistration of multiple imaging datasets to create an anatomic model of interest. With applications in congenital heart disease, coronary artery disease, and surgical and catheter-based structural disease, 3D printing is a new tool that is challenging how we image, plan, and carry out cardiovascular interventions.

  20. Effect of Frictions on the Ballistic Performance of a 3D Warp Interlock Fabric: Numerical Analysis

    NASA Astrophysics Data System (ADS)

    Ha-Minh, Cuong; Boussu, François; Kanit, Toufik; Crépin, David; Imad, Abdellatif

    2012-06-01

    3D interlock woven fabrics are promising materials to replace the 2D structures in the field of ballistic protection. The structural complexity of this material caused many difficulties in numerical modeling. This paper presents a new tool that permits to generate a geometry model of any woven fabric, then, mesh this model in shell or solid elements, and apply the mechanical properties of yarns to them. The tool shows many advantages over existing software. It is very handy in use with an organization of the functions in menu and using a graphic interface. It can describe correctly the geometry of all textile woven fabrics. With this tool, the orientation of the local axes of finite elements following the yarn direction facilitates defining the yarn mechanical properties in a numerical model. This tool can be largely applied because it is compatible with popular finite element codes such as Abaqus, Ansys, Radioss etc. Thanks to this tool, a finite element model was carried out to describe a ballistic impact on a 3D warp interlock Kevlar KM2® fabric. This work focuses on studying the effect of friction onto the ballistic impact behavior of this textile interlock structure. Results showed that the friction among yarns affects considerably on the impact behavior of this fabric. The effect of the friction between projectile and yarn is less important. The friction plays an important role in keeping the fabric structural stability during the impact event. This phenomenon explained why the projectile is easier to penetrate this 3D warp interlock fabric in the no-friction case. This result also indicates that the ballistic performance of the interlock woven fabrics can be improved by using fibers with great friction coefficients.

  1. Multiscale 3D manufacturing: combining thermal extrusion printing with additive and subtractive direct laser writing

    NASA Astrophysics Data System (ADS)

    Malinauskas, Mangirdas; Lukoševičius, Laurynas; MackevičiÅ«tÄ--, DovilÄ--; BalčiÅ«nas, Evaldas; RekštytÄ--, Sima; Paipulas, Domas

    2014-05-01

    A novel approach for efficient manufacturing of three-dimensional (3D) microstructured scaffolds designed for cell studies and tissue engineering applications is presented. A thermal extrusion (fused filament fabrication) 3D printer is employed as a simple and low-cost tabletop device enabling rapid materialization of CAD models out of biocompatible and biodegradable polylactic acid (PLA). Here it was used to produce cm- scale microporous (pore size varying from 100 to 400 µm) scaffolds. The fabricated objects were further laser processed in a direct laser writing (DLW) subtractive (ablation) and additive (lithography) manners. The first approach enables precise surface modification by creating micro-craters, holes and grooves thus increasing the surface roughness. An alternative way is to immerse the 3D PLA scaffold in a monomer solution and use the same DLW setup to refine its inner structure by fabricating dots, lines or a fine mesh on top as well as inside the pores of previously produced scaffolds. The DLW technique is empowered by ultrafast lasers - it allows 3D structuring with high spatial resolution in a great variety of photosensitive materials. Structure geometry on macro- to micro- scales could be finely tuned by combining these two fabrication techniques. Such artificial 3D substrates could be used for cell growth or as biocompatible-biodegradable implants. This combination of distinct material processing techniques enables rapid fabrication of diverse functional micro- featured and integrated devices. Hopefully, the proposed approach will find numerous applications in the field of ms, microfluidics, microoptics and many others.

  2. Crashdynamics with DYNA3D: Capabilities and research directions

    NASA Technical Reports Server (NTRS)

    Whirley, Robert G.; Engelmann, Bruce E.

    1993-01-01

    The application of the explicit nonlinear finite element analysis code DYNA3D to crashworthiness problems is discussed. Emphasized in the first part of this work are the most important capabilities of an explicit code for crashworthiness analyses. The areas with significant research promise for the computational simulation of crash events are then addressed.

  3. Directionality in laser fabrication of 3D graphitic microwires in diamond

    NASA Astrophysics Data System (ADS)

    Sun, B.; Salter, P. S.; Booth, M. J.

    2016-03-01

    Graphitic wires embedded beneath the surface of single crystal diamond are promising for a variety of applications. Through a combination of ultra short (femtosecond) pulsed fabrication, high numerical aperture focusing and adaptive optics, graphitic wires can be written along any 3D path. Here, we demonstrate a non-reciprocal directional dependence to the graphitization process: the features are distinct when the fabrication direction is reversed. The non-reciprocal effects are significantly determined by the laser power, the fabrication speed, the light polarization and pulse front tilt. The influences of these factors are studied.

  4. Temperature distributions in the laser-heated diamond anvil cell from 3-D numerical modeling

    SciTech Connect

    Rainey, E. S. G.; Kavner, A.; Hernlund, J. W.

    2013-11-28

    We present TempDAC, a 3-D numerical model for calculating the steady-state temperature distribution for continuous wave laser-heated experiments in the diamond anvil cell. TempDAC solves the steady heat conduction equation in three dimensions over the sample chamber, gasket, and diamond anvils and includes material-, temperature-, and direction-dependent thermal conductivity, while allowing for flexible sample geometries, laser beam intensity profile, and laser absorption properties. The model has been validated against an axisymmetric analytic solution for the temperature distribution within a laser-heated sample. Example calculations illustrate the importance of considering heat flow in three dimensions for the laser-heated diamond anvil cell. In particular, we show that a “flat top” input laser beam profile does not lead to a more uniform temperature distribution or flatter temperature gradients than a wide Gaussian laser beam.

  5. Shear Behavior of 3D Woven Hollow Integrated Sandwich Composites: Experimental, Theoretical and Numerical Study

    NASA Astrophysics Data System (ADS)

    Zhou, Guangming; Liu, Chang; Cai, Deng'an; Li, Wenlong; Wang, Xiaopei

    2016-11-01

    An experimental, theoretical and numerical investigation on the shear behavior of 3D woven hollow integrated sandwich composites was presented in this paper. The microstructure of the composites was studied, then the shear modulus and load-deflection curves were obtained by double lap shear tests on the specimens in two principal directions of the sandwich panels, called warp and weft. The experimental results showed that the shear modulus of the warp was higher than that of the weft and the failure occurred in the roots of piles. A finite element model was established to predict the shear behavior of the composites. The simulated results agreed well with the experimental data. Simultaneously, a theoretical method was developed to predict the shear modulus. By comparing with the experimental data, the accuracy of the theoretical method was verified. The influence of structural parameters on shear modulus was also discussed. The higher yarn number, yarn density and dip angle of the piles could all improve the shear modulus of 3D woven hollow integrated sandwich composites at different levels, while the increasing height would decrease the shear modulus.

  6. A Parallel Numerical Algorithm To Solve Linear Systems Of Equations Emerging From 3D Radiative Transfer

    NASA Astrophysics Data System (ADS)

    Wichert, Viktoria; Arkenberg, Mario; Hauschildt, Peter H.

    2016-10-01

    Highly resolved state-of-the-art 3D atmosphere simulations will remain computationally extremely expensive for years to come. In addition to the need for more computing power, rethinking coding practices is necessary. We take a dual approach by introducing especially adapted, parallel numerical methods and correspondingly parallelizing critical code passages. In the following, we present our respective work on PHOENIX/3D. With new parallel numerical algorithms, there is a big opportunity for improvement when iteratively solving the system of equations emerging from the operator splitting of the radiative transfer equation J = ΛS. The narrow-banded approximate Λ-operator Λ* , which is used in PHOENIX/3D, occurs in each iteration step. By implementing a numerical algorithm which takes advantage of its characteristic traits, the parallel code's efficiency is further increased and a speed-up in computational time can be achieved.

  7. The 3D Elevation Program: summary of program direction

    USGS Publications Warehouse

    Snyder, Gregory I.

    2012-01-01

    The 3D Elevation Program (3DEP) initiative responds to a growing need for high-quality topographic data and a wide range of other three-dimensional representations of the Nation's natural and constructed features. The National Enhanced Elevation Assessment (NEEA), which was completed in 2011, clearly documented this need within government and industry sectors. The results of the NEEA indicated that enhanced elevation data have the potential to generate $13 billion in new benefits annually. The benefits apply to food risk management, agriculture, water supply, homeland security, renewable energy, aviation safety, and other areas. The 3DEP initiative was recommended by the National Digital Elevation Program and its 12 Federal member agencies and was endorsed by the National States Geographic Information Council (NSGIC) and the National Geospatial Advisory Committee (NGAC).

  8. Towards automated 3D finite element modeling of direct fiber reinforced composite dental bridge.

    PubMed

    Li, Wei; Swain, Michael V; Li, Qing; Steven, Grant P

    2005-07-01

    An automated 3D finite element (FE) modeling procedure for direct fiber reinforced dental bridge is established on the basis of computer tomography (CT) scan data. The model presented herein represents a two-unit anterior cantilever bridge that includes a maxillary right incisor as an abutment and a maxillary left incisor as a cantilever pontic bonded by adhesive and reinforced fibers. The study aims at gathering fundamental knowledge for design optimization of this type of innovative composite dental bridges. To promote the automatic level of numerical analysis and computational design of new dental biomaterials, this report pays particular attention to the mathematical modeling, mesh generation, and validation of numerical models. To assess the numerical accuracy and to validate the model established, a convergence test and experimental verification are also presented.

  9. 3D geomechanical-numerical modelling of the absolute stress state for geothermal reservoir exploration

    NASA Astrophysics Data System (ADS)

    Reiter, Karsten; Heidbach, Oliver; Moeck, Inga

    2013-04-01

    For the assessment and exploration of a potential geothermal reservoir, the contemporary in-situ stress is of key importance in terms of well stability and orientation of possible fluid pathways. However, available data, e.g. Heidbach et al. (2009) or Zang et al. (2012), deliver only point wise information of parts of the six independent components of the stress tensor. Moreover most measurements of the stress orientation and magnitude are done for hydrocarbon industry obvious in shallow depth. Interpolation across long distances or extrapolation into depth is unfavourable, because this would ignore structural features, inhomogeneity's in the crust or other local effects like topography. For this reasons geomechanical numerical modelling is the favourable method to quantify orientations and magnitudes of the 3D stress field for a geothermal reservoir. A geomechanical-numerical modelling, estimating the 3D absolute stress state, requires the initial stress state as model constraints. But in-situ stress measurements within or close by a potential reservoir are rare. For that reason a larger regional geomechanical-numerical model is necessary, which derive boundary conditions for the wanted local reservoir model. Such a large scale model has to be tested against in-situ stress measurements, orientations and magnitudes. Other suitable and available data, like GPS measurements or fault slip rates are useful to constrain kinematic boundary conditions. This stepwise approach from regional to local scale takes all stress field factors into account, from first over second up to third order. As an example we present a large scale crustal and upper mantle 3D-geomechanical-numerical model of the Alberta Basin and the surroundings, which is constructed to describe continuously the full stress tensor. In-situ stress measurements are the most likely data, because they deliver the most direct information's of the stress field and they provide insights into different depths, a

  10. Direct fabrication of silicone lenses with 3D printed parts

    NASA Astrophysics Data System (ADS)

    Kamal, Tahseen; Watkins, Rachel; Cen, Zijian; Lee, W. M.

    2016-11-01

    The traditional process of making glass lenses requires grinding and polishing of the material which is a tedious and sensitive process. Existing polymer lens making techniques, such as high temperature reflow techniques, have been significantly simple lens making processes which cater well to customer industry. Recently, the use of UV-curing liquid lens has ushered in customized lens making (Printed Optics), but contains undesirable yellowing effects. Polydimethylsiloxane (PDMS) is a transparent polymer curable at low temperature (<100°C) provides an alternative to lens making. In this work, we showed that PDMS lenses are fabricated using single silicone droplets which are formed in a guided and controlled passive manner using 3D printed tools. These silicone lenses have attributes such as smoothness of curvature, resilience to temperature change, low optical aberrations, high transparency (>95%) and minimal aging (yellowing). Moreover, these lenses have a range of focal lengths (3.5 mm to 14.5 mm as well as magnifications (up to 160X). In addition, we created smartphone attachment to turn smart device (tablet or smartphone) into a low-powered microscope. In future we plan to extend this method to produce microlens array.

  11. Improvements to the RELAP5-3D Nearly-Implicit Numerical Scheme

    SciTech Connect

    Richard A. Riemke; Walter L. Weaver; RIchard R. Schultz

    2005-05-01

    The RELAP5-3D computer program has been improved with regard to its nearly-implicit numerical scheme for twophase flow and single-phase flow. Changes were made to the nearly-implicit numerical scheme finite difference momentum equations as follows: (1) added the velocity flip-flop mass/energy error mitigation logic, (2) added the modified Henry-Fauske choking model, (3) used the new time void fraction in the horizontal stratification force terms and gravity head, and (4) used an implicit form of the artificial viscosity. The code modifications allow the nearly-implicit numerical scheme to be more implicit and lead to enhanced numerical stability.

  12. Direct inversion of digital 3D Fraunhofer holography maps.

    PubMed

    Podorov, Sergei G; Förster, Eckhart

    2016-01-20

    Differential Fourier holography (DFH) gives an exact mathematical solution of the inverse problem of diffraction in the Fraunhofer regime. After the first publication [Opt. Express15, 9954 (2007)], DFH was successfully applied in many experiments to obtain amplitude and phase information about two-dimensional images. In this paper, we demonstrate numerically the possibility to apply DFH also for investigation of unknown three-dimensional objects. The first simulation is made for a double-spiral structure plus a line as a reference object.

  13. Numerical simulations and vorticity dynamics of self-propelled swimming of 3D bionic fish

    NASA Astrophysics Data System (ADS)

    Xin, ZhiQiang; Wu, ChuiJie

    2012-02-01

    Numerical simulations and the control of self-propelled swimming of three-dimensional bionic fish in a viscous flow and the mechanism of fish swimming are carried out in this study, with a 3D computational fluid dynamics package, which includes the immersed boundary method and the volume of fluid method, the adaptive multi-grid finite volume method, and the control strategy of fish swimming. Firstly, the mechanism of 3D fish swimming was studied and the vorticity dynamics root was traced to the moving body surface by using the boundary vorticity-flux theory. With the change of swimming speed, the contributions of the fish body and caudal fin to thrust are analyzed quantitatively. The relationship between vortex structures of fish swimming and the forces exerted on the fish body are also given in this paper. Finally, the 3D wake structure of self-propelled swimming of 3D bionic fish is presented. The in-depth analysis of the 3D vortex structure in the role of 3D biomimetic fish swimming is also performed.

  14. Transient 3D numerical simulations of column collapse and pyroclastic density current scenarios at Vesuvius

    NASA Astrophysics Data System (ADS)

    Esposti Ongaro, T.; Neri, A.; Menconi, G.; de'Michieli Vitturi, M.; Marianelli, P.; Cavazzoni, C.; Erbacci, G.; Baxter, P. J.

    2008-12-01

    Numerical simulations of column collapse and pyroclastic density current (PDC) scenarios at Vesuvius were carried out using a transient 3D flow model based on multiphase transport laws. The model describes the dynamics of the collapse as well as the effects of the 3D topography of the volcano on PDC propagation. Source conditions refer to a medium-scale sub-Plinian event and consider a pressure-balanced jet. Simulation results provide new insights into the complex dynamics of these phenomena. In particular: 1) column collapse can be characterized by different regimes, from incipient collapse to partial or nearly total collapse, thus confirming the possibility of a transitional field of behaviour of the column characterized by the contemporaneous and/or intermittent occurrence of ash fallout and PDCs; 2) the collapse regime can be characterized by its fraction of eruptive mass reaching the ground and generating PDCs; 3) within the range of the investigated source conditions, the propagation and hazard potential of PDCs appear to be directly correlated with the flow-rate of the mass collapsing to the ground, rather than to the collapse height of the column (this finding is in contrast with predictions based on the energy-line concept, which simply correlates the PDC runout and kinetic energy with the collapse height of the column); 4) first-order values of hazard variables associated with PDCs (i.e., dynamic pressure, temperature, airborne ash concentration) can be derived from simulation results, thereby providing initial estimates for the quantification of damage scenarios; 5) for scenarios assuming a location of the central vent coinciding with that of the present Gran Cono, Mount Somma significantly influences the propagation of PDCs, largely reducing their propagation in the northern sector, and diverting mass toward the west and southeast, accentuating runouts and hazard variables for these sectors; 6) the 2D modelling approximation can force an artificial

  15. The program FANS-3D (finite analytic numerical simulation 3-dimensional) and its applications

    NASA Technical Reports Server (NTRS)

    Bravo, Ramiro H.; Chen, Ching-Jen

    1992-01-01

    In this study, the program named FANS-3D (Finite Analytic Numerical Simulation-3 Dimensional) is presented. FANS-3D was designed to solve problems of incompressible fluid flow and combined modes of heat transfer. It solves problems with conduction and convection modes of heat transfer in laminar flow, with provisions for radiation and turbulent flows. It can solve singular or conjugate modes of heat transfer. It also solves problems in natural convection, using the Boussinesq approximation. FANS-3D was designed to solve heat transfer problems inside one, two and three dimensional geometries that can be represented by orthogonal planes in a Cartesian coordinate system. It can solve internal and external flows using appropriate boundary conditions such as symmetric, periodic and user specified.

  16. 3D numerical simulation analysis of passive drag near free surface in swimming

    NASA Astrophysics Data System (ADS)

    Zhan, Jie-min; Li, Tian-zeng; Chen, Xue-bin; Li, Yok-sheung; Wai, Wing-hong Onyx

    2015-04-01

    The aim of this work is to build a 3D numerical model to study the characteristics of passive drag on competitive swimmers taking into account the impact of the free surface. This model solves the 3D incompressible Navier-Stokes equations using RNG k- ɛ turbulence closure. The volume of fluid (VOF) method is used to locate the free surface. The 3D virtual model is created by Computer Aided Industrial Design (CAID) software, Rhinoceros. Firstly, a specific posture of swimming is studied. The simulation results are in good agreement with the data from mannequin towing experiments. The effects of a swimmer's arms and legs positions on swimming performance are then studied. Finally, it is demonstrated that the present method is capable of simulating gliding near the free surface.

  17. Wind forcing of upland lake hydrodynamics: implementation and validation of a 3D numerical model

    NASA Astrophysics Data System (ADS)

    Morales, L.; French, J.; Burningham, H.; Evans, C.; Battarbee, R.

    2010-12-01

    Upland lakes act as important archives of environmental change, yet inferences based on the analysis of sediment cores are frequently compromised by an incomplete understanding of the hydrodynamic processes controlling the distribution and completeness of lake sediment sequences and their linkages to wider environmental factors. Many upland lakes are characterized by complex vertical and horizontal circulation patterns induced by the action of wind on the water surface. Wind forcing is important not only for the resuspension of bottom sediments in shallow marginal areas, but may also control the broader distribution of sediment accumulation. The work presented here represents the first stage of a project aimed at elucidating the linkages between wind forcing and the distribution of bottom sediments in upland lakes and the extent to which simple 'sediment focusing' models provide an adequate basis for predicting optimal locations for the acquisition of core samples for palaeolimnological analysis. As a first step, a 3D numerical hydrodynamic model is implemented for Llyn Conwy, a small oligotrophic upland lake in North Wales, UK. This utilises the community ocean model, FVCOM, that solves the Navier-Stokes equations in 3D on an unstructured triangular mesh using the finite volume method. A new graphical user interface has been developed for FVCOM to facilitate pre- and post-processing of lake modelling problems. At Llyn Conwy, the model is forced using local meteorological data and validated against vertical temperature profiles recorded by a long-term buoy deployment and short-term observations of vertical current structure measured using an upward-looking acoustic doppler profiler and surface circulation obtained from GPS drifters. Challenges in the application of FVCOM to a small lake include the design of a mesh that ensures numerical stability whilst resolving a complex bathymetry, and the need for careful treatment of model 'spin-up'. Once calibrated, the

  18. Impact of 3D root uptake on solute transport: a numerical study

    NASA Astrophysics Data System (ADS)

    Schröder, N.; Javaux, M.; Vanderborght, J.; Steffen, B.; Vereecken, H.

    2011-12-01

    Plant transpiration is an important component of the hydrological cycle. Through root water uptake, plants do not only affect the 3D soil water flow velocity distribution, but also solute movement in soil. This numerical study aims at investigating how solute fate is impacted by root uptake using the 3D biophysical model R-SWMS (Javaux et al., 2008). This model solves the Richards equation in 3D in the soil and the flow equation within the plant root xylem vessels. Furthermore, for solute transport simulations, the 3D particle tracker PARTRACE (Bechtold et al., 2011) was used. . We generated 3D virtual steady-state breakthrough curves (BTC) experiments in soils with transpiring plants. The averaged BTCs were then fitted with a 1D numerical flow model under steady-state conditions to obtain apparent CDE parameters. Two types of root architecture, a fibrous and a taprooted structure, were compared in virtual 3D experiments. The solute uptake type or the transpiration rate were also modified and we analyzed how these parameters affected apparent disperisivity and velocity profiles. Our simulation results show, that both, apparent velocity and dispersivity length are affected by water and solute root uptake. In addition, under high exclusion processes (slight or no active uptake), solute accumulates around roots and generates a long tailing to the breakthrough curves, which cannot be reproduced by 1D models that simulate root water uptake with solute exclusion. This observation may have an important impact on how to model pollutant mass transfer to groundwater at larger scales. Javaux, M., T. Schröder, J. Vanderborght, and H. Vereecken. 2008. Use of a three-dimensional detailed modeling approach for predicting root water uptake. Vadose Zone J. 7:1079-1088.doi: 10.2136/vzj2007.0115. Bechtold, M., S. Haber-Pohlmeier, J. Vanderborght, A. Pohlmeier, P.A. Ferre, and H. Vereecken. 2011. Near-surface solute redistribution during evaporation. Submitted to Geophys. Res. Lett

  19. Numerical Optimization Strategy for Determining 3D Flow Fields in Microfluidics

    NASA Astrophysics Data System (ADS)

    Eden, Alex; Sigurdson, Marin; Mezic, Igor; Meinhart, Carl

    2015-11-01

    We present a hybrid experimental-numerical method for generating 3D flow fields from 2D PIV experimental data. An optimization algorithm is applied to a theory-based simulation of an alternating current electrothermal (ACET) micromixer in conjunction with 2D PIV data to generate an improved representation of 3D steady state flow conditions. These results can be used to investigate mixing phenomena. Experimental conditions were simulated using COMSOL Multiphysics to solve the temperature and velocity fields, as well as the quasi-static electric fields. The governing equations were based on a theoretical model for ac electrothermal flows. A Nelder-Mead optimization algorithm was used to achieve a better fit by minimizing the error between 2D PIV experimental velocity data and numerical simulation results at the measurement plane. By applying this hybrid method, the normalized RMS velocity error between the simulation and experimental results was reduced by more than an order of magnitude. The optimization algorithm altered 3D fluid circulation patterns considerably, providing a more accurate representation of the 3D experimental flow field. This method can be generalized to a wide variety of flow problems. This research was supported by the Institute for Collaborative Biotechnologies through grant W911NF-09-0001 from the U.S. Army Research Office.

  20. Numerical Simulation of the Effect of 3D Needle Movement on Cavitation and Spray Formation in a Diesel Injector

    NASA Astrophysics Data System (ADS)

    Mandumpala Devassy, B.; Edelbauer, W.; Greif, D.

    2015-12-01

    Cavitation and its effect on spray formation and its dispersion play a crucial role in proper engine combustion and controlled emission. This study focuses on these effects in a typical common rail 6-hole diesel injector accounting for 3D needle movement and flow compressibility effects. Coupled numerical simulations using 1D and 3D CFD codes are used for this investigation. Previous studies in this direction have already presented a detailed structure of the adopted methodology. Compared to the previous analysis, the present study investigates the effect of 3D needle movement and cavitation on the spray formation for pilot and main injection events for a typical diesel engine operating point. The present setup performs a 3D compressible multiphase simulation coupled with a standalone 1D high pressure flow simulation. The simulation proceeds by the mutual communication between 1D and 3D solvers. In this work a typical common rail injector with a mini-sac nozzle is studied. The lateral and radial movement of the needle and its effect on the cavitation generation and the subsequent spray penetration are analyzed. The result indicates the effect of compressibility of the liquid on damping the needle forces, and also the difference in the spray penetration levels due to the asymmetrical flow field. Therefore, this work intends to provide an efficient and user-friendly engineering tool for simulating a complete fuel injector including spray propagation.

  1. Laser direct writing 3D structures for microfluidic channels: flow meter and mixer

    NASA Astrophysics Data System (ADS)

    Lin, Chih-Lang; Liu, Yi-Jui; Lin, Zheng-Da; Wu, Bo-Long; Lee, Yi-Hsiung; Shin, Chow-Shing; Baldeck, Patrice L.

    2015-03-01

    The 3D laser direct-writing technology is aimed at the modeling of arbitrary three-dimensional (3D) complex microstructures by scanning a laser-focusing point along predetermined trajectories. Through the perspective technique, the details of designed 3D structures can be properly fabricated in a microchannel. This study introduces a direct reading flow meter and a 3D passive mixer fabricated by laser direct writing for microfluidic applications. The flow meter consists of two rod-shaped springs, a pillar, an anchor, and a wedge-shaped indicator, installed inside a microfluidic channel. The indicator is deflected by the flowing fluid while restrained by the spring to establish an equilibrium indication according to the flow rate. The measurement is readily carried out by optical microscopy observation. The 3D passive Archimedes-screw-shaped mixer is designed to disturb the laminar flow 3D direction for enhancing the mixing efficiency. The simulation results indicate that the screw provides 3D disturbance of streamlines in the microchannel. The mixing demonstration for fluids flowing in the micrchannel approximately agrees with the simulation result. Thanks to the advantage of the laser direct writing technology, this study performs the ingenious applications of 3D structures for microchannels.

  2. Determination of the material fracture toughness by numerical analysis of 3D elastoplastic dynamic deformation

    NASA Astrophysics Data System (ADS)

    Bogdanov, V. R.; Sulim, G. T.

    2016-03-01

    We develop a technique for calculating the plastic strain and fracture toughness fields of a material by solving dynamical 3D problems of determining the stress-strain state in the elastoplastic statement with possible unloading of the material taken into account. The numerical solution was obtained by a finite difference scheme applied to the three-point shock bending tests of parallelepiped-shaped bars made of different materials with plane crack-notches in the middle. The fracture toughness coefficient was determined for reactor steel. The numerically calculated stress tensor components, mean stresses, the Odquist parameter characterizing the accumulated plastic strain, and the fracture toughness are illustrated by graphs.

  3. Failure Locus of 3D Four-Directional Braided Composites Under Biaxial Loading

    NASA Astrophysics Data System (ADS)

    Wang, Baolai; Fang, Guodong; Liang, Jun; Wang, Zhenqing

    2012-06-01

    The failure locus of 3D braided four-directional composites under complex loadings, such as tension-shear, compression-shear and tension-tension, can be obtained by micromechanical computation model. A finite element model of representative volume cell (RVC) of the braided composites, explicitly taking into account the braid yarn and matrix, is chosen to analyze the mechanical response. The failure mechanisms of the braided composites observed in experiment can be reproduced by the numerical computation in which the mesoscopic damage models of the braid yarn and matrix are developed. Several failure points of the braided composites under the biaxial loadings can be obtained when different stress ratios are imposed upon the RVC. In comparison with the Tsai-Wu and Tsai-Hahn criteria, the numerical failure loci of the braided composites except the tension-tension results are in good agreement with those results. It can be pointed out that the failure loci of the braided composites can be obtained by the numerical fitting of a large number of the failure points which are calculated by the numerical model.

  4. Fabrication of Conductive 3D Gold-Containing Microstructures via Direct Laser Writing.

    PubMed

    Blasco, Eva; Müller, Jonathan; Müller, Patrick; Trouillet, Vanessa; Schön, Markus; Scherer, Torsten; Barner-Kowollik, Christopher; Wegener, Martin

    2016-05-01

    3D conductive microstructures containing gold are fabricated by simultaneous photopolymerization and photoreduction via direct laser writing. The photoresist employed consists of water-soluble polymers and a gold precursor. The fabricated microstructures show good conductivity and are successfully employed for 3D connections between gold pads.

  5. Compressive Behavior of 3D Woven Composite Stiffened Panels: Experimental and Numerical Study

    NASA Astrophysics Data System (ADS)

    Zhou, Guangming; Pan, Ruqin; Li, Chao; Cai, Deng'an; Wang, Xiaopei

    2016-10-01

    The structural behavior and damage propagation of 3D woven composite stiffened panels with different woven patterns under axial-compression are here investigated. The panel is 2.5D interlock woven composites (2.5DIWC), while the straight-stiffeners are 3D woven orthogonal composites (3DWOC). They are coupled together with the Z-fibers from the stiffener passing straight thought the thickness of the panel. A "T-shape" model, in which the fiber bundle structure and resin matrix are drawn out to simulate the real situation of the connection area, is established to predict elastic constants and strength of the connection region. Based on Hashin failure criterion, a progressive damage model is carried out to simulate the compressive behavior of the stiffened panel. The 3D woven composite stiffened panels are manufactured using RTM process and then tested. A good agreement between experimental results and numerical predicted values for the compressive failure load is obtained. From initial damage to final collapse, the panel and stiffeners will not separate each other in the connection region. The main failure mode of 3D woven composite stiffened panels is compressive failure of fiber near the loading end corner.

  6. Symmetry-plane model of 3D Euler flows: Mapping to regular systems and numerical solutions of blowup

    NASA Astrophysics Data System (ADS)

    Mulungye, Rachel M.; Lucas, Dan; Bustamante, Miguel D.

    2014-11-01

    We introduce a family of 2D models describing the dynamics on the so-called symmetry plane of the full 3D Euler fluid equations. These models depend on a free real parameter and can be solved analytically. For selected representative values of the free parameter, we apply the method introduced in [M.D. Bustamante, Physica D: Nonlinear Phenom. 240, 1092 (2011)] to map the fluid equations bijectively to globally regular systems. By comparing the analytical solutions with the results of numerical simulations, we establish that the numerical simulations of the mapped regular systems are far more accurate than the numerical simulations of the original systems, at the same spatial resolution and CPU time. In particular, the numerical integrations of the mapped regular systems produce robust estimates for the growth exponent and singularity time of the main blowup quantity (vorticity stretching rate), converging well to the analytically-predicted values even beyond the time at which the flow becomes under-resolved (i.e. the reliability time). In contrast, direct numerical integrations of the original systems develop unstable oscillations near the reliability time. We discuss the reasons for this improvement in accuracy, and explain how to extend the analysis to the full 3D case. Supported under the programme for Research in Third Level Institutions (PRTLI) Cycle 5 and co-funded by the European Regional Development Fund.

  7. Numerical investigations on cavitation intensity for 3D homogeneous unsteady viscous flows

    NASA Astrophysics Data System (ADS)

    Leclercq, C.; Archer, A.; Fortes-Patella, R.

    2016-11-01

    The cavitation erosion remains an industrial issue. In this paper, we deal with the cavitation intensity which can be described as the aggressiveness - or erosive capacity - of a cavitating flow. The estimation of this intensity is a challenging problem both in terms of modelling the cavitating flow and predicting the erosion due to cavitation. For this purpose, a model was proposed to estimate cavitation intensity from 3D unsteady cavitating flow simulations. An intensity model based on pressure and void fraction derivatives was developped and applied to a NACA 65012 hydrofoil tested at LMH-EPFL (École Polytechnique Fédérale de Lausanne) [1]. 2D and 3D unsteady cavitating simulations were performed using a homogeneous model with void fraction transport equation included in Code_Saturne with cavitating module [2]. The article presents a description of the numerical code and the physical approach considered. Comparisons between 2D and 3D simulations, as well as between numerical and experimental results obtained by pitting tests, are analyzed in the paper.

  8. Assessment of inlet efficiency through a 3D simulation: numerical and experimental comparison.

    PubMed

    Gómez, Manuel; Recasens, Joan; Russo, Beniamino; Martínez-Gomariz, Eduardo

    2016-10-01

    Inlet efficiency is a requirement for characterizing the flow transfers between surface and sewer flow during rain events. The dual drainage approach is based on the joint analysis of both upper and lower drainage levels, and the flow transfer is one of the relevant elements to define properly this joint behaviour. This paper presents the results of an experimental and numerical investigation about the inlet efficiency definition. A full scale (1:1) test platform located in the Technical University of Catalonia (UPC) reproduces both the runoff process in streets and the water entering the inlet. Data from tests performed on this platform allow the inlet efficiency to be estimated as a function of significant hydraulic and geometrical parameters. A reproduction of these tests through a numerical three-dimensional code (Flow-3D) has been carried out simulating this type of flow by solving the RANS equations. The aim of the work was to reproduce the hydraulic performance of a previously tested grated inlet under several flow and geometric conditions using Flow-3D as a virtual laboratory. This will allow inlet efficiencies to be obtained without previous experimental tests. Moreover, the 3D model allows a better understanding of the hydraulics of the flow interception and the flow patterns approaching the inlet.

  9. A 3D numerical study of antimicrobial persistence in heterogeneous multi-species biofilms.

    PubMed

    Zhao, Jia; Shen, Ya; Haapasalo, Markus; Wang, Zhejun; Wang, Qi

    2016-03-07

    We develop a 3D hydrodynamic model to investigate the mechanism of antimicrobial persistence in a multi-species oral biofilm and its recovery after being treated by bisbiguanide chlorhexidine gluconate (CHX). In addition to the hydrodynamic transport in the spatially heterogeneous biofilm, the model also includes mechanisms of solvent-biomass interaction, bacterial phenotype conversion, and bacteria-drug interaction. A numerical solver for the model is developed using a second order numerical scheme in 3D space and time and implemented on GPUs for high-performance computing. The model is calibrated against a set of experimental data obtained using confocal laser scan microscopy (CLSM) on multi-species oral biofilms, where a quantitative agreement is reached. Our numerical results reveal that quorum sensing molecules and growth factors in this model are instrumental in biofilm formation and recovery after the antimicrobial treatment. In particular, we show that (i) young biofilms are more susceptible to the antimicrobial treatment than the mature ones, (ii) this phenomenon is strongly correlated with volume fractions of the persister and EPS in the biofilm being treated. This suggests that antimicrobial treatment should be best administered to biofilms earlier before they mature to produce a thick protective EPS layer. In addition, the numerical study also indicates that an antimicrobial effect can be achieved should a proper mechanism be devised to minimize the conversion of susceptible bacteria to persisters during and even after the treatment.

  10. Integrin associated proteins differentially regulate neutrophil polarity and directed migration in 2D and 3D.

    PubMed

    Yamahashi, Yukie; Cavnar, Peter J; Hind, Laurel E; Berthier, Erwin; Bennin, David A; Beebe, David; Huttenlocher, Anna

    2015-10-01

    Directed neutrophil migration in blood vessels and tissues is critical for proper immune function; however, the mechanisms that regulate three-dimensional neutrophil chemotaxis remain unclear. It has been shown that integrins are dispensable for interstitial three-dimensional (3D) leukocyte migration; however, the role of integrin regulatory proteins during directed neutrophil migration is not known. Using a novel microfluidic gradient generator amenable to 2D and 3D analysis, we found that the integrin regulatory proteins Kindlin-3, RIAM, and talin-1 differentially regulate neutrophil polarization and directed migration to gradients of chemoattractant in 2D versus 3D. Both talin-1-deficient and RIAM-deficient neutrophil-like cells had impaired adhesion, polarization, and migration on 2D surfaces whereas in 3D the cells polarized but had impaired 3D chemotactic velocity. Kindlin-3 deficient cells were able to polarize and migrate on 2D surfaces but had impaired directionality. In a 3D environment, Kindlin-3 deficient cells displayed efficient chemotaxis. These findings demonstrate that the role of integrin regulatory proteins in cell polarity and directed migration can be different in 2D and 3D.

  11. Large-scale 3D EM modeling with a Block Low-Rank multifrontal direct solver

    NASA Astrophysics Data System (ADS)

    Shantsev, Daniil V.; Jaysaval, Piyoosh; de la Kethulle de Ryhove, Sébastien; Amestoy, Patrick R.; Buttari, Alfredo; L'Excellent, Jean-Yves; Mary, Theo

    2017-03-01

    We put forward the idea of using a Block Low-Rank (BLR) multifrontal direct solver to efficiently solve the linear systems of equations arising from a finite-difference discretization of the frequency-domain Maxwell equations for 3D electromagnetic (EM) problems. The solver uses a low-rank representation for the off-diagonal blocks of the intermediate dense matrices arising in the multifrontal method to reduce the computational load. A numerical threshold, the so called BLR threshold, controlling the accuracy of low-rank representations was optimized by balancing errors in the computed EM fields against savings in floating point operations (flops). Simulations were carried out over large-scale 3D resistivity models representing typical scenarios for marine controlled-source EM surveys, and in particular the SEG SEAM model which contains an irregular salt body. The flop count, size of factor matrices and elapsed run time for matrix factorization are reduced dramatically by using BLR representations and can go down to, respectively, 10%, 30% and 40% of their full rank values for our largest system with N = 20.6 million unknowns. The reductions are almost independent of the number of MPI tasks and threads at least up to 90 × 10 = 900 cores. The BLR savings increase for larger systems, which reduces the factorization flop complexity from O( {{N^2}} ) for the full-rank solver to O( {{N^m}} ) with m = 1.4 - 1.6 . The BLR savings are significantly larger for deep-water environments that exclude the highly resistive air layer from the computational domain. A study in a scenario where simulations are required at multiple source locations shows that the BLR solver can become competitive in comparison to iterative solvers as an engine for 3D CSEM Gauss-Newton inversion that requires forward modelling for a few thousand right-hand sides.

  12. The Vajont disaster: a 3D numerical simulation for the slide and the waves

    NASA Astrophysics Data System (ADS)

    Rubino, Angelo; Androsov, Alexey; Vacondio, Renato; Zanchettin, Davide; Voltzinger, Naum

    2016-04-01

    A very high resolution O(5 m), 3D hydrostatic nonlinear numerical model was used to simulate the dynamics of both the slide and the surface waves produced during the Vajont disaster (north Italy, 1963), one of the major landslide-induced tsunamis ever documented. Different simulated wave phenomena like, e.g., maximum run-up on the opposite shore, maximum height, and water velocity were analyzed and compared with data available in literature, including the results of a fully 3D simulation obtained with a Smoothed Particle Hydrodynamic code. The difference between measured and simulated after-slide bathymetries was calculated and used in an attempt to quantify the relative magnitude and extension of rigid and fluid motion components during the event.

  13. The 3D modeling of high numerical aperture imaging in thin films

    NASA Technical Reports Server (NTRS)

    Flagello, D. G.; Milster, Tom

    1992-01-01

    A modelling technique is described which is used to explore three dimensional (3D) image irradiance distributions formed by high numerical aperture (NA is greater than 0.5) lenses in homogeneous, linear films. This work uses a 3D modelling approach that is based on a plane-wave decomposition in the exit pupil. Each plane wave component is weighted by factors due to polarization, aberration, and input amplitude and phase terms. This is combined with a modified thin-film matrix technique to derive the total field amplitude at each point in a film by a coherent vector sum over all plane waves. Then the total irradiance is calculated. The model is used to show how asymmetries present in the polarized image change with the influence of a thin film through varying degrees of focus.

  14. Understanding heavy mineral enrichment – Using a 3D numerical model

    NASA Astrophysics Data System (ADS)

    Bartzke, Gerhard; Schmeeckle, Mark; Huhn, Katrin

    2015-04-01

    Layered deposits of light and heavy minerals can be found in many aquatic environments. Various researchers attempted to understand the role of the enrichment process of heavy minerals in placers using flume or in situ field experiments, because of their high economic value. However, a precise quantification of the physical processes occurring at the direct vicinity and in the interior of layered deposits is often limited with such techniques. To investigate the physical processes causing heavy particle enrichment in layers at the direct vicinity and in the interior of sediment beds, a 3D numerical model as an alternative to in situ measurement was used. The 3D model simulates particle transport in water by combining a turbulence-resolving large eddy simulation (LES) with a discrete element model (DEM) prescribing the motion of individual grains. The dimensions of model domain where X = 0.12 [m], Y = 0.06 [m], and Z = 0.04 [m]. A pressure gradient and cyclic boundaries at the side walls allowed the simulation of a recycling flow. For the generation of a granular bed 0.004 [m] in height 200,000 spherical particles (D50 = 500 µm) were generated randomly and deposited under gravity at the bottom of the domain. Seven suites of experiments were designed in which the concentration of heavy i.e. 5000 [kg/m³] over light particles i.e. 2560 [kg/m³] was increased ranging from 0%, 10%, 25%, 50%, 75%, 90%, to 100% heavy particle content. All beds where tested for five seconds at a predefined flow speed of 0.35 [m/s]. The model results showed that at the direct vicinity of the bed the presence of high-vorticity turbulence structures embedded within broader high speed fluid regions caused the formation of particle sweeps or high-speed wedges. The vertical extension of the sweeps decreased when a higher amount of heavy particles was mixed to the beds, which ultimately resulted in a decrease of the bed roughness. Further, the particle flux decreased when higher quantities of

  15. Numerical and experimental study of gas flows in 2D and 3D microchannels

    NASA Astrophysics Data System (ADS)

    Guo, Xiaohui; Huang, Chihyung; Alexeenko, Alina; Sullivan, John

    2008-02-01

    In the experiments conducted at Purdue, the air flow in rectangular cross-section microchannels was investigated using pressure sensitive paint. The high resolution pressure measurements were obtained for inlet-to-outlet pressure ratios from 1.76 to 20 with the outlet Knudsen numbers in the range from 0.003 to 0.4 based on the hydraulic diameter of 151.7 µm and the length-to-height ratio of about 50. In the slip flow regime, the air flow was simulated by the 2D and 3D Navier-Stokes equations with no-slip and slip boundary conditions. For various pressure ratios, the entrance flow development, compressibility and rarefaction effects were observed in both experiments and numerical simulations. It was found that the accurate modeling of gas flows in finite-length channels requires the inlet and outlet reservoirs to be included in computations. Effects of entrance geometry on the friction factor were studied for 3D cases. In both experiments and numerical modeling, significant pressure drop was found starting at the inlet chamber. The numerical modeling also predicted an apparent temperature drop at the channel exit.

  16. Numerical and experimental investigation of the 3D free surface flow in a model Pelton turbine

    NASA Astrophysics Data System (ADS)

    Fiereder, R.; Riemann, S.; Schilling, R.

    2010-08-01

    This investigation focuses on the numerical and experimental analysis of the 3D free surface flow in a Pelton turbine. In particular, two typical flow conditions occurring in a full scale Pelton turbine - a configuration with a straight inlet as well as a configuration with a 90 degree elbow upstream of the nozzle - are considered. Thereby, the effect of secondary flow due to the 90 degree bending of the upstream pipe on the characteristics of the jet is explored. The hybrid flow field consists of pure liquid flow within the conduit and free surface two component flow of the liquid jet emerging out of the nozzle into air. The numerical results are validated against experimental investigations performed in the laboratory of the Institute of Fluid Mechanics (FLM). For the numerical simulation of the flow the in-house unstructured fully parallelized finite volume solver solver3D is utilized. An advanced interface capturing model based on the classic Volume of Fluid method is applied. In order to ensure sharp interface resolution an additional convection term is added to the transport equation of the volume fraction. A collocated variable arrangement is used and the set of non-linear equations, containing fluid conservation equations and model equations for turbulence and volume fraction, are solved in a segregated manner. For pressure-velocity coupling the SIMPLE and PISO algorithms are implemented. Detailed analysis of the observed flow patterns in the jet and of the jet geometry are presented.

  17. Experimental and Numerical Investigation of Forging Process to Reproduce a 3D Aluminium Foam Complex Shape

    SciTech Connect

    Filice, Luigino; Gagliardi, Francesco; Umbrello, Domenico; Shivpuri, Rajiv

    2007-05-17

    Metallic foams represent one of the most exciting materials introduced in the manufacturing scenario in the last years. In the study here addressed, the experimental and numerical investigations on the forging process of a simple foam billet shaped into complex sculptured parts were carried out. In particular, the deformation behavior of metallic foams and the development of density gradients were investigated through a series of experimental forging tests in order to produce a selected portion of a hip prosthesis. The human bone replacement was chosen as case study due to its industrial demand and for its particular 3D complex shape. A finite element code (Deform 3D) was utilized for modeling the foam behavior during the forging process and an accurate material rheology description was used based on a porous material model which includes the measured local density. Once the effectiveness of the utilized Finite Element model was verified through the comparison with the experimental evidences, a numerical study of the influence of the foam density was investigated. The obtained numerical results shown as the initial billet density plays an important role on the prediction of the final shape, the optimization of the flash as well as the estimation of the punch load.

  18. Numerical simulation of the 3D unsteady turbulent flow in a combustion chamber

    NASA Astrophysics Data System (ADS)

    Stuparu, Adrian; Holotescu, Sorin

    2011-06-01

    The influence of turbulence models on the 3D unsteady flow in a combustion chamber with a central bluff body is analyzed. Three different turbulence models are used (realizable k-ɛ, Reynolds Stress Model and Large Eddy Simulation) and a comparison is made on the evolution of the velocity field over time. The numerical simulation of the gas flow in the combustion chamber was performed using FLUENT 6.3 software and the computational geometry, consisting of a structured mesh with 810,000 cells, was built using the pre-processor GAMBIT 2.4. The extent of the recirculation region behind the bluff body was determined for each turbulence model.

  19. Numerical simulation of the 3D unsteady turbulent flow in a combustion chamber

    NASA Astrophysics Data System (ADS)

    Stuparu, Adrian; Holotescu, Sorin

    2011-06-01

    The influence of turbulence models on the 3D unsteady flow in a combustion chamber with a central bluff body is analyzed. Three different turbulence models are used ( realizable k-ɛ, Reynolds Stress Model and Large Eddy Simulation) and a comparison is made on the evolution of the velocity field over time. The numerical simulation of the gas flow in the combustion chamber was performed using FLUENT 6.3 software and the computational geometry, consisting of a structured mesh with 810,000 cells, was built using the pre-processor GAMBIT 2.4. The extent of the recirculation region behind the bluff body was determined for each turbulence model.

  20. Numerical investigation of band gaps in 3D printed cantilever-in-mass metamaterials

    NASA Astrophysics Data System (ADS)

    Qureshi, Awais; Li, Bing; Tan, K. T.

    2016-06-01

    In this research, the negative effective mass behavior of elastic/mechanical metamaterials is exhibited by a cantilever-in-mass structure as a proposed design for creating frequency stopping band gaps, based on local resonance of the internal structure. The mass-in-mass unit cell model is transformed into a cantilever-in-mass model using the Bernoulli-Euler beam theory. An analytical model of the cantilever-in-mass structure is derived and the effects of geometrical dimensions and material parameters to create frequency band gaps are examined. A two-dimensional finite element model is created to validate the analytical results, and excellent agreement is achieved. The analytical model establishes an easily tunable metamaterial design to realize wave attenuation based on locally resonant frequency. To demonstrate feasibility for 3D printing, the analytical model is employed to design and fabricate 3D printable mechanical metamaterial. A three-dimensional numerical experiment is performed using COMSOL Multiphysics to validate the wave attenuation performance. Results show that the cantilever-in-mass metamaterial is capable of mitigating stress waves at the desired resonance frequency. Our study successfully presents the use of one constituent material to create a 3D printed cantilever-in-mass metamaterial with negative effective mass density for stress wave mitigation purposes.

  1. Volatile transport on inhomogeneous surfaces: II. Numerical calculations (VT3D)

    NASA Astrophysics Data System (ADS)

    Young, Leslie A.

    2017-03-01

    Several distant icy worlds have atmospheres that are in vapor-pressure equilibrium with their surface volatiles, including Pluto, Triton, and, probably, several large KBOs near perihelion. Studies of the volatile and thermal evolution of these have been limited by computational speed, especially for models that treat surfaces that vary with both latitude and longitude. In order to expedite such work, I present a new numerical model for the seasonal behavior of Pluto and Triton which (i) uses initial conditions that improve convergence, (ii) uses an expedient method for handling the transition between global and non-global atmospheres, (iii) includes local conservation of energy and global conservation of mass to partition energy between heating, conduction, and sublimation or condensation, (iv) uses time-stepping algorithms that ensure stability while allowing larger timesteps, and (v) can include longitudinal variability. This model, called VT3D, has been used in Young (2012a, 2012b), Young (2013), Olkin et al. (2015), Young and McKinnon (2013), and French et al. (2015). Many elements of VT3D can be used independently. For example, VT3D can also be used to speed up thermophysical models (Spencer et al., 1989) for bodies without volatiles. Code implementation is included in the supplemental materials and is available from the author.

  2. Numerical investigation of band gaps in 3D printed cantilever-in-mass metamaterials

    PubMed Central

    Qureshi, Awais; Li, Bing; Tan, K. T.

    2016-01-01

    In this research, the negative effective mass behavior of elastic/mechanical metamaterials is exhibited by a cantilever-in-mass structure as a proposed design for creating frequency stopping band gaps, based on local resonance of the internal structure. The mass-in-mass unit cell model is transformed into a cantilever-in-mass model using the Bernoulli-Euler beam theory. An analytical model of the cantilever-in-mass structure is derived and the effects of geometrical dimensions and material parameters to create frequency band gaps are examined. A two-dimensional finite element model is created to validate the analytical results, and excellent agreement is achieved. The analytical model establishes an easily tunable metamaterial design to realize wave attenuation based on locally resonant frequency. To demonstrate feasibility for 3D printing, the analytical model is employed to design and fabricate 3D printable mechanical metamaterial. A three-dimensional numerical experiment is performed using COMSOL Multiphysics to validate the wave attenuation performance. Results show that the cantilever-in-mass metamaterial is capable of mitigating stress waves at the desired resonance frequency. Our study successfully presents the use of one constituent material to create a 3D printed cantilever-in-mass metamaterial with negative effective mass density for stress wave mitigation purposes. PMID:27329828

  3. Designing stream restoration structures using 3D hydro-morphodynamic numerical modeling

    NASA Astrophysics Data System (ADS)

    Khosronejad, A.; Kozarek, J. L.; Hill, C.; Kang, S.; Plott, R.; Diplas, P.; Sotiropoulos, F.

    2012-12-01

    Efforts to stabilize and restore streams and rivers across the nation have grown dramatically in the last fifteen years, with over $1 billion spent every year since 1990. The development of effective and long-lasting strategies, however, is far from trivial and despite large investments it is estimated that at least 50% of stream restoration projects fail. This is because stream restoration is today more of an art than a science. The lack of physics-based engineering standards for stream restoration techniques is best underscored in the design and installation of shallow, in-stream, low-flow structures, which direct flow away from the banks, protect stream banks from erosion and scour, and increase habitat diversity. Present-day design guidelines for such in-stream structures are typically vague and rely heavily on empirical knowledge and intuition rather than physical understanding of the interactions of the structures the flow and sediment transport processes in the waterway. We have developed a novel computer-simulation based paradigm for designing in stream structures that is based on state-of-the-art 3D hydro-morphodynamic modeling validated with laboratory and field-scale experiments. The numerical model is based on the Curvilinear Immersed Boundary (CURVIB) approach of Kang et al. and Khosronejad et al. (Adv. in Water Res. 2010, 2011), which can simulate flow and sediment transport processes in arbitrarily complex waterways with embedded rock structures. URANS or large-eddy simulation (LES) models are used to simulate turbulence. Transport of bed materials is simulated using the non-equilibrium Exner equation for the bed surface elevation coupled with a transport equation for suspended load. Extensive laboratory and field-scale experiments have been carried out and employed to validate extensively the computational model. The numerical model is used to develop a virtual testing environment within which one or multiple in-stream structures can be embedded in

  4. Towards more realistic 2D & 3D numerical models of Earth's mantle

    NASA Astrophysics Data System (ADS)

    Ghias, Sanaz

    2011-12-01

    There are a number of simplifying assumptions in modeling Earth's deep interior. These are mostly simplifying assumptions that make the mathematics simpler either for less complicated modeling or for numerical efficiency purposes. The aim of this study is to investigate the effects of some of these simplifying assumptions on 2D and 3D mantle convection models. In particular, the cases with variable coefficients of thermal expansion, alpha, and the inclusion of mineral phase transitions and viscosity stratification have been studied. The coefficient of thermal expansion is temperature- and depth-dependent in Earth. But for simplicity, it has been considered as constant in most mantle convection models and only depth-dependent in others. 2D mantle convection models (2D Cartesian and 2D cylindrical) have been created based on an existing model from Jarvis [1992] to investigate the effects of temperature- and depth-dependent alpha on mantle convection compared with the simplified cases. Also an existing version of a 3D parallel mantle convection model, MC3D, from Lowman et al. [2001] have been modified to include the temperature- and depth-dependent alpha. In the 3D study it has also been investigated that how the effects of temperature- and depth-dependent alpha vary with or without lithospheric plates. There are at least two mineral phase transitions in Earth. There is an exothermic phase boundary at 410km below the surface and an endothermic phase boundary at 660km below the surface. For simplicity, most mantle convection models do not consider any of the phase boundaries. Some consider only the endothermic phase boundary. A 2D cylindrical model from Shahnas and Jarvas [2005] has been employed to investigate the effects of considering both phase boundaries compared to models with either no, or one, phase boundary. Different viscosity stratifications have been used in addition to the phase boundaries.

  5. 3D Numerical Simulation on the Sloshing Waves Excited by the Seismic Shacking

    NASA Astrophysics Data System (ADS)

    Zhang, Lin; Wu, Tso-Ren

    2016-04-01

    In the event of 2015 Nepal earthquake, a video clip broadcasted worldwide showed a violent water spilling in a hotel swimming pool. This sloshing phenomenon indicates a potential water loss in the sensitive facilities, e.g. the spent fuel pools in nuclear power plant, has to be taken into account carefully under the consideration of seismic-induced ground acceleration. In the previous studies, the simulation of sloshing mainly focused on the pressure force on the structure by using a simplified Spring-Mass Method developed in the field of solid mechanics. However, restricted by the assumptions of plane water surface and limited wave height, significant error will be made in evaluating the amount of water loss in the tank. In this paper, the computational fluid dynamical model, Splash3D, was adopted for studying the sloshing problem accurately. Splash3D solved 3D Navier-Stokes Equation directly with Large-Eddy Simulation (LES) turbulent closure. The Volume-of-fluid (VOF) method with piecewise linear interface calculation (PLIC) was used to track the complex breaking water surface. The time series acceleration of a design seismic was loaded to excite the water. With few restrictions from the assumptions, the accuracy of the simulation results were improved dramatically. A series model validations were conducted by compared to a 2D theoretical solution, and a 3D experimental data. Good comparisons can be seen. After the validation, we performed the simulation for considering a sloshing case in a rectangular water tank with a dimension of 12 m long, 8 m wide, 8 m deep, which contained water with 7 m in depth. The seismic movement was imported by considering time-series acceleration in three dimensions, which were about 0.5 g to 1.2 g in the horizontal directions, and 0.3 g to 1 g in the vertical direction. We focused the discussions on the kinematics of the water surface, wave breaking, velocity field, pressure field, water force on the side walls, and, most

  6. Parareal in time 3D numerical solver for the LWR Benchmark neutron diffusion transient model

    SciTech Connect

    Baudron, Anne-Marie; Riahi, Mohamed Kamel; Salomon, Julien

    2014-12-15

    In this paper we present a time-parallel algorithm for the 3D neutrons calculation of a transient model in a nuclear reactor core. The neutrons calculation consists in numerically solving the time dependent diffusion approximation equation, which is a simplified transport equation. The numerical resolution is done with finite elements method based on a tetrahedral meshing of the computational domain, representing the reactor core, and time discretization is achieved using a θ-scheme. The transient model presents moving control rods during the time of the reaction. Therefore, cross-sections (piecewise constants) are taken into account by interpolations with respect to the velocity of the control rods. The parallelism across the time is achieved by an adequate use of the parareal in time algorithm to the handled problem. This parallel method is a predictor corrector scheme that iteratively combines the use of two kinds of numerical propagators, one coarse and one fine. Our method is made efficient by means of a coarse solver defined with large time step and fixed position control rods model, while the fine propagator is assumed to be a high order numerical approximation of the full model. The parallel implementation of our method provides a good scalability of the algorithm. Numerical results show the efficiency of the parareal method on large light water reactor transient model corresponding to the Langenbuch–Maurer–Werner benchmark.

  7. ProteinVista: a fast molecular visualization system using Microsoft Direct3D.

    PubMed

    Park, Chan-Yong; Park, Sung-Hee; Park, Soo-Jun; Park, Sun-Hee; Hwang, Chi-Jung

    2008-09-01

    Many tools have been developed to visualize protein and molecular structures. Most high quality protein visualization tools use the OpenGL graphics library as a 3D graphics system. Currently, the performance of recent 3D graphics hardware has rapidly improved. Recent high-performance 3D graphics hardware support Microsoft Direct3D graphics library more than OpenGL and have become very popular in personal computers (PCs). In this paper, a molecular visualization system termed ProteinVista is proposed. ProteinVista is well-designed visualization system using the Microsoft Direct3D graphics library. It provides various visualization styles such as the wireframe, stick, ball and stick, space fill, ribbon, and surface model styles, in addition to display options for 3D visualization. As ProteinVista is optimized for recent 3D graphics hardware platforms and because it uses a geometry instancing technique, its rendering speed is 2.7 times faster compared to other visualization tools.

  8. 3-D numerical simulations of eruption clouds: Effects of the environmental wind on the turbulent mixing

    NASA Astrophysics Data System (ADS)

    Suzuki, Y. J.; Koyaguchi, T.

    2011-12-01

    During an explosive volcanic eruption, a mixture of volcanic gas and solid pyroclasts are ejected from a volcanic vent with a high temperature. As it rises, the mixture entrains ambient air owing to turbulent mixing. The entrained air expands by heating from the hot pyroclasts, and the eruption cloud (i.e., the ejected material plus the entrained air) rises as a buoyant plume. Because the plume height is principally determined by the balance between the thermal energy ejected at the vent and the work done in transporting the ejected material plus entrained air through the atmospheric stratification, it is controlled by the efficiency of turbulent mixing; as the amount of entrained air increases, the plume height decreases. In the 1-D models of eruption column (e.g., Woods, 1988), the plume height is calculated on the assumption that the mean inflow velocity across the edge of turbulent jet and/or plume is proportional to the mean vertical velocity (Morton et al., 1956). Experimental studies suggest that the proportionality constant (i.e., entrainment coefficient, k), which represents the efficiency of turbulent mixing, is about 0.10 for pure plumes when there is no wind. When an environmental wind is present, however, the interaction between a buoyant plume and the wind may enhance the entrainment of air and can significantly decrease the plume height (Bursik, 2001). In order to investigate the effects of wind on the vortical structures and the efficiency of turbulent mixing in an eruption cloud, we have carried out 3-D numerical simulations of eruption column which is ejected in a wind field. The simulation results indicate that a buoyant plume vertically rises as a "strong plume" (e.g., Bonadonna et al., 2003) when the wind velocity is low: the cloud reaches the neutral buoyancy level and overshoots until the upward momentum is exhausted. In this case, the plume height is consistent with prediction by the 1-D model with k~0.10. When the wind velocity is high, on

  9. Concentrated hydroxyapatite inks for direct-write assembly of 3-D periodic scaffolds.

    PubMed

    Michna, Sarah; Wu, Willie; Lewis, Jennifer A

    2005-10-01

    Hydroxyapatite (HA) scaffolds with a 3-D periodic architecture and multiscale porosity have been fabricated by direct-write assembly. Concentrated HA inks with tailored viscoelastic properties were developed to enable the construction of complex 3-D architectures comprised of self-supporting cylindrical rods in a layer-by-layer patterning sequence. By controlling their lattice constant and sintering conditions, 3-D periodic HA scaffolds were produced with a bimodal pore size distribution. Mercury intrusion porosimetry (MIP) was used to determine the characteristic pore size and volume associated with the interconnected pore channels between HA rods and the finer pores within the partially sintered HA rods.

  10. Implementation of a 3d numerical model of a folded multilayer carbonate aquifer

    NASA Astrophysics Data System (ADS)

    Di Salvo, Cristina; Guyennon, Nicolas; Romano, Emanuele; Bruna Petrangeli, Anna; Preziosi, Elisabetta

    2016-04-01

    The main objective of this research is to present a case study of the numerical model implementation of a complex carbonate, structurally folded aquifer, with a finite difference, porous equivalent model. The case study aquifer (which extends over 235 km2 in the Apennine chain, Central Italy) provides a long term average of 3.5 m3/s of good quality groundwater to the surface river network, sustaining the minimum vital flow, and it is planned to be exploited in the next years for public water supply. In the downstream part of the river in the study area, a "Site of Community Importance" include the Nera River for its valuable aquatic fauna. However, the possible negative effects of the foreseen exploitation on groundwater dependent ecosystems are a great concern and model grounded scenarios are needed. This multilayer aquifer was conceptualized as five hydrostratigraphic units: three main aquifers (the uppermost unconfined, the central and the deepest partly confined), are separated by two locally discontinuous aquitards. The Nera river cuts through the two upper aquifers and acts as the main natural sink for groundwater. An equivalent porous medium approach was chosen. The complex tectonic structure of the aquifer requires several steps in defining the conceptual model; the presence of strongly dipping layers with very heterogeneous hydraulic conductivity, results in different thicknesses of saturated portions. Aquifers can have both unconfined or confined zones; drying and rewetting must be allowed when considering recharge/discharge cycles. All these characteristics can be included in the conceptual and numerical model; however, being the number of flow and head target scarce, the over-parametrization of the model must be avoided. Following the principle of parsimony, three steady state numerical models were developed, starting from a simple model, and then adding complexity: 2D (single layer), QUASI -3D (with leackage term simulating flow through aquitards) and

  11. A Numerical Study on the Thermal Conductivity of 3D Woven C/C Composites at High Temperature

    NASA Astrophysics Data System (ADS)

    Shigang, Ai; Rujie, He; Yongmao, Pei

    2015-12-01

    Experimental data for Carbon/Carbon (C/C) constituent materials are combined with a three dimensional steady state heat transfer finite element analysis to demonstrate the average in-plane and out-of-plane thermal conductivities (TCs) of C/C composites. The finite element analysis is carried out at two distinct length scales: (a) a micro scale comparable with the diameter of carbon fibres and (b) a meso scale comparable with the carbon fibre yarns. Micro-scale model calculate the TCs at the fibre yarn scale in the three orthogonal directions ( x, y and z). The output results from the micro-scale model are then incorporated in the meso-scale model to obtain the global TCs of the 3D C/C composite. The simulation results are quite consistent with the theoretical and experimental counterparts reported in references. Based on the numerical approach, TCs of the 3D C/C composite are calculated from 300 to 2500 K. Particular attention is given in elucidating the variations of the TCs with temperature. The multi-scale models provide an efficient approach to predict the TCs of 3D textile materials, which is helpful for the thermodynamic property analysis and structure design of the C/C composites.

  12. 3D Numerical Study of the Shear Rheology of a Semi-dilute Viscoelastic Suspension

    NASA Astrophysics Data System (ADS)

    Yang, Mengfei; Krishnan, Sreenath; Shaqfeh, Eric

    2016-11-01

    The stress in suspensions of rigid particles in polymer solutions is of considerable interest in applications such as manufacturing processes and fracturing technologies. Deriving an analytic expression for the material functions of a viscoelastic suspension under shear is difficult due to the nonlinear particle-fluid and particle-particle interactions, and theoretical studies have been limited to dilute suspensions at low shear Weissenberg number (Wi) or low polymer concentrations. Previously, we performed 3D single-particle simulations and showed that the results agreed well with the existing theories in the appropriate parameter regimes. We found that suspensions in constant-viscosity elastic fluids shear-thicken over a range of Wi and their material properties plateau at higher Wi. However, discrepancies between simulation and existing experimental measurements for volume fractions as low as 2.5% suggested that interparticle hydrodynamic interactions could not be neglected. We now present 3D high fidelity numerical simulations of multiple spheres freely suspended in a sheared viscoelastic fluid using an immersed boundary framework to study the relationship between hydrodynamic interactions, particle structure formation, and the bulk rheology of viscoelastic suspensions. We observe that in a non-shear thinning elastic fluid, particles do not "chain", but their interactions induce additional polymer stresses in the fluid which contribute to a stronger particle effect than predicted in the dilute limit.

  13. Early Earth plume-lid tectonics: A high-resolution 3D numerical modelling approach

    NASA Astrophysics Data System (ADS)

    Fischer, R.; Gerya, T.

    2016-10-01

    Geological-geochemical evidence point towards higher mantle potential temperature and a different type of tectonics (global plume-lid tectonics) in the early Earth (>3.2 Ga) compared to the present day (global plate tectonics). In order to investigate tectono-magmatic processes associated with plume-lid tectonics and crustal growth under hotter mantle temperature conditions, we conduct a series of 3D high-resolution magmatic-thermomechanical models with the finite-difference code I3ELVIS. No external plate tectonic forces are applied to isolate 3D effects of various plume-lithosphere and crust-mantle interactions. Results of the numerical experiments show two distinct phases in coupled crust-mantle evolution: (1) a longer (80-100 Myr) and relatively quiet 'growth phase' which is marked by growth of crust and lithosphere, followed by (2) a short (∼20 Myr) and catastrophic 'removal phase', where unstable parts of the crust and mantle lithosphere are removed by eclogitic dripping and later delamination. This modelling suggests that the early Earth plume-lid tectonic regime followed a pattern of episodic growth and removal also called episodic overturn with a periodicity of ∼100 Myr.

