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Sample records for 3d optical lattices

  1. Ultracold polar molecules in a 3D optical lattice

    NASA Astrophysics Data System (ADS)

    Yan, Bo

    2015-05-01

    Ultracold polar molecules, with their long-range electric dipolar interactions, offer new opportunities for studying quantum magnetism and many-body physics. KRb molecules loaded into a three-dimensional (3D) optical lattice allow one to study such a spin-lattice system in a stable environment without losses arising from chemical reactions. In the case with strong lattice confinement along two directions and a weak lattice potential along the third, we find the loss rate is suppressed by the quantum Zeno effect. In a deep 3D lattice with no tunneling, we observe evidences for spin exchange interactions. We use Ramsey spectroscopy to investigate the spin dynamics. By choosing the appropriate lattice polarizations and implementing a spin echo sequence, the single particle dephasing is largely suppressed, leaving the dipolar exchange interactions as the dominant contribution to the observed dynamics. This is supported by many-body theoretical calculations. While this initial demonstration was done with low lattice fillings, our current experimental efforts are focused on increasing the lattice filling fraction. This will greatly benefit the study of complex many-body dynamics with long-range interactions, such as transport of excitations in an out-of-equilibrium system and spin-orbit coupling in a lattice.

  2. Quantum Degenerate Strontium in a 3D Optical Lattice

    NASA Astrophysics Data System (ADS)

    Aman, J. A.; Desalvo, B. J.; Killian, T. C.

    2014-05-01

    We present our experiments with quantum degenerate neutral strontium in a 3-D optical lattice formed with 532 nm light. Precision control and manipulation of quantum degenerate gases in optical lattices allows for the realization and investigation of tunable many-body systems. Strontium, in particular, has been studied extensively in optical lattices due to the narrow 5s21S0 --> 5 s 5 p3Pj transitions for use as an atomic clock. However, in the present work, we take advantage of these narrow transitions together with strontium's unique isotopic properties to investigate interaction regimes inaccessible to alkali atoms. Among the topics we plan to explore are formation of ultracold molecules using an optical Feshbach resonance as well as the effects of dissipation on atom dynamics. This work was supported by Rice University, Shell, the Welch Foundation (C-1579) and the National Science Foundation (PHY-1205946).

  3. Controllable 3D atomic Brownian motor in optical lattices

    NASA Astrophysics Data System (ADS)

    Dion, C. M.; Sjölund, P.; Petra, S. J. H.; Jonsell, S.; Nylén, M.; Sanchez-Palencia, L.; Kastberg, A.

    2008-06-01

    We study a Brownian motor, based on cold atoms in optical lattices, where atomic motion can be induced in a controlled manner in an arbitrary direction, by rectification of isotropic random fluctuations. In contrast with ratchet mechanisms, our Brownian motor operates in a potential that is spatially and temporally symmetric, in apparent contradiction to the Curie principle. Simulations, based on the Fokker-Planck equation, allow us to gain knowledge on the qualitative behaviour of our Brownian motor. Studies of Brownian motors, and in particular ones with unique control properties, are of fundamental interest because of the role they play in protein motors and their potential applications in nanotechnology. In particular, our system opens the way to the study of quantum Brownian motors.

  4. Coherent Addressing of Individual Neutral Atoms in a 3D Optical Lattice.

    PubMed

    Wang, Yang; Zhang, Xianli; Corcovilos, Theodore A; Kumar, Aishwarya; Weiss, David S

    2015-07-24

    We demonstrate arbitrary coherent addressing of individual neutral atoms in a 5×5×5 array formed by an optical lattice. Addressing is accomplished using rapidly reconfigurable crossed laser beams to selectively ac Stark shift target atoms, so that only target atoms are resonant with state-changing microwaves. The effect of these targeted single qubit gates on the quantum information stored in nontargeted atoms is smaller than 3×10^{-3} in state fidelity. This is an important step along the path of converting the scalability promise of neutral atoms into reality.

  5. Metallic and Insulating Phases of Interacting Fermions in a 3D Optical Lattice

    NASA Astrophysics Data System (ADS)

    Hackermueller, Lucia

    2010-03-01

    Ultracold fermions in optical lattices are a promising tool to simulate solid state physics, since they represent an ideal and highly tunable implementation of the Hubbard Hamiltonian. A proof of principle is to demonstrate a Mott insulating state, where repulsive interactions between the atoms lead to an insulating behavior in a half-filled conduction band. In our experiments we study repulsively and attractively interacting ^40K atoms within the combination of a red-detuned dipole trap and a blue detuned lattice. This setup allows us to gradually transform the system from metallic to Mott-insulating and band insulating states. We measure the phase of the system by analyzing the system size and the number of doubly occupied sites and compare our findings to DMFT theory. In addition we investigate the dynamical behavior of interacting fermionic mixtures. We prepare a band insulating system and suddenly release it into a homogenous lattice. We detect a symmetric behavior from a ballistic expansion for non-interacting clouds to a strongly suppressed expansion due to the formation of attractively or repulsively bound pairs. This experiment allows us to study transport properties of the Hubbard model. This work was done together with U.Schneider, S. Will, Th. Best, S. Braun, I. Bloch and with theoretical support from T.A. Costi, R.W. Helmes, D. Rasch, A.Rosch, B. Paredes, M. Moreno-Cardoner, T. Kitagawa, E.Demler.

  6. Single qubit gates on neutral atoms in a 3d Optical lattice

    NASA Astrophysics Data System (ADS)

    Kumar, Aishwarya; Wang, Yang; Zhang, Xianli; Corcovilos, Theodore A.; Weiss, David S.

    2015-05-01

    Neutral atoms are especially promising candidates for quantum computing because of their inherent scalability. To realize this scalability requires being able to manipulate the quantum information at target qubits with high fidelity and low crosstalk. We will present two single qubit gate addressing protocols. We have experimentally applied them both to targeted sites in a 5 × 5 × 5 3D array. The two distinct approaches both use crossed MEMS-mirror directed addressing beams along with microwave pulses to target atoms at single sites, while having minimal impact on the quantum information at non-target sites. Supported by DARPA, QUEST and ARO.

  7. Efficient Second Harmonic Generation in 3D Nonlinear Optical-Lattice-Like Cladding Waveguide Splitters by Femtosecond Laser Inscription

    PubMed Central

    Nie, Weijie; Jia, Yuechen; Vázquez de Aldana, Javier R.; Chen, Feng

    2016-01-01

    Integrated photonic devices with beam splitting function are intriguing for a broad range of photonic applications. Through optical-lattice-like cladding waveguide structures fabricated by direct femtosecond laser writing, the light propagation can be engineered via the track-confined refractive index profiles, achieving tailored output beam distributions. In this work, we report on the fabrication of 3D laser-written optical-lattice-like structures in a nonlinear KTP crystal to implement 1 × 4 beam splitting. Second harmonic generation (SHG) of green light through these nonlinear waveguide beam splitter structures provides the capability for the compact visible laser emitting devices. With Type II phase matching of the fundamental wavelength (@ 1064 nm) to second harmonic waves (@ 532 nm), the frequency doubling has been achieved through this three-dimensional beam splitter. Under 1064-nm continuous-wave fundamental-wavelength pump beam, guided-wave SHG at 532 nm are measured with the maximum power of 0.65 mW and 0.48 mW for waveguide splitters (0.67 mW and 0.51 mW for corresponding straight channel waveguides), corresponding to a SH conversion efficiency of approximately ~14.3%/W and 13.9%/W (11.2%/W, 11.3%/W for corresponding straight channel waveguides), respectively. This work paves a way to fabricate compact integrated nonlinear photonic devices in a single chip with beam dividing functions. PMID:26924255

  8. Efficient Second Harmonic Generation in 3D Nonlinear Optical-Lattice-Like Cladding Waveguide Splitters by Femtosecond Laser Inscription.

    PubMed

    Nie, Weijie; Jia, Yuechen; Vázquez de Aldana, Javier R; Chen, Feng

    2016-02-29

    Integrated photonic devices with beam splitting function are intriguing for a broad range of photonic applications. Through optical-lattice-like cladding waveguide structures fabricated by direct femtosecond laser writing, the light propagation can be engineered via the track-confined refractive index profiles, achieving tailored output beam distributions. In this work, we report on the fabrication of 3D laser-written optical-lattice-like structures in a nonlinear KTP crystal to implement 1 × 4 beam splitting. Second harmonic generation (SHG) of green light through these nonlinear waveguide beam splitter structures provides the capability for the compact visible laser emitting devices. With Type II phase matching of the fundamental wavelength (@ 1064 nm) to second harmonic waves (@ 532 nm), the frequency doubling has been achieved through this three-dimensional beam splitter. Under 1064-nm continuous-wave fundamental-wavelength pump beam, guided-wave SHG at 532 nm are measured with the maximum power of 0.65 mW and 0.48 mW for waveguide splitters (0.67 mW and 0.51 mW for corresponding straight channel waveguides), corresponding to a SH conversion efficiency of approximately ~14.3%/W and 13.9%/W (11.2%/W, 11.3%/W for corresponding straight channel waveguides), respectively. This work paves a way to fabricate compact integrated nonlinear photonic devices in a single chip with beam dividing functions.

  9. Efficient Second Harmonic Generation in 3D Nonlinear Optical-Lattice-Like Cladding Waveguide Splitters by Femtosecond Laser Inscription.

    PubMed

    Nie, Weijie; Jia, Yuechen; Vázquez de Aldana, Javier R; Chen, Feng

    2016-01-01

    Integrated photonic devices with beam splitting function are intriguing for a broad range of photonic applications. Through optical-lattice-like cladding waveguide structures fabricated by direct femtosecond laser writing, the light propagation can be engineered via the track-confined refractive index profiles, achieving tailored output beam distributions. In this work, we report on the fabrication of 3D laser-written optical-lattice-like structures in a nonlinear KTP crystal to implement 1 × 4 beam splitting. Second harmonic generation (SHG) of green light through these nonlinear waveguide beam splitter structures provides the capability for the compact visible laser emitting devices. With Type II phase matching of the fundamental wavelength (@ 1064 nm) to second harmonic waves (@ 532 nm), the frequency doubling has been achieved through this three-dimensional beam splitter. Under 1064-nm continuous-wave fundamental-wavelength pump beam, guided-wave SHG at 532 nm are measured with the maximum power of 0.65 mW and 0.48 mW for waveguide splitters (0.67 mW and 0.51 mW for corresponding straight channel waveguides), corresponding to a SH conversion efficiency of approximately ~14.3%/W and 13.9%/W (11.2%/W, 11.3%/W for corresponding straight channel waveguides), respectively. This work paves a way to fabricate compact integrated nonlinear photonic devices in a single chip with beam dividing functions. PMID:26924255

  10. Nano-spatial parameters from 3D to 2D lattice dimensionality by organic variant in [ZnCl4]- [R]+ hybrid materials: Structure, architecture-lattice dimensionality, microscopy, optical Eg and PL correlations

    NASA Astrophysics Data System (ADS)

    Kumar, Ajit; Verma, Sanjay K.; Alvi, P. A.; Jasrotia, Dinesh

    2016-04-01

    The nanospatial morphological features of [ZnCl]- [C5H4NCH3]+ hybrid derivative depicts 28 nm granular size and 3D spreader shape packing pattern as analyzed by FESEM and single crystal XRD structural studies. The organic moiety connect the inorganic components through N-H+…Cl- hydrogen bond to form a hybrid composite, the replacement of organic derivatives from 2-methylpyridine to 2-Amino-5-choloropyridine results the increase in granular size from 28nm to 60nm and unit cell packing pattern from 3D-2D lattice dimensionality along ac plane. The change in optical energy direct band gap value from 3.01eV for [ZnCl]- [C5H4NCH3]+ (HM1) to 3.42eV for [ZnCl]- [C5H5ClN2]+ (HM2) indicates the role of organic moiety in optical properties of hybrid materials. The photoluminescence emission spectra is observed in the wavelength range of 370 to 600 nm with maximum peak intensity of 9.66a.u. at 438 nm for (HM1) and 370 to 600 nm with max peak intensity of 9.91 a.u. at 442 nm for (HM2), indicating that the emission spectra lies in visible range. PL excitation spectra depicts the maximum excitation intensity [9.8] at 245.5 nm for (HM1) and its value of 9.9 a.u. at 294 nm, specify the excitation spectra lies in UV range. Photoluminescence excitation spectra is observed in the wavelength range of 280 to 350 nm with maximum peak intensity of 9.4 a.u. at 285.5 nm and 9.9 a.u. at 294 and 297 nm, indicating excitation in the UV spectrum. Single crystal growth process and detailed physiochemical characterization such as XRD, FESEM image analysis photoluminescence property reveals the structure stability with non-covalent interactions, lattice dimensionality (3D-2D) correlations interweaving into the design of inorganic-organic hybrid materials.

  11. Lattice Boltzmann Method for 3-D Flows with Curved Boundary

    NASA Technical Reports Server (NTRS)

    Mei, Renwei; Shyy, Wei; Yu, Dazhi; Luo, Li-Shi

    2002-01-01

    In this work, we investigate two issues that are important to computational efficiency and reliability in fluid dynamics applications of the lattice, Boltzmann equation (LBE): (1) Computational stability and accuracy of different lattice Boltzmann models and (2) the treatment of the boundary conditions on curved solid boundaries and their 3-D implementations. Three athermal 3-D LBE models (D3QI5, D3Ql9, and D3Q27) are studied and compared in terms of efficiency, accuracy, and robustness. The boundary treatment recently developed by Filippova and Hanel and Met et al. in 2-D is extended to and implemented for 3-D. The convergence, stability, and computational efficiency of the 3-D LBE models with the boundary treatment for curved boundaries were tested in simulations of four 3-D flows: (1) Fully developed flows in a square duct, (2) flow in a 3-D lid-driven cavity, (3) fully developed flows in a circular pipe, and (4) a uniform flow over a sphere. We found that while the fifteen-velocity 3-D (D3Ql5) model is more prone to numerical instability and the D3Q27 is more computationally intensive, the 63Q19 model provides a balance between computational reliability and efficiency. Through numerical simulations, we demonstrated that the boundary treatment for 3-D arbitrary curved geometry has second-order accuracy and possesses satisfactory stability characteristics.

  12. FIT3D: Fitting optical spectra

    NASA Astrophysics Data System (ADS)

    Sánchez, S. F.; Pérez, E.; Sánchez-Blázquez, P.; González, J. J.; Rosales-Ortega, F. F.; Cano-Díaz, M.; López-Cobá, C.; Marino, R. A.; Gil de Paz, A.; Mollá, M.; López-Sánchez, A. R.; Ascasibar, Y.; Barrera-Ballesteros, J.

    2016-09-01

    FIT3D fits optical spectra to deblend the underlying stellar population and the ionized gas, and extract physical information from each component. FIT3D is focused on the analysis of Integral Field Spectroscopy data, but is not restricted to it, and is the basis of Pipe3D, a pipeline used in the analysis of datasets like CALIFA, MaNGA, and SAMI. It can run iteratively or in an automatic way to derive the parameters of a large set of spectra.

  13. 3D optical measuring technologies and systems

    NASA Astrophysics Data System (ADS)

    Chugui, Yuri V.

    2005-02-01

    The results of the R & D activity of TDI SIE SB RAS in the field of the 3D optical measuring technologies and systems for noncontact 3D optical dimensional inspection applied to atomic and railway industry safety problems are presented. This activity includes investigations of diffraction phenomena on some 3D objects, using the original constructive calculation method. The efficient algorithms for precise determining the transverse and longitudinal sizes of 3D objects of constant thickness by diffraction method, peculiarities on formation of the shadow and images of the typical elements of the extended objects were suggested. Ensuring the safety of nuclear reactors and running trains as well as their high exploitation reliability requires a 100% noncontact precise inspection of geometrical parameters of their components. To solve this problem we have developed methods and produced the technical vision measuring systems LMM, CONTROL, PROFIL, and technologies for noncontact 3D dimensional inspection of grid spacers and fuel elements for the nuclear reactor VVER-1000 and VVER-440, as well as automatic laser diagnostic COMPLEX for noncontact inspection of geometric parameters of running freight car wheel pairs. The performances of these systems and the results of industrial testing are presented and discussed. The created devices are in pilot operation at Atomic and Railway Companies.

  14. Lattice percolation approach to 3D modeling of tissue aging

    NASA Astrophysics Data System (ADS)

    Gorshkov, Vyacheslav; Privman, Vladimir; Libert, Sergiy

    2016-11-01

    We describe a 3D percolation-type approach to modeling of the processes of aging and certain other properties of tissues analyzed as systems consisting of interacting cells. Lattice sites are designated as regular (healthy) cells, senescent cells, or vacancies left by dead (apoptotic) cells. The system is then studied dynamically with the ongoing processes including regular cell dividing to fill vacant sites, healthy cells becoming senescent or dying, and senescent cells dying. Statistical-mechanics description can provide patterns of time dependence and snapshots of morphological system properties. The developed theoretical modeling approach is found not only to corroborate recent experimental findings that inhibition of senescence can lead to extended lifespan, but also to confirm that, unlike 2D, in 3D senescent cells can contribute to tissue's connectivity/mechanical stability. The latter effect occurs by senescent cells forming the second infinite cluster in the regime when the regular (healthy) cell's infinite cluster still exists.

  15. Engineering novel optical lattices.

    PubMed

    Windpassinger, Patrick; Sengstock, Klaus

    2013-08-01

    Optical lattices have developed into a widely used and highly recognized tool to study many-body quantum physics with special relevance for solid state type systems. One of the most prominent reasons for this success is the high degree of tunability in the experimental setups. While at the beginning quasi-static, cubic geometries were mainly explored, the focus of the field has now shifted toward new lattice topologies and the dynamical control of lattice structures. In this review we intend to give an overview of the progress recently achieved in this field on the experimental side. In addition, we discuss theoretical proposals exploiting specifically these novel lattice geometries. PMID:23828639

  16. Diffractive optical element for creating visual 3D images.

    PubMed

    Goncharsky, Alexander; Goncharsky, Anton; Durlevich, Svyatoslav

    2016-05-01

    A method is proposed to compute and synthesize the microrelief of a diffractive optical element to produce a new visual security feature - the vertical 3D/3D switch effect. The security feature consists in the alternation of two 3D color images when the diffractive element is tilted up/down. Optical security elements that produce the new security feature are synthesized using electron-beam technology. Sample optical security elements are manufactured that produce 3D to 3D visual switch effect when illuminated by white light. Photos and video records of the vertical 3D/3D switch effect of real optical elements are presented. The optical elements developed can be replicated using standard equipment employed for manufacturing security holograms. The new optical security feature is easy to control visually, safely protected against counterfeit, and designed to protect banknotes, documents, ID cards, etc. PMID:27137530

  17. Multiple-Relaxation-Time Lattice Boltzmann Models in 3D

    NASA Technical Reports Server (NTRS)

    dHumieres, Dominique; Ginzburg, Irina; Krafczyk, Manfred; Lallemand, Pierre; Luo, Li-Shi; Bushnell, Dennis M. (Technical Monitor)

    2002-01-01

    This article provides a concise exposition of the multiple-relaxation-time lattice Boltzmann equation, with examples of fifteen-velocity and nineteen-velocity models in three dimensions. Simulation of a diagonally lid-driven cavity flow in three dimensions at Re=500 and 2000 is performed. The results clearly demonstrate the superior numerical stability of the multiple-relaxation-time lattice Boltzmann equation over the popular lattice Bhatnagar-Gross-Krook equation.

  18. Manufacturing: 3D printed micro-optics

    NASA Astrophysics Data System (ADS)

    Juodkazis, Saulius

    2016-08-01

    Uncompromised performance of micro-optical compound lenses has been achieved by high-fidelity shape definition during two-photon absorption microfabrication. The lenses have been made directly onto image sensors and even onto the tip of an optic fibre.

  19. Fibonacci Optical Lattices

    NASA Astrophysics Data System (ADS)

    Singh, Kevin; Geiger, Zachary; Senaratne, Ruwan; Rajagopal, Shankari; Fujiwara, Kurt; Weld, David; Weld Group Team

    2015-05-01

    Quasiperiodicity is intimately involved in quantum phenomena from localization to the quantum Hall effect. Recent experimental investigation of quasiperiodic quantum effects in photonic and electronic systems have revealed intriguing connections to topological phenomena. However, such experiments have been limited by the absence of techniques for creating tunable quasiperiodic structures. We propose a new type of quasiperiodic optical lattice, constructed by intersecting a Gaussian beam with a 2D square lattice at an angle with an irrational tangent. The resulting potential, a generalization of the Fibonacci lattice, is a physical realization of the mathematical ``cut-and-project'' construction which underlies all quasiperiodic structures. Calculation of the energies and wavefunctions of atoms loaded into the proposed quasiperiodic lattice demonstrate a fractal energy spectrum and the existence of edge states. We acknowledge support from the ONR (award N00014-14-1-0805), the ARO and the PECASE program (award W911NF-14-1-0154), the AFOSR (award FA9550-12-1-0305), and the Alfred P. Sloan foundation (grant BR2013-110).

  20. Magnetic and Lattice Interaction in 3d Transition Metal Compounds

    NASA Astrophysics Data System (ADS)

    Jassim, Ishmaeel Khalil

    Available from UMI in association with The British Library. The importance and nature of magnetic and lattice degrees of freedom and their interaction in transition metal magnets has been investigated. As an example of localised behaviour, Heusler alloys in which the magnetic moment was confined to Mn atoms were chosen, e.g. Pd_2MnIn. The manganese atoms are separated by more than 4.6A. By systematically changing Pd for either Ag or Au the electron concentration can be varied in a continuous manner. Dependent upon the electron concentration several different antiferromagnetic structures consistent with an fcc lattice are observed at low temperatures. The type of magnetic order gives rise to distinct lattice distortion characteristic of the magnetic symmetry. A wide range of bulk measurements was carried out to characterise the materials, e.g. X-ray, neutron diffraction, magnetic susceptibility and specific heat (using both pulse and continuous heating techniques). The magnetic structures were, in some instances, frustrated as may be expected for antiferromagnetism on an fcc lattice. As an example of itinerant behaviour the Fe-Ni system was chosen. rm Fe_{1 -x}Ni_ x alloy systems have long been of considerable interest since rm Fe_ {65}Ni_{35} shows an anomalously small thermal expansion below T_ {rm c}. Numerous experiments have been carried out to understand this phenomenon, the Invar effect. The effect is most pronounced close to the composition defining the phase boundary between the bcc and fcc structures. The interplay between the magnetic and lattice degrees of freedom were investigated on an atomic scale using inelastic polarised neutron scattering. The polarisation dependence of the magneto vibrational scattering of the one phonon cross-sections has been investigated as a continuous function of q throughout the Brillouin zone in the Invar alloy rm Fe_{65 }Ni_{35}, and in two other FeNi samples out side the Invar region. The magneto vibrational scattering is

  1. Deconvolution in 3-D optical microscopy.

    PubMed

    Shaw, P

    1994-09-01

    Fluorescent probes are becoming ever more widely used in the study of subcellular structure, and determination of their three-dimensional distributions has become very important. Confocal microscopy is now a common technique for overcoming the problem of out-of-focus flare in fluorescence imaging, but an alternative method uses digital image processing of conventional fluorescence images--a technique often termed 'deconvolution' or 'restoration'. This review attempts to explain image deconvolution in a non-technical manner. It is also applicable to 3-D confocal images, and can provide a further significant improvement in clarity and interpretability of such images. Some examples of the application of image deconvolution to both conventional and confocal fluorescence images are shown.

  2. 3D-additive manufactured optical mount

    NASA Astrophysics Data System (ADS)

    Mammini, Paul V.; Ciscel, David; Wooten, John

    2015-09-01

    The Area Defense Anti-Munitions (ADAM) is a low cost and effective high power laser weapon system. It's designed to address and negate important threats such as short-range rockets, UAVs, and small boats. Many critical optical components operate in the system. The optics and mounts must accommodate thermal and mechanical stresses, plus maintain an exceptional wave front during operation. Lockheed Martin Space Systems Company (LMSSC) developed, designed, and currently operates ADAM. This paper covers the design and development of a key monolithic, flexured, titanium mirror mount that was manufactured by CalRAM using additive processes.

  3. Tailored complex 3D vortex lattice structures by perturbed multiples of three-plane waves.

    PubMed

    Xavier, Jolly; Vyas, Sunil; Senthilkumaran, Paramasivam; Joseph, Joby

    2012-04-20

    As three-plane waves are the minimum number required for the formation of vortex-embedded lattice structures by plane wave interference, we present our experimental investigation on the formation of complex 3D photonic vortex lattice structures by a designed superposition of multiples of phase-engineered three-plane waves. The unfolding of the generated complex photonic lattice structures with higher order helical phase is realized by perturbing the superposition of a relatively phase-encoded, axially equidistant multiple of three noncoplanar plane waves. Through a programmable spatial light modulator assisted single step fabrication approach, the unfolded 3D vortex lattice structures are experimentally realized, well matched to our computer simulations. The formation of higher order intertwined helices embedded in these 3D spiraling vortex lattice structures by the superposition of the multiples of phase-engineered three-plane waves interference is also studied.

  4. 3D printed long period gratings for optical fibers.

    PubMed

    Iezzi, Victor Lambin; Boisvert, Jean-Sébastien; Loranger, Sébastien; Kashyap, Raman

    2016-04-15

    We demonstrate a simple technique for implementing long period grating (LPG) structures by the use of a 3D printer. This Letter shows a way of manipulating the mode coupling within an optical fiber by applying stress through an external 3D printed periodic structure. Different LPG lengths and periods have been studied, as well as the effect of the applied stress on the coupling efficiency from the fundamental mode to cladding modes. The technique is very simple, highly flexible, affordable, and easy to implement without the need of altering the optical fiber. This Letter is part of a growing line of interest in the use of 3D printers for optical applications.

  5. Optical characterization and measurements of autostereoscopic 3D displays

    NASA Astrophysics Data System (ADS)

    Salmimaa, Marja; Järvenpää, Toni

    2008-04-01

    3D or autostereoscopic display technologies offer attractive solutions for enriching the multimedia experience. However, both characterization and comparison of 3D displays have been challenging when the definitions for the consistent measurement methods have been lacking and displays with similar specifications may appear quite different. Earlier we have investigated how the optical properties of autostereoscopic (3D) displays can be objectively measured and what are the main characteristics defining the perceived image quality. In this paper the discussion is extended to cover the viewing freedom (VF) and the definition for the optimum viewing distance (OVD) is elaborated. VF is the volume inside which the eyes have to be to see an acceptable 3D image. Characteristics limiting the VF space are proposed to be 3D crosstalk, luminance difference and color difference. Since the 3D crosstalk can be presumed to be dominating the quality of the end user experience and in our approach is forming the basis for the calculations of the other optical parameters, the reliability of the 3D crosstalk measurements is investigated. Furthermore the effect on the derived VF definition is evaluated. We have performed comparison 3D crosstalk measurements with different measurement device apertures and the effect of different measurement geometry on the results on actual 3D displays is reported.

  6. A lattice-Boltzmann scheme of the Navier-Stokes equations on a 3D cuboid lattice

    NASA Astrophysics Data System (ADS)

    Min, Haoda; Peng, Cheng; Wang, Lian-Ping

    2015-11-01

    The standard lattice-Boltzmann method (LBM) for fluid flow simulation is based on a square (in 2D) or cubic (in 3D) lattice grids. Recently, two new lattice Boltzmann schemes have been developed on a 2D rectangular grid using the MRT (multiple-relaxation-time) collision model, by adding a free parameter in the definition of moments or by extending the equilibrium moments. Here we developed a lattice Boltzmann model on 3D cuboid lattice, namely, a lattice grid with different grid lengths in different spatial directions. We designed our MRT-LBM model by matching the moment equations from the Chapman-Enskog expansion with the Navier-Stokes equations. The model guarantees correct hydrodynamics. A second-order term is added to the equilibrium moments in order to restore the isotropy of viscosity on a cuboid lattice. The form and the coefficients of the extended equilibrium moments are determined through an inverse design process. An additional benefit of the model is that the viscosity can be adjusted independent of the stress-moment relaxation parameter, thus improving the numerical stability of the model. The resulting cuboid MRT-LBM model is then validated through benchmark simulations using laminar channel flow, turbulent channel flow, and the 3D Taylor-Green vortex flow.

  7. Flexydos3D: A new deformable anthropomorphic 3D dosimeter readout with optical CT scanning

    NASA Astrophysics Data System (ADS)

    De Deene, Yves; Hill, Robin; Skyt, Peter S.; Booth, Jeremy

    2015-01-01

    A new deformable polydimethylsiloxane (PDMS) based dosimeter is proposed that can be cast in an anthropomorphic shape and that can be used for 3D radiation dosimetry of deformable targets. The new material has additional favorable characteristics as it is tissue equivalent for high-energy photons, easy to make and is non-toxic. In combination with dual wavelength optical scanning, it is a powerful dosimeter for dose verification of image gated or organ tracked radiotherapy with moving and deforming targets.

  8. Optical-CT imaging of complex 3D dose distributions

    NASA Astrophysics Data System (ADS)

    Oldham, Mark; Kim, Leonard; Hugo, Geoffrey

    2005-04-01

    The limitations of conventional dosimeters restrict the comprehensiveness of verification that can be performed for advanced radiation treatments presenting an immediate and substantial problem for clinics attempting to implement these techniques. In essence, the rapid advances in the technology of radiation delivery have not been paralleled by corresponding advances in the ability to verify these treatments. Optical-CT gel-dosimetry is a relatively new technique with potential to address this imbalance by providing high resolution 3D dose maps in polymer and radiochromic gel dosimeters. We have constructed a 1st generation optical-CT scanner capable of high resolution 3D dosimetry and applied it to a number of simple and increasingly complex dose distributions including intensity-modulated-radiation-therapy (IMRT). Prior to application to IMRT, the robustness of optical-CT gel dosimetry was investigated on geometry and variable attenuation phantoms. Physical techniques and image processing methods were developed to minimize deleterious effects of refraction, reflection, and scattered laser light. Here we present results of investigations into achieving accurate high-resolution 3D dosimetry with optical-CT, and show clinical examples of 3D IMRT dosimetry verification. In conclusion, optical-CT gel dosimetry can provide high resolution 3D dose maps that greatly facilitate comprehensive verification of complex 3D radiation treatments. Good agreement was observed at high dose levels (>50%) between planned and measured dose distributions. Some systematic discrepancies were observed however (rms discrepancy 3% at high dose levels) indicating further work is required to eliminate confounding factors presently compromising the accuracy of optical-CT 3D gel-dosimetry.

  9. Twisted 3D N=4 supersymmetric YM on deformed A{sub 3}{sup *} lattice

    SciTech Connect

    Saidi, El Hassan

    2014-01-15

    We study a class of twisted 3D N=4 supersymmetric Yang-Mills (SYM) theory on particular 3-dimensional lattice L{sub 3D} formally denoted as L{sub 3D}{sup su{sub 3}×u{sub 1}} and given by non-trivial fibration L{sub 1D}{sup u{sub 1}}×L{sub 2D}{sup su{sub 3}} with base L{sub 2D}{sup su{sub 3}}=A{sub 2}{sup *}, the weight lattice of SU(3). We first, develop the twisted 3D N=4 SYM in continuum by using superspace method where the scalar supercharge Q is manifestly exhibited. Then, we show how to engineer the 3D lattice L{sub 3D}{sup su{sub 3}×u{sub 1}} that host this theory. After that we build the lattice action S{sub latt} invariant under the following three points: (i) U(N) gauge invariance, (ii) BRST symmetry, (iii) the S{sub 3} point group symmetry of L{sub 3D}{sup su{sub 3}×u{sub 1}}. Other features such as reduction to twisted 2D supersymmetry with 8 supercharges living on L{sub 2D}≡L{sub 2D}{sup su{sub 2}×u{sub 1}}, the extension to twisted maximal 5D SYM with 16 supercharges on lattice L{sub 5D}≡L{sub 5D}{sup su{sub 4}×u{sub 1}} as well as the relation with known results are also given.

  10. Fiber optic coherent laser radar 3D vision system

    SciTech Connect

    Clark, R.B.; Gallman, P.G.; Slotwinski, A.R.; Wagner, K.; Weaver, S.; Xu, Jieping

    1996-12-31

    This CLVS will provide a substantial advance in high speed computer vision performance to support robotic Environmental Management (EM) operations. This 3D system employs a compact fiber optic based scanner and operator at a 128 x 128 pixel frame at one frame per second with a range resolution of 1 mm over its 1.5 meter working range. Using acousto-optic deflectors, the scanner is completely randomly addressable. This can provide live 3D monitoring for situations where it is necessary to update once per second. This can be used for decontamination and decommissioning operations in which robotic systems are altering the scene such as in waste removal, surface scarafacing, or equipment disassembly and removal. The fiber- optic coherent laser radar based system is immune to variations in lighting, color, or surface shading, which have plagued the reliability of existing 3D vision systems, while providing substantially superior range resolution.

  11. 3D printed long period gratings for optical fibers.

    PubMed

    Iezzi, Victor Lambin; Boisvert, Jean-Sébastien; Loranger, Sébastien; Kashyap, Raman

    2016-04-15

    We demonstrate a simple technique for implementing long period grating (LPG) structures by the use of a 3D printer. This Letter shows a way of manipulating the mode coupling within an optical fiber by applying stress through an external 3D printed periodic structure. Different LPG lengths and periods have been studied, as well as the effect of the applied stress on the coupling efficiency from the fundamental mode to cladding modes. The technique is very simple, highly flexible, affordable, and easy to implement without the need of altering the optical fiber. This Letter is part of a growing line of interest in the use of 3D printers for optical applications. PMID:27082365

  12. Optical fabrication of lightweighted 3D printed mirrors

    NASA Astrophysics Data System (ADS)

    Herzog, Harrison; Segal, Jacob; Smith, Jeremy; Bates, Richard; Calis, Jacob; De La Torre, Alyssa; Kim, Dae Wook; Mici, Joni; Mireles, Jorge; Stubbs, David M.; Wicker, Ryan

    2015-09-01

    Direct Metal Laser Sintering (DMLS) and Electron Beam Melting (EBM) 3D printing technologies were utilized to create lightweight, optical grade mirrors out of AlSi10Mg aluminum and Ti6Al4V titanium alloys at the University of Arizona in Tucson. The mirror prototypes were polished to meet the λ/20 RMS and λ/4 P-V surface figure requirements. The intent of this project was to design topologically optimized mirrors that had a high specific stiffness and low surface displacement. Two models were designed using Altair Inspire software, and the mirrors had to endure the polishing process with the necessary stiffness to eliminate print-through. Mitigating porosity of the 3D printed mirror blanks was a challenge in the face of reconciling new printing technologies with traditional optical polishing methods. The prototypes underwent Hot Isostatic Press (HIP) and heat treatment to improve density, eliminate porosity, and relieve internal stresses. Metal 3D printing allows for nearly unlimited topological constraints on design and virtually eliminates the need for a machine shop when creating an optical quality mirror. This research can lead to an increase in mirror mounting support complexity in the manufacturing of lightweight mirrors and improve overall process efficiency. The project aspired to have many future applications of light weighted 3D printed mirrors, such as spaceflight. This paper covers the design/fab/polish/test of 3D printed mirrors, thermal/structural finite element analysis, and results.

  13. Optically Addressed Spatial Light Modulators for 3d Display

    NASA Astrophysics Data System (ADS)

    Collings, N.

    An optically addressed spatial light modulator (OASLM) records the image on a write beam and transfers it to a read beam. Some example application areas are: image transduction; optical correlation; adaptive optics; and optical neural networks. Current interest in OASLMs has been generated by the work of Qinetiq on 3D display. This work is based on Active tiling, where an image can be recorded in one part of the device and is memorised, whilst the remainder of the device is updated with images. This paper will explain this system and survey the technological alternatives for this application.

  14. Beyond optical molasses: 3D raman sideband cooling of atomic cesium to high phase-space density

    PubMed

    Kerman; Vuletic; Chin; Chu

    2000-01-17

    We demonstrate a simple, general purpose method to cool neutral atoms. A sample containing 3x10(8) cesium atoms prepared in a magneto-optical trap is cooled and simultaneously spin polarized in 10 ms at a density of 1.1x10(11) cm (-3) to a phase space density nlambda(3)(dB) = 1/500, which is almost 3 orders of magnitude higher than attainable in free space with optical molasses. The technique is based on 3D degenerate Raman sideband cooling in optical lattices and remains efficient even at densities where the mean lattice site occupation is close to unity.

  15. Optical Abelian lattice gauge theories

    SciTech Connect

    Tagliacozzo, L.; Celi, A.; Zamora, A.; Lewenstein, M.

    2013-03-15

    We discuss a general framework for the realization of a family of Abelian lattice gauge theories, i.e., link models or gauge magnets, in optical lattices. We analyze the properties of these models that make them suitable for quantum simulations. Within this class, we study in detail the phases of a U(1)-invariant lattice gauge theory in 2+1 dimensions, originally proposed by P. Orland. By using exact diagonalization, we extract the low-energy states for small lattices, up to 4 Multiplication-Sign 4. We confirm that the model has two phases, with the confined entangled one characterized by strings wrapping around the whole lattice. We explain how to study larger lattices by using either tensor network techniques or digital quantum simulations with Rydberg atoms loaded in optical lattices, where we discuss in detail a protocol for the preparation of the ground-state. We propose two key experimental tests that can be used as smoking gun of the proper implementation of a gauge theory in optical lattices. These tests consist in verifying the absence of spontaneous (gauge) symmetry breaking of the ground-state and the presence of charge confinement. We also comment on the relation between standard compact U(1) lattice gauge theory and the model considered in this paper. - Highlights: Black-Right-Pointing-Pointer We study the quantum simulation of dynamical gauge theories in optical lattices. Black-Right-Pointing-Pointer We focus on digital simulation of abelian lattice gauge theory. Black-Right-Pointing-Pointer We rediscover and discuss the puzzling phase diagram of gauge magnets. Black-Right-Pointing-Pointer We detail the protocol for time evolution and ground-state preparation in any phase. Black-Right-Pointing-Pointer We provide two experimental tests to validate gauge theory quantum simulators.

  16. Loading mode dependent effective properties of octet-truss lattice structures using 3D-printing

    NASA Astrophysics Data System (ADS)

    Challapalli, Adithya

    Cellular materials, often called lattice materials, are increasingly receiving attention for their ultralight structures with high specific strength, excellent impact absorption, acoustic insulation, heat dissipation media and compact heat exchangers. In alignment with emerging additive manufacturing (AM) technology, realization of the structural applications of the lattice materials appears to be becoming faster. Considering the direction dependent material properties of the products with AM, by directionally dependent printing resolution, effective moduli of lattice structures appear to be directionally dependent. In this paper, a constitutive model of a lattice structure, which is an octet-truss with a base material having an orthotropic material property considering AM is developed. In a case study, polyjet based 3D printing material having an orthotropic property with a 9% difference in the principal direction provides difference in the axial and shear moduli in the octet-truss by 2.3 and 4.6%. Experimental validation for the effective properties of a 3D printed octet-truss is done for uniaxial tension and compression test. The theoretical value based on the micro-buckling of truss member are used to estimate the failure strength. Modulus value appears a little overestimate compared with the experiment. Finite element (FE) simulations for uniaxial compression and tension of octettruss lattice materials are conducted. New effective properties for the octet-truss lattice structure are developed considering the observed behavior of the octet-truss structure under macroscopic compression and tension trough simulations.

  17. Automatic respiration tracking for radiotherapy using optical 3D camera

    NASA Astrophysics Data System (ADS)

    Li, Tuotuo; Geng, Jason; Li, Shidong

    2013-03-01

    Rapid optical three-dimensional (O3D) imaging systems provide accurate digitized 3D surface data in real-time, with no patient contact nor radiation. The accurate 3D surface images offer crucial information in image-guided radiation therapy (IGRT) treatments for accurate patient repositioning and respiration management. However, applications of O3D imaging techniques to image-guided radiotherapy have been clinically challenged by body deformation, pathological and anatomical variations among individual patients, extremely high dimensionality of the 3D surface data, and irregular respiration motion. In existing clinical radiation therapy (RT) procedures target displacements are caused by (1) inter-fractional anatomy changes due to weight, swell, food/water intake; (2) intra-fractional variations from anatomy changes within any treatment session due to voluntary/involuntary physiologic processes (e.g. respiration, muscle relaxation); (3) patient setup misalignment in daily reposition due to user errors; and (4) changes of marker or positioning device, etc. Presently, viable solution is lacking for in-vivo tracking of target motion and anatomy changes during the beam-on time without exposing patient with additional ionized radiation or high magnet field. Current O3D-guided radiotherapy systems relay on selected points or areas in the 3D surface to track surface motion. The configuration of the marks or areas may change with time that makes it inconsistent in quantifying and interpreting the respiration patterns. To meet the challenge of performing real-time respiration tracking using O3D imaging technology in IGRT, we propose a new approach to automatic respiration motion analysis based on linear dimensionality reduction technique based on PCA (principle component analysis). Optical 3D image sequence is decomposed with principle component analysis into a limited number of independent (orthogonal) motion patterns (a low dimension eigen-space span by eigen-vectors). New

  18. Implementation of 3D Optical Scanning Technology for Automotive Applications.

    PubMed

    Kuş, Abdil

    2009-01-01

    Reverse engineering (RE) is a powerful tool for generating a CAD model from the 3D scan data of a physical part that lacks documentation or has changed from the original CAD design of the part. The process of digitizing a part and creating a CAD model from 3D scan data is less time consuming and provides greater accuracy than manually measuring the part and designing the part from scratch in CAD. 3D optical scanning technology is one of the measurement methods which have evolved over the last few years and it is used in a wide range of areas from industrial applications to art and cultural heritage. It is also used extensively in the automotive industry for applications such as part inspections, scanning of tools without CAD definition, scanning the casting for definition of the stock (i.e. the amount of material to be removed from the surface of the castings) model for CAM programs and reverse engineering. In this study two scanning experiments of automotive applications are illustrated. The first one examines the processes from scanning to re-manufacturing the damaged sheet metal cutting die, using a 3D scanning technique and the second study compares the scanned point clouds data to 3D CAD data for inspection purposes. Furthermore, the deviations of the part holes are determined by using different lenses and scanning parameters. PMID:22573995

  19. Implementation of 3D Optical Scanning Technology for Automotive Applications

    PubMed Central

    Kuş, Abdil

    2009-01-01

    Reverse engineering (RE) is a powerful tool for generating a CAD model from the 3D scan data of a physical part that lacks documentation or has changed from the original CAD design of the part. The process of digitizing a part and creating a CAD model from 3D scan data is less time consuming and provides greater accuracy than manually measuring the part and designing the part from scratch in CAD. 3D optical scanning technology is one of the measurement methods which have evolved over the last few years and it is used in a wide range of areas from industrial applications to art and cultural heritage. It is also used extensively in the automotive industry for applications such as part inspections, scanning of tools without CAD definition, scanning the casting for definition of the stock (i.e. the amount of material to be removed from the surface of the castings) model for CAM programs and reverse engineering. In this study two scanning experiments of automotive applications are illustrated. The first one examines the processes from scanning to re-manufacturing the damaged sheet metal cutting die, using a 3D scanning technique and the second study compares the scanned point clouds data to 3D CAD data for inspection purposes. Furthermore, the deviations of the part holes are determined by using different lenses and scanning parameters. PMID:22573995

  20. Implementation of 3D Optical Scanning Technology for Automotive Applications.

    PubMed

    Kuş, Abdil

    2009-01-01

    Reverse engineering (RE) is a powerful tool for generating a CAD model from the 3D scan data of a physical part that lacks documentation or has changed from the original CAD design of the part. The process of digitizing a part and creating a CAD model from 3D scan data is less time consuming and provides greater accuracy than manually measuring the part and designing the part from scratch in CAD. 3D optical scanning technology is one of the measurement methods which have evolved over the last few years and it is used in a wide range of areas from industrial applications to art and cultural heritage. It is also used extensively in the automotive industry for applications such as part inspections, scanning of tools without CAD definition, scanning the casting for definition of the stock (i.e. the amount of material to be removed from the surface of the castings) model for CAM programs and reverse engineering. In this study two scanning experiments of automotive applications are illustrated. The first one examines the processes from scanning to re-manufacturing the damaged sheet metal cutting die, using a 3D scanning technique and the second study compares the scanned point clouds data to 3D CAD data for inspection purposes. Furthermore, the deviations of the part holes are determined by using different lenses and scanning parameters.

  1. Tactile-optical 3D sensor applying image processing

    NASA Astrophysics Data System (ADS)

    Neuschaefer-Rube, Ulrich; Wissmann, Mark

    2009-01-01

    The tactile-optical probe (so-called fiber probe) is a well-known probe in micro-coordinate metrology. It consists of an optical fiber with a probing element at its end. This probing element is adjusted in the imaging plane of the optical system of an optical coordinate measuring machine (CMM). It can be illuminated through the fiber by a LED. The position of the probe is directly detected by image processing algorithms available in every modern optical CMM and not by deflections at the fixation of the probing shaft. Therefore, the probing shaft can be very thin and flexible. This facilitates the measurement with very small probing forces and the realization of very small probing elements (diameter: down to 10 μm). A limitation of this method is that at present the probe does not have full 3D measurement capability. At the Physikalisch-Technische Bundesanstalt (PTB), several arrangements and measurement principles for a full 3D tactile-optical probe have been implemented and tested successfully in cooperation with Werth-Messtechnik, Giessen, Germany. This contribution provides an overview of the results of these activities.

  2. Optical Sensors and Methods for Underwater 3D Reconstruction

    PubMed Central

    Massot-Campos, Miquel; Oliver-Codina, Gabriel

    2015-01-01

    This paper presents a survey on optical sensors and methods for 3D reconstruction in underwater environments. The techniques to obtain range data have been listed and explained, together with the different sensor hardware that makes them possible. The literature has been reviewed, and a classification has been proposed for the existing solutions. New developments, commercial solutions and previous reviews in this topic have also been gathered and considered. PMID:26694389

  3. Competing anisotropies on 3d sub-lattice of YNi4-xCoxB compounds

    NASA Astrophysics Data System (ADS)

    Caraballo Vivas, R. J.; Rocco, D. L.; Costa Soares, T.; Caldeira, L.; Coelho, A. A.; Reis, M. S.

    2014-08-01

    The magnetic anisotropy of 3d sub-lattices has an important rule on the overall magnetic properties of hard magnets. Intermetallics alloys with boron (R-Co/Ni-B, for instance) belong to those hard magnets family and are useful objects to help to understand the magnetic behavior of 3d sub-lattice, specially when the rare earth ions R do not have magnetic nature, like YCo4B ferromagnetic material. Interestingly, YNi4B is a paramagnetic material and Ni ions do not contribute to the magnetic anisotropy. We focused therefore our attention to YNi4-xCoxB series, with x = 0, 1, 2, 3, and 4. The magnetic anisotropy of these compounds is deeper described using statistical and preferential models of Co occupation among the possible Wyckoff positions into the CeCo4B type hexagonal structure. We found that the preferential model is the most suitable to explain the magnetization experimental data.

  4. Open-source 3D-printable optics equipment.

    PubMed

    Zhang, Chenlong; Anzalone, Nicholas C; Faria, Rodrigo P; Pearce, Joshua M

    2013-01-01

    Just as the power of the open-source design paradigm has driven down the cost of software to the point that it is accessible to most people, the rise of open-source hardware is poised to drive down the cost of doing experimental science to expand access to everyone. To assist in this aim, this paper introduces a library of open-source 3-D-printable optics components. This library operates as a flexible, low-cost public-domain tool set for developing both research and teaching optics hardware. First, the use of parametric open-source designs using an open-source computer aided design package is described to customize the optics hardware for any application. Second, details are provided on the use of open-source 3-D printers (additive layer manufacturing) to fabricate the primary mechanical components, which are then combined to construct complex optics-related devices. Third, the use of the open-source electronics prototyping platform are illustrated as control for optical experimental apparatuses. This study demonstrates an open-source optical library, which significantly reduces the costs associated with much optical equipment, while also enabling relatively easily adapted customizable designs. The cost reductions in general are over 97%, with some components representing only 1% of the current commercial investment for optical products of similar function. The results of this study make its clear that this method of scientific hardware development enables a much broader audience to participate in optical experimentation both as research and teaching platforms than previous proprietary methods.

  5. Open-Source 3D-Printable Optics Equipment

    PubMed Central

    Zhang, Chenlong; Anzalone, Nicholas C.; Faria, Rodrigo P.; Pearce, Joshua M.

    2013-01-01

    Just as the power of the open-source design paradigm has driven down the cost of software to the point that it is accessible to most people, the rise of open-source hardware is poised to drive down the cost of doing experimental science to expand access to everyone. To assist in this aim, this paper introduces a library of open-source 3-D-printable optics components. This library operates as a flexible, low-cost public-domain tool set for developing both research and teaching optics hardware. First, the use of parametric open-source designs using an open-source computer aided design package is described to customize the optics hardware for any application. Second, details are provided on the use of open-source 3-D printers (additive layer manufacturing) to fabricate the primary mechanical components, which are then combined to construct complex optics-related devices. Third, the use of the open-source electronics prototyping platform are illustrated as control for optical experimental apparatuses. This study demonstrates an open-source optical library, which significantly reduces the costs associated with much optical equipment, while also enabling relatively easily adapted customizable designs. The cost reductions in general are over 97%, with some components representing only 1% of the current commercial investment for optical products of similar function. The results of this study make its clear that this method of scientific hardware development enables a much broader audience to participate in optical experimentation both as research and teaching platforms than previous proprietary methods. PMID:23544104

  6. Open-source 3D-printable optics equipment.

    PubMed

    Zhang, Chenlong; Anzalone, Nicholas C; Faria, Rodrigo P; Pearce, Joshua M

    2013-01-01

    Just as the power of the open-source design paradigm has driven down the cost of software to the point that it is accessible to most people, the rise of open-source hardware is poised to drive down the cost of doing experimental science to expand access to everyone. To assist in this aim, this paper introduces a library of open-source 3-D-printable optics components. This library operates as a flexible, low-cost public-domain tool set for developing both research and teaching optics hardware. First, the use of parametric open-source designs using an open-source computer aided design package is described to customize the optics hardware for any application. Second, details are provided on the use of open-source 3-D printers (additive layer manufacturing) to fabricate the primary mechanical components, which are then combined to construct complex optics-related devices. Third, the use of the open-source electronics prototyping platform are illustrated as control for optical experimental apparatuses. This study demonstrates an open-source optical library, which significantly reduces the costs associated with much optical equipment, while also enabling relatively easily adapted customizable designs. The cost reductions in general are over 97%, with some components representing only 1% of the current commercial investment for optical products of similar function. The results of this study make its clear that this method of scientific hardware development enables a much broader audience to participate in optical experimentation both as research and teaching platforms than previous proprietary methods. PMID:23544104

  7. Fiber optic coherent laser radar 3d vision system

    SciTech Connect

    Sebastian, R.L.; Clark, R.B.; Simonson, D.L.

    1994-12-31

    Recent advances in fiber optic component technology and digital processing components have enabled the development of a new 3D vision system based upon a fiber optic FMCW coherent laser radar. The approach includes a compact scanner with no moving parts capable of randomly addressing all pixels. The system maintains the immunity to lighting and surface shading conditions which is characteristic of coherent laser radar. The random pixel addressability allows concentration of scanning and processing on the active areas of a scene, as is done by the human eye-brain system.

  8. Large optical 3D MEMS switches in access networks

    NASA Astrophysics Data System (ADS)

    Madamopoulos, Nicholas; Kaman, Volkan; Yuan, Shifu; Jerphagnon, Olivier; Helkey, Roger; Bowers, John E.

    2007-09-01

    Interest is high among residential customers and businesses for advanced, broadband services such as fast Internet access, electronic commerce, video-on-demand, digital broadcasting, teleconferencing and telemedicine. In order to satisfy such growing demand of end-customers, access technologies such as fiber-to-the-home/building (FTTH/B) are increasingly being deployed. Carriers can reduce maintenance costs, minimize technology obsolescence and introduce new services easily by reducing active elements in the fiber access network. However, having a passive optical network (PON) also introduces operational and maintenance challenges. Increased diagnostic monitoring capability of the network becomes a necessity as more and more fibers are provisioned to deliver services to the end-customers. This paper demonstrates the clear advantages that large 3D optical MEMS switches offer in solving these access network problems. The advantages in preventative maintenance, remote monitoring, test and diagnostic capability are highlighted. The low optical insertion loss for all switch optical connections of the switch enables the monitoring, grooming and serving of a large number of PON lines and customers. Furthermore, the 3D MEMS switch is transparent to optical wavelengths and data formats, thus making it easy to incorporate future upgrades, such higher bit rates or DWDM overlay to a PON.

  9. Enhanced hybrid search algorithm for protein structure prediction using the 3D-HP lattice model.

    PubMed

    Zhou, Changjun; Hou, Caixia; Zhang, Qiang; Wei, Xiaopeng

    2013-09-01

    The problem of protein structure prediction in the hydrophobic-polar (HP) lattice model is the prediction of protein tertiary structure. This problem is usually referred to as the protein folding problem. This paper presents a method for the application of an enhanced hybrid search algorithm to the problem of protein folding prediction, using the three dimensional (3D) HP lattice model. The enhanced hybrid search algorithm is a combination of the particle swarm optimizer (PSO) and tabu search (TS) algorithms. Since the PSO algorithm entraps local minimum in later evolution extremely easily, we combined PSO with the TS algorithm, which has properties of global optimization. Since the technologies of crossover and mutation are applied many times to PSO and TS algorithms, so enhanced hybrid search algorithm is called the MCMPSO-TS (multiple crossover and mutation PSO-TS) algorithm. Experimental results show that the MCMPSO-TS algorithm can find the best solutions so far for the listed benchmarks, which will help comparison with any future paper approach. Moreover, real protein sequences and Fibonacci sequences are verified in the 3D HP lattice model for the first time. Compared with the previous evolutionary algorithms, the new hybrid search algorithm is novel, and can be used effectively to predict 3D protein folding structure. With continuous development and changes in amino acids sequences, the new algorithm will also make a contribution to the study of new protein sequences. PMID:23824509

  10. Constructing 3D microtubule networks using holographic optical trapping

    PubMed Central

    Bergman, J.; Osunbayo, O.; Vershinin, M.

    2015-01-01

    Developing abilities to assemble nanoscale structures is a major scientific and engineering challenge. We report a technique which allows precise positioning and manipulation of individual rigid filaments, enabling construction of custom-designed 3D filament networks. This approach uses holographic optical trapping (HOT) for nano-positioning and microtubules (MTs) as network building blocks. MTs are desirable engineering components due to their high aspect ratio, rigidity, and their ability to serve as substrate for directed nano-transport, reflecting their roles in the eukaryotic cytoskeleton. The 3D architecture of MT cytoskeleton is a significant component of its function, however experimental tools to study the roles of this geometric complexity in a controlled environment have been lacking. We demonstrate the broad capabilities of our system by building a self-supporting 3D MT-based nanostructure and by conducting a MT-based transport experiment on a dynamically adjustable 3D MT intersection. Our methodology not only will advance studies of cytoskeletal networks (and associated processes such as MT-based transport) but will also likely find use in engineering nanostructures and devices. PMID:26657337

  11. 3D Human cartilage surface characterization by optical coherence tomography

    NASA Astrophysics Data System (ADS)

    Brill, Nicolai; Riedel, Jörn; Schmitt, Robert; Tingart, Markus; Truhn, Daniel; Pufe, Thomas; Jahr, Holger; Nebelung, Sven

    2015-10-01

    Early diagnosis and treatment of cartilage degeneration is of high clinical interest. Loss of surface integrity is considered one of the earliest and most reliable signs of degeneration, but cannot currently be evaluated objectively. Optical Coherence Tomography (OCT) is an arthroscopically available light-based non-destructive real-time imaging technology that allows imaging at micrometre resolutions to millimetre depths. As OCT-based surface evaluation standards remain to be defined, the present study investigated the diagnostic potential of 3D surface profile parameters in the comprehensive evaluation of cartilage degeneration. To this end, 45 cartilage samples of different degenerative grades were obtained from total knee replacements (2 males, 10 females; mean age 63.8 years), cut to standard size and imaged using a spectral-domain OCT device (Thorlabs, Germany). 3D OCT datasets of 8  ×  8, 4  ×  4 and 1  ×  1 mm (width  ×  length) were obtained and pre-processed (image adjustments, morphological filtering). Subsequent automated surface identification algorithms were used to obtain the 3D primary profiles, which were then filtered and processed using established algorithms employing ISO standards. The 3D surface profile thus obtained was used to calculate a set of 21 3D surface profile parameters, i.e. height (e.g. Sa), functional (e.g. Sk), hybrid (e.g. Sdq) and segmentation-related parameters (e.g. Spd). Samples underwent reference histological assessment according to the Degenerative Joint Disease classification. Statistical analyses included calculation of Spearman’s rho and assessment of inter-group differences using the Kruskal Wallis test. Overall, the majority of 3D surface profile parameters revealed significant degeneration-dependent differences and correlations with the exception of severe end-stage degeneration and were of distinct diagnostic value in the assessment of surface integrity. None of the 3D

  12. Multimodal 3D cancer-mimicking optical phantom

    PubMed Central

    Smith, Gennifer T.; Lurie, Kristen L.; Zlatev, Dimitar V.; Liao, Joseph C.; Ellerbee Bowden, Audrey K.

    2016-01-01

    Three-dimensional (3D) organ-mimicking phantoms provide realistic imaging environments for testing various aspects of optical systems, including for evaluating new probe designs, characterizing the diagnostic potential of new technologies, and assessing novel image processing algorithms prior to validation in real tissue. We introduce and characterize the use of a new material, Dragon Skin (Smooth-On Inc.), and fabrication technique, air-brushing, for fabrication of a 3D phantom that mimics the appearance of a real organ under multiple imaging modalities. We demonstrate the utility of the material and technique by fabricating the first 3D, hollow bladder phantom with realistic normal and multi-stage pathology features suitable for endoscopic detection using the gold standard imaging technique, white light cystoscopy (WLC), as well as the complementary imaging modalities of optical coherence tomography and blue light cystoscopy, which are aimed at improving the sensitivity and specificity of WLC to bladder cancer detection. The flexibility of the material and technique used for phantom construction allowed for the representation of a wide range of diseased tissue states, ranging from inflammation (benign) to high-grade cancerous lesions. Such phantoms can serve as important tools for trainee education and evaluation of new endoscopic instrumentation. PMID:26977369

  13. Optic flow aided navigation and 3D scene reconstruction

    NASA Astrophysics Data System (ADS)

    Rollason, Malcolm

    2013-10-01

    An important enabler for low cost airborne systems is the ability to exploit low cost inertial instruments. An Inertial Navigation System (INS) can provide a navigation solution, when GPS is denied, by integrating measurements from inertial sensors. However, the gyrometer and accelerometer biases of low cost inertial sensors cause compound errors in the integrated navigation solution. This paper describes experiments to establish whether (and to what extent) the navigation solution can be aided by fusing measurements from an on-board video camera with measurements from the inertial sensors. The primary aim of the work was to establish whether optic flow aided navigation is beneficial even when the 3D structure within the observed scene is unknown. A further aim was to investigate whether an INS can help to infer 3D scene content from video. Experiments with both real and synthetic data have been conducted. Real data was collected using an AR Parrot quadrotor. Empirical results illustrate that optic flow provides a useful aid to navigation even when the 3D structure of the observed scene is not known. With optic flow aiding of the INS, the computed trajectory is consistent with the true camera motion, whereas the unaided INS yields a rapidly increasing position error (the data represents ~40 seconds, after which the unaided INS is ~50 metres in error and has passed through the ground). The results of the Monte Carlo simulation concur with the empirical result. Position errors, which grow as a quadratic function of time when unaided, are substantially checked by the availability of optic flow measurements.

  14. Beam Optics Analysis - An Advanced 3D Trajectory Code

    SciTech Connect

    Ives, R. Lawrence; Bui, Thuc; Vogler, William; Neilson, Jeff; Read, Mike; Shephard, Mark; Bauer, Andrew; Datta, Dibyendu; Beal, Mark

    2006-01-03

    Calabazas Creek Research, Inc. has completed initial development of an advanced, 3D program for modeling electron trajectories in electromagnetic fields. The code is being used to design complex guns and collectors. Beam Optics Analysis (BOA) is a fully relativistic, charged particle code using adaptive, finite element meshing. Geometrical input is imported from CAD programs generating ACIS-formatted files. Parametric data is inputted using an intuitive, graphical user interface (GUI), which also provides control of convergence, accuracy, and post processing. The program includes a magnetic field solver, and magnetic information can be imported from Maxwell 2D/3D and other programs. The program supports thermionic emission and injected beams. Secondary electron emission is also supported, including multiple generations. Work on field emission is in progress as well as implementation of computer optimization of both the geometry and operating parameters. The principle features of the program and its capabilities are presented.

  15. Beam Optics Analysis — An Advanced 3D Trajectory Code

    NASA Astrophysics Data System (ADS)

    Ives, R. Lawrence; Bui, Thuc; Vogler, William; Neilson, Jeff; Read, Mike; Shephard, Mark; Bauer, Andrew; Datta, Dibyendu; Beal, Mark

    2006-01-01

    Calabazas Creek Research, Inc. has completed initial development of an advanced, 3D program for modeling electron trajectories in electromagnetic fields. The code is being used to design complex guns and collectors. Beam Optics Analysis (BOA) is a fully relativistic, charged particle code using adaptive, finite element meshing. Geometrical input is imported from CAD programs generating ACIS-formatted files. Parametric data is inputted using an intuitive, graphical user interface (GUI), which also provides control of convergence, accuracy, and post processing. The program includes a magnetic field solver, and magnetic information can be imported from Maxwell 2D/3D and other programs. The program supports thermionic emission and injected beams. Secondary electron emission is also supported, including multiple generations. Work on field emission is in progress as well as implementation of computer optimization of both the geometry and operating parameters. The principle features of the program and its capabilities are presented.

  16. Single 3D cell segmentation from optical CT microscope images

    NASA Astrophysics Data System (ADS)

    Xie, Yiting; Reeves, Anthony P.

    2014-03-01

    The automated segmentation of the nucleus and cytoplasm regions in 3D optical CT microscope images has been achieved with two methods, a global threshold gradient based approach and a graph-cut approach. For the first method, the first two peaks of a gradient figure of merit curve are selected as the thresholds for cytoplasm and nucleus segmentation. The second method applies a graph-cut segmentation twice: the first identifies the nucleus region and the second identifies the cytoplasm region. Image segmentation of single cells is important for automated disease diagnostic systems. The segmentation methods were evaluated with 200 3D images consisting of 40 samples of 5 different cell types. The cell types consisted of columnar, macrophage, metaplastic and squamous human cells and cultured A549 cancer cells. The segmented cells were compared with both 2D and 3D reference images and the quality of segmentation was determined by the Dice Similarity Coefficient (DSC). In general, the graph-cut method had a superior performance to the gradient-based method. The graph-cut method achieved an average DSC of 86% and 72% for nucleus and cytoplasm segmentations respectively for the 2D reference images and 83% and 75% for the 3D reference images. The gradient method achieved an average DSC of 72% and 51% for nucleus and cytoplasm segmentation for the 2D reference images and 71% and 51% for the 3D reference images. The DSC of cytoplasm segmentation was significantly lower than for the nucleus since the cytoplasm was not differentiated as well by image intensity from the background.