  14. 3D numerical simulation of the evolutionary process of aeolian downsized crescent-shaped dunes

    NASA Astrophysics Data System (ADS)

    Zhou, Xiaosi; Zhang, Yang; Wang, Yuan; Li, Min

    2016-06-01

    A dune constitutive model was coupled with a large eddy simulation (LES) with the Smagorinsky subgrid-scale (SGS) model to accurately describe the evolutionary process of dunes from the macroscopic perspective of morphological dynamics. A 3D numerical simulation of the evolution of aeolian downsized crescent-shaped dunes was then performed. The evolution of the 3D structure of Gaussian-shaped dunes was simulated under the influence of gravity modulation, which was the same with the vertical oscillation of the sand bed to adjust the threshold of sand grain liftoff in wind tunnel experiments under the same wind speed. The influence of gravity modulation intensity on the characteristic scale parameter of the dune was discussed. Results indicated that the crescent shape of the dune was reproduced with the action of gravity during regulation of the saturation of wind-sand flow at specific times. The crescent shape was not dynamically maintained as time passed, and the dunes dwindled until they reached final decomposition because of wind erosion. The height of the dunes decreased over time, and the height-time curve converged as the intensity of modulation increased linearly. The results qualitatively agreed with those obtained from wind tunnel experiments.

  15. Experimental and Numerical Investigation of Forging Process to Reproduce a 3D Aluminium Foam Complex Shape

    NASA Astrophysics Data System (ADS)

    Filice, Luigino; Gagliardi, Francesco; Shivpuri, Rajiv; Umbrello, Domenico

    2007-05-01

    Metallic foams represent one of the most exciting materials introduced in the manufacturing scenario in the last years. In the study here addressed, the experimental and numerical investigations on the forging process of a simple foam billet shaped into complex sculptured parts were carried out. In particular, the deformation behavior of metallic foams and the development of density gradients were investigated through a series of experimental forging tests in order to produce a selected portion of a hip prosthesis. The human bone replacement was chosen as case study due to its industrial demand and for its particular 3D complex shape. A finite element code (Deform 3D®) was utilized for modeling the foam behavior during the forging process and an accurate material rheology description was used based on a porous material model which includes the measured local density. Once the effectiveness of the utilized Finite Element model was verified through the comparison with the experimental evidences, a numerical study of the influence of the foam density was investigated. The obtained numerical results shown as the initial billet density plays an important role on the prediction of the final shape, the optimization of the flash as well as the estimation of the punch load.

  16. 3D numerical investigation on landslide generated tsunamis around a conical island

    NASA Astrophysics Data System (ADS)

    Montagna, Francesca; Bellotti, Giorgio

    2010-05-01

    This paper presents numerical computations of tsunamis generated by subaerial and submerged landslides falling along the flank of a conical island. The study is inspired by the tsunamis that on 30th December 2002 attacked the coast of the volcanic island of Stromboli (South Tyrrhenian sea, Italy). In particular this paper analyzes the important feature of the lateral spreading of landside generated tsunamis and the associated flooding hazard. The numerical model used in this study is the full three dimensional commercial code FLOW-3D. The model has already been successfully used (Choi et al., 2007; 2008; Chopakatla et al, 2008) to study the interaction of waves and structures. In the simulations carried out in this work a particular feature of the code has been employed: the GMO (General Moving Object) algorithm. It allows to reproduce the interaction between moving objects, as a landslide, and the water. FLOW-3D has been firstly validated using available 3D experiments reproducing tsunamis generated by landslides at the flank of a conical island. The experiments have been carried out in the LIC laboratory of the Polytechnic of Bari, Italy (Di Risio et al., 2009). Numerical and experimental time series of run-up and sea level recorded at gauges located at the flanks of the island and offshore have been successfully compared. This analysis shows that the model can accurately represent the generation, the propagation and the inundation of landslide generated tsunamis and suggests the use of the numerical model as a tool for preparing inundation maps. At the conference we will present the validation of the model and parametric analyses aimed to investigate how wave properties depend on the landslide kinematic and on further parameters such as the landslide volume and shape, as well as the radius of the island. The expected final results of the research are precomputed inundation maps that depend on the characteristics of the landslide and of the island. Finally we

  17. Slab detachment in laterally varying subduction zones: 3-D numerical modeling

    NASA Astrophysics Data System (ADS)

    Duretz, T.; Gerya, T. V.; Spakman, W.

    2014-03-01

    Understanding the three-dimensional (3-D) dynamics of subduction-collision systems is a longstanding challenge in geodynamics. We investigate the impact of slab detachment in collision systems that are subjected to along-trench variations. High-resolution thermomechanical numerical models, encompassing experimentally derived flow laws and a pseudo free surface, are employed to unravel lithospheric and topographic evolutions. First, we consider coeval subduction of adjacent continental and oceanic lithospheres (SCO). This configuration yields to two-stage slab detachment during collision, topographic buildup and extrusion, variable along-trench convergence rates, and associated trench deformation. The second setting considers a convergent margin, which is laterally limited by a transform boundary (STB). Such collisional system is affected by a single slab detachment, little trench deformation, and moderately confined upper plate topography. The effect of initial thermal slab age on SCO and STB models are explored. Similarities with natural analogs along the Arabia-Eurasia collision are discussed.

  18. Numerical simulation of pulsation processes in hydraulic turbine based on 3D model of cavitating flow

    NASA Astrophysics Data System (ADS)

    Panov, L. V.; Chirkov, D. V.; Cherny, S. G.; Pylev, I. M.

    2014-01-01

    A new approach was proposed for simulation of unsteady cavitating flow in the flow passage of a hydraulic power plant. 1D hydro-acoustics equations are solved in the penstock domain. 3D equations of turbulent flow of isothermal compressible liquid-vapor mixture are solved in the turbine domain. Cavitation is described by a transfer equation for liquid phase with a source term which is responsible for evaporation and condensation. The developed method was applied for simulation of pulsations in pressure, discharge, and total energy propagating along the flow conduit of the hydraulic power plant. Simulation results are in qualitative and quantitative agreement with experiment. The influence of key physical and numerical parameters like discharge, cavitation number, penstock length, time step, and vapor density on simulation results was studied.

  19. An experimental and numerical study of 3-D braided structural textile composites

    SciTech Connect

    Abusafieh, A.; Kalidindi, S.R.; Franco, E.

    1994-12-31

    It has been reported in literature that isostrain models (also known as Fabric Geometry Models) provide good predictions of the elastic moduli of three-dimensional textile composites. This study reports a critical evaluation of the accuracy of the isostrain models by comparing the predictions against experimental measurements as well as finite element simulations of representative unit cells of the 3-D braided composites, over a range of braid angles and volume fractions. The accuracy of the isostrain model is found to be highly sensitive to the braid angles and the fraction of lay-in axial fibers in the composite system. Good correlations between isostrain model predictions of elastic moduli and measurements were observed when the loading direction is oriented along one of the fiber directions and is significantly away from the other fiber systems in the unit cell. In other situations, however, the isostrain model predictions were in significant errors. This study also reports on the influence of various modeling parameters in the development of finite element models for the simulation of the 3-D textile composite unit cells.

  20. Insights from 3D numerical simulations on the dynamics of the India-Asia collision zone

    NASA Astrophysics Data System (ADS)

    Pusok, A. E.; Kaus, B.; Popov, A.

    2013-12-01

    The dynamics of the India-Asia collision zone remains one of the most remarkable topics of the current research interest: the transition from subduction to collision and uplift, followed by the rise of the abnormally thick Tibetan plateau, and the deformation at its Eastern and Western syntaxes, are processes still not fully understood. Models that have addressed this topic include wholescale underthrusting of Indian lithospheric mantle under Tibet, distributed homogeneous shortening or the thin-sheet model, slip-line field model for lateral extrusion or lower crustal flow models for the exhumation of the Himalayan units and lateral spreading of the Tibetan plateau. Of these, the thin-sheet model has successfully illustrated some of the basic physics of continental collision and has the advantage of a 3D model being reduced to 2D, but one of its major shortcomings is that it cannot simultaneously represent channel flow and gravitational collapse of the mantle lithosphere, since these mechanisms require the lithosphere to interact with the underlying mantle, or to have a vertically non-homogeneous rheology. As a consequence, 3D models are emerging as powerful tools to understand the dynamics of coupled systems. However, because of yet recent developments and various complexities, the current 3D models simulating the dynamics of continent collision zones have relied on certain explicit assumptions, such as replacing part of the asthenosphere with various types of boundary conditions that mimic the effect of mantle flow, in order to focus on the lithospheric/crustal deformation. Here, we employ the parallel 3D code LaMEM (Lithosphere and Mantle Evolution Model), with a finite difference staggered grid solver, which is capable of simulating lithospheric deformation while simultaneously taking mantle flow and a free surface into account. We present qualitative results on lithospheric and upper-mantle scale simulations in which the Indian lithosphere is subducted and

  1. Tidal dynamics of the Terminos Lagoon, Mexico: observations and 3D numerical modelling

    NASA Astrophysics Data System (ADS)

    Contreras Ruiz Esparza, Adolfo; Douillet, Pascal; Zavala-Hidalgo, Jorge

    2014-09-01

    The tidal circulation patterns in the Terminos Lagoon were studied based on the analysis of 1 year of measurements and numerical simulations using a baroclinic 3D hydrodynamic model, the MARS3D. A gauging network was installed consisting of six self-recording pressure-temperature sensors, a tide gauge station and two current profilers, with pressure and temperature sensors moored in the main lagoon inlets. Model simulations were validated against current and sea level observations and were used to analyse the circulation patterns caused by the tidal forcing. The numerical model was forced with eight harmonic components, four diurnal ( K 1, O 1, P 1, Q 1) and four semi-diurnal ( M 2, S 2, N 2, K 2), extracted from the TPX0.7 database. The tidal patterns in the study area vary from mixed, mainly diurnal in the two main inlets of the lagoon, to diurnal in its interior. The tidal residual circulation inside the lagoon is dominated by a cyclonic gyre. The results indicate a net flux from the southwest Ciudad del Carmen inlet (CdC) towards the northeast Puerto Real inlet (PtR) along the southern side of the lagoon and the opposite in the northern side. The results indicate two areas of strong currents in the vicinity of the inlets and weak currents inside the lagoon. The area of strong currents in the vicinity of the CdC inlet is larger than that observed in the PtR inlet. Nevertheless, the current analysis indicates that the highest current speeds, which can reach a magnitude of 1.9 m s-1, occurred in PtR. A further analysis of the tide distortion in the inlets revealed that both passages are ebb dominated.

  2. Laser-assisted direct ink writing of planar and 3D metal architectures

    NASA Astrophysics Data System (ADS)

    Skylar-Scott, Mark A.; Gunasekaran, Suman; Lewis, Jennifer A.

    2016-05-01

    The ability to pattern planar and freestanding 3D metallic architectures at the microscale would enable myriad applications, including flexible electronics, displays, sensors, and electrically small antennas. A 3D printing method is introduced that combines direct ink writing with a focused laser that locally anneals printed metallic features “on-the-fly.” To optimize the nozzle-to-laser separation distance, the heat transfer along the printed silver wire is modeled as a function of printing speed, laser intensity, and pulse duration. Laser-assisted direct ink writing is used to pattern highly conductive, ductile metallic interconnects, springs, and freestanding spiral architectures on flexible and rigid substrates.

  3. Laser-assisted direct ink writing of planar and 3D metal architectures.

    PubMed

    Skylar-Scott, Mark A; Gunasekaran, Suman; Lewis, Jennifer A

    2016-05-31

    The ability to pattern planar and freestanding 3D metallic architectures at the microscale would enable myriad applications, including flexible electronics, displays, sensors, and electrically small antennas. A 3D printing method is introduced that combines direct ink writing with a focused laser that locally anneals printed metallic features "on-the-fly." To optimize the nozzle-to-laser separation distance, the heat transfer along the printed silver wire is modeled as a function of printing speed, laser intensity, and pulse duration. Laser-assisted direct ink writing is used to pattern highly conductive, ductile metallic interconnects, springs, and freestanding spiral architectures on flexible and rigid substrates.

  4. Beat the diffraction limit in 3D direct laser writing in photosensitive glass.

    PubMed

    Bellec, Matthieu; Royon, Arnaud; Bousquet, Bruno; Bourhis, Kevin; Treguer, Mona; Cardinal, Thierry; Richardson, Martin; Canioni, Lionel

    2009-06-08

    Three-dimensional (3D) femtosecond laser direct structuring in transparent materials is widely used for photonic applications. However, the structure size is limited by the optical diffraction. Here we report on a direct laser writing technique that produces subwavelength nanostructures independently of the experimental limiting factors. We demonstrate 3D nanostructures of arbitrary patterns with feature sizes down to 80 nm, less than one tenth of the laser processing wavelength. Its ease of implementation for novel nanostructuring, with its accompanying high precision will open new opportunities for the fabrication of nanostructures for plasmonic and photonic devices and for applications in metamaterials.

  5. Laser-assisted direct ink writing of planar and 3D metal architectures

    PubMed Central

    Skylar-Scott, Mark A.; Gunasekaran, Suman; Lewis, Jennifer A.

    2016-01-01

    The ability to pattern planar and freestanding 3D metallic architectures at the microscale would enable myriad applications, including flexible electronics, displays, sensors, and electrically small antennas. A 3D printing method is introduced that combines direct ink writing with a focused laser that locally anneals printed metallic features “on-the-fly.” To optimize the nozzle-to-laser separation distance, the heat transfer along the printed silver wire is modeled as a function of printing speed, laser intensity, and pulse duration. Laser-assisted direct ink writing is used to pattern highly conductive, ductile metallic interconnects, springs, and freestanding spiral architectures on flexible and rigid substrates. PMID:27185932

  6. The Three-Dimensional (3D) Numerical Stability Analysis of Hyttemalmen Open-Pit

    NASA Astrophysics Data System (ADS)

    Cała, Marek; Kowalski, Michał; Stopkowicz, Agnieszka

    2014-10-01

    The purpose of this paper was to perform the 3D numerical calculations allowing slope stability analysis of Hyttemalmen open pit (location Kirkenes, Finnmark Province, Norway). After a ramp rock slide, which took place in December 2010, as well as some other small-scale rock slope stability problems, it proved necessary to perform a serious stability analyses. The Hyttemalmen open pit was designed with a depth up to 100 m, a bench height of 24 m and a ramp width of 10 m. The rock formation in the iron mining district of Kirkenes is called the Bjornevaten Group. This is the most structurally complicated area connected with tectonic process such as folding, faults and metamorphosis. The Bjornevaten Group is a volcano-sedimentary sequence. Rock slope stability depends on the mechanical properties of the rock, hydro-geological conditions, slope topography, joint set systems and seismic activity. However, rock slope stability is mainly connected with joint sets. Joints, or general discontinuities, are regarded as weak planes within rock which have strength reducing consequences with regard to rock strength. Discontinuities within the rock mass lead to very low tensile strength. Several simulations were performed utilising the RocLab (2007) software to estimate the gneiss cohesion for slopes of different height. The RocLab code is dedicated to estimate rock mass strength using the Hoek-Brown failure criterion. Utilising both the GSI index and the Hoek-Brown strength criterion the equivalent Mohr-Coulomb parameters (cohesion and angle of internal friction) can be calculated. The results of 3D numerical calculations (with FLA3D code) show that it is necessary to redesign the slope-bench system in the Hyttemalmen open pit. Changing slope inclination for lower stages is recommended. The minimum factor of safety should be equal 1.3. At the final planned stage of excavation, the factor of safety drops to 1.06 with failure surface ranging through all of the slopes. In the case

  7. Zig-Zag Thermal-Chemical 3-D Instabilities in the Mantle Wedge: Numerical Study

    NASA Astrophysics Data System (ADS)

    Zhu, G.; Gerya, T. V.; Arcay, D.; Yuen, D. A.

    2008-12-01

    To understand the plume initiation and propagation it is important to understand whether small-scale convection is occurring under the back-arc in the Low Viscosity Wedge(LVW) and its implication on the island-arc volcanism. Honda et al. [Honda and Saito, 2003; Honda, et al., 2007]) already deployed small- scale convection in the Low Viscosity Wedge (LVW) above a subducting slab with kinematically imposed velocity boundary condition. They have suggested that a roll (finger)-like pattern of hot and cold anomalies emerges in the mantle wedge above the subducting slab. Here, we perform three-dimensional coupled petrological-thermomechanical numerical simulations of intraoceanic one-sided subduction with spontaneously bending retreating slab characterized by weak hydrated upper interface by using multigrid approach combined with characteristics-based marker-in-cell method with conservative finite difference schemes[Gerya and Yuen, 2003a], to investigate the 3D instabilities above the slab and lateral variation along the arc. Our results show that water released from subducting slab through dehydration reactions may lower the viscosity of the mantle. It allows the existence of wave-like small-scale convection in the LVW, which is shown as roll-like structure in 2D petrological-thermomechanical numerical experiments [Gorczyk et al., 2006] using in-situ rock properties computed on the basis of Gibbs free energy minimization. However, in our 3D cases, the rolls aligning with the arc mainly occur earlier , while zig-zag small-scale thermal-chemical instabilities may episodically form above the slab at later stages, which is different from the aligning finger-like pattern in purely thermal models (Honda et al,2003;2007). Also in contrast to thermal convection chemically buoyant hydrated plumes rising from the slab in our models are actually colder then the mantle wedge [Gerya and Yuen 2003b] which also strongly modify both the convection pattern and the seismic structure in

  8. 3-D Numerical Simulation of Hydrostatic Tests of Porous Rocks Using Adapted Constitutive Model

    NASA Astrophysics Data System (ADS)

    Chemenda, A. I.; Daniel, M.

    2014-12-01

    The high complexity and poor knowledge of the constitutive properties of porous rocks are principal obstacles for the modeling of their deformation. Normally, the constitutive lows are to be derived from the experimental data (nominal strains and stresses). They are known, however, to be sensitive to the mechanical instabilities within the rock specimen and the boundary (notably friction) conditions at its ends. To elucidate the impact of these conditions on the measured mechanical response we use 3-D finite-difference simulations of experimental tests. Modeling of hydrostatic tests was chosen because it does not typically involve deformation instabilities. The ends of the cylindrical 'rock sample' are in contact with the 'steel' elastic platens through the frictional interfaces. The whole system is subjected to a normal stress Pc applied to the external model surface. A new constitutive model of porous rocks with the cap-type yield function is used. This function is quadratic in the mean stress σm and depends on the inelastic strain γp in a way to generate strain softening at small σm and strain-hardening at high σm. The corresponding material parameters are defined from the experimental data and have clear interpretation in terms of the geometry of the yield surface. The constitutive model with this yield function and the Drucker-Prager plastic potential has been implemented in 3-D dynamic explicit code Flac3D. The results of an extensive set of numerical simulations at different model parameters will be presented. They show, in particular, that the shape of the 'numerical' hydrostats is very similar to that obtained from the experimental tests and that it is practically insensitive to the interface friction. On the other hand, the stress and strain fields within the specimen dramatically depend on this parameter. The inelastic deformation at the specimen's ends starts well before reaching the grain crushing pressure P* and evolves heterogeneously with Pc

  9. Numerical 3D model of viscous turbulent flow in one stage gas turbine and its experimental validation

    NASA Astrophysics Data System (ADS)

    Starodubtsev, Y. V.; Gogolev, I. G.; Solodov, V. G.

    2005-06-01

    The paper describes 3D numerical Reynolds Averaged Navier-Stokes (RANS) model and approximate sector approach for viscous turbulent flow through flow path of one stage axial supercharge gas turbine of marine diesel engine. Computational data are tested by comparison with experimental data. The back step flow path opening and tip clearance jet are taken into account. This approach could be applied for variety of turbine theory and design tasks: for offer optimal design in order to minimize kinetic energy stage losses; for solution of partial supply problem; for analysis of flow pattern in near extraction stages; for estimation of rotational frequency variable forces on blades; for sector vane adjustment (with thin leading edges mainly), for direct flow modeling in the turbine etc. The development of this work could be seen in the direction of unsteady stage model application.

  10. Numerical solutions of the compressible 3-D boundary-layer equations for aerospace configurations with emphasis on LFC

    NASA Technical Reports Server (NTRS)

    Harris, Julius E.; Iyer, Venkit; Radwan, Samir

    1987-01-01

    The application of stability theory in Laminar Flow Control (LFC) research requires that density and velocity profiles be specified throughout the viscous flow field of interest. These profile values must be as numerically accurate as possible and free of any numerically induced oscillations. Guidelines for the present research project are presented: develop an efficient and accurate procedure for solving the 3-D boundary layer equation for aerospace configurations; develop an interface program to couple selected 3-D inviscid programs that span the subsonic to hypersonic Mach number range; and document and release software to the LFC community. The interface program was found to be a dependable approach for developing a user friendly procedure for generating the boundary-layer grid and transforming an inviscid solution from a relatively coarse grid to a sufficiently fine boundary-layer grid. The boundary-layer program was shown to be fourth-order accurate in the direction normal to the wall boundary and second-order accurate in planes parallel to the boundary. The fourth-order accuracy allows accurate calculations with as few as one-fifth the number of grid points required for conventional second-order schemes.

  11. Analytical and numerical aspects in solving the controlled 3D Gross-Pitaevskii equation

    NASA Astrophysics Data System (ADS)

    Fedele, R.; Jovanović, D.; De Nicola, S.; Eliasson, B.; Shukla, P. K.

    2009-11-01

    The results of recently developed investigations, that have been carried out within the framework of the controlling potential method (CPM), are reviewed. This method allows one to decompose a three dimensional (3D) Gross-Pitaevskii equation (GPE) into the pair of coupled Schrödinger-type equations. Under suitable mathematical conditions, the solutions of the 3D controlled GPE can be constructed from the solutions of a 2D linear Schrödinger equation (the transverse component of the GPE) coupled with a 1D nonlinear Schrödinger equation (the longitudinal component of the GPE). Such decomposition allows one to cast the solutions in the form of the product of the solutions of the transverse and the longitudinal components of the GPE. The coupling between these two equations is the functional of both the transverse and the longitudinal profiles. It is shown that the CPM can be used to obtain a new class of three-dimensional solitary waves solutions of the GPE, which governs the dynamics of Bose-Einstein condensates. By imposing an external controlling potential, the desired time-dependent shape of the localized BECs is obtained. The stability of the exact solutions was checked with direct simulations of the time -dependent, three-dimensional GPE. Our simulations show that the localized condensates are stable with respect to perturbed initial conditions.

  12. Analytical and numerical aspects in solving the controlled 3D Gross-Pitaevskii equation

    SciTech Connect

    Fedele, R.; Jovanovic, D.; De Nicola, S.; Eliasson, B.; Shukla, P. K.

    2009-11-10

    The results of recently developed investigations, that have been carried out within the framework of the controlling potential method (CPM), are reviewed. This method allows one to decompose a three dimensional (3D) Gross-Pitaevskii equation (GPE) into the pair of coupled Schroedinger-type equations. Under suitable mathematical conditions, the solutions of the 3D controlled GPE can be constructed from the solutions of a 2D linear Schroedinger equation (the transverse component of the GPE) coupled with a 1D nonlinear Schroedinger equation (the longitudinal component of the GPE). Such decomposition allows one to cast the solutions in the form of the product of the solutions of the transverse and the longitudinal components of the GPE. The coupling between these two equations is the functional of both the transverse and the longitudinal profiles. It is shown that the CPM can be used to obtain a new class of three-dimensional solitary waves solutions of the GPE, which governs the dynamics of Bose-Einstein condensates. By imposing an external controlling potential, the desired time-dependent shape of the localized BECs is obtained. The stability of the exact solutions was checked with direct simulations of the time -dependent, three-dimensional GPE. Our simulations show that the localized condensates are stable with respect to perturbed initial conditions.

  13. An approach to 3D magnetic field calculation using numerical and differential algebra methods

    SciTech Connect

    Caspi, S.; Helm, M.; Laslett, L.J.; Brady, V.O.

    1992-07-17

    Motivated by the need for new means for specification and determination of 3D fields that are produced by electromagnetic lens elements in the region interior to coil windings and seeking to obtain techniques that will be convenient for accurate conductor placement and dynamical study of particle motion, we have conveniently gene the representation of a 2D magnetic field to 3D. We have shown that the 3 dimensioal magnetic field components of a multipole magnet in the curl-fire divergence-fire region near the axis r=0 can be derived from one dimensional functions A{sub n}(z) and their derivatives (part 1). In the region interior to coil windings of accelerator magnets the three spatial components of magnet fields can be expressed in terms of harmonic components'' proportional to functions sin (n{theta}) or cos (n{theta}) of the azimuthal angle. The r,z dependence of any such component can then be expressed in terms of powers of r times functions A{sub n}(z) and their derivatives. For twodimensional configurations B{sub z} of course is identically zero, the derivatives of A{sub n}(z) vanish, and the harmonic components of the transverse field then acquire a simple proportionality B{sub r,n} {proportional to} r{sup n-1} sin (n{theta}),B{sub {theta},n} {proportional to} r{sup n-1} cos (n{theta}), whereas in a 3-D configuration the more complex nature of the field gives rise to additional so-called psuedomultipole'' components as judged by additional powers of r required in the development of the field. Computation of the 3-D magnetic field arising at a sequence of field points, as a direct result of a specified current configuration or coil geometry, can be calculated explicitly through use of the Biot-Savart law and from such data the coefficients can then be derived for a general development of the type indicated above. We indicate, discuss, and illustrate two means by which this development may be performed.

  14. Crustal deformation dynamics and stress evolution during seamount subduction: High-resolution 3-D numerical modeling

    NASA Astrophysics Data System (ADS)

    Ruh, Jonas B.; Sallarès, Valentí; Ranero, César R.; Gerya, Taras

    2016-09-01

    Seamounts or submarine volcanoes frequently collide with the overriding crust along presently active subduction zones locally modifying stress and permanent deformation patterns. Dynamics of this process is not fully understood, and several end-member scenarios of seamount-crust interaction are proposed. Here we use high-resolution 3-D numerical models to investigate evolution of crustal deformation and stress distribution within the upper plate induced by the underthrusting of subducting seamounts. The dynamical effects of the upper plate strength, subduction interface strength, and strain weakening of the crust are investigated. Experiment results demonstrate that characteristic crustal fracturing patterns formed in response to different seamount-crust interaction scenarios. Indenting seamounts strongly deform the overriding plate along a corridor as wide as the underthrusting seamount by constantly shifting subvertical shear zones rooted at the seamount extensions. A reentrant develops during initial seamount collision. A topographic bulge atop the seamount and lateral ridges emerge from further seamount subduction. Obtained stress pattern shows areas of large overpressure above the rearward and large underpressure above the trenchward flank of the seamount. Results of numerical experiments are consistent with seismic reflection images and seismic velocity models of the upper plate in areas of seamount subduction along the Middle America Trench and give important insights into the long-lasting question, whether subducting seamounts and rough seafloor act as barriers or asperities for megathrust earthquakes.

  15. Numerical simulation of unsteady flow characteristics for cavitation around a 3-D hydrofoil

    NASA Astrophysics Data System (ADS)

    Ahn, S. H.; Xiao, Y. X.; Wang, Z. W.

    2015-01-01

    At present it is possible to predict more accurately by various numerical methods established for cavitation simulation around a hydrofoil. However, for the solution of the complex unsteady cavity flow, it is still marginal. In this paper, numerical method is adopted to simulate cavitation around 3-D NACA0015 hydrofoil with homogeneous two-phase flow calculation using commercial code CFX-solver with two turbulence models, the standard RNG k-epsilon turbulence model and the modified RNG k-epsilon turbulence model respectively. First, pressure coefficient for non-cavitating flow, time averaged values of unsteady cavity flow around a hydrofoil are verified to simulate more closely to an actual cavity flow. And then frequency analysis is performed with Fast Fourier Transform. The results show that the calculation results with modified RNG k-epsilon turbulence model agree with experimental results in terms of mean cavity length and pressure drop, but the unsteady flow characteristics of oscillating cavitation still deviate slightly in terms of unsteady cavity flow.

  16. 3D flame topography obtained by tomographic chemiluminescence with direct comparison to planar Mie scattering measurements.

    PubMed

    Xu, Wenjiang; Wickersham, A J; Wu, Yue; He, Fan; Ma, Lin

    2015-03-20

    This work reports the measurements of 3D flame topography using tomographic chemiluminescence and its validation by direct comparison against planar Mie scattering measurements. Tomographic measurements of the 3D topography of various well-controlled laboratory flames were performed using projections measured by seven cameras, and a simultaneous Mie scattering measurement was performed to measure a 2D cross section of the 3D flame topography. The tomographic measurements were based on chemiluminescence emissions from the flame, and the Mie scattering measurements were based on micrometer-size oil droplets seeded into the flow. The flame topography derived from the 3D tomographic and the Mie scattering measurement was then directly compared. The results show that the flame topography obtained from tomographic chemiluminescence and the Mie measurement agreed qualitatively (i.e., both methods yielded the same profile of the flame fronts), but a quantitative difference on the order of millimeters was observed between these two methods. These results are expected to be useful for understanding the capabilities and limitations of the 3D tomographic and Mie scattering techniques in combustion diagnostics.

  17. Femtosecond laser 3D nanofabrication in glass: enabling direct write of integrated micro/nanofluidic chips

    NASA Astrophysics Data System (ADS)

    Cheng, Ya; Liao, Yang; Sugioka, Koji

    2014-03-01

    The creation of complex three-dimensional (3D) fluidic systems composed of hollow micro- and nanostructures embedded in transparent substrates has attracted significant attention from both scientific and applied research communities. However, it is by now still a formidable challenge to build 3D micro- and nanofluidic structures with arbitrary configurations using conventional planar lithographic fabrication methods. As a direct and maskless fabrication technique, femtosecond laser micromachining provides a straightforward approach for high-precision spatial-selective modification inside transparent materials through nonlinear optical absorption. Here, we demonstrate rapid fabrication of high-aspect-ratio micro- and/or nanofluidic structures with various 3D configurations in glass substrates by femtosecond laser direct writing. Based on this approach, we demonstrate several functional micro- and nanofluidic devices including a 3D passive microfluidic mixer, a capillary electrophoresis (CE) analysis chip, and an integrated micro-nanofluidic system for single DNA analysis. This technology offers new opportunities to develop novel 3D micro-nanofluidic systems for a variety of lab-on-a-chip applications.

  18. Direct cell writing of 3D microorgan for in vitro pharmacokinetic model.

    PubMed

    Chang, Robert; Nam, Jae; Sun, Wei

    2008-06-01

    A novel targeted application of tissue engineering is the development of an in vitro pharmacokinetic model for drug screening and toxicology. An in vitro pharmacokinetic model is needed to realistically and reliably predict in vivo human response to drug administrations and potential toxic exposures. This paper details the fabrication process development and adaptation of microfluidic devices for the creation of such a physiologically relevant pharmacokinetic model. First, an automated syringe-based, layered direct cell writing (DCW) bioprinting process creates a 3D microorgan that biomimics the cell's natural microenvironment with enhanced functionality. Next, soft lithographic micropatterning techniques are used to fabricate a microscale in vitro device to house the 3D microorgan. This paper demonstrates the feasibility of the DCW process for freeform biofabrication of 3D cell-encapsulated hydrogel-based tissue constructs with defined reproducible patterns, direct integration of 3D constructs onto a microfluidic device for continuous perfusion drug flow, and characterization of 3D tissue constructs with predictable cell viability/proliferation outcomes and enhanced functionality over traditional culture methods.

  19. PEGASUS. 3D Direct Simulation Monte Carlo Code Which Solves for Geometrics

    SciTech Connect

    Bartel, T.J.

    1998-12-01

    Pegasus is a 3D Direct Simulation Monte Carlo Code which solves for geometries which can be represented by bodies of revolution. Included are all the surface chemistry enhancements in the 2D code Icarus as well as a real vacuum pump model. The code includes multiple species transport.

  20. 3D Direct Simulation Monte Carlo Code Which Solves for Geometrics

    SciTech Connect

    Bartel, Timothy J.

    1998-01-13

    Pegasus is a 3D Direct Simulation Monte Carlo Code which solves for geometries which can be represented by bodies of revolution. Included are all the surface chemistry enhancements in the 2D code Icarus as well as a real vacuum pump model. The code includes multiple species transport.

  1. Tsunamis generated by 3D deformable landslides in various scenarios: laboratory experiments and numerical modeling

    NASA Astrophysics Data System (ADS)

    McFall, B. C.; Fritz, H. M.; Horrillo, J. J.; Mohammed, F.

    2014-12-01

    Landslide generated tsunamis such as Lituya Bay, Alaska 1958 account for some of highest recorded tsunami runup heights. Source and runup scenarios based on real world events are physically modeled using generalized Froude similarity in the three dimensional NEES tsunami wave basin at Oregon State University. A novel pneumatic landslide tsunami generator (LTG) was deployed to simulate landslides with varying geometry and kinematics. The bathymetric and topographic scenarios tested with the LTG are the basin-wide propagation and runup, fjord, curved headland fjord and a conical island setting representing a landslide off an island or a volcano flank collapse. The LTG consists of a sliding box filled with 1,350 kg of landslide material which is accelerated by pneumatic pistons down slope. Two different landslide materials are used to study the granulometry effects: naturally rounded river gravel and cobble mixtures. Water surface elevations are recorded by an array of resistance wave gauges. The landslide deformation is measured from above and underwater camera recordings. The landslide deposit is measured on the basin floor with a multiple transducer acoustic array (MTA). Landslide surface reconstruction and kinematics are determined with a stereo particle image velocimetry (PIV) system. Wave runup is recorded with resistance wave gauges along the slope and verified with video image processing. The measured landslide and wave parameters are compared between the planar hill slope used in various scenarios and the convex hill slope of the conical island. The energy conversion rates from the landslide motion to the wave train is quantified for the planar and convex hill slopes. The wave runup data on the opposing headland is analyzed and evaluated with wave theories. The measured landslide and tsunami data serve to validate and advance three-dimensional numerical landslide tsunami prediction models. Two 3D Navier-Stokes models were tested, the commercial code FLOW-3D

  2. 3-D Numerical Investigation of the Tsaoling Landslide Induced by Chi-Chi Earthquake, Taiwan.

    NASA Astrophysics Data System (ADS)

    Tang, C.; Hu, J.

    2004-12-01

    Large landslides occurred in the mountainous area near the epicenter of the Sept. 21st, 1999, Chi-Chi earthquake in central Taiwan. These landslides were triggered by the Mw = 7.6 earthquake, which resulted in more than 2,400 human casualties and widespread damage. The 1999 Chi-Chi earthquake triggered a catastrophic Tsaloing landslide, which mobilized about 0.125 km3 of rock and soil that slid across the Chingshui River and created a 5 km long natural dam. One fifth of the landslide mass dropped into the Chingshui River, the rest jumped over the river. At least five large landslides occurred in Tsaoling area are induced by big earthquake and heavy rainfalls since 1862 to 1999. Geological investigation shows that the prevailing attitude of sedimentary formation is about N45W with a dipping angle of 12S. First we used Remark Method to calculate the stability of slope. The bottom of slope has been eroded by Chingshui stream, and the PGA (Peak Ground Acceleration) in Chi-Chi earthquake was exceeded the yield acceleration along the sliding surface. The landslide mechanism may be including flowing, rolling, bouncing and sliding. The rock on the fault plane during faulting can generate pseudotachylyte resulted from melted rock by frictional heat energy along the sliding surface. The frictional melted rocks were found out in the Chiu-Fen-Erh-Shan collapses. However, we didn¡¦t found out the frictional melted rock in Tsaoling area. If we calculated the kinetic energy which was converted to heat energy, the increase of temperature was enough to melt the rocks on sliding surface. When the rocks on the sliding surface had been melted, the friction on the sliding surface must be decrease. Therefore, the 0.125 km3 debris had sufficient kinetic energy to across Chingshui River to the other side of the river. Using 3D distinct-element modeling (PFC3d code), we try to simulate kinematic process of Tsaoling landslide. Our numerical model was compose of about 10,000 spherical

  3. Direct-write 3D printing of NdFeB bonded magnets

    DOE PAGES

    Compton, Brett Gibson; Kemp, James William; Novikov, Timofei V.; ...

    2016-08-17

    We report a method to fabricate Nd-Fe-B bonded magnets of complex shape via extrusion-based additive manufacturing (AM), also known as 3D-printing. We have successfully formulated a 3D-printable epoxy-based ink for direct-write AM with anisotropic MQA NdFeB magnet particles that can be deposited at room temperature. The new feedstocks contain up to 40 vol.% MQA anisotropic Nd-Fe-B magnet particles, and they are shown to remain uniformly dispersed in the thermoset matrix throughout the deposition process. Ring, bar, and horseshoe-type 3D magnet structures were printed and cured in air at 100°C without degrading the magnetic properties. Lastly, this study provides a newmore » pathway for fabricating Nd-Fe-B bonded magnets with complex geometry at low temperature, and presents new opportunities for fabricating multifunctional hybrid structures and devices.« less

  4. Direct Self-Assembly of a 2D and 3D Star of David.

    PubMed

    Song, Bo; Zhang, Zhe; Wang, Kun; Hsu, Chih-Hao; Bolarinwa, Olapeju; Wang, Jing; Li, Yiming; Yin, Guang-Qiang; Rivera, Edwin; Yang, Hai-Bo; Liu, Changlin; Xu, Bingqian; Li, Xiaopeng

    2017-04-06

    Two- and three-dimensional metallosupramolecules shaped like a Star of David were synthesized by the self-assembly of a tetratopic pyridyl ligand with a 180° diplatinum(II) motif and Pd(II) ions, respectively. In contrast to other strategies, such as template-directed synthesis and stepwise self-assembly, this design enables the formation of 2D and 3D structures in one step and high yield. The structures were characterized by both one-dimensional ((1) H, (13) C, (31) P) and two-dimensional (COSY, NOESY, DOSY) NMR spectroscopy, ESI-MS, ion-mobility mass spectrometry (IM-MS), AFM, and TEM. The stabilities of the 2D and 3D structures were measured and compared by gradient tandem mass spectrometry (gMS(2) ). The high stability of the 3D Star of David was correlated to its high density of coordination sites (DOCS).

  5. Direct-write 3D printing of NdFeB bonded magnets

    SciTech Connect

    Compton, Brett Gibson; Kemp, James William; Novikov, Timofei V.; Pack, Robert Cody; Nlebedim, Cajetan I.; Duty, Chad Edward; Rios, Orlando; Paranthaman, M. Parans

    2016-08-17

    We report a method to fabricate Nd-Fe-B bonded magnets of complex shape via extrusion-based additive manufacturing (AM), also known as 3D-printing. We have successfully formulated a 3D-printable epoxy-based ink for direct-write AM with anisotropic MQA NdFeB magnet particles that can be deposited at room temperature. The new feedstocks contain up to 40 vol.% MQA anisotropic Nd-Fe-B magnet particles, and they are shown to remain uniformly dispersed in the thermoset matrix throughout the deposition process. Ring, bar, and horseshoe-type 3D magnet structures were printed and cured in air at 100°C without degrading the magnetic properties. Lastly, this study provides a new pathway for fabricating Nd-Fe-B bonded magnets with complex geometry at low temperature, and presents new opportunities for fabricating multifunctional hybrid structures and devices.

  6. Numerical 3D models support two distinct hydrothermal circulation systems at fast spreading ridges

    NASA Astrophysics Data System (ADS)

    Hasenclever, Jörg; Theissen-Krah, Sonja; Rüpke, Lars

    2013-04-01

    We present 3D numerical calculations of hydrothermal fluid flow at fast spreading ridges. The setup of the 3D models is based our previous 2D studies, in which we have coupled numerical models for crustal accretion and hydrothermal fluid flow. One result of these calculations is a crustal permeability field that leads to a thermal structure in the crust that matches seismic tomography data of the East Pacific Rise (EPR). The 1000°C isotherm obtained from the 2D results is now used as the lower boundary of the 3D model domain, while the upper boundary is a smoothed bathymetry of the EPR. The same permeability field as in the 2D models is used, with the highest permeability at the ridge axis and a decrease with both depth and distance to the ridge. Permeability is also reduced linearly between 600 and 1000°C. Using a newly developed parallel finite element code written in Matlab that solves for thermal evolution, fluid pressure and Darcy flow, we simulate the flow patterns of hydrothermal circulation in a segment of 5000m along-axis, 10000m across-axis and up to 5000m depth. We observe two distinct hydrothermal circulation systems: An on-axis system forming a series of vents with a spacing ranging from 100 to 500m that is recharged by nearby (100-200m) downflows on both sides of the ridge axis. Simultaneously a second system with much broader extensions both laterally and vertically exists off-axis. It is recharged by fluids intruding between 1500m to 5000m off-axis and sampling both upper and lower crust. These fluids are channeled in the deepest and hottest regions with high permeability and migrate up-slope following the 600°C isotherm until reaching the edge of the melt lens. Depending on the width of the melt lens these off-axis fluids either merge with the on-axis hydrothermal system or form separate vents. We observe separate off-axis vent fields if the magma lens half-width exceeds 1000m and confluence of both systems for half-widths smaller than 500m. For

  7. 3D numerical modeling of an anthropogenic sinkhole in the Marsala area of western Sicily

    NASA Astrophysics Data System (ADS)

    Bonamini, Marco; Di Maggio, Cipriano; Lollino, Piernicola; Madonia, Giuliana; Parise, Mario; Vattano, Marco

    2013-04-01

    processes, based on rock laboratory testing data and a detailed reconstruction of the underground cave geometry. At this goal, we took advantage of detailed topographic surveys of the underground quarry, carried out before (year 2000) and after occurrence of one the sinkholes, that opened in July 2011 at the eastern sector of the town of Marsala, causing significant damage to a school. In the implementation of the 3D-model, the geomechanical survey of the calcarenite rock mass was also taken into account, as a required input layer depicting the main discontinuity systems, and their main features (pervasiveness, joint opening and spacing, etc.). Relevant differences between the results from 2-D and 3-D analyses are pointed out in the paper, highlighting the need to perform 3D-modeling in order to define the real instability conditions of the rock mass, and to evaluate the possibility of sinkhole occurrence at the surface.

  8. Computational time analysis of the numerical solution of 3D electrostatic Poisson's equation

    NASA Astrophysics Data System (ADS)

    Kamboh, Shakeel Ahmed; Labadin, Jane; Rigit, Andrew Ragai Henri; Ling, Tech Chaw; Amur, Khuda Bux; Chaudhary, Muhammad Tayyab

    2015-05-01

    3D Poisson's equation is solved numerically to simulate the electric potential in a prototype design of electrohydrodynamic (EHD) ion-drag micropump. Finite difference method (FDM) is employed to discretize the governing equation. The system of linear equations resulting from FDM is solved iteratively by using the sequential Jacobi (SJ) and sequential Gauss-Seidel (SGS) methods, simulation results are also compared to examine the difference between the results. The main objective was to analyze the computational time required by both the methods with respect to different grid sizes and parallelize the Jacobi method to reduce the computational time. In common, the SGS method is faster than the SJ method but the data parallelism of Jacobi method may produce good speedup over SGS method. In this study, the feasibility of using parallel Jacobi (PJ) method is attempted in relation to SGS method. MATLAB Parallel/Distributed computing environment is used and a parallel code for SJ method is implemented. It was found that for small grid size the SGS method remains dominant over SJ method and PJ method while for large grid size both the sequential methods may take nearly too much processing time to converge. Yet, the PJ method reduces computational time to some extent for large grid sizes.

  9. 3D Numeric modeling of slab-plume interaction in Kamchatka

    NASA Astrophysics Data System (ADS)

    Constantin Manea, Vlad; Portnyagin, Maxim; Manea, Marina

    2010-05-01

    Volcanic rocks located in the central segment of the Eastern Volcanic Belt of Kamchatka show a high variability, both in age as well as in the geochemical composition. Three principal groups have been identified, an older group (7-12 my) represented by rich alkaline and transitional basalts, a 7-8 my group exemplified by alkaline basalts of extreme plume type, and a younger group (3-8 my) characterized by calc-alkaline andesites and dacites rocks. Moreover, the younger group shows an adakitic signature. The magmas are assumed to originate from two principle sources: from a subduction modified Pacific MORB-type and from plume-type mantle. In this paper we study the interaction of a cold subducting slab and a hot plume by means of 3D numeric modeling integrated 30 my back in time. Our preliminary modeling results show a short episode of plume material inflowing into the mantle wedge at ~10 my consistent with the second rocks group (plume like). Also our models predict slab edge melting consistent with the youngest group.

  10. Development of a 3D numerical methodology for fast prediction of gun blast induced loading

    NASA Astrophysics Data System (ADS)

    Costa, E.; Lagasco, F.

    2014-05-01

    In this paper, the development of a methodology based on semi-empirical models from the literature to carry out 3D prediction of pressure loading on surfaces adjacent to a weapon system during firing is presented. This loading is consequent to the impact of the blast wave generated by the projectile exiting the muzzle bore. When exceeding a pressure threshold level, loading is potentially capable to induce unwanted damage to nearby hard structures as well as frangible panels or electronic equipment. The implemented model shows the ability to quickly predict the distribution of the blast wave parameters over three-dimensional complex geometry surfaces when the weapon design and emplacement data as well as propellant and projectile characteristics are available. Considering these capabilities, the use of the proposed methodology is envisaged as desirable in the preliminary design phase of the combat system to predict adverse effects and then enable to identify the most appropriate countermeasures. By providing a preliminary but sensitive estimate of the operative environmental loading, this numerical means represents a good alternative to more powerful, but time consuming advanced computational fluid dynamics tools, which use can, thus, be limited to the final phase of the design.

  11. Numerical Calculations of 3-D High-Lift Flows and Comparison with Experiment

    NASA Technical Reports Server (NTRS)

    Compton, William B, III

    2015-01-01

    Solutions were obtained with the Navier-Stokes CFD code TLNS3D to predict the flow about the NASA Trapezoidal Wing, a high-lift wing composed of three elements: the main-wing element, a deployed leading-edge slat, and a deployed trailing-edge flap. Turbulence was modeled by the Spalart-Allmaras one-equation turbulence model. One case with massive separation was repeated using Menter's two-equation SST (Menter's Shear Stress Transport) k-omega turbulence model in an attempt to improve the agreement with experiment. The investigation was conducted at a free stream Mach number of 0.2, and at angles of attack ranging from 10.004 degrees to 34.858 degrees. The Reynolds number based on the mean aerodynamic chord of the wing was 4.3 x 10 (sup 6). Compared to experiment, the numerical procedure predicted the surface pressures very well at angles of attack in the linear range of the lift. However, computed maximum lift was 5% low. Drag was mainly under predicted. The procedure correctly predicted several well-known trends and features of high-lift flows, such as off-body separation. The two turbulence models yielded significantly different solutions for the repeated case.

  12. Numerical simulations of Rock Avalanches with DAN-3D: from real case to analogue models

    NASA Astrophysics Data System (ADS)

    Longchamp, Céline; Penna, Ivanna; Sauthier, Claire; Jaboyedoff, Michel

    2013-04-01

    Rock avalanches are rapid events with capacity to develop long and unexpected runouts, which can evolve into catastrophic events difficult to predict. In order to better understand unusual travel distances, analogue and numerical modeling are often used. The comparison between real case, and analogue and dynamics models is key to constrain and understand parameters governing rock avalanches run outs. In the Pampeanas range (Argentina), the Potrero de Leyes rock avalanche involved 0.23 km3 of highly fractured metamorphic rocks that spread in the piedmont area without any topographical constrain, resulting in a runout of 4.8 km. In this study we first attempt to apply analogue models to replicate the rock avalanche deposit. The analogue modeling consists into the release of a granular material (calibrated and angular carborundum sand) along a slope, creating similar landscape conditions that the real case. The material is not constrained laterally and spread freely on a flat deposition surface. For a volume of 50 cm3, the runout is 50 cm, the deposit has as length of 10 cm and a width of 19 cm. For a volume of 100 cm3, the runout is 65 cm, the deposit has as length of 25 cm and a width of 30 cm. In a further step we model both the real case and the result of the analogue models. Dynamics models are carried out with DAN-3D, a dynamic model for the prediction of the run out of rapid landslide (O. Hungr, 1995; O. Hugr & S.G. Evans, 1996). The result of the simulations for both volumes tested with the analogue model give satisfactory results. In fact, for the volume of 50 cm3, the deposit has as length of 10 cm and a width of 20 cm and for the volume of 100 cm3, the deposit has as length of 25 cm and a width of 50 cm. The shape and the thickness of the deposit obtained with DAN-3D are also similar with those got with the analogue models.

  13. Experimental and numerical investigation into micro-flow cytometer with 3-D hydrodynamic focusing effect and micro-weir structure.

    PubMed

    Hou, Hui-Hsiung; Tsai, Chien-Hsiung; Fu, Lung-Ming; Yang, Ruey-Jen

    2009-07-01

    This study presents a novel 3-D hydrodynamic focusing technique for micro-flow cytometers. In the proposed approach, the sample stream is compressed initially in the horizontal direction by a set of sheath flows such that it is constrained to the central region of the microchannel and is then focused in the vertical direction by a second pair of sheath flows. Thereafter, the focused sample stream passes over a micro-weir structure positioned directly beneath an optical detection system to capture polystyrene beads fluorescent signal. The microchannel configuration and operational parameters are optimized by performing a series of numerical simulations. An experimental investigation is then performed using a micro-flow cytometer fabricated using conventional micro-electro-mechanical systems techniques and an isotropic wet etching method. The results indicate that the two sets of sheath flows successfully constrain the sample stream within a narrow, well-defined region of the microchannel. Furthermore, the micro-weir structure prompts the separation of a mixed sample of 5 and 10 microm polystyrene beads in the vertical direction and ensures that the beads flow through the detection region of the microchannel in a sequential fashion and can therefore be reliably detected and counted.

  14. Direct Numerical Simulation of Cell Printing

    NASA Astrophysics Data System (ADS)

    Qiao, Rui; He, Ping

    2010-11-01

    Structural cell printing, i.e., printing three dimensional (3D) structures of cells held in a tissue matrix, is gaining significant attention in the biomedical community. The key idea is to use desktop printer or similar devices to print cells into 3D patterns with a resolution comparable to the size of mammalian cells, similar to that in living organs. Achieving such a resolution in vitro can lead to breakthroughs in areas such as organ transplantation and understanding of cell-cell interactions in truly 3D spaces. Although the feasibility of cell printing has been demonstrated in the recent years, the printing resolution and cell viability remain to be improved. In this work, we investigate one of the unit operations in cell printing, namely, the impact of a cell-laden droplet into a pool of highly viscous liquids using direct numerical simulations. The dynamics of droplet impact (e.g., crater formation and droplet spreading and penetration) and the evolution of cell shape and internal stress are quantified in details.

  15. Development of direct-inverse 3-D methods for applied aerodynamic design and analysis

    NASA Technical Reports Server (NTRS)

    Carlson, Leland A.

    1988-01-01

    Several inverse methods have been compared and initial results indicate that differences in results are primarily due to coordinate systems and fuselage representations and not to design procedures. Further, results from a direct-inverse method that includes 3-D wing boundary layer effects, wake curvature, and wake displacement are presented. These results show that boundary layer displacements must be included in the design process for accurate results.

  16. Dynamic coupling between fluid flow and vein growth in fractures: a 3D numerical model

    NASA Astrophysics Data System (ADS)

    Schwarz, J.-O.; Enzmann, F.

    2012-04-01

    Fluid flow is one of the main mass transport mechanisms in the Earth's crust and abundant mineral vein networks are important indicators for fluid flow and fluid rock interaction. These systems are dynamic and part of the so called RTM processes (reaction-transport-mechanics). Understanding of mineral vein systems requires coupling of these processes. Here we present a conceptional model for dynamic vein growth of syntaxial, posttectonic veins generated by advective fluid flow and show first results of a numerical model for this scenario. Vein generation requires three processes to occur: (i) fracture generation by mechanical stress e.g. hydro-fracturing, (ii) flow of a supersaturated fluid on that fracture and (iii) crystallization of phase(s) on or in the fracture. 3D synthetic fractures are generated with the SynFrac code (Ogilvie, et al. 2006). Subsequently solutions of the Navier-Stokes equation for this fracture are computed by a computational fluid dynamics code called GeoDict (Wiegmann 2007). Transport (advective and diffusive) of chemical species to growth sites in the fracture and vein growth are computed by a self-written MATLAB script. The numerical model discretizes the wall rock and fracture geometry by volumetric pixels (voxels). Based on this representation, the model computes the three basic functions for vein generation: (a) nucleation, (b) fluid flow with transport of chemical species and (c) growth. The following conditions were chosen for these three modules. Nucleation is heterogeneous and occurs instantaneously at the wall rock/fracture interface. Advective and diffusive flow of a supersaturated fluid and related transport of chemical species occurs according to the computed fluid flow field by GeoDict. Concentration of chemical species at the inflow is constant, representing external fluid buffering. Changes/decrease in the concentration of chemical species occurs only due to vein growth. Growth of nuclei is limited either by transport of

  17. Numerical model of formation of a 3-D strike-slip fault system

    NASA Astrophysics Data System (ADS)

    Chemenda, Alexandre I.; Cavalié, Olivier; Vergnolle, Mathilde; Bouissou, Stéphane; Delouis, Bertrand

    2016-01-01

    The initiation and the initial evolution of a strike-slip fault are modeled within an elastoplasticity constitutive framework taking into account the evolution of the hardening modulus with inelastic straining. The initial and boundary conditions are similar to those of the Riedel shear experiment. The models first deform purely elastically. Then damage (inelastic deformation) starts at the model surface. The damage zone propagates both normal to the forming fault zone and downwards. Finally, it affects the whole layer thickness, forming flower-like structure in cross-section. At a certain stage, a dense set of parallel Riedel shears forms at shallow depth. A few of these propagate both laterally and vertically, while others die. The faults first propagate in-plane, but then rapidly change direction to make a larger angle with the shear axis. New fault segments form as well, resulting in complex 3-D fault zone architecture. Different fault segments accommodate strike-slip and normal displacements, which results in the formation of valleys and rotations along the fault system.

  18. Early Earth tectonics: A high-resolution 3D numerical modelling approach

    NASA Astrophysics Data System (ADS)

    Fischer, R.; Gerya, T.

    2014-12-01

    Early Earth had a higher amount of remaining radiogenic elements as well as a higher amount of leftover primordial heat. Both contributed to the increased temperature in the Earth's interior and it is mainly this increased mantle potential temperature ΔTp that controls the dynamics of the crust and upper mantle and the style of Early Earth tectonics. For a minor increase in temperature ΔTp < 175 K a subduction-collision style ensues which is largely similar to present day plate tectonics. For a moderate increase in ΔTp = 175-250 K subduction can still occur, however plates are strongly weakened and buckling, delamination and Rayleigh-Taylor style dripping of the plate is observed in addition. For higher temperatures ΔTp > 250 K no subduction can be observed anymore and tectonics is dominated by delamination and Rayleigh-Taylor instabilities. We conduct 3D petrological-thermomechanical numerical modelling experiments of the crust and upper mantle under Early Earth conditions and a plume tectonics model setup. For varying crustal structures and an increased mantle potential temperature ΔTp, a thermal anomaly in the bottom temperature boundary introduces a plume. The model is able to self-sufficiently form depleted mantle lithosphere after repeated melt removal. New crust can be produced in the form of volcanics or plutonics. To simulate differentiation the newly formed crust can have a range in composition from basaltic over dacitic to granitic depending on its source rock. Models show large amounts of subcrustal decompression melting and consequently large amounts of new formed crust which in turn influences the dynamics. Mantle and crust are convecting separately. Dome-shaped plutons of mafic or felsic composition can be observed in the crust. Between these domes elongated belts of upper crust, volcanics and sediments are formed. These structures look similar to, for example, the Kaapvaal craton in South Africa where the elongated shape of the Barberton

  19. The thermal regime of the Campi Flegrei magmatic system reconstructed through 3D numerical simulations

    NASA Astrophysics Data System (ADS)

    Di Renzo, Valeria; Wohletz, Kenneth; Civetta, Lucia; Moretti, Roberto; Orsi, Giovanni; Gasparini, Paolo

    2016-12-01

    We illustrate a quantitative conductive/convective thermal model incorporating a wide range of geophysical, petrological, geological, geochemical and isotopical observations that constrain the thermal evolution and present state of the Campi Flegrei caldera (CFc) magmatic system. The proposed model has been computed on the basis of the current knowledge of: (1) the volcanic and magmatic history of the volcano over the last 44 ka, (2) its underlying crustal structure, and (3) the physical properties of the erupted magmas. 3D numerical simulations of heat conduction and convection within heterogeneous rock/magma materials with evolving heat sources and boundary conditions that simulate magma rise from a deep (≥ 8 km depth) to shallow (2-6 km) reservoirs, magma chamber formation, magma extrusion, caldera collapse, and intra-caldera hydrothermal convection, have been carried out. The evolution of the CFc magmatic system through time has been simulated through different steps related to its changes in terms of depth, location and size of magma reservoirs and their replenishment. The thermal modeling results show that both heat conduction and convection have played an important role in the CFc thermal evolution, although with different timing. The simulated present heat distribution is in agreement with the measured geothermal profiles (Agip, 1987), reproduces the thermal gradient peaks at the CFc margins in correspondence to the anomalies in surface gradients (Corrado et al., 1998), and suggests temperatures of 700 °C at depth of 4 km in the central portion of the caldera, in agreement with the estimated temperature for the brittle-ductile transition (Hill, 1992).

  20. Validation of a numerical 3-D fluid-structure interaction model for a prosthetic valve based on experimental PIV measurements.

    PubMed

    Guivier-Curien, Carine; Deplano, Valérie; Bertrand, Eric

    2009-10-01

    A numerical 3-D fluid-structure interaction (FSI) model of a prosthetic aortic valve was developed, based on a commercial computational fluid dynamics (CFD) software program using an Arbitrary Eulerian Lagrangian (ALE) formulation. To make sure of the validity of this numerical model, an equivalent experimental model accounting for both the geometrical features and the hydrodynamic conditions was also developed. The leaflet and the flow behaviours around the bileaflet valve were investigated numerically and experimentally by performing particle image velocimetry (PIV) measurements. Through quantitative and qualitative comparisons, it was shown that the leaflet behaviour and the velocity fields were similar in both models. The present study allows the validation of a fully coupled 3-D FSI numerical model. The promising numerical tool could be therefore used to investigate clinical issues involving the aortic valve.

  1. Non-Newtonian Fluids Spreading with Surface Tension Effect: 3D Numerical Analysis Using FEM and Experimental Study

    NASA Astrophysics Data System (ADS)

    Hu, Bin; Kieweg, Sarah

    2010-11-01

    Gravity-driven thin film flow down an incline is studied for optimal design of polymeric drug delivery vehicles, such as anti-HIV topical microbicides. We develop a 3D FEM model using non-Newtonian mechanics to model the flow of gels in response to gravity, surface tension and shear-thinning. Constant volume setup is applied within the lubrication approximation scope. The lengthwise profiles of the 3D model agree with our previous 2D finite difference model, while the transverse contact line patterns of the 3D model are compared to the experiments. With incorporation of surface tension, capillary ridges are observed at the leading front in both 2D and 3D models. Previously published studies show that capillary ridge can amplify the fingering instabilities in transverse direction. Sensitivity studies (2D & 3D) and experiments are carried out to describe the influence of surface tension and shear-thinning on capillary ridge and fingering instabilities.

  2. 3-D Direct Simulation Monte Carlo modeling of comet 67P/Churyumov-Gerasimenko

    NASA Astrophysics Data System (ADS)

    Liao, Y.; Su, C.; Finklenburg, S.; Rubin, M.; Ip, W.; Keller, H.; Knollenberg, J.; Kührt, E.; Lai, I.; Skorov, Y.; Thomas, N.; Wu, J.; Chen, Y.

    2014-07-01

    After deep-space hibernation, ESA's Rosetta spacecraft has been successfully woken up and obtained the first images of comet 67P /Churyumov-Gerasimenko (C-G) in March 2014. It is expected that Rosetta will rendezvous with comet 67P and start to observe the nucleus and coma of the comet in the middle of 2014. As the comet approaches the Sun, a significant increase in activity is expected. Our aim is to understand the physical processes in the coma with the help of modeling in order to interpret the resulting measurements and establish observational and data analysis strategies. DSMC (Direct Simulation Monte Carlo) [1] is a very powerful numerical method to study rarefied gas flows such as cometary comae and has been used by several authors over the past decade to study cometary outflow [2,3]. Comparisons between DSMC and fluid techniques have also been performed to establish the limits of these techniques [2,4]. The drawback with 3D DSMC is that it is computationally highly intensive and thus time consuming. However, the performance can be dramatically increased with parallel computing on Graphic Processor Units (GPUs) [5]. We have already studied a case with comet 9P/Tempel 1 where the Deep Impact observations were used to define the shape of the nucleus and the outflow was simulated with the DSMC approach [6,7]. For comet 67P, we intend to determine the gas flow field in the innermost coma and the surface outgassing properties from analyses of the flow field, to investigate dust acceleration by gas drag, and to compare with observations (including time variability). The boundary conditions are implemented with a nucleus shape model [8] and thermal models which are based on the surface heat-balance equation. Several different parameter sets have been investigated. The calculations have been performed using the PDSC^{++} (Parallel Direct Simulation Monte Carlo) code [9] developed by Wu and his coworkers [10-12]. Simulation tasks can be accomplished within 24

  3. Direct 3D bioprinting of perfusable vascular constructs using a blend bioink

    PubMed Central

    Jia, Weitao; Gungor-Ozkerim, P. Selcan; Zhang, Yu Shrike; Yue, Kan; Zhu, Kai; Liu, Wanjun; Pi, Qingment; Byambaa, Batzaya; Dokmeci, Mehmet Remzi; Shin, Su Ryon; Khademhosseini, Ali

    2017-01-01

    Despite the significant technological advancement in tissue engineering, challenges still exist towards the development of complex and fully functional tissue constructs that mimic their natural counterparts. To address these challenges, bioprinting has emerged as an enabling technology to create highly organized three-dimensional (3D) vascular networks within engineered tissue constructs to promote the transport of oxygen, nutrients, and waste products, which can hardly be realized using conventional microfabrication techniques. Here, we report the development of a versatile 3D bioprinting strategy that employs biomimetic biomaterials and an advanced extrusion system to deposit perfusable vascular structures with highly ordered arrangements in a single-step process. In particular, a specially designed cell-responsive bioink consisting of gelatin methacryloyl (GelMA), sodium alginate, and 4-arm poly(-ethylene glycol)-tetra-acrylate (PEGTA) was used in combination with a multilayered coaxial extrusion system to achieve direct 3D bioprinting. This blend bioink could be first ionically crosslinked by calcium ions followed by covalent photocrosslinking of GelMA and PEGTA to form stable constructs. The rheological properties of the bioink and the mechanical strengths of the resulting constructs were tuned by the introduction of PEGTA, which facilitated the precise deposition of complex multilayered 3D perfusable hollow tubes. This blend bioink also displayed favorable biological characteristics that supported the spreading and proliferation of encapsulated endothelial and stem cells in the bioprinted constructs, leading to the formation of biologically relevant, highly organized, perfusable vessels. These characteristics make this novel 3D bioprinting technique superior to conventional microfabrication or sacrificial templating approaches for fabrication of the perfusable vasculature. We envision that our advanced bioprinting technology and bioink formulation may also

  4. First direct 3D visualisation of microstructural evolutions during sintering through X-ray computed microtomography

    SciTech Connect

    Bernard, Dominique . E-mail: bernard@icmcb.u-bordeaux.fr; Gendron, Damien; Heintz, Jean-Marc; Bordere, Sylvie; Etourneau, Jean

    2005-01-03

    X-ray computed microtomography (XCMT) has been applied to ceramic samples of different materials to visualise, for the first time at this scale, real 3D microstructural evolutions during sintering. Using this technique, it has been possible to follow the whole sintering process of the same grains set. Two materials have been studied; a glass powder heat treated at 700 deg. C and a crystallised lithium borate (Li{sub 6}Gd(BO{sub 3}){sub 3}) powder heat treated at 720 deg. C. XCMT measurements have been done after different sintering times. For each material, a sub-volume was individualised and localised on the successive recordings and its 3D images numerically reconstructed. Description of the three-dimensional microstructures evolution is proposed. From the 3D experimental data, quantitative evolutions of parameters such as porosity and neck size are presented for the glass sample. Possibilities offered by this technique to study complex sintering processes, as for lithium borate, are illustrated.

  5. Numerical investigation of 3D effects on a 2D-dominated shocked mixing layer

    NASA Astrophysics Data System (ADS)

    Reese, Daniel; Weber, Christopher

    2016-11-01

    A nominally two-dimensional interface, unstable to the Rayleigh-Taylor or Richtmyer-Meshkov instability, will become three-dimensional at high Reynolds numbers due to the growth of background noise and 3D effects like vortex stretching. This three-dimensionality changes macroscopic features, such as the perturbation growth rate and mixing, as it enhances turbulent dissipation. In this study, a 2D perturbation with small-scale, 3D fluctuations is modeled using the hydrodynamics code Miranda. A Mach 1.95 shockwave accelerates a helium-over-SF6 interface, similar to the experiments of Motl et al. ["Experimental validation of a Richtmyer-Meshkov scaling law over large density ratio and shock strength ranges," Phys. Fluids 21(12), 126102 (2009)], to explore the regime where a 2D dominated flow will experience 3D effects. We report on the structure, growth, and mixing of the post-shocked interface in 2D and 3D.

  6. Imaging 3D geological structure of the Mygdonian basin (Northern Greece) with geological numerical modeling and geophysical methods.

    NASA Astrophysics Data System (ADS)

    Cédric, Guyonnet-Benaize; Fabrice, Hollender; Maria, Manakou; Alexandros, Savvaidis; Elena, Zargli; Cécile, Cornou; Nikolaos, Veranis; Dimitrios, Raptakis; Artemios, Atzemoglou; Pierre-Yves, Bard; Nikolaos, Theodulidis; Kyriazis, Pitilakis; Emmanuelle, Chaljub

    2013-04-01

    The Mygdonian basin, located 30 km E-NE close to Thessaloniki, is a typical active tectonic basin, trending E-NW, filled by sediments 200 to 400 m thick. This basin has been chosen as a European experimental site since 1993 (European Commission research projects - EUROSEISTEST). It has been investigated for experimental and theoretical studies on site effects. The Mygdonian basin is currently covered by a permanent seismological network and has been mainly characterized in 2D and 3D with geophysical and geotechnical studies (Bastani et al, 2011; Cadet and Savvaidis, 2011; Gurk et al, 2007; Manakou et al, 2007; Manakou et al, 2010; Pitilakis et al, 1999; Raptakis et al, 2000; Raptakis et al, 2005). All these studies allowed understanding the influence of geological structures and local site conditions on seismic site response. For these reasons, this site has been chosen for a verification exercise for numerical simulations in the framework of an ongoing international collaborative research project (Euroseistest Verification and Validation Project - E2VP). The verification phase has been made using a first 3D geophysical and geotechnical model (Manakou, 2007) about 5 km wide and 15 km long, centered on the Euroseistest site. After this verification phase, it has been decided to update, optimize and extend this model in order to obtain a more detailed model of the 3D geometry of the entire basin, especially the bedrock 3D geometry which can affect drastically the results of numerical simulations for site effect studies. In our study, we build a 3D geological model of the present-day structure of the entire Mygdonian basin. This "precise" model is 12 km wide, 65 km long and is 400 m deep in average. It has been built using geophysical, geotechnical and geological data. The database is heterogeneous and composed of hydrogeological boreholes, seismic refraction surveys, array microtremor measurements, electrical and geotechnical surveys. We propose an integrated

  7. Exploring Direct 3D Interaction for Full Horizontal Parallax Light Field Displays Using Leap Motion Controller

    PubMed Central

    Adhikarla, Vamsi Kiran; Sodnik, Jaka; Szolgay, Peter; Jakus, Grega

    2015-01-01

    This paper reports on the design and evaluation of direct 3D gesture interaction with a full horizontal parallax light field display. A light field display defines a visual scene using directional light beams emitted from multiple light sources as if they are emitted from scene points. Each scene point is rendered individually resulting in more realistic and accurate 3D visualization compared to other 3D displaying technologies. We propose an interaction setup combining the visualization of objects within the Field Of View (FOV) of a light field display and their selection through freehand gesture tracked by the Leap Motion Controller. The accuracy and usefulness of the proposed interaction setup was also evaluated in a user study with test subjects. The results of the study revealed high user preference for free hand interaction with light field display as well as relatively low cognitive demand of this technique. Further, our results also revealed some limitations and adjustments of the proposed setup to be addressed in future work. PMID:25875189

  8. A direct approach for instantaneous 3D density field reconstruction from background-oriented schlieren (BOS) measurements

    NASA Astrophysics Data System (ADS)

    Nicolas, F.; Todoroff, V.; Plyer, A.; Le Besnerais, G.; Donjat, D.; Micheli, F.; Champagnat, F.; Cornic, P.; Le Sant, Y.

    2016-01-01

    We present a new numerical method for reconstruction of instantaneous density volume from 3D background-oriented schlieren (3DBOS) measurements, with a validation on a dedicated flexible experimental BOS bench. In contrast to previous works, we use a direct formulation where density is estimated from measured deviation fields without the intermediate step of density gradient reconstruction. Regularization techniques are implemented to deal with the ill-posed problem encountered. The resulting high-dimensional optimization is conducted by conjugate gradient techniques. A parallel algorithm, implemented on graphics processing unit, helps to speed up the calculation. The resulting software is validated on synthetic BOS images of a 3D density field issued from a numerical simulation. Then, we describe a dedicated 3DBOS experimental facility which has been built to study various BOS settings and to assess the performance of the proposed numerical reconstruction process. Results on various datasets illustrate the potential of the method for flow characterization and measurement in real-world conditions.

  9. Development and New Directions for the RELAP5-3D Graphical Users Interface

    SciTech Connect

    Mesina, George Lee

    2001-09-01

    The direction of development for the RELAP5 Graphical User Interfaces (RGUI) has been extended. In addition to existing plans for displaying all aspects of RELAP5 calculations, the plan now includes plans to display the calculations of a variety of codes including SCDAP, RETRAN and FLUENT. Recent work has included such extensions along with the previously planned and user-requested improvements and extensions. Visualization of heat-structures has been added. Adaptations were made for another computer program, SCDAP-3D, including plant core views. An input model builder for generating RELAP5-3D input files was partially implemented. All these are reported. Plans for future work are also summarized. These include an input processor that transfers steady-state conditions into an input file.

  10. Propagation of an Earth-Directed Coronal Mass Ejection in 3D

    NASA Astrophysics Data System (ADS)

    Byrne, Jason; Gallagher, P. T.; Maloney, S. A.; McAteer, J.

    2010-05-01

    We have developed a new method to reconstruct the 3D evolution of a CME front using the Sun Earth Connection Coronal and Heliospheric Investigation (SECCHI) onboard the Solar Terrestrial Relations Observatory (STEREO). On 12 December 2008 an Earth-directed CME was observed by STEREO while the spacecraft were in near quadrature at 86.7 degrees separation. This positioning presents an ideal case for observing its propagation through the combined SECCHI instrument fields-of-view and applying our technique to reconstruct the CME front in 3D. The reconstruction allows us to determine the true CME front kinematics and morphology, and we measure three important dynamic effects at play: deflection from a high latitude source region; an increasing angular width; and interplanetary drag.

  11. Full-field 3D shape measurement of specular surfaces by direct phase to depth relationship

    NASA Astrophysics Data System (ADS)

    Zhang, Zonghua; Liu, Yue; Huang, Shujun; Niu, Zhenqi; Guo, Jiao; Gao, Nan; Gao, Feng; Jiang, Xiangqian

    2016-11-01

    This paper presents a new Phase Measuring Deflectometry (PMD) method to measure specular object having discontinuous surfaces. A mathematical model is established to directly relate absolute phase and depth, instead of phase and gradient. Based on the model, a hardware measuring system has been set up, which consists of a beam splitter to change the optical path, and two LCD screens to display the same sinusoidal fringe patterns. By using model-based and machine vision method, system calibration is accomplished to provide the required parameters and conditions. The verification tests are given to evaluate the effectiveness of the developed system. The 3D shape of an artificial step having multiple specular surfaces and a concave mirror has been measured. Initial experimental results show that the proposed measurement method can obtain 3D shape of specular objects with discontinuous surface effectively.

  12. 3D Numerical Study of Typical CME Event: The 2010-04-03 Event

    NASA Astrophysics Data System (ADS)

    Zhou, Y.; Feng, X. S.; Zhao, X.

    2014-12-01

    The coronal mass ejection (CME) event on April 3, 2010 is the first fast CME observed by STEREO SECCHI/HI for the full Sun-Earth line. Such an event provides us a good opportunity to study the propagation and evolution of CME from the Sun up to 1 AU. In this paper, we study the time-dependent evolution and propagation of this event from the Sun to Earth using the 3D SIP-CESE MHD model. The CME is initiated by a simple spherical plasmoid model: a spheromak magnetic structure with high speed, high pressure and high plasma density plasmoid. We find that the results can successfully reproduce the observations in the STEREO A/B COR1 and COR2 field of view and generate many basic structures of the in situ measurement: such as the similar curves of the plasma density and velocity, an increase in the magnetic field magnitude, the large-scale smooth magnetic field rotation and prolonged southward IMF (a well known source of magnetic storms). The MHD model gives the shock arrival time at Earth with an error of ˜ 1.5 hours. Finally, we analyze in detail the propagation velocity, the spread angle, the trajectory of CME. The speed of the CME rapidly increases from near the Sun, then decreases due to interaction with the solar wind ambient. The spread angle of the CME quickly increases due to lateral material expansion by the pressure gradients within the realistic solar wind background, then the expansion decreases with distance and ends until a pressure equilibrium is established. We also study the CME deflection and find that the CME almost does not deflects in the latitudinal and longitudinal direction during its propagation from the Sun to 1 AU.

  13. Illustrating Surface Shape in Volume Data via Principal Direction-Driven 3D Line Integral Convolution

    NASA Technical Reports Server (NTRS)

    Interrante, Victoria

    1997-01-01

    The three-dimensional shape and relative depth of a smoothly curving layered transparent surface may be communicated particularly effectively when the surface is artistically enhanced with sparsely distributed opaque detail. This paper describes how the set of principal directions and principal curvatures specified by local geometric operators can be understood to define a natural 'flow' over the surface of an object, and can be used to guide the placement of the lines of a stroke texture that seeks to represent 3D shape information in a perceptually intuitive way. The driving application for this work is the visualization of layered isovalue surfaces in volume data, where the particular identity of an individual surface is not generally known a priori and observers will typically wish to view a variety of different level surfaces from the same distribution, superimposed over underlying opaque structures. By advecting an evenly distributed set of tiny opaque particles, and the empty space between them, via 3D line integral convolution through the vector field defined by the principal directions and principal curvatures of the level surfaces passing through each gridpoint of a 3D volume, it is possible to generate a single scan-converted solid stroke texture that may intuitively represent the essential shape information of any level surface in the volume. To generate longer strokes over more highly curved areas, where the directional information is both most stable and most relevant, and to simultaneously downplay the visual impact of directional information in the flatter regions, one may dynamically redefine the length of the filter kernel according to the magnitude of the maximum principal curvature of the level surface at the point around which it is applied.

  14. Selectivity of seismic electric signal (SES) of the 2000 Izu earthquake swarm: a 3D FEM numerical simulation model.

    PubMed

    Huang, Qinghua; Lin, Yufeng

    2010-01-01

    Although seismic electric signal (SES) has been used for short-term prediction of earthquakes, selectivity of SES still remains as one of the mysterious features. As a case study, we made a numerical simulation based on a 3D finite element method (FEM) on the selectivity of SES observed in the case of the 2000 Izu earthquake swarm. Our numerical results indicated that the existence of conductive channel under Niijima island could explain the reported SES selectivity.

  15. Multigrid preconditioned conjugate gradients for the numerical simulation of groundwater flow on the Cray T3D

    SciTech Connect

    Ashby, S.F.; Falgout, R.D.; Smith, S.G.; Fogwell, T.W.

    1994-09-01

    This paper discusses the numerical simulation of groundwater flow through heterogeneous porous media. The focus is on the performance of a parallel multigrid preconditioner for accelerating convergence of conjugate gradients, which is used to compute the hydraulic pressure head. The numerical investigation considers the effects of enlarging the domain, increasing the grid resolution, and varying the geostatistical parameters used to define the subsurface realization. The results were obtained using the PARFLOW groundwater flow simulator on the Cray T3D massively parallel computer.

  16. Numerical non-LTE 3D radiative transfer using a multigrid method

    NASA Astrophysics Data System (ADS)

    Bjørgen, Johan P.; Leenaarts, Jorrit

    2017-03-01

    Context. 3D non-LTE radiative transfer problems are computationally demanding, and this sets limits on the size of the problems that can be solved. So far, multilevel accelerated lambda iteration (MALI) has been the method of choice to perform high-resolution computations in multidimensional problems. The disadvantage of MALI is that its computing time scales as O(n2), with n the number of grid points. When the grid becomes finer, the computational cost increases quadratically. Aims: We aim to develop a 3D non-LTE radiative transfer code that is more efficient than MALI. Methods: We implement a non-linear multigrid, fast approximation storage scheme, into the existing Multi3D radiative transfer code. We verify our multigrid implementation by comparing with MALI computations. We show that multigrid can be employed in realistic problems with snapshots from 3D radiative magnetohydrodynamics (MHD) simulations as input atmospheres. Results: With multigrid, we obtain a factor 3.3-4.5 speed-up compared to MALI. With full-multigrid, the speed-up increases to a factor 6. The speed-up is expected to increase for input atmospheres with more grid points and finer grid spacing. Conclusions: Solving 3D non-LTE radiative transfer problems using non-linear multigrid methods can be applied to realistic atmospheres with a substantial increase in speed.

  17. Flow above and within granular media composed of spherical and non-spherical particles - using a 3D numerical model

    NASA Astrophysics Data System (ADS)

    Bartzke, Gerhard; Kuhlmann, Jannis; Huhn, Katrin

    2016-04-01

    The entrainment of single grains and, hence, their erosion characteristics are dependent on fluid forcing, grain size and density, but also shape variations. To quantitatively describe and capture the hydrodynamic conditions around individual grains, researchers commonly use empirical approaches such as laboratory flume tanks. Nonetheless, it is difficult with such physical experiments to measure the flow velocities in the direct vicinity or within the pore spaces of sediments, at a sufficient resolution and in a non-invasive way. As a result, the hydrodynamic conditions in the water column, at the fluid-porous interface and within pore spaces of a granular medium of various grain shapes is not yet fully understood. For that reason, there is a strong need for numerical models, since these are capable of quantifying fluid speeds within a granular medium. A 3D-SPH (Smooth Particle Hydrodynamics) numerical wave tank model was set up to provide quantitative evidence on the flow velocities in the direct vicinity and in the interior of granular beds composed of two shapes as a complementary method to the difficult task of in situ measurement. On the basis of previous successful numerical wave tank models with SPH, the model geometry was chosen in dimensions of X=2.68 [m], Y=0.48 [m], and Z=0.8 [m]. Three suites of experiments were designed with a range of particle shape models: (1) ellipsoids with the long axis oriented in the across-stream direction, (2) ellipsoids with the long axis oriented in the along-stream direction, and (3) spheres. Particle diameters ranged from 0.04 [m] to 0.08 [m]. A wave was introduced by a vertical paddle that accelerated to 0.8 [m/s] perpendicular to the granular bed. Flow measurements showed that the flow velocity values into the beds were highest when the grains were oriented across the stream direction and lowest in case when the grains were oriented parallel to the stream, indicating that the model was capable to simulate simultaneously

  18. Polymer optical fibers integrated directly into 3D orthogonal woven composites for sensing

    NASA Astrophysics Data System (ADS)

    Hamouda, Tamer; Seyam, Abdel-Fattah M.; Peters, Kara

    2015-02-01

    This study demonstrates that standard polymer optical fibers (POF) can be directly integrated into composites from 3D orthogonal woven preforms during the weaving process and then serve as in-situ sensors to detect damage due to bending or impact loads. Different composite samples with embedded POF were fabricated of 3D orthogonal woven composites with different parameters namely number of y-/x-layers and x-yarn density. The signal of POF was not affected significantly by the preform structure. During application of resin using VARTM technique, significant drop in backscattering level was observed due to pressure caused by vacuum on the embedded POF. Measurements of POF signal while in the final composites after resin cure indicated that the backscattering level almost returned to the original level of un-embedded POF. The POF responded to application of bending and impact loads to the composite with a reduction in the backscattering level. The backscattering level almost returned back to its original level after removing the bending load until damage was present in the composite. Similar behavior occurred due to impact events. As the POF itself is used as the sensor and can be integrated throughout the composite, large sections of future 3D woven composite structures could be monitored without the need for specialized sensors or complex instrumentation.

  19. Estimation of line dimensions in 3D direct laser writing lithography

    NASA Astrophysics Data System (ADS)

    Guney, M. G.; Fedder, G. K.

    2016-10-01

    Two photon polymerization (TPP) based 3D direct laser writing (3D-DLW) finds application in a wide range of research areas ranging from photonic and mechanical metamaterials to micro-devices. Most common structures are either single lines or formed by a set of interconnected lines as in the case of crystals. In order to increase the fidelity of these structures and reach the ultimate resolution, the laser power and scan speed used in the writing process should be chosen carefully. However, the optimization of these writing parameters is an iterative and time consuming process in the absence of a model for the estimation of line dimensions. To this end, we report a semi-empirical analytic model through simulations and fitting, and demonstrate that it can be used for estimating the line dimensions mostly within one standard deviation of the average values over a wide range of laser power and scan speed combinations. The model delimits the trend in onset of micro-explosions in the photoresist due to over-exposure and of low degree of conversion due to under-exposure. The model guides setting of high-fidelity and robust writing parameters of a photonic crystal structure without iteration and in close agreement with the estimated line dimensions. The proposed methodology is generalizable by adapting the model coefficients to any 3D-DLW setup and corresponding photoresist as a means to estimate the line dimensions for tuning the writing parameters.

  20. Direct 3D-printing of cell-laden constructs in microfluidic architectures.

    PubMed

    Liu, Justin; Hwang, Henry H; Wang, Pengrui; Whang, Grace; Chen, Shaochen

    2016-04-21

    Microfluidic platforms have greatly benefited the biological and medical fields, however standard practices require a high cost of entry in terms of time and energy. The utilization of three-dimensional (3D) printing technologies has greatly enhanced the ability to iterate and build functional devices with unique functions. However, their inability to fabricate within microfluidic devices greatly increases the cost of producing several different devices to examine different scientific questions. In this work, a variable height micromixer (VHM) is fabricated using projection 3D-printing combined with soft lithography. Theoretical and flow experiments demonstrate that altering the local z-heights of VHM improved mixing at lower flow rates than simple geometries. Mixing of two fluids occurs as low as 320 μL min(-1) in VHM whereas the planar zigzag region requires a flow rate of 2.4 mL min(-1) before full mixing occurred. Following device printing, to further demonstrate the ability of this projection-based method, complex, user-defined cell-laden scaffolds are directly printed inside the VHM. The utilization of this unique ability to produce 3D tissue models within a microfluidic system could offer a unique platform for medical diagnostics and disease modeling.

  1. Numerical Investigation of 3D multichannel analysis of surface wave method

    NASA Astrophysics Data System (ADS)

    Wang, Limin; Xu, Yixian; Luo, Yinhe

    2015-08-01

    Multichannel analysis of surface wave (MASW) method is an efficient tool to obtain near-surface S-wave velocity, and it has gained popularity in engineering practice. Up to now, most examples of using the MASW technique are focused on 2D models or data from a 1D linear receiver spread. We propose a 3D MASW scheme. A finite-difference (FD) method is used to investigate the method using linear and fan-shaped receiver spreads. Results show that the 3D topography strongly affects propagation of Rayleigh waves. The energy concentration of dispersion image is distorted and bifurcated because of the influence of free-surface topography. These effects are reduced with the 3D MASW method. Lastly we investigate the relation between the array size and the resolution of dispersion measurement.

  2. Numerical study of the 3-D effect on FEL performance and its application to the APS LEUTL FEL

    SciTech Connect

    Chae, Y.C.

    1998-09-01

    A Low-Energy Undulator Test Line (LEUTL) is under construction at the Advanced Photon Source (APS). In LEUTL periodic focusing is provided by external quadrupoles. This results in an elliptical beam with its betatron oscillation envelope varying along the undulators. The free-electron laser (FEL) interaction with such a beam will exhibit truly 3-D effects. Thus the investigation of 3-D effects is important in optimizing the FEL performance. The programs GINGER and TDA3D, coupled with theoretically known facts, have been used for this purpose. Both programs are fully 3-D in moving the particle, but model the interaction between particles and axially symmetric electromagnetic waves. Even though TDA3D can include a few azimuthal modes in the interaction, it is still not a fully 3-D FEL code. However, they show that these 2-D programs can still be used for an elliptical beam whose aspect ratio is within certain limits. The author presents numerical results of FEL performance for the circular beam, the elliptical beam, and finally for the beam in the realistic LEUTL lattice.

  3. Femtosecond pulsed light polarization induced effects in direct laser writing 3D nanolithography

    NASA Astrophysics Data System (ADS)

    Malinauskas, Mangirdas; RekštytÄ--, Sima; Jonavičius, Tomas; Gailevičius, Darius; Mizeikis, Vygantas; Gamaly, Eugene; Juodkazis, Saulius

    2016-03-01

    We demonstrate how the coupling between (i) polarization of the writing laser beam, (ii) tight focusing and (iii) heat conduction affects the size, shape and absorption in the laser-affected area and therefore the polymerization process. It is possible to control the sizes of 3D laser-produced structure at the scale of several nanometers. Specifically we were able to tune the aspect ratio of 3D suspended line up to 20% in hybrid SZ2080 resist. The focal spot of tightly focused linearly polarized beam has an elliptical form with the long axis in the field direction. It is shown here that this effect is enhanced by increase in the electronic heat conduction when polarization coincide with temperature gradient along with the absorption. Overlapping of three effects (i- iii) results in the difference of several tens of nanometers between two axes of the focal ellipse. Narrow line appears when polarization and scan direction coincide, while the wide line is produced when these directions are perpendicular to each other. The effect scales with the laser intensity giving a possibility to control the width of the structure on nanometer scale as demonstrated experimentally in this work. These effects are of general nature and can be observed in any laser-matter interaction experiments where plasma produced by using tight focusing of linear-polarized light.

  4. Highly directional bottom-up 3D nanoantenna for visible light.

    PubMed

    Tong, L; Pakizeh, T; Feuz, L; Dmitriev, A

    2013-01-01

    Controlling light at the nanoscale is of fundamental importance and is essential for applications ranging from optical sensing and metrology to information processing, communications, and quantum optics. Considerable efforts are currently directed towards optical nanoantennas that directionally convert light into strongly localized energy and vice versa. Here we present highly directional 3D nanoantenna operating with visible light. We demonstrate a simple bottom-up approach to produce macroscopic arrays of such nanoantennas and present a way to address their functionality via interaction with quantum dots (QDs), properly embedded in the structure of the nanoantenna. The ease and accessibility of this structurally robust optical antenna device prompts its use as an affordable test bed for concepts in nano-optics and nanophotonics applications.

  5. Computer numerical control (CNC) lithography: light-motion synchronized UV-LED lithography for 3D microfabrication

    NASA Astrophysics Data System (ADS)

    Kim, Jungkwun; Yoon, Yong-Kyu; Allen, Mark G.

    2016-03-01

    This paper presents a computer-numerical-controlled ultraviolet light-emitting diode (CNC UV-LED) lithography scheme for three-dimensional (3D) microfabrication. The CNC lithography scheme utilizes sequential multi-angled UV light exposures along with a synchronized switchable UV light source to create arbitrary 3D light traces, which are transferred into the photosensitive resist. The system comprises a switchable, movable UV-LED array as a light source, a motorized tilt-rotational sample holder, and a computer-control unit. System operation is such that the tilt-rotational sample holder moves in a pre-programmed routine, and the UV-LED is illuminated only at desired positions of the sample holder during the desired time period, enabling the formation of complex 3D microstructures. This facilitates easy fabrication of complex 3D structures, which otherwise would have required multiple manual exposure steps as in the previous multidirectional 3D UV lithography approach. Since it is batch processed, processing time is far less than that of the 3D printing approach at the expense of some reduction in the degree of achievable 3D structure complexity. In order to produce uniform light intensity from the arrayed LED light source, the UV-LED array stage has been kept rotating during exposure. UV-LED 3D fabrication capability was demonstrated through a plurality of complex structures such as V-shaped micropillars, micropanels, a micro-‘hi’ structure, a micro-‘cat’s claw,’ a micro-‘horn,’ a micro-‘calla lily,’ a micro-‘cowboy’s hat,’ and a micro-‘table napkin’ array.

  6. Some Methods of Applied Numerical Analysis to 3d Facial Reconstruction Software

    NASA Astrophysics Data System (ADS)

    Roşu, Şerban; Ianeş, Emilia; Roşu, Doina

    2010-09-01

    This paper deals with the collective work performed by medical doctors from the University Of Medicine and Pharmacy Timisoara and engineers from the Politechnical Institute Timisoara in the effort to create the first Romanian 3d reconstruction software based on CT or MRI scans and to test the created software in clinical practice.

  7. Numerical simulation of 3D boundary-driven acoustic streaming in microfluidic devices.

    PubMed

    Lei, Junjun; Hill, Martyn; Glynne-Jones, Peter

    2014-02-07

    This article discusses three-dimensional (3D) boundary-driven streaming in acoustofluidic devices. Firstly, the 3D Rayleigh streaming pattern in a microchannel is simulated and its effect on the movement of microparticles of various sizes is demonstrated. The results obtained from this model show good comparisons with 3D experimental visualisations and demonstrate the fully 3D nature of the acoustic streaming field and the associated acoustophoretic motion of microparticles in acoustofluidic devices. This method is then applied to another acoustofluidic device in order to gain insights into an unusual in-plane streaming pattern. The origin of this streaming has not been fully described and its characteristics cannot be explained from the classical theory of Rayleigh streaming. The simulated in-plane streaming pattern was in good agreement with the experimental visualisation. The mechanism behind it is shown to be related to the active sound intensity field, which supports our previous findings on the mechanism of the in-plane acoustic streaming pattern visualised and modelled in a thin-layered capillary device.

  8. A 3-D numerical study of pinhole diffraction to predict the accuracy of EUV point diffraction interferometry

    SciTech Connect

    Goldberg, K.A. |; Tejnil, E.; Bokor, J. |

    1995-12-01

    A 3-D electromagnetic field simulation is used to model the propagation of extreme ultraviolet (EUV), 13-nm, light through sub-1500 {Angstrom} dia pinholes in a highly absorptive medium. Deviations of the diffracted wavefront phase from an ideal sphere are studied within 0.1 numerical aperture, to predict the accuracy of EUV point diffraction interferometersused in at-wavelength testing of nearly diffraction-limited EUV optical systems. Aberration magnitudes are studied for various 3-D pinhole models, including cylindrical and conical pinhole bores.

  9. In vivo bone response to 3D periodic hydroxyapatite scaffolds assembled by direct ink writing.

    PubMed

    Simon, Joshua L; Michna, Sarah; Lewis, Jennifer A; Rekow, E Dianne; Thompson, Van P; Smay, James E; Yampolsky, Andrew; Parsons, J Russell; Ricci, John L

    2007-12-01

    The in vivo bone response of 3D periodic hydroxyapatite (HA) scaffolds is investigated. Two groups of HA scaffolds (11 mm diameter x 3.5 mm thick) are fabricated by direct-write assembly of a concentrated HA ink. The scaffolds consist of cylindrical rods periodically arranged into four quadrants with varying separation distances between rods. In the first group, HA rods (250 microm in diameter) are patterned to create pore channels, whose areal dimensions are 250 x 250 microm(2) in quadrant 1, 250 x 500 microm(2) in quadrants 2 and 4, and 500 x 500 microm(2) in quadrant 3. In the second group, HA rods (400 microm in diameter) are patterned to create pore channels, whose areal dimensions of 500 x 500 microm(2) in quadrant 1, 500 x 750 microm(2) in quadrants 2 and 4, and 750 x 750 microm(2) in quadrant 3. Each group of scaffolds is partially densified by sintering at 1200 degrees C prior to being implanted bilaterally in trephine defects of skeletally mature New Zealand White rabbits. Their tissue response is evaluated at 8 and 16 weeks using micro-computed tomography, histology, and scanning electron microscopy. New trabecular bone is conducted rapidly and efficiently across substantial distances within these patterned 3D HA scaffolds. Our observations suggest that HA rods are first coated with a layer of new bone followed by subsequent scaffold infilling via outward and inward radial growth of the coated regions. Direct-write assembly of 3D periodic scaffolds composed of micro-porous HA rods arrayed to produce macro-pores that are size-matched to trabecular bone may represent an optimal strategy for bone repair and replacement structures.

  10. 3D numerical simulations of dense water cascading in an idealised laboratory setting

    NASA Astrophysics Data System (ADS)

    Wobus, F.; Shapiro, G. I.; Maqueda, M. A. M.; Huthnance, J. M.

    2012-04-01

    The sinking of dense waters flowing from shelf seas down the continental slope "cascading" contributes to ocean ventilation and water mass formation (notably in the Antarctic) and hence ocean circulation. It is also deemed to affect carbon cycling by providing an efficient mechanism of export of carbon-rich surface waters to a greater depth thus contributing to the "carbon pump". Cascading occurs where dense water - formed by cooling, evaporation or ice-formation with brine rejection over the shallow continental shelf - spills over the shelf edge and descends the continental slope as a near-bottom gravity current. During its descent, the plume is modified by mixing and entrainment, and detaches off the slope when reaching its neutral buoyancy level. Cascading over steep bottom topography is studied here in numerical experiments using POLCOMS, a 3D ocean circulation model which utilizes a terrain-following s-coordinate system (Wobus et al, 2011). The model setup is based on a previously conducted (Shapiro and Zatsepin, 1997) laboratory experiment of a continuous dense water flow from a central source on a conical slope in a rotating tank. The governing parameters of the experiments are the density difference between plume and ambient water, the flow rate, the speed of rotation and (in the model) diffusivity and viscosity. The descent of the dense flow as characterised by the length of the plume as a function of time is studied for a range of physical and model parameters. Very good agreement between the model and the laboratory results is shown in dimensional and non-dimensional variables. It is confirmed that a hydrostatic model is capable of reproducing the essential physics of cascading on a very steep slope if the model correctly resolves velocity veering in the bottom boundary layer. Experiments changing the height of the bottom Ekman layer (by changing viscosity) and modifying the plume from a 2-layer system to a stratified regime (by enhancing diapycnal

  11. 3-D Numerical Modeling of Rupture Sequences of Large Shallow Subduction Earthquakes

    NASA Astrophysics Data System (ADS)

    Liu, Y.; Rice, J. R.

    2003-12-01

    We study the rupture behavior of large earthquakes on a 3-D shallow subduction fault governed by a rate and state friction law, and loaded by imposed slip at rate Vpl far downdip along the thrust interface. Friction properties are temperature, and hence depth, dependent, so that sliding is stable ( a - b > 0) at depths below about 30 km. To perturb the system into a nonuniform slip mode, if such a solution exists, we introduce small along-strike variations in either the constitutive parameters a and (a - b), or the effective normal stress, or the initial conditions. Our results do show complex, nonuniform slip behavior over the thousands of simulation years. Large events of multiple magnitudes occur at various along-strike locations, with different recurrence intervals, like those of natural interplate earthquakes. In the model, a large event usually nucleates in a less well locked gap region (slipping at order of 0.1 to 1 times the plate convergence rate Vpl) between more firmly locked regions (slipping at 10-4 to 10-2 Vpl) which coincide with the rupture zones of previous large events. It then propagates in both the dip and strike directions. Along-strike propagation slows down as the rupture front encounters neighboring locked zones, whose sizes and locking extents affect further propagation. Different propagation speeds at two fronts results in an asymmetric coseismic slip distribution, as is consistent with the slip inversion results of some large subduction earthquakes [e.g., Chlieh et al., 2003]. Current grid resolution is dictated by limitations of available computers and algorithms, and forces us to use constitutive length scales that are much larger than realistic lab values; that causes nucleation sizes to be in the several kilometers (rather than several meters) range. Thus there is a tentativeness to present conclusions. But with current resolution, we observe that the heterogeneous slip at seismogenic depths (i.e., where a - b < 0 ) is sometimes

  12. Directed Self-Assembly of Block Copolymers in 3D Templates Fabricated by Multiphoton Lithography

    NASA Astrophysics Data System (ADS)

    Singer, Jonathan; Thomas, Edwin

    2012-02-01

    Confinement of block-copolymers (BCP) within physical templates has been used as a method to both enhance the microdomain order and manipulate the morphology. Previous investigations have focused on 1D or quasi-2D templates (e.g. trenches, cylindrical pores) patterned at a variety of length scales. We have sought to employ the nearly-arbitrary structural fabrication afforded by multiphoton direct write lithography (MPL) to extend these stereolithographic control techniques to 3D directed assembly. Complex architectures, for example those formed by large scale lithographic techniques such as interference lithography or self-assembly, can be broken down into simplifier component structures: e.g. multibranch junctions, bends, and symmetric or asymmetric connecting pores. By utilizing MPL, we can fabricate model geometries possessing these features written in photoresist at various scales. We then infiltrate these structures with PS-PDMS BCP and observe the resulting morphology by SEM from focused ion beam cross-sections, allowing development of design rules that may be applied towards progressively more complex templates and the fabrication of 3D hierarchical structures with highly ordered and novel domain features spanning from the micron to the 10 nm scale.

  13. Colloidal and polyelectrolyte inks for direct-write assembly of 3D periodic structures

    NASA Astrophysics Data System (ADS)

    Gratson, Gregory Michael

    Novel inks were developed for the direct-write assembly of 3D periodic structures with varying feature size. Specifically, two ink designs were pursued: (1) a model colloidal ink (feature size > 100 mum) and (2) a polyelectrolyte ink (feature size ˜ 1 mum). The rheological properties of both inks were specifically tailored for our direct-write assembly process, which involves ink deposition through a fine scale nozzle that is robotically controlled using a 3-axis stage. Central to this approach is the design of inks that are capable of flowing through deposition nozzles of varying size and then "setting" immediately to facilitate shape retention of the deposited features. In addition, the inks must contain a high solid volume fraction to minimize drying-induced shrinkage after assembly is complete. First, a model colloidal ink based on monodisperse silica microspheres was designed for 3D periodic structures. These colloidal inks suffer difficulties (e.g., nozzle clogging) when used to fabricate structures with feature sizes below ˜ 100 mum, so a different ink design was pursued based on polyelectrolyte complexes. These inks rapidly solidified upon deposition into an IPA/water coagulation reservoir, and the exact coagulation mechanism depended strongly on reservoir composition. The water/IPA ratio in the reservoir (83--88 % IPA) was carefully tailored to produce filaments that could maintain their shape while spanning unsupported regions in the structure, yet were flexible enough to adhere to the substrate or underlying layers. Several micro-periodic structures of varying design were fabricated, revealing the facile nature of our approach. 3D micro-periodic scaffolds were used to create photonic crystals with high refractive index contrast. Silica chemical vapor deposition was performed under ambient conditions to produce a thin inorganic layer around the polymer, which facilitated further high-temperature steps. The polymer was removed through burnout at 475

  14. A continuous flow microfluidic calorimeter: 3-D numerical modeling with aqueous reactants

    PubMed Central

    Sen, Mehmet A.; Kowalski, Gregory J.; Fiering, Jason; Larson, Dale

    2015-01-01

    A computational analysis of the reacting flow field, species diffusion and heat transfer processes with thermal boundary layer effects in a microchannel reactor with a coflow configuration was performed. Two parallel adjacent streams of aqueous reactants flow along a wide, shallow, enclosed channel in contact with a substrate, which is affixed to a temperature controlled plate. The Fluent computational fluid dynamics package solved the Navier–Stokes, mass transport and energy equations. The energy model, including the enthalpy of reaction as a nonuniform heat source, was validated by calculating the energy balance at several control volumes in the microchannel. Analysis reveals that the temperature is nearly uniform across the channel thickness, in the direction normal to the substrate surface; hence, measurements made by sensors at or near the surface are representative of the average temperature. Additionally, modeling the channel with a glass substrate and a silicone cover shows that heat transfer is predominantly due to the glass substrate. Finally, using the numerical results, we suggest that a microcalorimeter could be based on this configuration, and that temperature sensors such as optical nanohole array sensors could have sufficient spatial resolution to determine enthalpy of reaction. PMID:25937678

  15. Nonlinear Numerical Modeling of Shape Control in IGNITOR in the Presence of 3D Structures

    NASA Astrophysics Data System (ADS)

    Albanese, R.; Ambrosino, G.; de Tommasi, G.; Pironti, A.; Rubinacci, G.; Villone, F.; Ramogida, G.; Coppi, B.

    2014-10-01

    IGNITOR is a high field compact machine designed for the investigation of fusion burning plasmas at or close to ignition. The integrated plasma position, shape and current control plays an important role in its safe operation. The analysis of its behavior taking into account nonlinear and 3D effects can be of great interest for assessing its performances. In fact, the system was designed on the basis of an axisymmetric linearized model. To this purpose, we use a computational tool, called CarMa0NL, with the unprecedented capability of simultaneously considering three-dimensional effects of conductors surrounding the plasma and the inherent nonlinearity of the plasma behaviour itself, in the presence of the complex set of circuit equations describing the control system. Preliminary results already lead to the conclusion that the vertical position response is not much influenced by nonlinear and 3D effects, as the vertical stabilization controller is able to ``hide'' the differences in open-loop models. Here we assess the performance of the shape controller, by coupling the nonlinear plasma evolution in the presence of the 3D vessel with ports to the complex circuit dynamics simulating the integrated closed loop control system.

  16. Direct Manufacturing of CubeSat Using 3-D Digital Printer and Determination of its Mechanical Properties

    DTIC Science & Technology

    2010-12-01

    mechanical properties (i.e. strength and elastic modulus) of samples fabricated from a 3-D digital printer as a function of processing parameters (2) to...geometry is brought into the 3D printer software application and rotated for the desired build orientation. The software then slices horizontal build...Arlington, VA 22203-1714 Direct Manufacturing of CubeSat Using 3-D Digital Printer and Determination of Its Mechanical Properties

  17. Mesoscale 3D manufacturing: varying focusing conditions for efficient direct laser writing of polymers

    NASA Astrophysics Data System (ADS)

    Jonušauskas, Linas; Malinauskas, Mangirdas

    2014-05-01

    In this paper, we report a novel approach for efficient fabrication of mesoscale polymer 3D microstructures. It is implemented by direct laser writing varying exposure beam focusing conditions. By carefully optimizing the fabrication parameters (laser intensity, scanning velocity/exposure time, changing objective lens) complex 3D geometries of the microstructures can be obtained rapidly. Additionally, we demonstrate this without the use of the photoinitiator as photosensitizer doped in the pre-polymer material (SZ2080). At femtosecond pulsed irradiation ~TW/cm² intensities the localized free radical polymerization is achieved via avalanche induced bond braking. Such microstructures have unique biocompatibility and optical transparency as well as optical damage threshold value. By creating the bulk part of the structure using low-NA (0.45) objective and subsequently fabricating the fine features using oil immersion high-NA (1.4) objective the manufacturing time is reduced dramatically (30x is demonstrated). Using this two objective method a prototype of functional microdevice was produced: 80 and 85 µm diameter microfluidic tubes with the fine filter consisting of 4 µm period grating structure that has 400 nm wide threads, which corresponds to a feature precision aspect ratio of ~200. Therefore, such method has great potential as a polymer fabrication tool for mesoscale optical, photonic and biomedical applications as well as highly integrated 3D µ-systems. Furthermore, the proposed approach is not limited to lithography and can be implemented in a more general type of laser writing, such as inscription within transparent materials or substractive manufacturing by ablation.

  18. A simplified 3-D Navier-Stokes numerical model for landslide-tsunami: Application to the Gulf of Mexico

    NASA Astrophysics Data System (ADS)

    Horrillo, J.; Wood, A.; Kim, G.-B.; Parambath, A.

    2013-12-01

    A simplified three-dimensional Navier-Stokes (3-D NS) model for two fluids, water and landslide material (mudslide) is presented and validated with standard laboratory experiments. Dubbed TSUNAMI3D (Tsunami Solution Using Navier-Stokes Algorithm with Multiple Interfaces) is applied to a 3-D full-scale landslide scenario in the Gulf of Mexico (GOM), i.e., the East-Breaks underwater landslide. The simplified 3-D NS model is conceived to be computationally efficient for tsunami calculations. The simplification is derived from the large aspect ratio of the tsunami waves (wavelength/wave-height) and the selected computational grid that has a smaller aspect ratio. This allows us to assume a horizontal fluid surface in each individual cell containing the interface (air-water, air-mudslide, and water-mudslide). The tracking of fluid interfaces is based on the Volume of Fluid method and the surfaces are obtained by integrating the fluxes of each individual fluid cell along the water column. In the momentum equation, the pressure term is split into two components, hydrostatic and nonhydrostatic. The internal friction is solved in a simplified manner by adjusting the viscosity coefficient. Despite the simplification to get an efficient solution, the numerical results agree fairly well with standard landslide laboratory experiments required by the National Tsunami Hazard Mitigation Program for tsunami model validation. The numerical effect caused by using a sharp versus a diffusive water-mudslide interface for a full-scale landslide-tsunami scenario is also investigated. Observations from this experiment indicated that choosing a sharp or diffusive interface seems to have no remarkable effect at early stages of the tsunami wave propagation. Last, a large scale 3-D numerical simulation is carried out for the ancient GOM's East-Breaks landslide by using the simplified model to calculate the early stages of the tsunami wave propagation.

  19. A hybrid experimental-numerical technique for determining 3D velocity fields from planar 2D PIV data

    NASA Astrophysics Data System (ADS)

    Eden, A.; Sigurdson, M.; Mezić, I.; Meinhart, C. D.

    2016-09-01

    Knowledge of 3D, three component velocity fields is central to the understanding and development of effective microfluidic devices for lab-on-chip mixing applications. In this paper we present a hybrid experimental-numerical method for the generation of 3D flow information from 2D particle image velocimetry (PIV) experimental data and finite element simulations of an alternating current electrothermal (ACET) micromixer. A numerical least-squares optimization algorithm is applied to a theory-based 3D multiphysics simulation in conjunction with 2D PIV data to generate an improved estimation of the steady state velocity field. This 3D velocity field can be used to assess mixing phenomena more accurately than would be possible through simulation alone. Our technique can also be used to estimate uncertain quantities in experimental situations by fitting the gathered field data to a simulated physical model. The optimization algorithm reduced the root-mean-squared difference between the experimental and simulated velocity fields in the target region by more than a factor of 4, resulting in an average error less than 12% of the average velocity magnitude.

  20. Numerical simulation of turbulent heat transfer past a backward-facing step: 2D/3D RANS versus IDDES solutions

    NASA Astrophysics Data System (ADS)

    Smirnov, E. M.; Smirnovsky, A. A.; Schur, N. A.; Zaitsev, D. K.; Smirnov, P. E.

    2016-09-01

    The contribution covers results of numerical study of air flow and heat transfer past a backward-facing step at the Reynolds number of 28,000. The numerical simulation was carried out under conditions of the experiments of Vogel&Eaton (1985), where nominally 2D fluid dynamics and heat transfer in a channel with expansion ratio of 1.25 was investigated. Two approaches were used for turbulence modelling. First, the Menter SST turbulence model was used to perform refined 2D and 3D RANS steady-state computations. The 3D analysis was undertaken to evaluate effects of boundary layers developing on the sidewalls of the experimental channel. Then, 3D time-dependent computations were carried out using the vortex-resolving IDDES method and applying the spanwise-periodicity conditions. Comparative computations were performed using an in-house finite-volume code SINF/Flag-S and the ANSYS Fluent. The codes produced practically identical RANS solutions, showing in particular a difference of 4% in the central-line peak Stanton number calculated in 2D and 3D cases. The IDDES results obtained with two codes are in a satisfactory agreement. Comparing with the experimental data, the IDDES produces the best agreement for the wall friction, whereas the RANS solutions show superiority in predictions of the local Stanton number distribution.

  1. 3D Numerical Modeling of the Propagation of Hydraulic Fracture at Its Intersection with Natural (Pre-existing) Fracture

    NASA Astrophysics Data System (ADS)

    Dehghan, Ali Naghi; Goshtasbi, Kamran; Ahangari, Kaveh; Jin, Yan; Bahmani, Aram

    2017-02-01

    A variety of 3D numerical models were developed based on hydraulic fracture experiments to simulate the propagation of hydraulic fracture at its intersection with natural (pre-existing) fracture. Since the interaction between hydraulic and pre-existing fractures is a key condition that causes complex fracture patterns, the extended finite element method was employed in ABAQUS software to simulate the problem. The propagation of hydraulic fracture in a fractured medium was modeled in two horizontal differential stresses (Δ σ) of 5e6 and 10e6 Pa considering different strike and dip angles of pre-existing fracture. The rate of energy release was calculated in the directions of hydraulic and pre-existing fractures (G_{{frac}} /G_{{rock}}) at their intersection point to determine the fracture behavior. Opening and crossing were two dominant fracture behaviors during the hydraulic and pre-existing fracture interaction at low and high differential stress conditions, respectively. The results of numerical studies were compared with those of experimental models, showing a good agreement between the two to validate the accuracy of the models. Besides the horizontal differential stress, strike and dip angles of the natural (pre-existing) fracture, the key finding of this research was the significant effect of the energy release rate on the propagation behavior of the hydraulic fracture. This effect was more prominent under the influence of strike and dip angles, as well as differential stress. The obtained results can be used to predict and interpret the generation of complex hydraulic fracture patterns in field conditions.

  2. 3D resistivity inversion using an improved Genetic Algorithm based on control method of mutation direction

    NASA Astrophysics Data System (ADS)

    Liu, B.; Li, S. C.; Nie, L. C.; Wang, J.; L, X.; Zhang, Q. S.

    2012-12-01

    Traditional inversion method is the most commonly used procedure for three-dimensional (3D) resistivity inversion, which usually takes the linearization of the problem and accomplish it by iterations. However, its accuracy is often dependent on the initial model, which can make the inversion trapped in local optima, even cause a bad result. Non-linear method is a feasible way to eliminate the dependence on the initial model. However, for large problems such as 3D resistivity inversion with inversion parameters exceeding a thousand, main challenges of non-linear method are premature and quite low search efficiency. To deal with these problems, we present an improved Genetic Algorithm (GA) method. In the improved GA method, smooth constraint and inequality constraint are both applied on the object function, by which the degree of non-uniqueness and ill-conditioning is decreased. Some measures are adopted from others by reference to maintain the diversity and stability of GA, e.g. real-coded method, and the adaptive adjustment of crossover and mutation probabilities. Then a generation method of approximately uniform initial population is proposed in this paper, with which uniformly distributed initial generation can be produced and the dependence on initial model can be eliminated. Further, a mutation direction control method is presented based on the joint algorithm, in which the linearization method is embedded in GA. The update vector produced by linearization method is used as mutation increment to maintain a better search direction compared with the traditional GA with non-controlled mutation operation. By this method, the mutation direction is optimized and the search efficiency is improved greatly. The performance of improved GA is evaluated by comparing with traditional inversion results in synthetic example or with drilling columnar sections in practical example. The synthetic and practical examples illustrate that with the improved GA method we can eliminate

  3. Programming Mechanical and Physicochemical Properties of 3D Hydrogel Cellular Microcultures via Direct Ink Writing.

    PubMed

    McCracken, Joselle M; Badea, Adina; Kandel, Mikhail E; Gladman, A Sydney; Wetzel, David J; Popescu, Gabriel; Lewis, Jennifer A; Nuzzo, Ralph G

    2016-05-01

    3D hydrogel scaffolds are widely used in cellular microcultures and tissue engineering. Using direct ink writing, microperiodic poly(2-hydroxyethyl-methacrylate) (pHEMA) scaffolds are created that are then printed, cured, and modified by absorbing 30 kDa protein poly-l-lysine (PLL) to render them biocompliant in model NIH/3T3 fibroblast and MC3T3-E1 preosteoblast cell cultures. Spatial light interference microscopy (SLIM) live cell imaging studies are carried out to quantify cellular motilities for each cell type, substrate, and surface treatment of interest. 3D scaffold mechanics is investigated using atomic force microscopy (AFM), while their absorption kinetics are determined by confocal fluorescence microscopy (CFM) for a series of hydrated hydrogel films prepared from prepolymers with different homopolymer-to-monomer (Mr ) ratios. The observations reveal that the inks with higher Mr values yield relatively more open-mesh gels due to a lower degree of entanglement. The biocompatibility of printed hydrogel scaffolds can be controlled by both PLL content and hydrogel mesh properties.

  4. Robotic extrusion processes for direct ink writing of 3D conductive polyaniline structures

    NASA Astrophysics Data System (ADS)

    Holness, F. Benjamin; Price, Aaron D.

    2016-04-01

    The intractable nature of intrinsically conductive polymers (ICP) leads to practical limitations in the fabrication of ICP-based transducers having complex three-dimensional geometries. Conventional ICP device fabrication processes have focused primarily on thin-film deposition techniques; therefore this study explores novel additive manufacturing processes specifically developed for ICP with the ultimate goal of increasing the functionality of ICP sensors and actuators. Herein we employ automated polymer paste extrusion processes for the direct ink writing of 3D conductive polyaniline (PANI) structures. Realization of these structures is enabled through a modified fused filament fabrication delta robot equipped with an integrated polymer paste extruder. This unique robot-controlled additive manufacturing platform is capable of fabricating high-resolution 3D conductive PANI and has been utilized to produce structures with a minimum feature size of 1.5 mm. The required processability of PANI is achieved by means of a counter-ion induced thermal doping method. Using this method, a viscous paste is formulated as the extrudate and a thermo-chemical treatment is applied post extrusion to finalize the complexation.

  5. Numerical Simulations of High-Frequency Respiratory Flows in 2D and 3D Lung Bifurcation Models

    NASA Astrophysics Data System (ADS)

    Chen, Zixi; Parameswaran, Shamini; Hu, Yingying; He, Zhaoming; Raj, Rishi; Parameswaran, Siva

    2014-07-01

    To better understand the human pulmonary system and optimize the high-frequency oscillatory ventilation (HFOV) design, numerical simulations were conducted under normal breathing frequency and HFOV condition using a CFD code Ansys Fluent and its user-defined C programs. 2D and 3D double bifurcating lung models were created, and the geometry corresponds to fifth to seventh generations of airways with the dimensions based on the Weibel's pulmonary model. Computations were carried out for different Reynolds numbers (Re = 400 and 1000) and Womersley numbers (α = 4 and 16) to study the air flow fields, gas transportation, and wall shear stresses in the lung airways. Flow structure was compared with experimental results. Both 2D and 3D numerical models successfully reproduced many results observed in the experiment. The oxygen concentration distribution in the lung model was investigated to analyze the influence of flow oscillation on gas transport inside the lung model.

  6. Numerical modeling of cutting processes for elastoplastic materials in 3D-statement

    NASA Astrophysics Data System (ADS)

    Kukudzhanov, V. N.; Levitin, A. L.

    2008-06-01

    In the present paper, we use the finite element method to perform the three-dimensional modeling of unsteady process of cutting an elastoplastic plate (slab) by an absolutely rigid cutting tool moving at a constant velocity V 0 at different inclinations α of the tool face (Fig. 1). The modeling was based on the coupled thermomechanical model of an elastoviscoplastic material. The adiabatic process of cutting was compared with the regime in which the slab material heat conduction is taken into account. The cutting process was parametrically studied for variations in the slab and cutting tool geometry, in the rate and depth of cutting, and in the properties of the processed material. The slab thickness was varied in the direction of the axis z. The stressed state varied from the plane-stressed bar H = H/L≪ 1 (thin plate) to the plane-strained bar H ≫ 1 (wide plate), where H is the slab thickness and L is the slab length. The problem was solved on a moving adaptive Lagrange-Euler grid by the finite element method with splitting, by using the explicit-implicit integration schemes for equations [13]. It was shown that the numerical modeling of the problem in the three-dimensional statement permits studying the cutting processes with continuous chip formation and with chip destruction into separate pieces. The mechanism of this phenomenon in the case of orthogonal cutting ( α = 0) can be explained by the thermal softening with formation of adiabatic shear strips without using the damage models. In cutting by a sharper tool (the angle α is large), it is necessary to use the coupled model of thermal and structural softening. We obtain dependences of the force acting on the tool for different geometric and physical parameters of the problem. We also show that the quasimonotone and oscillating operation modes are possible and explain them from the physical standpoint.

  7. Numerical simulation of a combined oxidation ditch flow using 3D k-epsilon turbulence model.

    PubMed

    Luo, Lin; Li, Wei-min; Deng, Yong-sen; Wang, Tao

    2005-01-01

    The standard three dimensional(3D) k-epsilon turbulence model was applied to simulate the flow field of a small scale combined oxidation ditch. The moving mesh approach was used to model the rotor of the ditch. Comparison of the computed and the measured data is acceptable. A vertical reverse flow zone in the ditch was found, and it played a very important role in the ditch flow behavior. The flow pattern in the ditch is discussed in detail, and approaches are suggested to improve the hydrodynamic performance in the ditch.

  8. 3D numerical thermal stress analysis of the high power target for the SLC Positron Source

    SciTech Connect

    Reuter, E.M.; Hodgson, J.A.

    1991-05-01

    The volumetrically nonuniform power deposition of the incident 33 GeV electron beam in the SLC Positron Source Target is hypothesized to be the most likely cause target failure. The resultant pulsed temperature distributions are known to generate complicated stress fields with no known closed-form analytical solution. 3D finite element analyses of these temperature distributions and associated thermal stress fields in the new High Power Target are described here. Operational guidelines based on the results of these analyses combined with assumptions made about the fatigue characteristics of the exotic target material are proposed. 6 refs., 4 figs.

  9. Modeling 3D conjugate heat and mass transfer for turbulent air drying of Chilean papaya in a direct contact dryer

    NASA Astrophysics Data System (ADS)

    Lemus-Mondaca, Roberto A.; Vega-Gálvez, Antonio; Zambra, Carlos E.; Moraga, Nelson O.

    2017-01-01

    A 3D model considering heat and mass transfer for food dehydration inside a direct contact dryer is studied. The k- ɛ model is used to describe turbulent air flow. The samples thermophysical properties as density, specific heat, and thermal conductivity are assumed to vary non-linearly with temperature. FVM, SIMPLE algorithm based on a FORTRAN code are used. Results unsteady velocity, temperature, moisture, kinetic energy and dissipation rate for the air flow are presented, whilst temperature and moisture values for the food also are presented. The validation procedure includes a comparison with experimental and numerical temperature and moisture content results obtained from experimental data, reaching a deviation 7-10 %. In addition, this turbulent k- ɛ model provided a better understanding of the transport phenomenon inside the dryer and sample.

  10. 3-D parallel program for numerical calculation of gas dynamics problems with heat conductivity on distributed memory computational systems (CS)

    SciTech Connect

    Sofronov, I.D.; Voronin, B.L.; Butnev, O.I.

    1997-12-31

    The aim of the work performed is to develop a 3D parallel program for numerical calculation of gas dynamics problem with heat conductivity on distributed memory computational systems (CS), satisfying the condition of numerical result independence from the number of processors involved. Two basically different approaches to the structure of massive parallel computations have been developed. The first approach uses the 3D data matrix decomposition reconstructed at temporal cycle and is a development of parallelization algorithms for multiprocessor CS with shareable memory. The second approach is based on using a 3D data matrix decomposition not reconstructed during a temporal cycle. The program was developed on 8-processor CS MP-3 made in VNIIEF and was adapted to a massive parallel CS Meiko-2 in LLNL by joint efforts of VNIIEF and LLNL staffs. A large number of numerical experiments has been carried out with different number of processors up to 256 and the efficiency of parallelization has been evaluated in dependence on processor number and their parameters.

  11. Ash3d: A finite-volume, conservative numerical model for ash transport and tephra deposition

    USGS Publications Warehouse

    Schwaiger, Hans F.; Denlinger, Roger P.; Mastin, Larry G.

    2012-01-01

    We develop a transient, 3-D Eulerian model (Ash3d) to predict airborne volcanic ash concentration and tephra deposition during volcanic eruptions. This model simulates downwind advection, turbulent diffusion, and settling of ash injected into the atmosphere by a volcanic eruption column. Ash advection is calculated using time-varying pre-existing wind data and a robust, high-order, finite-volume method. Our routine is mass-conservative and uses the coordinate system of the wind data, either a Cartesian system local to the volcano or a global spherical system for the Earth. Volcanic ash is specified with an arbitrary number of grain sizes, which affects the fall velocity, distribution and duration of transport. Above the source volcano, the vertical mass distribution with elevation is calculated using a Suzuki distribution for a given plume height, eruptive volume, and eruption duration. Multiple eruptions separated in time may be included in a single simulation. We test the model using analytical solutions for transport. Comparisons of the predicted and observed ash distributions for the 18 August 1992 eruption of Mt. Spurr in Alaska demonstrate to the efficacy and efficiency of the routine.

  12. Numerical 3D Hydrodynamics Study of Gravitational Instabilities in a Circumbinary Disk

    NASA Astrophysics Data System (ADS)

    Desai, Karna Mahadev; Steiman-Cameron, Thomas Y.; Michael, Scott; Cai, Kai; Durisen, Richard H.

    2016-01-01

    We present a 3D hydrodynamical study of gravitational instabilities (GIs) in a circumbinary protoplanetary disk around a Solar mass star and a brown dwarf companion (0.02 M⊙). GIs can play an important, and at times dominant, role in driving the structural evolution of protoplanetary disks. The reported simulations were performed employing CHYMERA, a radiative 3D hydrodynamics code developed by the Indiana University Hydrodynamics Group. The simulations include disk self-gravity and radiative cooling governed by realistic dust opacities. We examine the role of GIs in modulating the thermodynamic state of the disks, and determine the strengths of GI-induced density waves, non-axisymmetric density structures, radial mass transport, and gravitational torques. The principal goal of this study is to determine how the presence of the companion affects the nature and strength of GIs. Results are compared with a parallel simulation of a protoplanetary disk without the presence of the brown dwarf binary companion. We detect no fragmentation in either disk. A persistent vortex forms in the inner region of both disks. The vortex seems to be stabilized by the presence of the binary companion.

  13. A novel lithography process for 3D (three-dimensional) interconnect using an optical direct-writing exposure system

    NASA Astrophysics Data System (ADS)

    Azuma, T.; Sekiguchi, M.; Matsuo, M.; Kawasaki, A.; Hagiwara, K.; Matsui, H.; Kawamura, N.; Kishimoto, K.; Nakamura, A.; Washio, Y.

    2010-03-01

    A novel lithography process for 3D (Three-dimensional) interconnect was developed using an optical direct-writing exposure tool. A reflective IR (Infra-red) alignment system allows a direct detection of alignment marks both on front-side and back-side of wafer, and consequently allows feasible micro-fabrication for 3D interconnect using the reversed wafer. A combination of the optical direct-writing exposure tool of Dainippon Screen MFG. Co., Ltd. with the reflective IR alignment system and a high aspect chemically amplified resist of Tokyo Ohka Kogyo Co., Ltd. provides the lithography process exclusively for 12-inch wafer level 3D interconnect.

  14. In-chip fabrication of free-form 3D constructs for directed cell migration analysis.

    PubMed

    Olsen, Mark Holm; Hjortø, Gertrud Malene; Hansen, Morten; Met, Özcan; Svane, Inge Marie; Larsen, Niels B

    2013-12-21

    Free-form constructs with three-dimensional (3D) microporosity were fabricated by two-photon polymerization inside the closed microchannel of an injection-molded, commercially available polymer chip for analysis of directed cell migration. Acrylate constructs were produced as woodpile topologies with a range of pore sizes from 5 × 5 μm to 15 × 15 μm and prefilled with fibrillar collagen. Dendritic cells seeded into the polymer chip in a concentration gradient of the chemoattractant CCL21 efficiently negotiated the microporous maze structure for pore sizes of 8 × 8 μm or larger. The cells migrating through smaller pore sizes made significantly more turns than those through larger pores. The introduction of additional defined barriers in the microporous structure resulted in dendritic cells making more turns while still being able to follow the chemoattractant concentration gradient.

  15. Along-axis transition between narrow and wide rifts: Insights from 3D numerical experiments

    NASA Astrophysics Data System (ADS)

    Koptev, Alexander; Calais, Eric; Burov, Evgueni; Leroy, Sylvie; Gerya, Taras

    2016-04-01

    Based on performed high-resolution rheologically consistent three-dimensional thermo-mechanical numerical models, we show that there is a significant difference in the influence of the rheological profile on rifting style in the case of dominant active (plume-activated) rifting compared to dominant passive (far-field tectonic stresses) rifting. Narrow rifting, conventionally attributed to cold strong lithosphere in passive rifting mode, may develop in weak hot ultra-stretched lithosphere during active rifting, after plume impingement on a tectonically pre-stressed lithosphere. In that case, initially ultra-wide small-amplitude rift patterns focus, in a few Myr, in large-scale faults that form a narrow rift. Also, wide rifting may develop during ultra-slow spreading of strong lithosphere, and "switch" to the narrow rifting upon plume impingement. For further understanding the mechanisms behind the interactions between the mantle plume and far-field stresses in case of realistic horizontally heterogeneous lithosphere, we have tested our models on the case of the central East African Rift system (EARS). The EARS south of the Ethiopian Rift Valley bifurcates in two branches (eastern, magma-rich and western, magma-poor) surrounding the strong Tanzanian craton. Broad zones of low seismic velocity observed throughout the upper mantle beneath the central part of the EARS are consistent with the spreading of a deep mantle plume. The extensional features and topographic expression of the Eastern rift varies significantly north-southward: in northern Kenya the area of deformation is very wide (some 150-250 km in E-W direction), to the south the rift narrows to 60-70 km, yet further to the south this localized deformation widens again. Here we investigate this transition between localized and wide rifting using thermo-mechanical numerical modeling that couples, in a dynamic sense, the rise of the upper mantle material with the deformation of the African lithosphere below the

  16. Optically directed molecular transport and 3D isoelectric positioning of amphoteric biomolecules

    PubMed Central

    Hafeman, Dean G.; Harkins, James B.; Witkowski, Charles E.; Lewis, Nathan S.; Warmack, Robert J.; Brown, Gilbert M.; Thundat, Thomas

    2006-01-01

    We demonstrate the formation of charged molecular packets and their transport within optically created electrical force-field traps in a pH-buffered electrolyte. We call this process photoelectrophoretic localization and transport (PELT). The electrolyte is in contact with a photoconductive semiconductor electrode and a counterelectrode that are connected through an external circuit. A light beam directed to coordinates on the photoconductive electrode surface produces a photocurrent within the circuit and electrolyte. Within the electrolyte, the photocurrent creates localized force-field traps centered at the illuminated coordinates. Charged molecules, including polypeptides and proteins, electrophoretically accumulate into the traps and subsequently can be transported in the electrolyte by moving the traps over the photoconductive electrode in response to movement of the light beam. The molecules in a single trap can be divided into aliquots, and the aliquots can be directed along multiple routes simultaneously by using multiple light beams. This photoelectrophoretic transport of charged molecules by PELT resembles the electrostatic transport of electrons within force-field wells of solid-state charge-coupled devices. The molecules, however, travel in a liquid electrolyte rather than a solid. Furthermore, we have used PELT to position amphoteric biomolecules in three dimensions. A 3D pH gradient was created in an electrolyte medium by controlling the illumination position on a photoconductive anode where protons were generated electrolytically. Photoelectrophoretic transport of amphoteric molecules through the pH gradient resulted in accumulation of the molecules at their apparent 3D isoelectric coordinates in the medium. PMID:16618926

  17. Development of a Top-View Numeric Coding Teaching-Learning Trajectory within an Elementary Grades 3-D Visualization Design Research Project

    ERIC Educational Resources Information Center

    Sack, Jacqueline J.

    2013-01-01

    This article explicates the development of top-view numeric coding of 3-D cube structures within a design research project focused on 3-D visualization skills for elementary grades children. It describes children's conceptual development of 3-D cube structures using concrete models, conventional 2-D pictures and abstract top-view numeric…

  18. Parallel 3D Finite Element Numerical Modelling of DC Electron Guns

    SciTech Connect

    Prudencio, E.; Candel, A.; Ge, L.; Kabel, A.; Ko, K.; Lee, L.; Li, Z.; Ng, C.; Schussman, G.; /SLAC

    2008-02-04

    In this paper we present Gun3P, a parallel 3D finite element application that the Advanced Computations Department at the Stanford Linear Accelerator Center is developing for the analysis of beam formation in DC guns and beam transport in klystrons. Gun3P is targeted specially to complex geometries that cannot be described by 2D models and cannot be easily handled by finite difference discretizations. Its parallel capability allows simulations with more accuracy and less processing time than packages currently available. We present simulation results for the L-band Sheet Beam Klystron DC gun, in which case Gun3P is able to reduce simulation time from days to some hours.

  19. The numerical study of the cavitation-structure interaction around 3D flexible hydrofoil

    NASA Astrophysics Data System (ADS)

    Shi-liang, Hu; Ying, Chen; Chuan-jing, Lu

    2015-12-01

    The closely coupled approach combined the Finite Volume Method (FVM) solver and the Finite Element Method (FEM) solver is applied to simulation the cavitation-structure interaction of a 3D cantilevered flexible hydrofoil in water tunnel. In the cavitating flow, the elastic hydrofoil would deform or vibrate in bending and twisting mode. And the motion of the foil would affect the characteristics of the cavity and the hydrodynamic load on the foil in turn. With smaller cavitation numbers (σv=2.15), the frequency spectrum of the lift on the foil would contain two frequencies which are associated to the cavity shedding and the first bend frequency of the hydrofoil. With larger cavitation number (σv=2.55), the frequency of the lift is completely dominated by the natural frequency of the foil.

  20. A 3D Numerical Study of Gravitational Instabilities in Young Circumbinary Disks

    NASA Astrophysics Data System (ADS)

    Cai, Kai; Michael, Scott; Durisen, Richard

    2013-07-01

    Gravitational instabilities (GIs) in protoplanetary disks have been suggested as one of the major formation mechanisms of giant planets. Theoretical and computational studies have indicated that certain family of GIs can be excited in a circumbinary disk, which could lead to enhanced protoplanet formation (e.g., Sellwood & Lin 1989, Boss 2006). We have carried out a 3D simulation of a gravitationally unstable circumbinary disk around a young Sun-like star and a 0.02-Msun companion, both inside the central hole of the disk. Here we present a preliminary comparison between this simulation and a similarly simulated circumstellar disk around a solar-mass star but without the low-mass companion. The GIs stimulated by the binary and those that arise spontaneously are quite different in structure and strength. However, no fragmentation is observed, even after many orbital periods as measured in the outer disk.