  17. Calibration of optical 3D-measuring instruments

    NASA Astrophysics Data System (ADS)

    Brand, Uwe

    1998-09-01

    For the inspection and measurement of microstructures small accurate three-dimensional coordinate measuring machines are needed. Typical measurement volumes are 10 mm by 10 mm by 3 mm and the desired 3D-measurement uncertainty is 0.1 micrometer. Up to now only optical coordinate measuring machines (CMM) offer the necessary lateral measurement ranges. But optical CMMs are restricted to two-dimensional measurements and moreover the aimed uncertainty has not been achieved yet. Since a few years new optical techniques are available which are able to measure nearly three-dimensionally (scanning white light, fringe projection, confocal microscopy, photogrammetry). In order to use these instruments and to specify their measurement uncertainty, calibration of these instruments is necessary. The calibration of the three measurement axes is divided into calibration of the lateral axes and calibration of the vertical axis. The contribution focuses on the development of new depth setting standards (1 micrometer - 1 milimeter) and their traceability.

  18. Innovations in 3D printing: a 3D overview from optics to organs.

    PubMed

    Schubert, Carl; van Langeveld, Mark C; Donoso, Larry A

    2014-02-01

    3D printing is a method of manufacturing in which materials, such as plastic or metal, are deposited onto one another in layers to produce a three dimensional object, such as a pair of eye glasses or other 3D objects. This process contrasts with traditional ink-based printers which produce a two dimensional object (ink on paper). To date, 3D printing has primarily been used in engineering to create engineering prototypes. However, recent advances in printing materials have now enabled 3D printers to make objects that are comparable with traditionally manufactured items. In contrast with conventional printers, 3D printing has the potential to enable mass customisation of goods on a large scale and has relevance in medicine including ophthalmology. 3D printing has already been proved viable in several medical applications including the manufacture of eyeglasses, custom prosthetic devices and dental implants. In this review, we discuss the potential for 3D printing to revolutionise manufacturing in the same way as the printing press revolutionised conventional printing. The applications and limitations of 3D printing are discussed; the production process is demonstrated by producing a set of eyeglass frames from 3D blueprints. PMID:24288392

  19. Innovations in 3D printing: a 3D overview from optics to organs.

    PubMed

    Schubert, Carl; van Langeveld, Mark C; Donoso, Larry A

    2014-02-01

    3D printing is a method of manufacturing in which materials, such as plastic or metal, are deposited onto one another in layers to produce a three dimensional object, such as a pair of eye glasses or other 3D objects. This process contrasts with traditional ink-based printers which produce a two dimensional object (ink on paper). To date, 3D printing has primarily been used in engineering to create engineering prototypes. However, recent advances in printing materials have now enabled 3D printers to make objects that are comparable with traditionally manufactured items. In contrast with conventional printers, 3D printing has the potential to enable mass customisation of goods on a large scale and has relevance in medicine including ophthalmology. 3D printing has already been proved viable in several medical applications including the manufacture of eyeglasses, custom prosthetic devices and dental implants. In this review, we discuss the potential for 3D printing to revolutionise manufacturing in the same way as the printing press revolutionised conventional printing. The applications and limitations of 3D printing are discussed; the production process is demonstrated by producing a set of eyeglass frames from 3D blueprints.

  20. Precision 3-D microscopy with intensity modulated fibre optic scanners

    NASA Astrophysics Data System (ADS)

    Olmos, P.

    2016-01-01

    Optical 3-D imagers constitute a family of precision and useful instruments, easily available on the market in a wide variety of configurations and performances. However, besides their cost they usually provide an image of the object (i.e. a more or less faithful representation of the reality) instead of a truly object's reconstruction. Depending on the detailed working principles of the equipment, this reconstruction may become a challenging task. Here a very simple yet reliable device is described; it is able to form images of opaque objects by illuminating them with an optical fibre and collecting the reflected light with another fibre. Its 3-D capability comes from the spatial filtering imposed by the fibres together with their movement (scanning) along the three directions: transversal (surface) and vertical. This unsophisticated approach allows one to model accurately the entire optical process and to perform the desired reconstruction, finding that information about the surface which is of interest: its profile and its reflectance, ultimately related to the type of material.

  1. Optical monitoring of scoliosis by 3D medical laser scanner

    NASA Astrophysics Data System (ADS)

    Rodríguez-Quiñonez, Julio C.; Sergiyenko, Oleg Yu.; Preciado, Luis C. Basaca; Tyrsa, Vera V.; Gurko, Alexander G.; Podrygalo, Mikhail A.; Lopez, Moises Rivas; Balbuena, Daniel Hernandez

    2014-03-01

    Three dimensional recording of the human body surface or anatomical areas have gained importance in many medical applications. In this paper, our 3D Medical Laser Scanner is presented. It is based on the novel principle of dynamic triangulation. We analyze the method of operation, medical applications, orthopedically diseases as Scoliosis and the most common types of skin to employ the system the most proper way. It is analyzed a group of medical problems related to the application of optical scanning in optimal way. Finally, experiments are conducted to verify the performance of the proposed system and its method uncertainty.

  2. Towards 3-D laser nano patterning in polymer optical materials

    NASA Astrophysics Data System (ADS)

    Scully, Patricia J.; Perrie, Walter

    2015-03-01

    Progress towards 3-D subsurface structuring of polymers using femtosecond lasers is presented. Highly localised refractive index changes can be generated deep in transparent optical polymers without pre doping for photosensitisation or post processing by annealing. Understanding the writing conditions surpasses the limitations of materials, dimensions and chemistry, to facilitate unique structures entirely formed by laser-polymeric interactions to overcome materials, dimensional, refractive index and wavelength constraints.. Numerical aperture, fluence, temporal pulselength, wavelength and incident polarisation are important parameters to be considered, in achieving the desired inscription. Non-linear aspects of multiphoton absorption, plasma generation, filamentation and effects of incident polarisation on the writing conditions will be presented.

  3. Design of Chern and Mott insulators in buckled 3 d oxide honeycomb lattices

    NASA Astrophysics Data System (ADS)

    Doennig, David; Baidya, Santu; Pickett, Warren E.; Pentcheva, Rossitza

    2016-04-01

    Perovskite (La X O3 )2/(LaAlO3)4(111) superlattices with X spanning the entire 3 d transition-metal series combine the strongly correlated, multiorbital nature of electrons in transition-metal oxides with a honeycomb lattice as a key feature. Based on density functional theory calculations including strong interaction effects, we establish trends in the evolution of electronic states as a function of several control parameters: band filling, interaction strength, spin-orbit coupling (SOC), and lattice instabilities. Competition between local pseudocubic and global trigonal symmetry as well as the additional flexibility provided by the magnetic and spin degrees of freedom of 3 d ions lead to a broad array of distinctive broken-symmetry ground states not accessible for the (001)-growth direction, offering a platform to design two-dimensional electronic functionalities. Constraining the symmetry between the two triangular sublattices causes X =Mn , Co, and Ti to emerge as Chern insulators driven by SOC. For X =Mn we illustrate how interaction strength and lattice distortions can tune these systems between a Dirac semimetal, a Chern and a trivial Mott insulator.

  4. Investigation the effect of lattice angle on the band structure in 3D phononic crystals with rhombohedral(II) lattice

    NASA Astrophysics Data System (ADS)

    Aryadoust, M.; Salehi, H.

    2014-12-01

    In this paper, the propagation of acoustic waves in the phononic crystals (PC) of 3D with rhombohedral(II) lattice is studied theoretically. The PC are constituted of nickel spheres embedded in epoxy. The calculations of the band structure and density of states are performed with the plane wave expansion method in the irreducible part of the Brillouin zone (BZ). In this study, we analyze the dependence of the band structures inside (the complete band gap width) and outside the complete band gap (negative refraction of acoustic wave) on the lattice angle in the irreducible part of the first BZ. Also the effect of lattice angle has been analyzed on the band structure of the () and (122) planes. Then, the equifrequency surface is calculated for the high symmetry point in the [111] and [100] directions. The results show that the maximum width of AEBG (0.022) in the irreducible part of the BZ of RHL2 is formed for (105∘) and no AEBG is found for γ > 150∘. Also, the maximum of the first and second AEBG width are 0.1076 and 0.0523 for γ = 133∘ in the () plane and the maximum of the first and second AEBG width are 0.1446 and 0.0998 for γ = 113∘ in the (122) plane. In addition, we have found that frequencies in which negative refraction occurs is constant for all lattice angles.

  5. 3D refractive index measurements of special optical fibers

    NASA Astrophysics Data System (ADS)

    Yan, Cheng; Huang, Su-Juan; Miao, Zhuang; Chang, Zheng; Zeng, Jun-Zhang; Wang, Ting-Yun

    2016-09-01

    A digital holographic microscopic chromatography-based approach with considerably improved accuracy, simplified configuration and performance stability is proposed to measure three dimensional refractive index of special optical fibers. Based on the approach, a measurement system is established incorporating a modified Mach-Zehnder interferometer and lab-developed supporting software for data processing. In the system, a phase projection distribution of an optical fiber is utilized to obtain an optimal digital hologram recorded by a CCD, and then an angular spectrum theory-based algorithm is adopted to extract the phase distribution information of an object wave. The rotation of the optic fiber enables the experimental measurements of multi-angle phase information. Based on the filtered back projection algorithm, a 3D refraction index of the optical fiber is thus obtained at high accuracy. To evaluate the proposed approach, both PANDA fibers and special elliptical optical fiber are considered in the system. The results measured in PANDA fibers agree well with those measured using S14 Refractive Index Profiler, which is, however, not suitable for measuring the property of a special elliptical fiber.

  6. Rapid prototyping with optical 3D measurement systems

    NASA Astrophysics Data System (ADS)

    Gaessler, J.; Blount, G. N.; Jones, R. M.

    1994-11-01

    One of the important tools for speeding up the prototyping of an new industrial or consumer product is the rapid generation of CAD data from hand-made styling models and moulds. We present a new optical 3D digitizing system which produces in a fully automatic way non- ambiguous, absolute and complete surface coordinate data of very complex objects in a short time. The system named `OptoShape' is based on a projection of sinusoidal fringes with a true grey-level matrix projector. The system measures both non-ambiguous and absolute XYZ surface data with a pronounced robustness towards optical surface properties. By moving the 3D sensor head around the object to be digitized with a 3/5 axes manipulator, multiple range images are obtained and automatically merged into a unified cloud of point coordinates. This set of surface coordinates are transferred to a software package where interactive manipulation, sectioning and semi-automatic generation of CAD surface descriptions are performed. CNC data can also be directly generated from the point surface coordinate data set.

  7. Deconfinement Phase Transition in a 3D Nonlocal U(1) Lattice Gauge Theory

    SciTech Connect

    Arakawa, Gaku; Ichinose, Ikuo; Matsui, Tetsuo; Sakakibara, Kazuhiko

    2005-06-03

    We introduce a 3D compact U(1) lattice gauge theory having nonlocal interactions in the temporal direction, and study its phase structure. The model is relevant for the compact QED{sub 3} and strongly correlated electron systems like the t-J model of cuprates. For a power-law decaying long-range interaction, which simulates the effect of gapless matter fields, a second-order phase transition takes place separating the confinement and deconfinement phases. For an exponentially decaying interaction simulating matter fields with gaps, the system exhibits no signals of a second-order transition.

  8. Quantitative 3D Optical Imaging: Applications in Dosimetry and Biophysics

    NASA Astrophysics Data System (ADS)

    Thomas, Andrew Stephen

    Optical-CT has been shown to be a potentially useful imaging tool for the two very different spheres of biologists and radiation therapy physicists, but it has yet to live up to that potential. In radiation therapy, researchers have used optical-CT for the readout of 3D dosimeters, but it is yet to be a clinically relevant tool as the technology is too slow to be considered practical. Biologists have used the technique for structural imaging, but have struggled with emission tomography as the reality of photon attenuation for both excitation and emission have made the images quantitatively irrelevant. Dosimetry. The DLOS (Duke Large field of view Optical-CT Scanner) was designed and constructed to make 3D dosimetry utilizing optical-CT a fast and practical tool while maintaining the accuracy of readout of the previous, slower readout technologies. Upon construction/optimization/implementation of several components including a diffuser, band pass filter, registration mount & fluid filtration system the dosimetry system provides high quality data comparable to or exceeding that of commercial products. In addition, a stray light correction algorithm was tested and implemented. The DLOS in combination with the 3D dosimeter it was designed for, PREAGETM, then underwent rigorous commissioning and benchmarking tests validating its performance against gold standard data including a set of 6 irradiations. DLOS commissioning tests resulted in sub-mm isotropic spatial resolution (MTF >0.5 for frequencies of 1.5lp/mm) and a dynamic range of ˜60dB. Flood field uniformity was 10% and stable after 45minutes. Stray light proved to be small, due to telecentricity, but even the residual can be removed through deconvolution. Benchmarking tests showed the mean 3D passing gamma rate (3%, 3mm, 5% dose threshold) over the 6 benchmark data sets was 97.3% +/- 0.6% (range 96%-98%) scans totaling ˜10 minutes, indicating excellent ability to perform 3D dosimetry while improving the speed of

  9. A transportable optical lattice clock

    NASA Astrophysics Data System (ADS)

    Vogt, Stefan; Häfner, Sebastian; Grotti, Jacopo; Koller, Silvio; Al-Masoudi, Ali; Sterr, Uwe; Lisdat, Christian

    2016-06-01

    We present the experimental setup and first results of PTB's transportable 87Sr clock. It consists of a physics package, several compact laser breadboards, and a transportable high finesse cavity for the clock laser. A comparison of the transportable system with our stationary optical lattice clock yields an instability of 2.2 x 10-15 √s/τ for the transportable clock. The current fractional uncertainty of 1 × 10-15 is still limited by the not yet fully evaluated light shift from the free running optical lattice laser operated near the magic wavelength. We are currently improving our transportable system to reach an uncertainty at or below the 10-17 level, which will finaly be limited by the uncertainty in blackbody radiation shift correction.

  10. Species-specific optical lattices

    SciTech Connect

    LeBlanc, L. J.; Thywissen, J. H.

    2007-05-15

    We examine single-frequency optical schemes for species-selective trapping of ultracold alkali-metal atoms. Independently addressing the elements of a binary mixture enables the creation of an optical lattice for one atomic species with little or no effect on the other. We analyze a 'tune-in' scheme, using near-resonant detuning to create a strong potential for one specific element. A 'tune-out' scheme is also developed, in which the trapping wavelength is chosen to lie between two strong transitions of an alkali-metal atom such that the induced dipole moment is zero for that species but is nonzero for any other. We compare these schemes by examining the trap depths and heating rates associated with both. We find that the tune-in scheme is preferable for Li-Na, Li-K, and K-Na mixtures, while the tune-out scheme is preferable for Li-Cs, K-Rb, Rb-Cs, K-Cs, and {sup 39}K-{sup 40}K mixtures. Several applications of species-selective optical lattices are explored, including the creation of a lattice for a single species in the presence of a phononlike background, the tuning of relative effective mass, and the isothermal increase of phase-space density.

  11. New 3D optical digitizer for orthodontic applications

    NASA Astrophysics Data System (ADS)

    Canal Bienzobas, Fernando; Dios, Federico; Garcia-Mateos, Jorge; Rivera, Alejandro

    2002-05-01

    A new three-dimensional optical digitizer working with white light and high accuracy has been developed for applications in orthodontic diagnosis, to store and analyze data taken from plaster dental casts. The scanner consists basically of a triangulation device made of a CCD camera and an active light projector using Gray code and the phase stepping method to sample the surfaces under tests. Dense clouds of 3D points of the object's surface, related to the device's reference system, are generated, from which very exact measurements can be taken. This technique allows us to greatly improve the accuracy of results that previously were obtained by using mainly manual methods. Our system has been tested successfully on many different samples.

  12. Volumetric (3D) compressive sensing spectral domain optical coherence tomography

    PubMed Central

    Xu, Daguang; Huang, Yong; Kang, Jin U.

    2014-01-01

    In this work, we proposed a novel three-dimensional compressive sensing (CS) approach for spectral domain optical coherence tomography (SD OCT) volumetric image acquisition and reconstruction. Instead of taking a spectral volume whose size is the same as that of the volumetric image, our method uses a sub set of the original spectral volume that is under-sampled in all three dimensions, which reduces the amount of spectral measurements to less than 20% of that required by the Shan-non/Nyquist theory. The 3D image is recovered from the under-sampled spectral data dimension-by-dimension using the proposed three-step CS reconstruction strategy. Experimental results show that our method can significantly reduce the sampling rate required for a volumetric SD OCT image while preserving the image quality. PMID:25426320

  13. Volumetric (3D) compressive sensing spectral domain optical coherence tomography.

    PubMed

    Xu, Daguang; Huang, Yong; Kang, Jin U

    2014-11-01

    In this work, we proposed a novel three-dimensional compressive sensing (CS) approach for spectral domain optical coherence tomography (SD OCT) volumetric image acquisition and reconstruction. Instead of taking a spectral volume whose size is the same as that of the volumetric image, our method uses a sub set of the original spectral volume that is under-sampled in all three dimensions, which reduces the amount of spectral measurements to less than 20% of that required by the Shan-non/Nyquist theory. The 3D image is recovered from the under-sampled spectral data dimension-by-dimension using the proposed three-step CS reconstruction strategy. Experimental results show that our method can significantly reduce the sampling rate required for a volumetric SD OCT image while preserving the image quality.

  14. Orbital optical lattices with bosons

    NASA Astrophysics Data System (ADS)

    Kock, T.; Hippler, C.; Ewerbeck, A.; Hemmerich, A.

    2016-02-01

    This article provides a synopsis of our recent experimental work exploring Bose-Einstein condensation in metastable higher Bloch bands of optical lattices. Bipartite lattice geometries have allowed us to implement appropriate band structures, which meet three basic requirements: the existence of metastable excited states sufficiently protected from collisional band relaxation, a mechanism to excite the atoms initially prepared in the lowest band with moderate entropy increase, and the possibility of cross-dimensional tunneling dynamics, necessary to establish coherence along all lattice axes. A variety of bands can be selectively populated and a subsequent thermalization process leads to the formation of a condensate in the lowest energy state of the chosen band. As examples the 2nd, 4th and 7th bands in a bipartite square lattice are discussed. The geometry of the 2nd and 7th bands can be tuned such that two inequivalent energetically degenerate energy minima arise at the X ±-points at the edge of the 1st Brillouin zone. In this case even a small interaction energy is sufficient to lock the phase between the two condensation points such that a complex-valued chiral superfluid order parameter can emerge, which breaks time reversal symmetry. In the 4th band a condensate can be formed at the Γ-point in the center of the 1st Brillouin zone, which can be used to explore topologically protected band touching points. The new techniques to access orbital degrees of freedom in higher bands greatly extend the class of many-body scenarios that can be explored with bosons in optical lattices.

  15. Amoeboid migration mode adaption in quasi-3D spatial density gradients of varying lattice geometry

    NASA Astrophysics Data System (ADS)

    Gorelashvili, Mari; Emmert, Martin; Hodeck, Kai F.; Heinrich, Doris

    2014-07-01

    Cell migration processes are controlled by sensitive interaction with external cues such as topographic structures of the cell’s environment. Here, we present systematically controlled assays to investigate the specific effects of spatial density and local geometry of topographic structure on amoeboid migration of Dictyostelium discoideum cells. This is realized by well-controlled fabrication of quasi-3D pillar fields exhibiting a systematic variation of inter-pillar distance and pillar lattice geometry. By time-resolved local mean-squared displacement analysis of amoeboid migration, we can extract motility parameters in order to elucidate the details of amoeboid migration mechanisms and consolidate them in a two-state contact-controlled motility model, distinguishing directed and random phases. Specifically, we find that directed pillar-to-pillar runs are found preferably in high pillar density regions, and cells in directed motion states sense pillars as attractive topographic stimuli. In contrast, cell motion in random probing states is inhibited by high pillar density, where pillars act as obstacles for cell motion. In a gradient spatial density, these mechanisms lead to topographic guidance of cells, with a general trend towards a regime of inter-pillar spacing close to the cell diameter. In locally anisotropic pillar environments, cell migration is often found to be damped due to competing attraction by different pillars in close proximity and due to lack of other potential stimuli in the vicinity of the cell. Further, we demonstrate topographic cell guidance reflecting the lattice geometry of the quasi-3D environment by distinct preferences in migration direction. Our findings allow to specifically control amoeboid cell migration by purely topographic effects and thus, to induce active cell guidance. These tools hold prospects for medical applications like improved wound treatment, or invasion assays for immune cells.

  16. Optical 3D-coordinate measuring system using structured light

    NASA Astrophysics Data System (ADS)

    Schreiber, Wolfgang; Notni, Gunther; Kuehmstedt, Peter; Gerber, Joerg; Kowarschik, Richard M.

    1996-09-01

    The paper is aimed at the description of an optical shape measuring technique based on a consistent principle using fringe projection technique. We demonstrate a real 3D- coordinate measuring system where the sale of coordinates is given only by the illumination-structures. This method has the advantages that the aberration of the observing system and the depth-dependent imaging scale have no influence on the measuring accuracy and, moreover, the measurements are independent of the position of the camera with respect to the object under test. Furthermore, it is shown that the influence of specular effects of the surface on the measuring result can be eliminated. Moreover, we developed a very simple algorithm to calibrate the measuring system. The measuring examples show that a measuring accuracy of 10-4 (i.e. 10 micrometers ) within an object volume of 100 X 100 X 70 mm3 is achievable. Furthermore, it is demonstrated that the set of coordinate values can be processed in CNC- and CAD-systems.

  17. Cordless hand-held optical 3D sensor

    NASA Astrophysics Data System (ADS)

    Munkelt, Christoph; Bräuer-Burchardt, Christian; Kühmstedt, Peter; Schmidt, Ingo; Notni, Gunther

    2007-07-01

    A new mobile optical 3D measurement system using phase correlation based fringe projection technique will be presented. The sensor consist of a digital projection unit and two cameras in a stereo arrangement, whereby both are battery powered. The data transfer to a base station will be done via WLAN. This gives the possibility to use the system in complicate, remote measurement situations, which are typical in archaeology and architecture. In the measurement procedure the sensor will be hand-held by the user, illuminating the object with a sequence of less than 10 fringe patterns, within a time below 200 ms. This short sequence duration was achieved by a new approach, which combines the epipolar constraint with robust phase correlation utilizing a pre-calibrated sensor head, containing two cameras and a digital fringe projector. Furthermore, the system can be utilized to acquire the all around shape of objects by using the phasogrammetric approach with virtual land marks introduced by the authors 1, 2. This way no matching procedures or markers are necessary for the registration of multiple views, which makes the system very flexible in accomplishing different measurement tasks. The realized measurement field is approx. 100 mm up to 400 mm in diameter. The mobile character makes the measurement system useful for a wide range of applications in arts, architecture, archaeology and criminology, which will be shown in the paper.

  18. Development and validation of a 3D Lattice Boltzmann model for volcano aeroacoustics

    NASA Astrophysics Data System (ADS)

    Brogi, Federico; Bonadonna, Costanza; Ripepe, Maurizio; Chopard, Bastien; Malaspinas, Orestis; Latt, Jonas; Falcone, Jean-Luc

    2015-04-01

    Infrasound measurements have a great potential for the real time characterization of volcanic plume source parameters [Ripepe et al., 2013]. Nonetheless many shortcomings have been highlighted in the understanding of the infrasound monitoring. In particular, the application of the classical acoustic source models to volcanic explosive eruptions has shown to be challenging and a better knowledge of the link between the acoustic radiation and actual volcanic fluid dynamics processes is required. New insights into this subject could be given by the study of realistic aeroacoustic numerical simulations of a volcanic jet. Our work mainly focuses on developing and validating such numerical model to determine when and if classical model source theory can be applied to explain volcanic infrasound data. Lattice Boltzmann strategies (LB) provide the opportunity to develop an accurate, computationally fast, 3D physical model for a volcanic jet and wave propagation. In the field of aeroacoustic applications, dedicated LB schemes has been proven to have the low dispersion and dissipative properties needed for capturing the weak acoustic pressure fluctuations. However, when dealing with simulations of realistic flows, artificial boundaries are defined around the flow region. The reflected waves from these boundaries can have significant influence on the flow field and overwhelm the acoustic field of interest. A special absorbing boundary layer has been implemented in our model to suppress the reflected waves [Xu et al., 2013]. In addition, for highly multi-scale turbulent flows, such as volcanic plumes, the number of grid points needed to represent the smallest scales might become intractable and the most complicated physics happen only in small portions of the computational domain. The implementation of the grid refinement, in our model allow us to insert local finer grids only where is actually needed [Lagrava et al., 2012] and to increase the size of the computational domain

  19. Experimental generation of optical coherence lattices

    NASA Astrophysics Data System (ADS)

    Chen, Yahong; Ponomarenko, Sergey A.; Cai, Yangjian

    2016-08-01

    We report experimental generation and measurement of recently introduced optical coherence lattices. The presented optical coherence lattice realization technique hinges on a superposition of mutually uncorrelated partially coherent Schell-model beams with tailored coherence properties. We show theoretically that information can be encoded into and, in principle, recovered from the lattice degree of coherence. Our results can find applications to image transmission and optical encryption.

  20. Fractionalized topological defects in optical lattices

    NASA Astrophysics Data System (ADS)

    Zhang, Xing-Hai; Fan, Wen-Jun; Shi, Jin-Wei; Kou, Su-Peng

    2015-10-01

    Topological objects are interesting topics in various fields of physics ranging from condensed matter physics to the grand unified and superstring theories. Among those, ultracold atoms provide a playground to study the complex topological objects. In this paper we present a proposal to realize an optical lattice with stable fractionalized topological objects. In particular, we generate the fractionalized topological fluxes and fractionalized skyrmions on two-dimensional optical lattices and fractionalized monopoles on three-dimensional optical lattices. These results offer a new approach to study the quantum many-body systems on optical lattices of ultracold quantum gases with controllable topological defects, including dislocations, topological fluxes and monopoles.

  1. Lattice-induced nonadiabatic frequency shifts in optical lattice clocks

    SciTech Connect

    Beloy, K.

    2010-09-15

    We consider the frequency shift in optical lattice clocks which arises from the coupling of the electronic motion to the atomic motion within the lattice. For the simplest of three-dimensional lattice geometries this coupling is shown to affect only clocks based on blue-detuned lattices. We have estimated the size of this shift for the prospective strontium lattice clock operating at the 390-nm blue-detuned magic wavelength. The resulting fractional frequency shift is found to be on the order of 10{sup -18} and is largely overshadowed by the electric quadrupole shift. For lattice clocks based on more complex geometries or other atomic systems, this shift could potentially be a limiting factor in clock accuracy.

  2. Creation of quantum-degenerate gases of ytterbium in a compact 2D-/3D-magneto-optical trap setup

    SciTech Connect

    Doerscher, Soeren; Thobe, Alexander; Hundt, Bastian; Kochanke, Andre; Le Targat, Rodolphe; Windpassinger, Patrick; Becker, Christoph; Sengstock, Klaus

    2013-04-15

    We report on the first experimental setup based on a 2D-/3D-magneto-optical trap (MOT) scheme to create both Bose-Einstein condensates and degenerate Fermi gases of several ytterbium isotopes. Our setup does not require a Zeeman slower and offers the flexibility to simultaneously produce ultracold samples of other atomic species. Furthermore, the extraordinary optical access favors future experiments in optical lattices. A 2D-MOT on the strong {sup 1}S{sub 0}{yields}{sup 1}P{sub 1} transition captures ytterbium directly from a dispenser of atoms and loads a 3D-MOT on the narrow {sup 1}S{sub 0}{yields}{sup 3}P{sub 1} intercombination transition. Subsequently, atoms are transferred to a crossed optical dipole trap and cooled evaporatively to quantum degeneracy.

  3. Realizing Parafermions in Optical Lattices

    NASA Astrophysics Data System (ADS)

    Liu, Fangli; Gorshkov, Alexey

    2016-05-01

    Parafermions, which are the fractional versions of Majorana fermions, possess more exotic braiding statistics than Majorana fermions and are therefore more powerful from the point of view of topological quantum computing. We propose a scheme to realize parafermionic zero modes in optical lattices, without the use of superconductive paring. With the help of laser assisted tunneling and on-site interactions, two layers of ultracold atoms in distinct hyperfine states can be engineered to host +/- 1 / m fractional quantum Hall states. We then introduce a finite-extent potential barrier that pierces both layers - this gives rise to two counter-propagating edge states that sit on top of each other. Finally, laser induced coupling is used to introduce backscattering between the two edge states and to gap them out. We show that the resulting defects give rise to the topological degeneracy associated with parafermions. We also discuss methods for preparation and detection.

  4. Optical lattices with micromechanical mirrors

    SciTech Connect

    Hammerer, K.; Stannigel, K.; Genes, C.; Zoller, P.; Treutlein, P.; Camerer, S.; Hunger, D.; Haensch, T. W.

    2010-08-15

    We investigate a setup where a cloud of atoms is trapped in an optical lattice potential of a standing-wave laser field which is created by retroreflection on a micromembrane. The membrane vibrations itself realize a quantum mechanical degree of freedom. We show that the center-of-mass mode of atoms can be coupled to the vibrational mode of the membrane in free space. Via laser cooling of atoms a significant sympathetic cooling effect on the membrane vibrations can be achieved. Switching off laser cooling brings the system close to a regime of strong coherent coupling. This setup provides a controllable segregation between the cooling and coherent dynamics regimes, and allows one to keep the membrane in a cryogenic environment and atoms at a distance in a vacuum chamber.

  5. Air-structured optical fiber drawn from a 3D-printed preform.

    PubMed

    Cook, Kevin; Canning, John; Leon-Saval, Sergio; Reid, Zane; Hossain, Md Arafat; Comatti, Jade-Edouard; Luo, Yanhua; Peng, Gang-Ding

    2015-09-01

    A structured optical fiber is drawn from a 3D-printed structured preform. Preforms containing a single ring of holes around the core are fabricated using filament made from a modified butadiene polymer. More broadly, 3D printers capable of processing soft glasses, silica, and other materials are likely to come on line in the not-so-distant future. 3D printing of optical preforms signals a new milestone in optical fiber manufacture.

  6. Lattice Boltzmann Model of 3D Multiphase Flow in Artery Bifurcation Aneurysm Problem.

    PubMed

    Abas, Aizat; Mokhtar, N Hafizah; Ishak, M H H; Abdullah, M Z; Ho Tian, Ang

    2016-01-01

    This paper simulates and predicts the laminar flow inside the 3D aneurysm geometry, since the hemodynamic situation in the blood vessels is difficult to determine and visualize using standard imaging techniques, for example, magnetic resonance imaging (MRI). Three different types of Lattice Boltzmann (LB) models are computed, namely, single relaxation time (SRT), multiple relaxation time (MRT), and regularized BGK models. The results obtained using these different versions of the LB-based code will then be validated with ANSYS FLUENT, a commercially available finite volume- (FV-) based CFD solver. The simulated flow profiles that include velocity, pressure, and wall shear stress (WSS) are then compared between the two solvers. The predicted outcomes show that all the LB models are comparable and in good agreement with the FVM solver for complex blood flow simulation. The findings also show minor differences in their WSS profiles. The performance of the parallel implementation for each solver is also included and discussed in this paper. In terms of parallelization, it was shown that LBM-based code performed better in terms of the computation time required. PMID:27239221

  7. Lattice Boltzmann Model of 3D Multiphase Flow in Artery Bifurcation Aneurysm Problem

    PubMed Central

    Abas, Aizat; Mokhtar, N. Hafizah; Ishak, M. H. H.; Abdullah, M. Z.; Ho Tian, Ang

    2016-01-01

    This paper simulates and predicts the laminar flow inside the 3D aneurysm geometry, since the hemodynamic situation in the blood vessels is difficult to determine and visualize using standard imaging techniques, for example, magnetic resonance imaging (MRI). Three different types of Lattice Boltzmann (LB) models are computed, namely, single relaxation time (SRT), multiple relaxation time (MRT), and regularized BGK models. The results obtained using these different versions of the LB-based code will then be validated with ANSYS FLUENT, a commercially available finite volume- (FV-) based CFD solver. The simulated flow profiles that include velocity, pressure, and wall shear stress (WSS) are then compared between the two solvers. The predicted outcomes show that all the LB models are comparable and in good agreement with the FVM solver for complex blood flow simulation. The findings also show minor differences in their WSS profiles. The performance of the parallel implementation for each solver is also included and discussed in this paper. In terms of parallelization, it was shown that LBM-based code performed better in terms of the computation time required. PMID:27239221

  8. Application issues when using optical 3D systems in place of CMMs

    NASA Astrophysics Data System (ADS)

    Harding, Kevin G.

    2002-02-01

    A primary application of optical 3D measurement systems has been in the replacement of mechanical coordinate measurement machines (CMMs). The advantage of optical 3D systems is typically greater speed and flexibility of operation over even the best CMMs. However, the two technologies are not necessarily one to one replacements, requiring new methods of use and in general proof of performance. This paper will present specific data that highlights the differences between CMMs and optical 3D systems and suggests a method to properly achieve CMM compatible results with an optical 3D system and the problems seen in this study.

  9. Design of 3D isotropic metamaterial device using smart transformation optics.

    PubMed

    Shin, Dongheok; Kim, Junhyun; Yoo, Do-Sik; Kim, Kyoungsik

    2015-08-24

    We report here a design method for a 3 dimensional (3D) isotropic transformation optical device using smart transformation optics. Inspired by solid mechanics, smart transformation optics regards a transformation optical medium as an elastic solid and deformations as coordinate transformations. Further developing from our previous work on 2D smart transformation optics, we introduce a method of 3D smart transformation optics to design 3D transformation optical devices by maintaining isotropic materials properties for all types of polarizations imposing free or nearly free boundary conditions. Due to the material isotropy, it is possible to fabricate such devices with structural metamaterials made purely of common dielectric materials. In conclusion, the practical importance of the method reported here lies in the fact that it enables us to fabricate, without difficulty, arbitrarily shaped 3D devices with existing 3D printing technology.

  10. Design of 3D isotropic metamaterial device using smart transformation optics.

    PubMed

    Shin, Dongheok; Kim, Junhyun; Yoo, Do-Sik; Kim, Kyoungsik

    2015-08-24

    We report here a design method for a 3 dimensional (3D) isotropic transformation optical device using smart transformation optics. Inspired by solid mechanics, smart transformation optics regards a transformation optical medium as an elastic solid and deformations as coordinate transformations. Further developing from our previous work on 2D smart transformation optics, we introduce a method of 3D smart transformation optics to design 3D transformation optical devices by maintaining isotropic materials properties for all types of polarizations imposing free or nearly free boundary conditions. Due to the material isotropy, it is possible to fabricate such devices with structural metamaterials made purely of common dielectric materials. In conclusion, the practical importance of the method reported here lies in the fact that it enables us to fabricate, without difficulty, arbitrarily shaped 3D devices with existing 3D printing technology. PMID:26368165

  11. Application of an optical 3D sensor for automated disassembling

    NASA Astrophysics Data System (ADS)

    Knackfuss, Peter; Schmidt, Achim

    1996-08-01

    The application of an active vision 3D sensor is described for the development and control of an autonomous intelligent robot cell for the disassembling of end-of-life-vehicle components. The research and development work was done concurrently by three European development teams at different locations. During this phase, the virtual environment was distributed on the local development platforms of these teams. Intermediate development results and 3D sensor data were exchanged through network communication to be mutually tested and verified. The physical environment of the disassembling cell demonstrator and its sensor systems is currently being integrated at the BIBA institute.

  12. Trapping Rydberg Atoms in an Optical Lattice

    NASA Astrophysics Data System (ADS)

    Anderson, Sarah E.

    2012-06-01

    Optical lattice traps for Rydberg atoms are of interest in advanced science and in practical applications. After a brief discussion of these areas of interest, I will review some basics of optical Rydberg-atom trapping. The trapping potential experienced by a Rydberg atom in an optical lattice is given by the spatial average of the free-electron ponderomotive energy weighted by the Rydberg electron's probability distribution. I will then present experimental results on the trapping of ^85Rb Rydberg atoms in a one-dimensional ponderomotive optical lattice (wavelength 1064 nm). The principal methods employed to study the lattice performance are microwave spectroscopy, which is used to measure the lattice's trapping efficiency, and photo-ionization, which is used to measure the dwell time of the atoms in the lattice. I have achieved a 90% trapping efficiency for ^85Rb 50S atoms by inverting the lattice immediately after laser excitation of ground-state atoms into Rydberg states. I have characterized the dwell time of the atoms in the lattice using photo-ionization of 50D5/2 atoms. In continued work, I have explored the dependence of the Rydberg-atom trapping potential on the angular portion of the atomic wavefunction. Distinct angular states exhibit different trapping behavior in the optical lattice, depending on how their wavefunctions are oriented relative to the lattice planes. Specifically, I have measured the lattice potential depth of sublevels of ^85Rb nD atoms (50<=n<=65) in a one-dimensional optical lattice with a transverse DC electric field. The trapping behavior varies substantially for the various angular sublevels, in agreement with theory. The talk will conclude with an outlook into planned experiments.

  13. Subwavelength Lattice Optics by Evolutionary Design

    PubMed Central

    2015-01-01

    This paper describes a new class of structured optical materials—lattice opto-materials—that can manipulate the flow of visible light into a wide range of three-dimensional profiles using evolutionary design principles. Lattice opto-materials are based on the discretization of a surface into a two-dimensional (2D) subwavelength lattice whose individual lattice sites can be controlled to achieve a programmed optical response. To access a desired optical property, we designed a lattice evolutionary algorithm that includes and optimizes contributions from every element in the lattice. Lattice opto-materials can exhibit simple properties, such as on- and off-axis focusing, and can also concentrate light into multiple, discrete spots. We expanded the unit cell shapes of the lattice to achieve distinct, polarization-dependent optical responses from the same 2D patterned substrate. Finally, these lattice opto-materials can also be combined into architectures that resemble a new type of compound flat lens. PMID:25380062

  14. Optical turbulence above mountains seen in 3D

    NASA Astrophysics Data System (ADS)

    Els, S. G.; Vogiatzis, K.; Otárola, A.; Riddle, R.; Schöck, M.; Skidmore, W.; Travouillon, T.

    2010-07-01

    Atmospheric optical turbulence is the main driver of wavefront distortions which affect optical telescope performance. Therefore, many techniques have been developed to measure the optical turbulence strength along the line of sight. Based on data collected with the MASS (Multi Aperture Scintillation Sensor), we show that a large sample of such measurements can be used to assess the average three dimensional turbulence distribution above ground. The use of, and a more sophisticated instrumental setup for, such turbulence tomography will be discussed.

  15. Cold atoms in a rotating optical lattice

    NASA Astrophysics Data System (ADS)

    Foot, Christopher J.

    2009-05-01

    We have demonstrated a novel experimental arrangement which can rotate a two-dimensional optical lattice at frequencies up to several kilohertz. Our arrangement also allows the periodicity of the optical lattice to be varied dynamically, producing a 2D ``accordion lattice'' [1]. The angles of the laser beams are controlled by acousto-optic deflectors and this allows smooth changes with little heating of the trapped cold (rubidium) atoms. We have loaded a BEC into lattices with periodicities ranging from 1.8μm to 18μm, observing the collapse and revival of the diffraction orders of the condensate over a large range of lattice parameters as recently reported by a group in NIST [2]. We have also imaged atoms in situ in a 2D lattice over a range of lattice periodicities. Ultracold atoms in a rotating lattice can be used for the direct quantum simulation of strongly correlated systems under large effective magnetic fields, i.e. the Hamiltonian of the atoms in the rotating frame resembles that of a charged particle in a strong magnetic field. In the future, we plan to use this to investigate a range of phenomena such as the analogue of the fractional quantum Hall effect. [4pt] [1] R. A. Williams, J. D. Pillet, S. Al-Assam, B. Fletcher, M. Shotter, and C. J. Foot, ``Dynamic optical lattices: two-dimensional rotating and accordion lattices for ultracold atoms,'' Opt. Express 16, 16977-16983 (2008) [0pt] [2] J. H. Huckans, I. B. Spielman, B. Laburthe Tolra, W. D. Phillips, and J. V. Porto, Quantum and Classical Dynamics of a BEC in a Large-Period Optical Lattice, arXiv:0901.1386v1

  16. Test target for characterizing 3D resolution of optical coherence tomography

    NASA Astrophysics Data System (ADS)

    Hu, Zhixiong; Hao, Bingtao; Liu, Wenli; Hong, Baoyu; Li, Jiao

    2014-12-01

    Optical coherence tomography (OCT) is a non-invasive 3D imaging technology which has been applied or investigated in many diagnostic fields including ophthalmology, dermatology, dentistry, cardiovasology, endoscopy, brain imaging and so on. Optical resolution is an important characteristic that can describe the quality and utility of an image acquiring system. We employ 3D printing technology to design and fabricate a test target for characterizing 3D resolution of optical coherence tomography. The test target which mimics USAF 1951 test chart was produced with photopolymer. By measuring the 3D test target, axial resolution as well as lateral resolution of a spectral domain OCT system was evaluated. For comparison, conventional microscope and surface profiler were employed to characterize the 3D test targets. The results demonstrate that the 3D resolution test targets have the potential of qualitatively and quantitatively validating the performance of OCT systems.

  17. Optical vortex array in spatially varying lattice

    NASA Astrophysics Data System (ADS)

    Kapoor, Amit; Kumar, Manish; Senthilkumaran, P.; Joseph, Joby

    2016-04-01

    We present an experimental method based on a modified multiple beam interference approach to generate an optical vortex array arranged in a spatially varying lattice. This method involves two steps which are: numerical synthesis of a consistent phase mask by using two-dimensional integrated phase gradient calculations and experimental implementation of produced phase mask by utilizing a phase only spatial light modulator in an optical 4f Fourier filtering setup. This method enables an independent variation of the orientation and period of the vortex lattice. As working examples, we provide the experimental demonstration of various spatially variant optical vortex lattices. We further confirm the existence of optical vortices by formation of fork fringes. Such lattices may find applications in size dependent trapping, sorting, manipulation and photonic crystals.

  18. Focusing optics of a parallel beam CCD optical tomography apparatus for 3D radiation gel dosimetry.

    PubMed

    Krstajić, Nikola; Doran, Simon J

    2006-04-21

    Optical tomography of gel dosimeters is a promising and cost-effective avenue for quality control of radiotherapy treatments such as intensity-modulated radiotherapy (IMRT). Systems based on a laser coupled to a photodiode have so far shown the best results within the context of optical scanning of radiosensitive gels, but are very slow ( approximately 9 min per slice) and poorly suited to measurements that require many slices. Here, we describe a fast, three-dimensional (3D) optical computed tomography (optical-CT) apparatus, based on a broad, collimated beam, obtained from a high power LED and detected by a charged coupled detector (CCD). The main advantages of such a system are (i) an acquisition speed approximately two orders of magnitude higher than a laser-based system when 3D data are required, and (ii) a greater simplicity of design. This paper advances our previous work by introducing a new design of focusing optics, which take information from a suitably positioned focal plane and project an image onto the CCD. An analysis of the ray optics is presented, which explains the roles of telecentricity, focusing, acceptance angle and depth-of-field (DOF) in the formation of projections. A discussion of the approximation involved in measuring the line integrals required for filtered backprojection reconstruction is given. Experimental results demonstrate (i) the effect on projections of changing the position of the focal plane of the apparatus, (ii) how to measure the acceptance angle of the optics, and (iii) the ability of the new scanner to image both absorbing and scattering gel phantoms. The quality of reconstructed images is very promising and suggests that the new apparatus may be useful in a clinical setting for fast and accurate 3D dosimetry. PMID:16585845

  19. Focusing optics of a parallel beam CCD optical tomography apparatus for 3D radiation gel dosimetry

    NASA Astrophysics Data System (ADS)

    Krstajic, Nikola; Doran, Simon J.

    2006-04-01

    Optical tomography of gel dosimeters is a promising and cost-effective avenue for quality control of radiotherapy treatments such as intensity-modulated radiotherapy (IMRT). Systems based on a laser coupled to a photodiode have so far shown the best results within the context of optical scanning of radiosensitive gels, but are very slow (~9 min per slice) and poorly suited to measurements that require many slices. Here, we describe a fast, three-dimensional (3D) optical computed tomography (optical-CT) apparatus, based on a broad, collimated beam, obtained from a high power LED and detected by a charged coupled detector (CCD). The main advantages of such a system are (i) an acquisition speed approximately two orders of magnitude higher than a laser-based system when 3D data are required, and (ii) a greater simplicity of design. This paper advances our previous work by introducing a new design of focusing optics, which take information from a suitably positioned focal plane and project an image onto the CCD. An analysis of the ray optics is presented, which explains the roles of telecentricity, focusing, acceptance angle and depth-of-field (DOF) in the formation of projections. A discussion of the approximation involved in measuring the line integrals required for filtered backprojection reconstruction is given. Experimental results demonstrate (i) the effect on projections of changing the position of the focal plane of the apparatus, (ii) how to measure the acceptance angle of the optics, and (iii) the ability of the new scanner to image both absorbing and scattering gel phantoms. The quality of reconstructed images is very promising and suggests that the new apparatus may be useful in a clinical setting for fast and accurate 3D dosimetry.

  20. Bloch oscillations in optical dissipative lattices.

    PubMed

    Efremidis, Nikolaos K; Christodoulides, Demetrios N

    2004-11-01

    We show that Bloch oscillations are possible in dissipative optical waveguide lattices with a linearly varying propagation constant. These oscillations occur in spite of the fact that the Bloch wave packet experiences coupling gain and (or) loss. Experimentally, this process can be observed in different settings, such as in laser arrays and lattices of semiconductor optical amplifiers. In addition, we demonstrate that these systems can suppress instabilities arising from preferential mode noise growth.

  1. Atomic Fermi gases in optical lattices

    SciTech Connect

    Modugno, G.; De Mirandes, E.; Ferlando, F.; Ott, H.; Roati, G.; Inguscio, M.

    2005-05-05

    We report on the first experiments with atomic Fermi gases in optical lattices. We have studied the properties of non interacting fermions and of an interacting boson-fermion mixture in a 1D lattice in presence of additional linear or harmonic potentials. These systems have allowed to study for the first time the fundamental quantum transport properties of a perfect crystal and to confirm the role of interactions in real crystals. We have found that the combination of Fermi gases and optical lattices can also have important applications, such as high-resolution force sensing.

  2. Trapping Rydberg Atoms in an Optical Lattice

    SciTech Connect

    Anderson, S. E.; Younge, K. C.; Raithel, G.

    2011-12-23

    Rubidium Rydberg atoms are laser excited and subsequently trapped in a one-dimensional optical lattice (wavelength 1064 nm). Efficient trapping is achieved by a lattice inversion immediately after laser excitation using an electro-optic technique. The trapping efficiency is probed via analysis of the trap-induced shift of the two-photon microwave transition 50S{yields}51S. The inversion technique allows us to reach a trapping efficiency of 90%. The dependence of the efficiency on the timing of the lattice inversion and on the trap laser power is studied. The dwell time of 50D{sub 5/2} Rydberg atoms in the lattice is analyzed using lattice-induced photoionization.

  3. 3D reconstruction of SEM images by use of optical photogrammetry software.

    PubMed

    Eulitz, Mona; Reiss, Gebhard

    2015-08-01

    Reconstruction of the three-dimensional (3D) surface of an object to be examined is widely used for structure analysis in science and many biological questions require information about their true 3D structure. For Scanning Electron Microscopy (SEM) there has been no efficient non-destructive solution for reconstruction of the surface morphology to date. The well-known method of recording stereo pair images generates a 3D stereoscope reconstruction of a section, but not of the complete sample surface. We present a simple and non-destructive method of 3D surface reconstruction from SEM samples based on the principles of optical close range photogrammetry. In optical close range photogrammetry a series of overlapping photos is used to generate a 3D model of the surface of an object. We adapted this method to the special SEM requirements. Instead of moving a detector around the object, the object itself was rotated. A series of overlapping photos was stitched and converted into a 3D model using the software commonly used for optical photogrammetry. A rabbit kidney glomerulus was used to demonstrate the workflow of this adaption. The reconstruction produced a realistic and high-resolution 3D mesh model of the glomerular surface. The study showed that SEM micrographs are suitable for 3D reconstruction by optical photogrammetry. This new approach is a simple and useful method of 3D surface reconstruction and suitable for various applications in research and teaching.

  4. Colloquium: Physics of optical lattice clocks

    SciTech Connect

    Derevianko, Andrei; Katori, Hidetoshi

    2011-04-01

    Recently invented and demonstrated optical lattice clocks hold great promise for improving the precision of modern time keeping. These clocks aim at the 10{sup -18} fractional accuracy, which translates into a clock that would neither lose nor gain a fraction of a second over an estimated age of the Universe. In these clocks, millions of atoms are trapped and interrogated simultaneously, dramatically improving clock stability. Here the principles of operation of these clocks are discussed and, in particular, a novel concept of magic trapping of atoms in optical lattices. Recently proposed microwave lattice clocks are also highlights and several applications that employ the optical lattice clocks as a platform for precision measurements and quantum information processing.

  5. 3-D Adaptive Sparsity Based Image Compression with Applications to Optical Coherence Tomography

    PubMed Central

    Fang, Leyuan; Li, Shutao; Kang, Xudong; Izatt, Joseph A.; Farsiu, Sina

    2015-01-01

    We present a novel general-purpose compression method for tomographic images, termed 3D adaptive sparse representation based compression (3D-ASRC). In this paper, we focus on applications of 3D-ASRC for the compression of ophthalmic 3D optical coherence tomography (OCT) images. The 3D-ASRC algorithm exploits correlations among adjacent OCT images to improve compression performance, yet is sensitive to preserving their differences. Due to the inherent denoising mechanism of the sparsity based 3D-ASRC, the quality of the compressed images are often better than the raw images they are based on. Experiments on clinical-grade retinal OCT images demonstrate the superiority of the proposed 3D-ASRC over other well-known compression methods. PMID:25561591

  6. Light sheet adaptive optics microscope for 3D live imaging

    NASA Astrophysics Data System (ADS)

    Bourgenot, C.; Taylor, J. M.; Saunter, C. D.; Girkin, J. M.; Love, G. D.

    2013-02-01

    We report on the incorporation of adaptive optics (AO) into the imaging arm of a selective plane illumination microscope (SPIM). SPIM has recently emerged as an important tool for life science research due to its ability to deliver high-speed, optically sectioned, time-lapse microscope images from deep within in vivo selected samples. SPIM provides a very interesting system for the incorporation of AO as the illumination and imaging paths are decoupled and AO may be useful in both paths. In this paper, we will report the use of AO applied to the imaging path of a SPIM, demonstrating significant improvement in image quality of a live GFP-labeled transgenic zebrafish embryo heart using a modal, wavefront sensorless approach and a heart synchronization method. These experimental results are linked to a computational model showing that significant aberrations are produced by the tube holding the sample in addition to the aberration from the biological sample itself.

  7. Towards a 3-D Magneto-Optical Trap for Molecules

    NASA Astrophysics Data System (ADS)

    Collopy, Alejandra; Hummon, Matthew; Yeo, Mark; Stuhl, Benjamin; Hemmerling, Boerge; Drayna, Garrett; Chae, Eunmi; Ravi, Aakash; Lu, Hsin-I.; Doyle, John; Ye, Jun

    2013-05-01

    As the magneto-optical trap revolutionized atomic physics, we anticipate the molecular counterpart to open doors to unexplored molecular physics, including ultra-cold chemistry. While molecules possess more complex structure than atoms, quasi-cycling cooling transitions are still attainable in a variety of species, including the polar molecule YO. In order to remix dark states, we RF modulate the polarization of the light in our trap. In order to maintain a restoring force, we modulate the orientation of our magnetic fields in phase with the light using LC resonant in-vacuum magnetic coils. We demonstrate magneto-optical trapping in two dimensions for YO, and present progress towards a three dimensional implementation of a MOT loaded from a two-stage buffer gas cell source. We acknowledge support from the AFOSR (MURI), DOE, NIST and the NSF.

  8. Subtractive 3D printing of optically active diamond structures.

    PubMed

    Martin, Aiden A; Toth, Milos; Aharonovich, Igor

    2014-05-21

    Controlled fabrication of semiconductor nanostructures is an essential step in engineering of high performance photonic and optoelectronic devices. Diamond in particular has recently attracted considerable attention as a promising platform for quantum technologies, photonics and high resolution sensing applications. Here we demonstrate the fabrication of optically active, functional diamond structures using gas-mediated electron beam induced etching (EBIE). The technique achieves dry chemical etching at room temperature through the dissociation of surface-adsorbed H2O molecules by energetic electrons in a water vapor environment. Parallel processing is possible by electron flood exposure and the use of an etch mask, while high resolution, mask-free, iterative editing is demonstrated by direct write etching of inclined facets of diamond microparticles. The realized structures demonstrate the potential of EBIE for the fabrication of optically active structures in diamond.

  9. Weyl points in three-dimensional optical lattices: synthetic magnetic monopoles in momentum space

    NASA Astrophysics Data System (ADS)

    Buljan, Hrvoje; Dubcek, Tena; Kennedy, Colin; Lu, Ling; Ketterle, Wolfgang; Soljacic, Marin

    2015-05-01

    We show that Hamiltonians with Weyl points can be realized for ultracold atoms using laser-assisted tunneling in three-dimensional (3D) optical lattices. Weyl points are synthetic magnetic monopoles that exhibit a robust, 3D linear dispersion (e.g., see). They are associated with many interesting topological states of matter, such as Weyl semimetals and chiral Weyl fermions. However, Weyl points have yet to be experimentally observed in any system. We show that this elusive goal is well-within experimental reach with an extension of the techniques recently used to obtain the Harper Hamiltonian. We propose using laser assisted tunneling to create a 3D optical lattice, with specifically designed hopping between lattice sites that breaks inversion symmetry. The design leads to creation of four Weyl points in the Brillouin zone of the lattice, which are verified to be monopoles of the synthetic magnetic field. Supported by the Unity through Knowledge Fund (Grant 5/13).

  10. 3D parameter reconstruction in hyperspectral diffuse optical tomography

    NASA Astrophysics Data System (ADS)

    Saibaba, Arvind K.; Krishnamurthy, Nishanth; Anderson, Pamela G.; Kainerstorfer, Jana M.; Sassaroli, Angelo; Miller, Eric L.; Fantini, Sergio; Kilmer, Misha E.

    2015-03-01

    The imaging of shape perturbation and chromophore concentration using Diffuse Optical Tomography (DOT) data can be mathematically described as an ill-posed and non-linear inverse problem. The reconstruction algorithm for hyperspectral data using a linearized Born model is prohibitively expensive, both in terms of computation and memory. We model the shape of the perturbation using parametric level-set approach (PaLS). We discuss novel computational strategies for reducing the computational cost based on a Krylov subspace approach for parameteric linear systems and a compression strategy for the parameter-to-observation map. We will demonstrate the validity of our approach by comparison with experiments.

  11. DESIGN OF THE RCMS LATTICE OPTICS.

    SciTech Connect

    CARDONA,J.; KEWISCH,J.; PEGGS,S.

    2002-06-02

    THE RAPID CYCLING MEDICAL SYNCHROTRON (RCMS) IS DESIGNED TO BE A VERY LIGHT AND INEXPENSIVE ACCELERATOR. THIS IS POSSIBLE DUE TO THE SMALL BEAM SIZE THAT HAS BEEN CHOSEN EARLY DURING THE DESIGN STAGE. THIS CHOICE HAS IMPLICATIONS IN THE DESIGN OF THE LATTICE OPTICS. IN THIS PAPER, WE PRESENT AN OVERVIEW OF THE RCMS OPTICS LATTICE, THE KIND OF MAGNETS TO BE USED AND ALSO A DESCRIPTION OF A SPECIAL OPTIC MODULE THAT MATCHES THE ROTATING GANTRY WITH THE REST OF THE FIXED ACCELERATOR. TECHNIQUESDEVELOPED TO WIN ADDITIONAL SPACE BETWEEN QUADRUPOLES WITHOUT DISTRUBING BETA FUNCTIONS ARE ALSO PRESENTED.

  12. Snapshot 3D optical coherence tomography system using image mappingspectrometry

    PubMed Central

    Nguyen, Thuc-Uyen; Pierce, Mark C; Higgins, Laura; Tkaczyk, Tomasz S

    2013-01-01

    A snapshot 3-Dimensional Optical Coherence Tomography system was developed using Image MappingSpectrometry. This system can give depth information (Z) at different spatial positions (XY) withinone camera integration time to potentially reduce motion artifact and enhance throughput. Thecurrent (x,y,λ) datacube of (85×356×117) provides a 3Dvisualization of sample with 400 μm depth and 13.4μm in transverse resolution. Axial resolution of 16.0μm can also be achieved in this proof-of-concept system. We present ananalysis of the theoretical constraints which will guide development of future systems withincreased imaging depth and improved axial and lateral resolutions. PMID:23736629

  13. 3D Printing Optical Engine for Controlling Material Microstructure

    NASA Astrophysics Data System (ADS)

    Huang, Wei-Chin; Chang, Kuang-Po; Wu, Ping-Han; Wu, Chih-Hsien; Lin, Ching-Chih; Chuang, Chuan-Sheng; Lin, De-Yau; Liu, Sung-Ho; Horng, Ji-Bin; Tsau, Fang-Hei

    Controlling the cooling rate of alloy during melting and resolidification is the most commonly used method for varying the material microstructure and consequently the resuling property. However, the cooling rate of a selective laser melting (SLM) production is restricted by a preset optimal parameter of a good dense product. The head room for locally manipulating material property in a process is marginal. In this study, we invent an Optical Engine for locally controlling material microstructure in a SLM process. It develops an invovative method to control and adjust thermal history of the solidification process to gain desired material microstucture and consequently drastically improving the quality. Process parameters selected locally for specific materials requirement according to designed characteristics by using thermal dynamic principles of solidification process. It utilize a technique of complex laser beam shape of adaptive irradiation profile to permit local control of material characteristics as desired. This technology could be useful for industrial application of medical implant, aerospace and automobile industries.

  14. An optical real-time 3D measurement for analysis of facial shape and movement

    NASA Astrophysics Data System (ADS)

    Zhang, Qican; Su, Xianyu; Chen, Wenjing; Cao, Yiping; Xiang, Liqun

    2003-12-01

    Optical non-contact 3-D shape measurement provides a novel and useful tool for analysis of facial shape and movement in presurgical and postsurgical regular check. In this article we present a system, which allows a precise 3-D visualization of the patient's facial before and after craniofacial surgery. We discussed, in this paper, the real time 3-D image capture, processing and the 3-D phase unwrapping method to recover complex shape deformation when the movement of the mouth. The result of real-time measurement for facial shape and movement will be helpful for the more ideal effect in plastic surgery.

  15. Minimizing nonadiabaticities in optical-lattice loading

    NASA Astrophysics Data System (ADS)

    Dolfi, Michele; Kantian, Adrian; Bauer, Bela; Troyer, Matthias

    2015-03-01

    In the quest to reach lower temperatures of ultracold gases in optical-lattice experiments, nonadiabaticities during lattice loading represent one of the limiting factors that prevent the same low temperatures being reached as in experiments without lattices. Simulating the loading of a bosonic quantum gas into a one-dimensional optical lattice with and without a trap, we find that the redistribution of atomic density inside a global confining potential is by far the dominant source of heating. Based on these results we propose adjusting the trapping potential during loading to minimize changes to the density distribution. Our simulations confirm that a very simple linear interpolation of the trapping potential during loading already significantly decreases the heating of a quantum gas, and we discuss how loading protocols minimizing density redistributions can be designed.

  16. The optical potential on the lattice

    DOE PAGES

    Agadjanov, Dimitri; Doring, Michael; Mai, Maxim; MeiBner, Ulf -G.; Rusetsky, Akaki

    2016-06-08

    The extraction of hadron-hadron scattering parameters from lattice data by using the Luscher approach becomes increasingly complicated in the presence of inelastic channels. We propose a method for the direct extraction of the complex hadron-hadron optical potential on the lattice, which does not require the use of the multi-channel Luscher formalism. Furthermore, this method is applicable without modifications if some inelastic channels contain three or more particles.

  17. Dual FIB-SEM 3D imaging and lattice boltzmann modeling of porosimetry and multiphase flow in chalk.

    SciTech Connect

    Rinehart, Alex; Petrusak, Robin; Heath, Jason E.; Dewers, Thomas A.; Yoon, Hongkyu

    2010-12-01

    Mercury intrusion porosimetry (MIP) is an often-applied technique for determining pore throat distributions and seal analysis of fine-grained rocks. Due to closure effects, potential pore collapse, and complex pore network topologies, MIP data interpretation can be ambiguous, and often biased toward smaller pores in the distribution. We apply 3D imaging techniques and lattice-Boltzmann modeling in interpreting MIP data for samples of the Cretaceous Selma Group Chalk. In the Mississippi Interior Salt Basin, the Selma Chalk is the apparent seal for oil and gas fields in the underlying Eutaw Fm., and, where unfractured, the Selma Chalk is one of the regional-scale seals identified by the Southeast Regional Carbon Sequestration Partnership for CO2 injection sites. Dual focused ion - scanning electron beam and laser scanning confocal microscopy methods are used for 3D imaging of nanometer-to-micron scale microcrack and pore distributions in the Selma Chalk. A combination of image analysis software is used to obtain geometric pore body and throat distributions and other topological properties, which are compared to MIP results. 3D data sets of pore-microfracture networks are used in Lattice Boltzmann simulations of drainage (wetting fluid displaced by non-wetting fluid via the Shan-Chen algorithm), which in turn are used to model MIP procedures. Results are used in interpreting MIP results, understanding microfracture-matrix interaction during multiphase flow, and seal analysis for underground CO2 storage.

  18. Wilson fermions and axion electrodynamics in optical lattices.

    PubMed

    Bermudez, A; Mazza, L; Rizzi, M; Goldman, N; Lewenstein, M; Martin-Delgado, M A

    2010-11-01

    We show that ultracold Fermi gases in optical superlattices can be used as quantum simulators of relativistic lattice fermions in 3+1 dimensions. By exploiting laser-assisted tunneling, we find an analogue of the so-called naive Dirac fermions, and thus provide a realization of the fermion doubling problem. Moreover, we show how to implement Wilson fermions, and discuss how their mass can be inverted by tuning the laser intensities. In this regime, our atomic gas corresponds to a phase of matter where Maxwell electrodynamics is replaced by axion electrodynamics: a 3D topological insulator.

  19. Wilson Fermions and Axion Electrodynamics in Optical Lattices

    SciTech Connect

    Bermudez, A.; Martin-Delgado, M. A.; Mazza, L.; Rizzi, M.; Goldman, N.; Lewenstein, M.

    2010-11-05

    We show that ultracold Fermi gases in optical superlattices can be used as quantum simulators of relativistic lattice fermions in 3+1 dimensions. By exploiting laser-assisted tunneling, we find an analogue of the so-called naive Dirac fermions, and thus provide a realization of the fermion doubling problem. Moreover, we show how to implement Wilson fermions, and discuss how their mass can be inverted by tuning the laser intensities. In this regime, our atomic gas corresponds to a phase of matter where Maxwell electrodynamics is replaced by axion electrodynamics: a 3D topological insulator.