  1. Delineation of the complement receptor type 2-C3d complex by site-directed mutagenesis and molecular docking.

    PubMed

    Shaw, Craig D; Storek, Michael J; Young, Kendra A; Kovacs, James M; Thurman, Joshua M; Holers, V Michael; Hannan, Jonathan P

    2010-12-10

    The interactions between the complement receptor type 2 (CR2) and the C3 complement fragments C3d, C3dg, and iC3b are essential for the initiation of a normal immune response. A crystal-derived structure of the two N-terminal short consensus repeat (SCR1-2) domains of CR2 in complex with C3d has previously been elucidated. However, a number of biochemical and biophysical studies targeting both CR2 and C3d appear to be in conflict with these structural data. Previous mutagenesis and heteronuclear NMR spectroscopy studies directed toward the C3d-binding site on CR2 have indicated that the CR2-C3d cocrystal structure may represent an encounter/intermediate or nonphysiological complex. With regard to the CR2-binding site on C3d, mutagenesis studies by Isenman and coworkers [Isenman, D. E., Leung, E., Mackay, J. D., Bagby, S. & van den Elsen, J. M. H. (2010). Mutational analyses reveal that the staphylococcal immune evasion molecule Sbi and complement receptor 2 (CR2) share overlapping contact residues on C3d: Implications for the controversy regarding the CR2/C3d cocrystal structure. J. Immunol. 184, 1946-1955] have implicated an electronegative "concave" surface on C3d in the binding process. This surface is discrete from the CR2-C3d interface identified in the crystal structure. We generated a total of 18 mutations targeting the two (X-ray crystallographic- and mutagenesis-based) proposed CR2 SCR1-2 binding sites on C3d. Using ELISA analyses, we were able to assess binding of mutant forms of C3d to CR2. Mutations directed toward the concave surface of C3d result in substantially compromised CR2 binding. By contrast, targeting the CR2-C3d interface identified in the cocrystal structure and the surrounding area results in significantly lower levels of disruption in binding. Molecular modeling approaches used to investigate disparities between the biochemical data and the X-ray structure of the CR2-C3d cocrystal result in highest-scoring solutions in which CR2 SCR1-2 is

  2. 3D numerical simulations of a LOVA reproduction inside the new facility STARDUST-UPGRADE

    NASA Astrophysics Data System (ADS)

    Ciparisse, J. F.; Malizia, A.; Poggi, L. A.; Tieri, F.; Gelfusa, M.; Murari, A.; Del Papa, C.; Giovannangeli, I.; Gaudio, P.

    2017-02-01

    A loss of vacuum in a vessel, containing or not dust, is the typical case study considered in the STARDUST-UPGRADE facility of the Quantum Electronics and Plasma Group of the university of Rome Tor Vergata. This kind of accident was simulated numerically, without including the presence of dust, for two mass flow rates and three different inlet ports (C, E and F). Numerical settings are explained and the results obtained in each case are shown and discussed. At the end of the work, conclusions about what seen and further foreseen developments of this research are presented.

  3. 3D Numerical modeling and its experimental verifications for an inhomogeneous head phantom using broadband fNIR system.

    PubMed

    Sultan, E; Pourrezaei, K; Ghandjbakhche, A; Daryoush, A S

    2014-03-01

    Modeling behavior of broadband (30-1000 MHz) frequency modulated near infrared photons through a multilayer phantom is of interest to optical bio-imaging research. Photon dynamics in phantom are predicted using three-dimension (3D) finite element numerical simulation and are related to the measured insertion loss and phase for a given human head geometry in this paper based on three layers of phantom each with distinct optical parameter properties. Simulation and experimental results are achieved for single, two, and three layers solid phantoms using COMSOL (COMSOL AB, Tegnérgatan 23, SE-111 40, Stockholm, Sweden) (for FEM) simulation and custom-designed broadband free space optical transmitter (Tx) and receiver (Rx) modules that are developed for photon migration at wavelengths of 680, 795, and 850 nm. Standard error is used to compute error between two-dimension and 3D FE modeling along with experimental results by fitting experimental data to the functional form of afrequency+b. Error results are shown at narrowband and broadband frequency modulation. Confidence in numerical modeling of the photonic behavior using 3D FEM for human head has been established here by comparing the reflection mode's experimental results with the predictions made by COMSOL for known commercial solid brain phantoms.

  4. A new 3D finite element model of the IEC 60318-1 artificial ear: II. Experimental and numerical validation

    NASA Astrophysics Data System (ADS)

    Bravo, Agustín; Barham, Richard; Ruiz, Mariano; López, Juan Manuel; De Arcas, Guillermo; Alonso, Jesus

    2012-12-01

    In part I, the feasibility of using three-dimensional (3D) finite elements (FEs) to model the acoustic behaviour of the IEC 60318-1 artificial ear was studied and the numerical approach compared with classical lumped elements modelling. It was shown that by using a more complex acoustic model that took account of thermo-viscous effects, geometric shapes and dimensions, it was possible to develop a realistic model. This model then had clear advantages in comparison with the models based on equivalent circuits using lumped parameters. In fact results from FE modelling produce a better understanding about the physical phenomena produced inside ear simulator couplers, facilitating spatial and temporal visualization of the sound fields produced. The objective of this study (part II) is to extend the investigation by validating the numerical calculations against measurements on an ear simulator conforming to IEC 60318-1. For this purpose, an appropriate commercially available device is taken and a complete 3D FE model developed for it. The numerical model is based on key dimensional data obtained with a non-destructive x-ray inspection technique. Measurements of the acoustic transfer impedance have been carried out on the same device at a national measurement institute using the method embodied in IEC 60318-1. Having accounted for the actual device dimensions, the thermo-viscous effects inside narrow slots and holes and environmental conditions, the results of the numerical modelling were found to be in good agreement with the measured values.

  5. PFLOW: A 3-D Numerical Modeling Tool for Calculating Fluid-Pressure Diffusion from Coulomb Strain

    NASA Astrophysics Data System (ADS)

    Wolf, L. W.; Lee, M.; Meir, A.; Dyer, G.; Ma, K.; Chan, C.

    2009-12-01

    A new 3D time-dependent pore-pressure diffusion model PFLOW is developed to investigate the response of pore fluids to the crustal deformation generated by strong earthquakes in heterogeneous geologic media. Given crustal strain generated by changes in Coulomb stress, this MATLAB-based code uses Skempton's coefficient to calculate resulting changes fluid pressure. Pore-pressure diffusion can be tracked over time in a user-defined model space with user-prescribed Neumann or Dirchilet boundary conditions and with spatially variable values of permeability. PFLOW employs linear or quadratic finite elements for spatial discretization and first order or second order, explicit or implicit finite difference discretization in time. PFLOW is easily interfaced with output from deformation modeling programs such as Coulomb (Toda et al., 2007) or 3D-DEF (Gomberg and Ellis, 1994). The code is useful for investigating to first-order the evolution of pore pressure changes induced by changes in Coulomb stress and their possible relation to water-level changes in wells or changes in stream discharge. It can also be used for student research and classroom instruction. As an example application, we calculate the coseismic pore pressure changes and diffusion induced by volumetric strain associated with the 1999 Chi-Chi earthquake (Mw = 7.6) in Taiwan. The Chi-Chi earthquake provides an unique opportunity to investigate the spatial and time-dependent poroelastic response of near-field rocks and sediments because there exist extensive observational data of water-level changes and crustal deformation. The integrated model allows us to explore whether changes in Coulomb stress can adequately explain hydrologic anomalies observed in areas such as Taiwan’s western foothills and the Choshui River alluvial plain. To calculate coseismic strain, we use the carefully calibrated finite fault-rupture model of Ma et al. (2005) and the deformation modeling code Coulomb 3.1 (Toda et al., 2007

  6. 3D numerical simulation of a lab-on-a-chip--increasing measurement sensitivity of interdigitated capacitors by passivation optimization.

    PubMed

    Jungreuthmayer, Christian; Birnbaumer, Gerald M; Zanghellini, Juergen; Ertl, Peter

    2011-04-07

    Interdigital electrode structures (IDES) play a major role in many technical and analytical applications. In particular, they are a key technology in modern lab-on-a-chip (LOC) devices. As high sensitivity is a key component of any (bio)analytical method, the presented work is aimed at designing a novel dielectric sensing system, which exhibits maximum sensor sensitivity using passivated dielectric microsensors. Although the implementation of high-ε(r) dielectric passivation materials such as tantalum oxide or titanium oxide showed increased sensor sensitivity by a factor of 5, simulations revealed that sensor sensitivity is ultimately determined by the dielectric properties of the analyte. Ideally, dielectric properties of the passivation material need to be adjusted to the dielectric properties of the material under investigation and any deviations (e.g. higher or lower dielectric constants) will result in significant loss of sensitivity. To address these shortcomings we have developed a novel dielectric sensing concept based on a dual-material passivation geometry. The novel design consists of electric flux barriers that are layered between the finger electrodes, as well as electric flux guides which are located above the electrode structures that direct the entire generated electric flux to the object under investigation. Our 3D numerical results clearly show that the novel design offers two main advantages: firstly, the measurement sensitivity is further increased by more than a factor of two in comparison to a homogeneous passivation material sensing strategy. Secondly, maximum sensitivity for a given set of finger geometries can be achieved using a single sensor design regardless of the frequency-dependent dielectric properties of the measured objects. Hence, the novel approach is capable of reducing design and manufacturing costs of lab-on-a-chip devices.

  7. Laser-assisted direct manufacturing of functionally graded 3D objects

    NASA Astrophysics Data System (ADS)

    Iakovlev, A.; Trunova, E.; Grevey, Dominique; Smurov, Igor

    2003-09-01

    Coaxial powder injection into a laser beam was applied for the laser-assisted direct manufacturing of 3D functionally graded (FG) objects. The powders of Stainless Steel 316L and Stellite grade 12 were applied. The following laser sources were used: (1) quasi-cw CO2 Rofin Sinar laser with 120 μm focal spot diameter and (2) pulsed-periodic Nd:YAG (HAAS HL 304P) with 200 μm focal spot diameter. The objects were fabricated layer-by-layer in the form of "walls", having the thickness of about 200 μm for CO2 laser and 300 μm for Nd:YAG laser. SEM analysis was applied for the FG objects fabricated by CO2 laser, yielding wall elements distribution in vertical direction. It was found that microhardness distribution is fully correlated with the components distribution. The compositional gradient can be smooth or sharp. Periodic multi-layered structures can be obtained as well. Minimal thickness of a layer with the fixed composition (for cw CO2 laser) is about 50 μm. Minimal thickness of a graded material zone, i.e. zone with composition variation from pure stainless steel to pure stellite is about 30 μm.

  8. Spent Fuel Ratio Estimates from Numerical Models in ALE3D

    SciTech Connect

    Margraf, J. D.; Dunn, T. A.

    2016-08-02

    Potential threat of intentional sabotage of spent nuclear fuel storage facilities is of significant importance to national security. Paramount is the study of focused energy attacks on these materials and the potential release of aerosolized hazardous particulates into the environment. Depleted uranium oxide (DUO2) is often chosen as a surrogate material for testing due to the unreasonable cost and safety demands for conducting full-scale tests with real spent nuclear fuel. To account for differences in mechanical response resulting in changes to particle distribution it is necessary to scale the DUO2 results to get a proper measure for spent fuel. This is accomplished with the spent fuel ratio (SFR), the ratio of respirable aerosol mass released due to identical damage conditions between a spent fuel and a surrogate material like depleted uranium oxide (DUO2). A very limited number of full-scale experiments have been carried out to capture this data, and the oft-questioned validity of the results typically leads to overly-conservative risk estimates. In the present work, the ALE3D hydrocode is used to simulate DUO2 and spent nuclear fuel pellets impacted by metal jets. The results demonstrate an alternative approach to estimate the respirable release fraction of fragmented nuclear fuel.

  9. A 3D numerical simulation of different phases of friction stir welding

    NASA Astrophysics Data System (ADS)

    Guerdoux, S.; Fourment, L.

    2009-10-01

    An adaptive arbitrary Lagrangian-Eulerian formulation is developed to compute the material flow and the temperature evolution during the three phases of the friction stir welding (FSW) process. It follows a splitting approach: after the calculations of the velocity/pressure and temperature fields, the mesh velocity is derived from the domain boundary evolution and from an adaptive refinement criterion provided by error estimation, and finally state variables are remapped. In this way, the unilateral contact conditions between the plate and the tool are accurately taken into account, so allowing one to model various instabilities that may occur during the process, such as the role played by the plunge depth of the tool on the formations of flashes, the possible appearance of non-steady voids or tunnel holes and the influence of the threads on the material flow, the temperature field and the welding efforts. This formulation is implemented in the 3D Forge3 FE software with automatic remeshing. The non-steady phases of FSW can so be simulated, as well as the steady welding phase. The study of different process conditions shows that the main phenomena taking place during FSW can be simulated with the right sensitivities.

  10. Pattern formation in 3-D numerical models of down-built diapirs initiated by a Rayleigh-Taylor instability

    NASA Astrophysics Data System (ADS)

    Fernandez, Naiara; Kaus, Boris J. P.

    2015-08-01

    Many salt diapirs are thought to have formed as a result of down-building, which implies that the top of the diapir remained close to the surface during syn-halokinetic sediment deposition. Down-building is largely a 3-D process and in order to better understand what controls the patterns of the diapirs that form by this process, we here perform 3-D numerical models of down-built diapirs initiated by the gravity instability in linear viscous materials and compare the results with analytical models. We vary several parameters of the numerical models such as initial salt thickness, sedimentation rate, salt viscosity, salt-sediment viscosity ratio as well as the density of sediments. Down-building of 3-D diapirs only occurs for a certain range of parameters and is favoured by lower sediment/salt viscosity contrasts and sedimentation rates in agreement with analytical predictions and findings from previous 2-D models. However, the models show that the sedimentation rate has an additional effect on the formation and evolution of 3-D diapir patterns. At low sedimentation rates, salt ridges that form during early model stages remain preserved at later stages as well. For higher sedimentation rates, the initial salt ridges are covered up and finger-like diapirs form at their junctions, which results in different salt exposure patterns at the surface. Once the initial pattern of diapirs is formed, higher sedimentation rate can also result in covered diapirs if the diapir extrusion velocity is insufficiently large. We quantify the effect of sedimentation rate on the number of diapirs exposed at the surface as well as on their spacing and we explain the observations with analytical predictions using thick-plate analytical models. In some cases, this final pattern is distinctly different from the initial polygonal pattern.

  11. The 3-D numerical simulation research of vacuum injector for linear induction accelerator

    NASA Astrophysics Data System (ADS)

    Liu, Dagang; Xie, Mengjun; Tang, Xinbing; Liao, Shuqing

    2017-01-01

    Simulation method for voltage in-feed and electron injection of vacuum injector is given, and verification of the simulated voltage and current is carried out. The numerical simulation for the magnetic field of solenoid is implemented, and a comparative analysis is conducted between the simulation results and experimental results. A semi-implicit difference algorithm is adopted to suppress the numerical noise, and a parallel acceleration algorithm is used for increasing the computation speed. The RMS emittance calculation method of the beam envelope equations is analyzed. In addition, the simulated results of RMS emittance are compared with the experimental data. Finally, influences of the ferromagnetic rings on the radial and axial magnetic fields of solenoid as well as the emittance of beam are studied.

  12. 3-D numerical modeling for axisymmetrical piezoelectric structures: application to high-frequency ultrasonic transducers.

    PubMed

    Filoux, Erwan; Callé, Samuel; Lou-Moeller, Rasmus; Lethiecq, Marc; Levassort, Franck

    2010-05-01

    The transient analysis of piezoelectric transducers is often performed using finite-element or finite-difference time-domain methods, which efficiently calculate the vibration of the structure but whose numerical dispersion prevents the modeling of waves propagating over large distances. A second analytical or numerical simulation is therefore often required to calculate the pressure field in the propagating medium (typically water) to deduce many important characteristics of the transducer, such as spatial resolutions and side lobe levels. This is why a hybrid algorithm was developed, combining finite- difference and pseudo-spectral methods in the case of 2-D configurations to simulate accurately both the generation of acoustic waves by the piezoelectric transducer and their propagation in the surrounding media using a single model. The algorithm was redefined in this study to take all three dimensions into account and to model single-element transducers, which usually present axisymmetrical geometry. This method was validated through comparison of its results with those of finite-element software, and was used to simulate the behavior of planar and lens-focused transducers. A high-frequency (30 MHz) transducer based on a screen-printed piezoelectric thick film was fabricated and characterized. The numerical results of the hybrid algorithm were found to be in good agreement with the experimental measurements of displacements at the surface of the transducer and of pressure radiated in water in front of the transducer.

  13. A numerical method for the inverse problem of cell traction in 3D

    NASA Astrophysics Data System (ADS)

    Vitale, G.; Preziosi, L.; Ambrosi, D.

    2012-09-01

    Force traction microscopy is an inversion method that allows us to obtain the stress field applied by a living cell on the environment on the basis of a pointwise knowledge of the displacement produced by the cell itself. This classical biophysical problem, usually addressed in terms of Green’s functions, can be alternatively tackled in a variational framework. In such a case, a variation of the error functional under suitable regularization is operated in view of its minimization. This setting naturally suggests the introduction of a new equation, based on the adjoint operator of the elasticity problem. In this paper, we illustrate a numerical strategy of the inversion method that discretizes the partial differential equations associated with the optimal control problem by finite elements. A detailed discussion of the numerical approximation of a test problem (with known solution) that contains most of the mathematical difficulties of the real one allows a precise evaluation of the degree of confidence that one can achieve in the numerical results.

  14. A real-time emergency response workstation using a 3-D numerical model initialized with sodar

    SciTech Connect

    Lawver, B.S.; Sullivan, T.J.; Baskett, R.L.

    1993-01-28

    Many emergency response dispersion modeling systems provide simple Gaussian models driven by single meteorological tower inputs to estimate the downwind consequences from accidental spills or stack releases. Complex meteorological or terrain settings demand more sophisticated resolution of the three-dimensional structure of the atmosphere to reliably calculate plume dispersion. Mountain valleys and sea breeze flows are two common examples of such settings. To address these complexities, the authors have implemented the three-dimensional diagnostic MATHEW mass-adjusted wind field and ADPIC particle-in-cell dispersion models on a workstation for use in real-time emergency response modeling. MATHEW/ADPIC have shown their utility in a variety of complex settings over the last 15 years within the Department of Energy`s Atmospheric Release Advisory Capability (ARAC) project. The models are initialized using an array of surface wind measurements from meteorological towers coupled with vertical profiles from an acoustic sounder (sodar). The workstation automatically acquires the meteorological data every 15 minutes. A source term is generated using either defaults or a real-time stack monitor. Model outputs include contoured isopleths displayed on site geography or plume densities shown over 3-D color shaded terrain. The models are automatically updated every 15 minutes to provide the emergency response manager with a continuous display of potentially hazardous ground-level conditions if an actual release were to occur. Model run time is typically less than 2 minutes on 6 megaflop ({approximately}30 MIPS) workstations. Data acquisition, limited by dial-up modem communications, requires 3 to 5 minutes.

  15. 3-D Numerical Modeling as a Tool for Managing Mineral Water Extraction from a Complex Groundwater Basin in Italy

    NASA Astrophysics Data System (ADS)

    Zanini, A.; Tanda, M.

    2007-12-01

    The groundwater in Italy plays an important role as drinking water; in fact it covers about the 30% of the national demand (70% in Northern Italy). The mineral water distribution in Italy is an important business with an increasing demand from abroad countries. The mineral water Companies have a great interest in order to increase the water extraction, but for the delicate and complex geology of the subsoil, where such very high quality waters are contained, a particular attention must be paid in order to avoid an excessive lowering of the groundwater reservoirs or great changes in the groundwater flow directions. A big water Company asked our University to set up a numerical model of the groundwater basin, in order to obtain a useful tool which allows to evaluate the strength of the aquifer and to design new extraction wells. The study area is located along Appennini Mountains and it covers a surface of about 18 km2; the topography ranges from 200 to 600 m a.s.l.. In ancient times only a spring with naturally sparkling water was known in the area, but at present the mineral water is extracted from deep pumping wells. The area is characterized by a very complex geology: the subsoil structure is described by a sequence of layers of silt-clay, marl-clay, travertine and alluvial deposit. Different groundwater layers are present and the one with best quality flows in the travertine layer; the natural flow rate seems to be not subjected to seasonal variations. The water age analysis revealed a very old water which means that the mineral aquifers are not directly connected with the meteoric recharge. The Geologists of the Company suggest that the water supply of the mineral aquifers comes from a carbonated unit located in the deep layers of the mountains bordering the spring area. The valley is crossed by a river that does not present connections to the mineral aquifers. Inside the area there are about 30 pumping wells that extract water at different depths. We built a 3

  16. Numerical and experimental study of the 3D effect on connecting arm of vertical axis tidal current turbine

    NASA Astrophysics Data System (ADS)

    Guo, Wei; Kang, Hai-gui; Chen, Bing; Xie, Yu; Wang, Yin

    2016-03-01

    Vertical axis tidal current turbine is a promising device to extract energy from ocean current. One of the important components of the turbine is the connecting arm, which can bring about a significant effect on the pressure distribution along the span of the turbine blade, herein we call it 3D effect. However, so far the effect is rarely reported in the research, moreover, in numerical simulation. In the present study, a 3D numerical model of the turbine with the connecting arm was developed by using FLUENT software compiling the UDF (User Defined Function) command. The simulation results show that the pressure distribution along the span of blade with the connecting arm model is significantly different from those without the connecting arm. To facilitate the validation of numerical model, the laboratory experiment has been carried out by using three different types of NACA aerofoil connecting arm and circle section connecting arm. And results show that the turbine with NACA0012 connecting arm has the best start-up performance which is 0.346 m/s and the peak point of power conversion coefficient is around 0.33. A further study has been performed and a conclusion is drawn that the aerofoil and thickness of connecting arm are the most important factors on the power conversion coefficient of the vertical axis tidal current turbine.

  17. Code and Solution Verification of 3D Numerical Modeling of Flow in the Gust Erosion Chamber

    NASA Astrophysics Data System (ADS)

    Yuen, A.; Bombardelli, F. A.

    2014-12-01

    Erosion microcosms are devices commonly used to investigate the erosion and transport characteristics of sediments at the bed of rivers, lakes, or estuaries. In order to understand the results these devices provide, the bed shear stress and flow field need to be accurately described. In this research, the UMCES Gust Erosion Microcosm System (U-GEMS) is numerically modeled using Finite Volume Method. The primary aims are to simulate the bed shear stress distribution at the surface of the sediment core/bottom of the microcosm, and to validate the U-GEMS produces uniform bed shear stress at the bottom of the microcosm. The mathematical model equations are solved by on a Cartesian non-uniform grid. Multiple numerical runs were developed with different input conditions and configurations. Prior to developing the U-GEMS model, the General Moving Objects (GMO) model and different momentum algorithms in the code were verified. Code verification of these solvers was done via simulating the flow inside the top wall driven square cavity on different mesh sizes to obtain order of convergence. The GMO model was used to simulate the top wall in the top wall driven square cavity as well as the rotating disk in the U-GEMS. Components simulated with the GMO model were rigid bodies that could have any type of motion. In addition cross-verification was conducted as results were compared with numerical results by Ghia et al. (1982), and good agreement was found. Next, CFD results were validated by simulating the flow within the conventional microcosm system without suction and injection. Good agreement was found when the experimental results by Khalili et al. (2008) were compared. After the ability of the CFD solver was proved through the above code verification steps. The model was utilized to simulate the U-GEMS. The solution was verified via classic mesh convergence study on four consecutive mesh sizes, in addition to that Grid Convergence Index (GCI) was calculated and based on

  18. Numerical validation framework for micromechanical simulations based on synchrotron 3D imaging

    NASA Astrophysics Data System (ADS)

    Buljac, Ante; Shakoor, Modesar; Neggers, Jan; Bernacki, Marc; Bouchard, Pierre-Olivier; Helfen, Lukas; Morgeneyer, Thilo F.; Hild, François

    2017-03-01

    A combined computational-experimental framework is introduced herein to validate numerical simulations at the microscopic scale. It is exemplified for a flat specimen with central hole made of cast iron and imaged via in-situ synchrotron laminography at micrometer resolution during a tensile test. The region of interest in the reconstructed volume, which is close to the central hole, is analyzed by digital volume correlation (DVC) to measure kinematic fields. Finite element (FE) simulations, which account for the studied material microstructure, are driven by Dirichlet boundary conditions extracted from DVC measurements. Gray level residuals for DVC measurements and FE simulations are assessed for validation purposes.

  19. Numerical Methods for 3D Magneto-Rotational Core-Collapse Supernova Simulation with Jet Formation

    NASA Astrophysics Data System (ADS)

    Käppeli, R. Y.

    2013-12-01

    The work presented in this thesis is devoted to the development of a numerical model for the three dimensional simulation of magneto-rotational core-collapse supernovae (MHD-CCSNe) with jet formation. The numerical model then suggests that MHD-CCSNe naturally provide a possible site for the strong rapid neutron capture process in agreement with observations of the early Galactic chemical evolution. In the first part of this thesis, we develop several numerical methods and describe thoroughly their efficient implementations on current high-performance computer architectures. We develop a fast and simple computer code texttt{FISH} that solves the equations of magnetohydrodynamics. The code is parallelized with an optimal combination of shared and distributed memory paradigms and scales to several thousands processes on high-performance computer clusters. We develop a novel well-balanced numerical scheme for the Euler equations with gravitational source terms to preserve a discrete hydrostatic equilibrium exactly. Being able to accurately represent hydrostatic equilibria is of particular interest for the simulation of CCSN, because a large part of the newly forming neutron star evolves in a quasi-hydrostatic manner. We include an approximate and computationally efficient treatment of neutrino physics in the form of a spectral leakage scheme. It enables us to capture approximately the most important neutrino cooling effects, which are responsible for the shock stall and for the neutronisation of matter behind the shock. The latter is crucial for the nucleosynthesis yields. To fit into our multidimensional MHD-CCSN model, the spectral leakage scheme is implemented in a ray-by-ray approach. In the second part of this thesis, we apply our three-dimensional numerical model to the study of the MHD-CCSN explosion mechanism. We investigate a series of models with poloidal magnetic field and varying initial angular momentum distribution through the collapse, bounce and jet

  20. 3D numerical model for a focal plane view in case of mosaic grating compressor for high energy CPA chain.

    PubMed

    Montant, S; Marre, G; Blanchot, N; Rouyer, C; Videau, L; Sauteret, C

    2006-12-11

    An important issue, mosaic grating compressor, is studied to recompress pulses for multiPetawatt, high energy laser systems. Alignment of the mosaic elements is crucial to control the focal spot and thus the intensity on target. No theoretical approach analyses the influence of compressor misalignment on spatial and temporal profiles in the focal plane. We describe a simple 3D numerical model giving access to the focal plane view after a compressor. This model is computationally inexpensive since it needs only 1D Fourier transforms to access to the temporal profile. We present simulations of monolithic and mosaic grating compressors.

  1. Calculation of grain boundary normals directly from 3D microstructure images

    DOE PAGES

    Lieberman, E. J.; Rollett, A. D.; Lebensohn, R. A.; ...

    2015-03-11

    The determination of grain boundary normals is an integral part of the characterization of grain boundaries in polycrystalline materials. These normal vectors are difficult to quantify due to the discretized nature of available microstructure characterization techniques. The most common method to determine grain boundary normals is by generating a surface mesh from an image of the microstructure, but this process can be slow, and is subject to smoothing issues. A new technique is proposed, utilizing first order Cartesian moments of binary indicator functions, to determine grain boundary normals directly from a voxelized microstructure image. In order to validate the accuracymore » of this technique, the surface normals obtained by the proposed method are compared to those generated by a surface meshing algorithm. Specifically, the local divergence between the surface normals obtained by different variants of the proposed technique and those generated from a surface mesh of a synthetic microstructure constructed using a marching cubes algorithm followed by Laplacian smoothing is quantified. Next, surface normals obtained with the proposed method from a measured 3D microstructure image of a Ni polycrystal are used to generate grain boundary character distributions (GBCD) for Σ3 and Σ9 boundaries, and compared to the GBCD generated using a surface mesh obtained from the same image. Finally, the results show that the proposed technique is an efficient and accurate method to determine voxelized fields of grain boundary normals.« less

  2. Calculation of grain boundary normals directly from 3D microstructure images

    SciTech Connect

    Lieberman, E. J.; Rollett, A. D.; Lebensohn, R. A.; Kober, E. M.

    2015-03-11

    The determination of grain boundary normals is an integral part of the characterization of grain boundaries in polycrystalline materials. These normal vectors are difficult to quantify due to the discretized nature of available microstructure characterization techniques. The most common method to determine grain boundary normals is by generating a surface mesh from an image of the microstructure, but this process can be slow, and is subject to smoothing issues. A new technique is proposed, utilizing first order Cartesian moments of binary indicator functions, to determine grain boundary normals directly from a voxelized microstructure image. In order to validate the accuracy of this technique, the surface normals obtained by the proposed method are compared to those generated by a surface meshing algorithm. Specifically, the local divergence between the surface normals obtained by different variants of the proposed technique and those generated from a surface mesh of a synthetic microstructure constructed using a marching cubes algorithm followed by Laplacian smoothing is quantified. Next, surface normals obtained with the proposed method from a measured 3D microstructure image of a Ni polycrystal are used to generate grain boundary character distributions (GBCD) for Σ3 and Σ9 boundaries, and compared to the GBCD generated using a surface mesh obtained from the same image. Finally, the results show that the proposed technique is an efficient and accurate method to determine voxelized fields of grain boundary normals.

  3. Liquid immersion thermal crosslinking of 3D polymer nanopatterns for direct carbonisation with high structural integrity

    PubMed Central

    Kang, Da-Young; Kim, Cheolho; Park, Gyurim; Moon, Jun Hyuk

    2015-01-01

    The direct pyrolytic carbonisation of polymer patterns has attracted interest for its use in obtaining carbon materials. In the case of carbonisation of nanopatterned polymers, the polymer flow and subsequent pattern change may occur in order to relieve their high surface energies. Here, we demonstrated that liquid immersion thermal crosslinking of polymer nanopatterns effectively enhanced the thermal resistance and maintained the structure integrity during the heat treatment. We employed the liquid immersion thermal crosslinking for 3D porous SU8 photoresist nanopatterns and successfully converted them to carbon nanopatterns while maintaining their porous features. The thermal crosslinking reaction and carbonisation of SU8 nanopatterns were characterised. The micro-crystallinity of the SU8-derived carbon nanopatterns was also characterised. The liquid immersion heat treatment can be extended to the carbonisation of various polymer or photoresist nanopatterns and also provide a facile way to control the surface energy of polymer nanopatterns for various purposes, for example, to block copolymer or surfactant self-assemblies. PMID:26677949

  4. Analytical and numerical investigations on the accuracy and robustness of geometric features extracted from 3D point cloud data

    NASA Astrophysics Data System (ADS)

    Dittrich, André; Weinmann, Martin; Hinz, Stefan

    2017-04-01

    In photogrammetry, remote sensing, computer vision and robotics, a topic of major interest is represented by the automatic analysis of 3D point cloud data. This task often relies on the use of geometric features amongst which particularly the ones derived from the eigenvalues of the 3D structure tensor (e.g. the three dimensionality features of linearity, planarity and sphericity) have proven to be descriptive and are therefore commonly involved for classification tasks. Although these geometric features are meanwhile considered as standard, very little attention has been paid to their accuracy and robustness. In this paper, we hence focus on the influence of discretization and noise on the most commonly used geometric features. More specifically, we investigate the accuracy and robustness of the eigenvalues of the 3D structure tensor and also of the features derived from these eigenvalues. Thereby, we provide both analytical and numerical considerations which clearly reveal that certain features are more susceptible to discretization and noise whereas others are more robust.

  5. Numerical study of 3-D inducer and impeller for pump model development

    NASA Astrophysics Data System (ADS)

    Cheng, G. C.; Chen, Y. S.; Garcia, R.; Williams, R. W.

    1993-07-01

    Current design of high-performance turbopumps for rocket engines requires effective and robust analytical tools to provide design information in a productive manner. The main goal of this study is to develop a robust and effective CFD pump model for general turbopump design and analysis applications. A finite difference Navier-Stokes flow solver, FDNS, which includes an extended k-epsilon turbulence model and appropriate moving zonal interface boundary conditions, was developed to analyze turbulent flows in turbomachinery devices. In the present study, two key components of the turbopump, the inducer and impeller, were investigated by the proposed pump model, and the numerical results were benchmarked by the experimental data provided by Rocketdyne.

  6. 3D numerical study of tumor microenvironmental flow in response to vascular-disrupting treatments.

    PubMed

    Wu, Jie; Cai, Yan; Xu, Shixiong; Longs, Quan; Ding, Zurong; Dong, Cheng

    2012-06-01

    The effects of vascular-disrupting treatments on normalization of tumor microvasculature and its microenvironmental flow were investigated, by mathematical modeling and numerical simulation of tumor vascular-disrupting and tumor haemodynamics. Four disrupting approaches were designed according to the abnormal characteristics of tumor microvasculature compared with the normal one. The results predict that the vascular-disrupting therapies could improve tumor microenvironment, eliminate drug barrier and inhibit metastasis of tumor cells to some extent. Disrupting certain types of vessels may get better effects. In this study, the flow condition on the networks with "vascular-disrupting according to flowrate" is the best comparing with the other three groups, and disrupting vessels of lower maturity could effectively enhance fluid transport across vasculature into interstitial space.

  7. Numerical study of 3-D inducer and impeller for pump model development

    NASA Technical Reports Server (NTRS)

    Cheng, G. C.; Chen, Y. S.; Garcia, R.; Williams, R. W.

    1993-01-01

    Current design of high-performance turbopumps for rocket engines requires effective and robust analytical tools to provide design information in a productive manner. The main goal of this study is to develop a robust and effective CFD pump model for general turbopump design and analysis applications. A finite difference Navier-Stokes flow solver, FDNS, which includes an extended k-epsilon turbulence model and appropriate moving zonal interface boundary conditions, was developed to analyze turbulent flows in turbomachinery devices. In the present study, two key components of the turbopump, the inducer and impeller, were investigated by the proposed pump model, and the numerical results were benchmarked by the experimental data provided by Rocketdyne.

  8. 3-D numerical investigation of the mantle dynamics associated with the breakup of Pangea

    SciTech Connect

    Baumgardner, J.R.

    1992-01-01

    Three-dimensional finite element calculations in spherical geometry are performed to study the response of the mantle with platelike blocks at its surface to an initial condition corresponding to subduction along the margins of Pangea. The mantle is treated as an infinite Prandtl number Boussinesq fluid inside a spherical shell with isothermal, undeformable, free-slip boundaries. Nonsubducting rigid blocks to model continental lithosphere are included in the topmost layer of the computational mesh. At the beginning of the numerical experiments these blocks represent the present continents mapped to their approximate Pangean positions. Asymmetrical downwelling at the margins of these nonsubducting blocks results in a pattern of stresses that acts to pull the supercontinent apart. The calculations suggest that the breakup of Pangea and the subsequent global pattern of seafloor spreading was driven largely by the subduction at the Pangean margins.

  9. 3-D numerical investigation of the mantle dynamics associated with the breakup of Pangea

    SciTech Connect

    Baumgardner, J.R.

    1992-10-01

    Three-dimensional finite element calculations in spherical geometry are performed to study the response of the mantle with platelike blocks at its surface to an initial condition corresponding to subduction along the margins of Pangea. The mantle is treated as an infinite Prandtl number Boussinesq fluid inside a spherical shell with isothermal, undeformable, free-slip boundaries. Nonsubducting rigid blocks to model continental lithosphere are included in the topmost layer of the computational mesh. At the beginning of the numerical experiments these blocks represent the present continents mapped to their approximate Pangean positions. Asymmetrical downwelling at the margins of these nonsubducting blocks results in a pattern of stresses that acts to pull the supercontinent apart. The calculations suggest that the breakup of Pangea and the subsequent global pattern of seafloor spreading was driven largely by the subduction at the Pangean margins.

  10. 3-D numerical simulations of a growing planet with the core formation by the impact

    NASA Astrophysics Data System (ADS)

    Furuichi, M.; Nakagawa, T.

    2011-12-01

    The formation of a metallic core is widely accepted as the biggest differentiation event during the final stage of the planetary formation [e.g. Stevenson, 1990]. The early Earth hypothesis also suggested that the core formation process would be an important for understanding the initial condition (both thermal and chemical) of mantle convection [Labrosse et al., 2007]. Although the formation process of metallic core is still not clear, it is clear that the different time-scale of dynamics in solid and liquid contribute to that. Here, we assume the scenario that the planetesimal impact induces a significant volume of melt which laterally spreads over the global (magma ocean) or regional area (magma pond) in the short crystallization time scale (~300yr) [Reese and Solomatov, 2006]. After the solidification of magma ocean/pond, hot metallic and silicate rich layers are created [e.g. Senshu et al., 2002]. Since the heavy metal rich material causes the gravitational instability in the viscous planet's interior, the planetary core would form with sinking the metallic material into the center. The silicate layer which floods from the magma pond, deforms as a viscous flow on the planetary surface due to the isostatic adjustment. A series of event on the core formation would have the time-scale of ~100 Mys at the maximum. In order to investigate the scenario described above, we developed the simulation code to solve the Stokes flow with the free surface under the self-gravitating field in 3-D, designed for the massively parallel/vector supercomputer system Earth Simulator 2(ES2) [Furuichi, 2011]. Expressing the free surface motion, a stick air layer, which is the low viscosity layer surrounding the planetary surface, is assumed [e.g. Furuichi et al, 2009]. An ill conditioned Stokes problem of the finite difference discretization on a staggered grid, is solved by iterative Stokes flow solver, robust to large viscosity jumps, using a strong Schur complement preconditioner

  11. Geological characterization of Italian reservoirs and numerical 3D modelling of CO2 storage scenarios into saline aquifers

    NASA Astrophysics Data System (ADS)

    Beretta, S.; Moia, F.; Guandalini, R.; Cappelletti, F.

    2012-04-01

    The research activities carried out by the Environment and Sustainable Development Department of RSE S.p.A. aim to evaluate the feasibility of CO2 geological sequestration in Italy, with particular reference to the storage into saline aquifers. The identification and geological characterization of the Italian potential storage sites, together with the study of the temporal and spatial evolution of the CO2 plume within the caprock-reservoir system, are performed using different modelling tools available in the Integrated Analysis Modelling System (SIAM) entirely powered in RSE. The numerical modelling approach is the only one that allows to investigate the behaviour of the injected CO2 regarding the fluid dynamic, geochemical and geomechanical aspects and effects due to its spread, in order to verify the safety of the process. The SIAM tools allow: - Selection of potential Italian storage sites through geological and geophysical data collected in the GIS-CO2 web database; - Characterization of caprock and aquifer parameters, seismic risk and environmental link for the selected site; - Creation of the 3D simulation model for the selected domain, using the modeller METHODRdS powered by RSE and the mesh generator GMSH; - Simulation of the injection and the displacement of CO2: multiphase fluid 3D dynamics is based on the modified version of TOUGH2 model; - Evaluation of geochemical reaction effects; - Evaluation of geomechanic effects, using the coupled 3D CANT-SD finite elements code; - Detailed local analysis through the use of open source auxiliary tools, such as SHEMAT and FEHM. - 3D graphic analysis of the results. These numerical tools have been successfully used for simulating the injection and the spread of CO2 into several real Italian reservoirs and have allowed to achieve accurate results in terms of effective storage capacity and safety analysis. The 3D geological models represent the high geological complexity of the Italian subsoil, where reservoirs are

  12. 3D integration of microcomponents in a single glass chip by femtosecond laser direct writing for biochemical analysis

    NASA Astrophysics Data System (ADS)

    Sugioka, Koji; Hanada, Yasutaka; Midorikawa, Katsumi

    2007-05-01

    3D integration of microcomponents in a single glass chip by femtosecond laser direct writing followed by post annealing and successive wet etching is described for application to biochemical analysis. Integration of microfluidics and microoptics realized some functional microdevices like a μ-fluidic dye laser and a biosensor. As one of practical applications, we demonstrate inspection of living microorganisms using the microchip with 3D microfluidic structures fabricated by the present technique.

  13. Pattern formation of down-built salt structures: insights from 3D numerical models

    NASA Astrophysics Data System (ADS)

    Fernandez, Naiara; Kaus, Boris

    2015-04-01

    Many salt diapirs are thought to have formed as a result of down-building, which implies that the top of the diapir remained close to the surface during sediment deposition. This process is largely three-dimensional and in order to better understand what controls the patterns that form as a result of this down-building process, we here perform three-dimensional numerical models and compare the results with analytical models. In our models, we vary several parameters such as initial salt thickness, sedimentation rate, salt viscosity, salt-sediment viscosity contrast as well as the density of sediments. Down-building of three-dimensional diapirs only occurs for a certain range of parameters and is favored by lower sediment/salt viscosity contrasts and sedimentation rates in agreement with analytical predictions and findings from previous 2D models. However, the models show that the sedimentation rate has an additional effect on the formation and evolution of three-dimensional diapir patterns. At low sedimentation rates, salt ridges that form during early model stages remain preserved at later stages as well. For higher sedimentation rates, the initial salt ridges break up and form finger-like diapirs at the junction of salt ridges, which results in different salt exposure patterns at the surface. Once the initial pattern of diapirs is formed, higher sedimentation rate can also result in covered diapirs if the diapir extrusion velocity is insufficiently large. We quantify the effect of sedimentation rate on the number of diapirs exposed at the surface as well as on their spacing. In some cases, this final pattern is distinctly different from the initial polygonal pattern. We also study the extrusion of salt through time in the simulations, and show that it can be related to the geometries of the sedimentary layers surrounding the diapirs. Acknowledgements. Funding was provided by the European Research Council under the European Community's Seventh Framework Program

  14. Temperature Mapping of 3D Printed Polymer Plates: Experimental and Numerical Study

    PubMed Central

    Kousiatza, Charoula; Chatzidai, Nikoleta; Karalekas, Dimitris

    2017-01-01

    In Fused Deposition Modeling (FDM), which is a common thermoplastic Additive Manufacturing (AM) method, the polymer model material that is in the form of a flexible filament is heated above its glass transition temperature (Tg) to a semi-molten state in the head’s liquefier. The heated material is extruded in a rastering configuration onto the building platform where it rapidly cools and solidifies with the adjoining material. The heating and rapid cooling cycles of the work materials exhibited during the FDM process provoke non-uniform thermal gradients and cause stress build-up that consequently result in part distortions, dimensional inaccuracy and even possible part fabrication failure. Within the purpose of optimizing the FDM technique by eliminating the presence of such undesirable effects, real-time monitoring is essential for the evaluation and control of the final parts’ quality. The present work investigates the temperature distributions developed during the FDM building process of multilayered thin plates and on this basis a numerical study is also presented. The recordings of temperature changes were achieved by embedding temperature measuring sensors at various locations into the middle-plane of the printed structures. The experimental results, mapping the temperature variations within the samples, were compared to the corresponding ones obtained by finite element modeling, exhibiting good correlation. PMID:28245557

  15. A numerical investigation of the 3-D flow in shell and tube heat exchangers

    SciTech Connect

    Prithiviraj, M.; Andrews, M.J.

    1996-12-31

    A three-dimensional computer program for simulation of the flow and heat transfer inside Shell and Tube Heat Exchangers has been developed. The simulation of shell and tube heat exchangers is based on a distributed resistance method that uses a modified two equation {kappa}-{epsilon} turbulence model along with non-equilibrium wall functions. Volume porosities and non-homogeneous surface permeabilities account for the obstructions due to the tubes and arbitrary arrangement of baffles. Sub-models are described for baffle-shell and baffle-tube leakage, shellside and tubeside heat transfer, with geometry generators for tubes, baffles, and nozzle inlets and outlets. The sub-models in HEATX use parameters that have not been altered from their published values. Computed heat transfer and pressure drop are compared with experimental data from the Delaware project (Bell, 1963). Numerically computed pressure drops are also compared for different baffle cuts, and different number of baffles with the experiments of Halle et al. (1984) which were performed in an industrial sized heat exchanger at Argonne National Labs. Discussion of the results is given with particular reference to global and local properties such as pressure drop, temperature variation, and heat transfer coefficients. Good agreement is obtained between the experiments and HEATX computations for the shellside pressure drop and outlet temperatures for the shellside and tubeside streams.

  16. Temperature Mapping of 3D Printed Polymer Plates: Experimental and Numerical Study.

    PubMed

    Kousiatza, Charoula; Chatzidai, Nikoleta; Karalekas, Dimitris

    2017-02-24

    In Fused Deposition Modeling (FDM), which is a common thermoplastic Additive Manufacturing (AM) method, the polymer model material that is in the form of a flexible filament is heated above its glass transition temperature (Tg) to a semi-molten state in the head's liquefier. The heated material is extruded in a rastering configuration onto the building platform where it rapidly cools and solidifies with the adjoining material. The heating and rapid cooling cycles of the work materials exhibited during the FDM process provoke non-uniform thermal gradients and cause stress build-up that consequently result in part distortions, dimensional inaccuracy and even possible part fabrication failure. Within the purpose of optimizing the FDM technique by eliminating the presence of such undesirable effects, real-time monitoring is essential for the evaluation and control of the final parts' quality. The present work investigates the temperature distributions developed during the FDM building process of multilayered thin plates and on this basis a numerical study is also presented. The recordings of temperature changes were achieved by embedding temperature measuring sensors at various locations into the middle-plane of the printed structures. The experimental results, mapping the temperature variations within the samples, were compared to the corresponding ones obtained by finite element modeling, exhibiting good correlation.

  17. Numerical Modeling of 3-D Dynamics of Ultrasound Contrast Agent Microbubbles Using the Boundary Integral Method

    NASA Astrophysics Data System (ADS)

    Calvisi, Michael; Manmi, Kawa; Wang, Qianxi

    2014-11-01

    Ultrasound contrast agents (UCAs) are microbubbles stabilized with a shell typically of lipid, polymer, or protein and are emerging as a unique tool for noninvasive therapies ranging from gene delivery to tumor ablation. The nonspherical dynamics of contrast agents are thought to play an important role in both diagnostic and therapeutic applications, for example, causing the emission of subharmonic frequency components and enhancing the uptake of therapeutic agents across cell membranes and tissue interfaces. A three-dimensional model for nonspherical contrast agent dynamics based on the boundary integral method is presented. The effects of the encapsulating shell are approximated by adapting Hoff's model for thin-shell, spherical contrast agents to the nonspherical case. A high-quality mesh of the bubble surface is maintained by implementing a hybrid approach of the Lagrangian method and elastic mesh technique. Numerical analyses for the dynamics of UCAs in an infinite liquid and near a rigid wall are performed in parameter regimes of clinical relevance. The results show that the presence of a coating significantly reduces the oscillation amplitude and period, increases the ultrasound pressure amplitude required to incite jetting, and reduces the jet width and velocity.

  18. Influence of Critical Current Density on Magnetic Force of Htsc Bulk above Pmr with 3D-MODELING Numerical Solutions

    NASA Astrophysics Data System (ADS)

    Lu, Yiyun; Lu, Bingjuan; Ge, Yunwang; Chen, Wenqing

    Numerical electromagnetic field simulations of high-temperature superconductors (HTSC) bulk were carried out to calculate the magnetic force between the HTSC bulk and the permanent magnet railway (PMR). A 3D-modeling numerical calculation method is proposed using the finite element method. The model is formulated with the magnetic field vector (H-method). The resulting code was written with FORTRAN language. The electric field intensity E and the current density J constitutive relation of HTSC were described with E-J power law. The Kim macro-model is used to describe critical current density Jc of HTSC bulk. Two virtual HTSC bulks were used to solve the critical current density Jc anisotropic properties of HTSC materials. A superconducting levitation system composed of one HTSC bulk and PMR is successfully investigated using the proposed method. By this method, the influence of critical current density on magnetic levitation force of the superconducting levitation system is mathematically studied.

  19. 3D-2D registration of cerebral angiograms based on vessel directions and intensity gradients

    NASA Astrophysics Data System (ADS)

    Mitrovic, Uroš; Špiclin, Žiga; Štern, Darko; Markelj, Primož; Likar, Boštjan; Miloševic, Zoran; Pernuš, Franjo

    2012-02-01

    Endovascular treatment of cerebral aneurysms and arteriovenous malformations (AVM) involves navigation of a catheter through the femoral artery and vascular system to the site of pathology. Intra-interventional navigation is done under the guidance of one or at most two two-dimensional (2D) X-ray fluoroscopic images or 2D digital subtracted angiograms (DSA). Due to the projective nature of 2D images, the interventionist needs to mentally reconstruct the position of the catheter in respect to the three-dimensional (3D) patient vasculature, which is not a trivial task. By 3D-2D registration of pre-interventional 3D images like CTA, MRA or 3D-DSA and intra-interventional 2D images, intra-interventional tools such as catheters can be visualized on the 3D model of patient vasculature, allowing easier and faster navigation. Such a navigation may consequently lead to the reduction of total ionizing dose and delivered contrast medium. In the past, development and evaluation of 3D-2D registration methods for endovascular treatments received considerable attention. The main drawback of these methods is that they have to be initialized rather close to the correct position as they mostly have a rather small capture range. In this paper, a novel registration method that has a higher capture range and success rate is proposed. The proposed method and a state-of-the-art method were tested and evaluated on synthetic and clinical 3D-2D image-pairs. The results on both databases indicate that although the proposed method was slightly less accurate, it significantly outperformed the state-of-the-art 3D-2D registration method in terms of robustness measured by capture range and success rate.

  20. Numerical modelling and measurement of cell trajectories in 3-D under the influence of dielectrophoretic and hydrodynamic forces.

    PubMed

    Holzner, Felix; Hagmeyer, Britta; Schütte, Julia; Kubon, Massimo; Angres, Brigitte; Stelzle, Martin

    2011-09-01

    This research is part of a program aiming at the development of a fluidic microsystem for in vitro drug testing. For this purpose, primary cells need to be assembled to form cellular aggregates in such a way as to resemble the basic functional units of organs. By providing for in vivo-like cellular contacts, proper extracellular matrix interaction and medium perfusion it is expected that cells will retain their phenotype over prolonged periods of time. In this way, in vitro test systems exhibiting in vivo type predictivity in drug testing are envisioned. Towards this goal a 3-D microstructure micro-milled in a cyclic olefin copolymer (COC) was designed in such a way as to assemble liver cells via insulator-based dielectrophoresis (iDEP) in a sinusoid-type fashion. First, numeric modelling and simulation of dielectrophoretic and hydrodynamic forces acting on cells in this microsystem was performed. In particular, the problem of the discontinuity of the electric field at the interface between the fluid media in the system and the polymer materials it consists of was addressed. It was shown that in certain cases, the material of the microsystem may be neglected altogether without introducing considerable error into the numerical solution. This simplification enabled the simulation of 3-D cell trajectories in complex chip geometries. Secondly, the assembly of HepG2 cells by insulator-based dielectrophoresis in this device is demonstrated. Finally, theoretical results were validated by recording 3-D cell trajectories and the Clausius-Mossotti factor of liver cells was determined by combining results obtained from both simulation and experiment.

  1. Interplate deformation at early-stage oblique subduction: 3-D thermomechanical numerical modeling

    NASA Astrophysics Data System (ADS)

    Malatesta, Cristina; Gerya, Taras; Crispini, Laura; Federico, Laura; Capponi, Giovanni

    2016-07-01

    Oblique subduction zones are complex settings where the simultaneous action of trench-normal and trench-parallel components of convergence can produce heterogeneous deformational pattern of the upper plate and affect the accretional/erosional behavior of the plate margin. Here we present three-dimensional thermomechanical numerical models that highlight some processes occurring in the early history (15-20 Myr) of intraoceanic oblique subduction zones, which so far represent the less studied case. These models have been compared with a simulation of a slab sinking under a continental plate. We test subduction starting in oceans floored by two classes of lithosphere: layered (fast spreading oceans) and serpentinite rich (slow to ultraslow spreading oceans). Two main domains develop along the margin of both type of oceanic plates: (a) a domain with a mostly stable trench, a shortening upper plate, characterized by the formation of a topographic relief, and (b) a domain with retreating trench and extending upper plate. In general, we observed that varying the subduction obliquity, the margin could either (i) record an erosional to a balanced accretion/erosion regime or (ii) be characterized by a predominant balanced accretion/erosion regime. In both cases, even where the sediment amount in the trench is high, the upper plate experiences tectonic erosion. We suggest that the formation of topographic reliefs on the fore arc is possibly related to the low amount of sediment in the trench, affecting interplate friction and promoting the upper plate indentation against the slab. The Puysegur subduction zone and the central Andes can be possibly natural examples of such a regime.

  2. Does fluid infiltration affect the motion of sediment grains? - A 3-D numerical modelling approach using SPH

    NASA Astrophysics Data System (ADS)

    Bartzke, Gerhard; Rogers, Benedict D.; Fourtakas, Georgios; Mokos, Athanasios; Huhn, Katrin

    2016-04-01

    The processes that cause the creation of a variety of sediment morphological features, e.g. laminated beds, ripples, or dunes, are based on the initial motion of individual sediment grains. However, with experimental techniques it is difficult to measure the flow characteristics, i.e., the velocity of the pore water flow in sediments, at a sufficient resolution and in a non-intrusive way. As a result, the role of fluid infiltration at the surface and in the interior affecting the initiation of motion of a sediment bed is not yet fully understood. Consequently, there is a strong need for numerical models, since these are capable of quantifying fluid driven sediment transport processes of complex sediment beds composed of irregular shapes. The numerical method Smoothed Particle Hydrodynamics (SPH) satisfies this need. As a meshless and Lagrangian technique, SPH is ideally suited to simulating flows in sediment beds composed of various grain shapes, but also flow around single grains at a high temporal and spatial resolution. The solver chosen is DualSPHysics (www.dual.sphysics.org) since this is validated for a range of flow conditions. For the present investigation a 3-D numerical flume model was generated using SPH with a length of 4.0 cm, a width of 0.05 cm and a height of 0.2 cm where mobile sediment particles were deposited in a recess. An experimental setup was designed to test sediment configurations composed of irregular grain shapes (grain diameter, D50=1000 μm). Each bed consisted of 3500 mobile objects. After the bed generation process, the entire domain was flooded with 18 million fluid particles. To drive the flow, an oscillating motion perpendicular to the bed was applied to the fluid, reaching a peak value of 0.3 cm/s, simulating 4 seconds of real time. The model results showed that flow speeds decreased logarithmically from the top of the domain towards the surface of the beds, indicating a fully developed boundary layer. Analysis of the fluid

  3. Role of Mechanical Cues in Cell Differentiation and Proliferation: A 3D Numerical Model

    PubMed Central

    Mousavi, Seyed Jamaleddin; Hamdy Doweidar, Mohamed

    2015-01-01

    Cell differentiation, proliferation and migration are essential processes in tissue regeneration. Experimental evidence confirms that cell differentiation or proliferation can be regulated according to the extracellular matrix stiffness. For instance, mesenchymal stem cells (MSCs) can differentiate to neuroblast, chondrocyte or osteoblast within matrices mimicking the stiffness of their native substrate. However, the precise mechanisms by which the substrate stiffness governs cell differentiation or proliferation are not well known. Therefore, a mechano-sensing computational model is here developed to elucidate how substrate stiffness regulates cell differentiation and/or proliferation during cell migration. In agreement with experimental observations, it is assumed that internal deformation of the cell (a mechanical signal) together with the cell maturation state directly coordinates cell differentiation and/or proliferation. Our findings indicate that MSC differentiation to neurogenic, chondrogenic or osteogenic lineage specifications occurs within soft (0.1-1 kPa), intermediate (20-25 kPa) or hard (30-45 kPa) substrates, respectively. These results are consistent with well-known experimental observations. Remarkably, when a MSC differentiate to a compatible phenotype, the average net traction force depends on the substrate stiffness in such a way that it might increase in intermediate and hard substrates but it would reduce in a soft matrix. However, in all cases the average net traction force considerably increases at the instant of cell proliferation because of cell-cell interaction. Moreover cell differentiation and proliferation accelerate with increasing substrate stiffness due to the decrease in the cell maturation time. Thus, the model provides insights to explain the hypothesis that substrate stiffness plays a key role in regulating cell fate during mechanotaxis. PMID:25933372

  4. X-ray self-emission imaging used to diagnose 3-D nonuniformities in direct-drive ICF implosions

    NASA Astrophysics Data System (ADS)

    Davis, A. K.; Michel, D. T.; Craxton, R. S.; Epstein, R.; Hohenberger, M.; Mo, T.; Froula, D. H.

    2016-11-01

    As hydrodynamics codes develop to increase understanding of three-dimensional (3-D) effects in inertial confinement fusion implosions, diagnostics must adapt to evaluate their predictive accuracy. A 3-D radiation postprocessor was developed to investigate the use of soft x-ray self-emission images of an imploding target to measure the size of nonuniformities on the target surface. Synthetic self-emission images calculated from 3-D simulations showed a narrow ring of emission outside the ablation surface of the target. Nonuniformities growing in directions perpendicular to the diagnostic axis were measured through angular variations in the radius of the steepest intensity gradient on the inside of the ring and through changes in the peak x-ray intensity in the ring as a function of angle. The technique was applied to an implosion to measure large 3-D nonuniformities resulting from two dropped laser beam quads at the National Ignition Facility.

  5. X-ray self-emission imaging used to diagnose 3-D nonuniformities in direct-drive ICF implosions.

    PubMed

    Davis, A K; Michel, D T; Craxton, R S; Epstein, R; Hohenberger, M; Mo, T; Froula, D H

    2016-11-01

    As hydrodynamics codes develop to increase understanding of three-dimensional (3-D) effects in inertial confinement fusion implosions, diagnostics must adapt to evaluate their predictive accuracy. A 3-D radiation postprocessor was developed to investigate the use of soft x-ray self-emission images of an imploding target to measure the size of nonuniformities on the target surface. Synthetic self-emission images calculated from 3-D simulations showed a narrow ring of emission outside the ablation surface of the target. Nonuniformities growing in directions perpendicular to the diagnostic axis were measured through angular variations in the radius of the steepest intensity gradient on the inside of the ring and through changes in the peak x-ray intensity in the ring as a function of angle. The technique was applied to an implosion to measure large 3-D nonuniformities resulting from two dropped laser beam quads at the National Ignition Facility.

  6. DIRECT DETECTION OF THE HELICAL MAGNETIC FIELD GEOMETRY FROM 3D RECONSTRUCTION OF PROMINENCE KNOT TRAJECTORIES

    SciTech Connect

    Zapiór, Maciej; Martinez-Gómez, David

    2016-02-01

    Based on the data collected by the Vacuum Tower Telescope located in the Teide Observatory in the Canary Islands, we analyzed the three-dimensional (3D) motion of so-called knots in a solar prominence of 2014 June 9. Trajectories of seven knots were reconstructed, giving information of the 3D geometry of the magnetic field. Helical motion was detected. From the equipartition principle, we estimated the lower limit of the magnetic field in the prominence to ≈1–3 G and from the Ampère’s law the lower limit of the electric current to ≈1.2 × 10{sup 9} A.

  7. Theoretical and numerical comparison of 3D numerical schemes for their accuracy with respect to P-wave to S-wave speed ratio

    NASA Astrophysics Data System (ADS)

    Moczo, P.; Kristek, J.; Galis, M.; Chaljub, E.; Chen, X.; Zhang, Z.

    2012-04-01

    Numerical modeling of earthquake ground motion in sedimentary basins and valleys often has to account for the P-wave to S-wave speed ratios (VP/VS) as large as five and even larger, mainly in sediments below groundwater level. The ratio can attain values larger than 10 - the unconsolidated lake sediments in Ciudad de México are a good example. At the same time, accuracy of the numerical schemes with respect to VP/VS has not been sufficiently analyzed. The numerical schemes are often applied without adequate check of the accuracy. We present theoretical analysis and numerical comparison of 18 3D numerical time-domain explicit schemes for modeling seismic motion for their accuracy with the varying VP/VS. The schemes are based on the finite-difference, spectral-element, finite-element and discontinuous-Galerkin methods. All schemes are presented in a unified form. Theoretical analysis compares accuracy of the schemes in terms of local errors in amplitude and vector difference. In addition to the analysis we compare numerically simulated seismograms with exact solutions for canonical configurations. We compare accuracy of the schemes in terms of the local errors, grid dispersion and full wavefield simulations with respect to the structure of the numerical schemes.

  8. 3D anodes for direct methanol fuel cells: Science and synthesis

    NASA Astrophysics Data System (ADS)

    Takmeel, Qanit

    The high specific energy density of methanol in direct methanol fuel cells (DMFCs) makes them particularly suitable for portable applications. However, a typical DMFC membrane electrode assembly (MEA) delivers an order of magnitude less power density compared to a hydrogen fuel cell MEA. Conventional DMFCs are operated at dilute methanol concentrations to counter problems arising from the methanol crossover issue. A breakthrough in power density can be achieved if the MEA structure is fundamentally altered to enable supply of more concentrated methanol than in current DMFCs. It has been shown that the current anode designs are limited by mass transport resulting in low current density. [1] An anode, with manifold increase in surface area, for catalysis would increase the limiting current density (jL), as a result of which the power density of the fuel cell would increase. In this work, the role of layering of Pt on Ru was studied and this lay the foundation towards understanding catalytic behavior in the fuel cell anode. Cyclic voltammetry (CV), in conjunction with copper underpotential deposition (Cu-UPD) and 15 kelvin probe force microscopy (KPFM), showed that by adjusting the thickness of Pt on a Ru substrate, the Fermi energy (EF) of the surface can be tailored to yield more efficient methanol electro-oxidizing catalysts. In order to increase the effective catalysis surface area, three-dimensional (3D) carbon based hierarchical structures were fabricated on which Pt-Ru catalyst was grown using atomic layer deposition (ALD). Scanning electron microscopy (SEM), with image processing, was used to determine the surface coverage of the carbon surfaces. CV showed that as much as hundred times the current density (j) can be achieved with such a structure as compared to a flat surface. Subsequently, mass transport limitations were studied via chronoamperometry (CA) performed in different methanol concentrations. The studies were also used to extract the rate order of

  9. 3D Numerical Simulations of Coupled Solid and Fluid Mechanics in Volcanic Conduit Erosion and Crater Formation

    NASA Astrophysics Data System (ADS)

    Wohletz, K. H.; Ogden, D. E.

    2008-12-01

    An essential element of explosive volcanic eruptions is the effect of the evolving conduit and vent on the erupting multiphase flow and the effect of the flow upon the conduit and vent rocks, a 3D geological nozzle problem. This coupling of the host rock solid mechanics with the fluid dynamics of an erupting multiphase fluid has never been directly simulated and is poorly understood. We apply a library of computer codes called CFDLib, which has been developed by the Theoretical Division at Los Alamos National Laboratory. This code provides the unique capability of being able to solve the interaction of an Eulerian fluid with a Lagrangian solid in 3D while treating multiphase turbulence that this interaction generates. Our previous work with CFDLib has been directed at validating results with laboratory experiments, verification against analytical models, and free-jet decompression. This work demonstrated the importance of vent overpressure in determining the characteristics of an erupted column of gas and tephra. However, eruption of an overpressured jet is strongly coupled to the dynamics of the vent shape that in turn is dependent upon conduit dynamics. For this reason most previous computer simulations of volcanic eruptions have assumed pressure-balanced conditions of flow from the vent. Here we demonstrate our progress in simulating vent evolution during eruption of an overpressured multiphase (steam and magma/rock) fluid. With increasing overpressure the evolved vent radius increases with the formation of a crater. The Mach Stem structure of the erupted jet resembles those of our previous simulations from a fixed vent, but the evolving vent nozzle and contributions of eroded material to the jet make its structure more complicated and variable with time. Future work will focus on study of the effects of host rock properties and 3D conduit shape.

  10. A fast numerical method for calculating the 3D proton dose profile in a single-ring wobbling spreading system.

    PubMed

    Riazi, Z; Afarideh, H; Sadighi-Bonabi, R

    2011-09-01

    Based on the determination of protons fluence at the phantom's surface, a 3D dose distribution is calculated inside a water phantom using a fast method. The dose contribution of secondary particles, originating from inelastic nuclear interactions, is also taken into account. This is achieved by assuming that 60% of the energy transferred to secondary particles is locally absorbed. Secondary radiation delivers approximately 16.8% of the total dose in the plateau region of the Bragg curve for monoenergetic protons of energy 190 MeV. The physical dose beyond the Bragg peak is obtained for a proton beam of 190 MeV using a Geant4 simulation. It is found that the dose beyond the Bragg peak is <0.02% of the maximum dose and is mainly delivered by protons produced via reactions of the secondary neutrons. The relative dose profile is also calculated by simulation of the proposed beam line in Geant4 code. The dose profile produced by our method agrees, within 2%, with the results predicted by the Fermi Eyges distribution function and the results of the Geant4 simulation. It is expected that the fast numerical approach proposed herein may be utilised in 3D deterministic treatment planning programs, to model proton propagation in order to analyse the effect of modifying the beam line.

  11. One-step direct-laser metal writing of sub-100 nm 3D silver nanostructures in a gelatin matrix

    NASA Astrophysics Data System (ADS)

    Kang, SeungYeon; Vora, Kevin; Mazur, Eric

    2015-03-01

    Developing an ability to fabricate high-resolution, 3D metal nanostructures in a stretchable 3D matrix is a critical step to realizing novel optoelectronic devices such as tunable bulk metal-dielectric optical devices and THz metamaterial devices that are not feasible with alternative techniques. We report a new chemistry method to fabricate high-resolution, 3D silver nanostructures using a femtosecond-laser direct metal writing technique. Previously, only fabrication of 3D polymeric structures or single-/few-layer metal structures was possible. Our method takes advantage of unique gelatin properties to overcome such previous limitations as limited freedom in 3D material design and short sample lifetime. We fabricate more than 15 layers of 3D silver nanostructures with a resolution of less than 100 nm in a stable dielectric matrix that is flexible and has high large transparency that is well-matched for potential applications in the optical and THz metamaterial regimes. This is a single-step process that does not require any further processing. This work will be of interest to those interested in fabrication methods that utilize nonlinear light-matter interactions and the realization of future metamaterials.

  12. Numerical simulation of jet aerodynamics using the three-dimensional Navier-Stokes code PAB3D

    NASA Technical Reports Server (NTRS)

    Pao, S. Paul; Abdol-Hamid, Khaled S.

    1996-01-01

    This report presents a unified method for subsonic and supersonic jet analysis using the three-dimensional Navier-Stokes code PAB3D. The Navier-Stokes code was used to obtain solutions for axisymmetric jets with on-design operating conditions at Mach numbers ranging from 0.6 to 3.0, supersonic jets containing weak shocks and Mach disks, and supersonic jets with nonaxisymmetric nozzle exit geometries. This report discusses computational methods, code implementation, computed results, and comparisons with available experimental data. Very good agreement is shown between the numerical solutions and available experimental data over a wide range of operating conditions. The Navier-Stokes method using the standard Jones-Launder two-equation kappa-epsilon turbulence model can accurately predict jet flow, and such predictions are made without any modification to the published constants for the turbulence model.

  13. Regional 3D Numerical Modeling of the Lithosphere-Mantle System: Implications for Continental Rift-Parallel Surface Velocities

    NASA Astrophysics Data System (ADS)

    Stamps, S.; Bangerth, W.; Hager, B. H.

    2014-12-01

    The East African Rift System (EARS) is an active divergent plate boundary with slow, approximately E-W extension rates ranging from <1-6 mm/yr. Previous work using thin-sheet modeling indicates lithospheric buoyancy dominates the force balance driving large-scale Nubia-Somalia divergence, however GPS observations within the Western Branch of the EARS show along-rift motions that contradict this simple model. Here, we test the role of mantle flow at the rift-scale using our new, regional 3D numerical model based on the open-source code ASPECT. We define a thermal lithosphere with thicknesses that are systematically changed for generic models or based on geophysical constraints in the Western branch (e.g. melting depths, xenoliths, seismic tomography). Preliminary results suggest existing variations in lithospheric thicknesses along-rift in the Western Branch can drive upper mantle flow that is consistent with geodetic observations.

  14. Making Faranoff-Riley I radio sources. I. Numerical hydrodynamic 3D simulations of low-power jets

    NASA Astrophysics Data System (ADS)

    Massaglia, S.; Bodo, G.; Rossi, P.; Capetti, S.; Mignone, A.

    2016-11-01

    Context. Extragalactic radio sources have been classified into two classes, Fanaroff-Riley I and II, which differ in morphology and radio power. Strongly emitting sources belong to the edge-brightened FR II class, and weakly emitting sources to the edge-darkened FR I class. The origin of this dichotomy is not yet fully understood. Numerical simulations are successful in generating FR II morphologies, but they fail to reproduce the diffuse structure of FR Is. Aims: By means of hydro-dynamical 3D simulations of supersonic jets, we investigate how the displayed morphologies depend on the jet parameters. Bow shocks and Mach disks at the jet head, which are probably responsible for the hot spots in the FR II sources, disappear for a jet kinetic power ℒkin ≲ 1043 erg s-1. This threshold compares favorably with the luminosity at which the FR I/FR II transition is observed. Methods: The problem is addressed by numerical means carrying out 3D HD simulations of supersonic jets that propagate in a non-homogeneous medium with the ambient temperature that increases with distance from the jet origin, which maintains constant pressure. Results: The jet energy in the lower power sources, instead of being deposited at the terminal shock, is gradually dissipated by the turbulence. The jets spread out while propagating, and they smoothly decelerate while mixing with the ambient medium and produce the plumes characteristic of FR I objects. Conclusions: Three-dimensionality is an essential ingredient to explore the FR I evolution becausethe properties of turbulence in two and three dimensions are very different, since there is no energy cascade to small scales in two dimensions, and two-dimensional simulations with the same parameters lead to FRII-like behavior.

  15. Evolution of a Directional Wave Spectrum in a 3D Marginal Ice Zone with Random Floe Size Distribution

    NASA Astrophysics Data System (ADS)

    Montiel, F.; Squire, V. A.

    2013-12-01

    A new ocean wave/sea-ice interaction model is proposed that simulates how a directional wave spectrum evolves as it travels through a realistic marginal ice zone (MIZ), where wave/ice dynamics are entirely governed by coherent conservative wave scattering effects. Field experiments conducted by Wadhams et al. (1986) in the Greenland Sea generated important data on wave attenuation in the MIZ and, particularly, on whether the wave spectrum spreads directionally or collimates with distance from the ice edge. The data suggest that angular isotropy, arising from multiple scattering by ice floes, occurs close to the edge and thenceforth dominates wave propagation throughout the MIZ. Although several attempts have been made to replicate this finding theoretically, including by the use of numerical models, none have confronted this problem in a 3D MIZ with fully randomised floe distribution properties. We construct such a model by subdividing the discontinuous ice cover into adjacent infinite slabs of finite width parallel to the ice edge. Each slab contains an arbitrary (but finite) number of circular ice floes with randomly distributed properties. Ice floes are modeled as thin elastic plates with uniform thickness and finite draught. We consider a directional wave spectrum with harmonic time dependence incident on the MIZ from the open ocean, defined as a continuous superposition of plane waves traveling at different angles. The scattering problem within each slab is then solved using Graf's interaction theory for an arbitrary incident directional plane wave spectrum. Using an appropriate integral representation of the Hankel function of the first kind (see Cincotti et al., 1993), we map the outgoing circular wave field from each floe on the slab boundaries into a directional spectrum of plane waves, which characterizes the slab reflected and transmitted fields. Discretizing the angular spectrum, we can obtain a scattering matrix for each slab. Standard recursive

  16. The development of topographic plateaus in an India-Asia-like collision zone using 3D numerical simulations

    NASA Astrophysics Data System (ADS)

    Pusok, Adina E.; Kaus, Boris; Popov, Anton

    2014-05-01

    The Himalayas and the adjacent Tibetan Plateau represent the most remarkable feature of the Earth's surface as the largest region of elevated topography and anomalously thick crust. Understanding the formation and evolution of the Himalayan-Tibetan region has become of high interest in the scientific community and different models have emerged over the last decades. They range from wholescale underthrusting of Indian lithospheric mantle under Tibet, distributed homogeneous shortening or the thin-sheet model, slip-line field model to the lower crustal flow model for the exhumation of the Himalayan units and lateral spreading of the Tibetan plateau. While some of these models have successfully illustrated some of the basic physics of continental collision, none can simultaneously represent active processes such as subduction, underthrusting, delamination, channel flow or extrusion, which are thought to be important during continental convergence, since these mechanisms require the lithosphere to interact with the underlying mantle. As such, 3D numerical models prove to be powerful tools in understanding the dynamics of coupled systems. However, because of yet recent developments and various complexities, the current 3D models simulating the dynamics of continental collision zones have relied on certain explicit assumptions, either focusing on crustal dynamics or slab-mantle dynamics. Here, we employ the parallel 3D code LaMEM (Lithosphere and Mantle Evolution Model), with a finite difference staggered grid solver, which is capable of simulating lithospheric deformation while simultaneously taking mantle flow and an internal free surface into account, which allows for the development of topography. We investigate the way deep processes affect continental tectonics at convergent margins, addressing the role continent subduction and collision have on the future of the subducting and overriding plates, and we discuss the implications these offer for the Asian tectonics

  17. On the numerical simulation of the ablative Rayleigh-Taylor instability in laser-driven ICF targets using the FastRad3D code

    NASA Astrophysics Data System (ADS)

    Bates, Jason; Schmitt, Andrew; Zalesak, Steve

    2015-11-01

    The ablative Rayleigh-Taylor (RT) instability is a key factor in the performance of directly-drive inertial-confinement-fusion (ICF) targets. Although this subject has been studied for quite some time, the accurate simulation of the ablative RT instability has proven to be a challenging task for many radiation hydrodynamics codes, particularly when it comes to capturing the ablatively-stabilized region of the linear dispersion spectrum and modeling ab initio perturbations. In this poster, we present results from recent two-dimensional numerical simulations of the ablative RT instability that were performed using the Eulerian code FastRad3D at the U.S. Naval Research Laboratory. We consider both planar and spherical geometries, low and moderate-Z target materials, different laser wavelengths and where possible, compare our findings with experiment data, linearized theory and/or results from other radiation hydrodynamics codes. Overall, we find that FastRad3D is capable of simulating the ablative RT instability quite accurately, although some uncertainties/discrepancies persist. We discuss these issues, as well as some of the numerical challenges associated with modeling this class of problems. Work supported by U.S. DOE/NNSA.

  18. 3D Micropatterned Surface Inspired by Salvinia molesta via Direct Laser Lithography

    PubMed Central

    2015-01-01

    Biomimetic functional surfaces are attracting increasing attention for their relevant technological applications. Despite these efforts, inherent limitations of microfabrication techniques prevent the replication of complex hierarchical microstructures. Using a 3D laser lithography technique, we fabricated a 3D patterned surface bioinspired to Salvinia molesta leaves. The artificial hairs, with crownlike heads, were reproduced by scaling down (ca. 100 times smaller) the dimensions of natural features, so that microscale hairs with submicrometric resolution were attained. The micropatterned surface, in analogy with the natural model, shows interesting properties in terms of hydrophobicity and air retention when submerged by water, even if realized with a hydrophilic material. Furthermore, we successfully demonstrated the capability to promote localized condensation of water droplets from moisture in the atmosphere. PMID:26558410

  19. 3D Micropatterned Surface Inspired by Salvinia molesta via Direct Laser Lithography.

    PubMed

    Tricinci, Omar; Terencio, Tercio; Mazzolai, Barbara; Pugno, Nicola M; Greco, Francesco; Mattoli, Virgilio

    2015-11-25

    Biomimetic functional surfaces are attracting increasing attention for their relevant technological applications. Despite these efforts, inherent limitations of microfabrication techniques prevent the replication of complex hierarchical microstructures. Using a 3D laser lithography technique, we fabricated a 3D patterned surface bioinspired to Salvinia molesta leaves. The artificial hairs, with crownlike heads, were reproduced by scaling down (ca. 100 times smaller) the dimensions of natural features, so that microscale hairs with submicrometric resolution were attained. The micropatterned surface, in analogy with the natural model, shows interesting properties in terms of hydrophobicity and air retention when submerged by water, even if realized with a hydrophilic material. Furthermore, we successfully demonstrated the capability to promote localized condensation of water droplets from moisture in the atmosphere.

  20. Fast Numerical Algorithms for 3-D Scattering from PEC and Dielectric Random Rough Surfaces in Microwave Remote Sensing

    NASA Astrophysics Data System (ADS)

    Zhang, Lisha

    We present fast and robust numerical algorithms for 3-D scattering from perfectly electrical conducting (PEC) and dielectric random rough surfaces in microwave remote sensing. The Coifman wavelets or Coiflets are employed to implement Galerkin's procedure in the method of moments (MoM). Due to the high-precision one-point quadrature, the Coiflets yield fast evaluations of the most off-diagonal entries, reducing the matrix fill effort from O(N2) to O( N). The orthogonality and Riesz basis of the Coiflets generate well conditioned impedance matrix, with rapid convergence for the conjugate gradient solver. The resulting impedance matrix is further sparsified by the matrix-formed standard fast wavelet transform (SFWT). By properly selecting multiresolution levels of the total transformation matrix, the solution precision can be enhanced while matrix sparsity and memory consumption have not been noticeably sacrificed. The unified fast scattering algorithm for dielectric random rough surfaces can asymptotically reduce to the PEC case when the loss tangent grows extremely large. Numerical results demonstrate that the reduced PEC model does not suffer from ill-posed problems. Compared with previous publications and laboratory measurements, good agreement is observed.

  1. Development of a numerical procedure to map a general 3-d body onto a near-circle

    NASA Technical Reports Server (NTRS)

    Hommel, M. J.

    1986-01-01

    Conformal mapping is a classical technique utilized for solving problems in aerodynamics and hydrodynamics. Conformal mapping is utilized in the construction of grids around airfoils, engine inlets and other aircraft configurations. These shapes are transformed onto a near-circle image for which the equations of fluid motion are discretized on the mapped plane and solved numerically by utilizing the appropriate techniques. In comparison to other grid-generation techniques such as algerbraic or differential type, conformal mapping offers an analytical and accurate form even if the grid deformation is large. One of the most appealing features is that the grid can be constrained to remain orthogonal to the body after the transformation. Hence, the grid is suitable for analyzing the supersonic flow past a blunt object. The associated shock as a coordinate surface adjusts its position in the course of computation until convergence is reached. The present work applied conformal mapping to 3-D bodies with no axis of symmetry such as the Aerobraking Flight Experiment (AFE) vehicle, transforming the AFE shape onto a near-circle image. A numerical procedure and code are used to generate grids around the AFE body.

  2. Tissue-engineered 3-dimensional (3D) microenvironment enhances the direct reprogramming of fibroblasts into cardiomyocytes by microRNAs

    PubMed Central

    Li, Yanzhen; Dal-Pra, Sophie; Mirotsou, Maria; Jayawardena, Tilanthi M.; Hodgkinson, Conrad P.; Bursac, Nenad; Dzau, Victor J.

    2016-01-01

    We have recently shown that a combination of microRNAs, miR combo, can directly reprogram cardiac fibroblasts into functional cardiomyocytes in vitro and in vivo. Reprogramming of cardiac fibroblasts by miR combo in vivo is associated with improved cardiac function following myocardial infarction. However, the efficiency of direct reprogramming in vitro is relatively modest and new strategies beyond the traditional two-dimensional (2D) culture should be identified to improve reprogramming process. Here, we report that a tissue-engineered three-dimensional (3D) hydrogel environment enhanced miR combo reprogramming of neonatal cardiac and tail-tip fibroblasts. This was associated with significantly increased MMPs expression in 3D vs. 2D cultured cells, while pharmacological inhibition of MMPs blocked the effect of the 3D culture on enhanced miR combo mediated reprogramming. We conclude that 3D tissue-engineered environment can enhance the direct reprogramming of fibroblasts to cardiomyocytes via a MMP-dependent mechanism. PMID:27941896

  3. Numerical simulations of full-wave fields and analysis of channel wave characteristics in 3-D coal mine roadway models

    NASA Astrophysics Data System (ADS)

    Yang, Si-Tong; Wei, Jiu-Chuan; Cheng, Jiu-Long; Shi, Long-Qing; Wen, Zhi-Jie

    2016-12-01

    Currently, numerical simulations of seismic channel waves for the advance detection of geological structures in coal mine roadways focus mainly on modeling twodimensional wave fields and therefore cannot accurately simulate three-dimensional (3-D) full-wave fields or seismic records in a full-space observation system. In this study, we use the first-order velocity-stress staggered-grid finite difference algorithm to simulate 3-D full-wave fields with P-wave sources in front of coal mine roadways. We determine the three components of velocity V x, V y, and V z for the same node in 3-D staggered-grid finite difference models by calculating the average value of V y, and V z of the nodes around the same node. We ascertain the wave patterns and their propagation characteristics in both symmetrical and asymmetric coal mine roadway models. Our simulation results indicate that the Rayleigh channel wave is stronger than the Love channel wave in front of the roadway face. The reflected Rayleigh waves from the roadway face are concentrated in the coal seam, release less energy to the roof and floor, and propagate for a longer distance. There are surface waves and refraction head waves around the roadway. In the seismic records, the Rayleigh wave energy is stronger than that of the Love channel wave along coal walls of the roadway, and the interference of the head waves and surface waves with the Rayleigh channel wave is weaker than with the Love channel wave. It is thus difficult to identify the Love channel wave in the seismic records. Increasing the depth of the receivers in the coal walls can effectively weaken the interference of surface waves with the Rayleigh channel wave, but cannot weaken the interference of surface waves with the Love channel wave. Our research results also suggest that the Love channel wave, which is often used to detect geological structures in coal mine stopes, is not suitable for detecting geological structures in front of coal mine roadways

  4. Direct ambient noise tomography for 3-D near surface shear velocity structure: methodology and applications

    NASA Astrophysics Data System (ADS)

    Yao, H.; Fang, H.; Li, C.; Liu, Y.; Zhang, H.; van der Hilst, R. D.; Huang, Y. C.

    2014-12-01

    Ambient noise tomography has provided essential constraints on crustal and uppermost mantle shear velocity structure in global seismology. Recent studies demonstrate that high frequency (e.g., ~ 1 Hz) surface waves between receivers at short distances can be successfully retrieved from ambient noise cross-correlation and then be used for imaging near surface or shallow crustal shear velocity structures. This approach provides important information for strong ground motion prediction in seismically active area and overburden structure characterization in oil and gas fields. Here we propose a new tomographic method to invert all surface wave dispersion data for 3-D variations of shear wavespeed without the intermediate step of phase or group velocity maps.The method uses frequency-dependent propagation paths and a wavelet-based sparsity-constrained tomographic inversion. A fast marching method is used to compute, at each period, surface wave traveltimes and ray paths between sources and receivers. This avoids the assumption of great-circle propagation that is used in most surface wave tomographic studies, but which is not appropriate in complex media. The wavelet coefficients of the velocity model are estimated with an iteratively reweighted least squares (IRLS) algorithm, and upon iterations the surface wave ray paths and the data sensitivity matrix are updated from the newly obtained velocity model. We apply this new method to determine the 3-D near surface wavespeed variations in the Taipei basin of Taiwan, Hefei urban area and a shale and gas production field in China using the high-frequency interstation Rayleigh wave dispersion data extracted from ambient noisecross-correlation. The results reveal strong effects of off-great-circle propagation of high-frequency surface waves in these regions with above 30% shear wavespeed variations. The proposed approach is more efficient and robust than the traditional two-step surface wave tomography for imaging complex

  5. A numerical method for solving the 3D unsteady incompressible Navier Stokes equations in curvilinear domains with complex immersed boundaries

    NASA Astrophysics Data System (ADS)

    Ge, Liang; Sotiropoulos, Fotis

    2007-08-01

    A novel numerical method is developed that integrates boundary-conforming grids with a sharp interface, immersed boundary methodology. The method is intended for simulating internal flows containing complex, moving immersed boundaries such as those encountered in several cardiovascular applications. The background domain (e.g. the empty aorta) is discretized efficiently with a curvilinear boundary-fitted mesh while the complex moving immersed boundary (say a prosthetic heart valve) is treated with the sharp-interface, hybrid Cartesian/immersed-boundary approach of Gilmanov and Sotiropoulos [A. Gilmanov, F. Sotiropoulos, A hybrid cartesian/immersed boundary method for simulating flows with 3d, geometrically complex, moving bodies, Journal of Computational Physics 207 (2005) 457-492.]. To facilitate the implementation of this novel modeling paradigm in complex flow simulations, an accurate and efficient numerical method is developed for solving the unsteady, incompressible Navier-Stokes equations in generalized curvilinear coordinates. The method employs a novel, fully-curvilinear staggered grid discretization approach, which does not require either the explicit evaluation of the Christoffel symbols or the discretization of all three momentum equations at cell interfaces as done in previous formulations. The equations are integrated in time using an efficient, second-order accurate fractional step methodology coupled with a Jacobian-free, Newton-Krylov solver for the momentum equations and a GMRES solver enhanced with multigrid as preconditioner for the Poisson equation. Several numerical experiments are carried out on fine computational meshes to demonstrate the accuracy and efficiency of the proposed method for standard benchmark problems as well as for unsteady, pulsatile flow through a curved, pipe bend. To demonstrate the ability of the method to simulate flows with complex, moving immersed boundaries we apply it to calculate pulsatile, physiological flow

  6. Engineering of In Vitro 3D Capillary Beds by Self-Directed Angiogenic Sprouting

    PubMed Central

    Chan, Juliana M.; Zervantonakis, Ioannis K.; Rimchala, Tharathorn; Polacheck, William J.; Whisler, Jordan; Kamm, Roger D.

    2012-01-01

    In recent years, microfluidic systems have been used to study fundamental aspects of angiogenesis through the patterning of single-layered, linear or geometric vascular channels. In vivo, however, capillaries exist in complex, three-dimensional (3D) networks, and angiogenic sprouting occurs with a degree of unpredictability in all x,y,z planes. The ability to generate capillary beds in vitro that can support thick, biological tissues remains a key challenge to the regeneration of vital organs. Here, we report the engineering of 3D capillary beds in an in vitro microfluidic platform that is comprised of a biocompatible collagen I gel supported by a mechanical framework of alginate beads. The engineered vessels have patent lumens, form robust ∼1.5 mm capillary networks across the devices, and support the perfusion of 1 µm fluorescent beads through them. In addition, the alginate beads offer a modular method to encapsulate and co-culture cells that either promote angiogenesis or require perfusion for cell viability in engineered tissue constructs. This laboratory-constructed vascular supply may be clinically significant for the engineering of capillary beds and higher order biological tissues in a scalable and modular manner. PMID:23226527

  7. 3D Direct Simulation Monte Carlo Modelling of the Inner Gas Coma of Comet 67P/Churyumov-Gerasimenko: A Parameter Study

    NASA Astrophysics Data System (ADS)

    Liao, Y.; Su, C. C.; Marschall, R.; Wu, J. S.; Rubin, M.; Lai, I. L.; Ip, W. H.; Keller, H. U.; Knollenberg, J.; Kührt, E.; Skorov, Y. V.; Thomas, N.

    2016-03-01

    Direct Simulation Monte Carlo (DSMC) is a powerful numerical method to study rarefied gas flows such as cometary comae and has been used by several authors over the past decade to study cometary outflow. However, the investigation of the parameter space in simulations can be time consuming since 3D DSMC is computationally highly intensive. For the target of ESA's Rosetta mission, comet 67P/Churyumov-Gerasimenko, we have identified to what extent modification of several parameters influence the 3D flow and gas temperature fields and have attempted to establish the reliability of inferences about the initial conditions from in situ and remote sensing measurements. A large number of DSMC runs have been completed with varying input parameters. In this work, we present the simulation results and conclude on the sensitivity of solutions to certain inputs. It is found that among cases of water outgassing, the surface production rate distribution is the most influential variable to the flow field.

  8. Experimental and numerical investigation of the 3D SPECT photon detection kernel for non-uniform attenuating media

    NASA Astrophysics Data System (ADS)

    Riauka, Terence A.; Hooper, H. Richard; Gortel, Zbigniew W.

    1996-07-01

    Experimental tests for non-uniform attenuating media are performed to validate theoretical expressions for the photon detection kernel, obtained from a recently proposed analytical theory of photon propagation and detection for SPECT. The theoretical multi-dimensional integral expressions for the photon detection kernel, which are computed numerically, describe the probability that a photon emitted from a given source voxel will trigger detection of a photon at a particular projection pixel. The experiments were performed using a cylindrical water-filled phantom with large cylindrical air-filled inserts to simulate inhomogeneity of the medium. A point-like, a short thin cylindrical and a large cylindrical radiation source of were placed at various positions within the phantom. The values numerically calculated from the theoretical kernel expressions are in very good agreement with the experimentally measured data. The significance of Compton-scattered photons in planar image formation is discussed and highlighted by these results. Using both experimental measurements and the calculated values obtained from the theory, the kernel's size is investigated. This is done by determining the square pixel neighbourhood of the gamma camera that must be connected to a particular radiation source voxel to account for a specific fraction of all counts recorded at all camera pixels. It is shown that the kernel's size is primarily dependent upon the source position and the properties of the attenuating medium through Compton scattering events, with 3D depth-dependent collimator resolution playing an important but secondary role, at least for imaging situations involving parallel hole collimation. By considering small point-like sources within a non-uniform elliptical phantom, approximating the human thorax, it is demonstrated

  9. Direct Comparisons of 2D and 3D Dental Microwear Proxies in Extant Herbivorous and Carnivorous Mammals

    PubMed Central

    DeSantis, Larisa R. G.; Scott, Jessica R.; Schubert, Blaine W.; Donohue, Shelly L.; McCray, Brian M.; Van Stolk, Courtney A.; Winburn, Amanda A.; Greshko, Michael A.; O’Hara, Mackie C.

    2013-01-01

    The analysis of dental microwear is commonly used by paleontologists and anthropologists to clarify the diets of extinct species, including herbivorous and carnivorous mammals. Currently, there are numerous methods employed to quantify dental microwear, varying in the types of microscopes used, magnifications, and the characterization of wear in both two dimensions and three dimensions. Results from dental microwear studies utilizing different methods are not directly comparable and human quantification of wear features (e.g., pits and scratches) introduces interobserver error, with higher error being produced by less experienced individuals. Dental microwear texture analysis (DMTA), which analyzes microwear features in three dimensions, alleviates some of the problems surrounding two-dimensional microwear methods by reducing observer bias. Here, we assess the accuracy and comparability within and between 2D and 3D dental microwear analyses in herbivorous and carnivorous mammals at the same magnification. Specifically, we compare observer-generated 2D microwear data from photosimulations of the identical scanned areas of DMTA in extant African bovids and carnivorans using a scanning white light confocal microscope at 100x magnification. Using this magnification, dental microwear features quantified in 2D were able to separate grazing and frugivorous bovids using scratch frequency; however, DMTA variables were better able to discriminate between disparate dietary niches in both carnivorous and herbivorous mammals. Further, results demonstrate significant interobserver differences in 2D microwear data, with the microwear index remaining the least variable between experienced observers, consistent with prior research. Overall, our results highlight the importance of reducing observer error and analyzing dental microwear in three dimensions in order to consistently interpret diets accurately. PMID:23936506

  10. Light-directing chiral liquid crystal nanostructures: from 1D to 3D.

    PubMed

    Bisoyi, Hari Krishna; Li, Quan

    2014-10-21

    Endowing external, remote, and dynamic control to self-organized superstructures with desired functionalities is a principal driving force in the bottom-up nanofabrication of molecular devices. Light-driven chiral molecular switches or motors in liquid crystal (LC) media capable of self-organizing into optically tunable one-dimensional (1D) and three-dimensional (3D) superstructures represent such an elegant system. As a consequence, photoresponsive cholesteric LCs (CLCs), i.e., self-organized 1D helical superstructures, and LC blue phases (BPs), i.e., self-organized 3D periodic cubic lattices, are emerging as a new generation of multifunctional supramolecular 1D and 3D photonic materials in their own right because of their fundamental academic interest and technological significance. These smart stimuli-responsive materials can be facilely fabricated from achiral LC hosts by the addition of a small amount of a light-driven chiral molecular switch or motor. The photoresponsiveness of these materials is a result of both molecular interaction and geometry changes in the chiral molecular switch upon light irradiation. The doped photoresponsive CLCs undergo light-driven pitch modulation and/or helix inversion, which has many applications in color filters, polarizers, all-optical displays, optical lasers, sensors, energy-saving smart devices, and so on. Recently, we have conceptualized and rationally synthesized different light-driven chiral molecular switches that have very high helical twisting powers (HTPs) and exhibit large changes in HTP in different states, thereby enabling wide phototunability of the systems by the addition of very small amounts of the molecular switches into commercially available achiral LCs. The light-driven chiral molecular switches are based on well-recognized azobenzene, dithienylcyclopentene, and spirooxazine derivatives. We have demonstrated high-resolution and lightweight photoaddressable displays without patterned electronics on

  11. Towards direct head navigation for robot-guided transcranial magnetic stimulation using 3D laserscans: Idea, setup and feasibility.

    PubMed

    Richter, Lars; Bruder, Ralf; Schlaefer, Alexander; Schweikard, Achim

    2010-01-01

    Direct tracking is more robust than tracking that is based on additional markers. 3D laser scans can be used for direct tracking because they result in a 3D data set of surface points of the scanned object. For head-navigated robotized systems, it is crucial to know where the patient's head is positioned relatively to the robot. We present a novel method to use a 3D laserscanner for direct head navigation in the robotized TMS system that places a coil on the patient's head using an industrial robot. First experimental results showed a translational error < 2mm in the robot hand-eye-calibration with the laserscanner. The rotational error was 0.75° and the scaling error < 0.001. Furthermore, we found that the error of a scanned head to a reference head image was < 0.2mm using ICP. These results have shown that a direct head navigation is feasible for the robotized TMS system. Additional effort has to be made in future systems to speed up the compution time for real time capability.

  12. Direct 3D powder printing of biphasic calcium phosphate scaffolds for substitution of complex bone defects.

    PubMed

    Castilho, Miguel; Moseke, Claus; Ewald, Andrea; Gbureck, Uwe; Groll, Jürgen; Pires, Inês; Teßmar, Jörg; Vorndran, Elke

    2014-03-01

    The 3D printing technique based on cement powders is an excellent method for the fabrication of individual and complex bone substitutes even in the case of large defects. The outstanding bone remodeling capacity of biphasic calcium phosphates (BCPs) containing hydroxyapatite (HA) as well as tricalcium phosphate (TCP) in varying ratios makes the adaption of powder systems resulting in BCP materials to this fabrication technique a desirable aim. This study presents the synthesis and characterization of a novel powder system for the 3D printing process, intended for the production of complexly shaped BCP scaffolds by a hydraulic setting reaction of calcium carbonate and TCP with phosphoric acid. The HA/TCP ratio in the specimens could be tailored by the calcium/phosphate ratio of the starting powder. The scaffolds could be fabricated with a dimensional accuracy of >96.5% and a minimal macro pore size of 300 µm. Independent of the phase composition the printed specimens showed a microporosity of approximately 68%, while the compressive strength strongly depended on the chemical composition and increased with rising TCP content in the scaffolds to a maximum of 1.81 MPa. Post-treatment of the scaffolds with a polylactic-co-glycolic acid-solution enhanced the mechanical properties by a factor of 8. In vitro studies showed that all BCP scaffolds were cytocompatible and enhanced the cell viability as well as the cell proliferation, as compared with pure TCP. Cell proliferation is even better on BCP when compared to HA and cell viability is in a similar range on these materials.

  13. Application of Three Unit-Cells Models on Mechanical Analysis of 3D Five-Directional and Full Five-Directional Braided Composites

    NASA Astrophysics Data System (ADS)

    Zhang, Chao; Xu, Xiwu; Chen, Kang

    2013-10-01

    As new lightweight textile material, 3D five directional and full five directional braided composites (5DBC and F5DBC) have tremendous potential applications in the aerospace industry. Before they are used in primary loading-bearing structures, a rational characterization of their mechanical properties is essential. In this paper, three types of unit-cell models corresponding to the interior, surface and corner regions of 5DBC and F5DBC are proposed. By introducing the reasonable boundary conditions, the effective stiffness properties of these two materials are predicted and compared by the three unit-cells models. The detailed mechanical response characteristic of the three unit-cell models is presented and analyzed in various loading cases. Numerical results show good agreement with experiment data, thus validates the proposed simulation method. Moreover, a parametric study is carried out for analyzing the effects of braiding angle and fiber volume fraction on the elastic properties of 5DBC and F5DBC. The obtained results can help designers to optimize the braided composite structures.

  14. Numerical study for the calculation of computer-generated hologram in color holographic 3D projection enabled by modified wavefront recording plane method

    NASA Astrophysics Data System (ADS)

    Chang, Chenliang; Qi, Yijun; Wu, Jun; Yuan, Caojin; Nie, Shouping; Xia, Jun

    2017-03-01

    A method of calculating computer-generated hologram (CGH) for color holographic 3D projection is proposed. A color 3D object is decomposed into red, green and blue components. For each color component, a virtual wavefront recording plane (WRP) is established which is nonuniformly sampled according to the depth map of the 3D object. The hologram of each color component is calculated from the nonuniform sampled WRP using the shifted Fresnel diffraction algorithm. Finally three holograms of RGB components are encoded into one single CGH based on the multiplexing encoding method. The computational cost of CGH generation is reduced by converting diffraction calculation from huge 3D voxels to three 2D planar images. Numerical experimental results show that the CGH generated by our method is capable to project zoomable color 3D object with clear quality.

  15. Insights into the effects of oblique extension on continental rift interaction from 3D analogue and numerical models

    NASA Astrophysics Data System (ADS)

    Zwaan, Frank; Schreurs, Guido; Naliboff, John; Buiter, Susanne J. H.

    2016-12-01

    Continental rifts often develop from linkage of distinct rift segments under varying degrees of extension obliquity. These rift segments arise from rift initiation at non-aligned crustal heterogeneities and need to interact to develop a full-scale rift system. Here, we test the effects of 1) oblique extension and 2) initial heterogeneity (seed) offset on continental rift interaction with the use of an improved analogue model set-up. X-ray computer tomography (CT) techniques are used to analyse the 3D models through time and the results are compared with additional numerical models and natural examples. The experimental results reveal that increasing extension obliquity strongly changes rift segment structures from wide rifts in orthogonal settings to narrower rifts with oblique internal structures under oblique extension conditions to narrow strike-slip dominated systems towards the strike-slip domain. We also find that both decreasing seed offset and increasing extension obliquity promote hard linkage of rift segments through the formation of continuous rift boundary faults at the surface. (Initial) soft linkage through the formation of relay ramps is more likely when seed offset increases or extension is more orthogonal. Rather than linking at depth, the rift boundary faults curve around each other at depth and merge towards the surface to form a continuous trough. Orthogonal extension promotes the formation of intra-rift horsts, which may provide hydrocarbon traps in nature.

  16. 3D Numerical study on the hollow profile polymer extrusion forming based on the gas-assisted technique

    NASA Astrophysics Data System (ADS)

    Ren, Z.; Huang, X. Y.; Liu, H. S.

    2016-07-01

    In this study, gas-assisted extrusion method was introduced into the extrusion of the hollow profiles. To validate the feasibility of the new extrusion method, 3D numerical simulation of the hollow profiles based on gas-assisted technique was carried out by using the finite element method. The Phan-Thien-Tanner (PTT) mode was selected as the construction equation. In the simulations, the physical field distributions of four different extrusion modes were obtained and analyzed. Results showed that the extrudate effect of traditional no gas- assisted mode was poor because the extrudate swell phenomenon is obvious and the physical field values are larger. For the gas-assisted of the inner wall, the extrudate swell of the melt was more obvious than that of the traditional no gas-assisted mode on account of the no-slip boundary condition on the outer wall. For the gas-assisted of the outer wall, the dimple effect of the inner wall is more obvious owing to the no-slip boundary condition on the inner wall. However, the extrusion effect of the double walls gas-assisted mode is very good because of the full-slip effect on the both walls.

  17. Numerical Solution of 3D Poisson-Nernst-Planck Equations Coupled with Classical Density Functional Theory for Modeling Ion and Electron Transport in a Confined Environment

    SciTech Connect

    Meng, Da; Zheng, Bin; Lin, Guang; Sushko, Maria L.

    2014-08-29

    We have developed efficient numerical algorithms for the solution of 3D steady-state Poisson-Nernst-Planck equations (PNP) with excess chemical potentials described by the classical density functional theory (cDFT). The coupled PNP equations are discretized by finite difference scheme and solved iteratively by Gummel method with relaxation. The Nernst-Planck equations are transformed into Laplace equations through the Slotboom transformation. Algebraic multigrid method is then applied to efficiently solve the Poisson equation and the transformed Nernst-Planck equations. A novel strategy for calculating excess chemical potentials through fast Fourier transforms is proposed which reduces computational complexity from O(N2) to O(NlogN) where N is the number of grid points. Integrals involving Dirac delta function are evaluated directly by coordinate transformation which yields more accurate result compared to applying numerical quadrature to an approximated delta function. Numerical results for ion and electron transport in solid electrolyte for Li ion batteries are shown to be in good agreement with the experimental data and the results from previous studies.

  18. Numerical model of water flow and solute accumulation in vertisols using HYDRUS 2D/3D code

    NASA Astrophysics Data System (ADS)

    Weiss, Tomáš; Dahan, Ofer; Turkeltub, Tuvia

    2015-04-01

    Keywords: dessication-crack-induced-salinization, preferential flow, conceptual model, numerical model, vadose zone, vertisols, soil water retention function, HYDRUS 2D/3D Vertisols cover a hydrologically very significant area of semi-arid regions often through which water infiltrates to groundwater aquifers. Understanding of water flow and solute accumulation is thus very relevant to agricultural activity and water resources management. Previous works suggest a conceptual model of dessication-crack-induced-salinization where salinization of sediment in the deep section of the vadose zone (up to 4 m) is induced by subsurface evaporation due to convective air flow in the dessication cracks. It suggests that the salinization is induced by the hydraulic gradient between the dry sediment in the vicinity of cracks (low potential) and the relatively wet sediment further from the main cracks (high potential). This paper presents a modified previously suggested conceptual model and a numerical model. The model uses a simple uniform flow approach but unconventionally prescribes the boundary conditions and the hydraulic parameters of soil. The numerical model is bound to one location close to a dairy farm waste lagoon, but the application of the suggested conceptual model could be possibly extended to all semi-arid regions with vertisols. Simulations were conducted using several modeling approaches with an ultimate goal of fitting the simulation results to the controlling variables measured in the field: temporal variation in water content across thick layer of unsaturated clay sediment (>10 m), sediment salinity and salinity the water draining down the vadose zone to the water table. The development of the model was engineered in several steps; all computed as forward solutions by try-and-error approach. The model suggests very deep instant infiltration of fresh water up to 12 m, which is also supported by the field data. The paper suggests prescribing a special atmospheric

  19. Wavelength-scale light concentrator made by direct 3D laser writing of polymer metamaterials.

    PubMed

    Moughames, J; Jradi, S; Chan, T M; Akil, S; Battie, Y; Naciri, A En; Herro, Z; Guenneau, S; Enoch, S; Joly, L; Cousin, J; Bruyant, A

    2016-10-04

    We report on the realization of functional infrared light concentrators based on a thick layer of air-polymer metamaterial with controlled pore size gradients. The design features an optimum gradient index profile leading to light focusing in the Fresnel zone of the structures for two selected operating wavelength domains near 5.6 and 10.4 μm. The metamaterial which consists in a thick polymer containing air holes with diameters ranging from λ/20 to λ/8 is made using a 3D lithography technique based on the two-photon polymerization of a homemade photopolymer. Infrared imaging of the structures reveals a tight focusing for both structures with a maximum local intensity increase by a factor of 2.5 for a concentrator volume of 1.5 λ(3), slightly limited by the residual absorption of the selected polymer. Such porous and flat metamaterial structures offer interesting perspectives to increase infrared detector performance at the pixel level for imaging or sensing applications.

  20. Wavelength-scale light concentrator made by direct 3D laser writing of polymer metamaterials

    PubMed Central

    Moughames, J.; Jradi, S.; Chan, T. M.; Akil, S.; Battie, Y.; Naciri, A. En; Herro, Z.; Guenneau, S.; Enoch, S.; Joly, L.; Cousin, J.; Bruyant, A.

    2016-01-01

    We report on the realization of functional infrared light concentrators based on a thick layer of air-polymer metamaterial with controlled pore size gradients. The design features an optimum gradient index profile leading to light focusing in the Fresnel zone of the structures for two selected operating wavelength domains near 5.6 and 10.4 μm. The metamaterial which consists in a thick polymer containing air holes with diameters ranging from λ/20 to λ/8 is made using a 3D lithography technique based on the two-photon polymerization of a homemade photopolymer. Infrared imaging of the structures reveals a tight focusing for both structures with a maximum local intensity increase by a factor of 2.5 for a concentrator volume of 1.5 λ3, slightly limited by the residual absorption of the selected polymer. Such porous and flat metamaterial structures offer interesting perspectives to increase infrared detector performance at the pixel level for imaging or sensing applications. PMID:27698476

  1. Wavelength-scale light concentrator made by direct 3D laser writing of polymer metamaterials

    NASA Astrophysics Data System (ADS)

    Moughames, J.; Jradi, S.; Chan, T. M.; Akil, S.; Battie, Y.; Naciri, A. En; Herro, Z.; Guenneau, S.; Enoch, S.; Joly, L.; Cousin, J.; Bruyant, A.

    2016-10-01

    We report on the realization of functional infrared light concentrators based on a thick layer of air-polymer metamaterial with controlled pore size gradients. The design features an optimum gradient index profile leading to light focusing in the Fresnel zone of the structures for two selected operating wavelength domains near 5.6 and 10.4 μm. The metamaterial which consists in a thick polymer containing air holes with diameters ranging from λ/20 to λ/8 is made using a 3D lithography technique based on the two-photon polymerization of a homemade photopolymer. Infrared imaging of the structures reveals a tight focusing for both structures with a maximum local intensity increase by a factor of 2.5 for a concentrator volume of 1.5 λ3, slightly limited by the residual absorption of the selected polymer. Such porous and flat metamaterial structures offer interesting perspectives to increase infrared detector performance at the pixel level for imaging or sensing applications.

  2. 3D Numerical Optimization Modelling of Ivancich landslides (Assisi, Italy) via integration of remote sensing and in situ observations.

    NASA Astrophysics Data System (ADS)

    Castaldo, Raffaele; De Novellis, Vincenzo; Lollino, Piernicola; Manunta, Michele; Tizzani, Pietro

    2015-04-01

    The new challenge that the research in slopes instabilities phenomena is going to tackle is the effective integration and joint exploitation of remote sensing measurements with in situ data and observations to study and understand the sub-surface interactions, the triggering causes, and, in general, the long term behaviour of the investigated landslide phenomenon. In this context, a very promising approach is represented by Finite Element (FE) techniques, which allow us to consider the intrinsic complexity of the mass movement phenomena and to effectively benefit from multi source observations and data. In this context, we perform a three dimensional (3D) numerical model of the Ivancich (Assisi, Central Italy) instability phenomenon. In particular, we apply an inverse FE method based on a Genetic Algorithm optimization procedure, benefitting from advanced DInSAR measurements, retrieved through the full resolution Small Baseline Subset (SBAS) technique, and an inclinometric array distribution. To this purpose we consider the SAR images acquired from descending orbit by the COSMO-SkyMed (CSK) X-band radar constellation, from December 2009 to February 2012. Moreover the optimization input dataset is completed by an array of eleven inclinometer measurements, from 1999 to 2006, distributed along the unstable mass. The landslide body is formed of debris material sliding on a arenaceous marl substratum, with a thin shear band detected using borehole and inclinometric data, at depth ranging from 20 to 60 m. Specifically, we consider the active role of this shear band in the control of the landslide evolution process. A large field monitoring dataset of the landslide process, including at-depth piezometric and geological borehole observations, were available. The integration of these datasets allows us to develop a 3D structural geological model of the considered slope. To investigate the dynamic evolution of a landslide, various physical approaches can be considered

  3. High-resolution electrohydrodynamic jet printing for the direct fabrication of 3D multilayer terahertz metamaterial of high refractive index

    NASA Astrophysics Data System (ADS)

    Teguh Yudistira, Hadi; Pradhipta Tenggara, Ayodya; Oh, Sang Soon; Nguyen, VuDat; Choi, Muhan; Choi, Choon-gi; Byun, Doyoung

    2015-04-01

    The fabrication of 3D metamaterials, such as multilayer structures, is of great interest in practical applications of the metamaterial. Here we present an electrohydrodynamic jet printing technique as a direct fabrication method of 3D multilayer metamaterial. By alignment of the nozzle movement, we could fabricate multiple layers of the metamaterial. Controlling an electrical pulse to make droplets on-demand, we fabricated a high refractive index metamaterial and compared the optical performances of a single layer and multiple layers, with 10 µm width and 5 µm gap of I-shaped meta-atoms on the polyimide substrate. The peak refractive index was 25.7 at 0.46 THz for a four-layer metamaterial.

  4. Pyro-EHD ink-jet printing for direct functionalization of 3D lab-on-chip devices

    NASA Astrophysics Data System (ADS)

    Coppola, S.; Vespini, V.; Bianco, V.; Mecozzi, L.; Olivieri, F.; Todino, M.; Paturzo, M.; Grilli, S.; Ferraro, P.

    2016-03-01

    A challenging request in the fabrication of microfluidics and biomedical microsystems is a flexible ink-jet printing for breaking the rigidity of classical lithography. A pyroelectric-EHD system is presented. The system has proved challenging spatial resolution down to nanoscale, printing of high ordered patterns, capability of dispensing bio-ink as DNA and protein array for biosensing fabrication, single cells printing and direct printing of nanoparticles. With the method proposed high viscous polymers could be easily printed at high resolution in 2D or in 3D configuration. The pyro-EHD process has been proved for the fabrication of biodegradable microneedles for trasndermal drug delivery and 3D optical waveguides.

  5. Variation of repeating earthquake activities depending on their focal depths as inferred from 3-D numerical simulations

    NASA Astrophysics Data System (ADS)

    Ariyoshi, K.; Matsuzawa, T.; Hino, R.; Hasegawa, A.; Hori, T.; Kaneda, Y.

    2007-12-01

    We investigated depth dependence of the slip velocity of small repeating earthquakes using 3-D numerical simulations for a subduction zone involving large and small asperities based on a rate- and state-dependent friction law. In this study, we examined slip at small asperity located at depth of 5, 10 and 15 km. Our results reveal that the postseismic slip of a large earthquake trigger 'slow' slip (with slip velocity lower than that of the spontaneous rupture of the small asperity) rupture of the small asperity located at a depth of 15 km, whereas 'rapid' slip (with higher slip velocity) one at a depth of 5 km where the small asperity usually occur slow repeating earthquakes. In case of the small asperity at a depth of 10 km, all of events are seismic and recurrence intervals are temporally shorter in the passage of postseismic slip. Uchida et al. [2003; GRL] showed that the repeating earthquakes in the NE Japan subduction zones occur constantly, conforming with the rate of the plate convergence in the depth range of > ~40 km. On the other hand, shallow (< ~10 km) focus repeating earthquakes tend to be activated only in the postseismic period of nearby large interplate earthquakes and cumulative slip estimated from them is less than that expected from the plate convergence rate. In general, asperities in the shallower part are more stable than deeper ones because of low effective normal stress. Thus, most of the observed shallow repeating earthquakes may be 'rapid' slip events triggered by the postseismic slip of the neighboring large asperities, and the corresponding small asperities give rise to (aseismic) slow slip events usually.

  6. Effect of Weaving Direction of Conductive Yarns on Electromagnetic Performance of 3D Integrated Microstrip Antenna

    NASA Astrophysics Data System (ADS)

    Xu, Fujun; Yao, Lan; Zhao, Da; Jiang, Muwen; Qiu, Yipping

    2013-10-01

    A three-dimensionally integrated microstrip antenna (3DIMA) is a microstrip antenna woven into the three-dimensional woven composite for load bearing while functioning as an antenna. In this study, the effect of weaving direction of conductive yarns on electromagnetic performance of 3DIMAs are investigated by designing, simulating and experimental testing of two microstrip antennas with different weaving directions of conductive yarns: one has the conductive yarns along the antenna feeding direction (3DIMA-Exp1) and the other has the conductive yarns perpendicular the antenna feeding direction (3DIMA-Exp2). The measured voltage standing wave ratio (VSWR) of 3DIMA-Exp1 was 1.4 at the resonant frequencies of 1.39 GHz; while that of 3DIMA-Exp2 was 1.2 at the resonant frequencies of 1.35 GHz. In addition, the measured radiation pattern of the 3DIMA-Exp1 has smaller back lobe and higher gain value than those of the 3DIMA-Exp2. This result indicates that the waving direction of conductive yarns may have a significant impact on electromagnetic performance of textile structural antennas.

  7. Electric field-controlled directed migration of neural progenitor cells in 2D and 3D environments.

    PubMed

    Meng, Xiaoting; Li, Wenfei; Young, Fraser; Gao, Runchi; Chalmers, Laura; Zhao, Min; Song, Bing

    2012-02-16

    Endogenous electric fields (EFs) occur naturally in vivo and play a critical role during tissue/organ development and regeneration, including that of the central nervous system(1,2). These endogenous EFs are generated by cellular regulation of ionic transport combined with the electrical resistance of cells and tissues. It has been reported that applied EF treatment can promote functional repair of spinal cord injuries in animals and humans(3,4). In particular, EF-directed cell migration has been demonstrated in a wide variety of cell types(5,6), including neural progenitor cells (NPCs)(7,8). Application of direct current (DC) EFs is not a commonly available technique in most laboratories. We have described detailed protocols for the application of DC EFs to cell and tissue cultures previously(5,11). Here we present a video demonstration of standard methods based on a calculated field strength to set up 2D and 3D environments for NPCs, and to investigate cellular responses to EF stimulation in both single cell growth conditions in 2D, and the organotypic spinal cord slice in 3D. The spinal cordslice is an ideal recipient tissue for studying NPC ex vivo behaviours, post-transplantation, because the cytoarchitectonic tissue organization is well preserved within these cultures(9,10). Additionally, this ex vivo model also allows procedures that are not technically feasible to track cells in vivo using time-lapse recording at the single cell level. It is critically essential to evaluate cell behaviours in not only a 2D environment, but also in a 3D organotypic condition which mimicks the in vivo environment. This system will allow high-resolution imaging using cover glass-based dishes in tissue or organ culture with 3D tracking of single cell migration in vitro and ex vivo and can be an intermediate step before moving onto in vivo paradigms.

  8. 3D multidisciplinary numerical model of polychlorinated biphenyl dynamics on the Black Sea north-western shelf

    NASA Astrophysics Data System (ADS)

    Bagaiev, Andrii; Ivanov, Vitaliy

    2014-05-01

    The Black Sea north-western shelf plays a key role in economics of the developing countries such as Ukraine due to food supply, invaluable recreational potential and variety of the relevant maritime shipping routes. On the other hand, a shallow flat shelf is mostly affected by anthropogenic pollution, eutrophication, hypoxia and harmful algae blooms. The research is focused on modeling the transport and transformation of PCBs (PolyChlorinated Biphenyls) because they are exceedingly toxic and highly resistant to degradation, hence cumulatively affect marine ecosystems. Being lipophilic compounds, PCBs demonstrate the distinguishing sorption/desorption activity taking part in the biogeochemical fluxes via the organic matter particles and sediments. In the framework of the research, the coastal in-situ data on PCB concentration in the water column and sediments are processed, visualized and analyzed. It is concluded that the main sources of PCBs are related to the Danube discharge and resuspension from the shallow-water sediments. Developed 3D numerical model is aimed at simulation of PCB contamination of the water column and sediment. The model integrates the full physics hydrodynamic block as well as modules, which describe detritus transport and transformation and PCB dynamics. Three state variables are simulated in PCB transport module: concentration in solute, on the settling particles of detritus and in the top layer of sediments. PCB adsorption/desorption on detritus; the reversible PCB fluxes at the water-sediment boundary; destruction of detritus are taken into consideration. Formalization of PCB deposition/resuspension in the sediments is adapted from Van Rijn's model of the suspended sediment transport. The model was spun up to reconstruct the short term scenario of the instantaneous PCB release from the St. George Arm of Danube. It has been shown that PCB transport on sinking detritus represents the natural buffer mechanism damping the spreading PCB

  9. Stress field sensitivity analysis within Mesozoic successions in the Swiss Alpine foreland using 3-D-geomechanical-numerical models

    NASA Astrophysics Data System (ADS)

    Reiter, Karsten; Hergert, Tobias; Heidbach, Oliver

    2016-04-01

    The in situ stress conditions are of key importance for the evaluation of radioactive waste repositories. In stage two of the Swiss site selection program, the three siting areas of high-level radioactive waste are located in the Alpine foreland in northern Switzerland. The sedimentary succession overlays the basement, consisting of variscan crystalline rocks as well as partly preserved Permo-Carboniferous deposits in graben structures. The Mesozoic sequence represents nearly the complete era and is covered by Cenozoic Molasse deposits as well as Quaternary sediments, mainly in the valleys. The target horizon (designated host rock) is an >100 m thick argillaceous Jurassic deposit (Opalinus Clay). To enlighten the impact of site-specific features on the state of stress within the sedimentary succession, 3-D-geomechanical-numerical models with elasto-plastic rock properties are set up for three potential siting areas. The lateral extent of the models ranges between 12 and 20 km, the vertical extent is up to a depth of 2.5 or 5 km below sea level. The sedimentary sequence plus the basement are separated into 10 to 14 rock mechanical units. The Mesozoic succession is intersected by regional fault zones; two or three of them are present in each model. The numerical problem is solved with the finite element method with a resolution of 100-150 m laterally and 10-30 m vertically. An initial stress state is established for all models taking into account the depth-dependent overconsolidation ratio in Opalinus Clay in northern Switzerland. The influence of topography, rock properties, friction on the faults as well as the impact of tectonic shortening on the state of stress is investigated. The tectonic stress is implemented with lateral displacement boundary conditions, calibrated on stress data that are compiled in Northern Switzerland. The model results indicate that the stress perturbation by the topography is significant to depths greater than the relief contrast. The

  10. Direct Numerical Simulations of Plunging Airfoils

    DTIC Science & Technology

    2010-01-07

    Schmidt and E Turkel, Numerical Solutions of the Euler Equations by Finite Volume Methods Using Runge-Kutta Time-Stepping Schemes, AIAA paper 81-1259...Ω ( p ∂vj ∂xj − σij ∂v i ∂xj ) dV (4) Definition 1 A numerical scheme to solve the viscous Navier-Stokes equations is said to be Kinetic Energy...Direct Numerical Simulations of Plunging Airfoils Yves Allaneau∗ and Antony Jameson† Stanford University, Stanford, California, 94305, USA This paper

  11. Head direction cell firing properties and behavioural performance in 3-D space.

    PubMed

    Taube, Jeffrey S

    2011-02-15

    Previous studies have identified a population of neurons in the rat brain that discharge as a function of the animal's directional heading in the horizontal plane, independent of their location and on-going behaviour. Most studies on head direction (HD) cells have explored how they respond in two-dimensional environments within the horizontal plane. Many animals, however, live and locomote in a three-dimensional world. This paper reviews how HD cells respond when the animal locomotes on a vertical surface or inverted on a ceiling. We found that HD cells fire in a normal, direction-dependent manner when the rat is in the vertical plane, but not when the animal is inverted. Recent behavioural studies reported that rats are capable of accurately performing a navigational task when inverted, but only when the task was simple and started from not more than one or two entry points. Probe trials found that they did not have a flexible, map-like representation of space when inverted. The loss of the directional signal when the animal is in an inverted orientation may account for the absence of the map-like representation. Taken together, these findings indicate that a normal otolith signal contributes an important role to HD cell discharge.

  12. Development of direct-inverse 3-D methods for applied transonic aerodynamic wing design and analysis

    NASA Technical Reports Server (NTRS)

    Carlson, Leland A.

    1989-01-01

    An inverse wing design method was developed around an existing transonic wing analysis code. The original analysis code, TAWFIVE, has as its core the numerical potential flow solver, FLO30, developed by Jameson and Caughey. Features of the analysis code include a finite-volume formulation; wing and fuselage fitted, curvilinear grid mesh; and a viscous boundary layer correction that also accounts for viscous wake thickness and curvature. The development of the inverse methods as an extension of previous methods existing for design in Cartesian coordinates is presented. Results are shown for inviscid wing design cases in super-critical flow regimes. The test cases selected also demonstrate the versatility of the design method in designing an entire wing or discontinuous sections of a wing.

  13. Direct observation of multistep energy transfer in LHCII with fifth-order 3D electronic spectroscopy

    NASA Astrophysics Data System (ADS)

    Zhang, Zhengyang; Lambrev, Petar H.; Wells, Kym L.; Garab, Győző; Tan, Howe-Siang

    2015-07-01

    During photosynthesis, sunlight is efficiently captured by light-harvesting complexes, and the excitation energy is then funneled towards the reaction centre. These photosynthetic excitation energy transfer (EET) pathways are complex and proceed in a multistep fashion. Ultrafast two-dimensional electronic spectroscopy (2DES) is an important tool to study EET processes in photosynthetic complexes. However, the multistep EET processes can only be indirectly inferred by correlating different cross peaks from a series of 2DES spectra. Here we directly observe multistep EET processes in LHCII using ultrafast fifth-order three-dimensional electronic spectroscopy (3DES). We measure cross peaks in 3DES spectra of LHCII that directly indicate energy transfer from excitons in the chlorophyll b (Chl b) manifold to the low-energy level chlorophyll a (Chl a) via mid-level Chl a energy states. This new spectroscopic technique allows scientists to move a step towards mapping the complete complex EET processes in photosynthetic systems.

  14. Direct observation of multistep energy transfer in LHCII with fifth-order 3D electronic spectroscopy

    PubMed Central

    Zhang, Zhengyang; Lambrev, Petar H.; Wells, Kym L.; Garab, Győző; Tan, Howe-Siang

    2015-01-01

    During photosynthesis, sunlight is efficiently captured by light-harvesting complexes, and the excitation energy is then funneled towards the reaction centre. These photosynthetic excitation energy transfer (EET) pathways are complex and proceed in a multistep fashion. Ultrafast two-dimensional electronic spectroscopy (2DES) is an important tool to study EET processes in photosynthetic complexes. However, the multistep EET processes can only be indirectly inferred by correlating different cross peaks from a series of 2DES spectra. Here we directly observe multistep EET processes in LHCII using ultrafast fifth-order three-dimensional electronic spectroscopy (3DES). We measure cross peaks in 3DES spectra of LHCII that directly indicate energy transfer from excitons in the chlorophyll b (Chl b) manifold to the low-energy level chlorophyll a (Chl a) via mid-level Chl a energy states. This new spectroscopic technique allows scientists to move a step towards mapping the complete complex EET processes in photosynthetic systems. PMID:26228055

  15. High-resolution direct 3D printed PLGA scaffolds: print and shrink.

    PubMed

    Chia, Helena N; Wu, Benjamin M

    2014-12-17

    Direct three-dimensional printing (3DP) produces the final part composed of the powder and binder used in fabrication. An advantage of direct 3DP is control over both the microarchitecture and macroarchitecture. Prints which use porogen incorporated in the powder result in high pore interconnectivity, uniform porosity, and defined pore size after leaching. The main limitations of direct 3DP for synthetic polymers are the use of organic solvents which can dissolve polymers used in most printheads and limited resolution due to unavoidable spreading of the binder droplet after contact with the powder. This study describes a materials processing strategy to eliminate the use of organic solvent during the printing process and to improve 3DP resolution by shrinking with a non-solvent plasticizer. Briefly, poly(lactic-co-glycolic acid) (PLGA) powder was prepared by emulsion solvent evaporation to form polymer microparticles. The printing powder was composed of polymer microparticles dry mixed with sucrose particles. After printing with a water-based liquid binder, the polymer microparticles were fused together to form a network by solvent vapor in an enclosed vessel. The sucrose is removed by leaching and the resulting scaffold is placed in a solution of methanol. The methanol acts as a non-solvent plasticizer and allows for polymer chain rearrangement and efficient packing of polymer chains. The resulting volumetric shrinkage is ∼80% at 90% methanol. A complex shape (honey-comb) was designed, printed, and shrunken to demonstrate isotropic shrinking with the ability to reach a final resolution of ∼400 μm. The effect of type of alcohol (i.e. methanol or ethanol), concentration of alcohol, and temperature on volumetric shrinking was studied. This study presents a novel materials processing strategy to overcome the main limitations of direct 3DP to produce high resolution PLGA scaffolds.

  16. Acoustic scattering for 3D multi-directional periodic structures using the boundary element method.

    PubMed

    Karimi, Mahmoud; Croaker, Paul; Kessissoglou, Nicole

    2017-01-01

    An efficient boundary element formulation is proposed to solve three-dimensional exterior acoustic scattering problems with multi-directional periodicity. The multi-directional periodic acoustic problem is represented as a multilevel block Toeplitz matrix. By exploiting the Toeplitz structure, the computational time and storage requirements to construct and to solve the linear system of equations arising from the boundary element formulation are significantly reduced. The generalized minimal residual method is implemented to solve the linear system of equations. To efficiently calculate the matrix-vector product in the iterative algorithm, the original matrix is embedded into a multilevel block circulant matrix. A multi-dimensional discrete Fourier transform is then employed to accelerate the matrix-vector product. The proposed approach is applicable to a periodic acoustic problem for any arbitrary shape of the structure in both full space and half space. Two case studies involving sonic crystal barriers are presented. In the first case study, a sonic crystal barrier comprising rigid cylindrical scatterers is modeled. To demonstrate the effectiveness of the proposed technique, periodicity in one, two, or three directions is examined. In the second case study, the acoustic performance of a sonic crystal barrier with locally resonant C-shaped scatterers is studied.

  17. Nonlinear Response of Cylindrical Shells to Underwater Explosion: Testings and Numerical Prediction Using USA/DYNA3D

    DTIC Science & Technology

    1992-03-01

    COSATI CODES 18 SuBJECT TERMS (Continue on reverse if necessary and identify by block number) FIELD GROUP SUB-GROlP Underwater Explosion 19. ABSTRACT...Continue on reverse if necessary and dentify by block number) Nonlinear 3-D Dynamic Analysis Code (VEC/DYNA3D) has been interfaced with Underwater...whipping mode. Large plastic strains occurred at the center of the cylinder on the reverse side to the explosive and near the ends of the cylinder on

  18. 3D integration of microfluidics and microoptics inside photosensitive glass by femtosecond laser direct writing for photonic biosensing

    NASA Astrophysics Data System (ADS)

    Sugioka, Koji; Wang, Zhongke; Midorikawa, Katsumi

    2008-02-01

    Optical waveguides with a propagation loss of around 0.5 dB/cm are written inside photosensitive Foturan glass by internal modification of refractive index using femtosecond (fs) laser. Integration of the optical wafveguides with a micromirror enables us to bend the guided laser beam at an angle of 90° with a bending loss of less than 0.3 dB. In the meanwhile, a plano-convex microlens is completely embedded inside the Foturan glass chip via formation of a three-dimensional (3D) hollow microstructure using fs laser direct writing followed by heat treatment and successive wet etching. This technique can also be used to fabricate microfluidic devices and therefore realizes 3D integration of microoptical and microfluidic components by one continuous procedure. Subsequently, microoptical waveguides are further integrated into the single glass chip. Demonstration of optical measurements using the integrated microchip reveals that photonic biosensing can be performed with an efficiency increased by a factor of 8 for fluorescence detection and by a factor of 3 for absorption detection.

  19. A 3D numerical study of LO2/GH2 supercritical combustion in the ONERA-Mascotte Test-rig configuration

    NASA Astrophysics Data System (ADS)

    Benmansour, Abdelkrim; Liazid, Abdelkrim; Logerais, Pierre-Olivier; Durastanti, Jean-Félix

    2016-02-01

    Cryogenic propellants LOx/H2 are used at very high pressure in rocket engine combustion. The description of the combustion process in such application is very complex due essentially to the supercritical regime. Ideal gas law becomes invalid. In order to try to capture the average characteristics of this combustion process, numerical computations are performed using a model based on a one-phase multi-component approach. Such work requires fluid properties and a correct definition of the mixture behavior generally described by cubic equations of state with appropriated thermodynamic relations validated against the NIST data. In this study we consider an alternative way to get the effect of real gas by testing the volume-weighted-mixing-law with association of the component transport properties using directly the NIST library data fitting including the supercritical regime range. The numerical simulations are carried out using 3D RANS approach associated with two tested turbulence models, the standard k-Epsilon model and the realizable k-Epsilon one. The combustion model is also associated with two chemical reaction mechanisms. The first one is a one-step generic chemical reaction and the second one is a two-step chemical reaction. The obtained results like temperature profiles, recirculation zones, visible flame lengths and distributions of OH species are discussed.

  20. Seismic Hazard Maps for Seattle, Washington, Incorporating 3D Sedimentary Basin Effects, Nonlinear Site Response, and Rupture Directivity

    USGS Publications Warehouse

    Frankel, Arthur D.; Stephenson, William J.; Carver, David L.; Williams, Robert A.; Odum, Jack K.; Rhea, Susan

    2007-01-01

    This report presents probabilistic seismic hazard maps for Seattle, Washington, based on over 500 3D simulations of ground motions from scenario earthquakes. These maps include 3D sedimentary basin effects and rupture directivity. Nonlinear site response for soft-soil sites of fill and alluvium was also applied in the maps. The report describes the methodology for incorporating source and site dependent amplification factors into a probabilistic seismic hazard calculation. 3D simulations were conducted for the various earthquake sources that can affect Seattle: Seattle fault zone, Cascadia subduction zone, South Whidbey Island fault, and background shallow and deep earthquakes. The maps presented in this document used essentially the same set of faults and distributed-earthquake sources as in the 2002 national seismic hazard maps. The 3D velocity model utilized in the simulations was validated by modeling the amplitudes and waveforms of observed seismograms from five earthquakes in the region, including the 2001 M6.8 Nisqually earthquake. The probabilistic seismic hazard maps presented here depict 1 Hz response spectral accelerations with 10%, 5%, and 2% probabilities of exceedance in 50 years. The maps are based on determinations of seismic hazard for 7236 sites with a spacing of 280 m. The maps show that the most hazardous locations for this frequency band (around 1 Hz) are soft-soil sites (fill and alluvium) within the Seattle basin and along the inferred trace of the frontal fault of the Seattle fault zone. The next highest hazard is typically found for soft-soil sites in the Duwamish Valley south of the Seattle basin. In general, stiff-soil sites in the Seattle basin exhibit higher hazard than stiff-soil sites outside the basin. Sites with shallow bedrock outside the Seattle basin have the lowest estimated hazard for this frequency band.

  1. Fabrication of 3D components by laser-aided direct metal deposition

    NASA Astrophysics Data System (ADS)

    Mazumder, Jyotirmoy; Qi, Huan

    2005-03-01

    Breinan and Kear first reported fabrication of three-dimensional metallic components via layer by layer laser cladding in 1978 and subsequently a patent was issued to Brown et al. in 1982. Recently, various groups are working world wide on different types of layered manufacturing techniques for fabrication of near net shape metallic components. Integration of lasers with multi-axis presently available CNC machines, CAD/CAM, sensors and powder metal delivery through co-axial nozzles along with the laser beam are the main innovations for fabrication of 3-Dimensional components. Continuous corrective measures during the manufacturing process are necessary to fabricate net shape functional parts with close tolerances and acceptable residual stress. The closed loop Direct Metal Deposition(DMD) System, using an optical feedback loop along with a CNC working under the instructions from a CAD/CAM software, indicate that it can produce three dimensional components directly from the CAD data eliminating intermediate machining and reduces final machining considerably. This technology is now being commercialized.