  20. Dynamic complex optical fields for optical manipulation, 3D microscopy, and photostimulation of neurotransmitters

    NASA Astrophysics Data System (ADS)

    Daria, Vincent R.; Stricker, Christian; Bekkers, John; Redman, Steve; Bachor, Hans

    2010-08-01

    We demonstrate a multi-functional system capable of multiple-site two-photon excitation of photo-sensitive compounds as well as transfer of optical mechanical properties on an array of mesoscopic particles. We use holographic projection of a single Ti:Sapphire laser operating in femtosecond pulse mode to show that the projected three-dimensional light patterns have sufficient spatiotemporal photon density for multi-site two-photon excitation of biological fluorescent markers and caged neurotransmitters. Using the same laser operating in continuous-wave mode, we can use the same light patterns for non-invasive transfer of both linear and orbital angular momentum on a variety of mesoscopic particles. The system also incorporates high-speed scanning using acousto-optic modulators to rapidly render 3D images of neuron samples via two-photon microscopy.

  1. Quantum memory in an optical lattice

    SciTech Connect

    Nunn, J.; Michelberger, P.; Reim, K. F.; Lee, K. C.; Langford, N. K.; Walmsley, I. A.; Dorner, U.; Jaksch, D.

    2010-08-15

    Arrays of atoms trapped in optical lattices are appealing as storage media for photons, since motional dephasing of the atoms is eliminated. The regular lattice is also associated with band structure in the dispersion experienced by incident photons. Here we study the influence of this band structure on the efficiency of quantum memories based on electromagnetically induced transparency (EIT) and on Raman absorption. We observe a number of interesting effects, such as both reduced and superluminal group velocities, enhanced atom-photon coupling, and anomalous transmission. These effects are ultimately deleterious to the memory efficiency, but they are easily avoided by tuning the optical fields away from the band edges.

  2. Integration of 3D anatomical data obtained by CT imaging and 3D optical scanning for computer aided implant surgery

    PubMed Central

    2011-01-01

    Background A precise placement of dental implants is a crucial step to optimize both prosthetic aspects and functional constraints. In this context, the use of virtual guiding systems has been recognized as a fundamental tool to control the ideal implant position. In particular, complex periodontal surgeries can be performed using preoperative planning based on CT data. The critical point of the procedure relies on the lack of accuracy in transferring CT planning information to surgical field through custom-made stereo-lithographic surgical guides. Methods In this work, a novel methodology is proposed for monitoring loss of accuracy in transferring CT dental information into periodontal surgical field. The methodology is based on integrating 3D data of anatomical (impression and cast) and preoperative (radiographic template) models, obtained by both CT and optical scanning processes. Results A clinical case, relative to a fully edentulous jaw patient, has been used as test case to assess the accuracy of the various steps concurring in manufacturing surgical guides. In particular, a surgical guide has been designed to place implants in the bone structure of the patient. The analysis of the results has allowed the clinician to monitor all the errors, which have been occurring step by step manufacturing the physical templates. Conclusions The use of an optical scanner, which has a higher resolution and accuracy than CT scanning, has demonstrated to be a valid support to control the precision of the various physical models adopted and to point out possible error sources. A case study regarding a fully edentulous patient has confirmed the feasibility of the proposed methodology. PMID:21338504

  3. Investigation the effect of lattice angle on the band gap width in 3D phononic crystals with rhombohedral(I) lattice

    NASA Astrophysics Data System (ADS)

    Salehi, H.; Aryadoust, M.; Shoushtari, M. Zargar

    2014-07-01

    In this paper, the propagation of acoustic waves in the phononic crystal of 3D with rhombohedral(I) lattice is studied theoretically. The crystal composite constituted of nickel spheres embedded in epoxy. The calculations of the band structure and density of states are performed with the plane wave expansion method in the irreducible part of Brillouin zone. In the present work, we have investigated the effect of lattice angle on the band structure and width of the band gap rhombohedral(I) lattice in the irreducible part of the first Brillouin zone and its planes separately. The results show that more than one complete band gape are formed in the four planes of the irreducible part. The most complete band gaps are formed in the (111) plane and the widest complete band gap in (443) with an angle greater than 80. So, if the sound passes through the (111) and (443) planes for the lattice angle close to 90, the crystal phononic displays the excellent insulation behavior. Moreover, in the other planes, the lattice angle does not affect on the width and the number of band gaps. Also, for the filling fraction 5 %, the widest complete band gap is formed. These results are consistent with the effect of symmetry on the band gap width, because the (111) plane has the most symmetry.

  4. 3D phase stepping optical profilometry using a fiber optic Lloyd's mirror

    NASA Astrophysics Data System (ADS)

    Kosoglu, Gulsen; Yuksel, Heba; Inci, M. Naci

    2016-04-01

    This study defines measurements of three-dimensional rigid-body shapes by using a fiber optic Lloyd's mirror. A fiber optic Lloyd's mirror assembly is basically a technique to create an optical interference pattern using the real light point sources and their images. The generated fringe pattern thanks to this technique is deformed when it is projected on an object's surface. The introduced surface profilometry algorithm depends on a multi-step phase shifting process. The deformed fringe patterns containing information of the object's surface profile are captured by a digital CCD camera. While each frames are captured, required π/2 phase shifts for interference fringe pattern are obtained by mechanically sliding the Lloyd assembly via an ordinary micrometer stage. Some preprocess algorithms are applied to the frames and are processed with an algorithm to accomplish 3D topographies. Finally, the continuous data determines the depth information and the surface topography of the object. The experimental setup is simple and low cost to construct, and is insensitive to the ambient temperature fluctuations and environmental vibrations that cause unwanted effects on the projected fringe pattern. Such a fiber optic Lloyd's system which provides an accurate non-contact measurement without contaminating and harming the object surface has a wide range of applications from laser interference based lithography in nano-scale to macro-scale interferometers.

  5. A quantum gas of polar molecules in an optical lattice

    NASA Astrophysics Data System (ADS)

    Moses, Steven A.

    Ultracold polar molecules, because of their long-range, spatially anisotropic interactions, are a new quantum system in which to study novel many-body phenomena. In our lab, we have produced the first quantum gas of 40K 87Rb polar molecules. These molecules were found to undergo exothermic chemical reactions, and this led to interesting studies of chemistry near absolute zero. By creating the molecules at individual sites of a 3D optical lattice, we completely suppress these chemical reactions, and the polar molecule gas becomes stable and lives for tens of seconds. This thesis documents our efforts to explore coherent, many-body phenomena resulting from long-range dipolar interactions in the lattice. By encoding a spin-1/2 system in the rotational states of the molecules, we were able to realize spin-exchange interactions based on a spin Hamiltonian, which is one of the first steps in studying quantum magnetism with polar molecules. While this study was the first realization of such coherent dipolar interactions with polar molecules in a lattice, its full potential was limited by the low lattice filling fractions. Using our ability to exquisitely control the initial atomic gas mixture, we loaded a Mott insulator of Rb and a band insulator of K into the lattice. This quantum synthesis approach led to significantly higher molecular filling fractions and represents the first fully connected system of polar molecules in an optical lattice. This low-entropy quantum gas of polar molecules opens the door to interesting quantum simulations, which should be attainable in the next generation of the experiment.

  6. Ultra-Cold Atoms on Optical Lattices

    ERIC Educational Resources Information Center

    Ghosh, Parag

    2009-01-01

    The field of ultra-cold atoms, since the achievement of Bose-Einstein Condensation (Anderson et al., 1995; Davis et al., 1995; Bradley et al., 1995), have seen an immensely growing interest over the past decade. With the creation of optical lattices, new possibilities of studying some of the widely used models in condensed matter have opened up.…

  7. Inspection, 3D modelling, and rapid prototyping of cultural heritage by means of a 3D optical digitiser

    NASA Astrophysics Data System (ADS)

    Docchio, F.; Sansoni, G.; Trebeschi, M.

    2005-06-01

    This paper presents the activity carried out to perform the three-dimensional acquisition of the "Vittoria Alata", a 2m-high, bronze statue, symbol of our City, located at the Civici Musei di Arte e Storia (S. Giulia) of Brescia. The acquisition of the statue has been performed by using a three-dimensional vision system based on active triangulation and on the projection of non-coherent light. This system, called OPL-3D, represents one of the research products of our Laboratory, which has been active for years in the development of techniques and systems for the contactless acquisition of free-form, complex shapes. The study, originally motivated by the need to explore a new hypothesis on the origin of the "Vittoria Alata", led to its complete digitization and description in terms of both polygonal and NURBS-based models. A suite of copies of the whole statue has been obtained in the framework of the collaboration between the City Museum and the EOS Electro Optical Systems GmbH, located in Munich, Germany. As a first step, one 30 cm-high replica of the whole statue has been produced using a low-resolution triangle model of the statue (3.5 millions of triangles). As a second step, two 1:1 scale copies of the statue have been produced. For them, the Laboratory has provided the high resolution STL file (16 millions of triangles). The paper discusses in detail the hardware and the software facilities used to implement the whole process, and gives a comprehensive description of the results.

  8. Lattice Boltzmann Simulation of a Flow over a 3D Cube in a wind Tunnel

    NASA Astrophysics Data System (ADS)

    Shock, Richard; Chen, Hudong; Yakhot, Victor

    2001-06-01

    It is argued that even a simplified version of the Boltzmann equation in a relaxation time approximation is equivalent to the hydrodynamic equations, involving infinite number of non-linear terms. Used for turbulence modelling, where the relaxation time and mean -free path are both space and field dependent, this equation is equivalent to the classic Navier-Stokes + turbulent model representations, provided the gradients are small. If, however, the non-equilibrium effects are strong, all higher non-linearities cannot be neglected. Thus, the Boltmann approximation can be extremely usefull for description of strongly non-equilibrium and time - dependent flows. This fact has been demonstrated on a wide variety of flows of both academic and industrial interest ranging from a simple 2D channel flow to 3D flows over various production cars. In this talk the quality of the approach is demonstrated on a simulation of the flow over a 3D cube in a wind tunnel. The predicted parameters of this strongly unsteady flow are compared with experimental data. The agreement is very good.

  9. Protein folding optimization based on 3D off-lattice model via an improved artificial bee colony algorithm.

    PubMed

    Li, Bai; Lin, Mu; Liu, Qiao; Li, Ya; Zhou, Changjun

    2015-10-01

    Protein folding is a fundamental topic in molecular biology. Conventional experimental techniques for protein structure identification or protein folding recognition require strict laboratory requirements and heavy operating burdens, which have largely limited their applications. Alternatively, computer-aided techniques have been developed to optimize protein structures or to predict the protein folding process. In this paper, we utilize a 3D off-lattice model to describe the original protein folding scheme as a simplified energy-optimal numerical problem, where all types of amino acid residues are binarized into hydrophobic and hydrophilic ones. We apply a balance-evolution artificial bee colony (BE-ABC) algorithm as the minimization solver, which is featured by the adaptive adjustment of search intensity to cater for the varying needs during the entire optimization process. In this work, we establish a benchmark case set with 13 real protein sequences from the Protein Data Bank database and evaluate the convergence performance of BE-ABC algorithm through strict comparisons with several state-of-the-art ABC variants in short-term numerical experiments. Besides that, our obtained best-so-far protein structures are compared to the ones in comprehensive previous literature. This study also provides preliminary insights into how artificial intelligence techniques can be applied to reveal the dynamics of protein folding. Graphical Abstract Protein folding optimization using 3D off-lattice model and advanced optimization techniques.

  10. Nanoimprint of a 3D structure on an optical fiber for light wavefront manipulation

    NASA Astrophysics Data System (ADS)

    Calafiore, Giuseppe; Koshelev, Alexander; Allen, Frances I.; Dhuey, Scott; Sassolini, Simone; Wong, Edward; Lum, Paul; Munechika, Keiko; Cabrini, Stefano

    2016-09-01

    Integration of complex photonic structures onto optical fiber facets enables powerful platforms with unprecedented optical functionalities. Conventional nanofabrication technologies, however, do not permit viable integration of complex photonic devices onto optical fibers owing to their low throughput and high cost. In this paper we report the fabrication of a three-dimensional structure achieved by direct nanoimprint lithography on the facet of an optical fiber. Nanoimprint processes and tools were specifically developed to enable a high lithographic accuracy and coaxial alignment of the optical device with respect to the fiber core. To demonstrate the capability of this new approach, a 3D beam splitter has been designed, imprinted and optically characterized. Scanning electron microscopy and optical measurements confirmed the good lithographic capabilities of the proposed approach as well as the desired optical performance of the imprinted structure. The inexpensive solution presented here should enable advancements in areas such as integrated optics and sensing, achieving enhanced portability and versatility of fiber optic components.

  11. Nanoimprint of a 3D structure on an optical fiber for light wavefront manipulation.

    PubMed

    Calafiore, Giuseppe; Koshelev, Alexander; Allen, Frances I; Dhuey, Scott; Sassolini, Simone; Wong, Edward; Lum, Paul; Munechika, Keiko; Cabrini, Stefano

    2016-09-16

    Integration of complex photonic structures onto optical fiber facets enables powerful platforms with unprecedented optical functionalities. Conventional nanofabrication technologies, however, do not permit viable integration of complex photonic devices onto optical fibers owing to their low throughput and high cost. In this paper we report the fabrication of a three-dimensional structure achieved by direct nanoimprint lithography on the facet of an optical fiber. Nanoimprint processes and tools were specifically developed to enable a high lithographic accuracy and coaxial alignment of the optical device with respect to the fiber core. To demonstrate the capability of this new approach, a 3D beam splitter has been designed, imprinted and optically characterized. Scanning electron microscopy and optical measurements confirmed the good lithographic capabilities of the proposed approach as well as the desired optical performance of the imprinted structure. The inexpensive solution presented here should enable advancements in areas such as integrated optics and sensing, achieving enhanced portability and versatility of fiber optic components.

  12. The Calculation of the Band Structure in 3D Phononic Crystal with Hexagonal Lattice

    NASA Astrophysics Data System (ADS)

    Aryadoust, Mahrokh; Salehi, H.

    2015-12-01

    In this article, the propagation of acoustic waves in the phononic crystals (PCs) of three dimensions with the hexagonal (HEX) lattice is studied theoretically. The PCs are constituted of nickel (Ni) spheres embedded in epoxy. The calculations of the band structure and the density of states are performed using the plane wave expansion (PWE) method in the irreducible part of the Brillouin zone (BZ). In this study, we analyse the dependence of the band structures inside (the complete band gap width) on c/a and filling fraction in the irreducible part of the first BZ. Also, we have analysed the band structure of the ALHA and MLHKM planes. The results show that the maximum width of absolute elastic band gap (AEBG) (0.045) in the irreducible part of the BZ of HEX lattice is formed for c/a=6 and filling fraction equal to 0.01. In addition, the maximum of the first and second AEBG widths are 0.0884 and 0.0474, respectively, in the MLHKM plane, and the maximum of the first and second AEBG widths are 0.0851 and 0.0431, respectively, in the ALHA plane.

  13. An effective evolutionary algorithm for protein folding on 3D FCC HP model by lattice rotation and generalized move sets

    PubMed Central

    2013-01-01

    Background Proteins are essential biological molecules which play vital roles in nearly all biological processes. It is the tertiary structure of a protein that determines its functions. Therefore the prediction of a protein's tertiary structure based on its primary amino acid sequence has long been the most important and challenging subject in biochemistry, molecular biology and biophysics. In the past, the HP lattice model was one of the ab initio methods that many researchers used to forecast the protein structure. Although these kinds of simplified methods could not achieve high resolution, they provided a macrocosm-optimized protein structure. The model has been employed to investigate general principles of protein folding, and plays an important role in the prediction of protein structures. Methods In this paper, we present an improved evolutionary algorithm for the protein folding problem. We study the problem on the 3D FCC lattice HP model which has been widely used in previous research. Our focus is to develop evolutionary algorithms (EA) which are robust, easy to implement and can handle various energy functions. We propose to combine three different local search methods, including lattice rotation for crossover, K-site move for mutation, and generalized pull move; these form our key components to improve previous EA-based approaches. Results We have carried out experiments over several data sets which were used in previous research. The results of the experiments show that our approach is able to find optimal conformations which were not found by previous EA-based approaches. Conclusions We have investigated the geometric properties of the 3D FCC lattice and developed several local search techniques to improve traditional EA-based approaches to the protein folding problem. It is known that EA-based approaches are robust and can handle arbitrary energy functions. Our results further show that by extensive development of local searches, EA can also be very

  14. Dual FIB-SEM 3D Imaging and Lattice Boltzmann Modeling of Porosimetry and Multiphase Flow in Chalk

    NASA Astrophysics Data System (ADS)

    Rinehart, A. J.; Yoon, H.; Dewers, T. A.; Heath, J. E.; Petrusak, R.

    2010-12-01

    Mercury intrusion porosimetry (MIP) is an often-applied technique for determining pore throat distributions and seal analysis of fine-grained rocks. Due to closure effects, potential pore collapse, and complex pore network topologies, MIP data interpretation can be ambiguous, and often biased toward smaller pores in the distribution. We apply 3D imaging techniques and lattice-Boltzmann modeling in interpreting MIP data for samples of the Cretaceous Selma Group Chalk. In the Mississippi Interior Salt Basin, the Selma Chalk is the apparent seal for oil and gas fields in the underlying Eutaw Fm., and, where unfractured, the Selma Chalk is one of the regional-scale seals identified by the Southeast Regional Carbon Sequestration Partnership for CO2 injection sites. Dual focused ion - scanning electron beam and laser scanning confocal microscopy methods are used for 3D imaging of nanometer-to-micron scale microcrack and pore distributions in the Selma Chalk. A combination of image analysis software is used to obtain geometric pore body and throat distributions and other topological properties, which are compared to MIP results. 3D data sets of pore-microfracture networks are used in Lattice Boltzmann simulations of drainage (wetting fluid displaced by non-wetting fluid via the Shan-Chen algorithm), which in turn are used to model MIP procedures. Results are used in interpreting MIP results, understanding microfracture-matrix interaction during multiphase flow, and seal analysis for underground CO2 storage. This work was supported by the US Department of Energy, Office of Basic Energy Sciences as part of an Energy Frontier Research Center. Sandia National Laboratories is a multi-program laboratory operated by Sandia Corporation, a wholly owned subsidiary of Lockheed Martin Company, for the U.S. Department of Energy’s National Nuclear Security Administration under contract DE-AC04-94AL85000.

  15. Ultracold Quantum Gases in Hexagonal Optical Lattices

    NASA Astrophysics Data System (ADS)

    Sengstock, Klaus

    2010-03-01

    Hexagonal structures occur in a vast variety of systems, ranging from honeycombs of bees in life sciences to carbon nanotubes in material sciences. The latter, in particular its unfolded two-dimensional layer -- Graphene -- has rapidly grown to one of the most discussed topics in condensed-matter physics. Not only does it show proximity to various carbon-based materials but also exceptional properties owing to its unusual energy spectrum. In quantum optics, ultracold quantum gases confined in periodic light fields have shown to be very general and versatile instruments to mimic solid state systems. However, so far nearly all experiments were performed in cubic lattice geometries only. Here we report on the first experimental realization of ultracold quantum gases in a state-dependent, two-dimensional, Graphene-like optical lattice with hexagonal symmetry. The lattice is realized via a spin-dependent optical lattice structure with alternating σ^+ and σ^- -sites and thus constitutes a so called `magnetic'-lattice with `antiferromagnetic'-structure. Atoms with different spin orientation can be loaded to specific lattice sites or -- depending on the parameters -- to the whole lattice. As a consequence e.g. superpositions of a superfluid spin component with a different spin component in the Mott-insulating phase can be realized as well as spin-dependent transport properties, disorder etc. After preparing an antiferromagnetically ordered state we e.g. measure sustainable changes of the transport properties of the atoms. This manifests in a significant reduction of the tunneling as compared to a single-component system. We attribute this observation to a partial tunneling blockade for one spin component induced by population in another spin component localized at alternating lattice sites. Within a Gutzwiller-Ansatz we calculate the phase diagrams for the mixed spin-states and find very good agreement with our experimental results. Moreover, by state-resolved recording

  16. Nondestructive optical testing of 3D disperse systems with micro- and nano-particles

    NASA Astrophysics Data System (ADS)

    Bezrukova, Alexandra G.

    2005-04-01

    Nondestructive testing and analysis of three-dimensional (3D) disperse systems (DS) with micro- and nano-particles of different nature by complex of optical compatible methods can provide further progress in on-line control of water and air. The simultaneous analysis of 3D-DS by refractometry, absorbency, fluorescence and by different types of light scattering can help to elaborate the sensing elements for specific impurity control. In our research we have investigated by complex of optical methods different 3D-DS such as: proteins, nucleoproteids, lipoproteids, liposomes, viruses, virosomes, lipid emulsions, blood substitutes, latexes, liquid crystals, biological cells with various form and size (including bacterial cells), metallic powders, clays, kimberlites, zeolites, oils, crude oils, etc., and mixtures -- proteins with nucleic acids, liposomes and viruses, liquid crystals with surfactants, mixtures of clay with bacterial cells, samples of natural and water-supply waters, etc. This experience suggests that the set of optical parameters of so called second class is unique for each 3D-DS. In another words each DS can be characterized by n-dimensional vector in n-dimensional space of optical parameters. Mixtures can be considered as polycomponent and polymodal 3D-DS (such as natural water and air). Due to the fusion of various optical data it is possible to indicate by information statistical theory the inverse physical problem on the presence of impurities in mixtures (viruses, bacteria, oil, metallic particles, etc.), and in this case polymodality of particle size distribution is not an obstacle. Bank of optical data for 3D-DS is the base for analysis by information-statistical method.

  17. Fibonacci optical lattices for tunable quantum quasicrystals

    NASA Astrophysics Data System (ADS)

    Singh, K.; Saha, K.; Parameswaran, S. A.; Weld, D. M.

    2015-12-01

    We describe a quasiperiodic optical lattice, created by a physical realization of the abstract cut-and-project construction underlying all quasicrystals. The resulting potential is a generalization of the Fibonacci tiling. Calculation of the energies and wave functions of ultracold atoms loaded into such a lattice demonstrate a multifractal energy spectrum, a singular continuous momentum-space structure, and the existence of controllable edge states. These results open the door to cold atom quantum simulation experiments in tunable or dynamic quasicrystalline potentials, including topological pumping of edge states and phasonic spectroscopy.

  18. Complementary cellophane optic gate and its use for a 3D iPad without glasses

    NASA Astrophysics Data System (ADS)

    Iizuka, K.

    2012-04-01

    A complementary cellophane optic gate was fabricated using a birefringent cellophane sheet. Previous versions of the optic gate required the retardance of the cellophane to be as close to 180° as possible throughout the entire visible wavelength range, which meant it was often difficult to find a cellophane sheet with the right thickness and dispersion characteristics to meet this requirement. The complementary optic gate reported in this paper has no restriction on the thickness, composition, or wavelength range of the cellophane sheet except that the cellophane must have some birefringence. Even with an arbitrary retardance, an extinction ratio of 5 × 10-3 was achieved at λ = 0.63 μm. The optic gate was used to convert an iPad into a 3D display without the need for the observer to wear glasses. The high extinction ratio of the optic gate resulted in a 3D display of supreme quality.

  19. 3D printing of tissue-simulating phantoms as a traceable standard for biomedical optical measurement

    NASA Astrophysics Data System (ADS)

    Dong, Erbao; Wang, Minjie; Shen, Shuwei; Han, Yilin; Wu, Qiang; Xu, Ronald

    2016-01-01

    Optical phantoms are commonly used to validate and calibrate biomedical optical devices in order to ensure accurate measurement of optical properties in biological tissue. However, commonly used optical phantoms are based on homogenous materials that reflect neither optical properties nor multi-layer heterogeneities of biological tissue. Using these phantoms for optical calibration may result in significant bias in biological measurement. We propose to characterize and fabricate tissue simulating phantoms that simulate not only the multi-layer heterogeneities but also optical properties of biological tissue. The tissue characterization module detects tissue structural and functional properties in vivo. The phantom printing module generates 3D tissue structures at different scales by layer-by-layer deposition of phantom materials with different optical properties. The ultimate goal is to fabricate multi-layer tissue simulating phantoms as a traceable standard for optimal calibration of biomedical optical spectral devices.

  20. Air-structured optical fibre drawn from a 3D-printed preform

    NASA Astrophysics Data System (ADS)

    Cook, Kevin; Leon-Saval, Sergio; Canning, John; Reid, Zane; Hossain, Md. Arafat; Peng, Gang-Ding

    2015-09-01

    We report the first optical fibre drawn from a 3D-printed preform. An air-structured polymer preform is printed using a modified butadiene plastic called Bendlay as opposed to the more-common Acrylonitrile Butadiene Styrene (ABS). The preform is subsequently drawn to fibre form at a relatively low temperature of 160 °C and maintains its air-structured cladding holes. Such ability to freely-design and 3D-print complex preform structures, such as photonic bandgap and photonic crystal structures, opens up an exciting new front in optical fibre fabrication.

  1. Near-infrared optical imaging of human brain based on the semi-3D reconstruction algorithm

    NASA Astrophysics Data System (ADS)

    Liu, Ming; Meng, Wei; Qin, Zhuanping; Zhou, Xiaoqing; Zhao, Huijuan; Gao, Feng

    2013-03-01

    In the non-invasive brain imaging with near-infrared light, precise head model is of great significance to the forward model and the image reconstruction. To deal with the individual difference of human head tissues and the problem of the irregular curvature, in this paper, we extracted head structure with Mimics software from the MRI image of a volunteer. This scheme makes it possible to assign the optical parameters to every layer of the head tissues reasonably and solve the diffusion equation with the finite-element analysis. During the solution of the inverse problem, a semi-3D reconstruction algorithm is adopted to trade off the computation cost and accuracy between the full 3-D and the 2-D reconstructions. In this scheme, the changes in the optical properties of the inclusions are assumed either axially invariable or confined to the imaging plane, while the 3-D nature of the photon migration is still retained. This therefore leads to a 2-D inverse issue with the matched 3-D forward model. Simulation results show that comparing to the 3-D reconstruction algorithm, the Semi-3D reconstruction algorithm cut 27% the calculation time consumption.

  2. Quantifying axis orientation in 3D using polarization-sensitive optical coherence tomography (Conference Presentation)

    NASA Astrophysics Data System (ADS)

    Liu, Chao; Black, Adam J.; Wang, Hui; Akkin, Taner

    2016-03-01

    The optic axis of birefringent tissues indicates the direction of structural anisotropy. Polarization-sensitive Optical Coherence Tomography (PS-OCT) can provide reflectivity contrast as well as retardance and optic axis orientation contrasts that originate from tissue birefringence. We introduce imaging 3D tissue anisotropy by using a single-camera and polarization-maintaining fiber (PMF) based PS-OCT, which utilizes normal and angled illuminations. Because environmental factors such as the movement of PMF and temperature fluctuations induce arbitrary phase changes, the optic axis orientation measurement has a time-varying offset. In order to measure the absolute axis orientation, we add a calibration path which dynamically provides the arbitrary offset to be subtracted from the relative axis orientation values. The axis orientation on the normal plane is the 2D projection of the fiber direction in 3D space. We propose to characterize the axis orientation in different planes (xy, xy' and x'y planes) by using normal and angled illuminations. This allows calculation of the polar angle that completes the orientation information in 3D. Polarization-based optical systems relying on one illumination angle measure the "apparent birefringence" that light encounters rather than the "true birefringence". Birefringence as a measure of anisotropy is quantified with the orientation information in 3D. The method and validation with a biological tissue are presented. The study can facilitate imaging and mapping the structural connections in anisotropic tissues including the brain.

  3. Study of 3D printing method for GRIN micro-optics devices

    NASA Astrophysics Data System (ADS)

    Wang, P. J.; Yeh, J. A.; Hsu, W. Y.; Cheng, Y. C.; Lee, W.; Wu, N. H.; Wu, C. Y.

    2016-03-01

    Conventional optical elements are based on either refractive or reflective optics theory to fulfill the design specifications via optics performance data. In refractive optical lenses, the refractive index of materials and radius of curvature of element surfaces determine the optical power and wavefront aberrations so that optical performance can be further optimized iteratively. Although gradient index (GRIN) phenomenon in optical materials is well studied for more than a half century, the optics theory in lens design via GRIN materials is still yet to be comprehensively investigated before realistic GRIN lenses are manufactured. In this paper, 3D printing method for manufacture of micro-optics devices with special features has been studied based on methods reported in the literatures. Due to the additive nature of the method, GRIN lenses in micro-optics devices seem to be readily achievable if a design methodology is available. First, derivation of ray-tracing formulae is introduced for all possible structures in GRIN lenses. Optics simulation program is employed for characterization of GRIN lenses with performance data given by aberration coefficients in Zernike polynomial. Finally, a proposed structure of 3D printing machine is described with conceptual illustration.

  4. Twisted complex superfluids in optical lattices.

    PubMed

    Jürgensen, Ole; Sengstock, Klaus; Lühmann, Dirk-Sören

    2015-09-08

    We show that correlated pair tunneling drives a phase transition to a twisted superfluid with a complex order parameter. This unconventional superfluid phase spontaneously breaks the time-reversal symmetry and is characterized by a twisting of the complex phase angle between adjacent lattice sites. We discuss the entire phase diagram of the extended Bose-Hubbard model for a honeycomb optical lattice showing a multitude of quantum phases including twisted superfluids, pair superfluids, supersolids and twisted supersolids. Furthermore, we show that the nearest-neighbor interactions lead to a spontaneous breaking of the inversion symmetry of the lattice and give rise to dimerized density-wave insulators, where particles are delocalized on dimers. For two components, we find twisted superfluid phases with strong correlations between the species already for surprisingly small pair-tunneling amplitudes. Interestingly, this ground state shows an infinite degeneracy ranging continuously from a supersolid to a twisted superfluid.

  5. Twisted complex superfluids in optical lattices

    PubMed Central

    Jürgensen, Ole; Sengstock, Klaus; Lühmann, Dirk-Sören

    2015-01-01

    We show that correlated pair tunneling drives a phase transition to a twisted superfluid with a complex order parameter. This unconventional superfluid phase spontaneously breaks the time-reversal symmetry and is characterized by a twisting of the complex phase angle between adjacent lattice sites. We discuss the entire phase diagram of the extended Bose—Hubbard model for a honeycomb optical lattice showing a multitude of quantum phases including twisted superfluids, pair superfluids, supersolids and twisted supersolids. Furthermore, we show that the nearest-neighbor interactions lead to a spontaneous breaking of the inversion symmetry of the lattice and give rise to dimerized density-wave insulators, where particles are delocalized on dimers. For two components, we find twisted superfluid phases with strong correlations between the species already for surprisingly small pair-tunneling amplitudes. Interestingly, this ground state shows an infinite degeneracy ranging continuously from a supersolid to a twisted superfluid. PMID:26345721

  6. Honeycomb optical lattices with harmonic confinement

    SciTech Connect

    Block, J. Kusk; Nygaard, N.

    2010-05-15

    We consider the fate of the Dirac points in the spectrum of a honeycomb optical lattice in the presence of a harmonic confining potential. By numerically solving the tight binding model, we calculate the density of states and find that the energy dependence can be understood from analytical arguments. In addition, we show that the density of states of the harmonically trapped lattice system can be understood by application of a local density approximation based on the density of states in the homogeneous lattice. The Dirac points are found to survive locally in the trap as evidenced by the local density of states. Furthermore, they give rise to a distinct spatial profile of a noninteracting Fermi gas.

  7. Twisted complex superfluids in optical lattices.

    PubMed

    Jürgensen, Ole; Sengstock, Klaus; Lühmann, Dirk-Sören

    2015-01-01

    We show that correlated pair tunneling drives a phase transition to a twisted superfluid with a complex order parameter. This unconventional superfluid phase spontaneously breaks the time-reversal symmetry and is characterized by a twisting of the complex phase angle between adjacent lattice sites. We discuss the entire phase diagram of the extended Bose-Hubbard model for a honeycomb optical lattice showing a multitude of quantum phases including twisted superfluids, pair superfluids, supersolids and twisted supersolids. Furthermore, we show that the nearest-neighbor interactions lead to a spontaneous breaking of the inversion symmetry of the lattice and give rise to dimerized density-wave insulators, where particles are delocalized on dimers. For two components, we find twisted superfluid phases with strong correlations between the species already for surprisingly small pair-tunneling amplitudes. Interestingly, this ground state shows an infinite degeneracy ranging continuously from a supersolid to a twisted superfluid. PMID:26345721

  8. The Abelian Higgs model on Optical Lattice?

    NASA Astrophysics Data System (ADS)

    Meurice, Yannick; Tsai, Shan-Wen; Bazavov, Alexei; Zhang, Jin

    2015-03-01

    We study the Lattice Gauge Theory of the U(1)-Higgs model in 1+1 dimensions in the strongly coupled regime. We discuss the plaquette corrections to the effective theory where link variables are integrated out. We discuss matching with the second-order perturbation theory effective Hamiltonian for various Bose-Hubbard models. This correspondence can be exploited for building a lattice gauge theory simulator on optical lattices. We propose to implement the quantum rotors which appear in the Hamiltonian formulation using Bose mixtures or p-orbitals. Recent progress on magnetic effects in 2+1 dimensions will be discussed. Supported by the Army Research Office of the Department of Defense under Award Number W911NF-13-1-0119.

  9. Viewpoint-independent 3D object segmentation for randomly stacked objects using optical object detection

    NASA Astrophysics Data System (ADS)

    Chen, Liang-Chia; Nguyen, Thanh-Hung; Lin, Shyh-Tsong

    2015-10-01

    This work proposes a novel approach to segmenting randomly stacked objects in unstructured 3D point clouds, which are acquired by a random-speckle 3D imaging system for the purpose of automated object detection and reconstruction. An innovative algorithm is proposed; it is based on a novel concept of 3D watershed segmentation and the strategies for resolving over-segmentation and under-segmentation problems. Acquired 3D point clouds are first transformed into a corresponding orthogonally projected depth map along the optical imaging axis of the 3D sensor. A 3D watershed algorithm based on the process of distance transformation is then performed to detect the boundary, called the edge dam, between stacked objects and thereby to segment point clouds individually belonging to two stacked objects. Most importantly, an object-matching algorithm is developed to solve the over- and under-segmentation problems that may arise during the watershed segmentation. The feasibility and effectiveness of the method are confirmed experimentally. The results reveal that the proposed method is a fast and effective scheme for the detection and reconstruction of a 3D object in a random stack of such objects. In the experiments, the precision of the segmentation exceeds 95% and the recall exceeds 80%.

  10. 3D reconstruction of coronary arteries using frequency domain optical coherence tomography images and biplane angiography.

    PubMed

    Athanasiou, L S; Bourantas, C V; Siogkas, P K; Sakellarios, A I; Exarchos, T P; Naka, K K; Papafaklis, M I; Michalis, L K; Prati, F; Fotiadis, D I

    2012-01-01

    The aim of this study is to describe a new method for three-dimensional (3D) reconstruction of coronary arteries using Frequency Domain Optical Coherence Tomography (FD-OCT) images. The rationale is to fuse the information about the curvature of the artery, derived from biplane angiographies, with the information regarding the lumen wall, which is produced from the FD-OCT examination. The method is based on a three step approach. In the first step the lumen borders in FD-OCT images are detected. In the second step a 3D curve is produced using the center line of the vessel from the two biplane projections. Finally in the third step the detected lumen borders are placed perpendicularly onto the path based on the centroid of each lumen border. The result is a 3D reconstructed artery produced by all the lumen borders of the FD-OCT pullback representing the 3D arterial geometry of the vessel.

  11. LBM-EP: Lattice-Boltzmann method for fast cardiac electrophysiology simulation from 3D images.

    PubMed

    Rapaka, S; Mansi, T; Georgescu, B; Pop, M; Wright, G A; Kamen, A; Comaniciu, Dorin

    2012-01-01

    Current treatments of heart rhythm troubles require careful planning and guidance for optimal outcomes. Computational models of cardiac electrophysiology are being proposed for therapy planning but current approaches are either too simplified or too computationally intensive for patient-specific simulations in clinical practice. This paper presents a novel approach, LBM-EP, to solve any type of mono-domain cardiac electrophysiology models at near real-time that is especially tailored for patient-specific simulations. The domain is discretized on a Cartesian grid with a level-set representation of patient's heart geometry, previously estimated from images automatically. The cell model is calculated node-wise, while the transmembrane potential is diffused using Lattice-Boltzmann method within the domain defined by the level-set. Experiments on synthetic cases, on a data set from CESC'10 and on one patient with myocardium scar showed that LBM-EP provides results comparable to an FEM implementation, while being 10 - 45 times faster. Fast, accurate, scalable and requiring no specific meshing, LBM-EP paves the way to efficient and detailed models of cardiac electrophysiology for therapy planning. PMID:23286029

  12. 3D mapping of elastic modulus using shear wave optical micro-elastography

    PubMed Central

    Zhu, Jiang; Qi, Li; Miao, Yusi; Ma, Teng; Dai, Cuixia; Qu, Yueqiao; He, Youmin; Gao, Yiwei; Zhou, Qifa; Chen, Zhongping

    2016-01-01

    Elastography provides a powerful tool for histopathological identification and clinical diagnosis based on information from tissue stiffness. Benefiting from high resolution, three-dimensional (3D), and noninvasive optical coherence tomography (OCT), optical micro-elastography has the ability to determine elastic properties with a resolution of ~10 μm in a 3D specimen. The shear wave velocity measurement can be used to quantify the elastic modulus. However, in current methods, shear waves are measured near the surface with an interference of surface waves. In this study, we developed acoustic radiation force (ARF) orthogonal excitation optical coherence elastography (ARFOE-OCE) to visualize shear waves in 3D. This method uses acoustic force perpendicular to the OCT beam to excite shear waves in internal specimens and uses Doppler variance method to visualize shear wave propagation in 3D. The measured propagation of shear waves agrees well with the simulation results obtained from finite element analysis (FEA). Orthogonal acoustic excitation allows this method to measure the shear modulus in a deeper specimen which extends the elasticity measurement range beyond the OCT imaging depth. The results show that the ARFOE-OCE system has the ability to noninvasively determine the 3D elastic map. PMID:27762276

  13. Solving tolerancing and 3D beam shaping problems by multifunctional wave optical design

    NASA Astrophysics Data System (ADS)

    Buehling, Sven; Wyrowski, Frank

    2000-10-01

    A strategy for designing optical systems that are optimized for multiple optical functions on the basis of wave optics is presented. Each optical function is composed of an input field, a set of fixed system parameters, and a merit function. A design algorithm is proposed which is applicable for optical systems consisting of an transmission operator followed by an arbitrary linear operator. The goal is to find the transmission operator which is optimal for all optical functions simultaneously. In later design steps, the found transmission operator can be transformed to real optical elements, for instance by using the thin element approximation. It is shown that the algorithm is efficiently applicable by investigating two sample applications for multifunctional wave optical design: the design of tolerant systems and 3D beam shaping.

  14. Bone tissue phantoms for optical flowmeters at large interoptode spacing generated by 3D-stereolithography

    PubMed Central

    Binzoni, Tiziano; Torricelli, Alessandro; Giust, Remo; Sanguinetti, Bruno; Bernhard, Paul; Spinelli, Lorenzo

    2014-01-01

    A bone tissue phantom prototype allowing to test, in general, optical flowmeters at large interoptode spacings, such as laser-Doppler flowmetry or diffuse correlation spectroscopy, has been developed by 3D-stereolithography technique. It has been demonstrated that complex tissue vascular systems of any geometrical shape can be conceived. Absorption coefficient, reduced scattering coefficient and refractive index of the optical phantom have been measured to ensure that the optical parameters reasonably reproduce real human bone tissue in vivo. An experimental demonstration of a possible use of the optical phantom, utilizing a laser-Doppler flowmeter, is also presented. PMID:25136496

  15. Bone tissue phantoms for optical flowmeters at large interoptode spacing generated by 3D-stereolithography.

    PubMed

    Binzoni, Tiziano; Torricelli, Alessandro; Giust, Remo; Sanguinetti, Bruno; Bernhard, Paul; Spinelli, Lorenzo

    2014-08-01

    A bone tissue phantom prototype allowing to test, in general, optical flowmeters at large interoptode spacings, such as laser-Doppler flowmetry or diffuse correlation spectroscopy, has been developed by 3D-stereolithography technique. It has been demonstrated that complex tissue vascular systems of any geometrical shape can be conceived. Absorption coefficient, reduced scattering coefficient and refractive index of the optical phantom have been measured to ensure that the optical parameters reasonably reproduce real human bone tissue in vivo. An experimental demonstration of a possible use of the optical phantom, utilizing a laser-Doppler flowmeter, is also presented.

  16. Optical design for uniform scanning in MEMS-based 3D imaging lidar.

    PubMed

    Lee, Xiaobao; Wang, Chunhui

    2015-03-20

    This paper proposes a method for the optical system design of uniform scanning in a larger scan field of view (FOV) in 3D imaging lidar. The theoretical formulas are derived for the design scheme. By employing the optical design software ZEMAX, a foldaway uniform scanning optical system based on MEMS has been designed, and the scanning uniformity and spot size of the system on the target plane, perpendicular to optical axis, are analyzed and discussed. Results show that the designed system can scan uniformly within the FOV of 40°×40° with small spot size for the target at distance of about 100 m. PMID:25968504

  17. Bone tissue phantoms for optical flowmeters at large interoptode spacing generated by 3D-stereolithography.

    PubMed

    Binzoni, Tiziano; Torricelli, Alessandro; Giust, Remo; Sanguinetti, Bruno; Bernhard, Paul; Spinelli, Lorenzo

    2014-08-01

    A bone tissue phantom prototype allowing to test, in general, optical flowmeters at large interoptode spacings, such as laser-Doppler flowmetry or diffuse correlation spectroscopy, has been developed by 3D-stereolithography technique. It has been demonstrated that complex tissue vascular systems of any geometrical shape can be conceived. Absorption coefficient, reduced scattering coefficient and refractive index of the optical phantom have been measured to ensure that the optical parameters reasonably reproduce real human bone tissue in vivo. An experimental demonstration of a possible use of the optical phantom, utilizing a laser-Doppler flowmeter, is also presented. PMID:25136496

  18. Rapid 3D µ-printing of polymer optical whispering-gallery mode resonators.

    PubMed

    Wu, Jushuai; Guo, Xin; Zhang, A Ping; Tam, Hwa-Yaw

    2015-11-16

    A novel microfabrication method for rapid printing of polymer optical whispering-gallery mode (WGM) resonators is presented. A 3D micro-printing technology based on high-speed optical spatial modulator (SLM) and high-power UV light source is developed to fabricate suspended-disk WGM resonator array using SU-8 photoresist. The optical spectral responses of the fabricated polymer WGM resonators were measured with a biconically tapered optical fiber. Experimental results reveal that the demonstrated method is very flexible and time-saving for rapid fabrication of complex polymer WGM resonators. PMID:26698452

  19. Strongly correlated quantum walks in optical lattices

    NASA Astrophysics Data System (ADS)

    Preiss, Philipp M.; Ma, Ruichao; Tai, M. Eric; Lukin, Alexander; Rispoli, Matthew; Zupancic, Philip; Lahini, Yoav; Islam, Rajibul; Greiner, Markus

    2015-03-01

    Full control over the dynamics of interacting, indistinguishable quantum particles is an important prerequisite for the experimental study of strongly correlated quantum matter and the implementation of high-fidelity quantum information processing. We demonstrate such control over the quantum walk—the quantum mechanical analog of the classical random walk—in the regime where dynamics are dominated by interparticle interactions. Using interacting bosonic atoms in an optical lattice, we directly observed fundamental effects such as the emergence of correlations in two-particle quantum walks, as well as strongly correlated Bloch oscillations in tilted optical lattices. Our approach can be scaled to larger systems, greatly extending the class of problems accessible via quantum walks.

  20. The NIM Sr Optical Lattice Clock

    NASA Astrophysics Data System (ADS)

    Lin, Y.; Wang, Q.; Li, Y.; Meng, F.; Lin, B.; Zang, E.; Sun, Z.; Fang, F.; Li, T.; Fang, Z.

    2016-06-01

    A 87Sr optical lattice clock is built at the National Institute of Metrology (NIM) of China. The atoms undergo two stages of laser cooling before being loaded into a horizontal optical lattice at the magic wavelength of 813 nm. After being interrogated by a narrow linewidth 698 nm clock laser pulse, the normalized excitation rate is measured to get the frequency error, which is then used to lock the clock laser to the ultra-narrow 1S0-3P0 clock transition. The total systematic uncertainty of the clock is evaluated to be 2.3 × 10-16, and the absolute frequency of the clock is measured to be 429 228 004 229 873.7(1.4) Hz with reference to the NIM5 cesium fountain.

  1. Tracking left ventricular borders in 3D echocardiographic sequences using motion-guided optical flow

    NASA Astrophysics Data System (ADS)

    Leung, K. Y. Esther; Danilouchkine, Mikhail G.; van Stralen, Marijn; de Jong, Nico; van der Steen, Antonius F. W.; Bosch, Johan G.

    2009-02-01

    For obtaining quantitative and objective functional parameters from three-dimensional (3D) echocardiographic sequences, automated segmentation methods may be preferable to cumbersome manual delineation of 3D borders. In this study, a novel optical-flow based tracking method is proposed for propagating 3D endocardial contours of the left ventricle throughout the cardiac cycle. To take full advantage of the time-continuous nature of cardiac motion, a statistical motion model was explicitly embedded in the optical flow solution. The cardiac motion was modeled as frame-to-frame affine transforms, which were extracted using Procrustes analysis on a set of training contours. Principal component analysis was applied to obtain a compact model of cardiac motion throughout the whole cardiac cycle. The parameters of this model were resolved in an optical flow manner, via spatial and temporal gradients in image intensity. The algorithm was tested on 36 noncontrast and 28 contrast enhanced 3D echocardiographic sequences in a leave-one-out manner. Good results were obtained using a combination of the proposed motion-guided method and a purely data-driven optical flow approach. The improvement was particularly noticeable in areas where the LV wall was obscured by image artifacts. In conclusion, the results show the applicability of the proposed method in clinical quality echocardiograms.

  2. Micro-Macro Scale Mixing Interactions by Intestinal Villi Enhance Absorption: a 3D Lattice-Boltzmann Model

    NASA Astrophysics Data System (ADS)

    Wang, Yanxing; Brasseur, James; Banco, Gino

    2010-11-01

    Muscle-induced villi motions may create a micro-scale flow that couples with a lumen-scale macro flow to enhance nutrient transport and absorption in the intestine. Using a 3D multiscale lattice Boltzmann model of a lid-driven cavity flow with microscale 3-D leaf and finger-like villi in pendular motion at the lower surface, we analyze the coupling between micro and macro-scale nutrient mixing and absorption at the villi surfaces. RESULTS: The villi motions enhance absorption by creating a micro-mixing layer (MML) that pumps low concentration fluid from between villi groups and attracts fluid with high concentration from the macro flow. The MML couples with the macro flow via a diffusion layer. Leaf-like villi create the strongest MML and, consequently, the highest absorption rates. The finger-like villi create a weaker MML due to the existence of flow between villi. The strength of the MML and nutrient absorption increases with villus frequency. The absorption rate also increases with villus length; however the simulations predict an optimal length close to the physiological length of villi in humans. The complex flow structure will be discussed. We conclude that the interaction between micro-scale villi-induced fluid motions and macro-scale motility-induced flow may play a significant role in intestinal absorption. Supported by NSF Grant CTS-056215.

  3. Towards non-invasive 3D hepatotoxicity assays with optical coherence phase microscopy

    NASA Astrophysics Data System (ADS)

    Nelson, Leonard J.; Koulovasilopoulos, Andreas; Treskes, Philipp; Hayes, Peter C.; Plevris, John N.; Bagnaninchi, Pierre O.

    2015-03-01

    Three-dimensional tissue-engineered models are increasingly recognised as more physiologically-relevant than standard 2D cell culture for pre-clinical drug toxicity testing. However, many types of conventional toxicity assays are incompatible with dense 3D tissues. This study investigated the use of optical coherence phase microscopy (OCPM) as a novel approach to assess cell death in 3D tissue culture. For 3D micro-spheroid formation Human hepatic C3A cells were encapsulated in hyaluronic acid gels and cultured in 100μl MEME/10%FBS in 96-well plates. After spheroid formation the 3D liver constructs were exposed to acetaminophen on culture day 8. Acetaminophen hepatotoxicity in 3D cultures was evaluated using standard biochemical assays. An inverted OCPM in common path configuration was developed with a Callisto OCT engine (Thorlabs), centred at 930nm and a custom scanning head. Intensity data were used to perform in-depth microstructural imaging. In addition, phase fluctuations were measured by collecting several successive B scans at the same location, and statistics on the first time derivative of the phase, i.e. time fluctuations, were analysed over the acquisition time interval to retrieve overall cell viability. OCPM intensity (cell cluster size) and phase fluctuation statistics were directly compared with biochemical assays. In this study, we investigated optical coherence phase tomography to assess cell death in a 3d liver model after exposure to a prototypical hepatotoxin, acetaminophen. We showed that OCPM has the potential to assess noninvasively and label-free drug toxicity in 3D tissue models.

  4. Determination of 3D optic axis orientation in cartilage by polarization-sensitive optical coherence tomography

    NASA Astrophysics Data System (ADS)

    Ugryumova, Nadya; Matcher, Stephen J.

    2007-02-01

    Polarization-sensitive optical coherence tomography has been used to solve fast-axis fibre orientation in three dimension space. Previously we have demonstrated that the apparent variations in polar angle orientation of collagen fibers along sagittal ridge of equine third metacarpophalangeal joint exist. A quantitative method based on multiple angles of illumination has been proposed to determine the polar angle of the collagen fibers. This method however ignored the full 3-D structure by assuming that the collagen fibers long-axis lay within the plane of incidence. A new quantitative method based on the theory of light propagation in uniaxial materials is described which avoids this assumption. To test this method we have performed control experiments on a sample of equine tendon (this tissue has well defined c-axis lying along the long-axis of the tendon). Several samples of tendon were cut to achieve a planar surface inclined at -20° to the long axis. Additional 30° rotation provided non-zero azimuthal angle. The surface was then imaged using incident beam angles -40°, -20°, 0, +20°, +40° in two orthogonal planes. Values for both the polar and azimuthal angles were then derived using a numerical optimisation procedure. Results agreed qualitatively with the nominal values but suggested that the accuracy was limited by our method of determining the apparent birefringence.

  5. Determination of 3D optic axis orientation in cartilage by polarization-sensitive optical coherence tomography

    NASA Astrophysics Data System (ADS)

    Ugryumova, Nadya; Bonesi, Marco; Matcher, Stephen J.

    2008-02-01

    Polarization-sensitive optical coherence tomography has been used to solve fast-axis fibre orientation in three dimension space. Previously we have demonstrated that the apparent variations in polar angle orientation of collagen fibers along sagittal ridge of equine third metacarpophalangeal joint exist. A quantitative method based on multiple angles of illumination has been proposed to determine the polar angle of the collagen fibers. This method however ignored the full 3D structure by assuming that the collagen fibers long-axis lay within the plane of incidence. A new quantitative method based on the theory of light propagation in uniaxial materials is described which avoids this assumption. To test this method we have performed control experiments on a sample of equine tendon (this tissue has well defined c-axis lying along the long-axis of the tendon). Several samples of tendon were cut to achieve a planar surface inclined at -20° to the long axis. Additional 30° rotation provided non-zero azimuthal angle. The surface was then imaged using incident beam angles -40°, -20°, 0, +20°, +40° in two orthogonal planes. Values for both the polar and azimuthal angles were then derived using a numerical optimisation procedure. Results agreed qualitatively with the nominal values but suggested that the accuracy was limited by our method of determining the apparent birefringence.

  6. A 3D integral imaging optical see-through head-mounted display.

    PubMed

    Hua, Hong; Javidi, Bahram

    2014-06-01

    An optical see-through head-mounted display (OST-HMD), which enables optical superposition of digital information onto the direct view of the physical world and maintains see-through vision to the real world, is a vital component in an augmented reality (AR) system. A key limitation of the state-of-the-art OST-HMD technology is the well-known accommodation-convergence mismatch problem caused by the fact that the image source in most of the existing AR displays is a 2D flat surface located at a fixed distance from the eye. In this paper, we present an innovative approach to OST-HMD designs by combining the recent advancement of freeform optical technology and microscopic integral imaging (micro-InI) method. A micro-InI unit creates a 3D image source for HMD viewing optics, instead of a typical 2D display surface, by reconstructing a miniature 3D scene from a large number of perspective images of the scene. By taking advantage of the emerging freeform optical technology, our approach will result in compact, lightweight, goggle-style AR display that is potentially less vulnerable to the accommodation-convergence discrepancy problem and visual fatigue. A proof-of-concept prototype system is demonstrated, which offers a goggle-like compact form factor, non-obstructive see-through field of view, and true 3D virtual display.

  7. Performance of an improved first generation optical CT scanner for 3D dosimetry

    NASA Astrophysics Data System (ADS)

    Qian, Xin; Adamovics, John; Wuu, Cheng-Shie

    2013-12-01

    Performance analysis of a modified 3D dosimetry optical scanner based on the first generation optical CT scanner OCTOPUS is presented. The system consists of PRESAGE™ dosimeters, the modified 3D scanner, and a new developed in-house user control panel written in Labview program which provides more flexibility to optimize mechanical control and data acquisition technique. The total scanning time has been significantly reduced from initial 8 h to ∼2 h by using the modified scanner. The functional performance of the modified scanner has been evaluated in terms of the mechanical integrity uncertainty of the data acquisition process. Optical density distribution comparison between the modified scanner, OCTOPUS and the treatment plan system has been studied. It has been demonstrated that the agreement between the modified scanner and treatment plans is comparable with that between the OCTOPUS and treatment plans.

  8. Analytical description of 3D optical pulse diffraction by a phase-shifted Bragg grating.

    PubMed

    Golovastikov, Nikita V; Bykov, Dmitry A; Doskolovich, Leonid L; Soifer, Victor A

    2016-08-22

    Diffraction of a three-dimensional (3D) spatiotemporal optical pulse by a phase-shifted Bragg grating (PSBG) is considered. The pulse diffraction is described in terms of signal transmission through a linear system with a transfer function determined by the reflection or transmission coefficient of the PSBG. Resonant approximations of the reflection and transmission coefficients of the PSBG as functions of the angular frequency and the in-plane component of the wave vector are obtained. Using these approximations, a hyperbolic partial differential equation (Klein-Gordon equation) describing a general class of transformations of the incident 3D pulse envelope is derived. A solution to this equation is found in the form of a convolution integral. The presented rigorous simulation results fully confirm the proposed theoretical description. The obtained results may find application in the design of new devices for spatiotemporal pulse shaping and for optical information processing and analog optical computing. PMID:27557167

  9. Optical clearing based cellular-level 3D visualization of intact lymph node cortex

    PubMed Central

    Song, Eunjoo; Seo, Howon; Choe, Kibaek; Hwang, Yoonha; Ahn, Jinhyo; Ahn, Soyeon; Kim, Pilhan

    2015-01-01

    Lymph node (LN) is an important immune organ that controls adaptive immune responses against foreign pathogens and abnormal cells. To facilitate efficient immune function, LN has highly organized 3D cellular structures, vascular and lymphatic system. Unfortunately, conventional histological analysis relying on thin-sliced tissue has limitations in 3D cellular analysis due to structural disruption and tissue loss in the processes of fixation and tissue slicing. Optical sectioning confocal microscopy has been utilized to analyze 3D structure of intact LN tissue without physical tissue slicing. However, light scattering within biological tissues limits the imaging depth only to superficial portion of LN cortex. Recently, optical clearing techniques have shown enhancement of imaging depth in various biological tissues, but their efficacy for LN are remained to be investigated. In this work, we established optical clearing procedure for LN and achieved 3D volumetric visualization of the whole cortex of LN. More than 4 times improvement in imaging depth was confirmed by using LN obtained from H2B-GFP/actin-DsRed double reporter transgenic mouse. With adoptive transfer of GFP expressing B cells and DsRed expressing T cells and fluorescent vascular labeling by anti-CD31 and anti-LYVE-1 antibody conjugates, we successfully visualized major cellular-level structures such as T-cell zone, B-cell follicle and germinal center. Further, we visualized the GFP expressing metastatic melanoma cell colony, vasculature and lymphatic vessels in the LN cortex. PMID:26504662

  10. Generation of nearly 3D-unpolarized evanescent optical near fields using total internal reflection.

    PubMed

    Hassinen, Timo; Popov, Sergei; Friberg, Ari T; Setälä, Tero

    2016-07-01

    We analyze the time-domain partial polarization of optical fields composed of two evanescent waves created in total internal reflection by random electromagnetic beams with orthogonal planes of incidence. We show that such a two-beam configuration enables to generate nearly unpolarized, genuine three-component (3D) near fields. This result complements earlier studies on spectral polarization, which state that at least three symmetrically propagating beams are required to produce a 3D-unpolarized near field. The degree of polarization of the near field can be controlled by adjusting the polarization states and mutual correlation of the incident beams.

  11. Generation of nearly 3D-unpolarized evanescent optical near fields using total internal reflection.

    PubMed

    Hassinen, Timo; Popov, Sergei; Friberg, Ari T; Setälä, Tero

    2016-07-01

    We analyze the time-domain partial polarization of optical fields composed of two evanescent waves created in total internal reflection by random electromagnetic beams with orthogonal planes of incidence. We show that such a two-beam configuration enables to generate nearly unpolarized, genuine three-component (3D) near fields. This result complements earlier studies on spectral polarization, which state that at least three symmetrically propagating beams are required to produce a 3D-unpolarized near field. The degree of polarization of the near field can be controlled by adjusting the polarization states and mutual correlation of the incident beams. PMID:27367071

  12. Real-time visualization of 3-D dynamic microscopic objects using optical diffraction tomography.

    PubMed

    Kim, Kyoohyun; Kim, Kyung Sang; Park, Hyunjoo; Ye, Jong Chul; Park, Yongkeun

    2013-12-30

    3-D refractive index (RI) distribution is an intrinsic bio-marker for the chemical and structural information about biological cells. Here we develop an optical diffraction tomography technique for the real-time reconstruction of 3-D RI distribution, employing sparse angle illumination and a graphic processing unit (GPU) implementation. The execution time for the tomographic reconstruction is 0.21 s for 96(3) voxels, which is 17 times faster than that of a conventional approach. We demonstrated the real-time visualization capability with imaging the dynamics of Brownian motion of an anisotropic colloidal dimer and the dynamic shape change in a red blood cell upon shear flow.

  13. Optical design of wavelength selective CPVT system with 3D/2D hybrid concentration

    NASA Astrophysics Data System (ADS)

    Ahmad, N.; Ijiro, T.; Yamada, N.; Kawaguchi, T.; Maemura, T.; Ohashi, H.

    2012-10-01

    Optical design of a concentrating photovoltaic/thermal (CPVT) system is carried out. Using wavelength-selective optics, the system demonstrates 3-D concentration onto a solar cell and 2-D concentration onto a thermal receiver. Characteristics of the two types of concentrator systems are examined with ray-tracing analysis. The first system is a glazed mirror-based concentrator system mounted on a 2-axis pedestal tracker. The size of the secondary optical element is minimized to decrease the cost of the system, and it has a wavelength-selective function for performing 3-D concentration onto a solar cell and 2-D concentration onto a thermal receiver. The second system is a non-glazed beamdown concentrator system containing parabolic mirrors in the lower part. The beam-down selective mirror performs 3-D concentration onto a solar cell placed above the beam-down selective mirror, and 2-D concentration down to a thermal receiver placed at the bottom level. The system is mounted on a two-axis carousel tracker. A parametric study is performed for those systems with different geometrical 2-D/3-D concentration ratios. Wavelength-selective optics such as hot/cold mirrors and spectrum-splitting technologies are taken into account in the analysis. Results show reduced heat load on the solar cell and increased total system efficiency compared to a non-selective CPV system. Requirements for the wavelength-selective properties are elucidated. It is also shown that the hybrid concept with 2-D concentration onto a thermal receiver and 3-D concentration onto a solar cell has an advantageous geometry because of the high total system efficiency and compatibility with the piping arrangement of the thermal receiver.

  14. Combined scanning probe nanotomography and optical microspectroscopy: a correlative technique for 3D characterization of nanomaterials.

    PubMed

    Mochalov, Konstantin E; Efimov, Anton E; Bobrovsky, Alexey; Agapov, Igor I; Chistyakov, Anton A; Oleinikov, Vladimir; Sukhanova, Alyona; Nabiev, Igor

    2013-10-22

    Combination of 3D structural analysis with optical characterization of the same sample area on the nanoscale is a highly demanded approach in nanophotonics, materials science, and quality control of nanomaterial. We have developed a correlative microscopy technique where the 3D structure of the sample is reconstructed on the nanoscale by means of a "slice-and-view" combination of ultramicrotomy and scanning probe microscopy (scanning probe nanotomography, SPNT), and its optical characteristics are analyzed using microspectroscopy. This approach has been used to determine the direct quantitative relationship of the 3D structural characteristics of nanovolumes of materials with their microscopic optical properties. This technique has been applied to 3D structural and optical characterization of a hybrid material consisting of cholesteric liquid crystals doped with fluorescent quantum dots (QDs) that can be used for photochemical patterning and image recording through the changes in the dissymmetry factor of the circular polarization of QD emission. The differences in the polarization images and fluorescent spectra of this hybrid material have proved to be correlated with the arrangement of the areas of homogeneous distribution and heterogeneous clustering of QDs. The reconstruction of the 3D nanostructure of the liquid crystal matrix in the areas of homogeneous QDs distribution has shown that QDs do not perturb the periodic planar texture of the cholesteric liquid crystal matrix, whereas QD clusters do perturb it. The combined microspectroscopy-nanotomography technique will be important for evaluating the effects of nanoparticles on the structural organization of organic and liquid crystal matrices and biomedical materials, as well as quality control of nanotechnology fabrication processes and products.

  15. Combined scanning probe nanotomography and optical microspectroscopy: a correlative technique for 3D characterization of nanomaterials.

    PubMed

    Mochalov, Konstantin E; Efimov, Anton E; Bobrovsky, Alexey; Agapov, Igor I; Chistyakov, Anton A; Oleinikov, Vladimir; Sukhanova, Alyona; Nabiev, Igor

    2013-10-22

    Combination of 3D structural analysis with optical characterization of the same sample area on the nanoscale is a highly demanded approach in nanophotonics, materials science, and quality control of nanomaterial. We have developed a correlative microscopy technique where the 3D structure of the sample is reconstructed on the nanoscale by means of a "slice-and-view" combination of ultramicrotomy and scanning probe microscopy (scanning probe nanotomography, SPNT), and its optical characteristics are analyzed using microspectroscopy. This approach has been used to determine the direct quantitative relationship of the 3D structural characteristics of nanovolumes of materials with their microscopic optical properties. This technique has been applied to 3D structural and optical characterization of a hybrid material consisting of cholesteric liquid crystals doped with fluorescent quantum dots (QDs) that can be used for photochemical patterning and image recording through the changes in the dissymmetry factor of the circular polarization of QD emission. The differences in the polarization images and fluorescent spectra of this hybrid material have proved to be correlated with the arrangement of the areas of homogeneous distribution and heterogeneous clustering of QDs. The reconstruction of the 3D nanostructure of the liquid crystal matrix in the areas of homogeneous QDs distribution has shown that QDs do not perturb the periodic planar texture of the cholesteric liquid crystal matrix, whereas QD clusters do perturb it. The combined microspectroscopy-nanotomography technique will be important for evaluating the effects of nanoparticles on the structural organization of organic and liquid crystal matrices and biomedical materials, as well as quality control of nanotechnology fabrication processes and products. PMID:23991901

  16. Dynamic optical lattices: two-dimensional rotating and accordion lattices for ultracold atoms.

    PubMed

    Williams, R A; Pillet, J D; Al-Assam, S; Fletcher, B; Shotter, M; Foot, C J

    2008-10-13

    We demonstrate a novel experimental arrangement which can rotate a 2D optical lattice at frequencies up to several kilohertz. Ultracold atoms in such a rotating lattice can be used for the direct quantum simulation of strongly correlated systems under large effective magnetic fields, allowing investigation of phenomena such as the fractional quantum Hall effect. Our arrangement also allows the periodicity of a 2D optical lattice to be varied dynamically, producing a 2D accordion lattice.

  17. Introductory review on `Flying Triangulation': a motion-robust optical 3D measurement principle

    NASA Astrophysics Data System (ADS)

    Ettl, Svenja

    2015-04-01

    'Flying Triangulation' (FlyTri) is a recently developed principle which allows for a motion-robust optical 3D measurement of rough surfaces. It combines a simple sensor with sophisticated algorithms: a single-shot sensor acquires 2D camera images. From each camera image, a 3D profile is generated. The series of 3D profiles generated are aligned to one another by algorithms, without relying on any external tracking device. It delivers real-time feedback of the measurement process which enables an all-around measurement of objects. The principle has great potential for small-space acquisition environments, such as the measurement of the interior of a car, and motion-sensitive measurement tasks, such as the intraoral measurement of teeth. This article gives an overview of the basic ideas and applications of FlyTri. The main challenges and their solutions are discussed. Measurement examples are also given to demonstrate the potential of the measurement principle.

  18. 3D Optical Measuring Systems and Laser Technologies for Scientific and Industrial Applications

    NASA Astrophysics Data System (ADS)

    Chugui, Yu.; Verkhoglyad, A.; Poleshchuk, A.; Korolkov, V.; Sysoev, E.; Zavyalov, P.

    2013-12-01

    Modern industry and science require novel 3D optical measuring systems and laser technologies with micro/nanometer resolution for solving actual problems. Such systems, including the 3D dimensional inspection of ceramic parts for electrotechnical industry, laser inspection of wheel pair diagnostic for running trains and 3D superresolution low-coherent micro- /nanoprofilometers are presented. The newest results in the field of laser technologies for high-precision synthesis of microstructures by updated image generator using the semiconductor laser are given. The measuring systems and the laser image generator developed and produced by TDI SIE and IAE SB RAS have been tested by customers and used in different branches of industry and science.

  19. An optical system for detecting 3D high-speed oscillation of a single ultrasound microbubble

    PubMed Central

    Liu, Yuan; Yuan, Baohong

    2013-01-01

    As contrast agents, microbubbles have been playing significant roles in ultrasound imaging. Investigation of microbubble oscillation is crucial for microbubble characterization and detection. Unfortunately, 3-dimensional (3D) observation of microbubble oscillation is challenging and costly because of the bubble size—a few microns in diameter—and the high-speed dynamics under MHz ultrasound pressure waves. In this study, a cost-efficient optical confocal microscopic system combined with a gated and intensified charge-coupled device (ICCD) camera were developed to detect 3D microbubble oscillation. The capability of imaging microbubble high-speed oscillation with much lower costs than with an ultra-fast framing or streak camera system was demonstrated. In addition, microbubble oscillations along both lateral (x and y) and axial (z) directions were demonstrated. Accordingly, this system is an excellent alternative for 3D investigation of microbubble high-speed oscillation, especially when budgets are limited. PMID:24049677

  20. Mesoscopic in vivo 3-D tracking of sparse cell populations using angular multiplexed optical projection tomography

    PubMed Central

    Chen, Lingling; Alexandrov, Yuriy; Kumar, Sunil; Andrews, Natalie; Dallman, Margaret J.; French, Paul M. W.; McGinty, James

    2015-01-01

    We describe an angular multiplexed imaging technique for 3-D in vivo cell tracking of sparse cell distributions and optical projection tomography (OPT) with superior time-lapse resolution and a significantly reduced light dose compared to volumetric time-lapse techniques. We demonstrate that using dual axis OPT, where two images are acquired simultaneously at different projection angles, can enable localization and tracking of features in 3-D with a time resolution equal to the camera frame rate. This is achieved with a 200x reduction in light dose compared to an equivalent volumetric time-lapse single camera OPT acquisition with 200 projection angles. We demonstrate the application of this technique to mapping the 3-D neutrophil migration pattern observed over ~25.5 minutes in a live 2 day post-fertilisation transgenic LysC:GFP zebrafish embryo following a tail wound. PMID:25909009

  1. An optical system for detecting 3D high-speed oscillation of a single ultrasound microbubble.

    PubMed

    Liu, Yuan; Yuan, Baohong

    2013-01-01

    As contrast agents, microbubbles have been playing significant roles in ultrasound imaging. Investigation of microbubble oscillation is crucial for microbubble characterization and detection. Unfortunately, 3-dimensional (3D) observation of microbubble oscillation is challenging and costly because of the bubble size-a few microns in diameter-and the high-speed dynamics under MHz ultrasound pressure waves. In this study, a cost-efficient optical confocal microscopic system combined with a gated and intensified charge-coupled device (ICCD) camera were developed to detect 3D microbubble oscillation. The capability of imaging microbubble high-speed oscillation with much lower costs than with an ultra-fast framing or streak camera system was demonstrated. In addition, microbubble oscillations along both lateral (x and y) and axial (z) directions were demonstrated. Accordingly, this system is an excellent alternative for 3D investigation of microbubble high-speed oscillation, especially when budgets are limited. PMID:24049677

  2. 3D printing method for freeform fabrication of optical phantoms simulating heterogeneous biological tissue

    NASA Astrophysics Data System (ADS)

    Wang, Minjie; Shen, Shuwei; Yang, Jie; Dong, Erbao; Xu, Ronald

    2014-03-01

    The performance of biomedical optical imaging devices heavily relies on appropriate calibration. However, many of existing calibration phantoms for biomedical optical devices are based on homogenous materials without considering the multi-layer heterogeneous structures observed in biological tissue. Using such a phantom for optical calibration may result in measurement bias. To overcome this problem, we propose a 3D printing method for freeform fabrication of tissue simulating phantoms with multilayer heterogeneous structure. The phantom simulates not only the morphologic characteristics of biological tissue but also absorption and scattering properties. The printing system is based on a 3D motion platform with coordinated control of the DC motors. A special jet nozzle is designed to mix base, scattering, and absorption materials at different ratios. 3D tissue structures are fabricated through layer-by-layer printing with selective deposition of phantom materials of different ingredients. Different mixed ratios of base, scattering and absorption materials have been tested in order to optimize the printing outcome. A spectrometer and a tissue spectrophotometer are used for characterizing phantom absorption and scattering properties. The goal of this project is to fabricate skin tissue simulating phantoms as a traceable standard for the calibration of biomedical optical spectral devices.

  3. Wave optics theory and 3-D deconvolution for the light field microscope

    PubMed Central

    Broxton, Michael; Grosenick, Logan; Yang, Samuel; Cohen, Noy; Andalman, Aaron; Deisseroth, Karl; Levoy, Marc

    2013-01-01

    Light field microscopy is a new technique for high-speed volumetric imaging of weakly scattering or fluorescent specimens. It employs an array of microlenses to trade off spatial resolution against angular resolution, thereby allowing a 4-D light field to be captured using a single photographic exposure without the need for scanning. The recorded light field can then be used to computationally reconstruct a full volume. In this paper, we present an optical model for light field microscopy based on wave optics, instead of previously reported ray optics models. We also present a 3-D deconvolution method for light field microscopy that is able to reconstruct volumes at higher spatial resolution, and with better optical sectioning, than previously reported. To accomplish this, we take advantage of the dense spatio-angular sampling provided by a microlens array at axial positions away from the native object plane. This dense sampling permits us to decode aliasing present in the light field to reconstruct high-frequency information. We formulate our method as an inverse problem for reconstructing the 3-D volume, which we solve using a GPU-accelerated iterative algorithm. Theoretical limits on the depth-dependent lateral resolution of the reconstructed volumes are derived. We show that these limits are in good agreement with experimental results on a standard USAF 1951 resolution target. Finally, we present 3-D reconstructions of pollen grains that demonstrate the improvements in fidelity made possible by our method. PMID:24150383

  4. Parametric estimation of 3D tubular structures for diffuse optical tomography

    PubMed Central

    Larusson, Fridrik; Anderson, Pamela G.; Rosenberg, Elizabeth; Kilmer, Misha E.; Sassaroli, Angelo; Fantini, Sergio; Miller, Eric L.

    2013-01-01

    We explore the use of diffuse optical tomography (DOT) for the recovery of 3D tubular shapes representing vascular structures in breast tissue. Using a parametric level set method (PaLS) our method incorporates the connectedness of vascular structures in breast tissue to reconstruct shape and absorption values from severely limited data sets. The approach is based on a decomposition of the unknown structure into a series of two dimensional slices. Using a simplified physical model that ignores 3D effects of the complete structure, we develop a novel inter-slice regularization strategy to obtain global regularity. We report on simulated and experimental reconstructions using realistic optical contrasts where our method provides a more accurate estimate compared to an unregularized approach and a pixel based reconstruction. PMID:23411913

  5. Design and verification of diffractive optical elements for speckle generation of 3-D range sensors

    NASA Astrophysics Data System (ADS)

    Du, Pei-Qin; Shih, Hsi-Fu; Chen, Jenq-Shyong; Wang, Yi-Shiang

    2016-09-01

    The optical projection using speckles is one of the structured light methods that have been applied to three-dimensional (3-D) range sensors. This paper investigates the design and fabrication of diffractive optical elements (DOEs) for generating the light field with uniformly distributed speckles. Based on the principles of computer generated holograms, the iterative Fourier transform algorithm was adopted for the DOE design. It was used to calculate the phase map for diffracting the incident laser beam into a goal pattern with distributed speckles. Four patterns were designed in the study. Their phase maps were first examined by a spatial light modulator and then fabricated on glass substrates by microfabrication processes. Finally, the diffraction characteristics of the fabricated devices were verified. The experimental results show that the proposed methods are applicable to the DOE design of 3-D range sensors. Furthermore, any expected diffraction area and speckle density could be possibly achieved according to the relations presented in the paper.

  6. Propagation of optical coherence lattices in the turbulent atmosphere.

    PubMed

    Liu, Xianlong; Yu, Jiayi; Cai, Yangjian; Ponomarenko, Sergey A

    2016-09-15

    We explore the propagation of recently introduced optical coherence lattices (OCLs) in the turbulent atmosphere. We show that the lattice intensity profile and the spatial degree of coherence will display periodicity reciprocity over long propagation distances even though the lattices are affected by the turbulence. The lattice periodicity reciprocity has been previously conjectured to be advantageous for free-space information transfer and optical communications. We then show how one can increase the distance over which the lattice periodicity reciprocity is preserved in the turbulent atmosphere by engineering input lattice beam parameters. We also show that the OCLs have scintillation indices lower than those of Gaussian beams. PMID:27628352

  7. Computational optical-sectioning microscopy for 3D quantization of cell motion: results and challenges

    NASA Astrophysics Data System (ADS)

    McNally, James G.

    1994-09-01

    How cells move and navigate within a 3D tissue mass is of central importance in such diverse problems as embryonic development, wound healing and metastasis. This locomotion can now be visualized and quantified by using computation optical-sectioning microscopy. In this approach, a series of 2D images at different depths in a specimen are stacked to construct a 3D image, and then with a knowledge of the microscope's point-spread function, the actual distribution of fluorescent intensity in the specimen is estimated via computation. When coupled with wide-field optics and a cooled CCD camera, this approach permits non-destructive 3D imaging of living specimens over long time periods. With these techniques, we have observed a complex diversity of motile behaviors in a model embryonic system, the cellular slime mold Dictyostelium. To understand the mechanisms which control these various behaviors, we are examining motion in various Dictyostelium mutants with known defects in proteins thought to be essential for signal reception, cell-cell adhesion or locomotion. This application of computational techniques to analyze 3D cell locomotion raises several technical challenges. Image restoration techniques must be fast enough to process numerous 1 Gbyte time-lapse data sets (16 Mbytes per 3D image X 60 time points). Because some cells are weakly labeled and background intensity is often high due to unincorporated dye, the SNR in some of these images is poor. Currently, the images are processed by a regularized linear least- squares restoration method, and occasionally by a maximum-likelihood method. Also required for these studies are accurate automated- tracking procedures to generate both 3D trajectories for individual cells and 3D flows for a group of cells. Tracking is currently done independently for each cell, using a cell's image as a template to search for a similar image at the next time point. Finally, sophisticated visualization techniques are needed to view the

  8. 3D printed sensing patches with embedded polymer optical fibre Bragg gratings

    NASA Astrophysics Data System (ADS)

    Zubel, Michal G.; Sugden, Kate; Saez-Rodriguez, D.; Nielsen, K.; Bang, O.

    2016-05-01

    The first demonstration of a polymer optical fibre Bragg grating (POFBG) embedded in a 3-D printed structure is reported. Its cyclic strain performance and temperature characteristics are examined and discussed. The sensing patch has a repeatable strain sensitivity of 0.38 pm/μepsilon. Its temperature behaviour is unstable, with temperature sensitivity values varying between 30-40 pm/°C.

  9. Imaging and 3-D dosimetry: top tips for MRI and optical CT

    NASA Astrophysics Data System (ADS)

    Doran, Simon J.

    2010-11-01

    The conference "refresher session" associated with this abstract reviews the main principles of the two most important imaging readout modalities for 3-D dosimetry: MRI and optical CT. Best practices for both these techniques are already described in several different places in the literature, but, for the uninitiated, there are a number of pitfalls. Here, I list some of the important considerations required to obtain good results from these methods and point to relevant prior work.

  10. Rapid fabrication of complex 3D extracellular microenvironments by dynamic optical projection stereolithography.

    PubMed

    Zhang, A Ping; Qu, Xin; Soman, Pranav; Hribar, Kolin C; Lee, Jin W; Chen, Shaochen; He, Sailing

    2012-08-16

    The topographic features of the extracelluar matrix (ECM) lay the foundation for cellular behavior. A novel biofabrication method using a digital-mirror device (DMD), called dynamic optical projection stereolithography (DOPsL) is demonstrated. This robust and versatile platform can generate complex biomimetic scaffolds within seconds. Such 3D scaffolds have promising potentials for studying cell interactions with microenvironments in vitro and in vivo.

  11. Fast 3D optical reconstruction in turbid media using spatially modulated light

    PubMed Central

    D’Andrea, Cosimo; Ducros, Nicolas; Bassi, Andrea; Arridge, Simon; Valentini, Gianluca

    2010-01-01

    A method to perform fast 3-D optical reconstruction, based on structured light, in thick samples is demonstrated and experimentally validated. The experimental and reconstruction procedure, based on Finite Elements Method, used to reconstruct absorbing heterogeneities, with arbitrary arrangement in space, is discussed. In particular we demonstrated that a 2D sampling of the source Fourier plane is required to improve the imaging capability. PMID:21258482

  12. Influence of surface roughness on nonlinear flow behaviors in 3D self-affine rough fractures: Lattice Boltzmann simulations

    NASA Astrophysics Data System (ADS)

    Wang, Min; Chen, Yi-Feng; Ma, Guo-Wei; Zhou, Jia-Qing; Zhou, Chuang-Bing

    2016-10-01

    This study investigates the impacts of surface roughness on the nonlinear fluid flow through three-dimensional (3D) self-affine rock fractures, whose original surface roughness is decomposed into primary roughness (i.e. the large-scale waviness of the fracture morphology) and secondary roughness (i.e. the small-scale unevenness) with a wavelet analysis technique. A 3D Lattice Boltzmann method (LBM) is adopted to predict the flow physics in rock fractures numerically created with and without consideration of the secondary roughness, respectively. The simulation results show that the primary roughness mostly controls the pressure distribution and fracture flow paths at a large scale, whereas the secondary roughness determines the nonlinear properties of the fluid flow at a local scale. As the pressure gradient increases, the secondary roughness enhances the local complexity of velocity distribution by generating and expanding the eddy flow and back flow regions in the vicinity of asperities. It was found that the Forchheimer's law characterizes well the nonlinear flow behavior in fractures of varying roughness. The inertial effects induced by the primary roughness differ only marginally in fractures with the roughness exponent varying from 0.5 to 0.8, and it is the secondary roughness that significantly enhances the nonlinear flow and leads to earlier onset of nonlinearity. Further examined were the effects of surface roughness on the transmissivity, hydraulic aperture and the tortuosity of flow paths, demonstrating again the dominant role of the secondary roughness, especially for the apparent transmissivity and the equivalent hydraulic aperture at high pressure gradient or high Reynolds number. The results may enhance our understanding of the role of surface roughness in the nonlinear flow behaviors in natural rock fractures.

  13. Performance of a commercial optical CT scanner and polymer gel dosimeters for 3-D dose verification

    SciTech Connect

    Xu, Y.; Wuu, C.-S.; Maryanski, Marek J.

    2004-11-01

    Performance analysis of a commercial three-dimensional (3-D) dose mapping system based on optical CT scanning of polymer gels is presented. The system consists of BANG{sup reg}3 polymer gels (MGS Research, Inc., Madison, CT), OCTOPUS{sup TM} laser CT scanner (MGS Research, Inc., Madison, CT), and an in-house developed software for optical CT image reconstruction and 3-D dose distribution comparison between the gel, film measurements and the radiation therapy treatment plans. Various sources of image noise (digitization, electronic, optical, and mechanical) generated by the scanner as well as optical uniformity of the polymer gel are analyzed. The performance of the scanner is further evaluated in terms of the reproducibility of the data acquisition process, the uncertainties at different levels of reconstructed optical density per unit length and the effects of scanning parameters. It is demonstrated that for BANG{sup registered}3 gel phantoms held in cylindrical plastic containers, the relative dose distribution can be reproduced by the scanner with an overall uncertainty of about 3% within approximately 75% of the radius of the container. In regions located closer to the container wall, however, the scanner generates erroneous optical density values that arise from the reflection and refraction of the laser rays at the interface between the gel and the container. The analysis of the accuracy of the polymer gel dosimeter is exemplified by the comparison of the gel/OCT-derived dose distributions with those from film measurements and a commercial treatment planning system (Cadplan, Varian Corporation, Palo Alto, CA) for a 6 cmx6 cm single field of 6 MV x rays and a 3-D conformal radiotherapy (3DCRT) plan. The gel measurements agree with the treatment plans and the film measurements within the '3%-or-2 mm' criterion throughout the usable, artifact-free central region of the gel volume. Discrepancies among the three data sets are analyzed.

  14. Computational-optical microscopy for 3D biological imaging beyond the diffraction limit

    NASA Astrophysics Data System (ADS)

    Grover, Ginni

    In recent years, super-resolution imaging has become an important fluorescent microscopy tool. It has enabled imaging of structures smaller than the optical diffraction limit with resolution less than 50 nm. Extension to high-resolution volume imaging has been achieved by integration with various optical techniques. In this thesis, development of a fluorescent microscope to enable high resolution, extended depth, three dimensional (3D) imaging is discussed; which is achieved by integration of computational methods with optical systems. In the first part of the thesis, point spread function (PSF) engineering for volume imaging is discussed. A class of PSFs, referred to as double-helix (DH) PSFs, is generated. The PSFs exhibit two focused spots in the image plane which rotate about the optical axis, encoding depth in rotation of the image. These PSFs extend the depth-of-field up to a factor of ˜5. Precision performance of the DH-PSFs, based on an information theoretical analysis, is compared with other 3D methods with conclusion that the DH-PSFs provide the best precision and the longest depth-of-field. Out of various possible DH-PSFs, a suitable PSF is obtained for super-resolution microscopy. The DH-PSFs are implemented in imaging systems, such as a microscope, with a special phase modulation at the pupil plane. Surface-relief elements which are polarization-insensitive and ˜90% light efficient are developed for phase modulation. The photon-efficient DH-PSF microscopes thus developed are used, along with optimal position estimation algorithms, for tracking and super-resolution imaging in 3D. Imaging at depths-of-field of up to 2.5 microm is achieved without focus scanning. Microtubules were imaged with 3D resolution of (6, 9, 39) nm, which is in close agreement with the theoretical limit. A quantitative study of co-localization of two proteins in volume was conducted in live bacteria. In the last part of the thesis practical aspects of the DH-PSF microscope are

  15. Simultaneous electrochemical and 3D optical imaging of silver nanoparticle oxidation

    NASA Astrophysics Data System (ADS)

    Batchelor-McAuley, Christopher; Martinez-Marrades, Ariadna; Tschulik, Kristina; Patel, Anisha N.; Combellas, Catherine; Kanoufi, Frédéric; Tessier, Gilles; Compton, Richard G.

    2014-03-01

    The oxidation of AgNPs at a thin-film gold electrode is simultaneously investigated via digital holography and electrochemistry. The use of holography allows, for the first time, the 3D visualization of the electrochemical interfacial region at a relatively high acquisition rate. It is demonstrated how the coupling of these two techniques provides complementary chemical information. The ensemble response of the oxidation of surface-adsorbed silver nanoparticles to AgCl is monitored electrochemically, whereas this process is difficult to observe optically. Conversely, the subsequent chemical dissolution of individual AgCl nanocrystals can be tracked optically due to the associated decrease in the scattered light intensity.

  16. Optically Trapped Surface-Enhanced Raman Probes Prepared by Silver Photoreduction to 3D Microstructures.

    PubMed

    Vizsnyiczai, Gaszton; Lestyán, Tamás; Joniova, Jaroslava; Aekbote, Badri L; Strejčková, Alena; Ormos, Pál; Miskovsky, Pavol; Kelemen, Lóránd; Bánó, Gregor

    2015-09-15

    3D microstructures partially covered by silver nanoparticles have been developed and tested for surface-enhanced Raman spectroscopy (SERS) in combination with optical tweezers. The microstructures made by two-photon polymerization of SU-8 photoresist were manipulated in a dual beam optical trap. The active area of the structures was covered by a SERS-active silver layer using chemically assisted photoreduction from silver nitrate solutions. Silver layers of different grain size distributions were created by changing the photoreduction parameters and characterized by scanning electron microscopy. The structures were tested by measuring the SERS spectra of emodin and hypericin.

  17. Characterization of a parallel beam CCD optical-CT apparatus for 3D radiation dosimetry

    NASA Astrophysics Data System (ADS)

    Krstajić, Nikola; Doran, Simon J.

    2006-12-01

    This paper describes the initial steps we have taken in establishing CCD based optical-CT as a viable alternative for 3-D radiation dosimetry. First, we compare the optical density (OD) measurements from a high quality test target and variable neutral density filter (VNDF). A modulation transfer function (MTF) of individual projections is derived for three positions of the sinusoidal test target within the scanning tank. Our CCD is then characterized in terms of its signal-to-noise ratio (SNR). Finally, a sample reconstruction of a scan of a PRESAGETM (registered trademark of Heuris Pharma, NJ, Skillman, USA.) dosimeter is given, demonstrating the capabilities of the apparatus.

  18. Characteristics of pore structures in Selma Chalk using dual FIB-SEM 3D imaging and Lattice Boltzmann Modeling

    NASA Astrophysics Data System (ADS)

    Yoon, H.; Dewers, T. A.

    2012-12-01

    Accurate prediction of coupled geophysical and chemical processes at the pore scale requires realistic representation of pore structures. This is especially true for chalk materials, where pore networks are small and complex, and often characterized at sub-micron scale. Common techniques such as X-ray microtomography, microscopic imaging, or mercury intrusion porosimetry often show a limit on determining pore throat distributions and seal analysis of such fine-grained rocks. Focused ion beam-scanning electron microscope (FIB-SEM) and laser scanning confocal microscopy methods are used for 3D imaging of nanometer-to-micron scale microcrack and pore distributions in samples of the Cretaceous Selma Group Chalk. The Selma Chalk is considered the seal for oil and gas fields in the Mississippi Interior Salt Basin and a proposed regional-scale seal identified for CO2 sequestration sites. A series of image analysis techniques is used to process raw images in order to recover both nano-scale pore structure and continuous fracture networks. We apply 3D imaging techniques in interpreting FIB-SEM binary data for characterizing geometric pore body and throat distributions and other topological properties, and lattice-Boltzmann method (LBM) for obtaining permeability at several different scales. In particular, comparison of primary flow paths obtained from 3D image analysis and LBM demonstrates that image analysis results may have too many equally plausible flow paths, compared to LBM results. Upscaling of permeability and LB multiphase flow results with image dataset will be discussed with emphasis on understanding microfracture-matrix interaction during multiphase flow, and seal analysis for geologic CO2 storage. This material is based upon work supported as part of the Center for Frontiers of Subsurface Energy Security, an Energy Frontier Research Center funded by the U.S. Department of Energy, Office of Science, Office of Basic Energy Sciences under Award Number DE-SC0001114

  19. Minimizing camera-eye optical aberrations during the 3D reconstruction of retinal structures

    NASA Astrophysics Data System (ADS)

    Aldana-Iuit, Javier; Martinez-Perez, M. Elena; Espinosa-Romero, Arturo; Diaz-Uribe, Rufino

    2010-05-01

    3D reconstruction of blood vessels is a powerful visualization tool for physicians, since it allows them to refer to qualitative representation of their subject of study. In this paper we propose a 3D reconstruction method of retinal vessels from fundus images. The reconstruction method propose herein uses images of the same retinal structure in epipolar geometry. Images are preprocessed by RISA system for segmenting blood vessels and obtaining feature points for correspondences. The correspondence points process is solved using correlation. The LMedS analysis and Graph Transformation Matching algorithm are used for outliers suppression. Camera projection matrices are computed with the normalized eight point algorithm. Finally, we retrieve 3D position of the retinal tree points by linear triangulation. In order to increase the power of visualization, 3D tree skeletons are represented by surfaces via generalized cylinders whose radius correspond to morphological measurements obtained by RISA. In this paper the complete calibration process including the fundus camera and the optical properties of the eye, the so called camera-eye system is proposed. On one hand, the internal parameters of the fundus camera are obtained by classical algorithms using a reference pattern. On the other hand, we minimize the undesirable efects of the aberrations induced by the eyeball optical system assuming that contact enlarging lens corrects astigmatism, spherical and coma aberrations are reduced changing the aperture size and eye refractive errors are suppressed adjusting camera focus during image acquisition. Evaluation of two self-calibration proposals and results of 3D blood vessel surface reconstruction are presented.

  20. Active optical system for advanced 3D surface structuring by laser remelting

    NASA Astrophysics Data System (ADS)

    Pütsch, O.; Temmler, A.; Stollenwerk, J.; Willenborg, E.; Loosen, P.

    2015-03-01

    Structuring by laser remelting enables completely new possibilities for designing surfaces since material is redistributed but not wasted. In addition to technological advantages, cost and time benefits yield from shortened process times, the avoidance of harmful chemicals and the elimination of subsequent finishing steps such as cleaning and polishing. The functional principle requires a completely new optical machine technology that maintains the spatial and temporal superposition and manipulation of three different laser beams emitted from two laser sources of different wavelength. The optical system has already been developed and demonstrated for the processing of flat samples of hot and cold working steel. However, since particularly the structuring of 3D-injection molds represents an application example of high innovation potential, the optical system has to take into account the elliptical beam geometry that occurs when the laser beams irradiate a curved surface. To take full advantage of structuring by remelting for the processing of 3D surfaces, additional optical functionality, called EPS (elliptical pre-shaping) has to be integrated into the existing set-up. The development of the beam shaping devices not only requires the analysis of the mechanisms of the beam projection but also a suitable optical design. Both aspects are discussed in this paper.

  1. Intrinsic Localized Modes in Optical Photonic Lattices and Arrays

    NASA Astrophysics Data System (ADS)

    Christodoulides, Demetrios

    Discretizing light behavior requires optical elements that can confine optical energy at distinct sites. One possible scenario in implementing such arrangements is to store energy within low loss high Q-microcavities and then allow photon exchange between such components in time. This scheme requires high-contrast dielectric elements that became available with the advent of photonic crystal technologies. Another possible avenue where such light discretization can be directly observed and studied is that based on evanescently coupled waveguide arrays. As indicated in several studies, discrete systems open up whole new directions in terms of modifying light transport properties. One such example is that of discrete solitons. By nature, discrete solitons represent self-trapped wavepackets in nonlinear periodic structures and result from the interplay between lattice diffraction (or dispersion) and material nonlinearity. In optics, this class of self-localized states has been successfully observed in both one- and two-dimensional nonlinear waveguide arrays. In recent years such photonic lattices have been implemented or induced in a variety of material systems, including those with cubic (Kerr), quadratic, photorefractive, and liquid-crystal nonlinearities. In all cases the underlying periodicity or discreteness can lead to new families of optical solitons that have no counterpart whatsoever in continuous systems. Interestingly, these results paved the way for observations in other physical systems obeying similar evolution equations like Bose-Einstein condensates. New developments in laser writing ultrashort femtosecond laser pulses, now allow the realization of all-optical switching networks in fully 3D environments using nonlinear discrete optics. Using this approach all-optical routing can be achieved using blocking operations. The spatio-temporal evolution of optical pulses in both normally and anomalously dispersive arrays can lead to novel schemes for mode

  2. A joint estimation detection of Glaucoma progression in 3D spectral domain optical coherence tomography optic nerve head images

    NASA Astrophysics Data System (ADS)

    Belghith, Akram; Bowd, Christopher; Weinreb, Robert N.; Zangwill, Linda M.

    2014-03-01

    Glaucoma is an ocular disease characterized by distinctive changes in the optic nerve head (ONH) and visual field. Glaucoma can strike without symptoms and causes blindness if it remains without treatment. Therefore, early disease detection is important so that treatment can be initiated and blindness prevented. In this context, important advances in technology for non-invasive imaging of the eye have been made providing quantitative tools to measure structural changes in ONH topography, an essential element for glaucoma detection and monitoring. 3D spectral domain optical coherence tomography (SD-OCT), an optical imaging technique, has been commonly used to discriminate glaucomatous from healthy subjects. In this paper, we present a new framework for detection of glaucoma progression using 3D SD-OCT images. In contrast to previous works that the retinal nerve fiber layer (RNFL) thickness measurement provided by commercially available spectral-domain optical coherence tomograph, we consider the whole 3D volume for change detection. To integrate a priori knowledge and in particular the spatial voxel dependency in the change detection map, we propose the use of the Markov Random Field to handle a such dependency. To accommodate the presence of false positive detection, the estimated change detection map is then used to classify a 3D SDOCT image into the "non-progressing" and "progressing" glaucoma classes, based on a fuzzy logic classifier. We compared the diagnostic performance of the proposed framework to existing methods of progression detection.

  3. Modified Iterated perturbation theory in the strong coupling regime and its application to the 3d FCC lattice

    NASA Astrophysics Data System (ADS)

    Arsenault, Louis-François; Sémon, Patrick; Shastry, B. Sriram; Tremblay, A.-M. S.

    2012-02-01

    The Dynamical Mean-Field theory(DMFT) approach to the Hubbard model requires a method to solve the problem of a quantum impurity in a bath of non-interacting electrons. Iterated Perturbation Theory(IPT)[1] has proven its effectiveness as a solver in many cases of interest. Based on general principles and on comparisons with an essentially exact Continuous-Time Quantum Monte Carlo (CTQMC)[2], here we show that the standard implementation of IPT fails when the interaction is much larger than the bandwidth. We propose a slight modification to the IPT algorithm by requiring that double occupancy calculated with IPT gives the correct value. We call this method IPT-D. We show how this approximate impurity solver compares with respect to CTQMC. We consider a face centered cubic lattice(FCC) in 3d for different physical properties. We also use IPT-D to study the thermopower using two recently proposed approximations[3]S^* and SKelvin that do not require analytical continuation and show how thermopower is essentially the entropy per particle in the incoherent regime but not in the coherent one.[1]H.Kajueter et al. Phys. Rev. Lett. 77, 131(1996)[2]P. Werner, et al. Phys. Rev. Lett. 97, 076405(2006)[3]B.S. Sriram Shastry Rep. Prog. Phys. 72 016501(2009)

  4. Nuclear spin effects in optical lattice clocks

    SciTech Connect

    Boyd, Martin M.; Zelevinsky, Tanya; Ludlow, Andrew D.; Blatt, Sebastian; Zanon-Willette, Thomas; Foreman, Seth M.; Ye Jun

    2007-08-15

    We present a detailed experimental and theoretical study of the effect of nuclear spin on the performance of optical lattice clocks. With a state-mixing theory including spin-orbit and hyperfine interactions, we describe the origin of the {sup 1}S{sub 0}-{sup 3}P{sub 0} clock transition and the differential g factor between the two clock states for alkaline-earth-metal(-like) atoms, using {sup 87}Sr as an example. Clock frequency shifts due to magnetic and optical fields are discussed with an emphasis on those relating to nuclear structure. An experimental determination of the differential g factor in {sup 87}Sr is performed and is in good agreement with theory. The magnitude of the tensor light shift on the clock states is also explored experimentally. State specific measurements with controlled nuclear spin polarization are discussed as a method to reduce the nuclear spin-related systematic effects to below 10{sup -17} in lattice clocks.

  5. Hybrid plasmonic lattices with tunable magneto-optical activity.

    PubMed

    Kataja, Mikko; Pourjamal, Sara; Maccaferri, Nicolò; Vavassori, Paolo; Hakala, Tommi K; Huttunen, Mikko J; Törmä, Päivi; van Dijken, Sebastiaan

    2016-02-22

    We report on the optical and magneto-optical response of hybrid plasmonic lattices that consist of pure nickel and gold nanoparticles in a checkerboard arrangement. Diffractive far-field coupling between the individual emitters of the lattices results in the excitation of two orthogonal surface lattice resonance modes. Local analyses of the radiation fields indicate that both the nickel and gold nanoparticles contribute to these collective resonances and, thereby, to the magneto-optical activity of the hybrid arrays. The strong effect of noble metal nanoparticles on the magneto-optical response of hybrid lattices opens up new avenues for the realization of sensitive and tunable magneto-plasmonic nanostructures. PMID:26907022

  6. Stereoscopic 3D display with dynamic optical correction for recovering from asthenopia

    NASA Astrophysics Data System (ADS)

    Shibata, Takashi; Kawai, Takashi; Otsuki, Masaki; Miyake, Nobuyuki; Yoshihara, Yoshihiro; Iwasaki, Tsuneto

    2005-03-01

    The purpose of this study was to consider a practical application of a newly developed stereoscopic 3-D display that solves the problem of discrepancy between accommodation and convergence. The display uses dynamic optical correction to reduce the discrepancy, and can present images as if they are actually remote objects. The authors thought the display may assist in recovery from asthenopia, which is often caused when the eyes focus on a nearby object for a long time, such as in VDT (Visual Display Terminal) work. In general, recovery from asthenopia, and especially accommodative asthenopia, is achieved by focusing on distant objects. In order to verify this hypothesis, the authors performed visual acuity tests using Landolt rings before and after presenting stereoscopic 3-D images, and evaluated the degree of recovery from asthenopia. The experiment led to three main conclusions: (1) Visual acuity rose after viewing stereoscopic 3-D images on the developed display. (2) Recovery from asthenopia was particularly effective for the dominant eye in comparison with the other eye. (3) Interviews with the subjects indicated that the Landolt rings were particularly clear after viewing the stereoscopic 3-D images.

  7. Examination of asthenopia recovery using stereoscopic 3D display with dynamic optical correction

    NASA Astrophysics Data System (ADS)

    Shibata, Takashi; Kawai, Takashi; Ohta, Keiji; Lee, JaeLin; Otsuki, Masaki; Miyake, Nobuyuki; Yoshihara, Yoshihiro; Iwasaki, Tsuneto

    2006-02-01

    A common cause of asthenopia is viewing objects from a short distance, as is the case when working at a VDT (Visual Display Terminal). In general, recovery from asthenopia, especially accommodative asthenopia, is aided by looking into the distance. The authors have developed a stereoscopic 3-D display with dynamic optical correction that may reduce asthenopia. The display does this by reducing the discrepancy between accommodation and convergence, thereby presenting images as if they were actually in the distance. The results of visual acuity tests given before and after presenting stereoscopic 3-D images with this display show a tendency towards less asthenopia. In this study, the authors developed a refraction feedback function that makes the viewer's distance vision more effective when viewing stereoscopic 3-D images on the this display. Using this function, refraction is fed back during viewing and the viewer gradually acquires distance vision. The results of the study suggest that stereoscopic 3-D images are more effective than 2-D images for recovery from asthenopia.

  8. A comprehensive evaluation of the PRESAGE∕optical-CT 3D dosimetry system

    PubMed Central

    Sakhalkar, H. S.; Adamovics, J.; Ibbott, G.; Oldham, M.

    2009-01-01

    This work presents extensive investigations to evaluate the robustness (intradosimeter consistency and temporal stability of response), reproducibility, precision, and accuracy of a relatively new 3D dosimetry system comprising a leuco-dye doped plastic 3D dosimeter (PRESAGE) and a commercial optical-CT scanner (OCTOPUS 5× scanner from MGS Research, Inc). Four identical PRESAGE 3D dosimeters were created such that they were compatible with the Radiologic Physics Center (RPC) head-and-neck (H&N) IMRT credentialing phantom. Each dosimeter was irradiated with a rotationally symmetric arrangement of nine identical small fields (1×3 cm2) impinging on the flat circular face of the dosimeter. A repetitious sequence of three dose levels (4, 2.88, and 1.28 Gy) was delivered. The rotationally symmetric treatment resulted in a dose distribution with high spatial variation in axial planes but only gradual variation with depth along the long axis of the dosimeter. The significance of this treatment was that it facilitated accurate film dosimetry in the axial plane, for independent verification. Also, it enabled rigorous evaluation of robustness, reproducibility and accuracy of response, at the three dose levels. The OCTOPUS 5× commercial scanner was used for dose readout from the dosimeters at daily time intervals. The use of improved optics and acquisition technique yielded substantially improved noise characteristics (reduced to ∼2%) than has been achieved previously. Intradosimeter uniformity of radiochromic response was evaluated by calculating a 3D gamma comparison between each dosimeter and axially rotated copies of the same dosimeter. This convenient technique exploits the rotational symmetry of the distribution. All points in the gamma comparison passed a 2% difference, 1 mm distance-to-agreement criteria indicating excellent intradosimeter uniformity even at low dose levels. Postirradiation, the dosimeters were all found to exhibit a slight increase in opaqueness

  9. A comprehensive evaluation of the PRESAGE/optical-CT 3D dosimetry system.

    PubMed

    Sakhalkar, H S; Adamovics, J; Ibbott, G; Oldham, M

    2009-01-01

    This work presents extensive investigations to evaluate the robustness (intradosimeter consistency and temporal stability of response), reproducibility, precision, and accuracy of a relatively new 3D dosimetry system comprising a leuco-dye doped plastic 3D dosimeter (PRESAGE) and a commercial optical-CT scanner (OCTOPUS 5x scanner from MGS Research, Inc). Four identical PRESAGE 3D dosimeters were created such that they were compatible with the Radiologic Physics Center (RPC) head-and-neck (H&N) IMRT credentialing phantom. Each dosimeter was irradiated with a rotationally symmetric arrangement of nine identical small fields (1 x 3 cm2) impinging on the flat circular face of the dosimeter. A repetitious sequence of three dose levels (4, 2.88, and 1.28 Gy) was delivered. The rotationally symmetric treatment resulted in a dose distribution with high spatial variation in axial planes but only gradual variation with depth along the long axis of the dosimeter. The significance of this treatment was that it facilitated accurate film dosimetry in the axial plane, for independent verification. Also, it enabled rigorous evaluation of robustness, reproducibility and accuracy of response, at the three dose levels. The OCTOPUS 5x commercial scanner was used for dose readout from the dosimeters at daily time intervals. The use of improved optics and acquisition technique yielded substantially improved noise characteristics (reduced to approximately 2%) than has been achieved previously. Intradosimeter uniformity of radiochromic response was evaluated by calculating a 3D gamma comparison between each dosimeter and axially rotated copies of the same dosimeter. This convenient technique exploits the rotational symmetry of the distribution. All points in the gamma comparison passed a 2% difference, 1 mm distance-to-agreement criteria indicating excellent intradosimeter uniformity even at low dose levels. Postirradiation, the dosimeters were all found to exhibit a slight increase in

  10. A comprehensive evaluation of the PRESAGE/optical-CT 3D dosimetry system

    SciTech Connect

    Sakhalkar, H. S.; Adamovics, J.; Ibbott, G.; Oldham, M.

    2009-01-15

    This work presents extensive investigations to evaluate the robustness (intradosimeter consistency and temporal stability of response), reproducibility, precision, and accuracy of a relatively new 3D dosimetry system comprising a leuco-dye doped plastic 3D dosimeter (PRESAGE) and a commercial optical-CT scanner (OCTOPUS 5x scanner from MGS Research, Inc). Four identical PRESAGE 3D dosimeters were created such that they were compatible with the Radiologic Physics Center (RPC) head-and-neck (H and N) IMRT credentialing phantom. Each dosimeter was irradiated with a rotationally symmetric arrangement of nine identical small fields (1x3 cm{sup 2}) impinging on the flat circular face of the dosimeter. A repetitious sequence of three dose levels (4, 2.88, and 1.28 Gy) was delivered. The rotationally symmetric treatment resulted in a dose distribution with high spatial variation in axial planes but only gradual variation with depth along the long axis of the dosimeter. The significance of this treatment was that it facilitated accurate film dosimetry in the axial plane, for independent verification. Also, it enabled rigorous evaluation of robustness, reproducibility and accuracy of response, at the three dose levels. The OCTOPUS 5x commercial scanner was used for dose readout from the dosimeters at daily time intervals. The use of improved optics and acquisition technique yielded substantially improved noise characteristics (reduced to {approx}2%) than has been achieved previously. Intradosimeter uniformity of radiochromic response was evaluated by calculating a 3D gamma comparison between each dosimeter and axially rotated copies of the same dosimeter. This convenient technique exploits the rotational symmetry of the distribution. All points in the gamma comparison passed a 2% difference, 1 mm distance-to-agreement criteria indicating excellent intradosimeter uniformity even at low dose levels. Postirradiation, the dosimeters were all found to exhibit a slight increase in

  11. 3D optical printing of piezoelectric nanoparticle-polymer composite materials.

    PubMed

    Kim, Kanguk; Zhu, Wei; Qu, Xin; Aaronson, Chase; McCall, William R; Chen, Shaochen; Sirbuly, Donald J

    2014-10-28

    Here we demonstrate that efficient piezoelectric nanoparticle-polymer composite materials can be optically printed into three-dimensional (3D) microstructures using digital projection printing. Piezoelectric polymers were fabricated by incorporating barium titanate (BaTiO3, BTO) nanoparticles into photoliable polymer solutions such as polyethylene glycol diacrylate and exposing to digital optical masks that could be dynamically altered to generate user-defined 3D microstructures. To enhance the mechanical-to-electrical conversion efficiency of the composites, the BTO nanoparticles were chemically modified with acrylate surface groups, which formed direct covalent linkages with the polymer matrix under light exposure. The composites with a 10% mass loading of the chemically modified BTO nanoparticles showed piezoelectric coefficients (d(33)) of ∼ 40 pC/N, which were over 10 times larger than composites synthesized with unmodified BTO nanoparticles and over 2 times larger than composites containing unmodified BTO nanoparticles and carbon nanotubes to boost mechanical stress transfer efficiencies. These results not only provide a tool for fabricating 3D piezoelectric polymers but lay the groundwork for creating highly efficient piezoelectric polymer materials via nanointerfacial tuning.

  12. Changes in quantitative 3D shape features of the optic nerve head associated with age

    NASA Astrophysics Data System (ADS)

    Christopher, Mark; Tang, Li; Fingert, John H.; Scheetz, Todd E.; Abramoff, Michael D.

    2013-02-01

    Optic nerve head (ONH) structure is an important biological feature of the eye used by clinicians to diagnose and monitor progression of diseases such as glaucoma. ONH structure is commonly examined using stereo fundus imaging or optical coherence tomography. Stereo fundus imaging provides stereo views of the ONH that retain 3D information useful for characterizing structure. In order to quantify 3D ONH structure, we applied a stereo correspondence algorithm to a set of stereo fundus images. Using these quantitative 3D ONH structure measurements, eigen structures were derived using principal component analysis from stereo images of 565 subjects from the Ocular Hypertension Treatment Study (OHTS). To evaluate the usefulness of the eigen structures, we explored associations with the demographic variables age, gender, and race. Using regression analysis, the eigen structures were found to have significant (p < 0.05) associations with both age and race after Bonferroni correction. In addition, classifiers were constructed to predict the demographic variables based solely on the eigen structures. These classifiers achieved an area under receiver operating characteristic curve of 0.62 in predicting a binary age variable, 0.52 in predicting gender, and 0.67 in predicting race. The use of objective, quantitative features or eigen structures can reveal hidden relationships between ONH structure and demographics. The use of these features could similarly allow specific aspects of ONH structure to be isolated and associated with the diagnosis of glaucoma, disease progression and outcomes, and genetic factors.

  13. Development of scanning laser sensor for underwater 3D imaging with the coaxial optics

    NASA Astrophysics Data System (ADS)

    Ochimizu, Hideaki; Imaki, Masaharu; Kameyama, Shumpei; Saito, Takashi; Ishibashi, Shoujirou; Yoshida, Hiroshi

    2014-06-01

    We have developed the scanning laser sensor for underwater 3-D imaging which has the wide scanning angle of 120º (Horizontal) x 30º (Vertical) with the compact size of 25 cm diameter and 60 cm long. Our system has a dome lens and a coaxial optics to realize both the wide scanning angle and the compactness. The system also has the feature in the sensitivity time control (STC) circuit, in which the receiving gain is increased according to the time of flight. The STC circuit contributes to detect a small signal by suppressing the unwanted signals backscattered by marine snows. We demonstrated the system performance in the pool, and confirmed the 3-D imaging with the distance of 20 m. Furthermore, the system was mounted on the autonomous underwater vehicle (AUV), and demonstrated the seafloor mapping at the depth of 100 m in the ocean.

  14. Optical absorption enhancement in 3D nanofibers coated on polymer substrate for photovoltaic devices.

    PubMed

    Kiani, Amirkianoosh; Venkatakrishnan, Krishnan; Tan, Bo

    2015-06-01

    Recent research in the field of photovoltaics has shown that polymer solar cells have great potential to provide low-cost, lightweight and flexible electronic devices to harvest solar energy. In this paper, we propose a new method for the generation of three-dimensional nanofibers coated on polymer substrate induced by femtosecond laser pulses. In this new method, a thin layer of polymer is irradiated by megahertz femtosecond laser pulses under ambient conditions, and a thin fibrous layer is generated on top of the polymer substrate. This method is single step; no additional materials are added, and the layers of the three-dimensional (3D) polymer nanofibrous structures are grown on top of the substrate after laser irradiation. Light spectroscopy results show significant enhancement of light absorption in the generated 3D nanofibrous layers of polymer. Finally, we suggest how to maximize the light trapping and optical absorption of the generated nanofiber cells by optimizing the laser parameters. PMID:26072881

  15. Intrathoracic tumour motion estimation from CT imaging using the 3D optical flow method

    NASA Astrophysics Data System (ADS)

    Guerrero, Thomas; Zhang, Geoffrey; Huang, Tzung-Chi; Lin, Kang-Ping

    2004-09-01

    The purpose of this work was to develop and validate an automated method for intrathoracic tumour motion estimation from breath-hold computed tomography (BH CT) imaging using the three-dimensional optical flow method (3D OFM). A modified 3D OFM algorithm provided 3D displacement vectors for each voxel which were used to map tumour voxels on expiration BH CT onto inspiration BH CT images. A thoracic phantom and simulated expiration/inspiration BH CT pairs were used for validation. The 3D OFM was applied to the measured inspiration and expiration BH CT images from one lung cancer and one oesophageal cancer patient. The resulting displacements were plotted in histogram format and analysed to provide insight regarding the tumour motion. The phantom tumour displacement was measured as 1.20 and 2.40 cm with full-width at tenth maximum (FWTM) for the distribution of displacement estimates of 0.008 and 0.006 cm, respectively. The maximum error of any single voxel's motion estimate was 1.1 mm along the z-dimension or approximately one-third of the z-dimension voxel size. The simulated BH CT pairs revealed an rms error of less than 0.25 mm. The displacement of the oesophageal tumours was nonuniform and up to 1.4 cm, this was a new finding. A lung tumour maximum displacement of 2.4 cm was found in the case evaluated. In conclusion, 3D OFM provided an accurate estimation of intrathoracic tumour motion, with estimated errors less than the voxel dimension in a simulated motion phantom study. Surprisingly, oesophageal tumour motion was large and nonuniform, with greatest motion occurring at the gastro-oesophageal junction. Presented at The IASTED Second International Conference on Biomedical Engineering (BioMED 2004), Innsbruck, Austria, 16-18 February 2004.

  16. Three-Axis Distributed Fiber Optic Strain Measurement in 3D Woven Composite Structures

    NASA Technical Reports Server (NTRS)

    Castellucci, Matt; Klute, Sandra; Lally, Evan M.; Froggatt, Mark E.; Lowry, David

    2013-01-01

    Recent advancements in composite materials technologies have broken further from traditional designs and require advanced instrumentation and analysis capabilities. Success or failure is highly dependent on design analysis and manufacturing processes. By monitoring smart structures throughout manufacturing and service life, residual and operational stresses can be assessed and structural integrity maintained. Composite smart structures can be manufactured by integrating fiber optic sensors into existing composite materials processes such as ply layup, filament winding and three-dimensional weaving. In this work optical fiber was integrated into 3D woven composite parts at a commercial woven products manufacturing facility. The fiber was then used to monitor the structures during a VARTM manufacturing process, and subsequent static and dynamic testing. Low cost telecommunications-grade optical fiber acts as the sensor using a high resolution commercial Optical Frequency Domain Reflectometer (OFDR) system providing distributed strain measurement at spatial resolutions as low as 2mm. Strain measurements using the optical fiber sensors are correlated to resistive strain gage measurements during static structural loading. Keywords: fiber optic, distributed strain sensing, Rayleigh scatter, optical frequency domain reflectometry

  17. Focus Variation - A New Technology for High Resolution Optical 3D Surface Metrology

    NASA Astrophysics Data System (ADS)

    Scherer, S.

    2009-04-01

    Focus Variation - A New Technology for High Resolution Optical 3D Surface Metrology S. Scherer1, E. Cristea1, O. Huber1, A. Krenn1 1 ALICONA GmbH Graz, Austria The need for increasing accuracy is a characteristic of all geo-applications, and hence of the instruments contributing to obtaining relevant data. Small and fine sensors are being developed, measuring different parameters of our geosystem and requiring continuous validation and calibration. These sensors have often very small components (fine sensors able to sense dust, atmospheric water vapour characteristics, pressure change, gravimeters, satellite micro-components), showing complex topographies including steep flanks and having varying reflective properties. In order to get valid and reliable results, quality assurance of these instruments and sensors is required. The optical technology Focus-Variation, developed by Alicona and added in the latest draft of the upcoming ISO standard 25178, provides high resolution 3D surface metrology even at those complex topographies. The technique of Focus-Variation combines the small depth of focus of an optical system with vertical scanning to provide topographical and color information from the variation of focus. It is used for high-resolution optical 3D surface measurements. The traceable and repeatable measurement results are further being used for calibration and validation purposes. Some of the characteristics of the technology are: - Measurement of instruments / samples with steep flanks up to 80° - Measurement of materials with strongly varying reflection properties - Measurement of surfaces presenting fine (from 10nm) or strong roughness Here, we present the operating principle and possible applications of the optical 3D measurement system "InfiniteFocus", which is based on the technology of Focus-Variation and used for quality assurance in the lab and in production. With the vertical resolution of up to 10nm, InfiniteFocus yields meaningful form and

  18. Extended volume and surface scatterometer for optical characterization of 3D-printed elements

    NASA Astrophysics Data System (ADS)

    Dannenberg, Florian; Uebeler, Denise; Weiß, Jürgen; Pescoller, Lukas; Weyer, Cornelia; Hahlweg, Cornelius

    2015-09-01

    The use of 3d printing technology seems to be a promising way for low cost prototyping, not only of mechanical, but also of optical components or systems. It is especially useful in applications where customized equipment repeatedly is subject to immediate destruction, as in experimental detonics and the like. Due to the nature of the 3D-printing process, there is a certain inner texture and therefore inhomogeneous optical behaviour to be taken into account, which also indicates mechanical anisotropy. Recent investigations are dedicated to quantification of optical properties of such printed bodies and derivation of corresponding optimization strategies for the printing process. Beside mounting, alignment and illumination means, also refractive and reflective elements are subject to investigation. The proposed measurement methods are based on an imaging nearfield scatterometer for combined volume and surface scatter measurements as proposed in previous papers. In continuation of last year's paper on the use of near field imaging, which basically is a reflective shadowgraph method, for characterization of glossy surfaces like printed matter or laminated material, further developments are discussed. The device has been extended for observation of photoelasticity effects and therefore homogeneity of polarization behaviour. A refined experimental set-up is introduced. Variation of plane of focus and incident angle are used for separation of various the images of the layers of the surface under test, cross and parallel polarization techniques are applied. Practical examples from current research studies are included.

  19. Landau Levels in Strained Optical Lattices.

    PubMed

    Tian, Binbin; Endres, Manuel; Pekker, David

    2015-12-01

    We propose a hexagonal optical lattice system with spatial variations in the hopping matrix elements. Just like in the valley Hall effect in strained graphene, for atoms near the Dirac points the variations in the hopping matrix elements can be described by a pseudomagnetic field and result in the formation of Landau levels. We show that the pseudomagnetic field leads to measurable experimental signatures in momentum resolved Bragg spectroscopy, Bloch oscillations, cyclotron motion, and quantization of in situ densities. Our proposal can be realized by a slight modification of existing experiments. In contrast to previous methods, pseudomagnetic fields are realized in a completely static system avoiding common heating effects and therefore opening the door to studying interaction effects in Landau levels with cold atoms.

  20. Spatial entanglement of bosons in optical lattices.

    PubMed

    Cramer, M; Bernard, A; Fabbri, N; Fallani, L; Fort, C; Rosi, S; Caruso, F; Inguscio, M; Plenio, M B

    2013-01-01

    Entanglement is a fundamental resource for quantum information processing, occurring naturally in many-body systems at low temperatures. The presence of entanglement and, in particular, its scaling with the size of system partitions underlies the complexity of quantum many-body states. The quantitative estimation of entanglement in many-body systems represents a major challenge, as it requires either full-state tomography, scaling exponentially in the system size, or the assumption of unverified system characteristics such as its Hamiltonian or temperature. Here we adopt recently developed approaches for the determination of rigorous lower entanglement bounds from readily accessible measurements and apply them in an experiment of ultracold interacting bosons in optical lattices of ~10(5) sites. We then study the behaviour of spatial entanglement between the sites when crossing the superfluid-Mott insulator transition and when varying temperature. This constitutes the first rigorous experimental large-scale entanglement quantification in a scalable quantum simulator.

  1. Detecting multiatomic composite states in optical lattices

    NASA Astrophysics Data System (ADS)

    Kuklov, Anatoly; Moritz, Henning

    2007-01-01

    We propose and discuss methods for detecting quasimolecular complexes which are expected to form in strongly interacting optical lattice systems. Particular emphasis is placed on the detection of composite fermions forming in Bose-Fermi mixtures. We argue that, as an indirect indication of the composite fermions and a generic consequence of strong interactions, periodic correlations must appear in the atom shot noise of bosonic absorption images, similar to the bosonic Mott insulator [S. Fölling , Nature (London) 434, 481 (2005)]. The composites can also be detected directly and their quasimomentum distribution measured. This method—an extension of the technique of noise correlation interferometry [E. Altman , Phys. Rev. A 79, 013603 (2004)]—relies on measuring higher order correlations between the bosonic and fermionic shot noise in the absorption images. However, it fails above a certain number of the constituents due to a dramatic increase of uncorrelated noise.

  2. Arnold diffusion in a driven optical lattice.

    PubMed

    Boretz, Yingyue; Reichl, L E

    2016-03-01

    The effect of time-periodic forces on matter has been a topic of growing interest since the advent of lasers. It is known that dynamical systems with 2.5 or more degrees of freedom are intrinsically unstable. As a consequence, time-periodic driven systems can experience large excursions in energy. We analyze the classical and quantum dynamics of rubidium atoms confined to a time-periodic optical lattice with 2.5 degrees of freedom. When the laser polarizations are orthogonal, the system consists of two 1.5 uncoupled dynamical systems. When laser polarizations are turned away from orthogonal, an Arnold web forms and the dynamics undergoes a fundamental change. For parallel polarizations, we find huge random excursions in the rubidium atom energies and significant entanglement of energies in the quantum dynamics. PMID:27078351

  3. Fiber optic vibration sensor for high-power electric machines realized using 3D printing technology

    NASA Astrophysics Data System (ADS)

    Igrec, Bojan; Bosiljevac, Marko; Sipus, Zvonimir; Babic, Dubravko; Rudan, Smiljko

    2016-03-01

    The objective of this work was to demonstrate a lightweight and inexpensive fiber-optic vibration sensor, built using 3D printing technology, for high-power electric machines and similar applications. The working principle is based on modulating the light intensity using a blade attached to a bendable membrane. The sensor prototype was manufactured using PolyJet Matrix technology with DM 8515 Grey 35 Polymer. The sensor shows linear response, expected bandwidth (< 150 Hz), and from our measurements we estimated the damping ratio for used polymer to be ζ ≍ 0.019. The developed prototype is simple to assemble, adjust, calibrate and repair.

  4. Ultra-compact on-chip LED collimation optics by 3D femtosecond direct laser writing.

    PubMed

    Thiele, Simon; Gissibl, Timo; Giessen, Harald; Herkommer, Alois M

    2016-07-01

    By using two-photon lithographic 3D printing, we demonstrate additive manufacturing of a dielectric concentrator directly on a LED chip. With a size of below 200 μm in diameter and length, light output is increased by a factor of 6.2 in collimation direction, while the emission half-angle is reduced by 50%. We measure excellent form fidelity and irradiance patterns close to simulation. Additionally, a more complex shape design is presented, which exhibits a nonconventional triangular illumination pattern. The introduced method features exceptional design freedoms which can be used to tailor high-quality miniature illumination optics for specific lighting tasks, for example, endoscopy. PMID:27367093

  5. 3D imaging of translucent media with a plenoptic sensor based on phase space optics

    NASA Astrophysics Data System (ADS)

    Zhang, Xuanzhe; Shu, Bohong; Du, Shaojun

    2015-05-01

    Traditional stereo imaging technology is not working for dynamical translucent media, because there are no obvious characteristic patterns on it and it's not allowed using multi-cameras in most cases, while phase space optics can solve the problem, extracting depth information directly from "space-spatial frequency" distribution of the target obtained by plenoptic sensor with single lens. This paper discussed the presentation of depth information in phase space data, and calculating algorithms with different transparency. A 3D imaging example of waterfall was given at last.

  6. 3D optical sectioning with a new hyperspectral confocal fluorescence imaging system.

    SciTech Connect

    Nieman, Linda T.; Sinclair, Michael B.; Davidson, George S.; Van Benthem, Mark Hilary; Haaland, David Michael; Timlin, Jerilyn Ann; Sasaki, Darryl Yoshio; Bachand, George David; Jones, Howland D. T.

    2007-02-01

    A novel hyperspectral fluorescence microscope for high-resolution 3D optical sectioning of cells and other structures has been designed, constructed, and used to investigate a number of different problems. We have significantly extended new multivariate curve resolution (MCR) data analysis methods to deconvolve the hyperspectral image data and to rapidly extract quantitative 3D concentration distribution maps of all emitting species. The imaging system has many advantages over current confocal imaging systems including simultaneous monitoring of numerous highly overlapped fluorophores, immunity to autofluorescence or impurity fluorescence, enhanced sensitivity, and dramatically improved accuracy, reliability, and dynamic range. Efficient data compression in the spectral dimension has allowed personal computers to perform quantitative analysis of hyperspectral images of large size without loss of image quality. We have also developed and tested software to perform analysis of time resolved hyperspectral images using trilinear multivariate analysis methods. The new imaging system is an enabling technology for numerous applications including (1) 3D composition mapping analysis of multicomponent processes occurring during host-pathogen interactions, (2) monitoring microfluidic processes, (3) imaging of molecular motors and (4) understanding photosynthetic processes in wild type and mutant Synechocystis cyanobacteria.

  7. Polymer optical fibers integrated directly into 3D orthogonal woven composites for sensing

    NASA Astrophysics Data System (ADS)

    Hamouda, Tamer; Seyam, Abdel-Fattah M.; Peters, Kara

    2015-02-01

    This study demonstrates that standard polymer optical fibers (POF) can be directly integrated into composites from 3D orthogonal woven preforms during the weaving process and then serve as in-situ sensors to detect damage due to bending or impact loads. Different composite samples with embedded POF were fabricated of 3D orthogonal woven composites with different parameters namely number of y-/x-layers and x-yarn density. The signal of POF was not affected significantly by the preform structure. During application of resin using VARTM technique, significant drop in backscattering level was observed due to pressure caused by vacuum on the embedded POF. Measurements of POF signal while in the final composites after resin cure indicated that the backscattering level almost returned to the original level of un-embedded POF. The POF responded to application of bending and impact loads to the composite with a reduction in the backscattering level. The backscattering level almost returned back to its original level after removing the bending load until damage was present in the composite. Similar behavior occurred due to impact events. As the POF itself is used as the sensor and can be integrated throughout the composite, large sections of future 3D woven composite structures could be monitored without the need for specialized sensors or complex instrumentation.

  8. Diffractive 3D XUV optics at Helmholtz-Zentrum Berlin, recent developments

    NASA Astrophysics Data System (ADS)

    Brzhezinskaya, Maria; Firsov, Alexander; Erko, Alexei

    2014-09-01

    The 2-Dimensional and 3-Dimensional variable line spacing (VLS) gratings based on total external reflection give the unique possibility for spectroscopy and focusing in application to 4th and 5th generation synchrotron sources. We focus on the elaboration of novel approaches for design and fabrication of 3D VLS working in the entire energy range, from THz to hard X-rays. These optical elements have unique combination of properties and can operate at all XUV sources including Free Electron Lasers (FELs), Energy Recovery Linacs (ERLs) and High Harmonic Generators (HHGs). Such 3D DOEs are able to cover the energy range of up to 20 keV with energy resolution λ/Δλ ≥ 1000 for soft x-ray and λ/Δλ ≥ 10000 for hard x-ray. We fabricate 3D VLS for time-resolved spectroscopy (energy range 100 - 2000 eV, 7500-9500 eV), FELs and ERLs (energy range up to 3 keV), and HHGs (energy range 10 - 200 eV).