  2. Processing and properties of arsenic trisulfide chalcogenide glasses for direct laser writing of 3D microstructures

    NASA Astrophysics Data System (ADS)

    Schwarz, Casey M.; Williams, Henry E.; Grabill, Chris N.; Lewis, Anna M.; Kuebler, Stephen M.; Gleason, Benn; Richardson, Kathleen A.; Pogrebnyakov, Alexej; Mayer, Theresa S.; Drake, Christina; Rivero-Baleine, Clara

    2014-03-01

    Arsenic trisulfide (As2S3) is a transparent material from ~620 nm to 11 μm with direct applications in sensors, photonic waveguides, and acousto-optics. As2S3 may be thermally deposited to form glassy films of molecular chalcogenide (ChG) clusters. It has been shown that linear and multi-photon exposure can be used to photo-pattern thermally deposited As2S3. Photo-exposure cross-links the film into a network solid. Treating the photo-patterned material with a polarsolvent removes the unexposed material leaving behind a structure that is a negative-tone replica of the photo-pattern. In this work, nano-structure arrays were photo-patterned in As2S3 films by multi-photon direct laser writing (DLW) and the resulting structure, morphology, and chemical composition were characterized and correlated with the conditions of the thermal deposition, patterned irradiation, and etch processing. Raman spectroscopy was used to characterize the chemical structure of the unexposed and photo-exposed material, and near infrared ellipsometry was used to measure the refractive index. Physical characterization including structure size and surface adhesion of nano-scale features is related to the processing conditions.

  3. Development of direct-inverse 3-D methods for applied transonic aerodynamic wing design and analysis

    NASA Technical Reports Server (NTRS)

    Carlson, Leland A.

    1989-01-01

    Progress in the direct-inverse wing design method in curvilinear coordinates has been made. This includes the remedying of a spanwise oscillation problem and the assessment of grid skewness, viscous interaction, and the initial airfoil section on the final design. It was found that, in response to the spanwise oscillation problem that designing at every other spanwise station produced the best results for the cases presented, a smoothly varying grid is especially needed for the accurate design at the wing tip, the boundary layer displacement thicknesses must be included in a successful wing design, the design of high and medium aspect ratio wings is possible with this code, and the final airfoil section designed is fairly independent of the initial section.

  4. Development and validation of a 64 channel front end ASIC for 3D directional detection for MIMAC

    NASA Astrophysics Data System (ADS)

    Richer, J. P.; Bourrion, O.; Bosson, G.; Guillaudin, O.; Mayet, F.; Santos, D.

    2011-11-01

    A front end ASIC has been designed to equip the \\textmu TPC prototype developed for the MIMAC project, which requires 3D reconstruction of low energy particle tracks in order to perform directional detection of galactic Dark Matter. Each ASIC is able to monitor 64 strips of pixels and provides the "Time Over Threshold" information for each of those. These 64 digital informations, sampled at a rate of 50 MHz, can be transferred at 400 MHz by eight LVDS serial links. Eight ASIC were validated on a 2 × 256 strips of pixels prototype.

  5. Numerical simulation of X-wing type biplane flapping wings in 3D using the immersed boundary method.

    PubMed

    Tay, W B; van Oudheusden, B W; Bijl, H

    2014-09-01

    The numerical simulation of an insect-sized 'X-wing' type biplane flapping wing configuration is performed in 3D using an immersed boundary method solver at Reynolds numbers equal to 1000 (1 k) and 5 k, based on the wing's root chord length. This X-wing type flapping configuration draws its inspiration from Delfly, a bio-inspired ornithopter MAV which has two pairs of wings flapping in anti-phase in a biplane configuration. The objective of the present investigation is to assess the aerodynamic performance when the original Delfly flapping wing micro-aerial vehicle (FMAV) is reduced to the size of an insect. Results show that the X-wing configuration gives more than twice the average thrust compared with only flapping the upper pair of wings of the X-wing. However, the X-wing's average thrust is only 40% that of the upper wing flapping at twice the stroke angle. Despite this, the increased stability which results from the smaller lift and moment variation of the X-wing configuration makes it more suited for sharp image capture and recognition. These advantages make the X-wing configuration an attractive alternative design for insect-sized FMAVS compared to the single wing configuration. In the Reynolds number comparison, the vorticity iso-surface plot at a Reynolds number of 5 k revealed smaller, finer vortical structures compared to the simulation at 1 k, due to vortices' breakup. In comparison, the force output difference is much smaller between Re = 1 k and 5 k. Increasing the body inclination angle generates a uniform leading edge vortex instead of a conical one along the wingspan, giving higher lift. Understanding the force variation as the body inclination angle increases will allow FMAV designers to optimize the thrust and lift ratio for higher efficiency under different operational requirements. Lastly, increasing the spanwise flexibility of the wings increases the thrust slightly but decreases the efficiency. The thrust result is similar to one of the

  6. 3D numerical model of the southern polar giant impact for the formation of the Martian dichotomy

    NASA Astrophysics Data System (ADS)

    Leone, Giovanni; Tackley, Paul J.; Gerya, Taras; May, David A.; Zhu, Guizhi

    2013-04-01

    Lack of volcanism and/or crustal flows in the northern lowlands poses serious problems to the hypothesis of formation of the Borealis basin by giant impact in the Northern Polar region of Mars. We use numerical modeling integrated with a geologic and volcanologic study of the surface of Mars to investigate an alternative process of formation that involves a giant impact on the South Pole, resulting in a hemispherical magma pond and resulting thicker crust. We have performed 3D simulations of Martian evolution from the immediate post-impact stage to the present day for different combinations of impactor sizes and compositions, ranging from 900 km radius and sideritic composition (up to 80% radius iron) to 1750 km radius and mesosiderite-type composition (50% radius iron; nickel neglected at the moment). The main reason for considering siderites is the presence of M-type asteroids like 16 Psyche (and several others) in the asteroid belt, the likely remnants of larger parent bodies in the 1-2 AU range which then migrated to their current position after giant impacts with protoplanets. We assume an impactor speed similar to the escape velocity of the target body, consistent with N-body simulations. Our results show that this is a viable formation hypothesis for the southern highlands. Our preferred scenario is of a lunar sized impactor of 1600 km radius with a 70% iron (by radius) fraction, hitting the south Pole at a speed of 5 km/s (the escape velocity of Mars), melting much of the interior and 1/2 of the planetary surface with the creation of a magma ocean that formed the highlands upon cooling and solidification. Regarding timing, we find that this should have happened after 4 Ma after CAI, because before this the strong heating from short-lived radiogenic elements coupled with the thermal anomaly generated by the giant impact would erase by re-melting any newly formed crust. Using a combination of I3ELVIS (immediate post-impact and core formation) and STAGYY (long

  7. 3D direct impacts of urban aerosols on dynamics during the CAPITOUL field experiment

    NASA Astrophysics Data System (ADS)

    Aouizerats, B.; Tulet, P.; Gomes, L.

    2012-12-01

    Evaluating the radiative impacts of aerosol particles is of great interest for understanding atmospheric physics and processes feedbacks. To respond to such objectives, the online fully coupled model Meso-NH is applied to a real case during a two-day Intensive Observation Period (IOP) of the CAPITOUL campaign. The aerosol optical properties are computed from the chemical composition and the size distribution of the particle population, and are compared to observations and analysed at local and regional scales. The differences between two simulations are then studied in order to isolate the direct radiative impacts of aerosols on dynamics. Results show that the aerosol particles generate a forcing on shortwave flux by a decrease of the amount reaching the surface up to 30 Wm-2. The resulting feedbacks lead to a cooling up to 0.6 K on the 2-meter temperature over the city of Toulouse and over the larger 125 km by 125 km area around Toulouse. This cooling is also modeled along the whole boundary layer, leading to a decrease of the boundary layer height up to -50 m during the afternoon and a decrease of the vertical velocities with an average of -3 %.

  8. Strategies for Directing the Structure and Function of 3D Collagen Biomaterials across Length Scales

    PubMed Central

    Walters, Brandan D.; Stegemann, Jan P.

    2013-01-01

    Collagen type I is a widely used natural biomaterial that has found utility in a variety of biological and medical applications. Its well characterized structure and role as an extracellular matrix protein make it a highly relevant material for controlling cell function and mimicking tissue properties. Collagen type I is abundant in a number of tissues, and can be isolated as a purified protein. This review focuses on hydrogel biomaterials made by reconstituting collagen type I from a solubilized form, with an emphasis on in vitro studies in which collagen structure can be controlled. The hierarchical structure of collagen from the nanoscale to the macroscale is described, with an emphasis on how structure is related to function across scales. Methods of reconstituting collagen into hydrogel materials are presented, including molding of macroscopic constructs, creation of microscale modules, and electrospinning of nanoscale fibers. The modification of collagen biomaterials to achieve desired structures and functions is also addressed, with particular emphasis on mechanical control of collagen structure, creation of collagen composite materials, and crosslinking of collagenous matrices. Biomaterials scientists have made remarkable progress in rationally designing collagen-based biomaterials and in applying them to both the study of biology and for therapeutic benefit. This broad review illustrates recent examples of techniques used to control collagen structure, and to thereby direct its biological and mechanical functions. PMID:24012608

  9. Numerical modeling of the 3D dynamics of ultrasound contrast agent microbubbles using the boundary integral method

    NASA Astrophysics Data System (ADS)

    Wang, Qianxi; Manmi, Kawa; Calvisi, Michael L.

    2015-02-01

    Ultrasound contrast agents (UCAs) are microbubbles stabilized with a shell typically of lipid, polymer, or protein and are emerging as a unique tool for noninvasive therapies ranging from gene delivery to tumor ablation. While various models have been developed to describe the spherical oscillations of contrast agents, the treatment of nonspherical behavior has received less attention. However, the nonspherical dynamics of contrast agents are thought to play an important role in therapeutic applications, for example, enhancing the uptake of therapeutic agents across cell membranes and tissue interfaces, and causing tissue ablation. In this paper, a model for nonspherical contrast agent dynamics based on the boundary integral method is described. The effects of the encapsulating shell are approximated by adapting Hoff's model for thin-shell, spherical contrast agents. A high-quality mesh of the bubble surface is maintained by implementing a hybrid approach of the Lagrangian method and elastic mesh technique. The numerical model agrees well with a modified Rayleigh-Plesset equation for encapsulated spherical bubbles. Numerical analyses of the dynamics of UCAs in an infinite liquid and near a rigid wall are performed in parameter regimes of clinical relevance. The oscillation amplitude and period decrease significantly due to the coating. A bubble jet forms when the amplitude of ultrasound is sufficiently large, as occurs for bubbles without a coating; however, the threshold amplitude required to incite jetting increases due to the coating. When a UCA is near a rigid boundary subject to acoustic forcing, the jet is directed towards the wall if the acoustic wave propagates perpendicular to the boundary. When the acoustic wave propagates parallel to the rigid boundary, the jet direction has components both along the wave direction and towards the boundary that depend mainly on the dimensionless standoff distance of the bubble from the boundary. In all cases, the jet

  10. Direct Numerical Simulation of Multiphase Flows with Unstable Interfaces

    NASA Astrophysics Data System (ADS)

    Schillaci, Eugenio; Lehmkuhl, Oriol; Antepara, Oscar; Oliva, Assensi

    2016-09-01

    This paper presents a numerical model that intends to simulate efficiently the surface instability that arise in multiphase flows, typically liquid-gas, both for laminar or turbulent regimes. The model is developed on the in-house computing platform TermoFluids, and operates the finite-volume, direct numerical simulation (DNS) of multiphase flows by means of a conservative level-set method for the interface-capturing. The mesh size is optimized by means of an adaptive mesh refinement (AMR) strategy, that allows the dynamic re-concentration of the mesh in the vicinity of the interfaces between fluids, in order to correctly represent the diverse structures (as ligaments and droplets) that may rise from unstable phenomena. In addition, special attention is given to the discretization of the various terms of the momentum equations, to ensure stability of the flow and correct representation of turbulent vortices. As shown, the method is capable of truthfully simulate the interface phenomena as the Kelvin-Helmholtz instability and the Plateau-Rayleigh instability, both in the case of 2-D and 3-D configurations. Therefore it is suitable for the simulation of complex phenomena such as simulation of air-blast atomization, with several important application in the field of automotive and aerospace engines. A prove is given by our preliminary study of the 3-D coaxial liquid-gas jet.

  11. 3D Numerical Experiments of Lithospheric Transtension Reveal Complex Crustal-Scale Flow and Strain Partitioning in Transdomes

    NASA Astrophysics Data System (ADS)

    Rey, P. F.; Mondy, L. S.; Duclaux, G.; Teyssier, C. P.; Whitney, D. L.

    2015-12-01

    We have used Underworld to perform a series of numerical experiments involving a 256 x 256 x 128 km domain, at a grid resolution of 1.33 km. The kinematic boundary conditions simulate a lithospheric-scale pull-apart setting. We compare the structural and thermal evolution of a model involving a crust of thickness 40 km (TMoho=540ºC) with a model with a crust of thickness 60 km (TMoho=830ºC). We show that in the thick, hot crust model the flow in the pull-apart region is strongly partitioned between the strong upper crust and the weak lower crust. The weak, deep crust flows toward the pull-apart region to isostatically compensate the stretching and thinning of the upper crust. In contrast, the velocity field in the upper crust remains parallel to the imposed direction of extension. In the pull-apart region a transdome, made of two parallel foliation folds (or sub-domes), forms. In the dome, fabrics evolve from strong vertical flattening in between the two sub-domes, to shallow dipping constriction roughly parallel to the direction of extension in the upper part of the transdome.

  12. Direct numerical simulation of hot jets

    NASA Technical Reports Server (NTRS)

    Jacob, Marc C.

    1993-01-01

    The ultimate motivation of this work is to investigate the stability of two dimensional heated jets and its implications for aerodynamic sound generation from data obtained with direct numerical simulations (DNS). As pointed out in our last report, these flows undergo two types of instabilities, convective or absolute, depending on their temperature. We also described the limits of earlier experimental and theoretical studies and explained why a numerical investigation could give us new insight into the physics of these instabilities. The aeroacoustical interest of these flows was also underlined. In order to reach this goal, we first need to succeed in the DNS of heated jets. Our past efforts have been focused on this issue which encountered several difficulties. Our numerical difficulties are directly related to the physical problem we want to investigate since these absolutely or almost absolutely unstable flows are by definition very sensitive to the smallest disturbances and are very likely to reach nonlinear saturation through a numerical feedback mechanism. As a result, it is very difficult to compute a steady laminar solution using a spatial DNS. A steady state was reached only for strongly co-flowed jets, but these flows are almost equivalent to two independent mixing layers. Thus they are far from absolute instability and have much lower growth rates.

  13. Direct Numerical Simulation of the Leidenfrost Effect

    NASA Astrophysics Data System (ADS)

    Tanguy, Sebastien; Rueda Villegas, Lucia; Fluid Mechanics Institute of Toulouse Team

    2015-11-01

    The development of numerical methods for the direct numerical simulation of two-phase flows with phase changes, is the main topic of this study. We propose a novel numerical method which allows dealing with both evaporation and boiling at the interface between a liquid and a gas. For instance it can occur for a Leidenfrost droplet; a water drop levitating above a hot plate which temperature is much higher than the boiling temperature. In this case, boiling occurs in the film of saturated vapor which is entrapped between the bottom of the drop and the plate, whereas the top of the water droplet evaporates in contact of ambient air. Thus, boiling and evaporation can occur simultaneously on different regions of the same liquid interface or occur successively at different times of the history of an evaporating droplet. Usual numerical methods are not able to perform computations in these transient regimes, therefore, we propose in this paper a novel numerical method to achieve this challenging task. Finally, we present several accurate validations against experimental results on Leidenfrost Droplets to strengthen the relevance of this new method.

  14. Ultra-low-cost 3D gaze estimation: an intuitive high information throughput compliment to direct brain-machine interfaces

    NASA Astrophysics Data System (ADS)

    Abbott, W. W.; Faisal, A. A.

    2012-08-01

    Eye movements are highly correlated with motor intentions and are often retained by patients with serious motor deficiencies. Despite this, eye tracking is not widely used as control interface for movement in impaired patients due to poor signal interpretation and lack of control flexibility. We propose that tracking the gaze position in 3D rather than 2D provides a considerably richer signal for human machine interfaces by allowing direct interaction with the environment rather than via computer displays. We demonstrate here that by using mass-produced video-game hardware, it is possible to produce an ultra-low-cost binocular eye-tracker with comparable performance to commercial systems, yet 800 times cheaper. Our head-mounted system has 30 USD material costs and operates at over 120 Hz sampling rate with a 0.5-1 degree of visual angle resolution. We perform 2D and 3D gaze estimation, controlling a real-time volumetric cursor essential for driving complex user interfaces. Our approach yields an information throughput of 43 bits s-1, more than ten times that of invasive and semi-invasive brain-machine interfaces (BMIs) that are vastly more expensive. Unlike many BMIs our system yields effective real-time closed loop control of devices (10 ms latency), after just ten minutes of training, which we demonstrate through a novel BMI benchmark—the control of the video arcade game ‘Pong’.

  15. Ultra-low-cost 3D gaze estimation: an intuitive high information throughput compliment to direct brain-machine interfaces.

    PubMed

    Abbott, W W; Faisal, A A

    2012-08-01

    Eye movements are highly correlated with motor intentions and are often retained by patients with serious motor deficiencies. Despite this, eye tracking is not widely used as control interface for movement in impaired patients due to poor signal interpretation and lack of control flexibility. We propose that tracking the gaze position in 3D rather than 2D provides a considerably richer signal for human machine interfaces by allowing direct interaction with the environment rather than via computer displays. We demonstrate here that by using mass-produced video-game hardware, it is possible to produce an ultra-low-cost binocular eye-tracker with comparable performance to commercial systems, yet 800 times cheaper. Our head-mounted system has 30 USD material costs and operates at over 120 Hz sampling rate with a 0.5-1 degree of visual angle resolution. We perform 2D and 3D gaze estimation, controlling a real-time volumetric cursor essential for driving complex user interfaces. Our approach yields an information throughput of 43 bits s(-1), more than ten times that of invasive and semi-invasive brain-machine interfaces (BMIs) that are vastly more expensive. Unlike many BMIs our system yields effective real-time closed loop control of devices (10 ms latency), after just ten minutes of training, which we demonstrate through a novel BMI benchmark--the control of the video arcade game 'Pong'.

  16. Efficient and robust 3D CT image reconstruction based on total generalized variation regularization using the alternating direction method.

    PubMed

    Chen, Jianlin; Wang, Linyuan; Yan, Bin; Zhang, Hanming; Cheng, Genyang

    2015-01-01

    Iterative reconstruction algorithms for computed tomography (CT) through total variation regularization based on piecewise constant assumption can produce accurate, robust, and stable results. Nonetheless, this approach is often subject to staircase artefacts and the loss of fine details. To overcome these shortcomings, we introduce a family of novel image regularization penalties called total generalized variation (TGV) for the effective production of high-quality images from incomplete or noisy projection data for 3D reconstruction. We propose a new, fast alternating direction minimization algorithm to solve CT image reconstruction problems through TGV regularization. Based on the theory of sparse-view image reconstruction and the framework of augmented Lagrange function method, the TGV regularization term has been introduced in the computed tomography and is transformed into three independent variables of the optimization problem by introducing auxiliary variables. This new algorithm applies a local linearization and proximity technique to make the FFT-based calculation of the analytical solutions in the frequency domain feasible, thereby significantly reducing the complexity of the algorithm. Experiments with various 3D datasets corresponding to incomplete projection data demonstrate the advantage of our proposed algorithm in terms of preserving fine details and overcoming the staircase effect. The computation cost also suggests that the proposed algorithm is applicable to and is effective for CBCT imaging. Theoretical and technical optimization should be investigated carefully in terms of both computation efficiency and high resolution of this algorithm in application-oriented research.

  17. Waveform inversion for 3-D earth structure using the Direct Solution Method implemented on vector-parallel supercomputer

    NASA Astrophysics Data System (ADS)

    Hara, Tatsuhiko

    2004-08-01

    We implement the Direct Solution Method (DSM) on a vector-parallel supercomputer and show that it is possible to significantly improve its computational efficiency through parallel computing. We apply the parallel DSM calculation to waveform inversion of long period (250-500 s) surface wave data for three-dimensional (3-D) S-wave velocity structure in the upper and uppermost lower mantle. We use a spherical harmonic expansion to represent lateral variation with the maximum angular degree 16. We find significant low velocities under south Pacific hot spots in the transition zone. This is consistent with other seismological studies conducted in the Superplume project, which suggests deep roots of these hot spots. We also perform simultaneous waveform inversion for 3-D S-wave velocity and Q structure. Since resolution for Q is not good, we develop a new technique in which power spectra are used as data for inversion. We find good correlation between long wavelength patterns of Vs and Q in the transition zone such as high Vs and high Q under the western Pacific.

  18. Numerical Analysis of Three-Dimensional Cervical Behaviors in Posterior-Oblique Car Collisions Using 3-D Human Whole Body Finite Element Model

    NASA Astrophysics Data System (ADS)

    Kang, Yu-Bong; Jung, Duk-Young; Tanaka, Masatoshi; Yoshino, Nobuyuki; Tsutsumi, Sadami; Ikeuchi, Ken

    Whiplash injuries are most common disorders in rear-end car accidents, while the injury mechanism is yet unknown. Many numerical and experimental approaches have conducted to investigate the cervical behaviors with solely two-dimensional analyses in the sagittal plane. In real accidents, however, as impacts may affect several directions, the cervical behaviors should be evaluated three-dimensionally. Therefore, we evaluated the cervical behaviors under assumption of the posterior-oblique impacts depending on the impact angles with 3-D FE analysis. In addition, we analyzed the stresses occurred in the facet joints considering the relationship with a whiplash disorders. The cervical behaviors showed complex motion combined with axial torsion and lateral bending. The bending angle peaked in the impact at the angle of 15°, and the peak compressive and shear stress on the facet cartilage at C6-C7 increased by 11% and 14%. In the impact at the angle of 30°, the torsion angle peaked at C2-C3, the peak shear stress in the facet cartilage increased by 27%. It showed that the torsion and lateral bending affected the cervical behaviors, and caused the increase of peak stresses on the soft tissues. It is assumed as one of important causes of whiplash injury.

  19. T4 virus-based toolkit for the direct synthesis and 3D organization of metal quantum particles.

    PubMed

    Hou, Li; Gao, Faming; Li, Na

    2010-12-27

    One of the challenges in building superstructures based on small metal particles is producing stable interparticle separation. Herein, we present a novel assembly method based on the use of the T4 bacteriophage capsid as a scaffold for the construction of 3D monodisperse metal-particle arrays. The highly regular and symmetrical protein surface of the T4 capsid allows the site-directed adsorption and subsequent reduction of metal ions, thus permitting the growth of metal particles in situ to enable them to exist at a quantum size with a high degree of monodispersity. Both these characteristics contribute to a great improvement in the electrocatalytic activity of the patterned noble-metal particles. Organized magnetic particles as small as 2-4 nm still maintain an observable ferromagnetic behavior, which makes them promising for a variety of possible biomedical applications.

  20. 3D technology of Sony Bloggie has no advantage in decision-making of tennis serve direction: A randomized placebo-controlled study.

    PubMed

    Liu, Sicong; Ritchie, Jason; Sáenz-Moncaleano, Camilo; Ward, Savanna K; Paulsen, Cody; Klein, Tyler; Gutierrez, Oscar; Tenenbaum, Gershon

    2017-06-01

    This study aimed at exploring whether 3D technology enhances tennis decision-making under the conceptual framework of human performance model. A 3 (skill-level: varsity, club, recreational) × 3 (experimental condition: placebo, weak 3D [W3D], strong 3D [S3D]) between-participant design was used. Allocated to experimental conditions by a skill-level stratified randomization, 105 tennis players judged tennis serve direction from video scenarios and rated their perceptions of enjoyment, flow, and presence during task performance. Results showed that varsity players made more accurate decisions than less skilled ones. Additionally, applying 3D technology to typical video displays reduced tennis players' decision-making accuracy, although wearing the 3D glasses led to a placebo effect that shortened the decision-making reaction time. The unexpected negative effect of 3D technology on decision-making was possibly due to participants being more familiar to W3D than to S3D, and relatedly, a suboptimal task-technology match. Future directions for advancing this area of research are offered. Highlights 3D technology augments binocular depth cues to tradition video displays, and thus results in the attainment of more authentic visual representation. This process enhances task fidelity in researching perceptual-cognitive skills in sports. The paper clarified both conceptual and methodological difficulties in testing 3D technology in sports settings. Namely, the nomenclature of video footage (with/without 3D technology) and the possible placebo effect (arising from wearing glasses of 3D technology) merit researchers' attention. Participants varying in level of domain-specific expertise were randomized into viewing conditions using a placebo-controlled design. Measurement consisted of both participants' subjective experience (i.e., presence, flow, and enjoyment) and objective performance (i.e., accuracy and reaction time) in a decision-making task. Findings revealed that

  1. Fingering convection induced by atomic diffusion in stars: 3D numerical computations and applications to stellar models

    SciTech Connect

    Zemskova, Varvara; Garaud, Pascale; Deal, Morgan; Vauclair, Sylvie

    2014-11-10

    Iron-rich layers are known to form in the stellar subsurface through a combination of gravitational settling and radiative levitation. Their presence, nature, and detailed structure can affect the excitation process of various stellar pulsation modes and must therefore be modeled carefully in order to better interpret Kepler asteroseismic data. In this paper, we study the interplay between atomic diffusion and fingering convection in A-type stars, as well as its role in the establishment and evolution of iron accumulation layers. To do so, we use a combination of three-dimensional idealized numerical simulations of fingering convection (which neglect radiative transfer and complex opacity effects) and one-dimensional realistic stellar models. Using the three-dimensional simulations, we first validate the mixing prescription for fingering convection recently proposed by Brown et al. (within the scope of the aforementioned approximation) and identify what system parameters (total mass of iron, iron diffusivity, thermal diffusivity, etc.) play a role in the overall evolution of the layer. We then implement the Brown et al. prescription in the Toulouse-Geneva Evolution Code to study the evolution of the iron abundance profile beneath the stellar surface. We find, as first discussed by Théado et al., that when the concurrent settling of helium is ignored, this accumulation rapidly causes an inversion in the mean molecular weight profile, which then drives fingering convection. The latter mixes iron with the surrounding material very efficiently, and the resulting iron layer is very weak. However, taking helium settling into account partially stabilizes the iron profile against fingering convection, and a large iron overabundance can accumulate. The opacity also increases significantly as a result, and in some cases it ultimately triggers dynamical convection. The direct effects of radiative acceleration on the dynamics of fingering convection (especially in the

  2. High-resolution 3D numerical modeling of thrust wedges: Influence of décollement strength on transfer zones

    NASA Astrophysics Data System (ADS)

    Ruh, Jonas B.; Gerya, Taras; Burg, Jean-Pierre

    2013-04-01

    mechanics and dynamics of thin-skinned compressible thrust wedges with prescribed offsets in the backstop, i.e., transfer zones, are investigated using a three-dimensional finite difference numerical model with a visco-brittle/plastic rheology. The main questions addressed are as follows: (i) What is the influence of the initial length of the backstop offset and (ii) what is the effect of the frictional strength of the main décollement on the structural evolution of the brittle wedges along such transfer zones? Results show that the shorter the backstop offset, the earlier these two thrust planes connect, forming a curved frontal thrust along the entire width of the model. Younger, in-sequence thrusts are formed parallel to this curved shape. Long backstop offsets produce strongly curved thrust faults around the indenting corner. Simulations with a weak basal friction evolve toward almost linear frontal thrusts orthogonal to the bulk shortening direction. Increased basal drag in models with a strong décollement favors propagation of the backstop offset into a transfer zone up to the frontal thrust. These simulations revealed that surface tapers of the wedge in front of the backstop promontory are larger than what the critical wedge theory predicts, whereas the tapers on the other side of the transfer zone are smaller than analytical values. This difference is amplified with increasing length of the backstop offset and/or strength of the décollement. Modeled surface elevation schemes reproduce well the topographic patterns of natural orogenic systems such as the topographic low along the Minab-Zendan transform/transfer fault between the Zagros and Makran.

  3. GPU-based, parallel-line, omni-directional integration of measured acceleration field to obtain the 3D pressure distribution

    NASA Astrophysics Data System (ADS)

    Wang, Jin; Zhang, Cao; Katz, Joseph

    2016-11-01

    A PIV based method to reconstruct the volumetric pressure field by direct integration of the 3D material acceleration directions has been developed. Extending the 2D virtual-boundary omni-directional method (Omni2D, Liu & Katz, 2013), the new 3D parallel-line omni-directional method (Omni3D) integrates the material acceleration along parallel lines aligned in multiple directions. Their angles are set by a spherical virtual grid. The integration is parallelized on a Tesla K40c GPU, which reduced the computing time from three hours to one minute for a single realization. To validate its performance, this method is utilized to calculate the 3D pressure fields in isotropic turbulence and channel flow using the JHU DNS Databases (http://turbulence.pha.jhu.edu). Both integration of the DNS acceleration as well as acceleration from synthetic 3D particles are tested. Results are compared to other method, e.g. solution to the Pressure Poisson Equation (e.g. PPE, Ghaemi et al., 2012) with Bernoulli based Dirichlet boundary conditions, and the Omni2D method. The error in Omni3D prediction is uniformly low, and its sensitivity to acceleration errors is local. It agrees with the PPE/Bernoulli prediction away from the Dirichlet boundary. The Omni3D method is also applied to experimental data obtained using tomographic PIV, and results are correlated with deformation of a compliant wall. ONR.

  4. Direct numerical simulation of chemically reacting turbulence

    NASA Astrophysics Data System (ADS)

    Miyauchi, Toshio; Tanahashi, Mamoru

    In this paper, we present two results of direct numerical simulation of chemically reacting flows. One is direct numerical simulation of chemically reacting two-dimensional mixing layer and the other is direct numerical simulation of chemically reacting compressible isotropic turbulence. As for the mixing layer, a low Mach number approximation was used to take into account the variable density effects on the flow fields and to clarify the effects of heat release and density difference of a mean flow. In the case of density difference, expansion and baroclinic torque has a negative contribution to the local vorticity transport in the high density side and a positive contribution in the low density side which results in an asymmetric vortical structure structure. Thes density difference suppresses the growth of mixing layer and causes the overshoot of mean velocity only in the high density side which coincides with an experimental result. Coupling effects of heat release and desnity difference are also investigated. As for the homogeneous turbulence, fully compressible Navier-Stokes equations are solved to clarify the interaction between turbulence and chemical reaction in turbulent diffusion flame. The chemical reaction is suppressed by the increase of heat release because of the decrease of density and local Reynolds number. However, the decay of enstrophy with heat release is slower than that without heat release because of strong baroclinic torque which is generated near the reaction zone. Also, large amount of heat release causes increase in turbulent energy through the pressure dilatation term. The pressure dilatation term shows the periodic fluctuation which has an acoustic time scale. The fluctuation is enhanced by the heat release and travels in the turbulent field as pressure and dilatation waves.

  5. 3D Stationary electric current density in a spherical tumor treated with low direct current: an analytical solution.

    PubMed

    Jiménez, Rolando Placeres; Pupo, Ana Elisa Bergues; Cabrales, Jesús Manuel Bergues; Joa, Javier Antonio González; Cabrales, Luis Enrique Bergues; Nava, Juan José Godina; Aguilera, Andrés Ramírez; Mateus, Miguel Angel O'Farril; Jarque, Manuel Verdecia; Brooks, Soraida Candida Acosta

    2011-02-01

    Electrotherapy with direct current delivered through implanted electrodes is used for local control of solid tumors in both preclinical and clinical studies. The aim of this research is to develop a solution method for obtaining a three-dimensional analytical expression for potential and electric current density as functions of direct electric current intensity, differences in conductivities between the tumor and the surrounding healthy tissue, and length, number and polarity of electrodes. The influence of these parameters on electric current density in both media is analyzed. The results show that the electric current density in the tumor is higher than that in the surrounding healthy tissue for any value of these parameters. The conclusion is that the solution method presented in this study is of practical interest because it provides, in a few minutes, a convenient way to visualize in 3D the electric current densities generated by a radial electrode array by means of the adequate selection of direct current intensity, length, number, and polarity of electrodes, and the difference in conductivity between the solid tumor and its surrounding healthy tissue.

  6. 10,000-fold concentration increase in proteins in a cascade microchip using anionic ITP by a 3-D numerical simulation with experimental results.

    PubMed

    Bottenus, Danny; Jubery, Talukder Zaki; Dutta, Prashanta; Ivory, Cornelius F

    2011-02-01

    This paper describes both the experimental application and 3-D numerical simulation of isotachophoresis (ITP) in a 3.2 cm long "cascade" poly(methyl methacrylate) (PMMA) microfluidic chip. The microchip includes 10 × reductions in both the width and depth of the microchannel, which decreases the overall cross-sectional area by a factor of 100 between the inlet (cathode) and outlet (anode). A 3-D numerical simulation of ITP is outlined and is a first example of an ITP simulation in three dimensions. The 3-D numerical simulation uses COMSOL Multiphysics v4.0a to concentrate two generic proteins and monitor protein migration through the microchannel. In performing an ITP simulation on this microchip platform, we observe an increase in concentration by over a factor of more than 10,000 due to the combination of ITP stacking and the reduction in cross-sectional area. Two fluorescent proteins, green fluorescent protein and R-phycoerythrin, were used to experimentally visualize ITP through the fabricated microfluidic chip. The initial concentration of each protein in the sample was 1.995 μg/mL and, after preconcentration by ITP, the final concentrations of the two fluorescent proteins were 32.57 ± 3.63 and 22.81 ± 4.61 mg/mL, respectively. Thus, experimentally the two fluorescent proteins were concentrated by over a factor of 10,000 and show good qualitative agreement with our simulation results.

  7. Direct Numerical Simulation of Combustion Using Principal Component Analysis

    NASA Astrophysics Data System (ADS)

    Owoyele, Opeoluwa; Echekki, Tarek

    2016-11-01

    We investigate the potential of accelerating chemistry integration during the direct numerical simulation (DNS) of complex fuels based on the transport equations of representative scalars that span the desired composition space using principal component analysis (PCA). The transported principal components (PCs) offer significant potential to reduce the computational cost of DNS through a reduction in the number of transported scalars, as well as the spatial and temporal resolution requirements. The strategy is demonstrated using DNS of a premixed methane-air flame in a 2D vortical flow and is extended to the 3D geometry to further demonstrate the computational efficiency of PC transport. The PCs are derived from a priori PCA of a subset of the full thermo-chemical scalars' vector. The PCs' chemical source terms and transport properties are constructed and tabulated in terms of the PCs using artificial neural networks (ANN). Comparison of DNS based on a full thermo-chemical state and DNS based on PC transport based on 6 PCs shows excellent agreement even for species that are not included in the PCA reduction. The transported PCs reproduce some of the salient features of strongly curved and strongly strained flames. The 2D DNS results also show a significant reduction of two orders of magnitude in the computational cost of the simulations, which enables an extension of the PCA approach to 3D DNS under similar computational requirements. This work was supported by the National Science Foundation Grant DMS-1217200.

  8. A unified approach to diffusion direction sensitive slice registration and 3-D DTI reconstruction from moving fetal brain anatomy.

    PubMed

    Fogtmann, Mads; Seshamani, Sharmishtaa; Kroenke, Christopher; Xi Cheng; Chapman, Teresa; Wilm, Jakob; Rousseau, Francois; Studholme, Colin

    2014-02-01

    This paper presents an approach to 3-D diffusion tensor image (DTI) reconstruction from multi-slice diffusion weighted (DW) magnetic resonance imaging acquisitions of the moving fetal brain. Motion scatters the slice measurements in the spatial and spherical diffusion domain with respect to the underlying anatomy. Previous image registration techniques have been described to estimate the between slice fetal head motion, allowing the reconstruction of 3D a diffusion estimate on a regular grid using interpolation. We propose Approach to Unified Diffusion Sensitive Slice Alignment and Reconstruction (AUDiSSAR) that explicitly formulates a process for diffusion direction sensitive DW-slice-to-DTI-volume alignment. This also incorporates image resolution modeling to iteratively deconvolve the effects of the imaging point spread function using the multiple views provided by thick slices acquired in different anatomical planes. The algorithm is implemented using a multi-resolution iterative scheme and multiple real and synthetic data are used to evaluate the performance of the technique. An accuracy experiment using synthetically created motion data of an adult head and an experiment using synthetic motion added to sedated fetal monkey dataset show a significant improvement in motion-trajectory estimation compared to current state-of-the-art approaches. The performance of the method is then evaluated on challenging but clinically typical in utero fetal scans of four different human cases, showing improved rendition of cortical anatomy and extraction of white matter tracts. While the experimental work focuses on DTI reconstruction (second-order tensor model), the proposed reconstruction framework can employ any 5-D diffusion volume model that can be represented by the spatial parameterizations of an orientation distribution function.

  9. A Unified Approach to Diffusion Direction Sensitive Slice Registration and 3-D DTI Reconstruction From Moving Fetal Brain Anatomy

    PubMed Central

    Fogtmann, Mads; Seshamani, Sharmishtaa; Kroenke, Christopher; Cheng, Xi; Chapman, Teresa; Wilm, Jakob; Rousseau, François

    2014-01-01

    This paper presents an approach to 3-D diffusion tensor image (DTI) reconstruction from multi-slice diffusion weighted (DW) magnetic resonance imaging acquisitions of the moving fetal brain. Motion scatters the slice measurements in the spatial and spherical diffusion domain with respect to the underlying anatomy. Previous image registration techniques have been described to estimate the between slice fetal head motion, allowing the reconstruction of 3-D a diffusion estimate on a regular grid using interpolation. We propose Approach to Unified Diffusion Sensitive Slice Alignment and Reconstruction (AUDiSSAR) that explicitly formulates a process for diffusion direction sensitive DW-slice-to-DTI-volume alignment. This also incorporates image resolution modeling to iteratively deconvolve the effects of the imaging point spread function using the multiple views provided by thick slices acquired in different anatomical planes. The algorithm is implemented using a multi-resolution iterative scheme and multiple real and synthetic data are used to evaluate the performance of the technique. An accuracy experiment using synthetically created motion data of an adult head and a experiment using synthetic motion added to sedated fetal monkey dataset show a significant improvement in motion-trajectory estimation compared to a state-of-the-art approaches. The performance of the method is then evaluated on challenging but clinically typical in utero fetal scans of four different human cases, showing improved rendition of cortical anatomy and extraction of white matter tracts. While the experimental work focuses on DTI reconstruction (second-order tensor model), the proposed reconstruction framework can employ any 5-D diffusion volume model that can be represented by the spatial parameterizations of an orientation distribution function. PMID:24108711

  10. A defocus-information-free autostereoscopic three-dimensional (3D) digital reconstruction method using direct extraction of disparity information (DEDI)

    NASA Astrophysics Data System (ADS)

    Li, Da; Cheung, Chifai; Zhao, Xing; Ren, Mingjun; Zhang, Juan; Zhou, Liqiu

    2016-10-01

    Autostereoscopy based three-dimensional (3D) digital reconstruction has been widely applied in the field of medical science, entertainment, design, industrial manufacture, precision measurement and many other areas. The 3D digital model of the target can be reconstructed based on the series of two-dimensional (2D) information acquired by the autostereoscopic system, which consists multiple lens and can provide information of the target from multiple angles. This paper presents a generalized and precise autostereoscopic three-dimensional (3D) digital reconstruction method based on Direct Extraction of Disparity Information (DEDI) which can be used to any transform autostereoscopic systems and provides accurate 3D reconstruction results through error elimination process based on statistical analysis. The feasibility of DEDI method has been successfully verified through a series of optical 3D digital reconstruction experiments on different autostereoscopic systems which is highly efficient to perform the direct full 3D digital model construction based on tomography-like operation upon every depth plane with the exclusion of the defocused information. With the absolute focused information processed by DEDI method, the 3D digital model of the target can be directly and precisely formed along the axial direction with the depth information.

  11. Direct Numerical Simulations of Transient Dispersion

    NASA Astrophysics Data System (ADS)

    Porter, M.; Valdes-Parada, F.; Wood, B.

    2008-12-01

    Transient dispersion is important in many engineering applications, including transport in porous media. A common theoretical approach involves upscaling the micro-scale mass balance equations for convection- diffusion to macro-scale equations that contain effective medium quantities. However, there are a number of assumptions implicit in the various upscaling methods. For example, results obtained from volume averaging are often dependent on a given set of length and time scale constraints. Additionally, a number of the classical models for dispersion do not fully capture the early-time dispersive behavior of the solute for a general set of initial conditions. In this work, we present direct numerical simulations of micro-scale transient mass balance equations for convection-diffusion in both capillary tubes and porous media. Special attention is paid to analysis of the influence of a new time- decaying coefficient that filters the effects of the initial conditions. The direct numerical simulations were compared to results obtained from solving the closure problem associated with volume averaging. These comparisons provide a quantitative measure of the significance of (1) the assumptions implicit in the volume averaging method and (2) the importance of the early-time dispersive behavior of the solute due to various initial conditions.

  12. Direct numerical simulation of incompressible axisymmetric flows

    NASA Technical Reports Server (NTRS)

    Loulou, Patrick

    1994-01-01

    In the present work, we propose to conduct direct numerical simulations (DNS) of incompressible turbulent axisymmetric jets and wakes. The objectives of the study are to understand the fundamental behavior of axisymmetric jets and wakes, which are perhaps the most technologically relevant free shear flows (e.g. combuster injectors, propulsion jet). Among the data to be generated are various statistical quantities of importance in turbulence modeling, like the mean velocity, turbulent stresses, and all the terms in the Reynolds-stress balance equations. In addition, we will be interested in the evolution of large-scale structures that are common in free shear flow. The axisymmetric jet or wake is also a good problem in which to try the newly developed b-spline numerical method. Using b-splines as interpolating functions in the non-periodic direction offers many advantages. B-splines have local support, which leads to sparse matrices that can be efficiently stored and solved. Also, they offer spectral-like accuracy that are C(exp O-1) continuous, where O is the order of the spline used; this means that derivatives of the velocity such as the vorticity are smoothly and accurately represented. For purposes of validation against existing results, the present code will also be able to simulate internal flows (ones that require a no-slip boundary condition). Implementation of no-slip boundary condition is trivial in the context of the b-splines.

  13. 3D numerical simulation of the long range propagation of acoustical shock waves through a heterogeneous and moving medium

    SciTech Connect

    Luquet, David; Marchiano, Régis; Coulouvrat, François

    2015-10-28

    Many situations involve the propagation of acoustical shock waves through flows. Natural sources such as lightning, volcano explosions, or meteoroid atmospheric entries, emit loud, low frequency, and impulsive sound that is influenced by atmospheric wind and turbulence. The sonic boom produced by a supersonic aircraft and explosion noises are examples of intense anthropogenic sources in the atmosphere. The Buzz-Saw-Noise produced by turbo-engine fan blades rotating at supersonic speed also propagates in a fast flow within the engine nacelle. Simulating these situations is challenging, given the 3D nature of the problem, the long range propagation distances relative to the central wavelength, the strongly nonlinear behavior of shocks associated to a wide-band spectrum, and finally the key role of the flow motion. With this in view, the so-called FLHOWARD (acronym for FLow and Heterogeneous One-Way Approximation for Resolution of Diffraction) method is presented with three-dimensional applications. A scalar nonlinear wave equation is established in the framework of atmospheric applications, assuming weak heterogeneities and a slow wind. It takes into account diffraction, absorption and relaxation properties of the atmosphere, quadratic nonlinearities including weak shock waves, heterogeneities of the medium in sound speed and density, and presence of a flow (assuming a mean stratified wind and 3D turbulent ? flow fluctuations of smaller amplitude). This equation is solved in the framework of the one-way method. A split-step technique allows the splitting of the non-linear wave equation into simpler equations, each corresponding to a physical effect. Each sub-equation is solved using an analytical method if possible, and finite-differences otherwise. Nonlinear effects are solved in the time domain, and others in the frequency domain. Homogeneous diffraction is handled by means of the angular spectrum method. Ground is assumed perfectly flat and rigid. Due to the 3D

  14. 3D numerical simulation of the long range propagation of acoustical shock waves through a heterogeneous and moving medium

    NASA Astrophysics Data System (ADS)

    Luquet, David; Marchiano, Régis; Coulouvrat, François

    2015-10-01

    Many situations involve the propagation of acoustical shock waves through flows. Natural sources such as lightning, volcano explosions, or meteoroid atmospheric entries, emit loud, low frequency, and impulsive sound that is influenced by atmospheric wind and turbulence. The sonic boom produced by a supersonic aircraft and explosion noises are examples of intense anthropogenic sources in the atmosphere. The Buzz-Saw-Noise produced by turbo-engine fan blades rotating at supersonic speed also propagates in a fast flow within the engine nacelle. Simulating these situations is challenging, given the 3D nature of the problem, the long range propagation distances relative to the central wavelength, the strongly nonlinear behavior of shocks associated to a wide-band spectrum, and finally the key role of the flow motion. With this in view, the so-called FLHOWARD (acronym for FLow and Heterogeneous One-Way Approximation for Resolution of Diffraction) method is presented with three-dimensional applications. A scalar nonlinear wave equation is established in the framework of atmospheric applications, assuming weak heterogeneities and a slow wind. It takes into account diffraction, absorption and relaxation properties of the atmosphere, quadratic nonlinearities including weak shock waves, heterogeneities of the medium in sound speed and density, and presence of a flow (assuming a mean stratified wind and 3D turbulent ? flow fluctuations of smaller amplitude). This equation is solved in the framework of the one-way method. A split-step technique allows the splitting of the non-linear wave equation into simpler equations, each corresponding to a physical effect. Each sub-equation is solved using an analytical method if possible, and finite-differences otherwise. Nonlinear effects are solved in the time domain, and others in the frequency domain. Homogeneous diffraction is handled by means of the angular spectrum method. Ground is assumed perfectly flat and rigid. Due to the 3D

  15. Numerical simulation and inversion of MT fields in the 3D electric conductivity model of the Vesuvius volcano

    NASA Astrophysics Data System (ADS)

    Spichak, V. V.

    2011-01-01

    Possibilities for three-dimensional (3D) magnetotelluric (MT) sounding of local objects contained in the Earth's crust are estimated in a case study of the magma chamber of the Vesuvius volcano. Stochastic inversion of the model MT data by the Markov Chain Monte Carlo (MCMC) method has shown that the most efficient approach is not simultaneous but successive estimation of the geometry and the depth of the anomaly and the assessment of the conductivity distribution within the anomalous region. A zone of equivalence is revealed between the a priori estimate of the depth of the anomalous zone and the a posteriori distribution of electric conductivity within it. Based on the present estimation and previous results, an algorithm for determination of the parameters of local crustal anomaly is proposed.

  16. PROGRESS IN THE PEELING-BALLOONING MODEL OF ELMS: NUMERICAL STUDIES OF 3D NONLINEAR ELM DYNAMICS

    SciTech Connect

    SNYDER,P.B; WILSON,H.R; XU,X.Q

    2004-11-01

    Nonlinear simulations with the 3D electromagnetic two-fluid BOUT code are employed to study the dynamics of edge localized modes (ELMs) driven by intermediate wavelength peeling-ballooning modes. It is found that the early behavior of the modes is similar to expectations from linear, ideal peeling-ballooning mode theory, with the modes growing linearly at a fraction of the Alfven frequency. In the nonlinear phase, the modes grow explosively, forming a number of extended filaments which propagate rapidly from the outer closed flux region into the open flux region toward the outboard wall. Similarities to non-linear ballooning theory, as well as additional complexities are observed. Comparison to observations reveals a number of similarities. Implications of the simulations and proposals for the dynamics of the full ELM crash are discussed.

  17. Localization of metal targets by time reversal of electromagnetic waves . 3D-numerical and experimental study

    NASA Astrophysics Data System (ADS)

    Benhamouche, Mehdi; Bernard, Laurent; Serhir, Mohammed; Pichon, Lionel; Lesselier, Dominique

    2013-11-01

    This paper proposes a criterion for locating obstacles by time reversal (TR) of electromagnetic (EM) waves based on the analysis of the density of EM energy map in time domain. Contrarily to a monochromatic study of the TR, the wide-band approach requires to determine the instant of the wave focus. This enables us to locate the focal spots that are indicative of the positions. The criterion proposed is compared to the inverse of the minimum entropy criterion as used in the literature [X. Xu, E.L. Miller, C.M. Rappaport, IEEE Trans. Geosci. Remote Sens. 41, 1804 (2003)]. An application for the localization of 3D metal targets is proposed using finite integration technique (FIT) as computational tool at the modeling stage. An experimental validation is presented for canonical three-dimensional configurations with two kinds of metal objects. Contribution to the Topical Issue "Numelec 2012", Edited by Adel Razek.

  18. 3-D geodynamic models of the India-Eurasia collision zone: Guiding numerical models with seismic and MT observations

    NASA Astrophysics Data System (ADS)

    Bischoff, S. H.; Flesch, L. M.

    2015-12-01

    Piecing together the uplift and growth of the Tibetan Plateau requires a robust understanding of the present-day dynamics of the India-Eurasia collision zone. To aid in the understanding of mountain building and plateau growth, we developed a 3D finite element model of the Tibetan Plateau following Flesch and Bendick (2012). Our model is based on the vast collection of published geophysical data and employs COMSOL Multiphysics (www.comsol.com). We assume model material properties from the wide variety of published seismic and MT studies, incorporated with an updated, vertically averaged, effective viscosity distribution from Flesch et al. (2001). We test potential relationships between conductance/seismic velocity and strength (viscosity) by modeling strength difference contacts at imaged interfaces. We quantify fitness of candidate 3D viscosity functions by comparing solved model surface velocities to observed surface velocities inferred from GPS and Quaternary fault slip rates. The model geometry incorporates Earth curvature and extends eastward from 65° to 110°E, northward from 15° to 45°N, and vertically down to 100 km below sea level. The physics of deformation is governed by the Stokes equations describing incompressible Newtonian fluid flow. Boundary conditions consist of free slip across the bottom surface (representing the lithosphere-asthenosphere boundary) and moving edge walls constrained by a GPS-derived, continuous velocity field. Model results indicate a tradeoff between crust and mantle dominant strength. Best-fit models are achieved by a combination of strong crust/upper mantle with additional strain accommodation in localized weak zones.

  19. Comparison of 2D and 3D Numerical Models with Experiments of Tsunami Flow through a Built Environment

    NASA Astrophysics Data System (ADS)

    LeVeque, R. J.; Motley, M. R.

    2015-12-01

    A series of tsunami wave basin experiments of flow through a scale model of Seaside, Oregon have been used as validation data for a 2015 benchmarking workshop hosted by the National Tsunami Mitigation Program, which focused on better understanding the ability of tsunami models to predict flow velocities and inundation depths following a coastal inundation event. As researchers begin to assess the safety of coastal infrastructures, proper assessment of tsunami-induced forces on coastal structures is critical. Hydrodynamic forces on these structures are fundamentally proportional to the local momentum flux of the fluid, and experimental data included momentum flux measurements at many instrumented gauge locations. The GeoClaw tsunami model, which solves the two-dimensional shallow water equations, was compared against other codes during the benchmarking workshop, and more recently a three-dimensional computational fluid dynamics model using the open-source OpenFOAM software has been developed and results from this model are being compared with both the experimental data and the 2D GeoClaw results. In addition, the 3D model allows for computation of fluid forces on the faces of structures, permitting an investigation of the common use of momentum flux as a proxy for these forces. This work aims to assess the potential to apply these momentum flux predictions locally within the model to determine tsunami-induced forces on critical structures. Difficulties in working with these data sets and cross-model comparisons will be discussed. Ultimately, application of the more computationally efficient GeoClaw model, informed by the 3D OpenFOAM models, to predict forces on structures at the community scale can be expected to improve the safety and resilience of coastal communities.

  20. Numerical simulation of perfect fluid flows around complex 3D configurations by a multidomain solver using the MUSCL approach

    NASA Astrophysics Data System (ADS)

    Guillen, Ph.; Borrel, M.; Dormieux, M.

    1990-10-01

    A numerical scheme of the MUSCL type used for the numerical simulation of gas flow of different types around complex configurations is described. Approximate Riemann solvers of the Van Leer, Roc, and Osher types, developed for perfect gas flows are used. These solvers have been extended to non-reactive mixtures of two species and real gas flows by Abgrall, Montagne and Vinokur. The architecture of the code, dictated by constraints in geometrical considerations, computational aspects, the specific nature of the flow, and ergonomy, is described.

  1. 3D numerical modeling of mantle flow, crustal dynamics and magma genesis associated with slab roll-back and tearing: The eastern Mediterranean case

    NASA Astrophysics Data System (ADS)

    Menant, Armel; Sternai, Pietro; Jolivet, Laurent; Guillou-Frottier, Laurent; Gerya, Taras

    2016-05-01

    Interactions between subduction dynamics and magma genesis have been intensely investigated, resulting in several conceptual models derived from geological, geochemical and geophysical data. To provide physico-chemical constraints on these conceptual models, self-consistent numerical simulations containing testable thermo-mechanical parameters are required, especially considering the three-dimensional (3D) natural complexity of subduction systems. Here, we use a 3D high-resolution petrological and thermo-mechanical numerical model to quantify the relative contribution of oceanic and continental subduction/collision, slab roll-back and tearing to magma genesis and transport processes. Our modeling results suggest that the space and time distribution and composition of magmas in the overriding plate is controlled by the 3D slab dynamics and related asthenospheric flow. Moreover, the decrease of the bulk lithospheric strength induced by mantle- and crust-derived magmas promotes the propagation of strike-slip and extensional fault zones through the overriding crust as response to slab roll-back and continental collision. Reduction of the lithosphere/asthenosphere rheological contrast by lithospheric weakening also favors the transmission of velocities from the flowing mantle to the crust. Similarities between our modeling results and the late Cenozoic tectonic and magmatic evolution across the eastern Mediterranean region suggest an efficient control of mantle flow on the magmatic activity in this region, which in turn promotes lithospheric deformation by mantle drag via melt-induced weakening effects.

  2. Numerical analysis of a 3D optical sensor based on single mode fiber to multimode interference graphene design

    NASA Astrophysics Data System (ADS)

    Mutter, Kussay N.; Jafri, Zubir M.; Tan, Kok Chooi

    2016-04-01

    In this paper, the simulation and design of a waveguide for water turbidity sensing are presented. The structure of the proposed sensor uses a 2x2 array of multimode interference (MMI) coupler based on micro graphene waveguide for high sensitivity. The beam propagation method (BPM) are used to efficiently design the sensor structure. The structure is consist of an array of two by two elements of sensors. Each element has three sections of single mode for field input tapered to MMI as the main core sensor without cladding which is graphene based material, and then a single mode fiber as an output. In this configuration MMI responses to any change in the environment. We validate and present the results by implementing the design on a set of sucrose solution and showing how these samples lead to a sensitivity change in the sensor based on the MMI structures. Overall results, the 3D design has a feasible and effective sensing by drawing topographical distribution of suspended particles in the water.

  3. Numerical simulation of suspended sediment concentration by 3D coupled wave-current model in the Oujiang River Estuary, China

    NASA Astrophysics Data System (ADS)

    Xu, Ting; You, Xue-yi

    2017-04-01

    A 3D sediment transport model based on the modified environmental fluid dynamics code (EFDC) and the nearshore waves simulation model (SWAN) is developed to study the change of suspended sediment concentration and bottom shear stress under the actions of pure current and wave-current. After being validated by the field measured data, the proposed sediment transport model is applied in the Oujiang River Estuary, China. The results show that the ratios of both bottom shear stress and suspended sediment concentration of pure current to those of wave-current show a gradually increase from shallow nearshore water to deep open sea. The results also show that the proportion of wave contributions on bottom shear stress and sediment concentration are above 60%, approximately 20-30% and less than 10% for the water depth of less than 5 m, 5-10 m and more than 20 m, respectively. For the waters among islands, the proportion of wave contribution to bottom shear stress and sediment concentration is reduced to 10-20% for -5 m water depth and this is more obvious for the waves of large amplitude. The bottom stress and suspended sediment concentration between islands are mainly controlled by tidal current, and the effect of wave is not significant.

  4. Verification and validation of a parallel 3D direct simulation Monte Carlo solver for atmospheric entry applications

    NASA Astrophysics Data System (ADS)

    Nizenkov, Paul; Noeding, Peter; Konopka, Martin; Fasoulas, Stefanos

    2017-03-01

    The in-house direct simulation Monte Carlo solver PICLas, which enables parallel, three-dimensional simulations of rarefied gas flows, is verified and validated. Theoretical aspects of the method and the employed schemes are briefly discussed. Considered cases include simple reservoir simulations and complex re-entry geometries, which were selected from literature and simulated with PICLas. First, the chemistry module is verified using simple numerical and analytical solutions. Second, simulation results of the rarefied gas flow around a 70° blunted-cone, the REX Free-Flyer as well as multiple points of the re-entry trajectory of the Orion capsule are presented in terms of drag and heat flux. A comparison to experimental measurements as well as other numerical results shows an excellent agreement across the different simulation cases. An outlook on future code development and applications is given.

  5. Verification and validation of a parallel 3D direct simulation Monte Carlo solver for atmospheric entry applications

    NASA Astrophysics Data System (ADS)

    Nizenkov, Paul; Noeding, Peter; Konopka, Martin; Fasoulas, Stefanos

    2016-07-01

    The in-house direct simulation Monte Carlo solver PICLas, which enables parallel, three-dimensional simulations of rarefied gas flows, is verified and validated. Theoretical aspects of the method and the employed schemes are briefly discussed. Considered cases include simple reservoir simulations and complex re-entry geometries, which were selected from literature and simulated with PICLas. First, the chemistry module is verified using simple numerical and analytical solutions. Second, simulation results of the rarefied gas flow around a 70° blunted-cone, the REX Free-Flyer as well as multiple points of the re-entry trajectory of the Orion capsule are presented in terms of drag and heat flux. A comparison to experimental measurements as well as other numerical results shows an excellent agreement across the different simulation cases. An outlook on future code development and applications is given.

  6. Direct numerical simulation of turbulent reacting flows

    SciTech Connect

    Chen, J.H.

    1993-12-01

    The development of turbulent combustion models that reflect some of the most important characteristics of turbulent reacting flows requires knowledge about the behavior of key quantities in well defined combustion regimes. In turbulent flames, the coupling between the turbulence and the chemistry is so strong in certain regimes that is is very difficult to isolate the role played by one individual phenomenon. Direct numerical simulation (DNS) is an extremely useful tool to study in detail the turbulence-chemistry interactions in certain well defined regimes. Globally, non-premixed flames are controlled by two limiting cases: the fast chemistry limit, where the turbulent fluctuations. In between these two limits, finite-rate chemical effects are important and the turbulence interacts strongly with the chemical processes. This regime is important because industrial burners operate in regimes in which, locally the flame undergoes extinction, or is at least in some nonequilibrium condition. Furthermore, these nonequilibrium conditions strongly influence the production of pollutants. To quantify the finite-rate chemistry effect, direct numerical simulations are performed to study the interaction between an initially laminar non-premixed flame and a three-dimensional field of homogeneous isotropic decaying turbulence. Emphasis is placed on the dynamics of extinction and on transient effects on the fine scale mixing process. Differential molecular diffusion among species is also examined with this approach, both for nonreacting and reacting situations. To address the problem of large-scale mixing and to examine the effects of mean shear, efforts are underway to perform large eddy simulations of round three-dimensional jets.

  7. Prescribed 3-D Direct Writing of Suspended Micron/Sub-micron Scale Fiber Structures via a Robotic Dispensing System.

    PubMed

    Yuan, Hanwen; Cambron, Scott D; Keynton, Robert S

    2015-06-12

    A 3-axis dispensing system is utilized to control the initiating and terminating fiber positions and trajectory via the dispensing software. The polymer fiber length and orientation is defined by the spatial positioning of the dispensing system 3-axis stages. The fiber diameter is defined by the prescribed dispense time of the dispensing system valve, the feed rate (the speed at which the stage traverses from an initiating to a terminating position), the gauge diameter of the dispensing tip, the viscosity and surface tension of the polymer solution, and the programmed drawing length. The stage feed rate affects the polymer solution's evaporation rate and capillary breakup of the filaments. The dispensing system consists of a pneumatic valve controller, a droplet-dispensing valve and a dispensing tip. Characterization of the direct write process to determine the optimum combination of factors leads to repeatedly acquiring the desired range of fiber diameters. The advantage of this robotic dispensing system is the ease of obtaining a precise range of micron/sub-micron fibers onto a desired, programmed location via automated process control. Here, the discussed self-assembled micron/sub-micron scale 3D structures have been employed to fabricate suspended structures to create micron/sub-micron fluidic devices and bioengineered scaffolds.

  8. Direct laser-writing of ferroelectric single-crystal waveguide architectures in glass for 3D integrated optics

    PubMed Central

    Stone, Adam; Jain, Himanshu; Dierolf, Volkmar; Sakakura, Masaaki; Shimotsuma, Yasuhiko; Miura, Kiyotaka; Hirao, Kazuyuki; Lapointe, Jerome; Kashyap, Raman

    2015-01-01

    Direct three-dimensional laser writing of amorphous waveguides inside glass has been studied intensely as an attractive route for fabricating photonic integrated circuits. However, achieving essential nonlinear-optic functionality in such devices will also require the ability to create high-quality single-crystal waveguides. Femtosecond laser irradiation is capable of crystallizing glass in 3D, but producing optical-quality single-crystal structures suitable for waveguiding poses unique challenges that are unprecedented in the field of crystal growth. In this work, we use a high angular-resolution electron diffraction method to obtain the first conclusive confirmation that uniform single crystals can be grown inside glass by femtosecond laser writing under optimized conditions. We confirm waveguiding capability and present the first quantitative measurement of power transmission through a laser-written crystal-in-glass waveguide, yielding loss of 2.64 dB/cm at 1530 nm. We demonstrate uniformity of the crystal cross-section down the length of the waveguide and quantify its birefringence. Finally, as a proof-of-concept for patterning more complex device geometries, we demonstrate the use of dynamic phase modulation to grow symmetric crystal junctions with single-pass writing. PMID:25988599

  9. Influence of critical current density on magnetic force of HTSC bulk above PMR with 3D-modeling numerical solutions

    NASA Astrophysics Data System (ADS)

    Lu, Yiyun; Qin, Yujie

    2015-09-01

    Numerical simulations of thermo-electromagnetic properties of a high temperature superconducting (HTS) bulk levitating over a permanent magnetic guideway (PMG) are performed by resorting to the quasistatic approximation of the H-method coupling with the classical description of the heat conduction equation. The numerical resolving codes are practiced with the help of the finite element program generation system (FEPG) platform using finite element method (FEM). The E-J power law is used to describe the electric current nonlinear characteristics of HTS bulk. The simulation results show that the heat conduction and the critical current density are tightly relative to the thermal effects of the HTS bulk over the PMG. The heat intensity which responds to the heat loss of the HTS bulk is mainly distributed at the two bottom-corners of the bulk sample.

  10. Numerical analysis of 3D blood flow and common carotid artery hemodynamics in the carotid artery bifurcation with stenosis.

    PubMed

    Antonova, N; Dong, X; Tosheva, P; Kaliviotis, E; Velcheva, I

    2014-01-01

    The results for blood flow in the carotid artery bifurcation on the basis of numerical simulation of Navier-Stokes equations are presented in this study. Four cases of carotid bifurcation are considered: common carotid artery (CCA) bifurcation without stenoses and cases with one, two and three stenoses are also presented. The results are obtained by performing numerical simulations considering one pulse wave period based on the finite volume discretization of Navier-Stokes equations. The structures of the flow around the bifurcation are obtained and the deformation of the pulse wave from common carotid artery (CCA) to the internal carotid artery (ICA) and external carotid artery (ECA) is traced. The axial velocity and wall shear stress (WSS) distribution and contours are presented considering the characteristic time points. The results of the WSS distribution around the bifurcation allow a prediction of the probable sites of stenosis growth.

  11. Aerosol based direct-write micro-additive fabrication method for sub-mm 3D metal-dielectric structures

    NASA Astrophysics Data System (ADS)

    Rahman, Taibur; Renaud, Luke; Heo, Deuk; Renn, Michael; Panat, Rahul

    2015-10-01

    The fabrication of 3D metal-dielectric structures at sub-mm length scale is highly important in order to realize low-loss passives and GHz wavelength antennas with applications in wearable and Internet-of-Things (IoT) devices. The inherent 2D nature of lithographic processes severely limits the available manufacturing routes to fabricate 3D structures. Further, the lithographic processes are subtractive and require the use of environmentally harmful chemicals. In this letter, we demonstrate an additive manufacturing method to fabricate 3D metal-dielectric structures at sub-mm length scale. A UV curable dielectric is dispensed from an Aerosol Jet system at 10-100 µm length scale and instantaneously cured to build complex 3D shapes at a length scale  <1 mm. A metal nanoparticle ink is then dispensed over the 3D dielectric using a combination of jetting action and tilted dispense head, also using the Aerosol Jet technique and at a length scale 10-100 µm, followed by the nanoparticle sintering. Simulation studies are carried out to demonstrate the feasibility of using such structures as mm-wave antennas. The manufacturing method described in this letter opens up the possibility of fabricating an entirely new class of custom-shaped 3D structures at a sub-mm length scale with potential applications in 3D antennas and passives.