  9. Kinetic depth effect and optic flow--I. 3D shape from Fourier motion.

    PubMed

    Dosher, B A; Landy, M S; Sperling, G

    1989-01-01

    Fifty-three different 3D shapes were defined by sequences of 2D views (frames) of dots on a rotating 3D surface. (1) Subjects' accuracy of shape identifications dropped from over 90% to less than 10% when either the polarity of the stimulus dots was alternated from light-on-gray to dark-on-gray on successive frames or when neutral gray interframe intervals were interposed. Both manipulations interfere with motion extraction by spatio-temporal (Fourier) and gradient first-order detectors. Second-order (non-Fourier) detectors that use full-wave rectification are unaffected by alternating-polarity but disrupted by interposed gray frames. (2) To equate the accuracy of two-alternative forced-choice (2AFC) planar direction-of-motion discrimination in standard and polarity-alternated stimuli, standard contrast was reduced. 3D shape discrimination survived contrast reduction in standard stimuli whereas it failed completely with polarity-alternation even at full contrast. (3) When individual dots were permitted to remain in the image sequence for only two frames, performance showed little loss compared to standard displays where individual dots had an expected lifetime of 20 frames, showing that 3D shape identification does not require continuity of stimulus tokens. (4) Performance in all discrimination tasks is predicted (up to a monotone transformation) by considering the quality of first-order information (as given by a simple computation on Fourier power) and the number of locations at which motion information is required. Perceptual first-order analysis of optic flow is the primary substrate for structure-from-motion computations in random dot displays because only it offers sufficient quality of perceptual motion at a sufficient number of locations.

  10. Three-axis distributed fiber optic strain measurement in 3D woven composite structures

    NASA Astrophysics Data System (ADS)

    Castellucci, Matt; Klute, Sandra; Lally, Evan M.; Froggatt, Mark E.; Lowry, David

    2013-03-01

    Recent advancements in composite materials technologies have broken further from traditional designs and require advanced instrumentation and analysis capabilities. Success or failure is highly dependent on design analysis and manufacturing processes. By monitoring smart structures throughout manufacturing and service life, residual and operational stresses can be assessed and structural integrity maintained. Composite smart structures can be manufactured by integrating fiber optic sensors into existing composite materials processes such as ply layup, filament winding and three-dimensional weaving. In this work optical fiber was integrated into 3D woven composite parts at a commercial woven products manufacturing facility. The fiber was then used to monitor the structures during a VARTM manufacturing process, and subsequent static and dynamic testing. Low cost telecommunications-grade optical fiber acts as the sensor using a high resolution commercial Optical Frequency Domain Reflectometer (OFDR) system providing distributed strain measurement at spatial resolutions as low as 2mm. Strain measurements using the optical fiber sensors are correlated to resistive strain gage measurements during static structural loading.

  11. Combining supine MRI and 3D optical scanning for improved surgical planning of breast conserving surgeries

    NASA Astrophysics Data System (ADS)

    Pallone, Matthew J.; Poplack, Steven P.; Barth, Richard J., Jr.; Paulsen, Keith D.

    2012-02-01

    Image-guided wire localization is the current standard of care for the excision of non-palpable carcinomas during breast conserving surgeries (BCS). The efficacy of this technique depends upon the accuracy of wire placement, maintenance of the fixed wire position (despite patient movement), and the surgeon's understanding of the spatial relationship between the wire and tumor. Notably, breast shape can vary significantly between the imaging and surgical positions. Despite this method of localization, re-excision is needed in approximately 30% of patients due to the proximity of cancer to the specimen margins. These limitations make wire localization an inefficient and imprecise procedure. Alternatively, we investigate a method of image registration and finite element (FE) deformation which correlates preoperative supine MRIs with 3D optical scans of the breast surface. MRI of the breast can accurately define the extents of very small cancers. Furthermore, supine breast MR reduces the amount of tissue deformation between the imaging and surgical positions. At the time of surgery, the surface contour of the breast may be imaged using a handheld 3D laser scanner. With the MR images segmented by tissue type, the two scans are approximately registered using fiducial markers present in both acquisitions. The segmented MRI breast volume is then deformed to match the optical surface using a FE mechanical model of breast tissue. The resulting images provide the surgeon with 3D views and measurements of the tumor shape, volume, and position within the breast as it appears during surgery which may improve surgical guidance and obviate the need for wire localization.

  12. Optical-CT 3D Dosimetry Using Fresnel Lenses with Minimal Refractive-Index Matching Fluid

    PubMed Central

    Bache, Steven; Malcolm, Javian; Adamovics, John; Oldham, Mark

    2016-01-01

    Telecentric optical computed tomography (optical-CT) is a state-of-the-art method for visualizing and quantifying 3-dimensional dose distributions in radiochromic dosimeters. In this work a prototype telecentric system (DFOS—Duke Fresnel Optical-CT Scanner) is evaluated which incorporates two substantial design changes: the use of Fresnel lenses (reducing lens costs from $10-30K t0 $1-3K) and the use of a ‘solid tank’ (which reduces noise, and the volume of refractively matched fluid from 1ltr to 10cc). The efficacy of DFOS was evaluated by direct comparison against commissioned scanners in our lab. Measured dose distributions from all systems were compared against the predicted dose distributions from a commissioned treatment planning system (TPS). Three treatment plans were investigated including a simple four-field box treatment, a multiple small field delivery, and a complex IMRT treatment. Dosimeters were imaged within 2h post irradiation, using consistent scanning techniques (360 projections acquired at 1 degree intervals, reconstruction at 2mm). DFOS efficacy was evaluated through inspection of dose line-profiles, and 2D and 3D dose and gamma maps. DFOS/TPS gamma pass rates with 3%/3mm dose difference/distance-to-agreement criteria ranged from 89.3% to 92.2%, compared to from 95.6% to 99.0% obtained with the commissioned system. The 3D gamma pass rate between the commissioned system and DFOS was 98.2%. The typical noise rates in DFOS reconstructions were up to 3%, compared to under 2% for the commissioned system. In conclusion, while the introduction of a solid tank proved advantageous with regards to cost and convenience, further work is required to improve the image quality and dose reconstruction accuracy of the new DFOS optical-CT system. PMID:27019460

  13. Optical-CT 3D Dosimetry Using Fresnel Lenses with Minimal Refractive-Index Matching Fluid.

    PubMed

    Bache, Steven; Malcolm, Javian; Adamovics, John; Oldham, Mark

    2016-01-01

    Telecentric optical computed tomography (optical-CT) is a state-of-the-art method for visualizing and quantifying 3-dimensional dose distributions in radiochromic dosimeters. In this work a prototype telecentric system (DFOS-Duke Fresnel Optical-CT Scanner) is evaluated which incorporates two substantial design changes: the use of Fresnel lenses (reducing lens costs from $10-30K t0 $1-3K) and the use of a 'solid tank' (which reduces noise, and the volume of refractively matched fluid from 1 ltr to 10 cc). The efficacy of DFOS was evaluated by direct comparison against commissioned scanners in our lab. Measured dose distributions from all systems were compared against the predicted dose distributions from a commissioned treatment planning system (TPS). Three treatment plans were investigated including a simple four-field box treatment, a multiple small field delivery, and a complex IMRT treatment. Dosimeters were imaged within 2 h post irradiation, using consistent scanning techniques (360 projections acquired at 1 degree intervals, reconstruction at 2mm). DFOS efficacy was evaluated through inspection of dose line-profiles, and 2D and 3D dose and gamma maps. DFOS/TPS gamma pass rates with 3%/3mm dose difference/distance-to-agreement criteria ranged from 89.3% to 92.2%, compared to from 95.6% to 99.0% obtained with the commissioned system. The 3D gamma pass rate between the commissioned system and DFOS was 98.2%. The typical noise rates in DFOS reconstructions were up to 3%, compared to under 2% for the commissioned system. In conclusion, while the introduction of a solid tank proved advantageous with regards to cost and convenience, further work is required to improve the image quality and dose reconstruction accuracy of the new DFOS optical-CT system.

  14. Optical-CT 3D Dosimetry Using Fresnel Lenses with Minimal Refractive-Index Matching Fluid.

    PubMed

    Bache, Steven; Malcolm, Javian; Adamovics, John; Oldham, Mark

    2016-01-01

    Telecentric optical computed tomography (optical-CT) is a state-of-the-art method for visualizing and quantifying 3-dimensional dose distributions in radiochromic dosimeters. In this work a prototype telecentric system (DFOS-Duke Fresnel Optical-CT Scanner) is evaluated which incorporates two substantial design changes: the use of Fresnel lenses (reducing lens costs from $10-30K t0 $1-3K) and the use of a 'solid tank' (which reduces noise, and the volume of refractively matched fluid from 1 ltr to 10 cc). The efficacy of DFOS was evaluated by direct comparison against commissioned scanners in our lab. Measured dose distributions from all systems were compared against the predicted dose distributions from a commissioned treatment planning system (TPS). Three treatment plans were investigated including a simple four-field box treatment, a multiple small field delivery, and a complex IMRT treatment. Dosimeters were imaged within 2 h post irradiation, using consistent scanning techniques (360 projections acquired at 1 degree intervals, reconstruction at 2mm). DFOS efficacy was evaluated through inspection of dose line-profiles, and 2D and 3D dose and gamma maps. DFOS/TPS gamma pass rates with 3%/3mm dose difference/distance-to-agreement criteria ranged from 89.3% to 92.2%, compared to from 95.6% to 99.0% obtained with the commissioned system. The 3D gamma pass rate between the commissioned system and DFOS was 98.2%. The typical noise rates in DFOS reconstructions were up to 3%, compared to under 2% for the commissioned system. In conclusion, while the introduction of a solid tank proved advantageous with regards to cost and convenience, further work is required to improve the image quality and dose reconstruction accuracy of the new DFOS optical-CT system. PMID:27019460

  15. Reconstruction and Visualization of Coordinated 3D Cell Migration Based on Optical Flow.

    PubMed

    Kappe, Christopher P; Schütz, Lucas; Gunther, Stefan; Hufnagel, Lars; Lemke, Steffen; Leitte, Heike

    2016-01-01

    Animal development is marked by the repeated reorganization of cells and cell populations, which ultimately determine form and shape of the growing organism. One of the central questions in developmental biology is to understand precisely how cells reorganize, as well as how and to what extent this reorganization is coordinated. While modern microscopes can record video data for every cell during animal development in 3D+t, analyzing these videos remains a major challenge: reconstruction of comprehensive cell tracks turned out to be very demanding especially with decreasing data quality and increasing cell densities. In this paper, we present an analysis pipeline for coordinated cellular motions in developing embryos based on the optical flow of a series of 3D images. We use numerical integration to reconstruct cellular long-term motions in the optical flow of the video, we take care of data validation, and we derive a LIC-based, dense flow visualization for the resulting pathlines. This approach allows us to handle low video quality such as noisy data or poorly separated cells, and it allows the biologists to get a comprehensive understanding of their data by capturing dynamic growth processes in stills. We validate our methods using three videos of growing fruit fly embryos.

  16. Coupling 3D Monte Carlo light transport in optically heterogeneous tissues to photoacoustic signal generation

    PubMed Central

    Jacques, Steven L.

    2014-01-01

    The generation of photoacoustic signals for imaging objects embedded within tissues is dependent on how well light can penetrate to and deposit energy within an optically absorbing object, such as a blood vessel. This report couples a 3D Monte Carlo simulation of light transport to stress wave generation to predict the acoustic signals received by a detector at the tissue surface. The Monte Carlo simulation allows modeling of optically heterogeneous tissues, and a simple MATLAB™ acoustic algorithm predicts signals reaching a surface detector. An example simulation considers a skin with a pigmented epidermis, a dermis with a background blood perfusion, and a 500-μm-dia. blood vessel centered at a 1-mm depth in the skin. The simulation yields acoustic signals received by a surface detector, which are generated by a pulsed 532-nm laser exposure before and after inserting the blood vessel. A MATLAB™ version of the acoustic algorithm and a link to the 3D Monte Carlo website are provided. PMID:25426426

  17. Coupling 3D Monte Carlo light transport in optically heterogeneous tissues to photoacoustic signal generation.

    PubMed

    Jacques, Steven L

    2014-12-01

    The generation of photoacoustic signals for imaging objects embedded within tissues is dependent on how well light can penetrate to and deposit energy within an optically absorbing object, such as a blood vessel. This report couples a 3D Monte Carlo simulation of light transport to stress wave generation to predict the acoustic signals received by a detector at the tissue surface. The Monte Carlo simulation allows modeling of optically heterogeneous tissues, and a simple MATLAB™ acoustic algorithm predicts signals reaching a surface detector. An example simulation considers a skin with a pigmented epidermis, a dermis with a background blood perfusion, and a 500-μm-dia. blood vessel centered at a 1-mm depth in the skin. The simulation yields acoustic signals received by a surface detector, which are generated by a pulsed 532-nm laser exposure before and after inserting the blood vessel. A MATLAB™ version of the acoustic algorithm and a link to the 3D Monte Carlo website are provided.

  18. Brightness-compensated 3-D optical flow algorithm for monitoring cochlear motion patterns

    NASA Astrophysics Data System (ADS)

    von Tiedemann, Miriam; Fridberger, Anders; Ulfendahl, Mats; de Monvel, Jacques Boutet

    2010-09-01

    A method for three-dimensional motion analysis designed for live cell imaging by fluorescence confocal microscopy is described. The approach is based on optical flow computation and takes into account brightness variations in the image scene that are not due to motion, such as photobleaching or fluorescence variations that may reflect changes in cellular physiology. The 3-D optical flow algorithm allowed almost perfect motion estimation on noise-free artificial sequences, and performed with a relative error of <10% on noisy images typical of real experiments. The method was applied to a series of 3-D confocal image stacks from an in vitro preparation of the guinea pig cochlea. The complex motions caused by slow pressure changes in the cochlear compartments were quantified. At the surface of the hearing organ, the largest motion component was the transverse one (normal to the surface), but significant radial and longitudinal displacements were also present. The outer hair cell displayed larger radial motion at their basolateral membrane than at their apical surface. These movements reflect mechanical interactions between different cellular structures, which may be important for communicating sound-evoked vibrations to the sensory cells. A better understanding of these interactions is important for testing realistic models of cochlear mechanics.

  19. Fast parallel interferometric 3D tracking of numerous optically trapped particles and their hydrodynamic interaction.

    PubMed

    Ruh, Dominic; Tränkle, Benjamin; Rohrbach, Alexander

    2011-10-24

    Multi-dimensional, correlated particle tracking is a key technology to reveal dynamic processes in living and synthetic soft matter systems. In this paper we present a new method for tracking micron-sized beads in parallel and in all three dimensions - faster and more precise than existing techniques. Using an acousto-optic deflector and two quadrant-photo-diodes, we can track numerous optically trapped beads at up to tens of kHz with a precision of a few nanometers by back-focal plane interferometry. By time-multiplexing the laser focus, we can calibrate individually all traps and all tracking signals in a few seconds and in 3D. We show 3D histograms and calibration constants for nine beads in a quadratic arrangement, although trapping and tracking is easily possible for more beads also in arbitrary 2D arrangements. As an application, we investigate the hydrodynamic coupling and diffusion anomalies of spheres trapped in a 3 × 3 arrangement. PMID:22109012

  20. How effective can optical-CT 3D dosimetry be without refractive fluid matching?

    PubMed Central

    Rankine, L; Oldham

    2013-01-01

    Achieving accurate optical CT 3D dosimetry without the use of viscous refractive index (RI) matching fluids would greatly increase convenience. Software has been developed to simulate optical CT 3D dosimetry for a range of scanning configurations including parallel-beam, point and converging light sources. For each configuration the efficacy of 3 refractive media were investigated: air, water, and a fluid closely matched to Presage (RI = 1.00, 1.33 and 1.49 respectively). The results revealed that the useable radius of the dosimeter (i.e. where data was within 2% of truth) reduced to 68% for water-matching, and 31% for dry-scanning in air. Point source incident ray geometry produced slightly more favourable results, although variation between the three geometries was relatively small. The required detector size however, increased by a factor six for dry-scanning, introducing cost penalties. For applications where dose information is not required in the periphery, some dry and low-viscous matching configurations may be feasible. PMID:24454520

  1. Improved Uav-Borne 3d Mapping by Fusing Optical and Laserscanner Data

    NASA Astrophysics Data System (ADS)

    Jutzi, B.; Weinmann, M.; Meidow, J.

    2013-08-01

    In this paper, a new method for fusing optical and laserscanner data is presented for improved UAV-borne 3D mapping. We propose to equip an unmanned aerial vehicle (UAV) with a small platform which includes two sensors: a standard low-cost digital camera and a lightweight Hokuyo UTM-30LX-EW laserscanning device (210 g without cable). Initially, a calibration is carried out for the utilized devices. This involves a geometric camera calibration and the estimation of the position and orientation offset between the two sensors by lever-arm and bore-sight calibration. Subsequently, a feature tracking is performed through the image sequence by considering extracted interest points as well as the projected 3D laser points. These 2D results are fused with the measured laser distances and fed into a bundle adjustment in order to obtain a Simultaneous Localization and Mapping (SLAM). It is demonstrated that an improvement in terms of precision for the pose estimation is derived by fusing optical and laserscanner data.

  2. Sub-millimeter resolution 3D optical imaging of living tissue using laminar optical tomography

    PubMed Central

    Hillman, Elizabeth M. C.; Burgess, Sean A.

    2009-01-01

    In-vivo imaging of optical contrast in living tissues can allow measurement of functional parameters such as blood oxygenation and detection of targeted and active fluorescent contrast agents. However, optical imaging must overcome the effects of light scattering, which limit the penetration depth and can affect quantitation and sensitivity. This article focuses on a technique for high-resolution, high-speed depth-resolved optical imaging of superficial living tissues called laminar optical tomography (LOT), which is capable of imaging absorbing and fluorescent contrast in living tissues to depths of 2–3 mm with 100–200 micron resolution. An overview of the advantages and challenges of in-vivo optical imaging is followed by a review of currently available techniques for high-resolution optical imaging of tissues. LOT is then described, including a description of the imaging system design and discussion of data analysis and image reconstruction approaches. Examples of recent applications of LOT are then provided and compared to other existing technologies. By measuring multiply-scattered light, Laminar Optical Tomography can probe beneath the surface of living tissues such as the skin and brain. PMID:19844595

  3. Development of portable 3D optical measuring system using structured light projection method

    NASA Astrophysics Data System (ADS)

    Aoki, Hiroshi

    2014-05-01

    Three-dimensional (3D) scanners are becoming increasingly common in many industries. However most of these scanning technologies have drawbacks for practical use due to size, weight, accessibility, and ease-of-use. Depending on the application, speed, flexibility and portability can often be deemed more important than accuracy. We have developed a solution to address this market requirement and overcome the aforementioned limitations. To counteract shortcomings such as heavy weight and large size, an optical sensor is used that consists of a laser projector, a camera system, and a multi-touch screen. Structured laser light is projected onto the measured object with a newly designed laser projector employing a single Micro Electro Mechanical Systems (MEMS) mirror. The optical system is optimized for the combination of a Laser Diode (LD), the MEMS mirror and the size of measurement area to secure the ideal contrast of structured light. Also, we developed a new calibration algorithm for this sensor with MEMS laser projector that uses an optical camera model for point cloud calculation. These technical advancements make the sensor compact, save power consumption, and reduce heat generation yet still allows for rapid calculation. Due to the principle of the measurement, structured light triangulation utilizing phase-shifting technology, resolution is improved. To meet requirements for practical applications, the optics, electronics, image processing, display and data management capabilities have been integrated into a single compact unit.

  4. Fiber based optical tweezers for simultaneous in situ force exertion and measurements in a 3D polyacrylamide gel compartment.

    PubMed

    Ti, Chaoyang; Thomas, Gawain M; Ren, Yundong; Zhang, Rui; Wen, Qi; Liu, Yuxiang

    2015-07-01

    Optical tweezers play an important role in biological applications. However, it is difficult for traditional optical tweezers based on objective lenses to work in a three-dimensional (3D) solid far away from the substrate. In this work, we develop a fiber based optical trapping system, namely inclined dual fiber optical tweezers, that can simultaneously apply and measure forces both in water and in a 3D polyacrylamide gel matrix. In addition, we demonstrate in situ, non-invasive characterization of local mechanical properties of polyacrylamide gel by measurements on an embedded bead. The fiber optical tweezers measurements agree well with those of atomic force microscopy (AFM). The inclined dual fiber optical tweezers provide a promising and versatile tool for cell mechanics study in 3D environments.

  5. Fiber based optical tweezers for simultaneous in situ force exertion and measurements in a 3D polyacrylamide gel compartment

    PubMed Central

    Ti, Chaoyang; Thomas, Gawain M; Ren, Yundong; Zhang, Rui; Wen, Qi; Liu, Yuxiang

    2015-01-01

    Optical tweezers play an important role in biological applications. However, it is difficult for traditional optical tweezers based on objective lenses to work in a three-dimensional (3D) solid far away from the substrate. In this work, we develop a fiber based optical trapping system, namely inclined dual fiber optical tweezers, that can simultaneously apply and measure forces both in water and in a 3D polyacrylamide gel matrix. In addition, we demonstrate in situ, non-invasive characterization of local mechanical properties of polyacrylamide gel by measurements on an embedded bead. The fiber optical tweezers measurements agree well with those of atomic force microscopy (AFM). The inclined dual fiber optical tweezers provide a promising and versatile tool for cell mechanics study in 3D environments. PMID:26203364

  6. Scanning all-fiber-optic endomicroscopy system for 3D nonlinear optical imaging of biological tissues

    PubMed Central

    Wu, Yicong; Leng, Yuxin; Xi, Jiefeng; Li, Xingde

    2009-01-01

    An extremely compact all-fiber-optic scanning endomicroscopy system was developed for two-photon fluorescence (TPF) and second harmonic generation (SHG) imaging of biological samples. A conventional double-clad fiber (DCF) was employed in the endomicroscope for single-mode femtosecond pulse delivery, multimode nonlinear optical signals collection and fast two-dimensional scanning. A single photonic bandgap fiber (PBF) with negative group velocity dispersion at two-photon excitation wavelength (i.e. ~810 nm) was used for pulse prechirping in replacement of a bulky grating/lens-based pulse stretcher. The combined use of DCF and PBF in the endomicroscopy system made the endomicroscope basically a plug-and-play unit. The excellent imaging ability of the extremely compact all-fiber-optic nonlinear optical endomicroscopy system was demonstrated by SHG imaging of rat tail tendon and depth-resolved TPF imaging of epithelial tissues stained with acridine orange. The preliminary results suggested the promising potential of this extremely compact all-fiber-optic endomicroscopy system for real-time assessment of both epithelial and stromal structures in luminal organs. PMID:19434122

  7. Axial-Stereo 3-D Optical Metrology for Inner Profile of Pipes Using a Scanning Laser Endoscope

    PubMed Central

    Gong, Yuanzheng; Johnston, Richard S.; Melville, C. David; Seibel, Eric J.

    2015-01-01

    As the rapid progress in the development of optoelectronic components and computational power, 3D optical metrology becomes more and more popular in manufacturing and quality control due to its flexibility and high speed. However, most of the optical metrology methods are limited to external surfaces. This paper proposed a new approach to measure tiny internal 3D surfaces with a scanning fiber endoscope and axial-stereo vision algorithm. A dense, accurate point cloud of internally machined threads was generated to compare with its corresponding X-ray 3D data as ground truth, and the quantification was analyzed by Iterative Closest Points algorithm. PMID:26640425

  8. Axial-Stereo 3-D Optical Metrology for Inner Profile of Pipes Using a Scanning Laser Endoscope

    NASA Astrophysics Data System (ADS)

    Gong, Yuanzheng; Johnston, Richard S.; Melville, C. David; Seibel, Eric J.

    2015-07-01

    As the rapid progress in the development of optoelectronic components and computational power, 3-D optical metrology becomes more and more popular in manufacturing and quality control due to its flexibility and high speed. However, most of the optical metrology methods are limited to external surfaces. This article proposed a new approach to measure tiny internal 3-D surfaces with a scanning fiber endoscope and axial-stereo vision algorithm. A dense, accurate point cloud of internally machined threads was generated to compare with its corresponding X-ray 3-D data as ground truth, and the quantification was analyzed by Iterative Closest Points algorithm.

  9. Strongly Interacting Fermions in Optical Lattices

    NASA Astrophysics Data System (ADS)

    Koetsier, A. O.

    2009-07-01

    presented here concerns fermionic atoms in periodic potential formed by interfering laser beams. Indeed, the standing light wave created by the interfering beams gives rise to a lattice potential because of the Stark effect which couples the electronic energy levels of the atoms to the spatially undulating electric field. Furthermore, fermionic atoms can be prepared in two different hyperfine states corresponding to the the spin-up and spin-down quantum states, and as such mimic electrons moving in the lattice structure of solids. This system is well described by the famous Hubbard model which we introduce in chapter 2 and, under certain conditions, undergoes a phase transition into the Néel state which believed to be a precursor to superconductivity in certain high-temperature superconductors. In chapter 3, we calculate precisely how the Néel state may be achieved in an ultracold fermionic atom gas. When the number of spin-up and spin-down atoms is unequal the system becomes spin-canted and exhibits both ferro- and antiferromagnetic characteristics, as we show in chapter 4. We also find there are topological excitations present in the quantum spin texture known as merons which have never unambiguously been observed before. In order to form a Bose-Einstein condensate, fermionic atoms must first form pairs, and can do so in two contrasting ways. The relationship between these two qualitatively di erent forms of pairing is described in chapter 5, and we examine how these two types of pairs transform into one another in an optical lattice in chapter 6. Finally, chapter 7 is a detailed eld-theoretic study of pairing as it occurs in an ultracold Bose gas. There, we find there is an intriguing bosonic analogy of the two forms of fermion pairing and explore the properties of these pairs.

  10. Detection of antiferromagnetic order by cooling atoms in an optical lattice

    NASA Astrophysics Data System (ADS)

    Yang, Tsung-Lin; Teles, Rafael; Hazzard, Kaden; Hulet, Randall; Rice University Collaboration

    2016-05-01

    We have realized the Fermi-Hubbard model with fermionic 6 Li atoms in a three-dimensional compensated optical lattice. The compensated optical lattice has provided low enough temperatures to produce short-range antiferromagnetic (AF) spin correlations, which we detect via Bragg scattering of light. Previously, we reached temperatures down to 1.4 times that of the AFM phase transition, more than a factor of 2 below temperatures obtained previously in 3D optical lattices with fermions. In order to further reduce the entropy in the compensated lattice, we implement an entropy conduit - which is a single blue detuned laser beam with a waist size smaller than the overall atomic sample size. This repulsive narrow potential provides a conductive metallic path between the low entropy core and the edges of the atomic sample where atoms may be evaporated. In addition, the entropy conduit may store entropy, thus further lowering the entropy in the core. We will report on the status of these efforts to further cool atoms in the optical lattice. Work supported by ARO MURI Grant, NSF and The Welch Foundation.

  11. 3D optical coherence tomography image registration for guiding cochlear implant insertion

    NASA Astrophysics Data System (ADS)

    Cheon, Gyeong-Woo; Jeong, Hyun-Woo; Chalasani, Preetham; Chien, Wade W.; Iordachita, Iulian; Taylor, Russell; Niparko, John; Kang, Jin U.

    2014-03-01

    In cochlear implant surgery, an electrode array is inserted into the cochlear canal to restore hearing to a person who is profoundly deaf or significantly hearing impaired. One critical part of the procedure is the insertion of the electrode array, which looks like a thin wire, into the cochlear canal. Although X-ray or computed tomography (CT) could be used as a reference to evaluate the pathway of the whole electrode array, there is no way to depict the intra-cochlear canal and basal turn intra-operatively to help guide insertion of the electrode array. Optical coherent tomography (OCT) is a highly effective way of visualizing internal structures of cochlea. Swept source OCT (SSOCT) having center wavelength of 1.3 micron and 2D Galvonometer mirrors was used to achieve 7-mm depth 3-D imaging. Graphics processing unit (GPU), OpenGL, C++ and C# were integrated for real-time volumetric rendering simultaneously. The 3D volume images taken by the OCT system were assembled and registered which could be used to guide a cochlear implant. We performed a feasibility study using both dry and wet temporal bones and the result is presented.

  12. Accuracy assessment of human trunk surface 3D reconstructions from an optical digitising system.

    PubMed

    Pazos, V; Cheriet, F; Song, L; Labelle, H; Dansereau, J

    2005-01-01

    The lack of reliable techniques to follow up scoliotic deformity from the external asymmetry of the trunk leads to a general use of X-rays and indices of spinal deformity. Young adolescents with idiopathic scoliosis need intensive follow-ups for many years and, consequently, they are repeatedly exposed to ionising radiation, which is hazardous to their long-term health. Furthermore, treatments attempt to improve both spinal and surface deformities, but internal indices do not describe the external asymmetry. The purpose of this study was to assess a commercial, optical 3D digitising system for the 3D reconstruction of the entire trunk for clinical assessment of external asymmetry. The resulting surface is a textured, high-density polygonal mesh. The accuracy assessment was based on repeated reconstructions of a manikin with markers fixed on it. The average normal distance between the reconstructed surfaces and the reference data (markers measured with CMM) was 1.1 +/- 0.9 mm. PMID:15742714

  13. Topological Varma Superfluid in Optical Lattices

    NASA Astrophysics Data System (ADS)

    Di Liberto, M.; Hemmerich, A.; Morais Smith, C.

    2016-10-01

    Topological states of matter are peculiar quantum phases showing different edge and bulk transport properties connected by the bulk-boundary correspondence. While noninteracting fermionic topological insulators are well established by now and have been classified according to a tenfold scheme, the possible realization of topological states for bosons has not been explored much yet. Furthermore, the role of interactions is far from being understood. Here, we show that a topological state of matter exclusively driven by interactions may occur in the p band of a Lieb optical lattice filled with ultracold bosons. The single-particle spectrum of the system displays a remarkable parabolic band-touching point, with both bands exhibiting non-negative curvature. Although the system is neither topological at the single-particle level nor for the interacting ground state, on-site interactions induce an anomalous Hall effect for the excitations, carrying a nonzero Chern number. Our work introduces an experimentally realistic strategy for the formation of interaction-driven topological states of bosons.

  14. Particle-based optical pressure sensors for 3D pressure mapping.

    PubMed

    Banerjee, Niladri; Xie, Yan; Chalaseni, Sandeep; Mastrangelo, Carlos H

    2015-10-01

    This paper presents particle-based optical pressure sensors for in-flow pressure sensing, especially for microfluidic environments. Three generations of pressure sensitive particles have been developed- flat planar particles, particles with integrated retroreflectors and spherical microballoon particles. The first two versions suffer from pressure measurement dependence on particles orientation in 3D space and angle of interrogation. The third generation of microspherical particles with spherical symmetry solves these problems making particle-based manometry in microfluidic environment a viable and efficient methodology. Static and dynamic pressure measurements have been performed in liquid medium for long periods of time in a pressure range of atmospheric to 40 psi. Spherical particles with radius of 12 μm and balloon-wall thickness of 0.5 μm are effective for more than 5 h in this pressure range with an error of less than 5%.

  15. Full optical characterization of autostereoscopic 3D displays using local viewing angle and imaging measurements

    NASA Astrophysics Data System (ADS)

    Boher, Pierre; Leroux, Thierry; Bignon, Thibault; Collomb-Patton, Véronique

    2012-03-01

    Two commercial auto-stereoscopic 3D displays are characterized a using Fourier optics viewing angle system and an imaging video-luminance-meter. One display has a fixed emissive configuration and the other adapts its emission to the observer position using head tracking. For a fixed emissive condition, three viewing angle measurements are performed at three positions (center, right and left). Qualified monocular and binocular viewing spaces in front of the display are deduced as well as the best working distance. The imaging system is then positioned at this working distance and crosstalk homogeneity on the entire surface of the display is measured. We show that the crosstalk is generally not optimized on all the surface of the display. Display aspect simulation using viewing angle measurements allows understanding better the origin of those crosstalk variations. Local imperfections like scratches and marks generally increase drastically the crosstalk, demonstrating that cleanliness requirements for this type of display are quite critical.

  16. 3D optical phase reconstruction within PMMA samples using a spectral OCT system

    NASA Astrophysics Data System (ADS)

    Briones-R., Manuel d. J.; De La Torre-Ibarra, Manuel H.; Mendoza Santoyo, Fernando

    2015-08-01

    The optical coherence tomography (OCT) technique has proved to be a useful method in biomedical areas such as ophthalmology, dentistry, dermatology, among many others. In all these applications the main target is to reconstruct the internal structure of the samples from which the physician's expertise may recognize and diagnose the existence of a disease. Nowadays OCT has been applied one step further and is used to study the mechanics of some particular type of materials, where the resulting information involves more than just their internal structure and the measurement of parameters such as displacements, stress and strain. Here we report on a spectral OCT system used to image the internal 3D microstructure and displacement maps from a PMMA (Poly-methyl-methacrylate) sample, subjected to a deformation by a controlled three point bending and tilting. The internal mechanical response of the polymer is shown as consecutive 2D images.

  17. Intra-retinal layer segmentation of 3D optical coherence tomography using coarse grained diffusion map

    PubMed Central

    Kafieh, Raheleh; Rabbani, Hossein; Abramoff, Michael D.; Sonka, Milan

    2013-01-01

    Optical coherence tomography (OCT) is a powerful and noninvasive method for retinal imaging. In this paper, we introduce a fast segmentation method based on a new variant of spectral graph theory named diffusion maps. The research is performed on spectral domain (SD) OCT images depicting macular and optic nerve head appearance. The presented approach does not require edge-based image information in localizing most of boundaries and relies on regional image texture. Consequently, the proposed method demonstrates robustness in situations of low image contrast or poor layer-to-layer image gradients. Diffusion mapping applied to 2D and 3D OCT datasets is composed of two steps, one for partitioning the data into important and less important sections, and another one for localization of internal layers. In the first step, the pixels/voxels are grouped in rectangular/cubic sets to form a graph node. The weights of the graph are calculated based on geometric distances between pixels/voxels and differences of their mean intensity. The first diffusion map clusters the data into three parts, the second of which is the area of interest. The other two sections are eliminated from the remaining calculations. In the second step, the remaining area is subjected to another diffusion map assessment and the internal layers are localized based on their textural similarities. The proposed method was tested on 23 datasets from two patient groups (glaucoma and normals). The mean unsigned border positioning errors (mean ± SD) was 8.52 ± 3.13 and 7.56 ± 2.95 μm for the 2D and 3D methods, respectively. PMID:23837966

  18. Rat Optic Nerve Head Anatomy within 3D Histomorphometric Reconstructions of Normal Control Eyes

    PubMed Central

    Pazos, Marta; Yang, Hongli; Gardiner, Stuart K.; Cepurna, William O.; Johnson, Elaine C.; Morrison, John C.; Burgoyne, Claude F.

    2015-01-01

    The purpose of this study is to three-dimensionally (3D) characterize the principal macroscopic and microscopic relationships within the rat optic nerve head (ONH) and quantify them in normal control eyes. Perfusion-fixed, trephinated ONH from 8 normal control eyes of 8 Brown Norway Rats were 3D histomorphometrically reconstructed, visualized, delineated and parameterized. The rat ONH consists of 2 scleral openings, (a superior neurovascular and inferior arterial) separated by a thin connective tissue strip we have termed the “scleral sling”. Within the superior opening, the nerve abuts a prominent extension of Bruch's Membrane (BM) superiorly and is surrounded by a vascular plexus, as it passes through the sclera, that is a continuous from the choroid into and through the dural sheath and contains the central retinal vein (CRV), (inferiorly). The inferior scleral opening contains the central retinal artery and three long posterior ciliary arteries which obliquely pass through the sclera to obtain the choroid. Bruch's Membrane Opening (BMO) is irregular and vertically elongated, enclosing the nerve (superiorly) and CRV and CRA (inferiorly). Overall mean BMO Depth, BMO Area, Choroidal Thickness and peripapillary Scleral Thickness were 29 μm, 56.5 × 103 μm2, 57 μm and 104 μm respectively. Mean anterior scleral canal opening (ASCO) and posterior scleral canal opening (PSCO) radii were 201 ± 15 μm and 204 ± 16 μm, respectively. Mean optic nerve area at the ASCO and PSCO were 46.3 × 103 ± 4.4 × 103 μm2 and 44.1 × 103 ± 4.5 × 103 μm2 respectively. In conclusion, the 3D complexity of the rat ONH and the extent to which it differs from the primate have been under-appreciated within previous 2D studies. Properly understood, these anatomic differences may provide new insights into the relative susceptibilities of the rat and primate ONH to elevated intraocular pressure. PMID:26021973

  19. Oscillating optical tweezer-based 3-D confocal microrheometer for investigating the intracellular micromechanics and structures

    NASA Astrophysics Data System (ADS)

    Ou-Yang, H. D.; Rickter, E. A.; Pu, C.; Latinovic, O.; Kumar, A.; Mengistu, M.; Lowe-Krentz, L.; Chien, S.

    2005-08-01

    Mechanical properties of living biological cells are important for cells to maintain their shapes, support mechanical stresses and move through tissue matrix. The use of optical tweezers to measure micromechanical properties of cells has recently made significant progresses. This paper presents a new approach, the oscillating optical tweezer cytorheometer (OOTC), which takes advantage of the coherent detection of harmonically modulated particle motions by a lock-in amplifier to increase sensitivity, temporal resolution and simplicity. We demonstrate that OOTC can measure the dynamic mechanical modulus in the frequency range of 0.1-6,000 Hz at a rate as fast as 1 data point per second with submicron spatial resolution. More importantly, OOTC is capable of distinguishing the intrinsic non-random temporal variations from random fluctuations due to Brownian motion; this capability, not achievable by conventional approaches, is particular useful because living systems are highly dynamic and often exhibit non-thermal, rhythmic behavior in a broad time scale from a fraction of a second to hours or days. Although OOTC is effective in measuring the intracellular micromechanical properties, unless we can visualize the cytoskeleton in situ, the mechanical property data would only be as informative as that of "Blind men and the Elephant". To solve this problem, we take two steps, the first, to use of fluorescent imaging to identify the granular structures trapped by optical tweezers, and second, to integrate OOTC with 3-D confocal microscopy so we can take simultaneous, in situ measurements of the micromechanics and intracellular structure in living cells. In this paper, we discuss examples of applying the oscillating tweezer-based cytorheometer for investigating cultured bovine endothelial cells, the identification of caveolae as some of the granular structures in the cell as well as our approach to integrate optical tweezers with a spinning disk confocal microscope.

  20. Automatic registration of optical imagery with 3d lidar data using local combined mutual information

    NASA Astrophysics Data System (ADS)

    Parmehr, E. G.; Fraser, C. S.; Zhang, C.; Leach, J.

    2013-10-01

    Automatic registration of multi-sensor data is a basic step in data fusion for photogrammetric and remote sensing applications. The effectiveness of intensity-based methods such as Mutual Information (MI) for automated registration of multi-sensor image has been previously reported for medical and remote sensing applications. In this paper, a new multivariable MI approach that exploits complementary information of inherently registered LiDAR DSM and intensity data to improve the robustness of registering optical imagery and LiDAR point cloud, is presented. LiDAR DSM and intensity information has been utilised in measuring the similarity of LiDAR and optical imagery via the Combined MI. An effective histogramming technique is adopted to facilitate estimation of a 3D probability density function (pdf). In addition, a local similarity measure is introduced to decrease the complexity of optimisation at higher dimensions and computation cost. Therefore, the reliability of registration is improved due to the use of redundant observations of similarity. The performance of the proposed method for registration of satellite and aerial images with LiDAR data in urban and rural areas is experimentally evaluated and the results obtained are discussed.

  1. Label-free optical detection of cells grown in 3D silicon microstructures.

    PubMed

    Merlo, Sabina; Carpignano, Francesca; Silva, Gloria; Aredia, Francesca; Scovassi, A Ivana; Mazzini, Giuliano; Surdo, Salvatore; Barillaro, Giuseppe

    2013-08-21

    We demonstrate high aspect-ratio photonic crystals that could serve as three-dimensional (3D) microincubators for cell culture and also provide label-free optical detection of the cells. The investigated microstructures, fabricated by electrochemical micromachining of standard silicon wafers, consist of periodic arrays of silicon walls separated by narrow deeply etched air-gaps (50 μm high and 5 μm wide) and feature the typical spectral properties of photonic crystals in the wavelength range 1.0-1.7 μm: their spectral reflectivity is characterized by wavelength regions where reflectivity is high (photonic bandgaps), separated by narrow wavelength regions where reflectivity is very low. In this work, we show that the presence of cells, grown inside the gaps, strongly affects light propagation across the photonic crystal and, therefore, its spectral reflectivity. Exploiting a label-free optical detection method, based on a fiberoptic setup, we are able to probe the extension of cells adherent to the vertical silicon walls with a non-invasive direct testing. In particular, the intensity ratio at two wavelengths is the experimental parameter that can be well correlated to the cell spreading on the silicon wall inside the gaps.

  2. In situ 3D characterization of historical coatings and wood using multimodal nonlinear optical microscopy.

    PubMed

    Latour, Gaël; Echard, Jean-Philippe; Didier, Marie; Schanne-Klein, Marie-Claire

    2012-10-22

    We demonstrate multimodal nonlinear optical imaging of historical artifacts by combining Second Harmonic Generation (SHG) and Two-Photon Excited Fluorescence (2PEF) microscopies. We first identify the nonlinear optical response of materials commonly encountered in coatings of cultural heritage artifacts by analyzing one- and multi-layered model samples. We observe 2PEF signals from cochineal lake and sandarac and show that pigments and varnish films can be discriminated by exploiting their different emission spectral ranges as in luminescence linear spectroscopy. We then demonstrate SHG imaging of a filler, plaster, composed of bassanite particles which exhibit a non centrosymmetric crystal structure. We also show that SHG/2PEF imaging enables the visualization of wood microstructure through typically 60 µm-thick coatings by revealing crystalline cellulose (SHG signal) and lignin (2PEF signal) in the wood cell walls. Finally, in situ multimodal nonlinear imaging is demonstrated in a historical violin. SHG/2PEF imaging thus appears as a promising non-destructive and contactless tool for in situ 3D investigation of historical coatings and more generally for wood characterization and coating analysis at micrometer scale. PMID:23187225

  3. Real-time 3D Fourier-domain optical coherence tomography guided microvascular anastomosis

    NASA Astrophysics Data System (ADS)

    Huang, Yong; Ibrahim, Zuhaib; Lee, W. P. A.; Brandacher, Gerald; Kang, Jin U.

    2013-03-01

    Vascular and microvascular anastomosis is considered to be the foundation of plastic and reconstructive surgery, hand surgery, transplant surgery, vascular surgery and cardiac surgery. In the last two decades innovative techniques, such as vascular coupling devices, thermo-reversible poloxamers and suture-less cuff have been introduced. Intra-operative surgical guidance using a surgical imaging modality that provides in-depth view and 3D imaging can improve outcome following both conventional and innovative anastomosis techniques. Optical coherence tomography (OCT) is a noninvasive high-resolution (micron level), high-speed, 3D imaging modality that has been adopted widely in biomedical and clinical applications. In this work we performed a proof-of-concept evaluation study of OCT as an assisted intraoperative and post-operative imaging modality for microvascular anastomosis of rodent femoral vessels. The OCT imaging modality provided lateral resolution of 12 μm and 3.0 μm axial resolution in air and 0.27 volume/s imaging speed, which could provide the surgeon with clearly visualized vessel lumen wall and suture needle position relative to the vessel during intraoperative imaging. Graphics processing unit (GPU) accelerated phase-resolved Doppler OCT (PRDOCT) imaging of the surgical site was performed as a post-operative evaluation of the anastomosed vessels and to visualize the blood flow and thrombus formation. This information could help surgeons improve surgical precision in this highly challenging anastomosis of rodent vessels with diameter less than 0.5 mm. Our imaging modality could not only detect accidental suture through the back wall of lumen but also promptly diagnose and predict thrombosis immediately after reperfusion. Hence, real-time OCT can assist in decision-making process intra-operatively and avoid post-operative complications.

  4. Nonlinear Optical Macroscopic Assessment of 3-D Corneal Collagen Organization and Axial Biomechanics

    PubMed Central

    Winkler, Moritz; Chai, Dongyul; Kriling, Shelsea; Nien, Chyong Jy; Brown, Donald J.; Jester, Bryan; Juhasz, Tibor

    2011-01-01

    Purpose. To characterize and quantify the collagen fiber (lamellar) organization of human corneas in three dimensions by using nonlinear optical high-resolution macroscopy (NLO-HRMac) and to correlate these findings with mechanical data obtained by indentation testing of corneal flaps. Methods. Twelve corneas from 10 donors were studied. Vibratome sections, 200 μm thick, from five donor eyes were cut along the vertical meridian from limbus to limbus (arc length, 12 mm). Backscattered second harmonic–generated (SHG) NLO signals from these sections were collected as a series of overlapping 3-D images, which were concatenated to form a single 3-D mosaic (pixel resolution: 0.44 μm lateral, 2 μm axial). Collagen fiber intertwining was quantified by determining branching point density as a function of stromal depth. Mechanical testing was performed on corneal flaps from seven additional eyes. Corneas were cut into three layers (anterior, middle, and posterior) using a femtosecond surgical laser system and underwent indentation testing to determine the elastic modulus for each layer. Results. The 3-D reconstructions revealed complex collagen fiber branching patterns in the anterior cornea, with fibers extending from the anterior limiting lamina (ALL, Bowman's layer), intertwining with deeper fibers and reinserting back to the ALL, forming bow spring–like structures. Measured branching-point density was four times higher in the anterior third of the cornea than in the posterior third and decreased logarithmically with increasing distance from the ALL. Indentation testing showed an eightfold increase in elastic modulus in the anterior stroma. Conclusions. The axial gradient in lamellar intertwining appears to be associated with an axial gradient in the effective elastic modulus of the cornea, suggesting that collagen fiber intertwining and formation of bow spring–like structures provide structural support similar to cross-beams in bridges and large-scale structures

  5. Formation and Dynamics of Antiferromagnetic Correlations in Tunable Optical Lattices

    NASA Astrophysics Data System (ADS)

    Greif, Daniel; Jotzu, Gregor; Messer, Michael; Desbuquois, Rémi; Esslinger, Tilman

    2015-12-01

    We report on the observation of antiferromagnetic correlations of ultracold fermions in a variety of optical lattice geometries that are well described by the Hubbard model, including dimers, 1D chains, ladders, isolated and coupled honeycomb planes, as well as square and cubic lattices. The dependence of the strength of spin correlations on the specific geometry is experimentally studied by measuring the correlations along different lattice tunneling links, where a redistribution of correlations between the different lattice links is observed. By measuring the correlations in a crossover between distinct geometries, we demonstrate an effective reduction of the dimensionality for our atom numbers and temperatures. We also investigate the formation and redistribution time of spin correlations by dynamically changing the lattice geometry and studying the time evolution of the system. Time scales ranging from a sudden quench of the lattice geometry to an adiabatic evolution are probed.

  6. A prototype fan-beam optical CT scanner for 3D dosimetry

    SciTech Connect

    Campbell, Warren G.; Rudko, D. A.; Braam, Nicolas A.; Jirasek, Andrew; Wells, Derek M.

    2013-06-15

    Purpose: The objective of this work is to introduce a prototype fan-beam optical computed tomography scanner for three-dimensional (3D) radiation dosimetry. Methods: Two techniques of fan-beam creation were evaluated: a helium-neon laser (HeNe, {lambda} = 543 nm) with line-generating lens, and a laser diode module (LDM, {lambda} = 635 nm) with line-creating head module. Two physical collimator designs were assessed: a single-slot collimator and a multihole collimator. Optimal collimator depth was determined by observing the signal of a single photodiode with varying collimator depths. A method of extending the dynamic range of the system is presented. Two sample types were used for evaluations: nondosimetric absorbent solutions and irradiated polymer gel dosimeters, each housed in 1 liter cylindrical plastic flasks. Imaging protocol investigations were performed to address ring artefacts and image noise. Two image artefact removal techniques were performed in sinogram space. Collimator efficacy was evaluated by imaging highly opaque samples of scatter-based and absorption-based solutions. A noise-based flask registration technique was developed. Two protocols for gel manufacture were examined. Results: The LDM proved advantageous over the HeNe laser due to its reduced noise. Also, the LDM uses a wavelength more suitable for the PRESAGE{sup TM} dosimeter. Collimator depth of 1.5 cm was found to be an optimal balance between scatter rejection, signal strength, and manufacture ease. The multihole collimator is capable of maintaining accurate scatter-rejection to high levels of opacity with scatter-based solutions (T < 0.015%). Imaging protocol investigations support the need for preirradiation and postirradiation scanning to reduce reflection-based ring artefacts and to accommodate flask imperfections and gel inhomogeneities. Artefact removal techniques in sinogram space eliminate streaking artefacts and reduce ring artefacts of up to {approx}40% in magnitude. The

  7. Evolution of the Hofstadter butterfly in a tunable optical lattice

    NASA Astrophysics Data System (ADS)

    Yılmaz, F.; Ünal, F. Nur; Oktel, M. Ã.-.

    2015-06-01

    Recent advances in realizing artificial gauge fields on optical lattices promise experimental detection of topologically nontrivial energy spectra. Self-similar fractal energy structures generally known as Hofstadter butterflies depend sensitively on the geometry of the underlying lattice, as well as the applied magnetic field. The recent demonstration of an adjustable lattice geometry [L. Tarruell, D. Greif, T. Uehlinger, G. Jotzu, and T. Esslinger, Nature (London) 483, 302 (2012), 10.1038/nature10871] presents a unique opportunity to study this dependence. In this paper, we calculate the Hofstadter butterflies that can be obtained in such an adjustable lattice and find three qualitatively different regimes. We show that the existence of Dirac points at zero magnetic field does not imply the topological equivalence of spectra at finite field. As the real-space structure evolves from the checkerboard lattice to the honeycomb lattice, two square-lattice Hofstadter butterflies merge to form a honeycomb lattice butterfly. This merging is topologically nontrivial, as it is accomplished by sequential closings of gaps. Ensuing Chern number transfer between the bands can be probed with the adjustable lattice experiments. We also calculate the Chern numbers of the gaps for qualitatively different spectra and discuss the evolution of topological properties with underlying lattice geometry.

  8. Quantum Hall physics with cold atoms in cylindrical optical lattices

    NASA Astrophysics Data System (ADS)

    Łåcki, Mateusz; Pichler, Hannes; Sterdyniak, Antoine; Lyras, Andreas; Lembessis, Vassilis E.; Al-Dossary, Omar; Budich, Jan Carl; Zoller, Peter

    2016-01-01

    We propose and study various realizations of a Hofstadter-Hubbard model on a cylinder geometry with fermionic cold atoms in optical lattices. The cylindrical optical lattice is created by copropagating Laguerre-Gauss beams, i.e., light beams carrying orbital angular momentum. By strong focusing of the light beams we create a real-space optical lattice in the form of rings, which are offset in energy. A second set of Laguerre-Gauss beams then induces a Raman-hopping between these rings, imprinting phases corresponding to a synthetic magnetic field (artificial gauge field). In addition, by rotating the lattice potential, we achieve a slowly varying flux through the hole of the cylinder, which allows us to probe the Hall response of the system as a realization of Laughlin's thought experiment. We study how in the presence of interactions fractional quantum Hall physics could be observed in this setup.

  9. 2D and 3D micro-XRF based on polycapillary optics at XLab Frascati

    NASA Astrophysics Data System (ADS)

    Polese, C.; Cappuccio, G.; Dabagov, S. B.; Hampai, D.; Liedl, A.; Pace, E.

    2015-08-01

    XRF imaging spectrometry is a powerful tool for materials characterization. A high spatial resolution is often required, in order to appreciate very tiny details of the studied object. With respect to simple pinholes, polycapillary optics allows much more intense fluxes to be achieved. This is fundamental to detect elements in trace and to strongly reduce the global acquisition time that is actually among the main reasons, in addition to radioprotection issues, affecting the competitiveness of XRF imaging with respect to other faster imaging techniques such as multispectral imaging. Unlike other well-known X-ray optics, principally employed for high brilliant radiation source such as synchrotron facilities, polyCO can be efficiently coupled also with conventional X-ray tubes. All these aspects make them the most suitable choice to realize portable, safe and high performing μXRF spectrometers. In this work preliminary results achieved with a novel 2D and 3D XRF facility, called Rainbow X-Ray (RXR), are reported, with particular attention to the spatial resolution achieved. RXR is based on the confocal arrangement of three polycapillary lenses, one focusing the primary beam and the other two capturing the fluorescence signal. The detection system is split in two couples of lens-detector in order to cover a wider energy range. The entire device is a laboratory user-friendly facility and, though it allows measurements on medium-size objects, its dimensions do not preclude it to be transported for in situ analysis on request, thanks also to a properly shielded cabinet.

  10. Best fit refractive index of matching liquid for 3D NIPAM gel dosimeters using optical CT

    NASA Astrophysics Data System (ADS)

    Chen, Chin-Hsing; Wu, Jay; Hsieh, Bor-Tsung; Chen, De-Shiou; Wang, Tzu-Hwei; Chien, Sou-Hsin; Chang, Yuan-Jen

    2014-11-01

    The accuracy of an optical computed tomography (CT)-based dosimeter is significantly affected by the refractive index (RI) of the matching liquid. Mismatched RI induces reflection and refraction as the laser beam passes through the gel phantom. Moreover, the unwanted light rays collected by the photodetector produce image artifacts after image reconstruction from the collected data. To obtain the best image quality, this study investigates the best-fit RI of the matching liquid for a 3D NIPAM gel dosimeter. The three recipes of NIPAM polymer gel used in this study consisted of 5% gelatin, 5% NIPAM and 3% N,N'-methylene bisacrylamide, which were combined with three compositions (5, 10, and 20 mM) of Tetrakis (hydroxymethyl) phosphonium chloride. Results were evaluated using a quantitative evaluation method of the gamma evaluation technique. Results showed that the best-fit RI for the non-irradiated NIPAM gel ranges from 1.340 to 1.346 for various NIPAM recipes with sensitivities ranging from 0.0113 to 0.0227. The greatest pass rate of 88.00% is achieved using best-fit RI=1.346 of the matching liquid. The adoption of mismatching RI decreases the gamma pass rate by 2.63% to 16.75% for all three recipes of NIPAM gel dosimeters. In addition, the maximum average deviation is less than 0.1% for the red and transparent matching liquids. Thus, the color of the matching liquid does not affect the measurement accuracy of the NIPAM gel dosimeter, as measured by optical CT.

  11. A new technique of recognition for coded targets in optical 3D measurement

    NASA Astrophysics Data System (ADS)

    Guo, Changye; Cheng, Xiaosheng; Cui, Haihua; Dai, Ning; Weng, Jinping

    2014-11-01

    A new technique for coded targets recognition in optical 3D-measurement application is proposed in this paper. Traditionally, point cloud registration is based on homologous features, such as the curvature, which is time-consuming and not reliable. For this, we paste some coded targets onto the surface of the object to be measured to improve the optimum target location and accurate correspondence among multi-source images. Circular coded targets are used, and an algorithm to automatically detecting them is proposed. This algorithm extracts targets with intensive bimodal histogram features from complex background, and filters noise according to their size, shape and intensity. In addition, the coded targets' identification is conducted out by their ring codes. We affine them around the circle inversely, set foreground and background respectively as 1 and 0 to constitute a binary number, and finally shift one bit every time to calculate a decimal one of the binary number to determine a minimum decimal number as its code. In this 3Dmeasurement application, we build a mutual relationship between different viewpoints containing three or more coded targets with different codes. Experiments show that it is of efficiency to obtain global surface data of an object to be measured and is robust to the projection angles and noise.

  12. Real Time Gabor-Domain Optical Coherence Microscopy for 3D Imaging.

    PubMed

    Rolland, Jannick P; Canavesi, Cristina; Tankam, Patrice; Cogliati, Andrea; Lanis, Mara; Santhanam, Anand P

    2016-01-01

    Fast, robust, nondestructive 3D imaging is needed for the characterization of microscopic tissue structures across various clinical applications. A custom microelectromechanical system (MEMS)-based 2D scanner was developed to achieve, together with a multi-level GPU architecture, 55 kHz fast-axis A-scan acquisition in a Gabor-domain optical coherence microscopy (GD-OCM) custom instrument. GD-OCM yields high-definition micrometer-class volumetric images. A dynamic depth of focusing capability through a bio-inspired liquid lens-based microscope design, as in whales' eyes, was developed to enable the high definition instrument throughout a large field of view of 1 mm3 volume of imaging. Developing this technology is prime to enable integration within the workflow of clinical environments. Imaging at an invariant resolution of 2 μm has been achieved throughout a volume of 1 × 1 × 0.6 mm3, acquired in less than 2 minutes. Volumetric scans of human skin in vivo and an excised human cornea are presented. PMID:27046601

  13. Combining 3D optical imaging and dual energy absorptiometry to measure three compositional components.

    PubMed

    Malkov, Serghei; Shepherd, John

    2014-02-17

    We report on the design of the technique combining 3D optical imaging and dual-energy absorptiometry body scanning to estimate local body area compositions of three compartments. Dual-energy attenuation and body shape measures are used together to solve for the three compositional tissue thicknesses: water, lipid, and protein. We designed phantoms with tissue-like properties as our reference standards for calibration purposes. The calibration was created by fitting phantom values using non-linear regression of quadratic and truncated polynomials. Dual-energy measurements were performed on tissue-mimicking phantoms using a bone densitometer unit. The phantoms were made of materials shown to have similar x-ray attenuation properties of the biological compositional compartments. The components for the solid phantom were tested and their high energy/low energy attenuation ratios are in good correspondent to water, lipid, and protein for the densitometer x-ray region. The three-dimensional body shape was reconstructed from the depth maps generated by Microsoft Kinect for Windows. We used open-source Point Cloud Library and freeware software to produce dense point clouds. Accuracy and precision of compositional and thickness measures were calculated. The error contributions due to two modalities were estimated. The preliminary phantom composition and shape measurements are found to demonstrate the feasibility of the method proposed.

  14. Automated multilayer segmentation and characterization in 3D spectral-domain optical coherence tomography images

    NASA Astrophysics Data System (ADS)

    Hu, Zhihong; Wu, Xiaodong; Hariri, Amirhossein; Sadda, SriniVas R.

    2013-03-01

    Spectral-domain optical coherence tomography (SD-OCT) is a 3-D imaging technique, allowing direct visualization of retinal morphology and architecture. The various layers of the retina may be affected differentially by various diseases. In this study, an automated graph-based multilayer approach was developed to sequentially segment eleven retinal surfaces including the inner retinal bands to the outer retinal bands in normal SD-OCT volume scans at three different stages. For stage 1, the four most detectable and/or distinct surfaces were identified in the four-times-downsampled images and were used as a priori positional information to limit the graph search for other surfaces at stage 2. Eleven surfaces were then detected in the two-times-downsampled images at stage 2, and refined in the original image space at stage 3 using the graph search integrating the estimated morphological shape models. Twenty macular SD-OCT (Heidelberg Spectralis) volume scans from 20 normal subjects (one eye per subject) were used in this study. The overall mean and absolute mean differences in border positions between the automated and manual segmentation for all 11 segmented surfaces were -0.20 +/- 0.53 voxels (-0.76 +/- 2.06 μm) and 0.82 +/- 0.64 voxels (3.19 +/- 2.46 μm). Intensity and thickness properties in the resultant retinal layers were investigated. This investigation in normal subjects may provide a comparative reference for subsequent investigations in eyes with disease.

  15. Combining 3D optical imaging and dual energy absorptiometry to measure three compositional components

    PubMed Central

    Malkov, Serghei; Shepherd, John

    2014-01-01

    We report on the design of the technique combining 3D optical imaging and dual-energy absorptiometry body scanning to estimate local body area compositions of three compartments. Dual-energy attenuation and body shape measures are used together to solve for the three compositional tissue thicknesses: water, lipid, and protein. We designed phantoms with tissue-like properties as our reference standards for calibration purposes. The calibration was created by fitting phantom values using non-linear regression of quadratic and truncated polynomials. Dual-energy measurements were performed on tissue-mimicking phantoms using a bone densitometer unit. The phantoms were made of materials shown to have similar x-ray attenuation properties of the biological compositional compartments. The components for the solid phantom were tested and their high energy/low energy attenuation ratios are in good correspondent to water, lipid, and protein for the densitometer x-ray region. The three-dimensional body shape was reconstructed from the depth maps generated by Microsoft Kinect for Windows. We used open-source Point Cloud Library and freeware software to produce dense point clouds. Accuracy and precision of compositional and thickness measures were calculated. The error contributions due to two modalities were estimated. The preliminary phantom composition and shape measurements are found to demonstrate the feasibility of the method proposed. PMID:25083118

  16. Combining 3D optical imaging and dual energy absorptiometry to measure three compositional components

    NASA Astrophysics Data System (ADS)

    Malkov, Serghei; Shepherd, John

    2014-02-01

    We report on the design of the technique combining 3D optical imaging and dual-energy absorptiometry body scanning to estimate local body area compositions of three compartments. Dual-energy attenuation and body shape measures are used together to solve for the three compositional tissue thicknesses: water, lipid, and protein. We designed phantoms with tissue-like properties as our reference standards for calibration purposes. The calibration was created by fitting phantom values using non-linear regression of quadratic and truncated polynomials. Dual-energy measurements were performed on tissue-mimicking phantoms using a bone densitometer unit. The phantoms were made of materials shown to have similar x-ray attenuation properties of the biological compositional compartments. The components for the solid phantom were tested and their high energy/low energy attenuation ratios are in good correspondent to water, lipid, and protein for the densitometer x-ray region. The three-dimensional body shape was reconstructed from the depth maps generated by Microsoft Kinect for Windows. We used open-source Point Cloud Library and freeware software to produce dense point clouds. Accuracy and precision of compositional and thickness measures were calculated. The error contributions due to two modalities were estimated. The preliminary phantom composition and shape measurements are found to demonstrate the feasibility of the method proposed.

  17. Large area 3-D optical coherence tomography imaging of lumpectomy specimens for radiation treatment planning

    NASA Astrophysics Data System (ADS)

    Wang, Cuihuan; Kim, Leonard; Barnard, Nicola; Khan, Atif; Pierce, Mark C.

    2016-02-01

    Our long term goal is to develop a high-resolution imaging method for comprehensive assessment of tissue removed during lumpectomy procedures. By identifying regions of high-grade disease within the excised specimen, we aim to develop patient-specific post-operative radiation treatment regimens. We have assembled a benchtop spectral-domain optical coherence tomography (SD-OCT) system with 1320 nm center wavelength. Automated beam scanning enables "sub-volumes" spanning 5 mm x 5 mm x 2 mm (500 A-lines x 500 B-scans x 2 mm in depth) to be collected in under 15 seconds. A motorized sample positioning stage enables multiple sub-volumes to be acquired across an entire tissue specimen. Sub-volumes are rendered from individual B-scans in 3D Slicer software and en face (XY) images are extracted at specific depths. These images are then tiled together using MosaicJ software to produce a large area en face view (up to 40 mm x 25 mm). After OCT imaging, specimens were sectioned and stained with HE, allowing comparison between OCT image features and disease markers on histopathology. This manuscript describes the technical aspects of image acquisition and reconstruction, and reports initial qualitative comparison between large area en face OCT images and HE stained tissue sections. Future goals include developing image reconstruction algorithms for mapping an entire sample, and registering OCT image volumes with clinical CT and MRI images for post-operative treatment planning.

  18. Optical absorption enhancement in 3D silicon oxide nano-sandwich type solar cell.

    PubMed

    Kiani, Amirkianoosh; Venkatakrishnan, Krishnan; Tan, Bo

    2014-01-13

    Recent research in the field of photovoltaic and solar cell fabrication has shown the potential to significantly enhance light absorption in thin-film solar cells by using surface texturing and nanostructure coating techniques. In this paper, for the first time, we propose a new method for nano sandwich type thin-film solar cell fabrication by combining the laser amorphization (2nd solar cell generation) and laser nanofibers generation (3rd solar cell generation) techniques. In this novel technique, the crystalline silicon is irradiated by megahertz frequency femtosecond laser pulses under ambient conditions and the multi-layer of amorphorized silicon and nano fibrous layer are generated in the single-step on top of the silicon substrate. Light spectroscopy results show significant enhancement of light absorption in the generated multi layers solar cells (Silicon Oxide nanofibers / thin-film amorphorized silicon). This method is single step and no additional materials are added and both layers of the amorphorized thin-film silicon and three-dimensional (3D) silicon oxide nanofibrous structures are grown on top of the silicon substrate after laser irradiation. Finally, we suggest how to maximize the light trapping and optical absorption of the generated nanofibers/thin-film cells by optimizing the laser pulse duration. PMID:24921988

  19. Neutral gas heating via non-resonant optical lattices

    NASA Astrophysics Data System (ADS)

    Cornella, Barry Michael

    The influence of intense optical lattices on atoms or molecules offers a particularly useful method for energy and momentum deposition into a non-resonant gas. In this investigation, a proof-of-concept experiment was conducted to validate high intensity pulsed optical lattices as a means of creating high temperature gases for a myriad of aerospace, basic physics, and nanotechnology applications. Traditional methods for creating these flows have either involved altering the chemical composition of the initial gas sample through combustion or ionization or relied on laser resonant interactions with internal energy modes through laser pyrolysis. Due to its non-resonant nature, the use of optical lattices might be beneficial compared to existing methods since it provides an arbitrary, localized, high temperature gas that is tunable and does not introduce unwanted chemical species or high ionization concentrations. As an intermediate step toward verifying optical lattice gas heating, a coherent Rayleigh-Brillouin scattering (CRBS) study was also performed to verify the presented methodology. CRBS is a gas diagnostic technique used for non-intrusive probing of gas thermodynamic properties. In addition to the experimental investigation, a complementary numerical study was conducted using a direct simulation Monte Carlo approach. The numerical study used a modified version of SMILE to predict the gas phenomena within the strong optical potential fields. The goal of substantiating optical lattice heating was accomplished by detecting the acoustic wave generated from the heated volume. The magnitude of the resulting acoustic wave was shown to vary with the optical lattice phase velocity, peaking on the order of the gas' most probable speed. The trend with lattice velocity is consistent with both theory and the numerical study and eliminates other possible heating mechanisms such as laser-induced ionization or molecular dissociation. Limitations for the investigated heating

  20. Dissipation-Induced Symmetry Breaking in a Driven Optical Lattice

    SciTech Connect

    Gommers, R.; Bergamini, S.; Renzoni, F.

    2005-08-12

    We analyze the atomic dynamics in an ac driven periodic optical potential which is symmetric in both time and space. We experimentally demonstrate that in the presence of dissipation the symmetry is broken, and a current of atoms through the optical lattice is generated as a result.

  1. Monolithically Integrated InGaAs Nanowires on 3D Structured Silicon-on-Insulator as a New Platform for Full Optical Links.

    PubMed

    Kim, Hyunseok; Farrell, Alan C; Senanayake, Pradeep; Lee, Wook-Jae; Huffaker, Diana L

    2016-03-01

    Monolithically integrated III-V semiconductors on a silicon-on-insulator (SOI) platform can be used as a building block for energy-efficient on-chip optical links. Epitaxial growth of III-V semiconductors on silicon, however, has been challenged by the large mismatches in lattice constants and thermal expansion coefficients between epitaxial layers and silicon substrates. Here, we demonstrate for the first time the monolithic integration of InGaAs nanowires on the SOI platform and its feasibility for photonics and optoelectronic applications. InGaAs nanowires are grown not only on a planar SOI layer but also on a 3D structured SOI layer by catalyst-free metal-organic chemical vapor deposition. The precise positioning of nanowires on 3D structures, including waveguides and gratings, reveals the versatility and practicality of the proposed platform. Photoluminescence measurements exhibit that the composition of ternary InGaAs nanowires grown on the SOI layer has wide tunability covering all telecommunication wavelengths from 1.2 to 1.8 μm. We also show that the emission from an optically pumped single nanowire is effectively coupled and transmitted through an SOI waveguide, explicitly showing that this work lays the foundation for a new platform toward energy-efficient optical links.

  2. Monolithically Integrated InGaAs Nanowires on 3D Structured Silicon-on-Insulator as a New Platform for Full Optical Links.

    PubMed

    Kim, Hyunseok; Farrell, Alan C; Senanayake, Pradeep; Lee, Wook-Jae; Huffaker, Diana L

    2016-03-01

    Monolithically integrated III-V semiconductors on a silicon-on-insulator (SOI) platform can be used as a building block for energy-efficient on-chip optical links. Epitaxial growth of III-V semiconductors on silicon, however, has been challenged by the large mismatches in lattice constants and thermal expansion coefficients between epitaxial layers and silicon substrates. Here, we demonstrate for the first time the monolithic integration of InGaAs nanowires on the SOI platform and its feasibility for photonics and optoelectronic applications. InGaAs nanowires are grown not only on a planar SOI layer but also on a 3D structured SOI layer by catalyst-free metal-organic chemical vapor deposition. The precise positioning of nanowires on 3D structures, including waveguides and gratings, reveals the versatility and practicality of the proposed platform. Photoluminescence measurements exhibit that the composition of ternary InGaAs nanowires grown on the SOI layer has wide tunability covering all telecommunication wavelengths from 1.2 to 1.8 μm. We also show that the emission from an optically pumped single nanowire is effectively coupled and transmitted through an SOI waveguide, explicitly showing that this work lays the foundation for a new platform toward energy-efficient optical links. PMID:26901448

  3. Feasibility study on 3-D shape analysis of high-aspect-ratio features using through-focus scanning optical microscopy

    PubMed Central

    Attota, Ravi Kiran; Weck, Peter; Kramar, John A.; Bunday, Benjamin; Vartanian, Victor

    2016-01-01

    In-line metrologies currently used in the semiconductor industry are being challenged by the aggressive pace of device scaling and the adoption of novel device architectures. Metrology and process control of three-dimensional (3-D) high-aspect-ratio (HAR) features are becoming increasingly important and also challenging. In this paper we present a feasibility study of through-focus scanning optical microscopy (TSOM) for 3-D shape analysis of HAR features. TSOM makes use of 3-D optical data collected using a conventional optical microscope for 3-D shape analysis. Simulation results of trenches and holes down to the 11 nm node are presented. The ability of TSOM to analyze an array of HAR features or a single isolated HAR feature is also presented. This allows for the use of targets with area over 100 times smaller than that of conventional gratings, saving valuable real estate on the wafers. Indications are that the sensitivity of TSOM may match or exceed the International Technology Roadmap for Semiconductors (ITRS) measurement requirements for the next several years. Both simulations and preliminary experimental results are presented. The simplicity, lowcost, high throughput, and nanometer scale 3-D shape sensitivity of TSOM make it an attractive inspection and process monitoring solution for nanomanufacturing. PMID:27464112

  4. Feasibility study on 3-D shape analysis of high-aspect-ratio features using through-focus scanning optical microscopy.

    PubMed

    Attota, Ravi Kiran; Weck, Peter; Kramar, John A; Bunday, Benjamin; Vartanian, Victor

    2016-07-25

    In-line metrologies currently used in the semiconductor industry are being challenged by the aggressive pace of device scaling and the adoption of novel device architectures. Metrology and process control of three-dimensional (3-D) high-aspect-ratio (HAR) features are becoming increasingly important and also challenging. In this paper we present a feasibility study of through-focus scanning optical microscopy (TSOM) for 3-D shape analysis of HAR features. TSOM makes use of 3-D optical data collected using a conventional optical microscope for 3-D shape analysis. Simulation results of trenches and holes down to the 11 nm node are presented. The ability of TSOM to analyze an array of HAR features or a single isolated HAR feature is also presented. This allows for the use of targets with area over 100 times smaller than that of conventional gratings, saving valuable real estate on the wafers. Indications are that the sensitivity of TSOM may match or exceed the International Technology Roadmap for Semiconductors (ITRS) measurement requirements for the next several years. Both simulations and preliminary experimental results are presented. The simplicity, lowcost, high throughput, and nanometer scale 3-D shape sensitivity of TSOM make it an attractive inspection and process monitoring solution for nanomanufacturing. PMID:27464112

  5. Measurement of an electron's electric dipole moment using Cs atoms trapped in optical lattices

    NASA Astrophysics Data System (ADS)

    Chin, Cheng; Leiber, Véronique; Vuletić, Vladan; Kerman, Andrew J.; Chu, Steven

    2001-03-01

    We propose to measure the electron's permanent electric dipole moment (EDM) using cesium atoms trapped in a sparsely populated, trichromatic, far blue-detuned three-dimensional (3D) optical lattice. In the proposed configuration, the atoms can be strongly localized near the nodes of the light field and isolated from each other, leading to a strong suppression of the detrimental effects of atom-atom and atom-field interactions. Three linearly polarized standing waves with different frequencies create an effectively linearly polarized 3D optical lattice and lead to a strong reduction of the tensor light shift, which remains a potential source of systematic error. Other systematics concerning external field instability and gradients and higher-order polarizabilities are discussed. Furthermore, auxiliary atoms can be loaded into the same lattices as effective ``comagnetometers'' to monitor various systematic effects, including magnetic-field fluctuations and imperfect electric-field reversal. We estimate that a sensitivity 100 times higher than the current upper bound for the electron's EDM of 4×10-27 e cm can be achieved with the proposed technique.

  6. Twofold PT symmetry in doubly exponential optical lattices

    NASA Astrophysics Data System (ADS)

    Cole, J. T.; Makris, K. G.; Musslimani, Z. H.; Christodoulides, D. N.; Rotter, S.

    2016-01-01

    We introduce a family of non-Hermitian optical potentials that are given in terms of double-exponential periodic functions. The center of PT symmetry is not around zero and the potential satisfies a shifted PT -symmetry relation at two distinct locations. Motivated by wave transmission through thin phase screens and gratings, we examine these refractive index modulations from the perspective of optical lattices that are homogeneous along the propagation direction. The diffraction dynamics, abrupt phase transitions in the eigenvalue spectrum, and exceptional points in the band structure are examined in detail. In addition, the nonlinear properties of wave propagation in Kerr nonlinearity media are studied. In particular, coherent structures such as lattice solitons are numerically identified by applying the spectral renormalization method. The spatial symmetries of such lattice solitons follow the shifted PT -symmetric relations. Furthermore, such lattice solitons have a power threshold and their linear and nonlinear stabilities are critically dependent on their spatial symmetry point.

  7. A mercury optical lattice clock at LNE-SYRTE

    NASA Astrophysics Data System (ADS)

    De Sarlo, L.; Favier, M.; Tyumenev, R.; Bize, S.

    2016-06-01

    We describe the development of an optical lattice clock based on mercury and the results obtained since the 7 th SFSM. We briefly present a new solution for the cooling laser system and an improved lattice trap that allows us to interrogate a few thousand atoms in parallel. This translates into a fractional short term stability of 1.2 x 10-15 at the clock frequency of 1.129 PHz.

  8. Development of a strain analyzer system for sheet metal stamped parts based on an optical 3D digitizer

    NASA Astrophysics Data System (ADS)

    Carasusan, Eusebio; Canal, Fernando

    2003-05-01

    In this paper a new automatic strain analyzer system for sheet metal stamped parts is presented. This device is based on an optic 3D scanner working with structure white light, that performs measurements with high speed and accuracy. This new device can be a very useful tool in manufacturing industry.

  9. Competing anisotropies on 3d sub-lattice of YNi{sub 4–x}Co{sub x}B compounds

    SciTech Connect

    Caraballo Vivas, R. J.; Rocco, D. L.; Reis, M. S.; Caldeira, L.; Coelho, A. A.

    2014-08-14

    The magnetic anisotropy of 3d sub-lattices has an important rule on the overall magnetic properties of hard magnets. Intermetallics alloys with boron (R-Co/Ni-B, for instance) belong to those hard magnets family and are useful objects to help to understand the magnetic behavior of 3d sub-lattice, specially when the rare earth ions R do not have magnetic nature, like YCo{sub 4}B ferromagnetic material. Interestingly, YNi{sub 4}B is a paramagnetic material and Ni ions do not contribute to the magnetic anisotropy. We focused therefore our attention to YNi{sub 4–x}Co{sub x}B series, with x = 0, 1, 2, 3, and 4. The magnetic anisotropy of these compounds is deeper described using statistical and preferential models of Co occupation among the possible Wyckoff positions into the CeCo{sub 4}B type hexagonal structure. We found that the preferential model is the most suitable to explain the magnetization experimental data.

  10. Characterization of 3D printing output using an optical sensing system

    NASA Astrophysics Data System (ADS)

    Straub, Jeremy

    2015-05-01

    This paper presents the experimental design and initial testing of a system to characterize the progress and performance of a 3D printer. The system is based on five Raspberry Pi single-board computers. It collects images of the 3D printed object, which are compared to an ideal model. The system, while suitable for printers of all sizes, can potentially be produced at a sufficiently low cost to allow its incorporation into consumer-grade printers. The efficacy and accuracy of this system is presented and discussed. The paper concludes with a discussion of the benefits of being able to characterize 3D printer performance.

  11. Analysis of 3D-printed metal for rapid-prototyped reflective terahertz optics.

    PubMed

    Headland, Daniel; Withayachumnankul, Withawat; Webb, Michael; Ebendorff-Heidepriem, Heike; Luiten, Andre; Abbott, Derek

    2016-07-25

    We explore the potential of 3D metal printing to realize complex conductive terahertz devices. Factors impacting performance such as printing resolution, surface roughness, oxidation, and material loss are investigated via analytical, numerical, and experimental approaches. The high degree of control offered by a 3D-printed topology is exploited to realize a zone plate operating at 530 GHz. Reflection efficiency at this frequency is found to be over 90%. The high-performance of this preliminary device suggest that 3D metal printing can play a strong role in guided-wave and general beam control devices in the terahertz range. PMID:27464185

  12. Analysis of 3D-printed metal for rapid-prototyped reflective terahertz optics

    NASA Astrophysics Data System (ADS)

    Headland, Daniel; Withayachumnankul, Withawat; Webb, Michael; Ebendorff-Heidepriem, Heike; Luiten, Andre; Abbott, Derek

    2016-07-01

    We explore the potential of 3D metal printing to realize complex conductive terahertz devices. Factors impacting performance such as printing resolution, surface roughness, oxidation, and material loss are investigated via analytical, numerical, and experimental approaches. The high degree of control offered by a 3D-printed topology is exploited to realize a zone plate operating at 530 GHz. Reflection efficiency at this frequency is found to be over 90%. The high-performance of this preliminary device suggest that 3D metal printing can play a strong role in guided-wave and general beam control devices in the terahertz range.

  13. Analysis of 3D-printed metal for rapid-prototyped reflective terahertz optics.

    PubMed

    Headland, Daniel; Withayachumnankul, Withawat; Webb, Michael; Ebendorff-Heidepriem, Heike; Luiten, Andre; Abbott, Derek

    2016-07-25

    We explore the potential of 3D metal printing to realize complex conductive terahertz devices. Factors impacting performance such as printing resolution, surface roughness, oxidation, and material loss are investigated via analytical, numerical, and experimental approaches. The high degree of control offered by a 3D-printed topology is exploited to realize a zone plate operating at 530 GHz. Reflection efficiency at this frequency is found to be over 90%. The high-performance of this preliminary device suggest that 3D metal printing can play a strong role in guided-wave and general beam control devices in the terahertz range.

  14. 3D imaging of cone photoreceptors over extended time periods using optical coherence tomography with adaptive optics

    NASA Astrophysics Data System (ADS)

    Kocaoglu, Omer P.; Lee, Sangyeol; Jonnal, Ravi S.; Wang, Qiang; Herde, Ashley E.; Besecker, Jason; Gao, Weihua; Miller, Donald T.

    2011-03-01

    Optical coherence tomography with adaptive optics (AO-OCT) is a highly sensitive, noninvasive method for 3D imaging of the microscopic retina. The purpose of this study is to advance AO-OCT technology by enabling repeated imaging of cone photoreceptors over extended periods of time (days). This sort of longitudinal imaging permits monitoring of 3D cone dynamics in both normal and diseased eyes, in particular the physiological processes of disc renewal and phagocytosis, which are disrupted by retinal diseases such as age related macular degeneration and retinitis pigmentosa. For this study, the existing AO-OCT system at Indiana underwent several major hardware and software improvements to optimize system performance for 4D cone imaging. First, ultrahigh speed imaging was realized using a Basler Sprint camera. Second, a light source with adjustable spectrum was realized by integration of an Integral laser (Femto Lasers, λc=800nm, ▵λ=160nm) and spectral filters in the source arm. For cone imaging, we used a bandpass filter with λc=809nm and ▵λ=81nm (2.6 μm nominal axial resolution in tissue, and 167 KHz A-line rate using 1,408 px), which reduced the impact of eye motion compared to previous AO-OCT implementations. Third, eye motion artifacts were further reduced by custom ImageJ plugins that registered (axially and laterally) the volume videos. In two subjects, cone photoreceptors were imaged and tracked over a ten day period and their reflectance and outer segment (OS) lengths measured. High-speed imaging and image registration/dewarping were found to reduce eye motion to a fraction of a cone width (1 μm root mean square). The pattern of reflections in the cones was found to change dramatically and occurred on a spatial scale well below the resolution of clinical instruments. Normalized reflectance of connecting cilia (CC) and OS posterior tip (PT) of an exemplary cone was 54+/-4, 47+/-4, 48+/-6, 50+/-5, 56+/-1% and 46+/-4, 53+/-4, 52+/-6, 50+/-5, 44

  15. 3-D segmentation of retinal blood vessels in spectral-domain OCT volumes of the optic nerve head

    NASA Astrophysics Data System (ADS)

    Lee, Kyungmoo; Abràmoff, Michael D.; Niemeijer, Meindert; Garvin, Mona K.; Sonka, Milan

    2010-03-01

    Segmentation of retinal blood vessels can provide important information for detecting and tracking retinal vascular diseases including diabetic retinopathy, arterial hypertension, arteriosclerosis and retinopathy of prematurity (ROP). Many studies on 2-D segmentation of retinal blood vessels from a variety of medical images have been performed. However, 3-D segmentation of retinal blood vessels from spectral-domain optical coherence tomography (OCT) volumes, which is capable of providing geometrically accurate vessel models, to the best of our knowledge, has not been previously studied. The purpose of this study is to develop and evaluate a method that can automatically detect 3-D retinal blood vessels from spectral-domain OCT scans centered on the optic nerve head (ONH). The proposed method utilized a fast multiscale 3-D graph search to segment retinal surfaces as well as a triangular mesh-based 3-D graph search to detect retinal blood vessels. An experiment on 30 ONH-centered OCT scans (15 right eye scans and 15 left eye scans) from 15 subjects was performed, and the mean unsigned error in 3-D of the computer segmentations compared with the independent standard obtained from a retinal specialist was 3.4 +/- 2.5 voxels (0.10 +/- 0.07 mm).

  16. Optical low-cost and portable arrangement for full field 3D displacement measurement using a single camera

    NASA Astrophysics Data System (ADS)

    López-Alba, E.; Felipe-Sesé, L.; Schmeer, S.; Díaz, F. A.

    2016-11-01

    In the current paper, an optical low-cost system for 3D displacement measurement based on a single camera and 3D digital image correlation is presented. The conventional 3D-DIC set-up based on a two-synchronized-cameras system is compared with a proposed pseudo-stereo portable system that employs a mirror system integrated in a device for a straightforward application achieving a novel handle and flexible device for its use in many scenarios. The proposed optical system splits the image by the camera into two stereo images of the object. In order to validate this new approach and quantify its uncertainty compared to traditional 3D-DIC systems, solid rigid in and out-of-plane displacements experiments have been performed and analyzed. The differences between both systems have been studied employing an image decomposition technique which performs a full image comparison. Therefore, results of all field of view are compared with those using a stereoscopy system and 3D-DIC, discussing the accurate results obtained with the proposed device not having influence any distortion or aberration produced by the mirrors. Finally, the adaptability of the proposed system and its accuracy has been tested performing quasi-static and dynamic experiments using a silicon specimen under high deformation. Results have been compared and validated with those obtained from a conventional stereoscopy system showing an excellent level of agreement.

  17. Coupled matter-wave solitons in optical lattices

    SciTech Connect

    Golam Ali, Sk; Talukdar, B.

    2009-06-15

    We make use of a potential model to study the dynamics of two coupled matter-wave or Bose-Einstein condensate (BEC) solitons loaded in optical lattices. With separate attention to linear and nonlinear lattices we find some remarkable differences for response of the system to effects of these lattices. As opposed to the case of linear optical lattice (LOL), the nonlinear lattice (NOL) can be used to control the mutual interaction between the two solitons. For a given lattice wave number k, the effective potentials in which the two solitons move are such that the well (V{sub eff}(NOL)), resulting from the juxtaposition of soliton interaction and nonlinear lattice potential, is deeper than the corresponding well V{sub eff}(LOL). But these effective potentials have opposite k dependence in the sense that the depth of V{sub eff}(LOL) increases as k increases and that of V{sub eff}(NOL) decreases for higher k values. We verify that the effectiveness of optical lattices to regulate the motion of the coupled solitons depends sensitively on the initial locations of the motionless solitons as well as values of the lattice wave number. For both LOL and NOL the two solitons meet each other due to mutual interaction if their initial locations are taken within the potential wells with the difference that the solitons in the NOL approach each other rather rapidly and take roughly half the time to meet as compared with the time needed for such coalescence in the LOL. In the NOL, the soliton profiles can move freely and respond to the lattice periodicity when the separation between their initial locations are as twice as that needed for a similar free movement in the LOL. We observe that, in both cases, slow tuning of the optical lattices by varying k with respect to a time parameter {tau} drags the oscillatory solitons apart to take them to different locations. In our potential model the oscillatory solitons appear to propagate undistorted. But a fully numerical calculation

  18. Coupled matter-wave solitons in optical lattices

    NASA Astrophysics Data System (ADS)

    Golam Ali, Sk; Talukdar, B.

    2009-06-01

    We make use of a potential model to study the dynamics of two coupled matter-wave or Bose-Einstein condensate (BEC) solitons loaded in optical lattices. With separate attention to linear and nonlinear lattices we find some remarkable differences for response of the system to effects of these lattices. As opposed to the case of linear optical lattice (LOL), the nonlinear lattice (NOL) can be used to control the mutual interaction between the two solitons. For a given lattice wave number k, the effective potentials in which the two solitons move are such that the well (Veff(NOL)), resulting from the juxtaposition of soliton interaction and nonlinear lattice potential, is deeper than the corresponding well Veff(LOL). But these effective potentials have opposite k dependence in the sense that the depth of Veff(LOL) increases as k increases and that of Veff(NOL) decreases for higher k values. We verify that the effectiveness of optical lattices to regulate the motion of the coupled solitons depends sensitively on the initial locations of the motionless solitons as well as values of the lattice wave number. For both LOL and NOL the two solitons meet each other due to mutual interaction if their initial locations are taken within the potential wells with the difference that the solitons in the NOL approach each other rather rapidly and take roughly half the time to meet as compared with the time needed for such coalescence in the LOL. In the NOL, the soliton profiles can move freely and respond to the lattice periodicity when the separation between their initial locations are as twice as that needed for a similar free movement in the LOL. We observe that, in both cases, slow tuning of the optical lattices by varying k with respect to a time parameter τ drags the oscillatory solitons apart to take them to different locations. In our potential model the oscillatory solitons appear to propagate undistorted. But a fully numerical calculation indicates that during evolution

  19. Isospin correlations in two-partite hexagonal optical lattices

    NASA Astrophysics Data System (ADS)

    Prada, Marta; Richter, Eva-Maria; Pfannkuche, Daniela

    2014-07-01

    Two-component mixtures in optical lattices reveal a rich variety of different phases. We employ an exact diagonalization method to obtain the relevant correlation functions in hexagonal optical lattices which characterize those phases. We relate the occupation difference of the two species to the magnetic polarization. "Iso" -magnetic correlations disclose the nature of the system, which can be of easy-axis type, bearing phase segregation, or of easy-plane type, corresponding to super-counter-fluidity. In the latter case, the correlations reveal easy-plane segregation, involving a highly entangled state. We identify striking correlated supersolid phases appearing within the superfluid limit.

  20. Physics of higher orbital bands in optical lattices: a review

    NASA Astrophysics Data System (ADS)

    Li, Xiaopeng; Liu, W. Vincent

    2016-11-01

    The orbital degree of freedom plays a fundamental role in understanding the unconventional properties in solid state materials. Experimental progress in quantum atomic gases has demonstrated that high orbitals in optical lattices can be used to construct quantum emulators of exotic models beyond natural crystals, where novel many-body states such as complex Bose-Einstein condensates and topological semimetals emerge. A brief introduction of orbital degrees of freedom in optical lattices is given and a summary of exotic orbital models and resulting many-body phases is provided. Experimental consequences of the novel phases are also discussed.

  1. Bose-Fermi mixtures in an optical lattice

    SciTech Connect

    Sengupta, K.; Majumdar, P.

    2007-06-15

    We study an atomic Bose-Fermi mixture with unpolarized fermions in an optical lattice. We obtain the Mott ground states of such a system in the limit of the deep optical lattice and discuss the effect of quantum fluctuations on these states. We also study the superfluid-insulator transitions of bosons and metal-insulator transition of fermions in such a mixture within a slave-rotor mean-field approximation, and obtain the corresponding phase diagram. We discuss experimental implications of our results.

  2. Nondestructive testing of 3D disperse systems with micro- and nano-particles: N-dimensional space of optical parameters

    NASA Astrophysics Data System (ADS)

    Bezrukova, Alexandra G.

    2006-04-01

    The simultaneous analysis of 3D disperse systems (DS) with micro- and nano- particles by refractometry, absorbency, fluorescence and by different types of light scattering, can help to elaborate the sensing elements for specffic impurity control. Our research has investigated by complex of optical methods different 3D DS such as: proteins, nucleoproteids, lipoproteids, liposomes, viruses, virosomes, lipid emulsions, blood substitutes, latexes, liquid crystals, biological cells with various form and size (including bacterial cells), metallic powders, clays, kimberlites, zeolites, oils, crude oils, samples of natural and water-supply waters, etc. This experience suggests that each 3D DS can be charactensed by N-dimensional vector in N-dimensional space of optical parameters. Due to the fusion of various optical data it is possible to solve the inverse physical problem on the presence of impurity in mixtures of 3D DS by information statistical theory methods. It is important that in this case polymodality of particle size distribution is not an obstacle.

  3. Analytic 3D imaging of mammalian nucleus at nanoscale using coherent x-rays and optical fluorescence microscopy.

    PubMed

    Song, Changyong; Takagi, Masatoshi; Park, Jaehyun; Xu, Rui; Gallagher-Jones, Marcus; Imamoto, Naoko; Ishikawa, Tetsuya

    2014-09-01

    Despite the notable progress that has been made with nano-bio imaging probes, quantitative nanoscale imaging of multistructured specimens such as mammalian cells remains challenging due to their inherent structural complexity. Here, we successfully performed three-dimensional (3D) imaging of mammalian nuclei by combining coherent x-ray diffraction microscopy, explicitly visualizing nuclear substructures at several tens of nanometer resolution, and optical fluorescence microscopy, cross confirming the substructures with immunostaining. This demonstrates the successful application of coherent x-rays to obtain the 3D ultrastructure of mammalian nuclei and establishes a solid route to nanoscale imaging of complex specimens.

  4. Stability of matter-wave solitons in optical lattices

    NASA Astrophysics Data System (ADS)

    Ali, Sk. Golam; Roy, S. K.; Talukdar, B.

    2010-08-01

    We consider localized states of both single- and two-component Bose-Einstein condensates (BECs) confined in a potential resulting from the superposition of linear and nonlinear optical lattices and make use of Vakhitov-Kolokolov criterion to investigate the effect of nonlinear lattice on the stability of the soliton solutions in the linear optical lattice (LOL). For the single-component case we show that a weak nonlinear lattice has very little effect on the stability of such solitons while sufficiently strong nonlinear optical lattice (NOL) squeezes them to produce narrow bound states. For two-component condensates we find that when the strength of the NOL (γ1) is less than that of the LOL (V0) a relatively weak intra-atomic interaction (IAI) has little effect on the stability of the component solitons. This is true for both attractive and repulsive IAI. A strong attractive IAI, however, squeezes the BEC solitons while a similar repulsive IAI makes the component solitons wider. For γ1 > V0, only a strong attractive IAI squeezes the BEC solitons but the squeezing effect is less prominent than that found for γ1 < V0. We make useful checks on the results of our semianalytical stability analysis by solving the appropriate Gross-Pitaevskii equations numerically.

  5. Mixtures of bosonic and fermionic atoms in optical lattices

    SciTech Connect

    Albus, Alexander; Illuminati, Fabrizio; Eisert, Jens

    2003-08-01

    We discuss the theory of mixtures of bosonic and fermionic atoms in periodic potentials at zero temperature. We derive a general Bose-Fermi Hubbard Hamiltonian in a one-dimensional optical lattice with a superimposed harmonic trapping potential. We study the conditions for linear stability of the mixture and derive a mean-field criterion for the onset of a bosonic superfluid transition. We investigate the ground-state properties of the mixture in the Gutzwiller formulation of mean-field theory, and present numerical studies of finite systems. The bosonic and fermionic density distributions and the onset of quantum phase transitions to demixing and to a bosonic Mott-insulator are studied as a function of the lattice potential strength. The existence is predicted of a disordered phase for mixtures loaded in very deep lattices. Such a disordered phase possessing many degenerate or quasidegenerate ground states is related to a breaking of the mirror symmetry in the lattice.

  6. Optical lattice polarization effects on magnetically induced optical atomic clock transitions

    SciTech Connect

    Taichenachev, A. V.; Yudin, V. I.; Oates, C. W.

    2007-08-15

    We derive the frequency shift for a forbidden optical transition J=0{yields}J{sup '}=0 caused by the simultaneous actions of an elliptically polarized lattice field and a static magnetic field. We find that a simple configuration of lattice and magnetic fields leads to a cancellation of this shift to first order in lattice intensity and magnetic field. In this geometry, the second-order lattice intensity shift can be minimized as well by use of optimal lattice polarization. Suppression of these shifts could considerably enhance the performance of the next generation of atomic clocks.

  7. A compact acousto-optic lens for 2D and 3D femtosecond based 2-photon microscopy

    PubMed Central

    Kirkby, Paul A.; Naga Srinivas, N.K.M.; Silver, R. Angus

    2010-01-01

    We describe a high speed 3D Acousto-Optic Lens Microscope (AOLM) for femtosecond 2-photon imaging. By optimizing the design of the 4 AO Deflectors (AODs) and by deriving new control algorithms, we have developed a compact spherical AOL with a low temporal dispersion that enables 2-photon imaging at 10-fold lower power than previously reported. We show that the AOLM can perform high speed 2D raster-scan imaging (>150 Hz) without scan rate dependent astigmatism. It can deflect and focus a laser beam in a 3D random access sequence at 30 kHz and has an extended focusing range (>137 μm; 40X 0.8NA objective). These features are likely to make the AOLM a useful tool for studying fast physiological processes distributed in 3D space PMID:20588506

  8. Veselago lensing with ultracold atoms in an optical lattice.

    PubMed

    Leder, Martin; Grossert, Christopher; Weitz, Martin

    2014-01-01

    Veselago pointed out that electromagnetic wave theory allows for materials with a negative index of refraction, in which most known optical phenomena would be reversed. A slab of such a material can focus light by negative refraction, an imaging technique strikingly different from conventional positive refractive index optics, where curved surfaces bend the rays to form an image of an object. Here we demonstrate Veselago lensing for matter waves, using ultracold atoms in an optical lattice. A relativistic, that is, photon-like, dispersion relation for rubidium atoms is realized with a bichromatic optical lattice potential. We rely on a Raman π-pulse technique to transfer atoms between two different branches of the dispersion relation, resulting in a focusing that is completely analogous to the effect described by Veselago for light waves. Future prospects of the demonstrated effects include novel sub-de Broglie wavelength imaging applications.

  9. Direct Tunneling Delay Time Measurement in an Optical Lattice

    NASA Astrophysics Data System (ADS)

    Fortun, A.; Cabrera-Gutiérrez, C.; Condon, G.; Michon, E.; Billy, J.; Guéry-Odelin, D.

    2016-07-01

    We report on the measurement of the time required for a wave packet to tunnel through the potential barriers of an optical lattice. The experiment is carried out by loading adiabatically a Bose-Einstein condensate into a 1D optical lattice. A sudden displacement of the lattice by a few tens of nanometers excites the micromotion of the dipole mode. We then directly observe in momentum space the splitting of the wave packet at the turning points and measure the delay between the reflected and the tunneled packets for various initial displacements. Using this atomic beam splitter twice, we realize a chain of coherent micron-size Mach-Zehnder interferometers at the exit of which we get essentially a wave packet with a negative momentum, a result opposite to the prediction of classical physics.

  10. Collisional shifts in optical-lattice atom clocks

    SciTech Connect

    Band, Y. B.; Vardi, A.

    2006-09-15

    We theoretically study the effects of elastic collisions on the determination of frequency standards via Ramsey-fringe spectroscopy in optical-lattice atom clocks. Interparticle interactions of bosonic atoms in multiply occupied lattice sites can cause a linear frequency shift, as well as generate asymmetric Ramsey-fringe patterns and reduce fringe visibility due to interparticle entanglement. We propose a method of reducing these collisional effects in an optical lattice by introducing a phase difference of {pi} between the Ramsey driving fields in adjacent sites. This configuration suppresses site-to-site hopping due to interference of two tunneling pathways, without degrading fringe visibility. Consequently, the probability of double occupancy is reduced, leading to cancellation of collisional shifts.

  11. Optical lattice polarization effects on hyperpolarizability of atomic clock transitions.

    PubMed

    Taichenachev, A V; Yudin, V I; Ovsiannikov, V D; Pal'chikov, V G

    2006-10-27

    The light-induced frequency shift due to hyperpolarizability (i.e., terms of second-order in intensity) is studied for a forbidden optical transition, J = 0 --> J = 0. A simple universal dependence on the field ellipticity is obtained. This result allows minimization of the second-order light shift with respect to the field polarization for optical lattices operating at a magic wavelength (at which the first-order shift vanishes). We show the possibility for the existence of a magic elliptical polarization, for which the second-order frequency shift vanishes. The optimal polarization of the lattice field can be either linear, circular, or magic elliptical. The obtained results could improve the accuracy of lattice-based atomic clocks.

  12. Spin-orbit coupling in a strontium optical lattice clock

    NASA Astrophysics Data System (ADS)

    Bothwell, Tobias; Bromley, Sarah; Kolkowitz, Shimon; Zhang, Xibo; Wall, Michael; Rey, Ana Maria; Ye, Jun

    2016-05-01

    Synthetic gauge fields are a promising tool for creating complex Hamiltonians with ultracold neutral atoms that may mimic the fractional Quantum Hall effect and other topological states. A promising approach is to use spin-orbit coupling to treat an internal degree of freedom as an effective `synthetic' spatial dimension. Here, this synthetic dimension is comprised by the internal ground and excited states used for high-precision clock spectroscopy in a fermionic strontium optical lattice clock. We report on our progress towards this goal in a system where atoms tunnel through a 1D optical lattice during clock interrogation. We present measurements of the lattice band structure under varying Lamb-Dicke parameters and in a regime where s-wave collisions are expected to contribute density dependent frequency shifts.

  13. Direct Tunneling Delay Time Measurement in an Optical Lattice.

    PubMed

    Fortun, A; Cabrera-Gutiérrez, C; Condon, G; Michon, E; Billy, J; Guéry-Odelin, D

    2016-07-01

    We report on the measurement of the time required for a wave packet to tunnel through the potential barriers of an optical lattice. The experiment is carried out by loading adiabatically a Bose-Einstein condensate into a 1D optical lattice. A sudden displacement of the lattice by a few tens of nanometers excites the micromotion of the dipole mode. We then directly observe in momentum space the splitting of the wave packet at the turning points and measure the delay between the reflected and the tunneled packets for various initial displacements. Using this atomic beam splitter twice, we realize a chain of coherent micron-size Mach-Zehnder interferometers at the exit of which we get essentially a wave packet with a negative momentum, a result opposite to the prediction of classical physics. PMID:27419545

  14. Excitations of one-dimensional supersolids with optical lattices

    NASA Astrophysics Data System (ADS)

    Hsueh, C.-H.; Tsai, Y.-C.; Wu, W. C.

    2016-06-01

    Based on mean-field Gross-Pitaevskii and Bogoliubov-de Gennes approaches, we investigate excitations of a one-dimensional soft-core interacting ultracold Bose gas under the effect of an optical lattice. It is found that no matter how deep the lattice is, at q →0 the lowest mode corresponds to a gapless phonon, ω12=v12q2 , whereas the second lowest mode corresponds to a gapped optical phonon, ω22=Δ2±v22q2 . Determination of the velocities v1,v2 , the gap Δ , and the possible sign change in ω2 upon the change of lattice depth can give decisive measures to the transitions across various supersolid and solid states. The power law v1˜(fs) 1 /2 with fs the superfluid fraction is identified in the present system at the tight-binding regime.

  15. Atom optics simulator of lattice transport phenomena

    NASA Astrophysics Data System (ADS)

    An, Fangzhao; Meier, Eric; Gadway, Bryce

    2016-05-01

    We report on a novel scheme for studying lattice transport phenomena, based on the controlled momentum-space dynamics of ultracold atomic matter waves. In the effective tight binding models that can be simulated, we demonstrate that this technique allows for a local and time-dependent control over all system parameters, and additionally allows for single-site resolved detection of atomic populations. We demonstrate full control over site-to-site off-diagonal tunneling elements (amplitude and phase) and diagonal site-energies, through the observation of continuous time quantum walks, Bloch oscillations, and negative tunneling. These capabilities open up new prospects in the experimental study of disordered and topological systems.

  16. Atom-molecular oscillations of a Bose gas in an optical lattice

    NASA Astrophysics Data System (ADS)

    Heinzen, Daniel

    2005-05-01

    A Bose gas in an optical lattice can undergo a quantum phase transition between a superfluid and a ``Mott insulator'' state [1]. We have created a Mott insulator state of ^87Rb atoms in an optical lattice with a controllable number of atoms per site, and measured its stimulated Raman photoassociation spectrum. We found that higher density samples exhibited a two-peaked spectrum arising from photoassociation in sites with two and three atoms, respectively. The splitting between these peaks provides a measurement of the atom-molecule scattering length. Raman photoassociation of a sample with a central core of Mott insulator with two atoms per site induced macroscopic coherent oscillations between an atomic and a molecular gas, as predicted by Jaksch et al. [2]. Our result implies that at the point of minimum atom number, we have created a molecular quantum gas with one molecule in each lattice site. In addition, we have carried out Bragg spectroscopy of the gas [3], and found evidence of a gap in the excitation spectrum of the insulating state. This work was carried out in collaboration with C. Ryu, Emek Yesilada, Xu Du, and Shoupu Wan. We acknowledge the support of the R.A. Welch Foundation, the N.S.F., and the D.O.E Quantum Optics Initiative. [1] Markus Greiner et al., Nature 415, 39 (2002). [2] D. Jaksch et al., Phys. Rev. Lett. 89, 040402 (2002). [3] D. Van Oosten et al., cond-mat/0405492 (2004).

  17. 3D papillary image capturing by the stereo fundus camera system for clinical diagnosis on retina and optic nerve

    NASA Astrophysics Data System (ADS)

    Motta, Danilo A.; Serillo, André; de Matos, Luciana; Yasuoka, Fatima M. M.; Bagnato, Vanderlei S.; Carvalho, Luis A. V.

    2014-03-01

    Glaucoma is the second main cause of the blindness in the world and there is a tendency to increase this number due to the lifetime expectation raise of the population. Glaucoma is related to the eye conditions, which leads the damage to the optic nerve. This nerve carries visual information from eye to brain, then, if it has damage, it compromises the visual quality of the patient. In the majority cases the damage of the optic nerve is irreversible and it happens due to increase of intraocular pressure. One of main challenge for the diagnosis is to find out this disease, because any symptoms are not present in the initial stage. When is detected, it is already in the advanced stage. Currently the evaluation of the optic disc is made by sophisticated fundus camera, which is inaccessible for the majority of Brazilian population. The purpose of this project is to develop a specific fundus camera without fluorescein angiography and red-free system to accomplish 3D image of optic disc region. The innovation is the new simplified design of a stereo-optical system, in order to make capable the 3D image capture and in the same time quantitative measurements of excavation and topography of optic nerve; something the traditional fundus cameras do not do. The dedicated hardware and software is developed for this ophthalmic instrument, in order to permit quick capture and print of high resolution 3D image and videos of optic disc region (20° field-of-view) in the mydriatic and nonmydriatic mode.

  18. Large-eddy simulations of 3D Taylor-Green vortex: comparison of Smoothed Particle Hydrodynamics, Lattice Boltzmann and Finite Volume methods

    NASA Astrophysics Data System (ADS)

    Kajzer, A.; Pozorski, J.; Szewc, K.

    2014-08-01

    In the paper we present Large-eddy simulation (LES) results of 3D Taylor- Green vortex obtained by the three different computational approaches: Smoothed Particle Hydrodynamics (SPH), Lattice Boltzmann Method (LBM) and Finite Volume Method (FVM). The Smagorinsky model was chosen as a subgrid-scale closure in LES for all considered methods and a selection of spatial resolutions have been investigated. The SPH and LBM computations have been carried out with the use of the in-house codes executed on GPU and compared, for validation purposes, with the FVM results obtained using the open-source CFD software OpenFOAM. A comparative study in terms of one-point statistics and turbulent energy spectra shows a good agreement of LES results for all methods. An analysis of the GPU code efficiency and implementation difficulties has been made. It is shown that both SPH and LBM may offer a significant advantage over mesh-based CFD methods.

  19. A simulation study of microwave field effects on a 3D orthorhombic lattice of rotating dipoles: short-range potential energy variation

    NASA Astrophysics Data System (ADS)

    Kapranov, Sergey V.; Kouzaev, Guennadi A.

    2016-05-01

    Variation of the short-range potential energy of interaction of nearest dipoles in a three-dimensional (3D) orthorhombic lattice exposed to microwave electric fields is studied by means of the Langevin dynamics simulations. The global increase of the mean potential energy is typical for all the frequencies and intensities at lower temperatures, whereas separate potential energy peaks or peak chains are observed at intermediate temperatures. A simple statistical model proposed to account for the temperature dependence of the field intensity for potential energy peaks suggests the concerted collective rotation of the dipoles. The temperature dependence of the peak frequency is explained using a combination of the one-dimensional Kramers and the resonant activation theories applied to the field-driven collective rotation, with the nearly degenerate angular coordinates of the dipoles being used as a single effective coordinate.

  20. Monitoring adipose-derived stem cells within 3D carrier by combined dielectric spectroscopy and spectral domain optical coherence topography

    NASA Astrophysics Data System (ADS)

    Bagnaninchi, P. O.

    2010-02-01

    Monitoring non-invasively the cellular events in three dimensional carriers is a major challenge for tissue engineering and regenerative medicine that prevents time-lapsed studies over large population of sample. The potential of optical coherence tomography has been demonstrated to assess tissue formation within porous matrices. In this study we explore the combination of dielectric spectroscopy (DS) and spectral domain optical coherence tomography (SDOCT) to quality assess ADSCs loaded in three dimensional carriers. A SDOCT (930nm, FWHM 90nm) was combined to an open ended coaxial probe connected to material analyser, and broadband measurements between 20MHz and 1GHz were synchronized with Labview. Both ADSCs maintained in undifferentiated state within 3D carrier and induced towards osteoblasts were monitored with this multimodality technique and their DS spectra were acquired at high cell concentration simultaneously to 3D imaging. This multimodality technique will be instrumental to assess non-invasively cell loaded carriers for cell therapy.

  1. Quantum fluctuations and Collective Oscillations of a Bose-Einstein Condensate in a 2D Optical Lattice

    SciTech Connect

    Orso, G.; Stringari, S.; Menotti, C.

    2006-11-10

    We use Bogoliubov theory to calculate the beyond mean field correction to the equation of state of a weakly interacting Bose gas in the presence of a tight 2D optical lattice. We show that the lattice induces a characteristic 3D to 1D crossover in the behavior of quantum fluctuations. Using the hydrodynamic theory of superfluids, we calculate the corresponding shift of the collective frequencies of a harmonically trapped gas. We find that this correction can be of the order of a few percent and hence easily measurable in current experiments. The behavior of the quantum depletion of the condensate is also discussed.

  2. Doublon dynamics and polar molecule production in an optical lattice

    NASA Astrophysics Data System (ADS)

    Covey, Jacob P.; Moses, Steven A.; Gärttner, Martin; Safavi-Naini, Arghavan; Miecnikowski, Matthew T.; Fu, Zhengkun; Schachenmayer, Johannes; Julienne, Paul S.; Rey, Ana Maria; Jin, Deborah S.; Ye, Jun

    2016-04-01

    Polar molecules in an optical lattice provide a versatile platform to study quantum many-body dynamics. Here we use such a system to prepare a density distribution where lattice sites are either empty or occupied by a doublon composed of an interacting Bose-Fermi pair. By letting this out-of-equilibrium system evolve from a well-defined, but disordered, initial condition, we observe clear effects on pairing that arise from inter-species interactions, a higher partial-wave Feshbach resonance and excited Bloch-band population. These observations facilitate a detailed understanding of molecule formation in the lattice. Moreover, the interplay of tunnelling and interaction of fermions and bosons provides a controllable platform to study Bose-Fermi Hubbard dynamics. Additionally, we can probe the distribution of the atomic gases in the lattice by measuring the inelastic loss of doublons. These techniques realize tools that are generically applicable to studying the complex dynamics of atomic mixtures in optical lattices.

  3. Doublon dynamics and polar molecule production in an optical lattice

    PubMed Central

    Covey, Jacob P.; Moses, Steven A.; Gärttner, Martin; Safavi-Naini, Arghavan; Miecnikowski, Matthew T.; Fu, Zhengkun; Schachenmayer, Johannes; Julienne, Paul S.; Rey, Ana Maria; Jin, Deborah S.; Ye, Jun

    2016-01-01

    Polar molecules in an optical lattice provide a versatile platform to study quantum many-body dynamics. Here we use such a system to prepare a density distribution where lattice sites are either empty or occupied by a doublon composed of an interacting Bose-Fermi pair. By letting this out-of-equilibrium system evolve from a well-defined, but disordered, initial condition, we observe clear effects on pairing that arise from inter-species interactions, a higher partial-wave Feshbach resonance and excited Bloch-band population. These observations facilitate a detailed understanding of molecule formation in the lattice. Moreover, the interplay of tunnelling and interaction of fermions and bosons provides a controllable platform to study Bose-Fermi Hubbard dynamics. Additionally, we can probe the distribution of the atomic gases in the lattice by measuring the inelastic loss of doublons. These techniques realize tools that are generically applicable to studying the complex dynamics of atomic mixtures in optical lattices. PMID:27075831

  4. Superfluid qubit systems with ring shaped optical lattices.

    PubMed

    Amico, Luigi; Aghamalyan, Davit; Auksztol, Filip; Crepaz, Herbert; Dumke, Rainer; Kwek, Leong Chuan

    2014-01-01

    We study an experimentally feasible qubit system employing neutral atomic currents. Our system is based on bosonic cold atoms trapped in ring-shaped optical lattice potentials. The lattice makes the system strictly one dimensional and it provides the infrastructure to realize a tunable ring-ring interaction. Our implementation combines the low decoherence rates of neutral cold atoms systems, overcoming single site addressing, with the robustness of topologically protected solid state Josephson flux qubits. Characteristic fluctuations in the magnetic fields affecting Josephson junction based flux qubits are expected to be minimized employing neutral atoms as flux carriers. By breaking the Galilean invariance we demonstrate how atomic currents through the lattice provide an implementation of a qubit. This is realized either by artificially creating a phase slip in a single ring, or by tunnel coupling of two homogeneous ring lattices. The single qubit infrastructure is experimentally investigated with tailored optical potentials. Indeed, we have experimentally realized scaled ring-lattice potentials that could host, in principle, n ~ 10 of such ring-qubits, arranged in a stack configuration, along the laser beam propagation axis. An experimentally viable scheme of the two-ring-qubit is discussed, as well. Based on our analysis, we provide protocols to initialize, address, and read-out the qubit.

  5. Heavy fermions in an optical lattice

    SciTech Connect

    Foss-Feig, Michael; Hermele, Michael; Gurarie, Victor; Rey, Ana Maria

    2010-11-15

    We employ a mean-field theory to study ground-state properties and transport of a two-dimensional gas of ultracold alkaline-earth-metal atoms governed by the Kondo lattice Hamiltonian plus a parabolic confining potential. In a homogenous system, this mean-field theory is believed to give a qualitatively correct description of heavy-fermion metals and Kondo insulators: It reproduces the Kondo-like scaling of the quasiparticle mass in the former and the same scaling of the excitation gap in the latter. In order to understand ground-state properties in a trap, we extend this mean-field theory via local-density approximation. We find that the Kondo insulator gap manifests as a shell structure in the trapped density profile. In addition, a strong signature of the large Fermi surface expected for heavy-fermion systems survives the confinement and could be probed in time-of-flight experiments. From a full self-consistent diagonalization of the mean-field theory, we are able to study dynamics in the trap. We find that the mass enhancement of quasiparticle excitations in the heavy-Fermi liquid phase manifests as slowing of the dipole oscillations that result from a sudden displacement of the trap center.

  6. Super-resolution microscopy of single atoms in optical lattices

    NASA Astrophysics Data System (ADS)

    Alberti, Andrea; Robens, Carsten; Alt, Wolfgang; Brakhane, Stefan; Karski, Michał; Reimann, René; Widera, Artur; Meschede, Dieter

    2016-05-01

    We report on image processing techniques and experimental procedures to determine the lattice-site positions of single atoms in an optical lattice with high reliability, even for limited acquisition time or optical resolution. Determining the positions of atoms beyond the diffraction limit relies on parametric deconvolution in close analogy to methods employed in super-resolution microscopy. We develop a deconvolution method that makes effective use of the prior knowledge of the optical transfer function, noise properties, and discreteness of the optical lattice. We show that accurate knowledge of the image formation process enables a dramatic improvement on the localization reliability. This allows us to demonstrate super-resolution of the atoms’ position in closely packed ensembles where the separation between particles cannot be directly optically resolved. Furthermore, we demonstrate experimental methods to precisely reconstruct the point spread function with sub-pixel resolution from fluorescence images of single atoms, and we give a mathematical foundation thereof. We also discuss discretized image sampling in pixel detectors and provide a quantitative model of noise sources in electron multiplying CCD cameras. The techniques developed here are not only beneficial to neutral atom experiments, but could also be employed to improve the localization precision of trapped ions for ultra precise force sensing.

  7. Accuracy and Computational Efficiency in 3D Dispersion via Lattice-Boltzmann:. Models for Dispersion in Rough Fractures and Double-Diffusive Fingering

    NASA Astrophysics Data System (ADS)

    Stockman, Harlan W.; Glass, Robert J.; Cooper, Clay; Rajaram, Harihar

    In the presence of buoyancy, multiple diffusion coefficients, and porous media, the dispersion of solutes can be remarkably complex. The lattice-Boltzmann (LB) method is ideal for modeling dispersion in flow through complex geometries; yet, LB models of solute fingers or slugs can suffer from peculiar numerical conditions (e.g., denormal generation) that degrade computational performance by factors of 6 or more. Simple code optimizations recover performance and yield simulation rates up to ~3 million site updates per second on inexpensive, single-CPU systems. Two examples illustrate limits of the methods: (1) Dispersion of solute in a thin duct is often approximated with dispersion between infinite parallel plates. However, Doshi, Daiya and Gill (DDG) showed that for a smooth-walled duct, this approximation is in error by a factor of ~8. But in the presence of wall roughness (found in all real fractures), the DDG phenomenon can be diminished. (2) Double-diffusive convection drives "salt-fingering", a process for mixing of fresh-cold and warm-salty waters in many coastal regions. Fingering experiments are typically performed in Hele-Shaw cells, and can be modeled with the 2D (pseudo-3D) LB method with velocity-proportional drag forces. However, the 2D models cannot capture Taylor-Aris dispersion from the cell walls. We compare 2D and true 3D fingering models against observations from laboratory experiments.

  8. Flattop beam illumination for 3D imaging ladar with simple optical devices in the wide distance range

    NASA Astrophysics Data System (ADS)

    Tsuji, Hidenobu; Nakano, Takayuki; Matsumoto, Yoshihiro; Kameyama, Shumpei

    2016-04-01

    We have developed an illumination optical system for 3D imaging ladar (laser detection and ranging) which forms flattop beam shape by transformation of the Gaussian beam in the wide distance range. The illumination is achieved by beam division and recombination using a prism and a negative powered lens. The optimum condition of the transformation by the optical system is derived. It is confirmed that the flattop distribution can be formed in the wide range of the propagation distance from 1 to 1000 m. The experimental result with the prototype is in good agreement with the calculation result.

  9. Mixtures of Strongly Interacting Bosons in Optical Lattices

    SciTech Connect

    Buonsante, P.; Penna, V.; Giampaolo, S. M.; Illuminati, F.; Vezzani, A.

    2008-06-20

    We investigate the properties of strongly interacting heteronuclear boson-boson mixtures loaded in realistic optical lattices, with particular emphasis on the physics of interfaces. In particular, we numerically reproduce the recent experimental observation that the addition of a small fraction of {sup 41}K induces a significant loss of coherence in {sup 87}Rb, providing a simple explanation. We then investigate the robustness against the inhomogeneity typical of realistic experimental realizations of the glassy quantum emulsions recently predicted to occur in strongly interacting boson-boson mixtures on ideal homogeneous lattices.

  10. Effective Dirac dynamics of ultracold atoms in bichromatic optical lattices

    SciTech Connect

    Witthaut, D.; Salger, T.; Kling, S.; Grossert, C.; Weitz, M.

    2011-09-15

    We study the dynamics of ultracold atoms in tailored bichromatic optical lattices. By tuning the lattice parameters, one can readily engineer the band structure and realize a Dirac point, i.e., a true crossing of two Bloch bands. The dynamics in the vicinity of such a crossing is described by the one-dimensional Dirac equation, which is rigorously shown beyond the tight-binding approximation. Within this framework we analyze the effects of an external potential and demonstrate numerically that it is possible to demonstrate Klein tunneling with current experimental setups.

  11. Prospects for Optical Clocks with a Blue-Detuned Lattice

    SciTech Connect

    Takamoto, M.; Katori, H.; Marmo, S. I.; Ovsiannikov, V. D.; Pal'chikov, V. G.

    2009-02-13

    We investigated the properties of optical lattice clocks operated with a repulsive light-shift potential. The magic wavelength, where light-shift perturbation for the clock transition cancels, was experimentally determined to be 389.889(9) nm for {sup 87}Sr. The hyperpolarizability effects on the clock transition were investigated theoretically. With minimal trapping field perturbation provided by the blue-detuned lattice, the fractional uncertainty due to the hyperpolarizability effects was found to be 2x10{sup -19} in the relevant clock transition.

  12. Optical-lattice Hamiltonians for relativistic quantum electrodynamics

    SciTech Connect

    Kapit, Eliot; Mueller, Erich

    2011-03-15

    We show how interpenetrating optical lattices containing Bose-Fermi mixtures can be constructed to emulate the thermodynamics of quantum electrodynamics (QED). We present models of neutral atoms on lattices in 1+1, 2+1, and 3+1 dimensions whose low-energy effective action reduces to that of photons coupled to Dirac fermions of the corresponding dimensionality. We give special attention to (2+1)-dimensional quantum electrodynamics (QED3) and discuss how two of its most interesting features, chiral symmetry breaking and Chern-Simons physics, could be observed experimentally.

  13. Mixtures of strongly interacting bosons in optical lattices.

    PubMed

    Buonsante, P; Giampaolo, S M; Illuminati, F; Penna, V; Vezzani, A

    2008-06-20

    We investigate the properties of strongly interacting heteronuclear boson-boson mixtures loaded in realistic optical lattices, with particular emphasis on the physics of interfaces. In particular, we numerically reproduce the recent experimental observation that the addition of a small fraction of 41K induces a significant loss of coherence in 87Rb, providing a simple explanation. We then investigate the robustness against the inhomogeneity typical of realistic experimental realizations of the glassy quantum emulsions recently predicted to occur in strongly interacting boson-boson mixtures on ideal homogeneous lattices. PMID:18643555

  14. Optical fibre sensing in metals by embedment in 3D printed metallic structures

    NASA Astrophysics Data System (ADS)

    Maier, R. R. J.; Havermann, D.; Schneller, O.; Mathew, J.; Polyzos, D.; MacPherson, W. N.; Hand, D. P.

    2014-05-01

    Additive manufacturing or 3D printing of structural components in metals has potential to revolutionise the manufacturing industry. Embedded sensing in such structures opens a route towards SMART metals, providing added functionality, intelligence and enhanced performance in many components. Such embedded sensors would be capable of operating at extremely high temperatures by utilizing regenerated fibre Bragg gratings and in-fibre Fabry-Perot cavities.

  15. Towards a noninvasive intracranial tumor irradiation using 3d optical imaging and multimodal data registration.

    PubMed

    Posada, R; Daul, Ch; Wolf, D; Aletti, P

    2007-01-01

    Conformal radiotherapy (CRT) results in high-precision tumor volume irradiation. In fractioned radiotherapy (FRT), lesions are irradiated in several sessions so that healthy neighbouring tissues are better preserved than when treatment is carried out in one fraction. In the case of intracranial tumors, classical methods of patient positioning in the irradiation machine coordinate system are invasive and only allow for CRT in one irradiation session. This contribution presents a noninvasive positioning method representing a first step towards the combination of CRT and FRT. The 3D data used for the positioning is point clouds spread over the patient's head (CT-data usually acquired during treatment) and points distributed over the patient's face which are acquired with a structured light sensor fixed in the therapy room. The geometrical transformation linking the coordinate systems of the diagnosis device (CT-modality) and the 3D sensor of the therapy room (visible light modality) is obtained by registering the surfaces represented by the two 3D point sets. The geometrical relationship between the coordinate systems of the 3D sensor and the irradiation machine is given by a calibration of the sensor position in the therapy room. The global transformation, computed with the two previous transformations, is sufficient to predict the tumor position in the irradiation machine coordinate system with only the corresponding position in the CT-coordinate system. Results obtained for a phantom show that the mean positioning error of tumors on the treatment machine isocentre is 0.4 mm. Tests performed with human data proved that the registration algorithm is accurate (0.1 mm mean distance between homologous points) and robust even for facial expression changes.

  16. Pre-Processing of Point-Data from Contact and Optical 3D Digitization Sensors

    PubMed Central

    Budak, Igor; Vukelić, Djordje; Bračun, Drago; Hodolič, Janko; Soković, Mirko

    2012-01-01

    Contemporary 3D digitization systems employed by reverse engineering (RE) feature ever-growing scanning speeds with the ability to generate large quantity of points in a unit of time. Although advantageous for the quality and efficiency of RE modelling, the huge number of point datas can turn into a serious practical problem, later on, when the CAD model is generated. In addition, 3D digitization processes are very often plagued by measuring errors, which can be attributed to the very nature of measuring systems, various characteristics of the digitized objects and subjective errors by the operator, which also contribute to problems in the CAD model generation process. This paper presents an integral system for the pre-processing of point data, i.e., filtering, smoothing and reduction, based on a cross-sectional RE approach. In the course of the proposed system development, major emphasis was placed on the module for point data reduction, which was designed according to a novel approach with integrated deviation analysis and fuzzy logic reasoning. The developed system was verified through its application on three case studies, on point data from objects of versatile geometries obtained by contact and laser 3D digitization systems. The obtained results demonstrate the effectiveness of the system. PMID:22368513

  17. Writing of 3D optical integrated circuits with ultrashort laser pulses in the presence of strong spherical aberration

    NASA Astrophysics Data System (ADS)

    Bukharin, M. A.; Skryabin, N. N.; Khudyakov, D. V.; Vartapetov, S. K.

    2016-09-01

    A novel technique was proposed for 3D femtosecond writing of waveguides and optical integrated circuits in the presence of strong spherical aberration, caused by inscription at significantly different depth under the surface of optical glasses and crystals. Strong negative effect of spherical aberration and related asymmetry of created structures was reduced due to transition to the cumulative thermal regime of femtosecond interaction with the material. The differences in the influence of spherical aberration effect in a broad depth range (larger than 200 µm) was compensated by dynamic adjustment of laser pulse energy during the process of waveguides recording. The presented approach has been experimentally implemented in fused silica. Obtained results can be used in production of a broad class of femtosecond written three-dimensional integrated optical systems, inscripted at non-optimal (for focusing lens) optical depth or in significantly extended range of depths.

  18. New method for detection of complex 3D fracture motion - Verification of an optical motion analysis system for biomechanical studies

    PubMed Central

    2012-01-01

    Background Fracture-healing depends on interfragmentary motion. For improved osteosynthesis and fracture-healing, the micromotion between fracture fragments is undergoing intensive research. The detection of 3D micromotions at the fracture gap still presents a challenge for conventional tactile measurement systems. Optical measurement systems may be easier to use than conventional systems, but, as yet, cannot guarantee accuracy. The purpose of this study was to validate the optical measurement system PONTOS 5M for use in biomechanical research, including measurement of micromotion. Methods A standardized transverse fracture model was created to detect interfragmentary motions under axial loadings of up to 200 N. Measurements were performed using the optical measurement system and compared with a conventional high-accuracy tactile system consisting of 3 standard digital dial indicators (1 μm resolution; 5 μm error limit). Results We found that the deviation in the mean average motion detection between the systems was at most 5.3 μm, indicating that detection of micromotion was possible with the optical measurement system. Furthermore, we could show two considerable advantages while using the optical measurement system. Only with the optical system interfragmentary motion could be analyzed directly at the fracture gap. Furthermore, the calibration of the optical system could be performed faster, safer and easier than that of the tactile system. Conclusion The PONTOS 5 M optical measurement system appears to be a favorable alternative to previously used tactile measurement systems for biomechanical applications. Easy handling, combined with a high accuracy for 3D detection of micromotions (≤ 5 μm), suggests the likelihood of high user acceptance. This study was performed in the context of the deployment of a new implant (dynamic locking screw; Synthes, Oberdorf, Switzerland). PMID:22405047

  19. Measuring spin correlations in optical lattices using superlattice potentials

    SciTech Connect

    Pedersen, K. G. L.; Andersen, B. M.; Soerensen, A. S.; Bruun, G. M.; Syljuaasen, O. F.