  12. The mechanisms of driving lithospheric deformation in India-Asia collision zone: a perspective from 3-D numerical modeling

    NASA Astrophysics Data System (ADS)

    Yang, Jianfeng; Kaus, Boris

    2016-04-01

    The mechanism of intraplate deformation remains incompletely understood by plate tectonics theory. The India-Asia collision zone is the largest present-day example of continental collision, which makes it an ideal location to study the processes of continental deformation. Existing models of lithospheric deformation are typically quasi two-dimensional and often assume that the lithosphere is a thin viscous sheet, which deforms homogeneously as a result of the collision, or flows above a partially molten lower crust, which explains the exhumation of Himalayan units and lateral spreading of Tibetan plateau. An opposing view is that most deformation localize in shear zones separating less deformed blocks, requiring the lithosphere to have an elasto-plastic rather than a viscous rheology. In order to distinguish which model best fits the observations we develop a 3-D visco-elasto-plastic model, which can model both distributed and highly localized deformation. In our preliminary result, most of the large-scale strike-slips faults including Altyn-Tagh fault, Xianshuihe fault, Red-River fault, Sagaing fault and Jiali fault can be simulated. The topography is consistent with observations that flat plateau in central Tibet and steep, abrupt margins adjacent to Sichuan basin, and gradual topography in southeast Tibet. These models suggest that the localized large-scale strike-slip faults accommodate the continental deformation. These results show the importance of a weak lower crust and topographic effects, as well as the effect of rheology and temperature structure of the lithosphere on the deformation patterns.

  13. Numerical 3D modeling of heat transfer in human tissues for microwave radiometry monitoring of brown fat metabolism

    NASA Astrophysics Data System (ADS)

    Rodrigues, Dario B.; Maccarini, Paolo F.; Salahi, Sara; Colebeck, Erin; Topsakal, Erdem; Pereira, Pedro J. S.; Limão-Vieira, Paulo; Stauffer, Paul R.

    2013-02-01

    Background: Brown adipose tissue (BAT) plays an important role in whole body metabolism and could potentially mediate weight gain and insulin sensitivity. Although some imaging techniques allow BAT detection, there are currently no viable methods for continuous acquisition of BAT energy expenditure. We present a non-invasive technique for long term monitoring of BAT metabolism using microwave radiometry. Methods: A multilayer 3D computational model was created in HFSSTM with 1.5 mm skin, 3-10 mm subcutaneous fat, 200 mm muscle and a BAT region (2-6 cm3) located between fat and muscle. Based on this model, a log-spiral antenna was designed and optimized to maximize reception of thermal emissions from the target (BAT). The power absorption patterns calculated in HFSSTM were combined with simulated thermal distributions computed in COMSOL® to predict radiometric signal measured from an ultra-low-noise microwave radiometer. The power received by the antenna was characterized as a function of different levels of BAT metabolism under cold and noradrenergic stimulation. Results: The optimized frequency band was 1.5-2.2 GHz, with averaged antenna efficiency of 19%. The simulated power received by the radiometric antenna increased 2-9 mdBm (noradrenergic stimulus) and 4-15 mdBm (cold stimulus) corresponding to increased 15-fold BAT metabolism. Conclusions: Results demonstrated the ability to detect thermal radiation from small volumes (2-6 cm3) of BAT located up to 12 mm deep and to monitor small changes (0.5 °C) in BAT metabolism. As such, the developed miniature radiometric antenna sensor appears suitable for non-invasive long term monitoring of BAT metabolism.

  14. 3-D numerical models of viscous flow applied to fold nappes and the Rawil depression in the Helvetic nappe system (western Switzerland)

    NASA Astrophysics Data System (ADS)

    von Tscharner, M.; Schmalholz, S. M.; Epard, J.-L.

    2016-05-01

    The Helvetic nappe system exhibits three-dimensional (3-D) features such as the lateral variation in geometry between the Morcles and Doldenhorn fold nappes or the Rawil depression. We perform 3-D finite element simulations of linear and power-law viscous flow to investigate fold nappe formation during shortening of a half graben with laterally varying thickness. 3-D ellipsoids and corresponding 2-D intersection ellipses are used to quantify finite strain. Fold nappes which formed above a thicker graben have (i) larger amplitudes, (ii) a less sheared and thinned overturned limb, and (iii) a larger thickness than fold nappes formed above a thinner graben. These results agree with observations for the Morcles and Doldenhorn nappes. We also perform 3-D simulations for a tectonic scenario suggested for the evolution of the Rawil depression. The basement is shortened and extended laterally and includes a graben which is oblique to the shortening direction and acts as mechanical weak zone. The graben causes laterally varying basement uplift generating a depression whose amplitude depends on the graben orientation and the stress exponent of basement and sediments. The axial plunge of the depression is smaller (approximately 10°) than the observed plunge (approximately 30°) indicating that additional processes are required to explain the geometry of the Rawil depression.

  15. INS3D - NUMERICAL SOLUTION OF THE INCOMPRESSIBLE NAVIER-STOKES EQUATIONS IN THREE-DIMENSIONAL GENERALIZED CURVILINEAR COORDINATES (IBM VERSION)

    NASA Technical Reports Server (NTRS)

    Kwak, D.

    1994-01-01

    INS3D computes steady-state solutions to the incompressible Navier-Stokes equations. The INS3D approach utilizes pseudo-compressibility combined with an approximate factorization scheme. This computational fluid dynamics (CFD) code has been verified on problems such as flow through a channel, flow over a backwardfacing step and flow over a circular cylinder. Three dimensional cases include flow over an ogive cylinder, flow through a rectangular duct, wind tunnel inlet flow, cylinder-wall juncture flow and flow through multiple posts mounted between two plates. INS3D uses a pseudo-compressibility approach in which a time derivative of pressure is added to the continuity equation, which together with the momentum equations form a set of four equations with pressure and velocity as the dependent variables. The equations' coordinates are transformed for general three dimensional applications. The equations are advanced in time by the implicit, non-iterative, approximately-factored, finite-difference scheme of Beam and Warming. The numerical stability of the scheme depends on the use of higher-order smoothing terms to damp out higher-frequency oscillations caused by second-order central differencing. The artificial compressibility introduces pressure (sound) waves of finite speed (whereas the speed of sound would be infinite in an incompressible fluid). As the solution converges, these pressure waves die out, causing the derivation of pressure with respect to time to approach zero. Thus, continuity is satisfied for the incompressible fluid in the steady state. Computational efficiency is achieved using a diagonal algorithm. A block tri-diagonal option is also available. When a steady-state solution is reached, the modified continuity equation will satisfy the divergence-free velocity field condition. INS3D is capable of handling several different types of boundaries encountered in numerical simulations, including solid-surface, inflow and outflow, and far

  16. INS3D - NUMERICAL SOLUTION OF THE INCOMPRESSIBLE NAVIER-STOKES EQUATIONS IN THREE-DIMENSIONAL GENERALIZED CURVILINEAR COORDINATES (DEC RISC ULTRIX VERSION)

    NASA Technical Reports Server (NTRS)

    Biyabani, S. R.

    1994-01-01

    INS3D computes steady-state solutions to the incompressible Navier-Stokes equations. The INS3D approach utilizes pseudo-compressibility combined with an approximate factorization scheme. This computational fluid dynamics (CFD) code has been verified on problems such as flow through a channel, flow over a backwardfacing step and flow over a circular cylinder. Three dimensional cases include flow over an ogive cylinder, flow through a rectangular duct, wind tunnel inlet flow, cylinder-wall juncture flow and flow through multiple posts mounted between two plates. INS3D uses a pseudo-compressibility approach in which a time derivative of pressure is added to the continuity equation, which together with the momentum equations form a set of four equations with pressure and velocity as the dependent variables. The equations' coordinates are transformed for general three dimensional applications. The equations are advanced in time by the implicit, non-iterative, approximately-factored, finite-difference scheme of Beam and Warming. The numerical stability of the scheme depends on the use of higher-order smoothing terms to damp out higher-frequency oscillations caused by second-order central differencing. The artificial compressibility introduces pressure (sound) waves of finite speed (whereas the speed of sound would be infinite in an incompressible fluid). As the solution converges, these pressure waves die out, causing the derivation of pressure with respect to time to approach zero. Thus, continuity is satisfied for the incompressible fluid in the steady state. Computational efficiency is achieved using a diagonal algorithm. A block tri-diagonal option is also available. When a steady-state solution is reached, the modified continuity equation will satisfy the divergence-free velocity field condition. INS3D is capable of handling several different types of boundaries encountered in numerical simulations, including solid-surface, inflow and outflow, and far

  17. Development of a numerical simulator of human swallowing using a particle method (Part 2. Evaluation of the accuracy of a swallowing simulation using the 3D MPS method).

    PubMed

    Kamiya, Tetsu; Toyama, Yoshio; Michiwaki, Yukihiro; Kikuchi, Takahiro

    2013-01-01

    The aim of this study was to develop and evaluate the accuracy of a three-dimensional (3D) numerical simulator of the swallowing action using the 3D moving particle simulation (MPS) method, which can simulate splashes and rapid changes in the free surfaces of food materials. The 3D numerical simulator of the swallowing action using the MPS method was developed based on accurate organ models, which contains forced transformation by elapsed time. The validity of the simulation results were evaluated qualitatively based on comparisons with videofluorography (VF) images. To evaluate the validity of the simulation results quantitatively, the normalized brightness around the vallecula was used as the evaluation parameter. The positions and configurations of the food bolus during each time step were compared in the simulated and VF images. The simulation results corresponded to the VF images during each time step in the visual evaluations, which suggested that the simulation was qualitatively correct. The normalized brightness of the simulated and VF images corresponded exactly at all time steps. This showed that the simulation results, which contained information on changes in the organs and the food bolus, were numerically correct. Based on these results, the accuracy of this simulator was high and it could be used to study the mechanism of disorders that cause dysphasia. This simulator also calculated the shear rate at a specific point and the timing with Newtonian and non-Newtonian fluids. We think that the information provided by this simulator could be useful for development of food products, medicines, and in rehabilitation facilities.

  18. A coupled 3D-1D numerical monodomain solver for cardiac electrical activation in the myocardium with detailed Purkinje network

    NASA Astrophysics Data System (ADS)

    Vergara, Christian; Lange, Matthias; Palamara, Simone; Lassila, Toni; Frangi, Alejandro F.; Quarteroni, Alfio

    2016-03-01

    We present a model for the electrophysiology in the heart to handle the electrical propagation through the Purkinje system and in the myocardium, with two-way coupling at the Purkinje-muscle junctions. In both the subproblems the monodomain model is considered, whereas at the junctions a resistor element is included that induces an orthodromic propagation delay from the Purkinje network towards the heart muscle. We prove a sufficient condition for convergence of a fixed-point iterative algorithm to the numerical solution of the coupled problem. Numerical comparison of activation patterns is made with two different combinations of models for the coupled Purkinje network/myocardium system, the eikonal/eikonal and the monodomain/monodomain models. Test cases are investigated for both physiological and pathological activation of a model left ventricle. Finally, we prove the reliability of the monodomain/monodomain coupling on a realistic scenario. Our results underlie the importance of using physiologically realistic Purkinje-trees with propagation solved using the monodomain model for simulating cardiac activation.

  19. Numerical simulations - Some results for the 2- and 3-D Hubbard models and a 2-D electron phonon model

    NASA Technical Reports Server (NTRS)

    Scalapino, D. J.; Sugar, R. L.; White, S. R.; Bickers, N. E.; Scalettar, R. T.

    1989-01-01

    Numerical simulations on the half-filled three-dimensional Hubbard model clearly show the onset of Neel order. Simulations of the two-dimensional electron-phonon Holstein model show the competition between the formation of a Peierls-CDW state and a superconducting state. However, the behavior of the partly filled two-dimensional Hubbard model is more difficult to determine. At half-filling, the antiferromagnetic correlations grow as T is reduced. Doping away from half-filling suppresses these correlations, and it is found that there is a weak attractive pairing interaction in the d-wave channel. However, the strength of the pair field susceptibility is weak at the temperatures and lattice sizes that have been simulated, and the nature of the low-temperature state of the nearly half-filled Hubbard model remains open.

  20. 3D numerical modeling of the lateral transition between viscous overthrusting and folding with application to the Helvetic nappe system

    NASA Astrophysics Data System (ADS)

    Spitz, Richard; Schmalholz, Stefan; Kaus, Boris

    2016-04-01

    The Helvetic nappe system of the European Alps is generally described as a complex of fold and thrust belts. While the overall geology of the system has been studied in detail, the understanding of the tectonic development and mechanical interconnection between overthrusting and folding is still incomplete. One clue comes from the mechanical stratigraphy and the corresponding lateral transition from overthrusting to folding, which is characteristic for the Helvetic nappe system. We employ a three-dimensional numerical model with linear and non-linear viscous rheology to investigate the control of the lateral variation in the thickness of a weak detachment horizon on the transition from folding to overthrusting during continental shortening. The model configuration is based on published work based on 2D numerical simulations. The simulations are conducted with the three-dimensional staggered-grid finite difference code LaMEM (Lithosphere and Mantle Evolution Model), which allows for coupled nonlinear thermo-mechanical modeling of lithospheric deformation with visco-elasto-plastic rheology and computation on massive parallel machines. Our model configuration consists of a stiff viscous layer, with a pre-existing weak zone, resting within a weaker viscous matrix. The reference viscosity ratio μL/μM (for the same strain rate) between the layer and matrix ranges from 10 to 200. The simulations were run with several distinct initial geometries by altering the thickness of the detachment horizon below the stiff layer across the configurations. Shortening with a constant bulk rate is induced by the prescription of a horizontal velocity on one side of the model. The first results of our simulations highlight the general importance of the initial geometry on the lateral transition from overthrusting to folding. Additionally, models with a stepwise lateral variation of the detachment horizon indicate a fold development orthogonal to the main compressional axis.

  1. Using a magnetite/thermoplastic composite in 3D printing of direct replacements for commercially available flow sensors

    NASA Astrophysics Data System (ADS)

    Leigh, S. J.; Purssell, C. P.; Billson, D. R.; Hutchins, D. A.

    2014-09-01

    Flow sensing is an essential technique required for a wide range of application environments ranging from liquid dispensing to utility monitoring. A number of different methodologies and deployment strategies have been devised to cover the diverse range of potential application areas. The ability to easily create new bespoke sensors for new applications is therefore of natural interest. Fused deposition modelling is a 3D printing technology based upon the fabrication of 3D structures in a layer-by-layer fashion using extruded strands of molten thermoplastic. The technology was developed in the late 1980s but has only recently come to more wide-scale attention outside of specialist applications and rapid prototyping due to the advent of low-cost 3D printing platforms such as the RepRap. Due to the relatively low-cost of the printers and feedstock materials, these printers are ideal candidates for wide-scale installation as localized manufacturing platforms to quickly produce replacement parts when components fail. One of the current limitations with the technology is the availability of functional printing materials to facilitate production of complex functional 3D objects and devices beyond mere concept prototypes. This paper presents the formulation of a simple magnetite nanoparticle-loaded thermoplastic composite and its incorporation into a 3D printed flow-sensor in order to mimic the function of a commercially available flow-sensing device. Using the multi-material printing capability of the 3D printer allows a much smaller amount of functional material to be used in comparison to the commercial flow sensor by only placing the material where it is specifically required. Analysis of the printed sensor also revealed a much more linear response to increasing flow rate of water showing that 3D printed devices have the potential to at least perform as well as a conventionally produced sensor.

  2. Direct numerical simulation of particle alignment in viscoelastic fluids

    NASA Astrophysics Data System (ADS)

    Hulsen, Martien; Jaensson, Nick; Anderson, Patrick

    2016-11-01

    Rigid particles suspended in viscoelastic fluids under shear can align in string-like structures in flow direction. To unravel this phenomenon, we present 3D direct numerical simulations of the alignment of two and three rigid, non-Brownian particles in a shear flow of a viscoelastic fluid. The equations are solved on moving, boundary-fitted meshes, which are locally refined to accurately describe the polymer stresses around and in between the particles. A small minimal gap size between the particles is introduced. The Giesekus model is used and the effect of the Weissenberg number, shear thinning and solvent viscosity is investigated. Alignment of two and three particles is observed. Morphology plots have been created for various combinations of fluid parameters. Alignment is mainly governed by the value of the elasticity parameter S, defined as half of the ratio between the first normal stress difference and shear stress of the suspending fluid. Alignment appears to occur above a critical value of S, which decreases with increasing shear thinning. This result, together with simulations of a shear-thinning Carreau fluid, leads us to the conclusion that normal stress differences are essential for particle alignment to occur, but it is also strongly promoted by shear thinning.

  3. Direct numerical simulation of human phonation

    NASA Astrophysics Data System (ADS)

    Saurabh, Shakti; Bodony, Daniel

    2016-11-01

    A direct numerical simulation study of the generation and propagation of the human voice in a full-body domain is conducted. A fully compressible fluid flow model, anatomically representative vocal tract geometry, finite deformation model for vocal fold (VF) motion and a fully coupled fluid-structure interaction model are employed. The dynamics of the multi-layered VF tissue with varying stiffness are solved using a quadratic finite element code. The fluid-solid domains are coupled through a boundary-fitted interface and utilize a Poisson equation-based mesh deformation method. A new inflow boundary condition, based upon a quasi-1D formulation with constant sub-glottal volume velocity, linked to the VF movement, has been adopted. Simulations for both child and adult phonation were performed. Acoustic characteristics obtained from these simulation are consistent with expected values. A sensitivity analysis based on VF stiffness variation is undertaken and sound pressure level/fundamental frequency trends are established. An evaluation of the data against the commonly-used quasi-1D equations suggest that the latter are not sufficient to model phonation. Phonation threshold pressures are measured for several VF stiffness variations and comparisons to clinical data are carried out. Supported by the National Science Foundation (CAREER Award Number 1150439).

  4. Strain-rate sensitivity of foam materials: A numerical study using 3D image-based finite element model

    NASA Astrophysics Data System (ADS)

    Sun, Yongle; Li, Q. M.; Withers, P. J.

    2015-09-01

    Realistic simulations are increasingly demanded to clarify the dynamic behaviour of foam materials, because, on one hand, the significant variability (e.g. 20% scatter band) of foam properties and the lack of reliable dynamic test methods for foams bring particular difficulty to accurately evaluate the strain-rate sensitivity in experiments; while on the other hand numerical models based on idealised cell structures (e.g. Kelvin and Voronoi) may not be sufficiently representative to capture the actual structural effect. To overcome these limitations, the strain-rate sensitivity of the compressive and tensile properties of closed-cell aluminium Alporas foam is investigated in this study by means of meso-scale realistic finite element (FE) simulations. The FE modelling method based on X-ray computed tomography (CT) image is introduced first, as well as its applications to foam materials. Then the compression and tension of Alporas foam at a wide variety of applied nominal strain-rates are simulated using FE model constructed from the actual cell geometry obtained from the CT image. The stain-rate sensitivity of compressive strength (collapse stress) and tensile strength (0.2% offset yield point) are evaluated when considering different cell-wall material properties. The numerical results show that the rate dependence of cell-wall material is the main cause of the strain-rate hardening of the compressive and tensile strengths at low and intermediate strain-rates. When the strain-rate is sufficiently high, shock compression is initiated, which significantly enhances the stress at the loading end and has complicated effect on the stress at the supporting end. The plastic tensile wave effect is evident at high strain-rates, but shock tension cannot develop in Alporas foam due to the softening associated with single fracture process zone occurring in tensile response. In all cases the micro inertia of individual cell walls subjected to localised deformation is found to

  5. Dynamical microstructure formation in 3D directional solidification of transparent model alloys: in situ characterization in DECLIC Directional Solidification Insert under diffusion transport in microgravity

    NASA Astrophysics Data System (ADS)

    Bergeon, N.; Mota, F. L.; Chen, L.; Tourret, D.; Debierre, J. M.; Guérin, R.; Karma, A.; Billia, B.; Trivedi, R.

    2015-06-01

    To clarify and characterize the fundamental physical mechanisms active in the dynamical formation of three-dimensional (3D) arrays of cells and dendrites under diffusive growth conditions, in situ monitoring of series of experiments on transparent model alloy succinonitrile - 0.24 wt% camphor was carried out under low gravity in the DECLIC Directional Solidification Insert on-board the International Space Station. These experiments offered the very unique opportunity to in situ observe and characterize the whole development of the microstructure in extended 3D patterns. The experimental methods will be first briefly described, including in particular the observation modes and the image analysis procedures developed to quantitatively characterize the patterns. Microgravity environment provided the conditions to get quantitative benchmark data: homogeneous patterns corresponding to homogeneous values of control parameters along the whole interface were obtained. The sequence of microstructure formation will be presented as well as the evolution of the primary spacing which is one of the most important pattern characteristic. Time evolution of this primary spacing during the microstructure development will be analysed to identify the mechanisms of spacing selection and adjustment; the importance of the macroscopic interfacial curvature will be pointed out.

  6. High performance Python for direct numerical simulations of turbulent flows

    NASA Astrophysics Data System (ADS)

    Mortensen, Mikael; Langtangen, Hans Petter

    2016-06-01

    Direct Numerical Simulations (DNS) of the Navier Stokes equations is an invaluable research tool in fluid dynamics. Still, there are few publicly available research codes and, due to the heavy number crunching implied, available codes are usually written in low-level languages such as C/C++ or Fortran. In this paper we describe a pure scientific Python pseudo-spectral DNS code that nearly matches the performance of C++ for thousands of processors and billions of unknowns. We also describe a version optimized through Cython, that is found to match the speed of C++. The solvers are written from scratch in Python, both the mesh, the MPI domain decomposition, and the temporal integrators. The solvers have been verified and benchmarked on the Shaheen supercomputer at the KAUST supercomputing laboratory, and we are able to show very good scaling up to several thousand cores. A very important part of the implementation is the mesh decomposition (we implement both slab and pencil decompositions) and 3D parallel Fast Fourier Transforms (FFT). The mesh decomposition and FFT routines have been implemented in Python using serial FFT routines (either NumPy, pyFFTW or any other serial FFT module), NumPy array manipulations and with MPI communications handled by MPI for Python (mpi4py). We show how we are able to execute a 3D parallel FFT in Python for a slab mesh decomposition using 4 lines of compact Python code, for which the parallel performance on Shaheen is found to be slightly better than similar routines provided through the FFTW library. For a pencil mesh decomposition 7 lines of code is required to execute a transform.

  7. Mixing behavior of the rhombic micromixers over a wide Reynolds number range using Taguchi method and 3D numerical simulations.

    PubMed

    Chung, C K; Shih, T R; Chen, T C; Wu, B H

    2008-10-01

    A planar micromixer with rhombic microchannels and a converging-diverging element has been systematically investigated by the Taguchi method, CFD-ACE simulations and experiments. To reduce the footprint and extend the operation range of Reynolds number, Taguchi method was used to numerically study the performance of the micromixer in a L(9) orthogonal array. Mixing efficiency is prominently influenced by geometrical parameters and Reynolds number (Re). The four factors in a L(9) orthogonal array are number of rhombi, turning angle, width of the rhombic channel and width of the throat. The degree of sensitivity by Taguchi method can be ranked as: Number of rhombi > Width of the rhombic channel > Width of the throat > Turning angle of the rhombic channel. Increasing the number of rhombi, reducing the width of the rhombic channel and throat and lowering the turning angle resulted in better fluid mixing efficiency. The optimal design of the micromixer in simulations indicates over 90% mixing efficiency at both Re > or = 80 and Re < or = 0.1. Experimental results in the optimal simulations are consistent with the simulated one. This planar rhombic micromixer has simplified the complex fabrication process of the multi-layer or three-dimensional micromixers and improved the performance of a previous rhombic micromixer at a reduced footprint and lower Re.

  8. Numerical simulation of tip leakage vortex effect on hydrogen-combustion flow around 3D turbine blade

    NASA Astrophysics Data System (ADS)

    Miyama, Naoto; Inaba, Kazuaki; Yamamoto, Makoto

    2008-06-01

    In these years, a lot of environmental problems such as air pollution and exhaustion of fossil fuels have been discussed intensively. In our laboratory, a hydrogen-fueled propulsion system has been researched as an alternative to conventional systems. A hydrogen-fueled propulsion system is expected to have higher power, lighter weight and lower emissions. However, for the practical use, there exist many problems that must be overcome. Considering these backgrounds, jet engines with hydrogen-fueled combustion within a turbine blade passage have been studied. Although some studies have been made on injecting and burning hydrogen fuel from a stator surface, little is known about the interaction between a tip leakage vortex near the suction side of a rotor tip and hydrogen-fueled combustion. The purpose of this study is to clarify the influence of the tip leakage vortex on the characteristics of the 3-dimensional flow field with hydrogen-fueled combustion within a turbine blade passage. Reynolds-averaged compressible Navier-Stokes equations are solved with incorporating a k-ɛ turbulence and a reduced chemical mechanism models. Using the computational results, the 3-dimensional turbulent flow field with chemical reactions is numerically visualized, and the three-dimensional turbulent flow fields with hydrogen combustion and the structure of the tip leakage vortex are investigated.

  9. The 3D Kasteleyn transition in dipolar spin ice: a numerical study with the conserved monopoles algorithm.

    PubMed

    Baez, M L; Borzi, R A

    2017-02-08

    We study the three-dimensional Kasteleyn transition in both nearest neighbours and dipolar spin ice models using an algorithm that conserves the number of excitations. We first limit the interactions range to nearest neighbours to test the method in the presence of a field applied along [Formula: see text], and then focus on the dipolar spin ice model. The effect of dipolar interactions, which is known to be greatly self screened at zero field, is particularly strong near full polarization. It shifts the Kasteleyn transition to lower temperatures, which decreases  ≈0.4 K for the parameters corresponding to the best known spin ice materials, [Formula: see text] and [Formula: see text]. This shift implies effective dipolar fields as big as 0.05 T opposing the applied field, and thus favouring the creation of 'strings' of reversed spins. We compare the reduction in the transition temperature with results in previous experiments, and study the phenomenon quantitatively using a simple molecular field approach. Finally, we relate the presence of the effective residual field to the appearance of string-ordered phases at low fields and temperatures, and we check numerically that for fields applied along [Formula: see text] there are only three different stable phases at zero temperature.

  10. Numerical Investigation of 3-D Transient Combusting Flow in a 1.2MWth Pilot Power Plant

    NASA Astrophysics Data System (ADS)

    Nikolopoulos, A.; Rampldls, I.; Nlkelopoules, N.; Grammells, P.; Kakaras, E.

    As industrial Circulating Fluidized bed Combustors (CFBCs) tend to be scaled up, numerous design and operating problems emerge. At the same time uncertainties which concern hydrodynamics, combustion and pollutants formation mechanisms, come in to sight. Along with experience, CFD analysis can play crucial role providing further insight on the complex multiphase combusting flow occurring in CFBCs. This work aims to present a methodology for CFBCs comprehensive modeling, taking into consideration the coupling of hydrodynamics — heat transfer — chemical phenomena that take place in the bed. A combination of acceptable accuracy with high computational efficiency was also an objective. For this purpose, a simple combustion mechanism was integrated in an isothermal model and applied on a 1.2 MWth pilot plant. In this comprehensive model gas, inert-material and fuel are taken into consideration, as three discrete, pure eulerian phases. Solids inventory in the riser as well as temperature of the bed were predicted with satisfactory accuracy. Moreover, major chemical components as O2 and CO2 concentrations were predicted along the bed with acceptable accuracy. Concluding, the developed CFD model is capable of efficiently modeling a CFBC. However in order to further increase total accuracy, the need for improved closure equations for the set ofPartial Differential Equations solved was made obvious. Finally, the computational cost for such modeling was found extremely high but not prohibitive for large scale CFBC simulations.

  11. The 3D Kasteleyn transition in dipolar spin ice: a numerical study with the conserved monopoles algorithm

    NASA Astrophysics Data System (ADS)

    Baez, M. L.; Borzi, R. A.

    2017-02-01

    We study the three-dimensional Kasteleyn transition in both nearest neighbours and dipolar spin ice models using an algorithm that conserves the number of excitations. We first limit the interactions range to nearest neighbours to test the method in the presence of a field applied along ≤ft[1 0 0\\right] , and then focus on the dipolar spin ice model. The effect of dipolar interactions, which is known to be greatly self screened at zero field, is particularly strong near full polarization. It shifts the Kasteleyn transition to lower temperatures, which decreases  ≈0.4 K for the parameters corresponding to the best known spin ice materials, \\text{D}{{\\text{y}}2}\\text{T}{{\\text{i}}2}{{\\text{O}}7} and \\text{H}{{\\text{o}}2}\\text{T}{{\\text{i}}2}{{\\text{O}}7} . This shift implies effective dipolar fields as big as 0.05 T opposing the applied field, and thus favouring the creation of ‘strings’ of reversed spins. We compare the reduction in the transition temperature with results in previous experiments, and study the phenomenon quantitatively using a simple molecular field approach. Finally, we relate the presence of the effective residual field to the appearance of string-ordered phases at low fields and temperatures, and we check numerically that for fields applied along ≤ft[1 0 0\\right] there are only three different stable phases at zero temperature.

  12. Numerical study of the 3D-shape of a drop immersed in a fluid under an elongational flow with vorticity

    NASA Astrophysics Data System (ADS)

    Sanjuan, A. S.; Reyes, M. A. H.; Minzoni, A. A.; Geffroy, E.

    2017-01-01

    This work focuses on a three-dimensional analysis of the deformation of a drop — immersed in a Newtonian fluid— generated by a 2D elongational flow with vorticity. The study of steady-state deformations of the cross-section of the drop shows a prevalent non-circular shape. The axisymmetric idealization of the ellipsoid is not observed nor the linear dependency between capillary number and deformation of the drop, as Taylor and Cox theory predicted. Our numerical results are consistent with experiments and other numerical simulations. However, in the latter cases, measurements of the cross section of the drop are few while a limited class of flows is applied. In this work, deformations induced by general two-dimensional flows upon the 3D drop shape are presented with special emphasis about the length scale along the third axis —perpendicular to the plane of the applied flow field.

  13. Identifying the origin of differences between 3D numerical simulations of ground motion in sedimentary basins: lessons from stringent canonical test models in the E2VP framework

    NASA Astrophysics Data System (ADS)

    Chaljub, Emmanuel; Maufroy, Emeline; Moczo, Peter; Kristek, Jozef; Priolo, Enrico; Klin, Peter; De Martin, Florent; Zhang, Zenghuo; Hollender, Fabrice; Bard, Pierre-Yves

    2013-04-01

    Numerical simulation is playing a role of increasing importance in the field of seismic hazard by providing quantitative estimates of earthquake ground motion, its variability, and its sensitivity to geometrical and mechanical properties of the medium. Continuous efforts to develop accurate and computationally efficient numerical methods, combined with increasing computational power have made it technically feasible to calculate seismograms in 3D realistic configurations and for frequencies of interest in seismic design applications. Now, in order to foster the use of numerical simulations in practical prediction of earthquake ground motion, it is important to evaluate the accuracy of current numerical methods when applied to realistic 3D sites. This process of verification is a necessary prerequisite to confrontation of numerical predictions and observations. Through the ongoing Euroseistest Verification and Validation Project (E2VP), which focuses on the Mygdonian basin (northern Greece), we investigated the capability of numerical methods to predict earthquake ground motion for frequencies up to 4 Hz. Numerical predictions obtained by several teams using a wide variety of methods were compared using quantitative goodness-of-fit criteria. In order to better understand the cause of misfits between different simulations, initially performed for the realistic geometry of the Mygdonian basin, we defined five stringent canonical configurations. The canonical models allow for identifying sources of misfits and quantify their importance. Detailed quantitative comparison of simulations in relation to dominant features of the models shows that even relatively simple heterogeneous models must be treated with maximum care in order to achieve sufficient level of accuracy. One important conclusion is that the numerical representation of models with strong variations (e.g. discontinuities) may considerably vary from one method to the other, and may become a dominant source of

  14. Slab-Dip Variability and Trench-Parallel Flow beneath Non-Uniform Overriding Plates: Insights form 3D Numerical Models

    NASA Astrophysics Data System (ADS)

    Rodríguez-González, J.; Billen, M. I.; Negredo, A. M.

    2012-12-01

    Forces driving plate tectonics are reasonably well known but some factors controlling the dynamics and the geometry of subduction processes are still poorly understood. The effect of the thermal state of the subducting and overriding plates on the slab dip have been systematically studied in previous works by means of 2D and 3D numerical modeling. These models showed that kinematically-driven slabs subducting under a cold overriding plate are affected by an increased hydrodynamic suction, due to the lower temperature of the mantle wedge, which leads to a lower subduction angle, and eventually to the formation of flat slab segments. In these models the subduction is achieved by imposing a constant velocity at the top of the overriding plate, which may lead to unrealistic results. Here we present the results of 3D non-Newtonian thermo-mechanical numerical models, considering a dynamically-driven self-sustained subduction, to test the influence of a non-uniform overriding plate. Variations of the thermal state of the overriding plate along the trench cause variation in the hydrodynamic suction, which lead to variations of the slab dip along strike (Fig. 1) and a significant trench-parallel flow. When the material can flow around the edges of the slab, through the addition of lateral plates, the trench parallel flow is enhanced (Fig. 2), whereas the variations on the slab dip are diminished.; Effect of a non-uniform overriding plate on slab-dip. 3D view of the 1000 C isosurface. ; Effect of a non-uniform overriding plate on trench-parallel flow. Map view of the slab at different depths and times, showing the viscosity (colormap) and the velocity (arrows).

  15. Leakage detection of Marcellus Shale natural gas at an Upper Devonian gas monitoring well: a 3-d numerical modeling approach.

    PubMed

    Zhang, Liwei; Anderson, Nicole; Dilmore, Robert; Soeder, Daniel J; Bromhal, Grant

    2014-09-16

    Potential natural gas leakage into shallow, overlying formations and aquifers from Marcellus Shale gas drilling operations is a public concern. However, before natural gas could reach underground sources of drinking water (USDW), it must pass through several geologic formations. Tracer and pressure monitoring in formations overlying the Marcellus could help detect natural gas leakage at hydraulic fracturing sites before it reaches USDW. In this study, a numerical simulation code (TOUGH 2) was used to investigate the potential for detecting leaking natural gas in such an overlying geologic formation. The modeled zone was based on a gas field in Greene County, Pennsylvania, undergoing production activities. The model assumed, hypothetically, that methane (CH4), the primary component of natural gas, with some tracer, was leaking around an existing well between the Marcellus Shale and the shallower and lower-pressure Bradford Formation. The leaky well was located 170 m away from a monitoring well, in the Bradford Formation. A simulation study was performed to determine how quickly the tracer monitoring could detect a leak of a known size. Using some typical parameters for the Bradford Formation, model results showed that a detectable tracer volume fraction of 2.0 × 10(-15) would be noted at the monitoring well in 9.8 years. The most rapid detection of tracer for the leak rates simulated was 81 days, but this scenario required that the leakage release point was at the same depth as the perforation zone of the monitoring well and the zones above and below the perforation zone had low permeability, which created a preferred tracer migration pathway along the perforation zone. Sensitivity analysis indicated that the time needed to detect CH4 leakage at the monitoring well was very sensitive to changes in the thickness of the high-permeability zone, CH4 leaking rate, and production rate of the monitoring well.

  16. 3D Biomaterial Microarrays for Regenerative Medicine: Current State-of-the-Art, Emerging Directions and Future Trends.

    PubMed

    Gaharwar, Akhilesh K; Arpanaei, Ayyoob; Andresen, Thomas L; Dolatshahi-Pirouz, Alireza

    2016-01-27

    Three dimensional (3D) biomaterial microarrays hold enormous promise for regenerative medicine because of their ability to accelerate the design and fabrication of biomimetic materials. Such tissue-like biomaterials can provide an appropriate microenvironment for stimulating and controlling stem cell differentiation into tissue-specific lineages. The use of 3D biomaterial microarrays can, if optimized correctly, result in a more than 1000-fold reduction in biomaterials and cells consumption when engineering optimal materials combinations, which makes these miniaturized systems very attractive for tissue engineering and drug screening applications.

  17. Direct numerical simulation of free falling sphere in creeping flow

    NASA Astrophysics Data System (ADS)

    Reddy, Rupesh K.; Jin, Shi; Nandakumar, K.; Minev, Peter D.; Joshi, Jyeshtharaj B.

    2010-03-01

    In the present study, direct numerical simulations (DNS) are performed on single and a swarm of particles settling under the action of gravity. The simulations have been carried out in the creeping flow range of Reynolds number from 0.01 to 1 for understanding the hindrance effect, of the other particles, on the settling velocity and drag coefficient. The DNS code is a non-Lagrange multiplier-based fictitious-domain method, which has been developed and validated by Jin et al. (2008; A parallel algorithm for the direct numerical simulation of 3D inertial particle sedimentation. In: Conference proceedings of the 16th annual conference of the CFD Society of Canada). It has been observed that the time averaged settling velocity of the particle in the presence of other particles, decreases with an increase in the number of particles surrounding it (from 9 particles to 245 particles). The effect of the particle volume fraction on the drag coefficient has also been studied and it has been observed that the computed values of drag coefficients are in good agreement with the correlations proposed by Richardson and Zaki (1954; Sedimentation and fluidization: part I. Transactions of the Institution of Chemical Engineers, 32, 35-53) and Pandit and Joshi (1998; Pressure drop in packed, expanded and fluidised beds, packed columns and static mixers - a unified approach. Reviews in Chemical Engineering, 14, 321-371). The suspension viscosity-based model of Frankel and Acrivos (1967; On the viscosity of a concentrated suspension of solid spheres. Chemical Engineering Science, 22, 847-853) shows good agreement with the DNS results.

  18. Expanding the degree of freedom of observation on depth-direction by the triple-separated slanted parallax barrier in autostereoscopic 3D display

    NASA Astrophysics Data System (ADS)

    Lee, Kwang-Hoon; Choe, Yeong-Seon; Lee, Dong-Kil; Kim, Yang-Gyu; Park, Youngsik; Park, Min-Chul

    2013-05-01

    Autostereoscopic multi-views 3D display system has a narrow freedom of degrees to the observational directions such as horizontal and perpendicular direction to the display plane than the glasses on type. In this paper, we proposed an innovative method that expanding a width of formed viewing zone on the depth direction keeping with the number of views on horizontal direction by using the triple segmented-slanted parallax barrier (TS-SPB) in the glasses-off type of 3D display. The validity of the proposal is verified by optical simulation based on the environment similar to an actual case. In benefits, the maximum number of views to display on horizontal direction is to be 2n and the width of viewing zone on depth direction is to be increased up to 3.36 times compared to the existing one-layered parallax barrier system.

  19. Evaluation of local electric fields generated by transcranial direct current stimulation with an extracephalic reference electrode based on realistic 3D body modeling

    NASA Astrophysics Data System (ADS)

    Im, Chang-Hwan; Park, Ji-Hye; Shim, Miseon; Chang, Won Hyuk; Kim, Yun-Hee

    2012-04-01

    In this study, local electric field distributions generated by transcranial direct current stimulation (tDCS) with an extracephalic reference electrode were evaluated to address extracephalic tDCS safety issues. To this aim, we generated a numerical model of an adult male human upper body and applied the 3D finite element method to electric current conduction analysis. In our simulations, the active electrode was placed over the left primary motor cortex (M1) and the reference electrode was placed at six different locations: over the right temporal lobe, on the right supraorbital region, on the right deltoid, on the left deltoid, under the chin, and on the right buccinator muscle. The maximum current density and electric field intensity values in the brainstem generated by the extracephalic reference electrodes were comparable to, or even less than, those generated by the cephalic reference electrodes. These results suggest that extracephalic reference electrodes do not lead to unwanted modulation of the brainstem cardio-respiratory and autonomic centers, as indicated by recent experimental studies. The volume energy density was concentrated at the neck area by the use of deltoid reference electrodes, but was still smaller than that around the active electrode locations. In addition, the distributions of elicited cortical electric fields demonstrated that the use of extracephalic reference electrodes might allow for the robust prediction of cortical modulations with little dependence on the reference electrode locations.

  20. Evaluation of local electric fields generated by transcranial direct current stimulation with an extracephalic reference electrode based on realistic 3D body modeling.

    PubMed

    Im, Chang-Hwan; Park, Ji-Hye; Shim, Miseon; Chang, Won Hyuk; Kim, Yun-Hee

    2012-04-21

    In this study, local electric field distributions generated by transcranial direct current stimulation (tDCS) with an extracephalic reference electrode were evaluated to address extracephalic tDCS safety issues. To this aim, we generated a numerical model of an adult male human upper body and applied the 3D finite element method to electric current conduction analysis. In our simulations, the active electrode was placed over the left primary motor cortex (M1) and the reference electrode was placed at six different locations: over the right temporal lobe, on the right supraorbital region, on the right deltoid, on the left deltoid, under the chin, and on the right buccinator muscle. The maximum current density and electric field intensity values in the brainstem generated by the extracephalic reference electrodes were comparable to, or even less than, those generated by the cephalic reference electrodes. These results suggest that extracephalic reference electrodes do not lead to unwanted modulation of the brainstem cardio-respiratory and autonomic centers, as indicated by recent experimental studies. The volume energy density was concentrated at the neck area by the use of deltoid reference electrodes, but was still smaller than that around the active electrode locations. In addition, the distributions of elicited cortical electric fields demonstrated that the use of extracephalic reference electrodes might allow for the robust prediction of cortical modulations with little dependence on the reference electrode locations.

  1. Corrosion-Mediated Self-Assembly (CMSA): Direct Writing Towards Sculpturing of 3D Tunable Functional Nanostructures.

    PubMed

    Wang, Jing; Ho, Ghim Wei

    2015-12-21

    Inexpensive and readily available metal foils have been extracted and sculptured into nanocomposites without the expense of applied energy. The unwanted corrosion phenomenon has been contrarily utilized to realize desirable 3D nanostructures through a corrosion-mediated self-assembly (CMSA) method, which is unattainable by conventional 2D patterning routes. By virtue of electrochemical dissolution/re-deposition initiated by brass corrosion, ionic derivatives (Zn(2+) and Cu(2+) ) are continuously supplied and seized by etchant ions (PO4 (3-) ) to self-assemble into well-defined nanocomposites. Beyond 3D geometry patterning, CMSA enables arbitrarily tailoring of structures and chemical compositions with in situ multiphase amalgamation of hybrid materials, which improves homogeneity and thus mitigates phase separation issues. Importantly, the CMSA technique is demonstrated on transition metals for functional photocatalytic applications.

  2. 3D numerical analyses for the quantitative risk assessment of subsidence and water flood due to the partial collapse of an abandoned gypsum mine.

    NASA Astrophysics Data System (ADS)

    Castellanza, R.; Orlandi, G. M.; di Prisco, C.; Frigerio, G.; Flessati, L.; Fernandez Merodo, J. A.; Agliardi, F.; Grisi, S.; Crosta, G. B.

    2015-09-01

    After the abandonment occurred in the '70s, the mining system (rooms and pillars) located in S. Lazzaro di Savena (BO, Italy), grown on three levels with the method rooms and pillars, has been progressively more and more affected by degradation processes due to water infiltration. The mine is located underneath a residential area causing significant concern to the local municipality. On the basis of in situ surveys, laboratory and in situ geomechanical tests, some critical scenarios were adopted in the analyses to simulate the progressive collapse of pillars and of roofs in the most critical sectors of the mine. A first set of numerical analyses using 3D geotechnical FEM codes were performed to predict the extension of the subsidence area and its interaction with buildings. Secondly 3D CFD analyses were used to evaluated the amount of water that could be eventually ejected outside the mine and eventually flooding the downstream village. The predicted extension of the subsidence area together with the predicted amount of the ejected water have been used to design possible remedial measurements.

  3. Direct fabrication of 3D graphene on nanoporous anodic alumina by plasma-enhanced chemical vapor deposition

    NASA Astrophysics Data System (ADS)

    Zhan, Hualin; Garrett, David J.; Apollo, Nicholas V.; Ganesan, Kumaravelu; Lau, Desmond; Prawer, Steven; Cervenka, Jiri

    2016-01-01

    High surface area electrode materials are of interest for a wide range of potential applications such as super-capacitors and electrochemical cells. This paper describes a fabrication method of three-dimensional (3D) graphene conformally coated on nanoporous insulating substrate with uniform nanopore size. 3D graphene films were formed by controlled graphitization of diamond-like amorphous carbon precursor films, deposited by plasma-enhanced chemical vapour deposition (PECVD). Plasma-assisted graphitization was found to produce better quality graphene than a simple thermal graphitization process. The resulting 3D graphene/amorphous carbon/alumina structure has a very high surface area, good electrical conductivity and exhibits excellent chemically stability, providing a good material platform for electrochemical applications. Consequently very large electrochemical capacitance values, as high as 2.1 mF for a sample of 10 mm3, were achieved. The electrochemical capacitance of the material exhibits a dependence on bias voltage, a phenomenon observed by other groups when studying graphene quantum capacitance. The plasma-assisted graphitization, which dominates the graphitization process, is analyzed and discussed in detail.

  4. Direct fabrication of 3D graphene on nanoporous anodic alumina by plasma-enhanced chemical vapor deposition

    PubMed Central

    Zhan, Hualin; Garrett, David J.; Apollo, Nicholas V.; Ganesan, Kumaravelu; Lau, Desmond; Prawer, Steven; Cervenka, Jiri

    2016-01-01

    High surface area electrode materials are of interest for a wide range of potential applications such as super-capacitors and electrochemical cells. This paper describes a fabrication method of three-dimensional (3D) graphene conformally coated on nanoporous insulating substrate with uniform nanopore size. 3D graphene films were formed by controlled graphitization of diamond-like amorphous carbon precursor films, deposited by plasma-enhanced chemical vapour deposition (PECVD). Plasma-assisted graphitization was found to produce better quality graphene than a simple thermal graphitization process. The resulting 3D graphene/amorphous carbon/alumina structure has a very high surface area, good electrical conductivity and exhibits excellent chemically stability, providing a good material platform for electrochemical applications. Consequently very large electrochemical capacitance values, as high as 2.1 mF for a sample of 10 mm3, were achieved. The electrochemical capacitance of the material exhibits a dependence on bias voltage, a phenomenon observed by other groups when studying graphene quantum capacitance. The plasma-assisted graphitization, which dominates the graphitization process, is analyzed and discussed in detail. PMID:26805546

  5. Simultaneous estimation of size, radial and angular locations of a malignant tumor in a 3-D human breast - A numerical study.

    PubMed

    Das, Koushik; Mishra, Subhash C

    2015-08-01

    This article reports a numerical study pertaining to simultaneous estimation of size, radial location and angular location of a malignant tumor in a 3-D human breast. The breast skin surface temperature profile is specific to a tumor of specific size and location. The temperature profiles are always the Gaussian one, though their peak magnitudes and areas differ according to the size and location of the tumor. The temperature profiles are obtained by solving the Pennes bioheat equation using the finite element method based solver COMSOL 4.3a. With temperature profiles known, simultaneous estimation of size, radial location and angular location of the tumor is done using the curve fitting method. Effect of measurement errors is also included in the study. Estimations are accurate, and since in the inverse analysis, the curve fitting method does not require solution of the governing bioheat equation, the estimation is very fast.

  6. 3D numerical test objects for the evaluation of a software used for an automatic analysis of a linear accelerator mechanical stability

    NASA Astrophysics Data System (ADS)

    Torfeh, Tarraf; Beaumont, Stéphane; Guédon, Jeanpierre; Benhdech, Yassine

    2010-04-01

    Mechanical stability of a medical LINear ACcelerator (LINAC), particularly the quality of the gantry, collimator and table rotations and the accuracy of the isocenter position, are crucial for the radiation therapy process, especially in stereotactic radio surgery and in Image Guided Radiation Therapy (IGRT) where this mechanical stability is perturbed due to the additional weight the kV x-ray tube and detector. In this paper, we present a new method to evaluate a software which is used to perform an automatic measurement of the "size" (flex map) and the location of the kV and the MV isocenters of the linear accelerator. The method consists of developing a complete numerical 3D simulation of a LINAC and physical phantoms in order to produce Electronic Portal Imaging Device (EPID) images including calibrated distortions of the mechanical movement of the gantry and isocenter misalignments.

  7. Melt-rock reaction in the asthenospheric mantle: Perspectives from high-order accurate numerical simulations in 2D and 3D

    NASA Astrophysics Data System (ADS)

    Tirupathi, S.; Schiemenz, A. R.; Liang, Y.; Parmentier, E.; Hesthaven, J.

    2013-12-01

    The style and mode of melt migration in the mantle are important to the interpretation of basalts erupted on the surface. Both grain-scale diffuse porous flow and channelized melt migration have been proposed. To better understand the mechanisms and consequences of melt migration in a heterogeneous mantle, we have undertaken a numerical study of reactive dissolution in an upwelling and viscously deformable mantle where solubility of pyroxene increases upwards. Our setup is similar to that described in [1], except we use a larger domain size in 2D and 3D and a new numerical method. To enable efficient simulations in 3D through parallel computing, we developed a high-order accurate numerical method for the magma dynamics problem using discontinuous Galerkin methods and constructed the problem using the numerical library deal.II [2]. Linear stability analyses of the reactive dissolution problem reveal three dynamically distinct regimes [3] and the simulations reported in this study were run in the stable regime and the unstable wave regime where small perturbations in porosity grows periodically. The wave regime is more relevant to melt migration beneath the mid-ocean ridges but computationally more challenging. Extending the 2D simulations in the stable regime in [1] to 3D using various combinations of sustained perturbations in porosity at the base of the upwelling column (which may result from a viened mantle), we show the geometry and distribution of dunite channel and high-porosity melt channels are highly correlated with inflow perturbation through superposition. Strong nonlinear interactions among compaction, dissolution, and upwelling give rise to porosity waves and high-porosity melt channels in the wave regime. These compaction-dissolution waves have well organized but time-dependent structures in the lower part of the simulation domain. High-porosity melt channels nucleate along nodal lines of the porosity waves, growing downwards. The wavelength scales

  8. Direct Numerical Simulation of Liquid Transport Through Fibrous Porous Media

    NASA Astrophysics Data System (ADS)

    Palakurthi, Nikhil Kumar

    Fluid flow through fibrous media occurs in many industrial processes, including, but not limited, to fuel cell technology, drug delivery patches, sanitary products, textile reinforcement, filtration, heat exchangers, and performance fabrics. Understanding the physical processes involved in fluid flow through fibrous media is essential for their characterization as well as for the optimization and development of new products. Macroscopic porous-media equations require constitutive relations, which account for the physical processes occurring at the micro-scale, to predict liquid transport at the macro-scale. In this study, micro-scale simulations were conducted using conventional computational fluid dynamics (CFD) technique (finite-volume method) to determine the macroscopic constitutive relations. The first part of this thesis deals with the single-phase flow in fibrous media, following which multi-phase flow through fibrous media was studied. Darcy permeability is an important parameter that characterizes creeping flow through a fibrous porous medium. It has a complex dependence on the medium's properties such as fibers' in-plane and through-plane orientation, diameter, aspect ratio, curvature, and porosity. A suite of 3D virtual fibrous structures with a wide range of geometric properties were constructed, and the permeability values of the structures were calculated by solving the 3D incompressible Navier-Stokes equations. The through-plane permeability was found to be a function of only the fiber diameter, the fibers' through-plane orientation, and the porosity of the medium. The numerical results were used to extend a permeability-porosity relation, developed in literature for 3D isotropic fibrous media, to a wide range of fibers' through-plane orientations. In applications where rate of capillary penetration is important, characterization of porous media usually involves determination of either the effective pore radius from capillary penetration experiments

  9. Cellular Microcultures: Programming Mechanical and Physicochemical Properties of 3D Hydrogel Cellular Microcultures via Direct Ink Writing (Adv. Healthcare Mater. 9/2016).

    PubMed

    McCracken, Joselle M; Badea, Adina; Kandel, Mikhail E; Gladman, A Sydney; Wetzel, David J; Popescu, Gabriel; Lewis, Jennifer A; Nuzzo, Ralph G

    2016-05-01

    R. Nuzzo and co-workers show on page 1025 how compositional differences in hydrogels are used to tune their cellular compliance by controlling their polymer mesh properties and subsequent uptake of the protein poly-l-lysine (green spheres in circled inset). The cover image shows pyramid micro-scaffolds prepared using direct ink writing (DIW) that differentially direct fibroblast and preosteoblast growth in 3D, depending on cell motility and surface treatment.

  10. Anthropometric precision and accuracy of digital three-dimensional photogrammetry: comparing the Genex and 3dMD imaging systems with one another and with direct anthropometry.

    PubMed

    Weinberg, Seth M; Naidoo, Sybill; Govier, Daniel P; Martin, Rick A; Kane, Alex A; Marazita, Mary L

    2006-05-01

    A variety of commercially available three-dimensional (3D) surface imaging systems are currently in use by craniofacial specialists. Little is known, however, about how measurement data generated from alternative 3D systems compare, specifically in terms of accuracy and precision. The purpose of this study was to compare anthropometric measurements obtained by way of two different digital 3D photogrammetry systems (Genex and 3dMD) as well as direct anthropometry and to evaluate intraobserver precision across these three methods. On a sample of 18 mannequin heads, 12 linear distances were measured twice by each method. A two-factor repeated measures analysis of variance was used to test simultaneously for mean differences in precision across methods. Additional descriptive statistics (e.g., technical error of measurement [TEM]) were used to quantify measurement error magnitude. Statistically significant (P < 0.05) mean differences were observed across methods for nine anthropometric variables; however, the magnitude of these differences was consistently at the submillimeter level. No significant differences were noted for precision. Moreover, the magnitude of imprecision was determined to be very small, with TEM scores well under 1 mm, and intraclass correlation coefficients ranging from 0.98 to 1. Results indicate that overall mean differences across these three methods were small enough to be of little practical importance. In terms of intraobserver precision, all methods fared equally well. This study is the first attempt to simultaneously compare 3D surface imaging systems directly with one another and with traditional anthropometry. Results suggest that craniofacial surface data obtained by way of alternative 3D photogrammetric systems can be combined or compared statistically.

  11. Direct 3D visualization of the phase-separated morphology in chlorinated polyethylene/nylon terpolyamide based thermoplastic elastomers.

    PubMed

    Crisenza, Tommaso; Butt, Hans-Jürgen; Koynov, Kaloian; Simonutti, Roberto

    2012-01-01

    Blends of chlorinated polyethylene and nylon-6/-6,6/-12 terpolyamide were prepared. The ratio of the two components was systematically varied within the blends. The mechanical behavior of the samples was analyzed with tensile tests and dynamical mechanical analysis showing that, for several ratios, materials with improved mechanical properties typical of thermoplastic elastomers were obtained. In such a mechanical regime, a co-continuous phase-separated morphology was clearly evidenced at the microscopic scale by 3D laser scanning confocal fluorescent microscopy (LSCFM). At blend compositions where plastic tensile behavior is observed, LSCFM reveals dispersed spheres of one component in the other.

  12. Anodization control for barrier-oxide thinning and 3D interconnected pores and direct electrodeposition of nanowire networks on native aluminium substrates.

    PubMed

    Gillette, Eleanor; Wittenberg, Stefanie; Graham, Lauren; Lee, Kwijong; Rubloff, Gary; Banerjee, Parag; Lee, Sang Bok

    2015-02-07

    Here we report a strategy for combining techniques for pore branching and barrier layer thinning to produce 3D porous anodized aluminum oxide films with direct ohmic contact to the native aluminum. This method provides an example of a rationally designed template which need not be removed from the aluminum, but which is also not constrained to traditional 2D pore geometry. We first demonstrate the barrier layer removal and pore branching techniques independently, and then combine them to produce free standing arrays of interconnected Ni nanostructures. Nickel nanostructures are deposited directly onto the aluminum to demonstrate the success of the structural modification, and showcase the potential for these films to be used as templates. This approach is the first to demonstrate the design and execution of multiple pore modification techniques in the same membrane, and demonstrates the first directly deposited 3D structures on aluminum substrates.

  13. Potassium uranyl borate 3D framework compound resulted from temperature directed hydroborate condensation: structure, spectroscopy, and dissolution studies.

    PubMed

    Xu, Xiaomei; Liu, Zhiyong; Yang, Shitong; Chen, Lanhua; Diwu, Juan; Alekseev, Evgeny V; Chai, Zhifang; Albrecht-Schmitt, Thomas E; Wang, Shuao

    2016-10-04

    The equatorial coordination nature of the uranyl unit has resulted in only three uranyl borate 3D framework compounds reported so far formed from boric acid flux reactions conducted at 190 °C while all others are 2D layers. Here in this work, by increasing the reaction temperature to 250 °C, a new potassium uranyl borate K[(UO2)B6O10(OH)] (KUBO-4) framework compound is synthesized that shares the same layer topology with the previously reported 2D layered KUBO-1. The 3D structure of KUBO-4 is achieved by interlayer hydroborate condensation. The KUBO-4 was further characterized with single crystal XRD, SHG and fluorescence spectra, and TG/DSC measurements. A deep understanding regarding the dissolution behaviours of uranyl borate is achieved via solubility studies of the KUBO-1 and KUBO-4 performed using a combination of ICP-MS, powder XRD, and fluorescence spectroscopy techniques. The results confirm the lack of stability of borates in aqueous solutions with the presence of coordinating ligands in the environment regardless of the structure types.

  14. 3D Numerical Simulation versus Experimental Assessment of Pressure Pulsations Using a Passive Method for Swirling Flow Control in Conical Diffusers of Hydraulic Turbines

    NASA Astrophysics Data System (ADS)

    TANASA, C.; MUNTEAN, S.; CIOCAN, T.; SUSAN-RESIGA, R. F.

    2016-11-01

    The hydraulic turbines operated at partial discharge (especially hydraulic turbines with fixed blades, i.e. Francis turbine), developing a swirling flow in the conical diffuser of draft tube. As a result, the helical vortex breakdown, also known in the literature as “precessing vortex rope” is developed. A passive method to mitigate the pressure pulsations associated to the vortex rope in the draft tube cone of hydraulic turbines is presented in this paper. The method involves the development of a progressive and controlled throttling (shutter), of the flow cross section at the bottom of the conical diffuser. The adjustable cross section is made on the basis of the shutter-opening of circular diaphragms, while maintaining in all positions the circular cross-sectional shape, centred on the axis of the turbine. The stagnant region and the pressure pulsations associated to the vortex rope are mitigated when it is controlled with the turbine operating regime. Consequently, the severe flow deceleration and corresponding central stagnant are diminished with an efficient mitigation of the precessing helical vortex. Four cases (one without diaphragm and three with diaphragm), are numerically and experimentally investigated, respectively. The present paper focuses on a 3D turbulent swirling flow simulation in order to evaluate the control method. Numerical results are compared against measured pressure recovery coefficient and Fourier spectra. The results prove the vortex rope mitigation and its associated pressure pulsations when employing the diaphragm.

  15. Direct numerical simulation of turbulent mixing.

    PubMed

    Statsenko, V P; Yanilkin, Yu V; Zhmaylo, V A

    2013-11-28

    The results of three-dimensional numerical simulations of turbulent flows obtained by various authors are reviewed. The paper considers the turbulent mixing (TM) process caused by the development of the main types of instabilities: those due to gravitation (with either a fixed or an alternating-sign acceleration), shift and shock waves. The problem of a buoyant jet is described as an example of the mixed-type problem. Comparison is made with experimental data on the TM zone width, profiles of density, velocity and turbulent energy and degree of homogeneity.

  16. Direct Numerical Simulation of Automobile Cavity Tones

    NASA Technical Reports Server (NTRS)

    Kurbatskii, Konstantin; Tam, Christopher K. W.

    2000-01-01

    The Navier Stokes equation is solved computationally by the Dispersion-Relation-Preserving (DRP) scheme for the flow and acoustic fields associated with a laminar boundary layer flow over an automobile door cavity. In this work, the flow Reynolds number is restricted to R(sub delta*) < 3400; the range of Reynolds number for which laminar flow may be maintained. This investigation focuses on two aspects of the problem, namely, the effect of boundary layer thickness on the cavity tone frequency and intensity and the effect of the size of the computation domain on the accuracy of the numerical simulation. It is found that the tone frequency decreases with an increase in boundary layer thickness. When the boundary layer is thicker than a certain critical value, depending on the flow speed, no tone is emitted by the cavity. Computationally, solutions of aeroacoustics problems are known to be sensitive to the size of the computation domain. Numerical experiments indicate that the use of a small domain could result in normal mode type acoustic oscillations in the entire computation domain leading to an increase in tone frequency and intensity. When the computation domain is expanded so that the boundaries are at least one wavelength away from the noise source, the computed tone frequency and intensity are found to be computation domain size independent.

  17. Terascale Direct Numerical Simulations of Turbulent Combustion: Capabilities and Limits (PReSS Talk)

    SciTech Connect

    Yoo, Chun Sang

    2009-03-26

    The rapid growth in computational capabilities has provided great opportunities for direct numerical simulations (DNS) of turbulent combustion, a type of simulations without any turbulence model. With the help of terascale high performance supercomputing (HPC) resources, we are now able to provide fundamental insight into turbulence-chemistry interaction in simple laboratory-scale turbulent flames with detailed chemistry using three-dimensional (3D) DNS. However, the actual domain size of 3D-DNS is still limited within {approx} O(10 cm{sup 3}) due to its tremendously high grid resolution required to resolve the smallest turbulent length scale as well as flame structures. Moreover, 3D-DNS will require more computing powers to investigate next-generation engines, of which operating conditions will be characterized by higher pressures, lower temperatures, and higher levels of dilution. In this talk, I will discuss the capabilities and limits of DNS of turbulent combustion and present some results of ignition/extinction characteristics of a highly diluted hydrogen flame counter-flowing against heated air. The results of our recent 3D-DNS of a spatially-developing turbulent lifted hydrogen jet flame in heated coflow will also be presented. The 3D-DNS was performed at a jet Reynolds number of 11,000 with {approx} 1 billion grid points, which required 3.5 million CPU hours on Cray XT3/XT4 at Oak Ridge National Laboratories.

  18. Experimental characterization of the constitutive materials of MgB2 multi-filamentary wires for the development of 3D numerical models

    NASA Astrophysics Data System (ADS)

    Escamez, Guillaume; Sirois, Frédéric; Tousignant, Maxime; Badel, Arnaud; Granger, Capucine; Tixador, Pascal; Bruzek, Christian-Éric

    2017-03-01

    Today MgB2 superconducting wires can be manufactured in long lengths at low cost, which makes this material a good candidate for large scale applications. However, because of its relatively low critical temperature (less than 40 K), it is necessary to operate MgB2 devices in a liquid or gaseous helium environment. In this context, losses in the cryogenic environment must be rigorously minimized, otherwise the use of a superconductor is not worthy. An accurate estimation of the losses at the design stage is therefore mandatory in order to allow determining the device architecture that minimizes the losses. In this paper, we present a complete a 3D finite element model of a 36-filament MgB2 wire based on the architecture of the Italian manufacturer Colombus. In order for the model to be as accurate as possible, we made a substantial effort to characterize all constitutive materials of the wire, namely the E–J characteristics of the MgB2 filaments and the electric and magnetic properties (B‑H curves) of nickel and monel, which are the two major non-superconducting components of the wire. All properties were characterized as a function of temperature and magnetic field. Limitations of the characterization and of the model are discussed, in particular the difficulty to extract the maximum relative permeability of nickel and monel from the experimental data, as well as the lack of a thin conductive layer model in the 3D finite element method, which prevents us from taking into account the resistive barriers around the MgB2 filaments in the matrix. Two examples of numerical simulations are provided to illustrate the capabilities of the model in its current state.

  19. Direct numerical simulations of vortex ring collisions

    NASA Astrophysics Data System (ADS)

    Ostilla Monico, Rodolfo; Pumir, Alain; Brenner, Michael

    2016-11-01

    We numerically simulate the ring vortex collision experiment of Lim and Nickels in an attempt to understand the rapid formation of very fine scale turbulence (or 'smoke') from relatively smooth initial conditions. Reynolds numbers of up to Re = Γ / ν = 7500 , where Γ is the vortex ring circulation and ν the kinematic viscosity of the fluid are reached, which coincide with the highest Reynolds number case of the experiments. Different perturbations to the ring vortex are added, and their effect on the generation and amplification of turbulence is quantified. The underlying dynamics of the vortex core is analyzed, and compared to the dynamics arising from a simple Biot-Savart filament model for the core.

  20. Advanced Tsunami Numerical Simulations and Energy Considerations by use of 3D-2D Coupled Models: The October 11, 1918, Mona Passage Tsunami

    NASA Astrophysics Data System (ADS)

    López-Venegas, Alberto M.; Horrillo, Juan; Pampell-Manis, Alyssa; Huérfano, Victor; Mercado, Aurelio

    2015-06-01

    The most recent tsunami observed along the coast of the island of Puerto Rico occurred on October 11, 1918, after a magnitude 7.2 earthquake in the Mona Passage. The earthquake was responsible for initiating a tsunami that mostly affected the northwestern coast of the island. Runup values from a post-tsunami survey indicated the waves reached up to 6 m. A controversy regarding the source of the tsunami has resulted in several numerical simulations involving either fault rupture or a submarine landslide as the most probable cause of the tsunami. Here we follow up on previous simulations of the tsunami from a submarine landslide source off the western coast of Puerto Rico as initiated by the earthquake. Improvements on our previous study include: (1) higher-resolution bathymetry; (2) a 3D-2D coupled numerical model specifically developed for the tsunami; (3) use of the non-hydrostatic numerical model NEOWAVE (non-hydrostatic evolution of ocean WAVE) featuring two-way nesting capabilities; and (4) comprehensive energy analysis to determine the time of full tsunami wave development. The three-dimensional Navier-Stokes model tsunami solution using the Navier-Stokes algorithm with multiple interfaces for two fluids (water and landslide) was used to determine the initial wave characteristic generated by the submarine landslide. Use of NEOWAVE enabled us to solve for coastal inundation, wave propagation, and detailed runup. Our results were in agreement with previous work in which a submarine landslide is favored as the most probable source of the tsunami, and improvement in the resolution of the bathymetry yielded inundation of the coastal areas that compare well with values from a post-tsunami survey. Our unique energy analysis indicates that most of the wave energy is isolated in the wave generation region, particularly at depths near the landslide, and once the initial wave propagates from the generation region its energy begins to stabilize.