    2011-10-15

    We suggest two experimental methods for probing both short- and long-range spin correlations of atoms in optical lattices using superlattice potentials. The first method involves an adiabatic doubling of the periodicity of the underlying lattice to probe neighboring singlet (triplet) correlations for fermions (bosons) by the occupation of the resulting vibrational ground state. The second method utilizes a time-dependent superlattice potential to generate spin-dependent transport by any number of prescribed lattice sites, and probes correlations by the resulting number of doubly occupied sites. For experimentally relevant parameters, we demonstrate how both methods yield large signatures of antiferromagnetic correlations of strongly repulsive fermionic atoms in a single shot of the experiment. Lastly, we show how this method may also be applied to probe d-wave pairing, a possible ground-state candidate for the doped repulsive Hubbard model.

  20. Dynamical phase interferometry of cold atoms in optical lattices

    SciTech Connect

    London, Uri; Gat, Omri

    2011-12-15

    We study the propagation of cold-atom wave packets in an interferometer with a Mach-Zehnder topology based on the dynamical phase of Bloch oscillation in a weakly forced optical lattice with a narrow potential barrier that functions as a cold-atom wave-packet splitter. We calculate analytically the atomic wave function, and show that the expected number of atoms in the two outputs of the interferometer oscillates rapidly as a function of the angle between the potential barrier and the forcing direction with period proportional to the external potential difference across a lattice spacing divided by the lattice band energy scale. The interferometer can be used as a high-precision force probe whose principle of operation is different from current interferometers based on the overall position of Bloch oscillating wave packets.

  1. Correlation between Optic Nerve Parameters Obtained Using 3D Nonmydriatic Retinal Camera and Optical Coherence Tomography: Interobserver Agreement on the Disc Damage Likelihood Scale.

    PubMed

    Han, Jae Wook; Cho, Soon Young; Kang, Kui Dong

    2014-01-01

    Purpose. To compare stereometric parameters obtained by three-dimensional (3D) optic disc photography and optical coherence tomography (OCT) and assess interobserver agreement on the disc damage likelihood scale (DDLS). Methods. This retrospective study included 190 eyes from 190 patients classified as normal, glaucoma suspect, or glaucomatous. Residents at different levels of training completed the DDLS for each patient before and after attending a training module. 3D optic disc photography and OCT were performed on each eye, and correlations between the DDLS and various parameters obtained by each device were calculated. Results. We found moderate agreement (weighted kappa value, 0.59 ± 0.03) between DDLS scores obtained by 3D optic disc photography and the glaucoma specialist. The weighted kappa values for agreement and interobserver concordance increased among residents after the training module. Interobserver concordance was the poorest at DDLS stages 5 and 6. The DDLS scored by the glaucoma specialist had the highest predictability value (0.941). Conclusions. The DDLS obtained by 3D optic disc photography is a useful diagnostic tool for glaucoma. A supervised teaching program increased trainee interobserver agreement on the DDLS. DDLS stages 5 and 6 showed the poorest interobserver agreement, suggesting that caution is required when recording these stages.

  2. Correlation between Optic Nerve Parameters Obtained Using 3D Nonmydriatic Retinal Camera and Optical Coherence Tomography: Interobserver Agreement on the Disc Damage Likelihood Scale.

    PubMed

    Han, Jae Wook; Cho, Soon Young; Kang, Kui Dong

    2014-01-01

    Purpose. To compare stereometric parameters obtained by three-dimensional (3D) optic disc photography and optical coherence tomography (OCT) and assess interobserver agreement on the disc damage likelihood scale (DDLS). Methods. This retrospective study included 190 eyes from 190 patients classified as normal, glaucoma suspect, or glaucomatous. Residents at different levels of training completed the DDLS for each patient before and after attending a training module. 3D optic disc photography and OCT were performed on each eye, and correlations between the DDLS and various parameters obtained by each device were calculated. Results. We found moderate agreement (weighted kappa value, 0.59 ± 0.03) between DDLS scores obtained by 3D optic disc photography and the glaucoma specialist. The weighted kappa values for agreement and interobserver concordance increased among residents after the training module. Interobserver concordance was the poorest at DDLS stages 5 and 6. The DDLS scored by the glaucoma specialist had the highest predictability value (0.941). Conclusions. The DDLS obtained by 3D optic disc photography is a useful diagnostic tool for glaucoma. A supervised teaching program increased trainee interobserver agreement on the DDLS. DDLS stages 5 and 6 showed the poorest interobserver agreement, suggesting that caution is required when recording these stages. PMID:24804081

  3. The 3D manipulation of a microsphere for nano-CMM probe using single fiber optical trapping

    NASA Astrophysics Data System (ADS)

    Eom, Sang In; Takaya, Yasuhiro; Miyoshi, Takashi; Hayashi, Terutake

    2006-08-01

    We suggest a novel 3-D probing technique for measuring micro parts which have high aspect ratio such as a groove or a deep-hole. This technique uses the optical force exerted on a dielectric microsphere at the tip of optical fiber so called the fiber optical trapping. A microsphere is trapped at the tip of an optical fiber which has micrometer size of the diameter and sub micrometer size of the tapered tip. The optical source is a Nd:YAG laser with the wavelength of 1064 nm. A fiber optical trapping system is quite similar to a conventional CMM. The roll of a microsphere is the same as the probe sphere of a conventional CMM and an optical fiber works as a stylus shaft. The micro optical fiber part is thinner than the diameter of the microsphere and longer than the depth of shapes such as deep holes and grooves, which enable to make an approach to a steep angle surface of a work piece with high aspect ratio.

  4. WebTOP: A 3D Interactive System for Teaching and Learning Optics

    ERIC Educational Resources Information Center

    Mzoughi, Taha; Herring, S. Davis; Foley, John T.; Morris, Matthew J.; Gilbert, Peter J.

    2007-01-01

    WebTOP is a three-dimensional, Web-based, interactive computer graphics system that helps instructors teach and students learn about waves and optics. Current subject areas include waves, geometrical optics, reflection and refraction, polarization, interference, diffraction, lasers, and scattering. Some of the topics covered are suited for…

  5. 3D monitoring and quality control using intraoral optical camera systems.

    PubMed

    Mehl, A; Koch, R; Zaruba, M; Ender, A

    2013-01-01

    The quality of intraoral scanning systems is steadily improving, and they are becoming easier and more reliable to operate. This opens up possibilities for routine clinical applications. A special aspect is that overlaying (superimposing) situations recorded at different times facilitates an accurate three-dimensional difference analysis. Such difference analyses can also be used to advantage in other areas of dentistry where target/actual comparisons are required. This article presents potential indications using a newly developed software, explaining the functionality of the evaluation process and the prerequisites and limitations of 3D monitoring.

  6. Wannier functions using a discrete variable representation for optical lattices

    NASA Astrophysics Data System (ADS)

    Paul, Saurabh; Tiesinga, Eite

    2016-09-01

    We propose a numerical method using the discrete variable representation (DVR) for constructing real-valued Wannier functions localized in a unit cell for both symmetric and asymmetric periodic potentials. We apply these results to finding Wannier functions for ultracold atoms trapped in laser-generated optical lattices. Following S. Kivelson [Phys. Rev. B 26, 4269 (1982), 10.1103/PhysRevB.26.4269], for a symmetric lattice with inversion symmetry, we construct Wannier functions as eigenstates of the position operators x ̂, y ̂, and z ̂ restricted to single-particle Bloch functions belonging to one or more bands. To ensure that the Wannier functions are real-valued, we numerically obtain the band structure and real-valued eigenstates using a uniform Fourier grid DVR. We then show, by a comparison of tunneling energies, that the Wannier functions are accurate for both inversion-symmetric and asymmetric potentials to better than 10 significant digits when using double-precision arithmetic. The calculations are performed for an optical lattice with double-wells per unit cell with tunable asymmetry along the x axis and a single sinusoidal potential along the perpendicular directions. Localized functions at the two potential minima within each unit cell are similarly constructed, but using a superposition of single-particle solutions from the two lowest bands. We finally use these localized basis functions to determine the two-body interaction energies in the Bose-Hubbard model and show the dependence of these energies on lattice asymmetry.

  7. Ytterbium optical lattice clock with 10-18 level characterization

    NASA Astrophysics Data System (ADS)

    Phillips, Nathaniel; Sherman, Jeff; Beloy, Kyle; Hinkley, Nathan; Schioppo, Marco; Oates, Chris; Ludlow, Andrew

    2014-05-01

    A recent comparison of two ytterbium-based optical lattice clocks at NIST demonstrated record stability of 1 . 6 parts in 1018 after 25,000s averaging. We report on measurements of the two primary systematic effects that shift the ultra-narrow clock transition, towards a reduction of the clock uncertainty to the 10-18 level. Uncertainty stemming from the blackbody radiation (BBR) shift is largely due to imprecise knowledge of the thermal environment surrounding the atoms. We detail the construction and operation of an in-vacuum, thermally-regulated radiation shield, which permits laser cooling and trapping while enabling an absolute temperature measurement with < 20 mK precision. Additionally, while operation of the optical lattice at the magic wavelength (λm) cancels the scalar Stark shift (since both clock states shift equally), higher-order vector and two-photon hyperpolarizability shifts remain. To evaluate these effects, as well as the polarizability away from λm, we implement a lattice buildup cavity around the atoms. The resulting twenty-fold enhancement of the lattice intensity provides a significant lever arm for precise measurement of these effects.

  8. Segmentation of whole cells and cell nuclei from 3-D optical microscope images using dynamic programming.

    PubMed

    McCullough, D P; Gudla, P R; Harris, B S; Collins, J A; Meaburn, K J; Nakaya, M A; Yamaguchi, T P; Misteli, T; Lockett, S J

    2008-05-01

    Communications between cells in large part drive tissue development and function, as well as disease-related processes such as tumorigenesis. Understanding the mechanistic bases of these processes necessitates quantifying specific molecules in adjacent cells or cell nuclei of intact tissue. However, a major restriction on such analyses is the lack of an efficient method that correctly segments each object (cell or nucleus) from 3-D images of an intact tissue specimen. We report a highly reliable and accurate semi-automatic algorithmic method for segmenting fluorescence-labeled cells or nuclei from 3-D tissue images. Segmentation begins with semi-automatic, 2-D object delineation in a user-selected plane, using dynamic programming (DP) to locate the border with an accumulated intensity per unit length greater that any other possible border around the same object. Then the two surfaces of the object in planes above and below the selected plane are found using an algorithm that combines DP and combinatorial searching. Following segmentation, any perceived errors can be interactively corrected. Segmentation accuracy is not significantly affected by intermittent labeling of object surfaces, diffuse surfaces, or spurious signals away from surfaces. The unique strength of the segmentation method was demonstrated on a variety of biological tissue samples where all cells, including irregularly shaped cells, were accurately segmented based on visual inspection.

  9. Fermions in Optical Lattices: Cooling Protocol to Observe Anti-ferromagnetism

    NASA Astrophysics Data System (ADS)

    Trivedi, Nandini

    2011-03-01

    Experiments on ultracold atoms in optical lattices have the potential of probing the complex phase diagrams arising from simple Hamiltonians. One of the most challenging problems for an optical lattice emulator is that of cooling fermions to observe interesting broken symmetry phases. In this talk I will discuss recent theoretical progress on this question for the simplest model of interacting fermions: the Hubbard model. We determine the equation of state, the density ρ (μ , T , U / t) , and the entropy of the 3D repulsive Hubbard model using exact determinental Quantum Monte Carlo (QMC) simulations. Using the local density approximation (LDA), we calculate the spatial variation of density, entropy density, double-occupancy, local compressibility and local spin correlations for different trap curvatures and interaction strengths U / t . In contrast to a homogeneous system, we show that in a trap we can locally squeeze out the entropy from certain regions and observe antiferromagnetic order, even though the total entropy per particle in the cloud is quite high. We show that significant cooling due to entropy redistribution in the trap can be achieved by two mechanisms: (a) by increasing the lattice depth, and (b) by decompressing the cloud. Our calculations can be an important guide in the race to observe antiferromagnetic order in optical lattices. In collaboration with: Thereza Paiva (Rio de Janeiro, Brazil), Mohit Randeria (Ohio State), and Richard Scalettar (UC Davis). We acknowledge support from ARO W911NF-08-1-0338 and NSF-DMR 0706203 and the use of computational facilities at the Ohio Sup.

  10. 3D optical two-mirror scanner with focus-tunable lens.

    PubMed

    Pokorny, Petr; Miks, Antonin

    2015-08-01

    The paper presents formulas for a ray tracing in the optical system of two-mirror optical scanner with a focus-tunable lens. Furthermore, equations for the calculation of focal length which ensure focusing of a beam in the desired point in a detection plane are derived. The uncertainty description of such focal length follows as well. The chosen vector approach is general; therefore, the application of formulas in various configurations of the optical systems is possible. In the example situation, the authors derived formulas for mirrors' rotations and the focal length depending on the position of the point in the detection plane. PMID:26368115

  11. Superfluid and Insulating Phases of Fermion Mixtures in Optical Lattices

    NASA Astrophysics Data System (ADS)

    Iskin, M.; de Melo, C. A. R. Sá

    2007-08-01

    The ground state phase diagram of fermion mixtures in optical lattices is analyzed as a function of interaction strength, fermion filling factor, and tunneling parameters. In addition to standard superfluid, phase-separated or coexisting superfluid excess-fermion phases found in homogeneous or harmonically trapped systems, fermions in optical lattices have several insulating phases, including a molecular Bose-Mott insulator (BMI), a Fermi-Pauli (band) insulator (FPI), a phase-separated BMI-FPI mixture or a Bose-Fermi checkerboard (BFC). The molecular BMI phase is the fermion mixture counterpart of the atomic BMI found in atomic Bose systems, the BFC or BMI-FPI phases exist in Bose-Fermi mixtures, and lastly the FPI phase is particular to the Fermi nature of the constituent atoms of the mixture.

  12. Towards exciting a Rydberg gas in optical lattices.

    NASA Astrophysics Data System (ADS)

    Manjappa, Manukumara; Han, Jingshan; Guo, Ruixiang; Vogt, Thibault; Li, Wenhui; Quantum Matter Group Team

    2013-05-01

    Rydberg atoms are highly excited atoms with principal quantum number n >10. They have exaggerated properties such as large dipole moment and high polarizability. Large dipole-dipole interactions between Rydberg atoms, which lead to Rydberg blockade and giant non linearity, provide unique opportunities for studying quantum many-body physics. Rydberg excitation of ground state quantum gas in optical lattices has already shown the formation of spatially organized structures and Rydberg dressed systems are promising for entering the strongly correlated regime. Our current project is to study the collective excitation to Rydberg states from a quantum gas of ground state atoms in an optical lattice. In this poster we present the latest development in building up the experimental apparatus and our plans on spectroscopic measurements and spatially imaging of Rydberg excitations. Centre for Quantum Technologies, National University of Singapore.

  13. Neutron detection and characterization for non-proliferation applications using 3D computer optical memories [Use of 3D optical computer memory for radiation detectors/dosimeters. Final progress report

    SciTech Connect

    Gary W. Phillips

    2000-12-20

    We have investigated 3-dimensional optical random access memory (3D-ORAM) materials for detection and characterization of charged particles of neutrons by detecting tracks left by the recoil charged particles produced by the neutrons. We have characterized the response of these materials to protons, alpha particles and carbon-12 nuclei as a functions of dose and energy. We have observed individual tracks using scanning electron microscopy and atomic force microscopy. We are investigating the use of neural net analysis to characterize energetic neutron fields from their track structure in these materials.

  14. Feasibility study of a single-shot 3D electron bunch shape monitor with an electro-optic sampling technique

    NASA Astrophysics Data System (ADS)

    Okayasu, Yuichi; Tomizawa, Hiromitsu; Matsubara, Shinichi; Kumagai, Noritaka; Maekawa, Akira; Uesaka, Mitsuru; Ishikawa, Tetsuya

    2013-05-01

    We developed a three-dimensional electron bunch charge distribution (3D-BCD) monitor with single-shot detection, and a spectral decoding based electro-optic (EO) sampling technique for a nondestructive monitor enables real-time reconstruction of the three-dimensional distribution of a bunch charge. We realized three goals by simultaneously probing a number of Pockels EO crystals that surround the electron beam axis with hollow and radial polarized laser pulses. First, we performed a feasibility test as a simple case of a 3D-BCD monitor probing two ZnTe crystals as EO detectors installed on the opposite angle to the electron beam axis and confirmed that we simultaneously obtained both EO signals. Since the adopted hollow probe laser pulse is not only radially polarized but also temporally shifted azimuthally, some disorders in the radial polarization distribution of such a laser pulse were numerically analyzed with a plane-wave expansion method. Based on the above investigations, the 3D-BCD monitor is feasible both in experimental and numerical estimations. Furthermore, we previously developed a femtosecond response organic crystal as a Pockels EO detector and a broadband probe laser (≥350nm in FWHM); the 3D-BCD monitor realizes 30- to 40-fs (FWHM) temporal resolution. Eventually, the monitor is expected to be equipped in such advanced accelerators as XFEL to measure and adjust the electron bunch charge distribution in real time. The 3D-BCD measurement works as a critical tool to provide feedback to seeded FELs.

  15. Operational Retrieval of aerosol optical depth over Indian subcontinent and Indian Ocean using INSAT-3D/Imager product validation

    NASA Astrophysics Data System (ADS)

    Mishra, M. K.; Rastogi, G.; Chauhan, P.

    2014-11-01

    Aerosol optical depth (AOD) over Indian subcontinent and Indian Ocean region is derived operationally for the first time from the geostationary earth orbit (GEO) satellite INSAT-3D Imager data at 0.65 μm wavelength. Single visible channel algorithm based on clear sky composites gives larger retrieval error in AOD than other multiple channel algorithms due to errors in estimating surface reflectance and atmospheric property. However, since MIR channel signal is insensitive to the presence of most aerosols, therefore in present study, AOD retrieval algorithm employs both visible (centred at 0.65 μm) and mid-infrared (MIR) band (centred at 3.9 μm) measurements, and allows us to monitor transport of aerosols at higher temporal resolution. Comparisons made between INSAT-3D derived AOD (τI) and MODIS derived AOD (τM) co-located in space (at 1° resolution) and time during January, February and March (JFM) 2014 encompasses 1165, 1052 and 900 pixels, respectively. Good agreement found between τI and τM during JFM 2014 with linear correlation coefficients (R) of 0.87, 0.81 and 0.76, respectively. The extensive validation made during JFM 2014 encompasses 215 co-located AOD in space and time derived by INSAT 3D (τI) and 10 sun-photometers (τA) that includes 9 AERONET (Aerosol Robotic Network) and 1 handheld sun-photometer site. INSAT-3D derived AOD i.e. τI, is found within the retrieval errors of τI = ±0.07 ±0.15τA with linear correlation coefficient (R) of 0.90 and root mean square error equal (RMSE) to 0.06. Present work shows that INSAT-3D aerosol products can be used quantitatively in many applications with caution for possible residual clouds, snow/ice, and water contamination.

  16. Treating benign optic nerve tumors with a 3-D conformal plan

    SciTech Connect

    Millunchick, Cheryl Hope

    2013-07-01

    A 68 year old male patient presented for radiation therapy for treatment of a benign tumor, a glioma of his left optic nerve. The radiation oncologist intended to prescribe 52.2 Gy to the planning target volume, while maintaining a maximum of 54 Gy to the optic nerves and the optic chiasm and a maximum of 40–45 Gy to the globes in order to minimize the possibility of damaging the optic system, which is especially important as this is a benign tumor. The dosimetrist devised a conformal non-coplanar three-dimensional plan with a slightly weighted forward planning component. This plan was created in approximately 15 minutes after the critical organs and the targets were delineated and resulted in an extremely conformal and homogenous plan, treating the target while sparing the nearby critical structures. This approach can also be extended to other tumors in the brain - benign or malignant.

  17. Dynamic response of trapped ultracold bosons on optical lattices

    SciTech Connect

    Batrouni, G.G.; Assaad, F.F.; Scalettar, R.T.; Denteneer, P.J.H.

    2005-09-15

    We study the dynamic response of ultracold bosons trapped in one-dimensional optical lattices using Quantum Monte Carlo simulations of the boson Hubbard model with a confining potential. The dynamic structure factor reveals the inhomogeneous nature of the low temperature state, which contains coexisting Mott insulator and superfluid regions. We present new evidence for local quantum criticality and discuss implications for the experimental excitation spectrum of {sup 87}Rb atoms confined in one dimension.

  18. Self-similar solitary waves in Bessel optical lattices

    SciTech Connect

    Xu Siliu; Liang Jianchu; Yi Lin

    2010-01-15

    An analytical solitary wave solution to the generalized nonlinear Schroedinger equation (NLSE) with varying coefficients in Bessel optical lattices is obtained based on the self-similar method. Our results indicate that a new family of Bessel (BSL) self-similar spatial solitons can be formed in the Kerr nonlinear media in the confined cylindrical symmetric geometry in sizes. These soliton profiles are rather stable, independent of propagation distance.

  19. Hyperfine spectra of trapped bosons in optical lattices

    SciTech Connect

    Hazzard, Kaden R. A.; Mueller, Erich J.

    2007-12-15

    We calculate the interaction induced inhomogeneous broadening of spectral lines in a trapped Bose gas as a function of the depth of a three-dimensional cubic optical lattice. As observed in recent experiments, we find that the terraced 'wedding-cake' structure of Mott plateaus splits the spectrum into a series of discrete peaks. The spectra are extremely sensitive to density corrugations and trap anharmonicities. For example, even when the majority of the cloud is superfluid the spectrum displays discrete peaks.

  20. Tunneling Dynamics and Gauge Potentials in Optical Lattices

    NASA Astrophysics Data System (ADS)

    Dutta, S. K.; Teo, B. K.; Raithel, G.

    1999-09-01

    We study periodic well-to-well tunneling of 87Rb atoms on adiabatic potential surfaces of a 1D optical lattice. The observed dependence of the lowest-band tunneling period on the depth of the adiabatic potential can only be explained by an additional intensity-independent gauge potential predicted by Dum et al. The experimental data are in excellent agreement with our quantum Monte Carlo wave-function simulations and band structure calculations.

  1. Full-color holographic 3D imaging system using color optical scanning holography

    NASA Astrophysics Data System (ADS)

    Kim, Hayan; Kim, You Seok; Kim, Taegeun

    2016-06-01

    We propose a full-color holographic three-dimensional imaging system that composes a recording stage, a transmission and processing stage and reconstruction stage. In recording stage, color optical scanning holography (OSH) records the complex RGB holograms of an object. In transmission and processing stage, the recorded complex RGB holograms are transmitted to the reconstruction stage after conversion to off-axis RGB holograms. In reconstruction stage, the off-axis RGB holograms are reconstructed optically.

  2. Cost-effective method of manufacturing a 3D MEMS optical switch

    NASA Astrophysics Data System (ADS)

    Carr, Emily; Zhang, Ping; Keebaugh, Doug; Chau, Kelvin

    2009-02-01

    growth of data and video transport networks. All-optical switching eliminates the need for optical-electrical conversion offering the ability to switch optical signals transparently: independent of data rates, formats and wavelength. It also provides network operators much needed automation capabilities to create, monitor and protect optical light paths. To further accelerate the market penetration, it is necessary to identify a path to reduce the manufacturing cost significantly as well as enhance the overall system performance, uniformity and reliability. Currently, most MEMS optical switches are assembled through die level flip-chip bonding with either epoxies or solder bumps. This is due to the alignment accuracy requirements of the switch assembly, defect matching of individual die, and cost of the individual components. In this paper, a wafer level assembly approach is reported based on silicon fusion bonding which aims to reduce the packaging time, defect count and cost through volume production. This approach is successfully demonstrated by the integration of two 6-inch wafers: a mirror array wafer and a "snap-guard" wafer, which provides a mechanical structure on top of the micromirror to prevent electrostatic snap-down. The direct silicon-to-silicon bond eliminates the CTEmismatch and stress issues caused by non-silicon bonding agents. Results from a completed integrated switch assembly will be presented, which demonstrates the reliability and uniformity of some key parameters of this MEMS optical switch.

  3. LES prediction and analysis of the aero-optical environment around a 3-D turret

    NASA Astrophysics Data System (ADS)

    Mathews, Edwin; Wang, Kan; Wang, Meng; Jumper, Eric

    2015-11-01

    Using wall-modeled large-eddy simulation, a Mach 0.4 flow over a hemisphere-on-cylinder turret at the experimental Reynolds number of ReD = 2 . 3 ×106 is simulated to study the aero-optical distortions caused by turbulent density fluctuations. The optical distortions are calculated at over 250 viewing angles during the simulation to thoroughly investigate the optical environment around the turret. Flow field and optical results show good comparisons with experimental measurements. A large database of three-dimensional velocity and density fields is generated for study of the connection between global flow dynamics and local optical distortions. Proper orthogonal decomposition and dynamic mode decomposition are applied to both the distorted wavefronts and the flow-field database. A method of reconstructing the optical wavefronts from the density field modes is investigated. Relations between prominent flow features and wavefront components including tip/tilt and higher-order effects will be discussed. Supported by HEL-JTO through AFOSR Grant FA9550-13-1-0001.

  4. Dynamics of Hubbard-Band Quasiparticles in Disordered Optical Lattices

    NASA Astrophysics Data System (ADS)

    Scarola, Vito; Demarco, Brian

    Recent experiments use transport of degenerate Fermi gases in optical lattices (Kondov et al. Phys. Rev. Lett. 114, 083002 (2015) to probe the interplay of disorder and strong interactions. These experiments find evidence for an intriguing insulating phase where quantum diffusion is completely suppressed by strong disorder. Quantitative interpretation of these experiments remains an open problem that requires inclusion of non-zero entropy, strong interaction, and trapping in an Anderson-Hubbard model. We construct a theory of dynamics of Hubbard-band quasiparticles tailored to trapped optical lattice experiments. We compare the theory directly with center-of-mass transport experiments of Kondov et al. with no fitting parameters. The close agreement between theory and experiments shows that the suppression of transport is only partly due to finite entropy effects. We argue that the complete suppression of transport is consistent with short-time, finite size precursors of Anderson localization of Hubbard-band quasiparticles. The combination of our theoretical framework and optical lattice experiments offers an important platform for studying localization in isolated many-body quantum systems. V.W.S. acknowledges support from AFOSR under Grant FA9550-11-1-0313.

  5. Fast, high-resolution 3D dosimetry utilizing a novel optical-CT scanner incorporating tertiary telecentric collimation.

    PubMed

    Sakhalkar, H S; Oldham, M

    2008-01-01

    This study introduces a charge coupled device (CCD) area detector based optical-computed tomography (optical-CT) scanner for comprehensive verification of radiation dose distributions recorded in nonscattering radiochromic dosimeters. Defining characteristics include: (i) a very fast scanning time of approximately 5 min to acquire a complete three-dimensional (3D) dataset, (ii) improved image formation through the use of custom telecentric optics, which ensures accurate projection images and minimizes artifacts from scattered and stray-light sources, and (iii) high resolution (potentially 50 microm) isotropic 3D dose readout. The performance of the CCD scanner for 3D dose readout was evaluated by comparison with independent 3D readout from the single laser beam OCTOPUS-scanner for the same PRESAGE dosimeters. The OCTOPUS scanner was considered the "gold standard" technique in light of prior studies demonstrating its accuracy. Additional comparisons were made against calculated dose distributions from the ECLIPSE treatment-planning system. Dose readout for the following treatments were investigated: (i) a single rectangular beam irradiation to investigate small field and very steep dose gradient dosimetry away from edge effects, (ii) a 2-field open beam parallel-opposed irradiation to investigate dosimetry along steep dose gradients, and (iii) a 7-field intensity modulated radiation therapy (IMRT) irradiation to investigate dosimetry for complex treatment delivery involving modulation of fluence and for dosimetry along moderate dose gradients. Dose profiles, dose-difference plots, and gamma maps were employed to evaluate quantitative estimates of agreement between independently measured and calculated dose distributions. Results indicated that dose readout from the CCD scanner was in agreement with independent gold-standard readout from the OCTOPUS-scanner as well as the calculated ECLIPSE dose distribution for all treatments, except in regions within a few

  6. Fast, high-resolution 3D dosimetry utilizing a novel optical-CT scanner incorporating tertiary telecentric collimation

    SciTech Connect

    Sakhalkar, H. S.; Oldham, M.

    2008-01-15

    This study introduces a charge coupled device (CCD) area detector based optical-computed tomography (optical-CT) scanner for comprehensive verification of radiation dose distributions recorded in nonscattering radiochromic dosimeters. Defining characteristics include: (i) a very fast scanning time of {approx}5 min to acquire a complete three-dimensional (3D) dataset, (ii) improved image formation through the use of custom telecentric optics, which ensures accurate projection images and minimizes artifacts from scattered and stray-light sources, and (iii) high resolution (potentially 50 {mu}m) isotropic 3D dose readout. The performance of the CCD scanner for 3D dose readout was evaluated by comparison with independent 3D readout from the single laser beam OCTOPUS-scanner for the same PRESAGE dosimeters. The OCTOPUS scanner was considered the 'gold standard' technique in light of prior studies demonstrating its accuracy. Additional comparisons were made against calculated dose distributions from the ECLIPSE treatment-planning system. Dose readout for the following treatments were investigated: (i) a single rectangular beam irradiation to investigate small field and very steep dose gradient dosimetry away from edge effects, (ii) a 2-field open beam parallel-opposed irradiation to investigate dosimetry along steep dose gradients, and (iii) a 7-field intensity modulated radiation therapy (IMRT) irradiation to investigate dosimetry for complex treatment delivery involving modulation of fluence and for dosimetry along moderate dose gradients. Dose profiles, dose-difference plots, and gamma maps were employed to evaluate quantitative estimates of agreement between independently measured and calculated dose distributions. Results indicated that dose readout from the CCD scanner was in agreement with independent gold-standard readout from the OCTOPUS-scanner as well as the calculated ECLIPSE dose distribution for all treatments, except in regions within a few millimeters of

  7. Optical 3D Nano-fabrication: Drawing or Growing? (Conference Presentation)

    NASA Astrophysics Data System (ADS)

    Kawata, Satoshi

    2016-05-01

    Conventional nanotechnology based on the lithography and scanning probe microscopy is limited to 2D fabrication and modification. Here, I will talk about the method for 3D laser fabrication with two-photon polymerization [1], two-photon isomerization [2], and two-photon photo-reduction [3]. Self-growth technology, such as self-grown fiber structures of polymer [4] and self-grown metallic fractal metamaterials structures [5] will be also discussed. [1] S. Kawata, et. al, Nature 412, 697-698, 2001. [2] S. Kawata and Y. Kawata, Chem Rev. 88, 083110, 2006. [3] Y. -Y. Cao, et. al., Small 5, 1144-1148, 2009 [4] S. Shoji and S. Kawata, Appl. Phys. Lett. 75, 737-739, 1999. [5] N. Takeyasu, N. Nishimura, S. Kawata, submitted.

  8. QUASI-OPTICAL 3-dB HYBRID FOR FUTURE HIGH-ENERGY ACCELERATORS

    SciTech Connect

    Jay L. Hirshfield

    2005-12-15

    Phase-controlled wave combiners-commutators and isolators for protecting rf sources against reflection from the accelerating structure can be built using a 3-dB hybrid built around a metallic grating used in a ''magic-Y'' configuration. Models of the magic-Y were designed and tested, both at 34.272 GHz using the Omega-P Ka-band magnicon, and at 11.424 GHz using the Omega-P/NRL X-band magnicon. All elements of the magic-Y were optimized analytically and numerically. A non-vacuum 34 GHz model of the magic Y was built and tested experimentally at a low power. An engineering design for the high power (vacuum) compressor was configured. Similar steps were taken for the 11-GHz version.

  9. Study of negative hydrogen ion beam optics using the 3D3V PIC model

    SciTech Connect

    Miyamoto, K.; Nishioka, S.; Goto, I.; Hatayama, A.; Hanada, M.; Kojima, A.

    2015-04-08

    The mechanism of negative ion extraction under real conditions with the complex magnetic field is studied by using the 3D PIC simulation code. The extraction region of the negative ion source for the negative ion based neutral beam injection system in fusion reactors is modelled. It is shown that the E x B drift of electrons is caused by the magnetic filter and the electron suppression magnetic field, and the resultant asymmetry of the plasma meniscus. Furthermore, it is indicated that that the asymmetry of the plasma meniscus results in the asymmetry of negative ion beam profile including the beam halo. It could be demonstrated theoretically that the E x B drift is not significantly weakened by the elastic collisions of the electrons with neutral particles.

  10. Diffuse reflectance optical topography: location of inclusions in 3D and detectability limits

    PubMed Central

    Carbone, N. A.; Baez, G. R.; García, H. A.; Waks Serra, M. V.; Di Rocco, H. O.; Iriarte, D. I.; Pomarico, J. A.; Grosenick, D.; Macdonald, R.

    2014-01-01

    In the present contribution we investigate the images of CW diffusely reflected light for a point-like source, registered by a CCD camera imaging a turbid medium containing an absorbing lesion. We show that detection of μa variations (absorption anomalies) is achieved if images are normalized to background intensity. A theoretical analysis based on the diffusion approximation is presented to investigate the sensitivity and the limitations of our proposal and a novel procedure to find the location of the inclusions in 3D is given and tested. An analysis of the noise and its influence on the detection capabilities of our proposal is provided. Experimental results on phantoms are also given, supporting the proposed approach. PMID:24876999

  11. Comparison of different techniques in optical trap for generating picokelvin 3D atom cloud in microgravity

    NASA Astrophysics Data System (ADS)

    Yao, Hepeng; Luan, Tian; Li, Chen; Zhang, Yin; Ma, Zhaoyuan; Chen, Xuzong

    2016-01-01

    Pursuing ultralow temperature 3D atom gas under microgravity conditions is one of the popular topics in the field of ultracold research. Many groups around the world are using, or are planning to use, delta-kick cooling (DKC) in microgravity. Our group has also proposed a two-stage crossed beam cooling (TSCBC) method that also provides a path to picokelvin temperatures. In this paper, we compare the characteristics of TSCBC and DKC for producing a picokelvin system in microgravity. Using a direct simulation Monte Carlo (DSMC) method, we simulate the cooling process of 87Rb using the two different cooling techniques. Under the same initial conditions, 87Rb can reach 7 pK in 15 s using TSCBC and 75 pK in 5.1 s with DKC. The simulation results show that TSCBC can reach lower temperatures compared with DKC, but needs more time and a more stable laser.

  12. Application of optical 3D measurement on thin film buckling to estimate interfacial toughness

    NASA Astrophysics Data System (ADS)

    Jia, H. K.; Wang, S. B.; Li, L. A.; Wang, Z. Y.; Goudeau, P.

    2014-03-01

    The shape-from-focus (SFF) method has been widely studied as a passive depth recovery and 3D reconstruction method for digital images. An important step in SFF is the calculation of the focus level for different points in an image by using a focus measure. In this work, an image entropy-based focus measure is introduced into the SFF method to measure the 3D buckling morphology of an aluminum film on a polymethylmethacrylate (PMMA) substrate at a micro scale. Spontaneous film wrinkles and telephone-cord wrinkles are investigated after the deposition of a 300 nm thick aluminum film onto the PMMA substrate. Spontaneous buckling is driven by the highly compressive stress generated in the Al film during the deposition process. The interfacial toughness between metal films and substrates is an important parameter for the reliability of the film/substrate system. The height profiles of different sections across the telephone-cord wrinkle can be considered a straight-sided model with uniform width and height or a pinned circular model that has a delamination region characterized by a sequence of connected sectors. Furthermore, the telephone-cord geometry of the thin film can be used to calculate interfacial toughness. The instability of the finite element model is introduced to fit the buckling morphology obtained by SFF. The interfacial toughness is determined to be 0.203 J/m2 at a 70.4° phase angle from the straight-sided model and 0.105 J/m2 at 76.9° from the pinned circular model.

  13. Spatially monitoring oxygen level in 3D microfabricated cell culture systems using optical oxygen sensing beads.

    PubMed

    Wang, Lin; Acosta, Miguel A; Leach, Jennie B; Carrier, Rebecca L

    2013-04-21

    Capability of measuring and monitoring local oxygen concentration at the single cell level (tens of microns scale) is often desirable but difficult to achieve in cell culture. In this study, biocompatible oxygen sensing beads were prepared and tested for their potential for real-time monitoring and mapping of local oxygen concentration in 3D micro-patterned cell culture systems. Each oxygen sensing bead is composed of a silica core loaded with both an oxygen sensitive Ru(Ph2phen3)Cl2 dye and oxygen insensitive Nile blue reference dye, and a poly-dimethylsiloxane (PDMS) shell rendering biocompatibility. Human intestinal epithelial Caco-2 cells were cultivated on a series of PDMS and type I collagen based substrates patterned with micro-well arrays for 3 or 7 days, and then brought into contact with oxygen sensing beads. Using an image analysis algorithm to convert florescence intensity of beads to partial oxygen pressure in the culture system, tens of microns-size oxygen sensing beads enabled the spatial measurement of local oxygen concentration in the microfabricated system. Results generally indicated lower oxygen level inside wells than on top of wells, and local oxygen level dependence on structural features of cell culture surfaces. Interestingly, chemical composition of cell culture substrates also appeared to affect oxygen level, with type-I collagen based cell culture systems having lower oxygen concentration compared to PDMS based cell culture systems. In general, results suggest that oxygen sensing beads can be utilized to achieve real-time and local monitoring of micro-environment oxygen level in 3D microfabricated cell culture systems.

  14. Focus Variation - A New Technology for High Resolution Optical 3D Surface Metrology in the Micro- and Nanometer Range

    NASA Astrophysics Data System (ADS)

    Huber, O.

    2009-04-01

    Focus Variation - A New Technology for High Resolution Optical 3D Surface Metrology in the Micro- and Nanometer Range S. Scherer1, E. Cristea1, O. Huber1, A. Krenn1 1 ALICONA GmbH Graz, Austria The need for increasing accuracy is a characteristic of all geo-applications, and hence of the instruments contributing to obtaining relevant data. Small and fine sensors are being developed, measuring different parameters of our geosystem and requiring continuous validation and calibration. These sensors have often very small components (fine sensors able to sense dust, atmospheric water vapour characteristics, pressure change, gravimeters, satellite micro-components), showing complex topographies including steep flanks and having varying reflective properties. In order to get valid and reliable results, quality assurance of these instruments and sensors is required. The optical technology Focus-Variation, developed by Alicona and added in the latest draft of the upcoming ISO standard 25178, provides high resolution 3D surface metrology even at those complex topographies. The technique of Focus-Variation combines the small depth of focus of an optical system with vertical scanning to provide topographical and color information from the variation of focus. It is used for high-resolution optical 3D surface measurements. The traceable and repeatable measurement results are further being used for e.g. calibration and validation purposes. Some of the characteristics of the technology are: - Measurement of instruments / samples with steep flanks up to 80° - Measurement of materials with strongly varying reflection properties - Measurement of surfaces presenting fine (from 10nm) or strong roughness Here, we present the operating principle and possible applications of the optical 3D measurement system "InfiniteFocus", which is based on the technology of Focus-Variation. With the vertical resolution of up to 10nm, InfiniteFocus yields meaningful form and roughness measurements. The

  15. Optically clearing tissue as an initial step for 3D imaging of core biopsies to diagnose pancreatic cancer

    NASA Astrophysics Data System (ADS)

    Das, Ronnie; Agrawal, Aishwarya; Upton, Melissa P.; Seibel, Eric J.

    2014-02-01

    The pancreas is a deeply seated organ requiring endoscopically, or radiologically guided biopsies for tissue diagnosis. Current approaches include either fine needle aspiration biopsy (FNA) for cytologic evaluation, or core needle biopsies (CBs), which comprise of tissue cores (L = 1-2 cm, D = 0.4-2.0 mm) for examination by brightfield microscopy. Between procurement and visualization, biospecimens must be processed, sectioned and mounted on glass slides for 2D visualization. Optical information about the native tissue state can be lost with each procedural step and a pathologist cannot appreciate 3D organization from 2D observations of tissue sections 1-8 μm in thickness. Therefore, how might histological disease assessment improve if entire, intact CBs could be imaged in both brightfield and 3D? CBs are mechanically delicate; therefore, a simple device was made to cut intact, simulated CBs (L = 1-2 cm, D = 0.2-0.8 mm) from porcine pancreas. After CBs were laid flat in a chamber, z-stack images at 20x and 40x were acquired through the sample with and without the application of an optical clearing agent (FocusClear®). Intensity of transmitted light increased by 5-15x and islet structures unique to pancreas were clearly visualized 250-300 μm beneath the tissue surface. CBs were then placed in index matching square capillary tubes filled with FocusClear® and a standard optical clearing agent. Brightfield z-stack images were then acquired to present 3D visualization of the CB to the pathologist.

  16. Fast spatial beam shaping by acousto-optic diffraction for 3D non-linear microscopy.

    PubMed

    Akemann, Walther; Léger, Jean-François; Ventalon, Cathie; Mathieu, Benjamin; Dieudonné, Stéphane; Bourdieu, Laurent

    2015-11-01

    Acousto-optic deflection (AOD) devices offer unprecedented fast control of the entire spatial structure of light beams, most notably their phase. AOD light modulation of ultra-short laser pulses, however, is not straightforward to implement because of intrinsic chromatic dispersion and non-stationarity of acousto-optic diffraction. While schemes exist to compensate chromatic dispersion, non-stationarity remains an obstacle. In this work we demonstrate an efficient AOD light modulator for stable phase modulation using time-locked generation of frequency-modulated acoustic waves at the full repetition rate of a high power laser pulse amplifier of 80 kHz. We establish the non-local relationship between the optical phase and the generating acoustic frequency function and verify the system for temporal stability, phase accuracy and generation of non-linear two-dimensional phase functions. PMID:26561090

  17. Fast spatial beam shaping by acousto-optic diffraction for 3D non-linear microscopy.

    PubMed

    Akemann, Walther; Léger, Jean-François; Ventalon, Cathie; Mathieu, Benjamin; Dieudonné, Stéphane; Bourdieu, Laurent

    2015-11-01

    Acousto-optic deflection (AOD) devices offer unprecedented fast control of the entire spatial structure of light beams, most notably their phase. AOD light modulation of ultra-short laser pulses, however, is not straightforward to implement because of intrinsic chromatic dispersion and non-stationarity of acousto-optic diffraction. While schemes exist to compensate chromatic dispersion, non-stationarity remains an obstacle. In this work we demonstrate an efficient AOD light modulator for stable phase modulation using time-locked generation of frequency-modulated acoustic waves at the full repetition rate of a high power laser pulse amplifier of 80 kHz. We establish the non-local relationship between the optical phase and the generating acoustic frequency function and verify the system for temporal stability, phase accuracy and generation of non-linear two-dimensional phase functions.

  18. Differential axial contrast of optical sections: laser microtomography and quantitative 3D reconstruction

    NASA Astrophysics Data System (ADS)

    Pogorelova, M. A.; Golichenkov, V. A.; Pogorelov, A. G.

    2014-03-01

    Specific features of the quantitative laser microtomography of biological samples are discussed. The method exhibits the main advantages of a confocal microscope (rapid measurement of a stack of parallel optical cross sections and accurate displacement of an object along the optical axis). A relatively high contrast is reached owing to the superposition of pairwise complementary images on neighboring cross sections. A simple and convenient algorithm for image processing does not require additional software and can be computerized using a conventional graphic editor. The applicability of the method is illustrated using volume measurements of a single cell of an early mouse embryo.

  19. New light-trapping concept by means of several optical components applied to compact holographic 3D concentration solar module

    NASA Astrophysics Data System (ADS)

    Villamarín Villegas, Ayalid M.; Pérez López, Francisco J.; Calo López, Antonio; Rodríguez San Segundo, Hugo-José

    2014-05-01

    A new light-trapping concept is presented, which joins broad bandwidth volume phase reflection holograms (VPRH) working together with three other optical components: specifically designed three-dimensional (3D) cavities, Total Internal Reflection (TIR) within an optical medium, and specular reflection by means of a highly reflective surface. This concept is applied to the design and development of both low concentration photovoltaic (LCPV) and solar thermal modules reaching a concentration factor of up to 3X. Higher concentrations are feasible for use in concentrated solar power (CSP) devices. The whole system is entirely made of polymeric materials (except for the solar cells or fluid carrying pipes), thus reducing cost by up to 40%. The module concentrates solar light onto solar cells - or fluid carrying pipes - with no need for active tracking of the sun, covering the whole seasonal and daily incident angle spectrum while it also minimizes optical losses. In this work we analyze the first experimentally measured optical characteristics and performance of VPRH in dichromated gelatin film (DCG) in our concept. The VPRH can reach high diffraction efficiencies (˜98%, ignoring Fresnel reflection losses). Thanks to specifically designed raw material, coating and developing process specifications, also very broad selective spectral (higher than 300 nm) and angular bandwidths (˜+20º) per grating are achieved. The VPRH was optimized to use silicon solar cells, but designs for other semiconductor devices or for fluid heating are feasible. The 3D shape, the hologram's and reflective surface's optical quality, the TIR effect and the correct coupling of all the components are key to high performance of the concentration solar module.

  20. Modular optical topometric sensor for 3D acquisition of human body surfaces and long-term monitoring of variations.

    PubMed

    Bischoff, Guido; Böröcz, Zoltan; Proll, Christian; Kleinheinz, Johannes; von Bally, Gert; Dirksen, Dieter

    2007-08-01

    Optical topometric 3D sensors such as laser scanners and fringe projection systems allow detailed digital acquisition of human body surfaces. For many medical applications, however, not only the current shape is important, but also its changes, e.g., in the course of surgical treatment. In such cases, time delays of several months between subsequent measurements frequently occur. A modular 3D coordinate measuring system based on the fringe projection technique is presented that allows 3D coordinate acquisition including calibrated color information, as well as the detection and visualization of deviations between subsequent measurements. In addition, parameters describing the symmetry of body structures are determined. The quantitative results of the analysis may be used as a basis for objective documentation of surgical therapy. The system is designed in a modular way, and thus, depending on the object of investigation, two or three cameras with different capabilities in terms of resolution and color reproduction can be utilized to optimize the set-up.

  1. Artificial Staggered Magnetic Field for Ultracold Atoms in Optical Lattices

    NASA Astrophysics Data System (ADS)

    Morais Smith, Cristiane

    2011-03-01

    Uniform magnetic fields are ubiquitous in nature, but this is not the case for staggered magnetic fields. In this talk, I will discuss an experimental set-up for cold atoms recently proposed by us, which allows for the realization of a ``staggered gauge field'' in a 2D square optical lattice. If the lattice is loaded with bosons, it may be described by an effective Bose-Hubbard Hamiltonian, with complex and anisotropic hopping coefficients. A very rich phase diagram emerges: besides the usual Mott-insulator and zero-momentum condensate, a new phase with a finite momentum condensate becomes the ground-state at strong gauge fields. By using the technique of Feshbach resonance, the dynamics of a coherent superposition of a vortex-carrying atomic condensate and a conventional zero-momentum molecular condensate can also be studied within the same scheme. On the other hand, if the lattice is loaded with fermions, a highly tunable, graphene-like band structure can be realized, without requiring the honeycomb lattice symmetry. When the system is loaded with a mixture of bosons and two-species fermions, several features of the high-Tc phase diagram can be reproduced. A dome-shaped unconventional superconducting region arises, surrounded by a non-Fermi liquid and a Fermi liquid at low and high doping, respectively. We acknowledge financial support from the Netherlands Organization for Scientific Research (NWO).

  2. Optical to microwave clock frequency ratios with a nearly continuous strontium optical lattice clock

    NASA Astrophysics Data System (ADS)

    Lodewyck, Jérôme; Bilicki, Sławomir; Bookjans, Eva; Robyr, Jean-Luc; Shi, Chunyan; Vallet, Grégoire; Le Targat, Rodolphe; Nicolodi, Daniele; Le Coq, Yann; Guéna, Jocelyne; Abgrall, Michel; Rosenbusch, Peter; Bize, Sébastien

    2016-08-01

    Optical lattice clocks are at the forefront of frequency metrology. Both the instability and systematic uncertainty of these clocks have been reported to be two orders of magnitude smaller than the best microwave clocks. For this reason, a redefinition of the SI second based on optical clocks seems possible in the near future. However, the operation of optical lattice clocks has not yet reached the reliability that microwave clocks have achieved so far. In this paper, we report on the operation of a strontium optical lattice clock that spans several weeks, with more than 80% uptime. We make use of this long integration time to demonstrate a reproducible measurement of frequency ratios between the strontium clock transition and microwave Cs primary and Rb secondary frequency standards.

  3. Probing the intrinsic optical Bloch-mode emission from a 3D photonic crystal

    NASA Astrophysics Data System (ADS)

    Hsieh, Mei-Li; Bur, James A.; Du, Qingguo; John, Sajeev; Lin, Shawn-Yu

    2016-10-01

    We report experimental observation of intrinsic Bloch-mode emission from a 3D tungsten photonic crystal at low thermal excitation. After the successful removal of conventional metallic emission (normal emission), it is possible to make an accurate comparison of the Bloch-mode and the normal emission. For all biases, we found that the emission intensity of the Bloch-mode is higher than that of the normal emission. The Bloch-mode emission also exhibits a slower dependence on (\\hslash ω /{k}bT) than that of the normal emission. The observed higher emission intensity and a different T-dependence is attributed to Bloch-mode assisted emission where emitters have been located into a medium having local density of states different than the isotropic case. Furthermore, our finite-difference time-domain (FDTD) simulation shows the presence of localized spots at metal-air boundaries and corners, having intense electric field. The enhanced plasmonic field and local non-equilibrium could induce a strong thermally stimulated emission and may be the cause of our unusual observation.

  4. Optical 3D laser measurement system for navigation of autonomous mobile robot

    NASA Astrophysics Data System (ADS)

    Básaca-Preciado, Luis C.; Sergiyenko, Oleg Yu.; Rodríguez-Quinonez, Julio C.; García, Xochitl; Tyrsa, Vera V.; Rivas-Lopez, Moises; Hernandez-Balbuena, Daniel; Mercorelli, Paolo; Podrygalo, Mikhail; Gurko, Alexander; Tabakova, Irina; Starostenko, Oleg

    2014-03-01

    In our current research, we are developing a practical autonomous mobile robot navigation system which is capable of performing obstacle avoiding task on an unknown environment. Therefore, in this paper, we propose a robot navigation system which works using a high accuracy localization scheme by dynamic triangulation. Our two main ideas are (1) integration of two principal systems, 3D laser scanning technical vision system (TVS) and mobile robot (MR) navigation system. (2) Novel MR navigation scheme, which allows benefiting from all advantages of precise triangulation localization of the obstacles, mostly over known camera oriented vision systems. For practical use, mobile robots are required to continue their tasks with safety and high accuracy on temporary occlusion condition. Presented in this work, prototype II of TVS is significantly improved over prototype I of our previous publications in the aspects of laser rays alignment, parasitic torque decrease and friction reduction of moving parts. The kinematic model of the MR used in this work is designed considering the optimal data acquisition from the TVS with the main goal of obtaining in real time, the necessary values for the kinematic model of the MR immediately during the calculation of obstacles based on the TVS data.

  5. Probing the intrinsic optical Bloch-mode emission from a 3D photonic crystal.

    PubMed

    Hsieh, Mei-Li; Bur, James A; Du, Qingguo; John, Sajeev; Lin, Shawn-Yu

    2016-10-14

    We report experimental observation of intrinsic Bloch-mode emission from a 3D tungsten photonic crystal at low thermal excitation. After the successful removal of conventional metallic emission (normal emission), it is possible to make an accurate comparison of the Bloch-mode and the normal emission. For all biases, we found that the emission intensity of the Bloch-mode is higher than that of the normal emission. The Bloch-mode emission also exhibits a slower dependence on [Formula: see text] than that of the normal emission. The observed higher emission intensity and a different T-dependence is attributed to Bloch-mode assisted emission where emitters have been located into a medium having local density of states different than the isotropic case. Furthermore, our finite-difference time-domain (FDTD) simulation shows the presence of localized spots at metal-air boundaries and corners, having intense electric field. The enhanced plasmonic field and local non-equilibrium could induce a strong thermally stimulated emission and may be the cause of our unusual observation. PMID:27606574

  6. Probing the intrinsic optical Bloch-mode emission from a 3D photonic crystal.

    PubMed

    Hsieh, Mei-Li; Bur, James A; Du, Qingguo; John, Sajeev; Lin, Shawn-Yu

    2016-10-14

    We report experimental observation of intrinsic Bloch-mode emission from a 3D tungsten photonic crystal at low thermal excitation. After the successful removal of conventional metallic emission (normal emission), it is possible to make an accurate comparison of the Bloch-mode and the normal emission. For all biases, we found that the emission intensity of the Bloch-mode is higher than that of the normal emission. The Bloch-mode emission also exhibits a slower dependence on [Formula: see text] than that of the normal emission. The observed higher emission intensity and a different T-dependence is attributed to Bloch-mode assisted emission where emitters have been located into a medium having local density of states different than the isotropic case. Furthermore, our finite-difference time-domain (FDTD) simulation shows the presence of localized spots at metal-air boundaries and corners, having intense electric field. The enhanced plasmonic field and local non-equilibrium could induce a strong thermally stimulated emission and may be the cause of our unusual observation.

  7. Modeling of mass and charge transport in a solid oxide fuel cell anode structure by a 3D lattice Boltzmann approach

    NASA Astrophysics Data System (ADS)

    Paradis, Hedvig; Andersson, Martin; Sundén, Bengt

    2016-08-01

    A 3D model at microscale by the lattice Boltzmann method (LBM) is proposed for part of an anode of a solid oxide fuel cell (SOFC) to analyze the interaction between the transport and reaction processes and structural parameters. The equations of charge, momentum, heat and mass transport are simulated in the model. The modeling geometry is created with randomly placed spheres to resemble the part of the anode structure close to the electrolyte. The electrochemical reaction processes are captured at specific sites where spheres representing Ni and YSZ materials are present with void space. This work focuses on analyzing the effect of structural parameters such as porosity, and percentage of active reaction sites on the ionic current density and concentration of H2 using LBM. It is shown that LBM can be used to simulate an SOFC anode at microscale and evaluate the effect of structural parameters on the transport processes to improve the performance of the SOFC anode. It was found that increasing the porosity from 30 to 50 % decreased the ionic current density due to a reduction in the number of reaction sites. Also the consumption of H2 decreased with increasing porosity. When the percentage of active reaction sites was increased while the porosity was kept constant, the ionic current density increased. However, the H2 concentration was slightly reduced when the percentage of active reaction sites was increased. The gas flow tortuosity decreased with increasing porosity.

  8. High speed 3D endoscopic optical frequency domain imaging probe for lung cancer diagnosis

    NASA Astrophysics Data System (ADS)

    Li, Jianan; Feroldi, Fabio; Mo, Jianhua; Helderman, Frank; de Groot, Mattijs; de Boer, Johannes F.

    2013-06-01

    We present a miniature motorized endoscopic probe for Optical Frequency Domain Imaging with an outer diameter of 1.65 mm and a rotation speed of 3,000 - 12,500 rpm. The probe has a motorized distal end which provides a significant advantage over proximally driven probes since it does not require a drive shaft to transfer the rotational torque to the distal end of the probe and functions without a fiber rotary junction. The probe has a focal Full Width at Half Maximum of 9.6 μm and a working distance of 0.47 mm. We analyzed the non-uniform rotation distortion and found a location fluctuation of only 1.87° in repeated measurements of the same object. The probe was integrated in a high-speed Optical Frequency Domain Imaging setup at 1310 nm. We demonstrated its performance with imaging ex vivo pig bronchial and in vivo goat lung.

  9. Depth-resolved 3D visualization of coronary microvasculature with optical microangiography

    NASA Astrophysics Data System (ADS)

    Qin, Wan; Roberts, Meredith A.; Qi, Xiaoli; Murry, Charles E.; Zheng, Ying; Wang, Ruikang K.

    2016-11-01

    In this study, we propose a novel implementation of optical coherence tomography-based angiography combined with ex vivo perfusion of fixed hearts to visualize coronary microvascular structure and function. The extracorporeal perfusion of Intralipid solution allows depth-resolved angiographic imaging, control of perfusion pressure, and high-resolution optical microangiography. The imaging technique offers new opportunities for microcirculation research in the heart, which has been challenging due to motion artifacts and the lack of independent control of pressure and flow. With the ability to precisely quantify structural and functional features, this imaging platform has broad potential for the study of the pathophysiology of microvasculature in the heart as well as other organs.

  10. Fast, background-free, 3D super-resolution optical fluctuation imaging (SOFI).

    PubMed

    Dertinger, T; Colyer, R; Iyer, G; Weiss, S; Enderlein, J

    2009-12-29

    Super-resolution optical microscopy is a rapidly evolving area of fluorescence microscopy with a tremendous potential for impacting many fields of science. Several super-resolution methods have been developed over the last decade, all capable of overcoming the fundamental diffraction limit of light. We present here an approach for obtaining subdiffraction limit optical resolution in all three dimensions. This method relies on higher-order statistical analysis of temporal fluctuations (caused by fluorescence blinking/intermittency) recorded in a sequence of images (movie). We demonstrate a 5-fold improvement in spatial resolution by using a conventional wide-field microscope. This resolution enhancement is achieved in iterative discrete steps, which in turn allows the evaluation of images at different resolution levels. Even at the lowest level of resolution enhancement, our method features significant background reduction and thus contrast enhancement and is demonstrated on quantum dot-labeled microtubules of fibroblast cells.

  11. Two-photon imaging of a magneto-fluorescent indicator for 3D optical magnetometry.

    PubMed

    Lee, Hohjai; Brinks, Daan; Cohen, Adam E

    2015-10-19

    We developed an optical method to visualize the three-dimensional distribution of magnetic field strength around magnetic microstructures. We show that the two-photon-excited fluorescence of a chained donor-bridge-acceptor compound, phenanthrene-(CH2)12-O-(CH2)2-N,N-dimethylaniline, is sensitive to ambient magnetic field strength. A test structure is immersed in a solution of the magneto-fluorescent indicator and a custom two-photon microscope maps the fluorescence of this compound. The decay kinetics of the electronic excited state provide a measure of magnetic field that is insensitive to photobleaching, indicator concentration, or local variations in optical excitation or collection efficiency. PMID:26480460

  12. 3D shape tracking of minimally invasive medical instruments using optical frequency domain reflectometry

    NASA Astrophysics Data System (ADS)

    Parent, Francois; Kanti Mandal, Koushik; Loranger, Sebastien; Watanabe Fernandes, Eric Hideki; Kashyap, Raman; Kadoury, Samuel

    2016-03-01

    We propose here a new alternative to provide real-time device tracking during minimally invasive interventions using a truly-distributed strain sensor based on optical frequency domain reflectometry (OFDR) in optical fibers. The guidance of minimally invasive medical instruments such as needles or catheters (ex. by adding a piezoelectric coating) has been the focus of extensive research in the past decades. Real-time tracking of instruments in medical interventions facilitates image guidance and helps the user to reach a pre-localized target more precisely. Image-guided systems using ultrasound imaging and shape sensors based on fiber Bragg gratings (FBG)-embedded optical fibers can provide retroactive feedback to the user in order to reach the targeted areas with even more precision. However, ultrasound imaging with electro-magnetic tracking cannot be used in the magnetic resonance imaging (MRI) suite, while shape sensors based on FBG embedded in optical fibers provides discrete values of the instrument position, which requires approximations to be made to evaluate its global shape. This is why a truly-distributed strain sensor based on OFDR could enhance the tracking accuracy. In both cases, since the strain is proportional to the radius of curvature of the fiber, a strain sensor can provide the three-dimensional shape of medical instruments by simply inserting fibers inside the devices. To faithfully follow the shape of the needle in the tracking frame, 3 fibers glued in a specific geometry are used, providing 3 degrees of freedom along the fiber. Near real-time tracking of medical instruments is thus obtained offering clear advantages for clinical monitoring in remotely controlled catheter or needle guidance. We present results demonstrating the promising aspects of this approach as well the limitations of using the OFDR technique.

  13. Optical lattice modulation spectroscopy for spin-orbit coupled bosons

    NASA Astrophysics Data System (ADS)

    De Sarkar, Sangita; Sensarma, Rajdeep; Sengupta, K.

    2015-11-01

    Interacting bosons with two "spin" states in a lattice show superfluid-insulator phase transitions in the presence of spin-orbit coupling. Depending on the parameter regime, bosons in the superfluid phase can condense to either a zero-momentum state or to one or multiple states with finite momentum, leading to an unconventional superfluid phase. We study the response of such a system to modulation of the optical lattice potential. We show that the change in momentum distribution after lattice modulation shows distinct patterns in the Mott and the superfluid phase and these patterns can be used to detect these phases and the quantum phase transition between them. Further, the momentum-resolved optical modulation spectroscopy can identify both the gapless (Goldstone) and gapped amplitude (Higgs) mode of the superfluid phase and clearly distinguish between the superfluid phases with a zero-momentum condensate and a twisted superfluid phase by looking at the location of these modes in the Brillouin zone. We discuss experiments which can test our theory.

  14. Probing many-body interactions in an optical lattice clock

    SciTech Connect

    Rey, A.M.; Gorshkov, A.V.; Kraus, C.V.; Martin, M.J.; Bishof, M.; Swallows, M.D.; Zhang, X.; Benko, C.; Ye, J.; Lemke, N.D.; Ludlow, A.D.

    2014-01-15

    We present a unifying theoretical framework that describes recently observed many-body effects during the interrogation of an optical lattice clock operated with thousands of fermionic alkaline earth atoms. The framework is based on a many-body master equation that accounts for the interplay between elastic and inelastic p-wave and s-wave interactions, finite temperature effects and excitation inhomogeneity during the quantum dynamics of the interrogated atoms. Solutions of the master equation in different parameter regimes are presented and compared. It is shown that a general solution can be obtained by using the so called Truncated Wigner Approximation which is applied in our case in the context of an open quantum system. We use the developed framework to model the density shift and decay of the fringes observed during Ramsey spectroscopy in the JILA {sup 87}Sr and NIST {sup 171}Yb optical lattice clocks. The developed framework opens a suitable path for dealing with a variety of strongly-correlated and driven open-quantum spin systems. -- Highlights: •Derived a theoretical framework that describes many-body effects in a lattice clock. •Validated the analysis with recent experimental measurements. •Demonstrated the importance of beyond mean field corrections in the dynamics.

  15. Optical lattices with exceptional points in the continuum

    NASA Astrophysics Data System (ADS)

    Longhi, Stefano; Della Valle, Giuseppe

    2014-05-01

    The spectral, dynamical, and topological properties of physical systems described by non-Hermitian (including PT-symmetric) Hamiltonians are deeply modified by the appearance of exceptional points and spectral singularities. Here we show that exceptional points in the continuum can arise in non-Hermitian (yet admitting an entirely real-valued energy spectrum) optical lattices with engineered defects. At an exceptional point, the lattice sustains a bound state with an energy embedded in the spectrum of scattered states, similar to the von Neumann-Wigner bound states in the continuum of Hermitian lattices. However, the dynamical and scattering properties of the bound state at an exceptional point are deeply different from those of ordinary von Neumann-Wigner bound states in a Hermitian system. In particular, the bound state in the continuum at an exceptional point is an unstable state that can secularly grow by an infinitesimal perturbation. Such properties are discussed in details for transport of discretized light in a PT-symmetric array of coupled optical waveguides, which could provide an experimentally accessible system to observe exceptional points in the continuum.