  1. Radiochromic 3D Detectors

    NASA Astrophysics Data System (ADS)

    Oldham, Mark

    2015-01-01

    Radiochromic materials exhibit a colour change when exposed to ionising radiation. Radiochromic film has been used for clinical dosimetry for many years and increasingly so recently, as films of higher sensitivities have become available. The two principle advantages of radiochromic dosimetry include greater tissue equivalence (radiologically) and the lack of requirement for development of the colour change. In a radiochromic material, the colour change arises direct from ionising interactions affecting dye molecules, without requiring any latent chemical, optical or thermal development, with important implications for increased accuracy and convenience. It is only relatively recently however, that 3D radiochromic dosimetry has become possible. In this article we review recent developments and the current state-of-the-art of 3D radiochromic dosimetry, and the potential for a more comprehensive solution for the verification of complex radiation therapy treatments, and 3D dose measurement in general.

  2. Three-dimensional direct numerical simulation of electromagnetically driven multiscale shallow layer flows: Numerical modeling and physical properties

    NASA Astrophysics Data System (ADS)

    Lardeau, Sylvain; Ferrari, Simone; Rossi, Lionel

    2008-12-01

    Three-dimensional (3D) direct numerical simulations of a flow driven by multiscale electromagnetic forcing are performed in order to reproduce with maximum accuracy the quasi-two-dimensional (2D) flow generated by the same multiscale forcing in the laboratory. The method presented is based on a 3D description of the flow and the electromagnetic forcing. Very good agreements between our simulations and the experiments are found both on velocity and acceleration field, this last comparison being, to our knowledge, done for the first time. Such agreement requires that both experiments and simulations are carefully performed and, more importantly, that the underlying simplification to model the experiments and the multiscale electromagnetic forcing do not introduce significant errors. The results presented in this paper differ significantly from previous 2D direct numerical simulation in which a classical linear Rayleigh friction modeling term was used to mimic the effect of the wall-normal friction. Indeed, purely 2D simulations are found to underestimate the Reynolds number and, due to the dominance of nonhomogeneous bottom friction, lead to the wrong physical mechanism. For the range of conditions presented in this paper, the Reynolds number, defined by the ratio between acceleration and viscous terms, remains the order of unity, and the Hartmann number, defined by the ratio between electromagnetic force terms and viscous terms, is about 2. The main conclusion is that 3D simulations are required to model the (3D) electromagnetic forces and the wall-normal shear. Indeed, even if the flow is quasi-2D in terms of energy, a full 3D approach is required to simulate these shallow layer flows driven by multiscale electromagnetic forcing. In the range of forcing intensity investigated in this paper, these multiscale flows remain quasi-2D, with negligible energy in the wall-normal velocity component. It is also shown that the driving terms are the electromagnetic forcing and

  3. 3D numerical study of the propagation characteristics of a consequence of coronal mass ejections in a structured ambient solar wind

    NASA Astrophysics Data System (ADS)

    Zhou, Y.; Feng, X. S.

    2015-12-01

    CMEs have been identified as a prime causal link between solar activity and large, nonrecurrent geomagnetic storm. In order to improve geomagnetic storm predictions, a careful study of CME's propagation characteristics is important. Here, we analyze and quantitatively study the evolution and propagation characteristics of coronal mass ejections (CMEs) launched at several positions into a structured real ambient solar wind by using a three-dimensional (3D) numerical magnetohydrodynamics (MHD) simulation. The ambient solar wind structure during Carrington rotation 2095 is selected, which is an appropriate around activity minimum and declining phase. The CME is initiated by a simple spherical plasmoid model: a spheromak magnetic structure with high speed, high pressure and high plasma density plasmoid. We present a detailed analysis of the plasma, magnetic field, geoeffectiveness, and composition signatures of these CMEs. Results show that the motion and local appearance of a CME in interplanetary space is strongly affected by its interaction with the background solar wind structure, including its velocity, density, and magnetic structures. The simulations show that the initial launched position substantially affects the IP evolution of the CMEs influencing the propagation velocity, the shape, the trajectory and even the geo-effectiveness

  4. Stress evolution and dynamics of the lithosphere from 2-D and 3-D numerical models of long-term tectonic processes.

    NASA Astrophysics Data System (ADS)

    Kaus, B. J.

    2007-12-01

    The processes that generate stress in the lithosphere are incompletely understood. Whereas it is obvious that lithospheric deformation (and topography) is ultimately caused by cooling of the Earth from the time of formation, it is less clear how lithospheric deformation is coupled to mantle flow and how this affect stresses. Part of this is due to the somewhat complicated rheology of the lithosphere, which varies from brittle (elastoplastic) to ductile (viscous). In addition, vertical layering of the lithosphere may give rise to instabilities which affect its dynamics and stress evolution in a non-trivial manner. Obtaining a better insight in these processes thus requires numerical tools that can model the mantle-lithosphere system in a self-consistent manner (i.e. in a single computational domain) including topographic effects (i.e. free surface) and viscoelastoplastic rheologies. I have recently developed 2-D and 3-D numerical tools that incorporate the above mentioned features. Here I focus on a number of case studies to illustrate how differences in rheology and boundary conditions alter the dynamics and in particular the stress evolution of the lithosphere. Instabilities such as bending or buckling of compressed lithosphere reduce the average stress ('structural weakening"). Viscoelasticity results in time- dependencies, which are particularly pronounced in highly viscous parts of the lithosphere (e.g. the mantle lithosphere). Strong parts of the lithospere thus don't necessarily have large differential stresses (and earthquakes). The Christmas-tree approximation should therefore be used with care to infer stress levels in the lithosphere. Finally I will illustrate differences in stresses between "kinematically-driven" and "internally-driven" lithospheric- scale deformation models.

  5. PSH3D fast Poisson solver for petascale DNS

    NASA Astrophysics Data System (ADS)

    Adams, Darren; Dodd, Michael; Ferrante, Antonino

    2016-11-01

    Direct numerical simulation (DNS) of high Reynolds number, Re >= O (105) , turbulent flows requires computational meshes >= O (1012) grid points, and, thus, the use of petascale supercomputers. DNS often requires the solution of a Helmholtz (or Poisson) equation for pressure, which constitutes the bottleneck of the solver. We have developed a parallel solver of the Helmholtz equation in 3D, PSH3D. The numerical method underlying PSH3D combines a parallel 2D Fast Fourier transform in two spatial directions, and a parallel linear solver in the third direction. For computational meshes up to 81923 grid points, our numerical results show that PSH3D scales up to at least 262k cores of Cray XT5 (Blue Waters). PSH3D has a peak performance 6 × faster than 3D FFT-based methods when used with the 'partial-global' optimization, and for a 81923 mesh solves the Poisson equation in 1 sec using 128k cores. Also, we have verified that the use of PSH3D with the 'partial-global' optimization in our DNS solver does not reduce the accuracy of the numerical solution of the incompressible Navier-Stokes equations.

  6. Direct growth of carbon nanofibers to generate a 3D porous platform on a metal contact to enable an oxygen reduction reaction.

    PubMed

    Pan, David; Ombaba, Matthew; Zhou, Zhi-You; Liu, Yang; Chen, Shaowei; Lu, Jennifer

    2012-12-21

    For carbon nanotube-based electronics to achieve their full performance potential, it is imperative to minimize the contact resistance between macroscale metal contacts and the carbon nanotube (CNT) nanoelectrodes. We have developed a three-dimensional electrode platform that consists of carbon nanofibers (CNFs) that are directly grown on a metal contact, such as copper (Cu). Carbon nanofiber morphology can be tailored by adjusting the annealing time of a thin electrochemically deposited nickel catalyst layer on copper. We demonstrate that increasing the annealing time increases the amount of copper infused into the nickel catalyst layer. This reduces the carbon deposition rate, and consequently a more well-defined CNF 3D architecture can be fabricated. This direct growth of CNFs on a Cu substrate yields an excellent electron transfer pathway, with contact resistance between CNFs and Cu being comparable to that of a Cu-Cu interface. Furthermore, the excellent bonding strength between CNFs and Cu can be maintained over prolonged periods of ultrasonication. The porous 3D platform affixed with intertwined CNFs allows facile surface functionalization. Using a simple solution soaking procedure, the CNF surface has been successfully functionalized with iron(II) phthalocyanine (FePc). FePc functionalized CNFs exhibit excellent oxygen reduction capability, equivalent to platinum-carbon electrodes. This result demonstrates the technological promise of this new 3D electrode platform that can be exploited in other applications that include sensing, battery, and supercapacitors.

  7. Regulation of adipose-tissue-derived stromal cell orientation and motility in 2D- and 3D-cultures by direct-current electrical field.

    PubMed

    Yang, Gang; Long, Haiyan; Ren, Xiaomei; Ma, Kunlong; Xiao, Zhenghua; Wang, Ying; Guo, Yingqiang

    2017-02-01

    Cell alignment and motility play a critical role in a variety of cell behaviors, including cytoskeleton reorganization, membrane-protein relocation, nuclear gene expression, and extracellular matrix remodeling. Direct current electric field (EF) in vitro can direct many types of cells to align vertically to EF vector. In this work, we investigated the effects of EF stimulation on rat adipose-tissue-derived stromal cells (ADSCs) in 2D-culture on plastic culture dishes and in 3D-culture on various scaffold materials, including collagen hydrogels, chitosan hydrogels and poly(L-lactic acid)/gelatin electrospinning fibers. Rat ADSCs were exposed to various physiological-strength EFs in a homemade EF-bioreactor. Changes of morphology and movements of cells affected by applied EFs were evaluated by time-lapse microphotography, and cell survival rates and intracellular calcium oscillations were also detected. Results showed that EF facilitated ADSC morphological changes, under 6 V/cm EF strength, and that ADSCs in 2D-culture aligned vertically to EF vector and kept a good cell survival rate. In 3D-culture, cell galvanotaxis responses were subject to the synergistic effect of applied EF and scaffold materials. Fast cell movement and intracellular calcium activities were observed in the cells of 3D-culture. We believe our research will provide some experimental references for the future study in cell galvanotaxis behaviors.

  8. A novel 3D Ag(I)-MOF: Surfactant-directed syntheses and catalytic degradation of o/m/p-Nitrophenol

    NASA Astrophysics Data System (ADS)

    Wu, Xue-Qian; Wen, Guo-Xuan; Wu, Ya-Pan; Dong, Wen-Wen; Zhao, Jun; Li, Dong-Sheng

    2016-10-01

    For the first time, sodium caprylate has been investigated to direct the crystal growth of 3D Ag-MOF, [Ag2(ddcba)(4,4‧-bipy)2] (1), constructing from 3,5-(di(2‧,5‧-dicarboxylphenyl)benozoic acid and 4,4‧-bipy. The single crystal diffraction analyses shows that complex 1 possess 3D neutral framework with a three-connected ThSi2 (103-b) topology. Compound 1 exhibits predominant catalytic activity towards the degradation of o-Nitrophenol (ONP), m-Nitrophenol (MNP) and p-Nitrophenol (PNP) in aqueous solution. The kinetics of such catalytic degradation reactions was also studied.

  9. 3D Numerical Simulation of the Wave and Current Loads on a Truss Foundation of the Offshore Wind Turbine During the Extreme Typhoon Event

    NASA Astrophysics Data System (ADS)

    Lin, C. W.; Wu, T. R.; Chuang, M. H.; Tsai, Y. L.

    2015-12-01

    The wind in Taiwan Strait is strong and stable which offers an opportunity to build offshore wind farms. However, frequently visited typhoons and strong ocean current require more attentions on the wave force and local scour around the foundation of the turbine piles. In this paper, we introduce an in-house, multi-phase CFD model, Splash3D, for solving the flow field with breaking wave, strong turbulent, and scour phenomena. Splash3D solves Navier-Stokes Equation with Large-Eddy Simulation (LES) for the fluid domain, and uses volume of fluid (VOF) with piecewise linear interface reconstruction (PLIC) method to describe the break free-surface. The waves were generated inside the computational domain by internal wave maker with a mass-source function. This function is designed to adequately simulate the wave condition under observed extreme events based on JONSWAP spectrum and dispersion relationship. Dirichlet velocity boundary condition is assigned at the upper stream boundary to induce the ocean current. At the downstream face, the sponge-layer method combined with pressure Dirichlet boundary condition is specified for dissipating waves and conducting current out of the domain. Numerical pressure gauges are uniformly set on the structure surface to obtain the force distribution on the structure. As for the local scour around the foundation, we developed Discontinuous Bi-viscous Model (DBM) for the development of the scour hole. Model validations were presented as well. The force distribution under observed irregular wave condition was extracted by the irregular-surface force extraction (ISFE) method, which provides a fast and elegant way to integrate the force acting on the surface of irregular structure. From the Simulation results, we found that the total force is mainly induced by the impinging waves, and the force from the ocean current is about 2 order of magnitude smaller than the wave force. We also found the dynamic pressure, wave height, and the

  10. Met.3D - a new open-source tool for interactive 3D visualization of ensemble weather forecasts

    NASA Astrophysics Data System (ADS)

    Rautenhaus, Marc; Kern, Michael; Schäfler, Andreas; Westermann, Rüdiger

    2015-04-01

    We introduce Met.3D, a new open-source tool for the interactive 3D visualization of numerical ensemble weather predictions. The tool has been developed to support weather forecasting during aircraft-based atmospheric field campaigns, however, is applicable to further forecasting, research and teaching activities. Our work approaches challenging topics related to the visual analysis of numerical atmospheric model output -- 3D visualisation, ensemble visualization, and how both can be used in a meaningful way suited to weather forecasting. Met.3D builds a bridge from proven 2D visualization methods commonly used in meteorology to 3D visualization by combining both visualization types in a 3D context. It implements methods that address the issue of spatial perception in the 3D view as well as approaches to using the ensemble in order to assess forecast uncertainty. Interactivity is key to the Met.3D approach. The tool uses modern graphics hardware technology to achieve interactive visualization of present-day numerical weather prediction datasets on standard consumer hardware. Met.3D supports forecast data from the European Centre for Medium Range Weather Forecasts and operates directly on ECMWF hybrid sigma-pressure level grids. In this presentation, we provide an overview of the software --illustrated with short video examples--, and give information on its availability.

  11. GPU-Accelerated Forward and Back-Projections with Spatially Varying Kernels for 3D DIRECT TOF PET Reconstruction.

    PubMed

    Ha, S; Matej, S; Ispiryan, M; Mueller, K

    2013-02-01

    We describe a GPU-accelerated framework that efficiently models spatially (shift) variant system response kernels and performs forward- and back-projection operations with these kernels for the DIRECT (Direct Image Reconstruction for TOF) iterative reconstruction approach. Inherent challenges arise from the poor memory cache performance at non-axis aligned TOF directions. Focusing on the GPU memory access patterns, we utilize different kinds of GPU memory according to these patterns in order to maximize the memory cache performance. We also exploit the GPU instruction-level parallelism to efficiently hide long latencies from the memory operations. Our experiments indicate that our GPU implementation of the projection operators has slightly faster or approximately comparable time performance than FFT-based approaches using state-of-the-art FFTW routines. However, most importantly, our GPU framework can also efficiently handle any generic system response kernels, such as spatially symmetric and shift-variant as well as spatially asymmetric and shift-variant, both of which an FFT-based approach cannot cope with.

  12. Investigation on viewing direction dependent detectability in a reconstructed 3D volume for a cone beam CT system

    NASA Astrophysics Data System (ADS)

    Park, Junhan; Lee, Changwoo; Baek, Jongduk

    2015-03-01

    In medical imaging systems, several factors (e.g., reconstruction algorithm, noise structures, target size, contrast, etc) affect the detection performance and need to be considered for object detection. In a cone beam CT system, FDK reconstruction produces different noise structures in axial and coronal slices, and thus we analyzed directional dependent detectability of objects using detection SNR of Channelized Hotelling observer. To calculate the detection SNR, difference-of-Gaussian channel model with 10 channels was implemented, and 20 sphere objects with different radius (i.e., 0.25 (mm) to 5 (mm) equally spaced by 0.25 (mm)), reconstructed by FDK algorithm, were used as object templates. Covariance matrix in axial and coronal direction was estimated from 3000 reconstructed noise volumes, and then the SNR ratio between axial and coronal direction was calculated. Corresponding 2D noise power spectrum was also calculated. The results show that as the object size increases, the SNR ratio decreases, especially lower than 1 when the object size is larger than 2.5 mm radius. The reason is because the axial (coronal) noise power is higher in high (low) frequency band, and therefore the detectability of a small (large) object is higher in coronal (axial) images. Our results indicate that it is more beneficial to use coronal slices in order to improve the detectability of a small object in a cone beam CT system.

  13. GPU-Accelerated Forward and Back-Projections with Spatially Varying Kernels for 3D DIRECT TOF PET Reconstruction

    PubMed Central

    Ha, S.; Matej, S.; Ispiryan, M.; Mueller, K.

    2013-01-01

    We describe a GPU-accelerated framework that efficiently models spatially (shift) variant system response kernels and performs forward- and back-projection operations with these kernels for the DIRECT (Direct Image Reconstruction for TOF) iterative reconstruction approach. Inherent challenges arise from the poor memory cache performance at non-axis aligned TOF directions. Focusing on the GPU memory access patterns, we utilize different kinds of GPU memory according to these patterns in order to maximize the memory cache performance. We also exploit the GPU instruction-level parallelism to efficiently hide long latencies from the memory operations. Our experiments indicate that our GPU implementation of the projection operators has slightly faster or approximately comparable time performance than FFT-based approaches using state-of-the-art FFTW routines. However, most importantly, our GPU framework can also efficiently handle any generic system response kernels, such as spatially symmetric and shift-variant as well as spatially asymmetric and shift-variant, both of which an FFT-based approach cannot cope with. PMID:23531763

  14. Investigation of lightning flash morphologies along the entire supercell life cycle using a numerical 3D cloud resolving model(CRM).

    NASA Astrophysics Data System (ADS)

    Molinié, G.; Escobar, J.; Gazin, D.

    2008-12-01

    A stochastic lightning flash scheme has been implemented in line in a meso-sca le CRM. It is fully parallelized and vectorized. In this model, a lightning flash is schematized as two single conducting channels (single tracks) propagating in opposite directions from the lightning ignition point. Branch patterns propagate from the single channels. On the base of scale similarities between discharges in dielectrics at centimeter scales and lightning flashes, the stochastic scheme has been designed to compute branch trajec tories. Physical considerations and branch fractal dimensions compel branch trajectories. The charge neutralization operates along the single tracks and branches to threshold the cloud electrical charge. First, an assessment of the scheme will be presented in simple 2D configurations. Second, we will describe comprehensive 3D-thundercloud life-cycle simulations including cloud electrification and lightning discharges. Lightning flash patterns are analyzed through statistics of their effective fractal dimension. It is shown that paradoxically, lightning flashes with quasi-plane branch propagation (fractal dimension close to 2) lead to more steady electrical behavior than those completely filling volumes (fractal dimension close to 3).

  15. Effects of in-pulse transverse relaxation in 3D ultrashort echo time sequences: analytical derivation, comparison to numerical simulation and experimental application at 3T.

    PubMed

    Springer, Fabian; Steidle, Günter; Martirosian, Petros; Claussen, Claus D; Schick, Fritz

    2010-09-01

    The introduction of ultrashort-echo-time-(UTE)-sequences to clinical whole-body MR scanners has opened up the field of MR characterization of materials or tissues with extremely fast signal decay. If the transverse relaxation time is in the range of the RF-pulse duration, approximation of the RF-pulse by an instantaneous rotation applied at the middle of the RF-pulse and immediately followed by free relaxation will lead to a distinctly underestimated echo signal. Thus, the regular Ernst equation is not adequate to correctly describe steady state signal under those conditions. The paper presents an analytically derived modified Ernst equation, which correctly describes in-pulse relaxation of transverse magnetization under typical conditions: The equation is valid for rectangular excitation pulses, usually applied in 3D UTE sequences. Longitudinal relaxation time of the specimen must be clearly longer than RF-pulse duration, which is fulfilled for tendons and bony structures as well as many solid materials. Under these conditions, the proposed modified Ernst equation enables adequate and relatively simple calculation of the magnetization of materials or tissues. Analytically derived data are compared to numerical results obtained by using an established Runge-Kutta-algorithm based on the Bloch equations. Validity of the new approach was also tested by systematical measurements of a solid polymeric material on a 3T whole-body MR scanner. Thus, the presented modified Ernst equation provides a suitable basis for T1 measurements, even in tissues with T2 values as short as the RF-pulse duration: independent of RF-pulse duration, the 'variable flip angle method' led to consistent results of longitudinal relaxation time T1, if the T2 relaxation time of the material of interest is known as well.

  16. Directionally controlled 3D ferroelectric single crystal growth in LaBGeO5 glass by femtosecond laser irradiation.

    PubMed

    Stone, Adam; Sakakura, Masaaki; Shimotsuma, Yasuhiko; Stone, Greg; Gupta, Pradyumna; Miura, Kiyotaka; Hirao, Kazuyuki; Dierolf, Volkmar; Jain, Himanshu

    2009-12-07

    Laser-fabrication of complex, highly oriented three-dimensional ferroelectric single crystal architecture with straight lines and bends is demonstrated in lanthanum borogermanate model glass using a high repetition rate femtosecond laser. Scanning micro-Raman microscopy shows that the c-axis of the ferroelectric crystal is aligned with the writing direction even after bending. A gradual rather than an abrupt transition is observed for the changing lattice orientation through bends up to approximately 14 degrees. Thus the single crystal character of the line is preserved along the bend through lattice straining rather than formation of a grain boundary.

  17. Holographic 3D display observable for multiple simultaneous viewers from all horizontal directions by using a time division method.

    PubMed

    Sando, Yusuke; Barada, Daisuke; Yatagai, Toyohiko

    2014-10-01

    A holographic three-dimensional display system with a viewing angle of 360°, by using a high-speed digital micromirror device (DMD), has been proposed. The wavefront modulated by the DMD enters a rotating mirror tilted vertically downward. The synchronization of the rotating mirror and holograms displayed on the DMD allows for the reconstruction of a wavefront propagating in all horizontal directions. An optical experiment has been demonstrated in order to verify our proposed system. Binocular vision is realized from anywhere within the horizontal plane. Our display system enables simultaneous observation by multiple viewers at an extremely close range.

  18. Numerical simulations of the ablative Rayleigh-Taylor instability in planar inertial-confinement-fusion targets using the FastRad3D code

    NASA Astrophysics Data System (ADS)

    Bates, J. W.; Schmitt, A. J.; Karasik, M.; Zalesak, S. T.

    2016-12-01

    The ablative Rayleigh-Taylor (RT) instability is a central issue in the performance of laser-accelerated inertial-confinement-fusion targets. Historically, the accurate numerical simulation of this instability has been a challenging task for many radiation hydrodynamics codes, particularly when it comes to capturing the ablatively stabilized region of the linear dispersion spectrum and modeling ab initio perturbations. Here, we present recent results from two-dimensional numerical simulations of the ablative RT instability in planar laser-ablated foils that were performed using the Eulerian code FastRad3D. Our study considers polystyrene, (cryogenic) deuterium-tritium, and beryllium target materials, quarter- and third-micron laser light, and low and high laser intensities. An initial single-mode surface perturbation is modeled in our simulations as a small modulation to the target mass density and the ablative RT growth-rate is calculated from the time history of areal-mass variations once the target reaches a steady-state acceleration. By performing a sequence of such simulations with different perturbation wavelengths, we generate a discrete dispersion spectrum for each of our examples and find that in all cases the linear RT growth-rate γ is well described by an expression of the form γ = α [ k g / ( 1 + ɛ k L m ) ] 1 / 2 - β k V a , where k is the perturbation wavenumber, g is the acceleration of the target, Lm is the minimum density scale-length, Va is the ablation velocity, and ɛ is either one or zero. The dimensionless coefficients α and β in the above formula depend on the particular target and laser parameters and are determined from two-dimensional simulation results through the use of a nonlinear curve-fitting procedure. While our findings are generally consistent with those of Betti et al. (Phys. Plasmas 5, 1446 (1998)), the ablative RT growth-rates predicted in this investigation are somewhat smaller than the values previously reported for the

  19. Novel metrology methods for fast 3D characterization of directed self-assembly (DSA) patterns for high volume manufacturing

    NASA Astrophysics Data System (ADS)

    Sarma, Chandra; Bunday, Benjamin; Cepler, Aron; Dziura, Ted; Kim, JiHoon; Lin, Guanyang; Yin, Jian

    2014-04-01

    One of the major challenges associated with insertion of a directed self-assembly (DSA) patterning process in high volume manufacturing (HVM) is finding a non-destructive, yield-compatible, consistent critical dimension (CD) metrology process. Current CD scanning electron microscopy (CD-SEM) top-down approaches do not give the profile information for DSA patterns, which is paramount in determining the subsequent pattern transfer process (etch, for example). SEMATECH, in cooperation with some of the leaders of the metrology and DSA materials supply chain, has led an effort to address such metrology challenges in DSA. We have developed and evaluated several techniques (including a scatterometry-based method) that are potentially very attractive in determining DSA pattern profiles and have embedded bridging in such patterns without resorting to destructive cross-section imaging. We show how such processes could be fine-tuned to enable their insertion for DSA pattern characterization in an HVM environment.

  20. High-speed 3-D measurement with a large field of view based on direct-view confocal microscope with an electrically tunable lens.

    PubMed

    Jeong, Hyeong-jun; Yoo, Hongki; Gweon, DaeGab

    2016-02-22

    We propose a new structure of confocal imaging system based on a direct-view confocal microscope (DVCM) with an electrically tunable lens (ETL). Since it has no mechanical moving parts to scan both the lateral (x-y) and axial (z) directions, the DVCM with an ETL allows for high-speed 3-dimensional (3-D) imaging. Axial response and signal intensity of the DVCM were analyzed theoretically according to the pinhole characteristics. The system was designed to have an isotropic spatial resolution of 20 µm in both lateral and axial direction with a large field of view (FOV) of 10 × 10 mm. The FOV was maintained according to the various focal shifts as a result of an integrated design of an objective lens with the ETL. The developed system was calibrated to have linear focal shift over a range of 9 mm with an applied current to the ETL. The system performance of 3-D volume imaging was demonstrated using standard height specimens and a dental plaster.

  1. 3-D Numerical Simulation and Analysis of Complex Fiber Geometry RaFC Materials with High Volume Fraction and High Aspect Ratio based on ABAQUS PYTHON

    NASA Astrophysics Data System (ADS)

    Jin, BoCheng

    2011-12-01

    Organic and inorganic fiber reinforced composites with innumerable fiber orientation distributions and fiber geometries are abundantly available in several natural and synthetic structures. Inorganic glass fiber composites have been introduced to numerous applications due to their economical fabrication and tailored structural properties. Numerical characterization of such composite material systems is necessitated due to their intrinsic statistical nature, which renders extensive experimentation prohibitively time consuming and costly. To predict various mechanical behavior and characterizations of Uni-Directional Fiber Composites (UDFC) and Random Fiber Composites (RaFC), we numerically developed Representative Volume Elements (RVE) with high accuracy and efficiency and with complex fiber geometric representations encountered in uni-directional and random fiber networks. In this thesis, the numerical simulations of unidirectional RaFC fiber strand RVE models (VF>70%) are first presented by programming in ABAQUS PYTHON. Secondly, when the cross sectional aspect ratios (AR) of the second phase fiber inclusions are not necessarily one, various types of RVE models with different cross sectional shape fibers are simulated and discussed. A modified random sequential absorption algorithm is applied to enhance the volume fraction number (VF) of the RVE, which the mechanical properties represents the composite material. Thirdly, based on a Spatial Segment Shortest Distance (SSSD) algorithm, a 3-Dimentional RaFC material RVE model is simulated in ABAQUS PYTHON with randomly oriented and distributed straight fibers of high fiber aspect ratio (AR=100:1) and volume fraction (VF=31.8%). Fourthly, the piecewise multi-segments fiber geometry is obtained in MATLAB environment by a modified SSSD algorithm. Finally, numerical methods including the polynomial curve fitting and piecewise quadratic and cubic B-spline interpolation are applied to optimize the RaFC fiber geometries

  2. Regulation of signaling directionality revealed by 3D snapshots of a kinase:regulator complex in action

    PubMed Central

    Trajtenberg, Felipe; Imelio, Juan A; Machado, Matías R; Larrieux, Nicole; Marti, Marcelo A; Obal, Gonzalo; Mechaly, Ariel E; Buschiazzo, Alejandro

    2016-01-01

    Two-component systems (TCS) are protein machineries that enable cells to respond to input signals. Histidine kinases (HK) are the sensory component, transferring information toward downstream response regulators (RR). HKs transfer phosphoryl groups to their specific RRs, but also dephosphorylate them, overall ensuring proper signaling. The mechanisms by which HKs discriminate between such disparate directions, are yet unknown. We now disclose crystal structures of the HK:RR complex DesK:DesR from Bacillus subtilis, comprising snapshots of the phosphotransfer and the dephosphorylation reactions. The HK dictates the reactional outcome through conformational rearrangements that include the reactive histidine. The phosphotransfer center is asymmetric, poised for dissociative nucleophilic substitution. The structural bases of HK phosphatase/phosphotransferase control are uncovered, and the unexpected discovery of a dissociative reactional center, sheds light on the evolution of TCS phosphotransfer reversibility. Our findings should be applicable to a broad range of signaling systems and instrumental in synthetic TCS rewiring. DOI: http://dx.doi.org/10.7554/eLife.21422.001 PMID:27938660

  3. 3D Numerical Simulation of the Geothermal Field of Permafrost at Salluit in Nunavik, Québec, in Response to Climate Warming. Research in Progress.

    NASA Astrophysics Data System (ADS)

    Fortier, R.; Allard, M.; Gagnon, O.

    2002-12-01

    survey aims at providing information on the geological and geotechnical characteristics of permafrost. Thermistor cables in deep boreholes, meteorological stations, dataloggers for the measurement of surface temperature, and thermal probes have been also installed in the valley. Air photographs will be used to produce a digital terrain model of the valley. This integrated multi-technique approach is essential for properly assessing the permafrost conditions in the valley. The study will provide the data needed for the development of a 3D model of permafrost conditions in the valley. A 3D numerical simulation of the geothermal field of permafrost in the valley will be then undertaken. This simulation is a major challenge giving the size of the thermal field and the variability in permafrost conditions. The impacts of climate warming on the thermal field of permafrost will be simulated and predicted by forcing the surface temperature to increase following different scenarios of climate warming. It is planned to combine the geotechnical properties and the simulation of the geothermal field of permafrost in order to define threshold values of permafrost strength and slope instability and set a pre-warning scheme of permafrost temperature in case of further warming in the coming years. The monitoring of permafrost temperature will be continued in the future. If the scheme is reached, actions can be then undertaken to mitigate the impacts of climate warming on the infrastructures and protect the population of Salluit.

  4. 3-D Modeling of Directional Solidification of a Non-Dilute Alloy with Temperature and Concentration Fields Coupling via Materials Properties Dependence and via Double Diffusive Convection

    NASA Technical Reports Server (NTRS)

    Bune, Andris V.; Gillies, Donald C.; Lehoczky, Sandor L.

    1998-01-01

    Numerical simulation of the HgCdTe growth by the vertical Bridgman method was performed using FIDAP finite element code. Double-diffusive melt convection is analyzed, as the primary factor at controls inhomogeneity of the solidified material. Temperature and concentration fields in the model are also coupled via material properties, such as thermal and solutal expansion coefficients with the dependence on both temperature and concentration, and melting temperature evaluation from pseudobinary CdTe-HgTe phase diagram. Experimental measurements were used to obtain temperature boundary conditions. Parametric study of the melt convection dependence on the gravity conditions was undertaken. It was found, that the maximum convection velocity in the melt can be reduced under certain conditions. Optimal conditions to obtain a near flat solidified interface are discussed. The predicted interface shape is in agreement with one obtained experimentally by quenching. The results of 3-D calculations are compared with previous 2- D findings. A video film featuring 3-D melt convection will be presented.

  5. Artificial Neural Networks as a powerful numerical tool to classify specific features of a tooth based on 3D scan data.

    PubMed

    Raith, Stefan; Vogel, Eric Per; Anees, Naeema; Keul, Christine; Güth, Jan-Frederik; Edelhoff, Daniel; Fischer, Horst

    2017-01-01

    Chairside manufacturing based on digital image acquisition is gainingincreasing importance in dentistry. For the standardized application of these methods, it is paramount to have highly automated digital workflows that can process acquired 3D image data of dental surfaces. Artificial Neural Networks (ANNs) arenumerical methods primarily used to mimic the complex networks of neural connections in the natural brain. Our hypothesis is that an ANNcan be developed that is capable of classifying dental cusps with sufficient accuracy. This bears enormous potential for an application in chairside manufacturing workflows in the dental field, as it closes the gap between digital acquisition of dental geometries and modern computer-aided manufacturing techniques.Three-dimensional surface scans of dental casts representing natural full dental arches were transformed to range image data. These data were processed using an automated algorithm to detect candidates for tooth cusps according to salient geometrical features. These candidates were classified following common dental terminology and used as training data for a tailored ANN.For the actual cusp feature description, two different approaches were developed and applied to the available data: The first uses the relative location of the detected cusps as input data and the second method directly takes the image information given in the range images. In addition, a combination of both was implemented and investigated.Both approaches showed high performance with correct classifications of 93.3% and 93.5%, respectively, with improvements by the combination shown to be minor.This article presents for the first time a fully automated method for the classification of teeththat could be confirmed to work with sufficient precision to exhibit the potential for its use in clinical practice,which is a prerequisite for automated computer-aided planning of prosthetic treatments with subsequent automated chairside manufacturing.

  6. Synthesizing 2D and 3D Selenidostannates in Ionic Liquids: The Synergistic Structure-Directing Effects of Ionic Liquids and Metal-Amine Complexes.

    PubMed

    Du, Cheng-Feng; Shen, Nan-Nan; Li, Jian-Rong; Hao, Min-Ting; Wang, Zi; Huang, Xiao-Ying

    2016-05-20

    Presented are the ionothermal syntheses, characterizations, and properties of a series of two- and three-dimensional selenidostannate compounds synergistically directed by metal-amine complex (MAC) cations and ionic liquids (ILs) of [Bmmim]Cl (Bmmim=1-butyl-2,3-dimethylimidazolium). Four selenidostannates, namely, 2D-(Bmmim)3 [Ni(en)3 ]2 [Sn9 Se21 ]Cl (1, en=ethylenediamine), 2D-(Bmmim)8 [Ni2 (teta)2 (μ-teta)]Sn18 Se42 (2, teta=triethylenetetramine), 2D-(Bmmim)4 [Ni(tepa)Cl]2 [Ni(tepa)Sn12 Se28 ] (3, tepa=tetraethylenepentamine), and 3D-(Bmmim)2 [Ni(1,2-pda)3 ]Sn8 Se18 (4, 1,2-pda=1,2-diaminopropane), were obtained. Single-crystal X-ray diffraction analyses revealed that compounds 1 and 2 possess a lamellar anionic [Sn3 Se7 ]n (2n-) structure comprising distinct eight-membered ring units, whereas 3 features a MAC-decorated anionic [Ni(tepa)Sn12 Se28 ]n (6n-) layered structure. In contrast to 1-3, compound 4 exhibits a 3D open framework of anionic [Sn4 Se9 ]n (2n-) . The structural variation from 1 to 4 clearly indicates that on the basis of the synergistic structure-directing ability of the MACs and ILs, variation of the organic polyamine ligand has a significant impact on the formation of selenidostannates.

  7. Molecular tectonics: self-complementary supramolecular Se...N synthons directing assembly of 1D silver chains into 3D porous molecular architectures.

    PubMed

    Zhou, Ai-Ju; Zheng, Shao-Liang; Fang, Yue; Tong, Ming-Liang

    2005-06-27

    Reaction of 2,1,3-benzoselenadiazole (bsd) with AgNO3 results in the formation of a novel model example of a Se...N synthon directed molecular network of different polymorphs at different temperatures. Alpha-[Ag(bsd)2(NO3)] x 0.5bsd formed at ambient temperature, has a 3D porous molecular network constructed with monomeric [Ag(bsd)2(NO3)] motif, and has 1D channels that are encapsulated with 1D arrays of two-fold-disordered dimeric (bsd)2 guests aggregated by the self-complementary nonbonded Se...N interactions. This is the first molecular net directed by supramolecular Se...N synthons. The second polymorph, beta-[Ag(bsd)2(NO3)] x 0.5bsd, formed from an analogous reaction at 50 degrees C, contains a similar 3D molecular network constructed with tetrameric [Ag4(bsd)8(NO3)4] motif and 1D arrays of well-ordered dimeric (bsd)2 guests are encapsulated in the channels. Such ordered (bsd)2 dimers provide an excellent simplified dimeric model for MO calculations of intermolecular nonbonded Se...N interactions.

  8. Quantification of the postural and technical errors in asymptomatic adults using direct 3D whole body scan measurements of standing posture.

    PubMed

    Tomkinson, Grant R; Shaw, Linda G

    2013-02-01

    Measurement repeatability has important decision-making implications for clinicians and researchers when assessing individuals. The aims of this study were to quantify: (a) the repeatability of direct measurements of standing posture using three dimensional (3D) whole body scanning, and (b) the magnitude of the postural and technical errors involved. Fifty-two asymptomatic adults were scanned twice, 24h apart, using the Vitus Smart 3D whole body scanner. Eleven clinically relevant standing postural measurements were calculated from scan-extracted data. The process was repeated with 10 shop mannequins. Systematic error was expressed as absolute changes in means and as standardised effect sizes, with random (within-subject) error expressed as the typical error. Technical error was calculated as the typical error in the measurement of mannequins; total error as the typical error in the measurement of subjects; and postural error as the square root of the difference between the squared total error and the squared technical error. Most standing postural measurements demonstrated good repeatability, with median (95% CI) systematic and random errors of -0.1° (1.1°) and 2.8° (1.9°), respectively. However, head and neck postures demonstrated poor repeatability due to large random errors brought about by large postural errors. Overall, most of the error was due to postural error rather than technical error. The relatively small technical errors highlight that this 3D measurement process is generally repeatable, while the relatively large postural errors related to the head and neck suggest that these postures probably lack the precision to be clinically useful using this procedure.

  9. Investigation of Hill's optical turbulence model by means of direct numerical simulation.

    PubMed

    Muschinski, Andreas; de Bruyn Kops, Stephen M

    2015-12-01

    For almost four decades, Hill's "Model 4" [J. Fluid Mech. 88, 541 (1978) has played a central role in research and technology of optical turbulence. Based on Batchelor's generalized Obukhov-Corrsin theory of scalar turbulence, Hill's model predicts the dimensionless function h(κl(0), Pr) that appears in Tatarskii's well-known equation for the 3D refractive-index spectrum in the case of homogeneous and isotropic turbulence, Φn(κ)=0.033C2(n)κ(-11/3) h(κl(0), Pr). Here we investigate Hill's model by comparing numerical solutions of Hill's differential equation with scalar spectra estimated from direct numerical simulation (DNS) output data. Our DNS solves the Navier-Stokes equation for the 3D velocity field and the transport equation for the scalar field on a numerical grid containing 4096(3) grid points. Two independent DNS runs are analyzed: one with the Prandtl number Pr=0.7 and a second run with Pr=1.0 . We find very good agreement between h(κl(0), Pr) estimated from the DNS output data and h(κl(0), Pr) predicted by the Hill model. We find that the height of the Hill bump is 1.79 Pr(1/3), implying that there is no bump if Pr<0.17 . Both the DNS and the Hill model predict that the viscous-diffusive "tail" of h(κl(0), Pr) is exponential, not Gaussian.

  10. 3D Computations and Experiments

    SciTech Connect

    Couch, R; Faux, D; Goto, D; Nikkel, D

    2004-04-05

    This project consists of two activities. Task A, Simulations and Measurements, combines all the material model development and associated numerical work with the materials-oriented experimental activities. The goal of this effort is to provide an improved understanding of dynamic material properties and to provide accurate numerical representations of those properties for use in analysis codes. Task B, ALE3D Development, involves general development activities in the ALE3D code with the focus of improving simulation capabilities for problems of mutual interest to DoD and DOE. Emphasis is on problems involving multi-phase flow, blast loading of structures and system safety/vulnerability studies.

  11. 3D vision system assessment

    NASA Astrophysics Data System (ADS)

    Pezzaniti, J. Larry; Edmondson, Richard; Vaden, Justin; Hyatt, Bryan; Chenault, David B.; Kingston, David; Geulen, Vanilynmae; Newell, Scott; Pettijohn, Brad

    2009-02-01

    In this paper, we report on the development of a 3D vision system consisting of a flat panel stereoscopic display and auto-converging stereo camera and an assessment of the system's use for robotic driving, manipulation, and surveillance operations. The 3D vision system was integrated onto a Talon Robot and Operator Control Unit (OCU) such that direct comparisons of the performance of a number of test subjects using 2D and 3D vision systems were possible. A number of representative scenarios were developed to determine which tasks benefited most from the added depth perception and to understand when the 3D vision system hindered understanding of the scene. Two tests were conducted at Fort Leonard Wood, MO with noncommissioned officers ranked Staff Sergeant and Sergeant First Class. The scenarios; the test planning, approach and protocols; the data analysis; and the resulting performance assessment of the 3D vision system are reported.

  12. Evolution of the Lake Victoria basin in the context of coeval rift initiation in East Africa: a 3D numerical model approach

    NASA Astrophysics Data System (ADS)

    Wichura, Henry; Quinteros, Javier; Melnick, Daniel; Brune, Sascha; Schwanghart, Wolfgang; Strecker, Manfred R.

    2015-04-01

    Over the last four years sedimentologic and thermochronologic studies in the western and eastern branches of the Cenozoic East African Rift System (EARS) have supported the notion of a broadly contemporaneous onset of normal faulting and rift-basin formation in both segments. These studies support previous interpretations based on geophysical investigations from which an onset of rifting during the Paleogene had been postulated. In light of these studies we explore the evolution of the Lake Victoria basin, a shallow, unfaulted sedimentary basin centered between both branches of the EARS and located in the interior of the East African Plateau (EAP). We quantify the fluvial catchment evolution of the Lake Victoria basin and assess the topographic response of African crust to the onset of rifting in both branches. Furthermore, we evaluate and localize the nature of strain and flexural rift-flank uplift in both branches. We use a 3D numerical forward model that includes nonlinear temperature- and stress-dependent elasto-visco-plastic rheology. The model is able to reproduce the flexural response of variably thick lithosphere to rift-related deformation processes such as lithospheric thinning and asthenospheric upwelling. The model domain covers the entire EAP and integrates extensional processes in a heterogeneous, yet cold and thick cratonic block (Archean Tanzania craton), which is surrounded by mechanically weaker Proterozoic mobile belts, which are characterized by thinner lithosphere ("thin spots"). The lower limits of the craton (170 km) and the mobile belts (120 km) are simulated by different depths of the 1300 °C lithosphere-asthenosphere boundary. We assume a constant extension rate of 4 mm/a throughout the entire simulation of 30 Ma and neglect the effect of dynamic topography and magmatism. Even though the model setup is very simple and the resolution is not high enough to calculate realistic rift-flank uplift, it intriguingly reveals important topographic

  13. Reducing the influence of direct reflection on return signal detection in a 3D imaging lidar system by rotating the polarizing beam splitter.

    PubMed

    Wang, Chunhui; Lee, Xiaobao; Cui, Tianxiang; Qu, Yang; Li, Yunxi; Li, Hailong; Wang, Qi

    2016-03-01

    The direction rule of the laser beam traveling through a deflected polarizing beam splitter (PBS) cube is derived. It reveals that, due to the influence of end-face reflection of the PBS at the detector side, the emergent beam coming from the incident beam parallels the direction of the original case without rotation, with only a very small translation interval between them. The formula of the translation interval is also given. Meanwhile, the emergent beam from the return signal at the detector side deflects at an angle twice that of the PBS rotation angle. The correctness has been verified by an experiment. The intensity transmittance of the emergent beam when propagating in the PBS is changes very little if the rotation angle is less than 35 deg. In a 3D imaging lidar system, by rotating the PBS cube by an angle, the direction of the return signal optical axis is separated from that of the origin, which can decrease or eliminate the influence of direct reflection caused by the prism end face on target return signal detection. This has been checked by experiment.

  14. Direct extrusion process analysis with proposed numerical modeling improvements - product quality, process parameters, and microstructure prediction

    NASA Astrophysics Data System (ADS)

    de Pari, Luigi, Jr.

    2009-11-01

    A numerical modeling and simulation analysis was performed on the hot-direct extrusion process with the finite element modeling (FEM) software package, DEFORM(TM) 3-D for three case studies. The research demonstrated that a commercially available, industry-accepted numerical simulation software package can predict the material response and microstructure development with simple simulated state variables (i.e. strain, strain rate, and temperature) and easily measured initial material characteristics (e.g. grain diameter). The predicted state variables provided insight into sources for limited extrudate quality, aided in processing improvements, and were the primary variables used to predict material response. The analysis began with studying the influence of tool misalignment and the degree of billet upset on extrudate dimensional quality, measured in terms of tube eccentricity, for a copper tube case study. Under ideal upset and tool alignment conditions, the simulated eccentricity was minimized. If the mandrel had a misalignment that was within tolerance, the eccentricity initially was minor in comparison to the eccentricity produced toward the end of extrusion. Consequently, through the use of DEFORM(TM) 3-D the extrusion mechanics were understood and sources for tube eccentricity were identified. In the second case study, a flow stress model was developed as a function of the state variables for an as-cast homogenized magnesium alloy. The modeled flow stress curve reasonably agreed with experimental compression flow stress data. The model was then implemented into DEFORM(TM) 3-D to utilize the simulated state variables to examine the extrusion of an automobile structural component. It was concluded that once the initial material characteristics are accounted for in the flow stress model it will more accurately and efficiently predict the flow stress response for the actual material being considered than a generic experimental flow stress-based material library

  15. In situ and real time characterization of interface microstructure in 3D alloy solidification: benchmark microgravity experiments in the DECLIC-Directional Solidification Insert on ISS

    NASA Astrophysics Data System (ADS)

    Ramirez, A.; Chen, L.; Bergeon, N.; Billia, B.; Gu, Jiho; Trivedi, R.

    2012-01-01

    Dynamical microstructure formation and selection during solidification processing, which has a major influence on the properties in the use of elaborated materials, occur during the growth process. In situ observation of the solid-liquid interface morphology evolution is thus necessary. On earth, convection effects dominate in bulk samples and may strongly interact with microstructure dynamics and alter pattern characterization. Series of solidification experiments with 3D cylindrical sample geometry were conducted in succinonitrile (SCN) -0.24 wt%camphor (model transparent system), in microgravity environment in the Directional Solidification Insert of the DECLIC facility of CNES (French space agency) on the International Space Station (ISS). Microgravity enabled homogeneous values of control parameters over the whole interface allowing the obtaining of homogeneous patterns suitable to get quantitative benchmark data. First analyses of the characteristics of the pattern (spacing, order, etc.) and of its dynamics in microgravity will be presented.

  16. Solar Wind Halo Formation by the Scattering of the Strahl via Direct Cluster/PEACE Observations of the 3D Velocity Distribution Function

    NASA Technical Reports Server (NTRS)

    Figueroa-Vinas, Adolfo; Gurgiolo, Chris A.; Nieves-Chinchilla, Teresa; Goldstein, Melvyn L.

    2010-01-01

    It has been suggested by a number of authors that the solar wind electron halo can be formed by the scattering of the strahl. On frequent occasions we have observed in electron angular skymaps (Phi/Theta-plots) of the electron 3D velocity distribution functions) a bursty-filament of particles connecting the strahl to the solar wind core-halo. These are seen over a very limited energy range. When the magnetic field is well off the nominal solar wind flow direction such filaments are inconsistent with any local forces and are probably the result of strong scattering. Furthermore, observations indicates that the strahl component is frequently and significantly anisotropic (Tper/Tpal approx.2). This provides a possible free energy source for the excitation of whistler waves as a possible scattering mechanism. The empirical observational evidence between the halo and the strahl suggests that the strahl population may be, at least in part, the source of the halo component.

  17. Localization of Analytic Regularity Criteria on the Vorticity and Balance Between the Vorticity Magnitude and Coherence of the Vorticity Direction in the 3D NSE

    NASA Astrophysics Data System (ADS)

    Grujić, Zoran; Guberović, Rafaela

    2010-09-01

    The first part of the paper provides spatio-temporal localization of a family of analytic regularity classes for the 3D NSE obtained by Beirao Da Veiga (space-time integrability of the gradient of the velocity on {mathbb{R}^3 × (0,T)} which is out of the range of the Sobolev embedding theorem reduction to the classical Foias-Ladyzhenskaya-Prodi-Serrin space-time integrability conditions on the velocity) as well as the localization of the Beale-Kato-Majda regularity criterion (time integrability of the L ∞-norm of the vorticity). The second part introduces a family of local, scaling invariant, hybrid geometric-analytic classes in which coherence of the vorticity direction serves as a weight in the local spatio-temporal integrability of the vorticity magnitude.

  18. Europeana and 3D

    NASA Astrophysics Data System (ADS)

    Pletinckx, D.

    2011-09-01

    The current 3D hype creates a lot of interest in 3D. People go to 3D movies, but are we ready to use 3D in our homes, in our offices, in our communication? Are we ready to deliver real 3D to a general public and use interactive 3D in a meaningful way to enjoy, learn, communicate? The CARARE project is realising this for the moment in the domain of monuments and archaeology, so that real 3D of archaeological sites and European monuments will be available to the general public by 2012. There are several aspects to this endeavour. First of all is the technical aspect of flawlessly delivering 3D content over all platforms and operating systems, without installing software. We have currently a working solution in PDF, but HTML5 will probably be the future. Secondly, there is still little knowledge on how to create 3D learning objects, 3D tourist information or 3D scholarly communication. We are still in a prototype phase when it comes to integrate 3D objects in physical or virtual museums. Nevertheless, Europeana has a tremendous potential as a multi-facetted virtual museum. Finally, 3D has a large potential to act as a hub of information, linking to related 2D imagery, texts, video, sound. We describe how to create such rich, explorable 3D objects that can be used intuitively by the generic Europeana user and what metadata is needed to support the semantic linking.

  19. Direct Numerical Simulation of Pore-Scale Flow in a Bead Pack: Comparison with Magnetic Resonance Imaging Observations

    SciTech Connect

    Yang, Xiaofan; Scheibe, Timothy D.; Richmond, Marshall C.; Perkins, William A.; Vogt, Sarah J.; Codd, Sarah L.; Seymour, Joseph D.; Mckinley, Matthew I.

    2013-04-01

    A significant body of current research is aimed at developing methods for numerical simulation of flow and transport in porous media that explicitly resolve complex pore and solid geometries, and at utilizing such models to study the relationships between fundamental pore-scale processes and macroscopic manifestations at larger (i.e., Darcy) scales. A number of different numerical methods for pore-scale simulation have been developed, and have been extensively tested and validated for simplified geometries. However, validation of pore-scale simulations of fluid velocity for complex, three-dimensional (3D) pore geometries that are representative of natural porous media is challenging due to our limited ability to measure pore-scale velocity in such systems. Recent advances in magnetic resonance imaging (MRI) offer the opportunity to measure not only the pore geometry, but also local fluid velocities under steady-state flow conditions in 3D and with high spatial resolution. In this paper, we present a 3D velocity field measured at sub-pore resolution (tens of micrometers) over a centimeter-scale 3D domain using MRI methods. We have utilized the measured pore geometry to perform 3D simulations of Navier-Stokes flow over the same domain using direct numerical simulation techniques. We present a comparison of the numerical simulation results with the measured velocity field. It is shown that the numerical results match the observed velocity patterns well overall except for a variance and small systematic scaling which can be attributed to the known experimental error in the MRI measurements. The comparisons presented here provide strong validation of the pore-scale simulation methods and new insights for interpretation of uncertainty in MRI measurements of pore-scale velocity. This study also provides a potential benchmark for future comparison of other pore-scale simulation methods.

  20. The 3-D numerical study of airflow in the compressor/combustor prediffuser and dump diffuser of an industrial gas turbine

    NASA Technical Reports Server (NTRS)

    Agrawal, Ajay K.; Yang, Tah-Teh

    1993-01-01

    This paper describes the 3D computations of a flow field in the compressor/combustor diffusers of an industrial gas turbine. The geometry considered includes components such as the combustor support strut, the transition piece and the impingement sleeve with discrete cooling air holes on its surface. Because the geometry was complex and 3D, the airflow path was divided into two computational domains sharing an interface region. The body-fitted grid was generated independently in each of the two domains. The governing equations for incompressible Navier-Stokes equations were solved using the finite volume approach. The results show that the flow in the prediffuser is strongly coupled with the flow in the dump diffuser and vice versa. The computations also revealed that the flow in the dump diffuser is highly nonuniform.

  1. Linking snow microstructure to its macroscopic elastic stiffness tensor: A numerical homogenization method and its application to 3-D images from X-ray tomography

    NASA Astrophysics Data System (ADS)

    Wautier, A.; Geindreau, C.; Flin, F.

    2015-10-01

    The full 3-D macroscopic mechanical behavior of snow is investigated by solving kinematically uniform boundary condition problems derived from homogenization theories over 3-D images obtained by X-ray tomography. Snow is modeled as a porous cohesive material, and its mechanical stiffness tensor is computed within the framework of the elastic behavior of ice. The size of the optimal representative elementary volume, expressed in terms of correlation lengths, is determined through a convergence analysis of the computed effective properties. A wide range of snow densities is explored, and power laws with high regression coefficients are proposed to link the Young's and shear moduli of snow to its density. The degree of anisotropy of these properties is quantified, and Poisson's ratios are also provided. Finally, the influence of the main types of metamorphism (isothermal, temperature gradient, and wet snow metamorphism) on the elastic properties of snow and on their anisotropy is reported.

  2. Bioprinting of human pluripotent stem cells and their directed differentiation into hepatocyte-like cells for the generation of mini-livers in 3D.

    PubMed

    Faulkner-Jones, Alan; Fyfe, Catherine; Cornelissen, Dirk-Jan; Gardner, John; King, Jason; Courtney, Aidan; Shu, Wenmiao

    2015-10-21

    We report the first investigation into the bioprinting of human induced pluripotent stem cells (hiPSCs), their response to a valve-based printing process as well as their post-printing differentiation into hepatocyte-like cells (HLCs). HLCs differentiated from both hiPSCs and human embryonic stem cells (hESCs) sources were bioprinted and examined for the presence of hepatic markers to further validate the compatibility of the valve-based bioprinting process with fragile cell transfer. Examined cells were positive for nuclear factor 4 alpha and were demonstrated to secrete albumin and have morphology that was also found to be similar to that of hepatocytes. Both hESC and hiPSC lines were tested for post-printing viability and pluripotency and were found to have negligible difference in terms of viability and pluripotency between the printed and non-printed cells. hESC-derived HLCs were 3D printed using alginate hydrogel matrix and tested for viability and albumin secretion during the remaining differentiation and were found to be hepatic in nature. 3D printed with 40-layer of HLC-containing alginate structures reached peak albumin secretion at day 21 of the differentiation protocol. This work demonstrates that the valve-based printing process is gentle enough to print human pluripotent stem cells (hPSCs) (both hESCs and hiPSCs) while either maintaining their pluripotency or directing their differentiation into specific lineages. The ability to bioprint hPSCs will pave the way for producing organs or tissues on demand from patient specific cells which could be used for animal-free drug development and personalized medicine.

  3. Micromachined silicon acoustic delay line with 3D-printed micro linkers and tapered input for improved structural stability and acoustic directivity

    NASA Astrophysics Data System (ADS)

    Cho, Y.; Kumar, A.; Xu, S.; Zou, J.

    2016-10-01

    Recent studies have shown that micromachined silicon acoustic delay lines can provide a promising solution to achieve real-time photoacoustic tomography without the need for complex transducer arrays and data acquisition electronics. To achieve deeper imaging depth and wider field of view, a longer delay time and therefore delay length are required. However, as the length of the delay line increases, it becomes more vulnerable to structural instability due to reduced mechanical stiffness. In this paper, we report the design, fabrication, and testing of a new silicon acoustic delay line enhanced with 3D printed polymer micro linker structures. First, mechanical deformation of the silicon acoustic delay line (with and without linker structures) under gravity was simulated by using finite element method. Second, the acoustic crosstalk and acoustic attenuation caused by the polymer micro linker structures were evaluated with both numerical simulation and ultrasound transmission testing. The result shows that the use of the polymer micro linker structures significantly improves the structural stability of the silicon acoustic delay lines without creating additional acoustic attenuation and crosstalk. In addition, the improvement of the acoustic acceptance angle of the silicon acoustic delay lines was also investigated to better suppress the reception of unwanted ultrasound signals outside of the imaging plane. These two improvements are expected to provide an effective solution to eliminate current limitations on the achievable acoustic delay time and out-of-plane imaging resolution of micromachined silicon acoustic delay line arrays.

  4. 3d-3d correspondence revisited

    DOE PAGES

    Chung, Hee -Joong; Dimofte, Tudor; Gukov, Sergei; ...

    2016-04-21

    In fivebrane compactifications on 3-manifolds, we point out the importance of all flat connections in the proper definition of the effective 3d N = 2 theory. The Lagrangians of some theories with the desired properties can be constructed with the help of homological knot invariants that categorify colored Jones polynomials. Higgsing the full 3d theories constructed this way recovers theories found previously by Dimofte-Gaiotto-Gukov. As a result, we also consider the cutting and gluing of 3-manifolds along smooth boundaries and the role played by all flat connections in this operation.

  5. 3D Numerical Models of the Effect of Diking on the Faulting Pattern at Incipient Continental Rifts and Steady-State Spreading Centers

    NASA Astrophysics Data System (ADS)

    Tian, X.; Choi, E.; Buck, W. R.

    2015-12-01

    The offset of faults and related topographic relief varies hugely at both continental rifts and mid-ocean ridges (MORs). In some areas fault offset is measured in 10s of meters while in places marked by core complexes it is measured in 10s of kilometers. Variation in the magma supply is thought to control much of these differences. Magma supply is most usefully described by the ratio (M) between rates of lithospheric extension accommodated by magmatic dike intrusion and that occurring via faulting. 2D models with different values of M successfully explain much of the observed cross-sectional structure seen at rifts and ridges. However, magma supply varies along the axis of extension and the interactions between the tectonics and magmatism are inevitably three-dimensional. We investigate the consequences of this along-axis variation in diking in terms of faulting patterns and the associated structures using a 3D parallel geodynamic modeling code, SNAC. Many observed 3D structural features are reproduced: e.g., abyssal hill, oceanic core complex (OCC), inward fault jump, mass wasting, hourglass-shaped median valley, corrugation and mullion structure. An estimated average value of M = 0.65 is suggested as a boundary value for separating abyssal hills and OCCs formation. Previous inconsistency in the M range for OCC formation between 2D model results (M = 0.3˜0.5) and field observations (M < 0.3 or M > 0.5) is reconciled by the along-ridge coupling between different faulting regimes. We also propose asynchronous faulting-induced tensile failure as a new possibility for explaining corrugations seen on the surface of core complexes. For continental rifts, we will describe a suite of 2D and 3D model calculations with a range of initial lithospheric structures and values of M. In one set of the 2D models we limit the extensional tectonic force and show how this affects the maximum topographic relief produced across the rift. We are also interested in comparing models in

  6. Direct Numerical Simulation of a Shocked Helium Jet

    SciTech Connect

    Cloutman, L D

    2002-02-01

    We present direct numerical simulations of a shock tube experiment in which a cylindrical laminar jet of helium doped with biacetyl is injected into air and subjected to a weak shock wave. Computed species distributions in a planar cross section of the jet are compared to planar laser-induced fluorescence (PLIF) images produced by the experiment. The calculations are in excellent agreement with the experimental images. We find that differential diffusion of species is an important feature of this experiment.

  7. Direct numerical simulation of compressible free shear flows

    NASA Technical Reports Server (NTRS)

    Lele, Sanjiva K.

    1989-01-01

    Direct numerical simulations of compressible free shear layers in open domains are conducted. Compact finite-difference schemes of spectral-like accuracy are used for the simulations. Both temporally-growing and spatially-growing mixing layers are studied. The effect of intrinsic compressibility on the evolution of vortices is studied. The use of convective Mach number is validated. Details of vortex roll up and pairing are studied. Acoustic radiation from vortex roll up, pairing and shape oscillations is studied and quantified.

  8. 3D numerical modelling of the steady-state thermal regime constrained by surface heat flow data: a Monte Carlo approach

    NASA Astrophysics Data System (ADS)

    Mather, B.; Moresi, L. N.; Cruden, A. R.

    2014-12-01

    Uncertainty of the lithospheric thermal regime greatly increases with depth. Measurements of temperature gradient and crustal rheology are concentrated in the upper crust, whereas the majority of the lithospheric measurements are approximated using empirical depth-dependent functions. We have applied a Monte Carlo approach to test the variation of crustal heat flow with temperature-dependent conductivity and the redistribution of heat-producing elements. The dense population of precision heat flow data in Victoria, Southeast Australia offers the ideal environment to test the variation of heat flow. A stochastically consistent anomalous zone of impossibly high Moho temperatures in the 3D model (> 900°C) correlates well with a zone of low teleseismic velocity and high electrical conductivity. This indicates that transient heat transfer has perturbed the thermal gradient and therefore a steady-state approach to 3D modelling is inappropriate in this zone. A spatial correlation between recent intraplate volcanic eruption points (< 5 Ma) and elevated Moho temperatures is a potential origin for additional latent heat in the crust.

  9. On the interaction between shear dusty currents and buildings in vertical collapse: Theoretical aspects, experimental observations, and 3D numerical simulation

    NASA Astrophysics Data System (ADS)

    Doronzo, Domenico M.; de Tullio, Marco D.; Pascazio, Giuseppe; Dellino, Pierfrancesco; Liu, Guilin

    2015-09-01

    We investigate the behavior of vertical building collapses that, at impact on the ground, can generate shear dusty currents. These currents macroscopically resemble natural currents like dust storms and pyroclastic density currents, which may heavily interact with the surroundings while propagating. In particular, shear dusty currents are generated because of building collapse after pulverization, whereas pyroclastic density currents can be generated because of eruptive column or volcano collapse after fragmentation. Pyroclastic density currents can move for kilometers, and then load the surroundings by flow dynamic pressure; a similar dynamical behavior occurs in shear dusty currents that load buildings. We employed 3D engineering fluid dynamics to simulate the generation (by vertical collapse), and the propagation and building interaction of shear dusty currents. We used an Eulerian-Lagrangian multiphase approach to model the gas-particle flow, and an immersed boundary technique to mesh the domain, in order to account for sedimentary processes and complex 3D urban geometry in the computation. Results show that the local dynamic pressure of the shear current is amplified up to a factor ~ 10 because of flow-building interaction. Also, the surroundings consisting of multiple buildings and empty spaces make walls and streets as surfaces of particle accumulation, which from the collapse zone on can get thinner by exponential law. These results can help better assessing the intricate interaction between pyroclastic density currents and urban surroundings, as well as better link fragmentation, collapse and density current to each other.

  10. 3D and Education

    NASA Astrophysics Data System (ADS)

    Meulien Ohlmann, Odile

    2013-02-01

    Today the industry offers a chain of 3D products. Learning to "read" and to "create in 3D" becomes an issue of education of primary importance. 25 years professional experience in France, the United States and Germany, Odile Meulien set up a personal method of initiation to 3D creation that entails the spatial/temporal experience of the holographic visual. She will present some different tools and techniques used for this learning, their advantages and disadvantages, programs and issues of educational policies, constraints and expectations related to the development of new techniques for 3D imaging. Although the creation of display holograms is very much reduced compared to the creation of the 90ies, the holographic concept is spreading in all scientific, social, and artistic activities of our present time. She will also raise many questions: What means 3D? Is it communication? Is it perception? How the seeing and none seeing is interferes? What else has to be taken in consideration to communicate in 3D? How to handle the non visible relations of moving objects with subjects? Does this transform our model of exchange with others? What kind of interaction this has with our everyday life? Then come more practical questions: How to learn creating 3D visualization, to learn 3D grammar, 3D language, 3D thinking? What for? At what level? In which matter? for whom?

  11. Direct numerical simulation of solid-liquid flow of Newtonian and viscoelastic fluids

    NASA Astrophysics Data System (ADS)

    Zhu, Mingyu

    The main theme of this work is to enhance the understanding on the behavior of solid particles in flows of Newtonian or viscoelastic fluids by using both two-dimensional and three-dimensional direct numerical simulations (DNS). A large-scale state-of-the-art software package PARTMOVER3D is developed based on an Arbitrary Lagrangian-Eulerian (ALE) technique and an Elastic-Viscous-Stress-Split (EVSS) scheme. Our numerical results are extensively compared with analytical, experimental and numerical ones in the literature. We studied the motion of spheres sedimenting in a cylindrical tube filled with a Newtonian fluid. The hydrodynamic drag and lift on the particle are investigated under various conditions. The effects of the tube wall, in terms of the blockage ratio and