  16. Deviations from Boltzmann-Gibbs Statistics in Confined Optical Lattices

    NASA Astrophysics Data System (ADS)

    Dechant, Andreas; Kessler, David A.; Barkai, Eli

    2015-10-01

    We investigate the semiclassical phase-space probability distribution P (x ,p ) of cold atoms in a Sisyphus cooling lattice with an additional harmonic confinement. We pose the question of whether this nonequilibrium steady state satisfies the equivalence of energy and probability. This equivalence is the foundation of Boltzmann-Gibbs and generalized thermostatic statistics, and a prerequisite for the description in terms of a temperature. At large energies, P (x ,p ) depends only on the Hamiltonian H (x ,p ) and the answer to the question is yes. In distinction to the Boltzmann-Gibbs state, the large-energy tails are power laws P (x ,p )∝H (x ,p )-1/D, where D is related to the depth of the optical lattice. At intermediate energies, however, P (x ,p ) cannot be expressed as a function of the Hamiltonian and the equivalence between energy and probability breaks down. As a consequence the average potential and kinetic energy differ and no well-defined temperature can be assigned. The Boltzmann-Gibbs state is regained only in the limit of deep optical lattices. For strong confinement relative to the damping, we derive an explicit expression for the stationary phase-space distribution.

  17. Bayesian estimation of optical properties of the human head via 3D structural MRI

    NASA Astrophysics Data System (ADS)

    Barnett, Alexander H.; Culver, Joseph P.; Sorensen, A. Gregory; Dale, Anders M.; Boas, David A.

    2003-10-01

    Knowledge of the baseline optical properties of the tissues of the human head is essential for absolute cerebral oximetry, and for quantitative studies of brain activation. In this work we numerically model the utility of signals from a small 6-optode time-resolved diffuse optical tomographic apparatus for inferring baseline scattering and absorption coefficients of the scalp, skull and brain, when complete geometric information is available from magnetic resonance imaging (MRI). We use an optical model where MRI-segmented tissues are assumed homogeneous. We introduce a noise model capturing both photon shot noise and forward model numerical accuracy, and use Bayesian inference to predict errorbars and correlations on the measurments. We also sample from the full posterior distribution using Markov chain Monte Carlo. We conclude that ~ 106 detected photons are sufficient to measure the brain"s scattering and absorption to a few percent. We present preliminary results using a fast multi-layer slab model, comparing the case when layer thicknesses are known versus unknown.

  18. Small-Field Measurements of 3D Polymer Gel Dosimeters through Optical Computed Tomography

    PubMed Central

    Shih, Cheng-Ting; Lee, Yao-Ting; Wu, Shin-Hua; Yao, Chun-Hsu; Hsieh, Bor-Tsung

    2016-01-01

    With advances in therapeutic instruments and techniques, three-dimensional dose delivery has been widely used in radiotherapy. The verification of dose distribution in a small field becomes critical because of the obvious dose gradient within the field. The study investigates the dose distributions of various field sizes by using NIPAM polymer gel dosimeter. The dosimeter consists of 5% gelatin, 5% monomers, 3% cross linkers, and 5 mM THPC. After irradiation, a 24 to 96 hour delay was applied, and the gel dosimeters were read by a cone beam optical computed tomography (optical CT) scanner. The dose distributions measured by the NIPAM gel dosimeter were compared to the outputs of the treatment planning system using gamma evaluation. For the criteria of 3%/3 mm, the pass rates for 5 × 5, 3 × 3, 2 × 2, 1 × 1, and 0.5 × 0.5 cm2 were as high as 91.7%, 90.7%, 88.2%, 74.8%, and 37.3%, respectively. For the criteria of 5%/5 mm, the gamma pass rates of the 5 × 5, 3 × 3, and 2 × 2 cm2 fields were over 99%. The NIPAM gel dosimeter provides high chemical stability. With cone-beam optical CT readouts, the NIPAM polymer gel dosimeter has potential for clinical dose verification of small-field irradiation. PMID:26974434

  19. Small-Field Measurements of 3D Polymer Gel Dosimeters through Optical Computed Tomography.

    PubMed

    Shih, Tian-Yu; Wu, Jay; Shih, Cheng-Ting; Lee, Yao-Ting; Wu, Shin-Hua; Yao, Chun-Hsu; Hsieh, Bor-Tsung

    2016-01-01

    With advances in therapeutic instruments and techniques, three-dimensional dose delivery has been widely used in radiotherapy. The verification of dose distribution in a small field becomes critical because of the obvious dose gradient within the field. The study investigates the dose distributions of various field sizes by using NIPAM polymer gel dosimeter. The dosimeter consists of 5% gelatin, 5% monomers, 3% cross linkers, and 5 mM THPC. After irradiation, a 24 to 96 hour delay was applied, and the gel dosimeters were read by a cone beam optical computed tomography (optical CT) scanner. The dose distributions measured by the NIPAM gel dosimeter were compared to the outputs of the treatment planning system using gamma evaluation. For the criteria of 3%/3 mm, the pass rates for 5 × 5, 3 × 3, 2 × 2, 1 × 1, and 0.5 × 0.5 cm2 were as high as 91.7%, 90.7%, 88.2%, 74.8%, and 37.3%, respectively. For the criteria of 5%/5 mm, the gamma pass rates of the 5 × 5, 3 × 3, and 2 × 2 cm2 fields were over 99%. The NIPAM gel dosimeter provides high chemical stability. With cone-beam optical CT readouts, the NIPAM polymer gel dosimeter has potential for clinical dose verification of small-field irradiation. PMID:26974434

  20. Small-Field Measurements of 3D Polymer Gel Dosimeters through Optical Computed Tomography.

    PubMed

    Shih, Tian-Yu; Wu, Jay; Shih, Cheng-Ting; Lee, Yao-Ting; Wu, Shin-Hua; Yao, Chun-Hsu; Hsieh, Bor-Tsung

    2016-01-01

    With advances in therapeutic instruments and techniques, three-dimensional dose delivery has been widely used in radiotherapy. The verification of dose distribution in a small field becomes critical because of the obvious dose gradient within the field. The study investigates the dose distributions of various field sizes by using NIPAM polymer gel dosimeter. The dosimeter consists of 5% gelatin, 5% monomers, 3% cross linkers, and 5 mM THPC. After irradiation, a 24 to 96 hour delay was applied, and the gel dosimeters were read by a cone beam optical computed tomography (optical CT) scanner. The dose distributions measured by the NIPAM gel dosimeter were compared to the outputs of the treatment planning system using gamma evaluation. For the criteria of 3%/3 mm, the pass rates for 5 × 5, 3 × 3, 2 × 2, 1 × 1, and 0.5 × 0.5 cm2 were as high as 91.7%, 90.7%, 88.2%, 74.8%, and 37.3%, respectively. For the criteria of 5%/5 mm, the gamma pass rates of the 5 × 5, 3 × 3, and 2 × 2 cm2 fields were over 99%. The NIPAM gel dosimeter provides high chemical stability. With cone-beam optical CT readouts, the NIPAM polymer gel dosimeter has potential for clinical dose verification of small-field irradiation.

  1. Optical Microangiography: A Label Free 3D Imaging Technology to Visualize and Quantify Blood Circulations within Tissue Beds in vivo

    PubMed Central

    Wang, Ruikang K

    2009-01-01

    Optical microangiography (OMAG) is a recently developed volumetric imaging technique that is capable of producing 3D images of dynamic blood perfusion within microcirculatory tissue beds in vivo. The imaging contrast of OMAG image is based on the intrinsic optical scattering signals backscattered by the moving blood cells in patent blood vessels, thus it is a label free imaging technique. In this paper, I will first discuss its recent developments that use a constant modulation frequency introduced in the spectral interferograms to achieve the blood perfusion imaging. I will then introduce its latest development that utilizes the inherent blood flow to modulate the spectral interferograms to realize the blood perfusion imaging. Finally, examples of using OMAG to delineate the dynamic blood perfusion, down to capillary level resolution, within living tissues are given, including cortical blood perfusion in the brain of small animals and blood flow within human retina and choroids. PMID:20657761

  2. Optical Microangiography: A Label Free 3D Imaging Technology to Visualize and Quantify Blood Circulations within Tissue Beds in vivo.

    PubMed

    Wang, Ruikang K

    2010-05-01

    Optical microangiography (OMAG) is a recently developed volumetric imaging technique that is capable of producing 3D images of dynamic blood perfusion within microcirculatory tissue beds in vivo. The imaging contrast of OMAG image is based on the intrinsic optical scattering signals backscattered by the moving blood cells in patent blood vessels, thus it is a label free imaging technique. In this paper, I will first discuss its recent developments that use a constant modulation frequency introduced in the spectral interferograms to achieve the blood perfusion imaging. I will then introduce its latest development that utilizes the inherent blood flow to modulate the spectral interferograms to realize the blood perfusion imaging. Finally, examples of using OMAG to delineate the dynamic blood perfusion, down to capillary level resolution, within living tissues are given, including cortical blood perfusion in the brain of small animals and blood flow within human retina and choroids.

  3. 3D refraction correction and extraction of clinical parameters from spectral domain optical coherence tomography of the cornea.

    PubMed

    Zhao, Mingtao; Kuo, Anthony N; Izatt, Joseph A

    2010-04-26

    Capable of three-dimensional imaging of the cornea with micrometer-scale resolution, spectral domain-optical coherence tomography (SDOCT) offers potential advantages over Placido ring and Scheimpflug photography based systems for accurate extraction of quantitative keratometric parameters. In this work, an SDOCT scanning protocol and motion correction algorithm were implemented to minimize the effects of patient motion during data acquisition. Procedures are described for correction of image data artifacts resulting from 3D refraction of SDOCT light in the cornea and from non-idealities of the scanning system geometry performed as a pre-requisite for accurate parameter extraction. Zernike polynomial 3D reconstruction and a recursive half searching algorithm (RHSA) were implemented to extract clinical keratometric parameters including anterior and posterior radii of curvature, central cornea optical power, central corneal thickness, and thickness maps of the cornea. Accuracy and repeatability of the extracted parameters obtained using a commercial 859nm SDOCT retinal imaging system with a corneal adapter were assessed using a rigid gas permeable (RGP) contact lens as a phantom target. Extraction of these parameters was performed in vivo in 3 patients and compared to commercial Placido topography and Scheimpflug photography systems. The repeatability of SDOCT central corneal power measured in vivo was 0.18 Diopters, and the difference observed between the systems averaged 0.1 Diopters between SDOCT and Scheimpflug photography, and 0.6 Diopters between SDOCT and Placido topography.

  4. High refractive index immersion liquid for superresolution 3D imaging using sapphire-based aplanatic numerical aperture increasing lens optics.

    PubMed

    Laskar, Junaid M; Shravan Kumar, P; Herminghaus, Stephan; Daniels, Karen E; Schröter, Matthias

    2016-04-20

    Optically transparent immersion liquids with refractive index (n∼1.77) to match the sapphire-based aplanatic numerical aperture increasing lens (aNAIL) are necessary for achieving deep 3D imaging with high spatial resolution. We report that antimony tribromide (SbBr3) salt dissolved in liquid diiodomethane (CH2I2) provides a new high refractive index immersion liquid for optics applications. The refractive index is tunable from n=1.74 (pure) to n=1.873 (saturated), by adjusting either salt concentration or temperature; this allows it to match (or even exceed) the refractive index of sapphire. Importantly, the solution gives excellent light transmittance in the ultraviolet to near-infrared range, an improvement over commercially available immersion liquids. This refractive-index-matched immersion liquid formulation has enabled us to develop a sapphire-based aNAIL objective that has both high numerical aperture (NA=1.17) and long working distance (WD=12  mm). This opens up new possibilities for deep 3D imaging with high spatial resolution. PMID:27140083

  5. High refractive index immersion liquid for superresolution 3D imaging using sapphire-based aplanatic numerical aperture increasing lens optics.

    PubMed

    Laskar, Junaid M; Shravan Kumar, P; Herminghaus, Stephan; Daniels, Karen E; Schröter, Matthias

    2016-04-20

    Optically transparent immersion liquids with refractive index (n∼1.77) to match the sapphire-based aplanatic numerical aperture increasing lens (aNAIL) are necessary for achieving deep 3D imaging with high spatial resolution. We report that antimony tribromide (SbBr3) salt dissolved in liquid diiodomethane (CH2I2) provides a new high refractive index immersion liquid for optics applications. The refractive index is tunable from n=1.74 (pure) to n=1.873 (saturated), by adjusting either salt concentration or temperature; this allows it to match (or even exceed) the refractive index of sapphire. Importantly, the solution gives excellent light transmittance in the ultraviolet to near-infrared range, an improvement over commercially available immersion liquids. This refractive-index-matched immersion liquid formulation has enabled us to develop a sapphire-based aNAIL objective that has both high numerical aperture (NA=1.17) and long working distance (WD=12  mm). This opens up new possibilities for deep 3D imaging with high spatial resolution.

  6. Master-slave interferometry for parallel spectral domain interferometry sensing and versatile 3D optical coherence tomography.

    PubMed

    Podoleanu, Adrian Gh; Bradu, Adrian

    2013-08-12

    Conventional spectral domain interferometry (SDI) methods suffer from the need of data linearization. When applied to optical coherence tomography (OCT), conventional SDI methods are limited in their 3D capability, as they cannot deliver direct en-face cuts. Here we introduce a novel SDI method, which eliminates these disadvantages. We denote this method as Master - Slave Interferometry (MSI), because a signal is acquired by a slave interferometer for an optical path difference (OPD) value determined by a master interferometer. The MSI method radically changes the main building block of an SDI sensor and of a spectral domain OCT set-up. The serially provided signal in conventional technology is replaced by multiple signals, a signal for each OPD point in the object investigated. This opens novel avenues in parallel sensing and in parallelization of signal processing in 3D-OCT, with applications in high- resolution medical imaging and microscopy investigation of biosamples. Eliminating the need of linearization leads to lower cost OCT systems and opens potential avenues in increasing the speed of production of en-face OCT images in comparison with conventional SDI.

  7. Light scattering by ultracold atoms in an optical lattice

    SciTech Connect

    Rist, Stefan; Menotti, Chiara; Morigi, Giovanna

    2010-01-15

    We investigate theoretically light scattering of photons by ultracold atoms in an optical lattice in the linear regime. A full quantum theory for the atom-photon interactions is developed as a function of the atomic state in the lattice along the Mott-insulator-superfluid phase transition, and the photonic-scattering cross section is evaluated as a function of the energy and of the direction of emission. The predictions of this theory are compared with the theoretical results of a recent work on Bragg scattering in time-of-flight measurements [A.M. Rey et al., Phys. Rev. A 72, 023407 (2005)]. We show that, when performing Bragg spectroscopy with light scattering, the photon recoil gives rise to an additional atomic site-to-site hopping, which can interfere with ordinary tunneling of matter waves and can significantly affect the photonic-scattering cross section.

  8. Tunneling, diffusion, and dissociation of Feshbach molecules in optical lattices

    NASA Astrophysics Data System (ADS)

    Bailey, Taylor; Bertulani, Carlos A.; Timmermans, Eddy

    2012-03-01

    The quantum dynamics of an ultracold diatomic molecule tunneling and diffusing in a one-dimensional optical lattice exhibits unusual features. While it is known that the process of quantum tunneling through potential barriers can break up a bound-state molecule into a pair of dissociated atoms, interference and reassociation produce intricate patterns in the time-evolving site-dependent probability distribution for finding atoms and bound-state molecules. We find that the bound-state molecule is unusually resilient against break up at ultralow binding energy Eb (Eb much smaller than the barrier height of the lattice potential). After an initial transient, the bound-state molecule spreads with a width that grows as the square root of time. Surprisingly, the width of the probability of finding dissociated atoms does not increase with time as a power law.

  9. Dynamical properties of ultracold bosons in an optical lattice

    SciTech Connect

    Huber, S. D.; Blatter, G.; Altman, E.; Buechler, H. P.

    2007-02-15

    We study the excitation spectrum of strongly correlated lattice bosons for the Mott-insulating phase and for the superfluid phase close to localization. Within a Schwinger-boson mean-field approach we find two gapped modes in the Mott insulator and the combination of a sound mode (Goldstone) and a gapped (Higgs) mode in the superfluid. To make our findings comparable with experimental results, we calculate the dynamic structure factor as well as the linear response to the optical lattice modulation introduced by Stoeferle et al. [Phys. Rev. Lett. 92, 130403 (2004)]. We find that the puzzling finite frequency absorption observed in the superfluid phase could be explained via the excitation of the gapped (Higgs) mode. We check the consistency of our results with an adapted f-sum rule and propose an extension of the experimental technique by Stoeferle et al. to further verify our findings.

  10. Synthetic Spin-Orbit Coupling in an Optical Lattice Clock.

    PubMed

    Wall, Michael L; Koller, Andrew P; Li, Shuming; Zhang, Xibo; Cooper, Nigel R; Ye, Jun; Rey, Ana Maria

    2016-01-22

    We propose the use of optical lattice clocks operated with fermionic alkaline-earth atoms to study spin-orbit coupling (SOC) in interacting many-body systems. The SOC emerges naturally during the clock interrogation, when atoms are allowed to tunnel and accumulate a phase set by the ratio of the "magic" lattice wavelength to the clock transition wavelength. We demonstrate how standard protocols such as Rabi and Ramsey spectroscopy that take advantage of the sub-Hertz resolution of state-of-the-art clock lasers can perform momentum-resolved band tomography and determine SOC-induced s-wave collisions in nuclear-spin-polarized fermions. With the use of a second counterpropagating clock beam, we propose a method for engineering controlled atomic transport and study how it is modified by p- and s-wave interactions. The proposed spectroscopic probes provide clean and well-resolved signatures at current clock operating temperatures. PMID:26849600

  11. One-dimensional optical lattices and impenetrable bosons

    SciTech Connect

    Cazalilla, M.A. |

    2003-05-01

    We study the limit of large on-site repulsion of the one-dimensional Bose-Hubbard model at low densities, and derive a strong-coupling effective Hamiltonian. By taking the lattice parameter to zero, the Hamiltonian becomes a continuum model of fermions with attractive interactions. The leading corrections to the internal energy of a hard-core-boson (Tonks) gas as well as the (finite temperature) pair correlations of a strongly interacting Bose gas are calculated. We explore the possibility of realizing, in an optical lattice, a Luttinger liquid with stronger density correlations than the Tonks gas. A quantum phase transition to a charge-density-wave Mott insulator is also discussed.

  12. Synthetic Spin-Orbit Coupling in an Optical Lattice Clock

    NASA Astrophysics Data System (ADS)

    Wall, Michael L.; Koller, Andrew P.; Li, Shuming; Zhang, Xibo; Cooper, Nigel R.; Ye, Jun; Rey, Ana Maria

    2016-01-01

    We propose the use of optical lattice clocks operated with fermionic alkaline-earth atoms to study spin-orbit coupling (SOC) in interacting many-body systems. The SOC emerges naturally during the clock interrogation, when atoms are allowed to tunnel and accumulate a phase set by the ratio of the "magic" lattice wavelength to the clock transition wavelength. We demonstrate how standard protocols such as Rabi and Ramsey spectroscopy that take advantage of the sub-Hertz resolution of state-of-the-art clock lasers can perform momentum-resolved band tomography and determine SOC-induced s -wave collisions in nuclear-spin-polarized fermions. With the use of a second counterpropagating clock beam, we propose a method for engineering controlled atomic transport and study how it is modified by p - and s -wave interactions. The proposed spectroscopic probes provide clean and well-resolved signatures at current clock operating temperatures.

  13. Spin Gradient Thermometry for Ultracold Atoms in Optical Lattices

    SciTech Connect

    Weld, David M.; Medley, Patrick; Miyake, Hirokazu; Hucul, David; Pritchard, David E.; Ketterle, Wolfgang

    2009-12-11

    We demonstrate spin gradient thermometry, a new general method of measuring the temperature of ultracold atoms in optical lattices. We realize a mixture of spins separated by a magnetic field gradient. Measurement of the width of the transition layer between the two spin domains serves as a new method of thermometry which is observed to work over a broad range of lattice depths and temperatures, including in the Mott insulator regime. We demonstrate the thermometry using ultracold rubidium atoms, and suggest that interesting spin physics can be realized in this system. The lowest measured temperature is 1 nK, indicating that the system has reached the quantum regime, where insulating shells are separated by superfluid layers.

  14. Birefringent breakup of Dirac fermions on a square optical lattice

    SciTech Connect

    Kennett, Malcolm P.; Komeilizadeh, Nazanin; Kaveh, Kamran; Smith, Peter M.

    2011-05-15

    We introduce a lattice model for fermions in a spatially periodic magnetic field that also has spatially periodic hopping amplitudes. We discuss how this model might be realized with cold atoms in an artificial magnetic field on a square optical lattice. When there is an average flux of half a flux quantum per plaquette, the spectrum of low-energy excitations can be described by massless Dirac fermions in which the usually doubly degenerate Dirac cones split into cones with different ''speeds of light.'' These gapless birefringent Dirac fermions arise because of broken chiral symmetry in the kinetic energy term of the effective low-energy Hamiltonian. We characterize the effects of various perturbations to the low-energy spectrum, including staggered potentials, interactions, and domain-wall topological defects.

  15. Optical lattice clock with atoms confined in a shallow trap

    SciTech Connect

    Lemonde, Pierre; Wolf, Peter

    2005-09-15

    We study the trap depth requirement for the realization of an optical clock using atoms confined in a lattice. We show that site-to-site tunneling leads to a residual sensitivity to the atom dynamics hence requiring large depths [(50-100)E{sub r} for Sr] to avoid any frequency shift or line broadening of the atomic transition at the 10{sup -17}-10{sup -18} level. Such large depths and the corresponding laser power may, however, lead to difficulties (e.g., higher-order light shifts, two-photon ionization, technical difficulties) and therefore one would like to operate the clock in much shallower traps. To circumvent this problem we propose the use of an accelerated lattice. Acceleration lifts the degeneracy between adjacents potential wells which strongly inhibits tunneling. We show that using the Earth's gravity, much shallower traps (down to 5E{sub r} for Sr) can be used for the same accuracy goal.

  16. Zeptonewton force sensing with nanospheres in an optical lattice

    NASA Astrophysics Data System (ADS)

    Ranjit, Gambhir; Cunningham, Mark; Casey, Kirsten; Geraci, Andrew A.

    2016-05-01

    Optically trapped nanospheres in high vacuum experience little friction and hence are promising for ultrasensitive force detection. Here we demonstrate measurement times exceeding 105 s and zeptonewton force sensitivity with laser-cooled silica nanospheres trapped in an optical lattice. The sensitivity achieved exceeds that of conventional room-temperature solid-state force sensors by over an order of magnitude, and enables a variety of applications including electric-field sensing, inertial sensing, and gravimetry. The particle is confined at the antinodes of the optical standing wave, and by studying the motion of a particle which has been moved to an adjacent trapping site, the known spacing of the antinodes can be used to calibrate the displacement spectrum of the particle. Finally, we study the dependence of the trap stability and lifetime on the laser intensity and gas pressure, and examine the heating rate of the particle in vacuum without feedback cooling.

  17. Development of 171Yb optical lattice clock at KRISS

    NASA Astrophysics Data System (ADS)

    Mun, Jongchul; Park, Chang Yong; Yu, Dai-Hyuk; Lee, Won-Kyu; Eon Park, Sang; Kwon, Taeg Yong; Lee, Sang-Bum

    2012-06-01

    We measured the absolute frequency of the optical clock transition 1S0 (F = 1/2) - 3P0 (F = 1/2) of 171Yb atoms confined in a one-dimensional optical lattice and it was determined to be 518 295 836 590 865.7 (9.2) Hz. The measured frequency was calibrated to the Coordinated Universal Time (UTC) by using an optical frequency comb of which frequency was phase-locked to a hydrogen maser as a flywheel oscillator traceable to the UTC. The magic wavelength was also measured as 394 798.48 (79) GHz. The results are in good agreement with two previous measurements of other institutes within the specified uncertainty of this work.

  18. High performance computing for a 3-D optical diffraction tomographic application in fluid velocimetry.

    PubMed

    Lobera, Julia; Ortega, Gloria; García, Inmaculada; Arroyo, María del Pilar; Garzón, Ester M

    2015-02-23

    Optical Diffraction Tomography has been recently introduced in fluid velocimetry to provide three dimensional information of seeding particle locations. In general, image reconstruction methods at visible wavelengths have to account for diffraction. Linear approximation has been used for three-dimensional image reconstruction, but a non-linear and iterative reconstruction method is required when multiple scattering is not negligible. Non-linear methods require the solution of the Helmholtz equation, computationally highly demanding due to the size of the problem. The present work shows the results of a non-linear method customized for spherical particle location using GPU computing and a made-to-measure storing format.

  19. Quantum simulations of lattice gauge theories using ultracold atoms in optical lattices

    NASA Astrophysics Data System (ADS)

    Zohar, Erez; Cirac, J. Ignacio; Reznik, Benni

    2016-01-01

    Can high-energy physics be simulated by low-energy, non-relativistic, many-body systems such as ultracold atoms? Such ultracold atomic systems lack the type of symmetries and dynamical properties of high energy physics models: in particular, they manifest neither local gauge invariance nor Lorentz invariance, which are crucial properties of the quantum field theories which are the building blocks of the standard model of elementary particles. However, it turns out, surprisingly, that there are ways to configure an atomic system to manifest both local gauge invariance and Lorentz invariance. In particular, local gauge invariance can arise either as an effective low-energy symmetry, or as an exact symmetry, following from the conservation laws in atomic interactions. Hence, one could hope that such quantum simulators may lead to a new type of (table-top) experiments which will be used to study various QCD (quantum chromodynamics) phenomena, such as the confinement of dynamical quarks, phase transitions and other effects, which are inaccessible using the currently known computational methods. In this report, we review the Hamiltonian formulation of lattice gauge theories, and then describe our recent progress in constructing the quantum simulation of Abelian and non-Abelian lattice gauge theories in 1  +  1 and 2  +  1 dimensions using ultracold atoms in optical lattices.

  20. Quantum simulations of lattice gauge theories using ultracold atoms in optical lattices.

    PubMed

    Zohar, Erez; Cirac, J Ignacio; Reznik, Benni

    2016-01-01

    Can high-energy physics be simulated by low-energy, non-relativistic, many-body systems such as ultracold atoms? Such ultracold atomic systems lack the type of symmetries and dynamical properties of high energy physics models: in particular, they manifest neither local gauge invariance nor Lorentz invariance, which are crucial properties of the quantum field theories which are the building blocks of the standard model of elementary particles. However, it turns out, surprisingly, that there are ways to configure an atomic system to manifest both local gauge invariance and Lorentz invariance. In particular, local gauge invariance can arise either as an effective low-energy symmetry, or as an exact symmetry, following from the conservation laws in atomic interactions. Hence, one could hope that such quantum simulators may lead to a new type of (table-top) experiments which will be used to study various QCD (quantum chromodynamics) phenomena, such as the confinement of dynamical quarks, phase transitions and other effects, which are inaccessible using the currently known computational methods. In this report, we review the Hamiltonian formulation of lattice gauge theories, and then describe our recent progress in constructing the quantum simulation of Abelian and non-Abelian lattice gauge theories in 1  +  1 and 2  +  1 dimensions using ultracold atoms in optical lattices. PMID:26684222

  1. Nearly-one-dimensional self-attractive Bose-Einstein condensates in optical lattices

    SciTech Connect

    Salasnich, L.; Toigo, F.; Cetoli, A.; Malomed, B. A.

    2007-03-15

    Within the framework of a mean-field description, we investigate atomic Bose-Einstein condensates, with attraction between atoms, under the action of a strong transverse confinement and periodic [optical-lattice (OL)] axial potential. Using a combination of the variational approximation, one-dimensional (1D) nonpolynomial Schroedinger equation, and direct numerical solutions of the underlying 3D Gross-Pitaevskii equation, we show that the ground state of the condensate is a soliton belonging to the semi-infinite band gap of the periodic potential. The soliton may be confined to a single cell of the lattice or extended to several cells, depending on the effective self-attraction strength g (which is proportional to the number of atoms bound in the soliton) and depth of the potential, V{sub 0}, the increase of V{sub 0} leading to strong compression of the soliton. We demonstrate that the OL is an effective tool to control the soliton's shape. It is found that, due to the 3D character of the underlying setting, the ground-state soliton collapses at a critical value of the strength, g=g{sub c}, which gradually decreases with the increase of V{sub 0}; under typical experimental conditions, the corresponding maximum number of {sup 7}Li atoms in the soliton, N{sub max}, ranges between 8000 and 4000. Examples of stable multipeaked solitons are also found in the first finite band gap of the lattice spectrum. The respective critical value g{sub c} again slowly decreases with the increase of V{sub 0}, corresponding to N{sub max}{approx_equal}5000.

  2. High speed miniature motorized endoscopic probe for 3D optical frequency domain imaging

    NASA Astrophysics Data System (ADS)

    Li, Jianan; Feroldi, Fabio; Mo, Jianhua; Helderman, Frank; de Groot, Mattijs; de Boer, Johannes F.

    2013-03-01

    We present a miniature motorized endoscopic probe for Optical Frequency Domain Imaging with an outer diameter of 1.65 mm and a rotation speed of 3,000 - 12,500 rpm. This is the smallest motorized high speed OCT probe to our knowledge. The probe has a motorized distal end which provides a significant advantage over proximally driven probes since it does not require a drive shaft to transfer the rotational torque to the distal end of the probe and functions without a fiber rotary junction. The probe has a focal Full Width at Half Maximum of 9.6 μm and a working distance of 0.47 mm. We analyzed the non-uniform rotation distortion and found a location fluctuation of only 1.87° in repeated measurements of the same object. The probe was integrated in a high-speed Optical Frequency Domain Imaging setup at 1310 nm We demonstrated its performance with imaging ex vivo pig bronchial and in vivo goat lung.

  3. Fabrication of fully undercut ZnO-based photonic crystal membranes with 3D optical confinement

    NASA Astrophysics Data System (ADS)

    Hoffmann, Sandro Phil; Albert, Maximilian; Meier, Cedrik

    2016-09-01

    For studying nonlinear photonics, a highly controllable emission of photons with specific properties is essential. Two-dimensional photonic crystals (PhCs) have proven to be an excellent candidate for manipulating photon emission due to resonator-based effects. Additionally, zinc oxide (ZnO) has high susceptibility coefficients and therefore shows pronounced nonlinear effects. However, in order to fabricate such a cavity, a fully undercut ZnO membrane is required, which is a challenging problem due to poor selectivity of the known etching chemistry for typical substrates such as sapphire or ZnO. The aim of this paper is to demonstrate and characterize fully undercut photonic crystal membranes based on a thin ZnO film sandwiched between two layers of silicon dioxide (SiO2) on silicon substrates, from the initial growth of the heterostructure throughout the entire fabrication process. This process leads to a fully undercut ZnO-based membrane with adjustable optical confinement in all three dimensions. Finally, photonic resonances within the tailored photonic band gap are achieved due to optimized PhC-design (in-plane) and total internal reflection in the z-direction. The presented approach enables a variety of photon based resonator structures in the UV regime for studying nonlinear effects, including photon-exciton coupling and all-optical switching.

  4. Phase-retrieved optical projection tomography for 3D imaging through scattering layers

    NASA Astrophysics Data System (ADS)

    Ancora, Daniele; Di Battista, Diego; Giasafaki, Georgia; Psycharakis, Stylianos; Liapis, Evangelos; Zacharopoulos, Athanasios; Zacharakis, Giannis

    2016-03-01

    Recently great progress has been made in biological and biomedical imaging by combining non-invasive optical methods, novel adaptive light manipulation and computational techniques for intensity-based phase recovery and three dimensional image reconstruction. In particular and in relation to the work presented here, Optical Projection Tomography (OPT) is a well-established technique for imaging mostly transparent absorbing biological models such as C. Elegans and Danio Rerio. On the contrary, scattering layers like the cocoon surrounding the Drosophila during the pupae stage constitutes a challenge for three dimensional imaging through such a complex structure. However, recent studies enabled image reconstruction through scattering curtains up to few transport mean free paths via phase retrieval iterative algorithms allowing to uncover objects hidden behind complex layers. By combining these two techniques we explore the possibility to perform a three dimensional image reconstruction of fluorescent objects embedded between scattering layers without compromising its structural integrity. Dynamical cross correlation registration was implemented for the registration process due to translational and flipping ambiguity of the phase retrieval problem, in order to provide the correct aligned set of data to perform the back-projection reconstruction. We have thus managed to reconstruct a hidden complex object between static scattering curtains and compared with the effective reconstruction to fully understand the process before the in-vivo biological implementation.

  5. Dimensionality Reduction Based Optimization Algorithm for Sparse 3-D Image Reconstruction in Diffuse Optical Tomography

    NASA Astrophysics Data System (ADS)

    Bhowmik, Tanmoy; Liu, Hanli; Ye, Zhou; Oraintara, Soontorn

    2016-03-01

    Diffuse optical tomography (DOT) is a relatively low cost and portable imaging modality for reconstruction of optical properties in a highly scattering medium, such as human tissue. The inverse problem in DOT is highly ill-posed, making reconstruction of high-quality image a critical challenge. Because of the nature of sparsity in DOT, sparsity regularization has been utilized to achieve high-quality DOT reconstruction. However, conventional approaches using sparse optimization are computationally expensive and have no selection criteria to optimize the regularization parameter. In this paper, a novel algorithm, Dimensionality Reduction based Optimization for DOT (DRO-DOT), is proposed. It reduces the dimensionality of the inverse DOT problem by reducing the number of unknowns in two steps and thereby makes the overall process fast. First, it constructs a low resolution voxel basis based on the sensing-matrix properties to find an image support. Second, it reconstructs the sparse image inside this support. To compensate for the reduced sensitivity with increasing depth, depth compensation is incorporated in DRO-DOT. An efficient method to optimally select the regularization parameter is proposed for obtaining a high-quality DOT image. DRO-DOT is also able to reconstruct high-resolution images even with a limited number of optodes in a spatially limited imaging set-up.

  6. Dimensionality Reduction Based Optimization Algorithm for Sparse 3-D Image Reconstruction in Diffuse Optical Tomography

    PubMed Central

    Bhowmik, Tanmoy; Liu, Hanli; Ye, Zhou; Oraintara, Soontorn

    2016-01-01

    Diffuse optical tomography (DOT) is a relatively low cost and portable imaging modality for reconstruction of optical properties in a highly scattering medium, such as human tissue. The inverse problem in DOT is highly ill-posed, making reconstruction of high-quality image a critical challenge. Because of the nature of sparsity in DOT, sparsity regularization has been utilized to achieve high-quality DOT reconstruction. However, conventional approaches using sparse optimization are computationally expensive and have no selection criteria to optimize the regularization parameter. In this paper, a novel algorithm, Dimensionality Reduction based Optimization for DOT (DRO-DOT), is proposed. It reduces the dimensionality of the inverse DOT problem by reducing the number of unknowns in two steps and thereby makes the overall process fast. First, it constructs a low resolution voxel basis based on the sensing-matrix properties to find an image support. Second, it reconstructs the sparse image inside this support. To compensate for the reduced sensitivity with increasing depth, depth compensation is incorporated in DRO-DOT. An efficient method to optimally select the regularization parameter is proposed for obtaining a high-quality DOT image. DRO-DOT is also able to reconstruct high-resolution images even with a limited number of optodes in a spatially limited imaging set-up. PMID:26940661

  7. Optical phase conjugation assisted scattering lens: variable focusing and 3D patterning

    PubMed Central

    Ryu, Jihee; Jang, Mooseok; Eom, Tae Joong; Yang, Changhuei; Chung, Euiheon

    2016-01-01

    Variable light focusing is the ability to flexibly select the focal distance of a lens. This feature presents technical challenges, but is significant for optical interrogation of three-dimensional objects. Numerous lens designs have been proposed to provide flexible light focusing, including zoom, fluid, and liquid-crystal lenses. Although these lenses are useful for macroscale applications, they have limited utility in micron-scale applications due to restricted modulation range and exacting requirements for fabrication and control. Here, we present a holographic focusing method that enables variable light focusing without any physical modification to the lens element. In this method, a scattering layer couples low-angle (transverse wave vector) components into a full angular spectrum, and a digital optical phase conjugation (DOPC) system characterizes and plays back the wavefront that focuses through the scattering layer. We demonstrate micron-scale light focusing and patterning over a wide range of focal distances of 22–51 mm. The interferometric nature of the focusing scheme also enables an aberration-free scattering lens. The proposed method provides a unique variable focusing capability for imaging thick specimens or selective photoactivation of neuronal networks. PMID:27049442

  8. Optical phase conjugation assisted scattering lens: variable focusing and 3D patterning

    NASA Astrophysics Data System (ADS)

    Ryu, Jihee; Jang, Mooseok; Eom, Tae Joong; Yang, Changhuei; Chung, Euiheon

    2016-04-01

    Variable light focusing is the ability to flexibly select the focal distance of a lens. This feature presents technical challenges, but is significant for optical interrogation of three-dimensional objects. Numerous lens designs have been proposed to provide flexible light focusing, including zoom, fluid, and liquid-crystal lenses. Although these lenses are useful for macroscale applications, they have limited utility in micron-scale applications due to restricted modulation range and exacting requirements for fabrication and control. Here, we present a holographic focusing method that enables variable light focusing without any physical modification to the lens element. In this method, a scattering layer couples low-angle (transverse wave vector) components into a full angular spectrum, and a digital optical phase conjugation (DOPC) system characterizes and plays back the wavefront that focuses through the scattering layer. We demonstrate micron-scale light focusing and patterning over a wide range of focal distances of 22–51 mm. The interferometric nature of the focusing scheme also enables an aberration-free scattering lens. The proposed method provides a unique variable focusing capability for imaging thick specimens or selective photoactivation of neuronal networks.

  9. Laser electro-optic system for rapid three-dimensional /3-D/ topographic mapping of surfaces

    NASA Technical Reports Server (NTRS)

    Altschuler, M. D.; Altschuler, B. R.; Taboada, J.

    1981-01-01

    It is pointed out that the generic utility of a robot in a factory/assembly environment could be substantially enhanced by providing a vision capability to the robot. A standard videocamera for robot vision provides a two-dimensional image which contains insufficient information for a detailed three-dimensional reconstruction of an object. Approaches which supply the additional information needed for the three-dimensional mapping of objects with complex surface shapes are briefly considered and a description is presented of a laser-based system which can provide three-dimensional vision to a robot. The system consists of a laser beam array generator, an optical image recorder, and software for controlling the required operations. The projection of a laser beam array onto a surface produces a dot pattern image which is viewed from one or more suitable perspectives. Attention is given to the mathematical method employed, the space coding technique, the approaches used for obtaining the transformation parameters, the optics for laser beam array generation, the hardware for beam array coding, and aspects of image acquisition.

  10. Study of 3D remote sensing system based on optical scanning holography

    NASA Astrophysics Data System (ADS)

    Zhao, Shihu; Yan, Lei

    2009-06-01

    High-precision and real-time remote sensing imaging system is an important part of remote sensing development. Holography is a method of wave front record and recovery which was presented by Dennis Gabor. As a new kind of holography techniques, Optical scanning holography (OSH) and remote sensing imaging are intended to be combined together and applied in acquisition and interference measurement of remote sensing. The key principles and applicability of OSH are studied and the mathematic relation between Fresnel Zone Plate number, numerical aperture and object distance was deduced, which are proved to be feasible for OSH to apply in large scale remote sensing. At last, a new three-dimensional reflected OSH remote sensing imaging system is designed with the combination of scanning technique to record hologram patterns of large scale remote sensing scenes. This scheme is helpful for expanding OSH technique to remote sensing in future.

  11. Recent advances in dental optics - Part I: 3D intraoral scanners for restorative dentistry

    NASA Astrophysics Data System (ADS)

    Logozzo, Silvia; Zanetti, Elisabetta M.; Franceschini, Giordano; Kilpelä, Ari; Mäkynen, Anssi

    2014-03-01

    Intra-oral scanning technology is a very fast-growing field in dentistry since it responds to the need of an accurate three-dimensional mapping of the mouth, as required in a large number of procedures such as restorative dentistry and orthodontics. Nowadays, more than 10 intra-oral scanning devices for restorative dentistry have been developed all over the world even if only some of those devices are currently available on the market. All the existing intraoral scanners try to face with problems and disadvantages of traditional impression fabrication process and are based on different non-contact optical technologies and principles. The aim of this publication is to provide an extensive review of existing intraoral scanners for restorative dentistry evaluating their working principles, features and performances.

  12. Intensifying the response of distributed optical fibre sensors using 2D and 3D image restoration

    PubMed Central

    Soto, Marcelo A.; Ramírez, Jaime A.; Thévenaz, Luc

    2016-01-01

    Distributed optical fibre sensors possess the unique capability of measuring the spatial and temporal map of environmental quantities that can be of great interest for several field applications. Although existing methods for performance enhancement have enabled important progresses in the field, they do not take full advantage of all information present in the measured data, still giving room for substantial improvement over the state-of-the-art. Here we propose and experimentally demonstrate an approach for performance enhancement that exploits the high level of similitude and redundancy contained on the multidimensional information measured by distributed fibre sensors. Exploiting conventional image and video processing, an unprecedented boost in signal-to-noise ratio and measurement contrast is experimentally demonstrated. The method can be applied to any white-noise-limited distributed fibre sensor and can remarkably provide a 100-fold improvement in the sensor performance with no hardware modification. PMID:26927698

  13. Intensifying the response of distributed optical fibre sensors using 2D and 3D image restoration

    NASA Astrophysics Data System (ADS)

    Soto, Marcelo A.; Ramírez, Jaime A.; Thévenaz, Luc

    2016-03-01

    Distributed optical fibre sensors possess the unique capability of measuring the spatial and temporal map of environmental quantities that can be of great interest for several field applications. Although existing methods for performance enhancement have enabled important progresses in the field, they do not take full advantage of all information present in the measured data, still giving room for substantial improvement over the state-of-the-art. Here we propose and experimentally demonstrate an approach for performance enhancement that exploits the high level of similitude and redundancy contained on the multidimensional information measured by distributed fibre sensors. Exploiting conventional image and video processing, an unprecedented boost in signal-to-noise ratio and measurement contrast is experimentally demonstrated. The method can be applied to any white-noise-limited distributed fibre sensor and can remarkably provide a 100-fold improvement in the sensor performance with no hardware modification.

  14. Dynamical phase diagram of Gaussian wave packets in optical lattices

    NASA Astrophysics Data System (ADS)

    Hennig, H.; Neff, T.; Fleischmann, R.

    2016-03-01

    We study the dynamics of self-trapping in Bose-Einstein condensates (BECs) loaded in deep optical lattices with Gaussian initial conditions, when the dynamics is well described by the discrete nonlinear Schrödinger equation (DNLSE). In the literature an approximate dynamical phase diagram based on a variational approach was introduced to distinguish different dynamical regimes: diffusion, self-trapping, and moving breathers. However, we find that the actual DNLSE dynamics shows a completely different diagram than the variational prediction. We calculate numerically a detailed dynamical phase diagram accurately describing the different dynamical regimes. It exhibits a complex structure that can readily be tested in current experiments in BECs in optical lattices and in optical waveguide arrays. Moreover, we derive an explicit theoretical estimate for the transition to self-trapping in excellent agreement with our numerical findings, which may be a valuable guide as well for future studies on a quantum dynamical phase diagram based on the Bose-Hubbard Hamiltonian.

  15. Optical non-invasive 3D characterization of pottery of pre-colonial Paranaiba valley tribes

    NASA Astrophysics Data System (ADS)

    Magalhães, Wagner; Alves, Márcia Angelina; Costa, Manuel F.

    2014-08-01

    Optical non-invasive inspection tools and methods had expensively proven, for several decades now, their invaluable importance in the preservation of cultural heritage and artwork. In this paper we will report on an optical non-invasive microtopographic characterization work on pre-historical and pre-colonial ceramics and pottery of tribes in the Paranaiba valley in Minas Gerais, Brazil. The samples object of this work were collected at the Inhazinha archeological site (19º 10'00" S / 47° 11'00" W) in the vicinity of Perdizes municipality in transition between the West mining area and the "triangle" area in the center of Brazil. It is a hilly region (850m high) traversed by a number of rivers and streams tributary of Araguari river like Quebra Anzol river and Macaúba and Olegário streams. The Inhazinha site' excavations are part of the Project Jigsaw Hook which since 1980 aimed the establishment of a chrono-cultural framework associated with the study of the socio-cultural dynamics corresponding to successive occupations of hunter-recollector-farmer' tribes in prehistoric and pre-colonial times in the Paranaíba valley in Minas Gerais, Brazil. Two groups of indigenous Indian occupations were found. Both of the pre-colonial period dated at 1,095 ± 186 years ago (TL-FATEC/SP for Zone 1) and of the early nineteenth century dated at 212 ± 19 years ago (EMS-CENA-USP/SP) and 190 ± 30 years ago (C14- BETA/USA) in Zone 2 seemingly occupied by southern Kayapós tribes. The pottery found is decorated with incisions with different geometric distributions and levels of complexity.

  16. Forward-viewing resonant fiber-optic scanning endoscope of appropriate scanning speed for 3D OCT imaging

    PubMed Central

    Huo, Li; Xi, Jiefeng; Wu, Yicong; Li, Xingde

    2010-01-01

    A forward-viewing resonant fiber-optic endoscope of a scanning speed appropriate for a high-speed Fourier-domain optical coherence tomography (FD-OCT) system was developed to enable real-time, three-dimensional endoscopic OCT imaging. A new method was explored to conveniently tune the scanning frequency of a resonant fiber-optic scanner, by properly selecting the fiber-optic cantilever length, partially changing the mechanical property of the cantilever, and adding a weight to the cantilever tip. Systematic analyses indicated the resonant scanning frequency can be tuned over two orders of magnitude spanning from ~10Hz to ~kHz. Such a flexible scanning frequency range makes it possible to set an appropriate scanning speed of the endoscope to match the different A-scan rates of a variety of FD-OCT systems. A 2.4-mm diameter, 62.5-Hz scanning endoscope appropriate to work with a 40-kHz swept-source OCT (SS-OCT) system was developed and demonstrated for 3D OCT imaging of biological tissues. PMID:20639922

  17. Toward acquiring comprehensive radiosurgery field commissioning data using the PRESAGE®/ optical-CT 3D dosimetry system

    NASA Astrophysics Data System (ADS)

    Clift, Corey; Thomas, Andrew; Adamovics, John; Chang, Zheng; Das, Indra; Oldham, Mark

    2010-03-01

    Achieving accurate small field dosimetry is challenging. This study investigates the utility of a radiochromic plastic PRESAGE® read with optical-CT for the acquisition of radiosurgery field commissioning data from a Novalis Tx system with a high-definition multileaf collimator (HDMLC). Total scatter factors (Sc, p), beam profiles, and penumbrae were measured for five different radiosurgery fields (5, 10, 20, 30 and 40 mm) using a commercially available optical-CT scanner (OCTOPUS, MGS Research). The percent depth dose (PDD), beam profile and penumbra of the 10 mm field were also measured using a higher resolution in-house prototype CCD-based scanner. Gafchromic EBT® film was used for independent verification. Measurements of Sc, p made with PRESAGE® and film agreed with mini-ion chamber commissioning data to within 4% for every field (range 0.2-3.6% for PRESAGE®, and 1.6-3.6% for EBT). PDD, beam profile and penumbra measurements made with the two PRESAGE®/optical-CT systems and film showed good agreement with the high-resolution diode commissioning measurements with a competitive resolution (0.5 mm pixels). The in-house prototype optical-CT scanner allowed much finer resolution compared with previous applications of PRESAGE®. The advantages of the PRESAGE® system for small field dosimetry include 3D measurements, negligible volume averaging, directional insensitivity, an absence of beam perturbations, energy and dose rate independence.

  18. High-resolution 3-D imaging of surface damage sites in fused silica with Optical Coherence Tomography

    SciTech Connect

    Guss, G; Bass, I; Hackel, R; Mailhiot, C; Demos, S G

    2007-10-30

    In this work, we present the first successful demonstration of a non-contact technique to precisely measure the 3D spatial characteristics of laser induced surface damage sites in fused silica for large aperture laser systems by employing Optical Coherence Tomography (OCT). What makes OCT particularly interesting in the characterization of optical materials for large aperture laser systems is that its axial resolution can be maintained with working distances greater than 5 cm, whether viewing through air or through the bulk of thick optics. Specifically, when mitigating surface damage sites against further growth by CO{sub 2} laser evaporation of the damage, it is important to know the depth of subsurface cracks below the damage site. These cracks are typically obscured by the damage rubble when imaged from above the surface. The results to date clearly demonstrate that OCT is a unique and valuable tool for characterizing damage sites before and after the mitigation process. We also demonstrated its utility as an in-situ diagnostic to guide and optimize our process when mitigating surface damage sites on large, high-value optics.

  19. Role of transverse excitations in the instability of Bose-Einstein condensates moving in optical lattices

    SciTech Connect

    Modugno, M.; Tozzo, C.; Dalfovo, F.

    2004-10-01

    The occurrence of energetic and dynamical instabilities in a Bose-Einstein condensate moving in a one-dimensional (1D) optical lattice is analyzed by means of the Gross-Pitaevskii theory. Results of full 3D calculations are compared with those of an effective 1D model, the nonpolynomial Schroedinger equation, pointing out the role played by transverse degrees of freedom. The instability thresholds are shown to be scarcely affected by transverse excitations, so that they can be accurately predicted by effective 1D models. Conversely, transverse excitations turn out to be important in characterizing the stability diagram and the occurrence of a complex radial dynamics above the threshold for dynamical instability. This analysis provides a realistic framework to discuss the dissipative dynamics observed in recent experiments.

  20. Proposals for quantum simulating simple lattice gauge theory models using optical lattices

    NASA Astrophysics Data System (ADS)

    Zhang, Jin; Unmuth-Yockey, Judah; Bazavov, Alexei; Meurice, Yannick; Tsai, Shan-Wen

    We derive an effective spin Hamiltonian for the (1 +1)-dimensional Abelian Higgs model in the strongly coupled region by integrating out the link variables. With finite spin truncations, the Hamiltonian can be matched with a 1-dimensional two-species Bose Hubbard model in the strong-coupling limit that can be implemented with cold atoms on an optical lattice. We study the phase diagram of the original Abelian Higgs model with Monte Carlo simulation and Tensor Renormalization Group methods. The results show a crossover line which terminates near the Kosterlitz-Thouless transition point. The effective quantum Hamiltonian is also studied with the DMRG method, and we find that they have a similar behavior. We discuss practical experimental implementations for our quantum simulator. Species-dependent optical lattices and ladder systems with double-well potentials are considered. We show how to obtain each of the interaction parameters required in the Bose-Hubbard model that we obtained, and confirm the possibility of tuning these interactions to the region in which our mapping is valid. We emphasize that this proposal for quantum simulating a gauge theory uses a manifestly gauge-invariant formulation and Gauss's Law is therefore automatically satisfied. Supported by DoD ARO under Grant No. W911NF-13-1-0119 and by the NSF under Grants No. DMR-1411345.

  1. Fast 3D in vivo swept-source optical coherence tomography using a two-axis MEMS scanning micromirror

    NASA Astrophysics Data System (ADS)

    Kumar, Karthik; Condit, Jonathan C.; McElroy, Austin; Kemp, Nate J.; Hoshino, Kazunori; Milner, Thomas E.; Zhang, Xiaojing

    2008-04-01

    We report on a fibre-based forward-imaging swept-source optical coherence tomography system using a high-reflectivity two-axis microelectromechanical scanning mirror for high-speed 3D in vivo visualization of cellular-scale architecture of biological specimens. The scanning micromirrors, based on electrostatic staggered vertical comb drive actuators, can provide ± 9° of optical deflection on both rotation axes and uniform reflectivity of greater than 90% over the range of imaging wavelengths (1260-1360 nm), allowing for imaging turbid samples with good signal-to-noise ratio. The wavelength-swept laser, scanning over 100 nm spectrum at 20 kHz rate, enables fast image acquisition at 10.2 million voxels s-1 (for 3D imaging) or 40 frames s-1 (for 2D imaging with 500 transverse pixels per image) with 8.6 µm axial resolution. Lateral resolution of 12.5 µm over 3 mm field of view in each lateral direction is obtained using ZEMAX optical simulations for the lateral beam scanning system across the scanning angle range of the 500 µm × 700 µm micromirror. We successfully acquired en face and tomographic images of rigid structures (scanning micromirror), in vitro biological samples (onion peels and pickle slices) and in vivo images of human epidermis over 2 × 1 × 4 mm3 imaging volume in real time at faster-than-video 2D frame rates. The results indicate that our system framework may be suitable for image-guided minimally invasive examination of various diseased tissues.

  2. Stable Fulde-Ferrell-Larkin-Ovchinnikov pairing states in two-dimensional and three-dimensional optical lattices

    SciTech Connect

    Cai Zi; Wu Congjun; Wang Yupeng

    2011-06-15

    We present the study of the Fulde-Ferrell-Larkin-Ovchinnikov (FFLO) pairing states in the p-orbital bands in both two- and three-dimensional optical lattices. Due to the quasi-one-dimensional band structure which arises from the unidirectional hopping of the orthogonal p orbitals, the pairing phase space is not affected by spin imbalance. Furthermore, interactions build up high-dimensional phase coherence which stabilizes the FFLO states in 2D and 3D optical lattices in a large parameter regime in the phase diagram. These FFLO phases are stable with the imposition of the inhomogeneous trapping potential. Their entropies are comparable to the normal states at finite temperatures.

  3. Investigating Cold Atom Transport in Optical Lattices and Ratchets

    NASA Astrophysics Data System (ADS)

    Zhong, Shan; Clements, Ethan; Pollock, Zach; Rapp, Anthony; Ross, Preston; Hachtel, Andrew; Bali, Samir

    2015-05-01

    We experimentally investigate cold atom transport in optical lattices and ratchets in an undergraduate setting using home-built laser and imaging systems. It is well-known that the transport properties exhibited in these situations by ultracold atoms depart from the usual framework of Boltzmann-Gibbs statistical mechanics. We describe methods to quantify these departures by tracking the atomic momentum and spatial distribution, and measuring the ``dwell time'' and ``crossover time,'' respectively, in a particular well and between wells. We gratefully acknowledge funding from Miami University Physics Department.

  4. Floquet engineering with quasienergy bands of periodically driven optical lattices

    NASA Astrophysics Data System (ADS)

    Holthaus, Martin

    2016-01-01

    A primer on the Floquet theory of periodically time-dependent quantum systems is provided, and it is shown how to apply this framework for computing the quasienergy band structure governing the dynamics of ultracold atoms in driven optical cosine lattices. Such systems are viewed here as spatially and temporally periodic structures living in an extended Hilbert space, giving rise to spatio-temporal Bloch waves whose dispersion relations can be manipulated at will by exploiting ac-Stark shifts and multiphoton resonances. The elements required for numerical calculations are introduced in a tutorial manner, and some example calculations are discussed in detail, thereby illustrating future prospects of Floquet engineering.

  5. Dynamics of Weyl quasiparticles in an optical lattice

    NASA Astrophysics Data System (ADS)

    Li, Zhi; Wang, Huai-Qiang; Zhang, Dan-Wei; Zhu, Shi-Liang; Xing, Ding-Yu

    2016-10-01

    We investigate the dynamics of the Weyl quasiparticles emerged in an optical lattice where the topological Weyl semimetal and trivial band insulator phases can be adjusted with the on-site energy. The evolution of the density distribution is demonstrated to have an anomalous velocity in the Weyl semimetal but a steady Zitterbewegung effect in the band insulator. Our analysis demonstrates that the chirality of the system can be directly determined from the positions of the atomic center of mass. Furthermore, the amplitude and the period of the relativistic Zitterbewegung oscillations are shown to be observable with the time-of-flight experiments.

  6. Defect-mediated discrete solitons in optically induced photorefractive lattices

    SciTech Connect

    Li Yongyao; Pang Wei; Chen Yongzhu; Yu Zhiqiang; Zhou Jianying; Zhang Huarong

    2009-10-15

    Theoretical analysis to the defect mediated discrete solitons in one- and two-dimensional periodical waveguide lattices is presented. The waveguide arrays with these functional defects are assumed to respond to the light field as an optically induced photorefraction and they are patterned by a holographic technique. It is found that the spatial energy distributions of the solitary waves can be controlled by the defects in the waveguide arrays, and this gives rise to an additional freedom to externally shaping the light field distribution to a special shape.

  7. Algorithms for improved 3-D reconstruction of live mammalian embryo vasculature from optical coherence tomography data

    PubMed Central

    Kulkarni, Prathamesh M.; Rey-Villamizar, Nicolas; Merouane, Amine; Sudheendran, Narendran; Wang, Shang; Garcia, Monica; Larina, Irina V.; Roysam, Badrinath

    2015-01-01

    Background Robust reconstructions of the three-dimensional network of blood vessels in developing embryos imaged by optical coherence tomography (OCT) are needed for quantifying the longitudinal development of vascular networks in live mammalian embryos, in support of developmental cardiovascular research. Past computational methods [such as speckle variance (SV)] have demonstrated the feasibility of vascular reconstruction, but multiple challenges remain including: the presence of vessel structures at multiple spatial scales, thin blood vessels with weak flow, and artifacts resulting from bulk tissue motion (BTM). Methods In order to overcome these challenges, this paper introduces a robust and scalable reconstruction algorithm based on a combination of anomaly detection algorithms and a parametric dictionary based sparse representation of blood vessels from structural OCT data. Results Validation results using confocal data as the baseline demonstrate that the proposed method enables the detection of vessel segments that are either partially missed or weakly reconstructed using the SV method. Finally, quantitative measurements of vessel reconstruction quality indicate an overall higher quality of vessel reconstruction with the proposed method. Conclusions Results suggest that sparsity-integrated speckle anomaly detection (SSAD) is potentially a valuable tool for performing accurate quantification of the progression of vascular development in the mammalian embryonic yolk sac as imaged using OCT. PMID:25694962

  8. 3D printed broadband transformation optics based all-dielectric microwave lenses

    NASA Astrophysics Data System (ADS)

    Yi, Jianjia; Nawaz Burokur, Shah; Piau, Gérard-Pascal; de Lustrac, André

    2016-04-01

    Quasi-conformal transformation optics is applied to design electromagnetic devices for focusing and collimating applications at microwave frequencies. Two devices are studied and conceived by solving Laplace’s equation that describes the deformation of a medium in a space transformation. As validation examples, material parameters of two different lenses are derived from the analytical solutions of Laplace’s equation. The first lens is applied to produce an overall directive in-phase emission from an array of sources conformed on a cylindrical structure. The second lens allows deflecting a directive beam to an off-normal direction. Full-wave simulations are performed to verify the functionality of the calculated lenses. Prototypes presenting a graded refractive index are fabricated through three-dimensional polyjet printing using solely dielectric materials. Experimental measurements carried out show very good agreement with numerical simulations, thereby validating the proposed lenses. Such easily realizable designs open the way to low-cost all-dielectric microwave lenses for beam forming and collimation.

  9. 3D optical imagery for motion compensation in a limb ultrasound system

    NASA Astrophysics Data System (ADS)

    Ranger, Bryan J.; Feigin, Micha; Zhang, Xiang; Mireault, Al; Raskar, Ramesh; Herr, Hugh M.; Anthony, Brian W.

    2016-04-01

    Conventional processes for prosthetic socket fabrication are heavily subjective, often resulting in an interface to the human body that is neither comfortable nor completely functional. With nearly 100% of amputees reporting that they experience discomfort with the wearing of their prosthetic limb, designing an effective interface to the body can significantly affect quality of life and future health outcomes. Active research in medical imaging and biomechanical tissue modeling of residual limbs has led to significant advances in computer aided prosthetic socket design, demonstrating an interest in moving toward more quantifiable processes that are still patient-specific. In our work, medical ultrasonography is being pursued to acquire data that may quantify and improve the design process and fabrication of prosthetic sockets while greatly reducing cost compared to an MRI-based framework. This paper presents a prototype limb imaging system that uses a medical ultrasound probe, mounted to a mechanical positioning system and submerged in a water bath. The limb imaging is combined with three-dimensional optical imaging for motion compensation. Images are collected circumferentially around the limb and combined into cross-sectional axial image slices, resulting in a compound image that shows tissue distributions and anatomical boundaries similar to magnetic resonance imaging. In this paper we provide a progress update on our system development, along with preliminary results as we move toward full volumetric imaging of residual limbs for prosthetic socket design. This demonstrates a novel multi-modal approach to residual limb imaging.

  10. Artificial staggered magnetic field for ultracold atoms in optical lattices

    SciTech Connect

    Lim, Lih-King; Smith, C. Morais; Hemmerich, Andreas

    2010-02-15

    A time-dependent optical lattice with staggered particle current in the tight-binding regime was considered that can be described by a time-independent effective lattice model with an artificial staggered magnetic field. The low-energy description of a single-component fermion in this lattice at half-filling is provided by two copies of ideal two-dimensional massless Dirac fermions. The Dirac cones are generally anisotropic and can be tuned by the external staggered flux {phi}. For bosons, the staggered flux modifies the single-particle spectrum such that in the weak coupling limit, depending on the flux {phi}, distinct superfluid phases are realized. Their properties are discussed, the nature of the phase transitions between them is established, and Bogoliubov theory is used to determine their excitation spectra. Then the generalized superfluid-Mott-insulator transition is studied in the presence of the staggered flux and the complete phase diagram is established. Finally, the momentum distribution of the distinct superfluid phases is obtained, which provides a clear experimental signature of each phase in ballistic expansion experiments.

  11. 3D registration of intravascular optical coherence tomography and cryo-image volumes for microscopic-resolution validation

    NASA Astrophysics Data System (ADS)

    Prabhu, David; Mehanna, Emile; Gargesha, Madhusudhana; Wen, Di; Brandt, Eric; van Ditzhuijzen, Nienke S.; Chamie, Daniel; Yamamoto, Hirosada; Fujino, Yusuke; Farmazilian, Ali; Patel, Jaymin; Costa, Marco; Bezerra, Hiram G.; Wilson, David L.

    2016-03-01

    High resolution, 100 frames/sec intravascular optical coherence tomography (IVOCT) can distinguish plaque types, but further validation is needed, especially for automated plaque characterization. We developed experimental and 3D registration methods, to provide validation of IVOCT pullback volumes using microscopic, brightfield and fluorescent cryoimage volumes, with optional, exactly registered cryo-histology. The innovation was a method to match an IVOCT pullback images, acquired in the catheter reference frame, to a true 3D cryo-image volume. Briefly, an 11-parameter, polynomial virtual catheter was initialized within the cryo-image volume, and perpendicular images were extracted, mimicking IVOCT image acquisition. Virtual catheter parameters were optimized to maximize cryo and IVOCT lumen overlap. Local minima were possible, but when we started within reasonable ranges, every one of 24 digital phantom cases converged to a good solution with a registration error of only +1.34+/-2.65μm (signed distance). Registration was applied to 10 ex-vivo cadaver coronary arteries (LADs), resulting in 10 registered cryo and IVOCT volumes yielding a total of 421 registered 2D-image pairs. Image overlays demonstrated high continuity between vascular and plaque features. Bland- Altman analysis comparing cryo and IVOCT lumen area, showed mean and standard deviation of differences as 0.01+/-0.43 mm2. DICE coefficients were 0.91+/-0.04. Finally, visual assessment on 20 representative cases with easily identifiable features suggested registration accuracy within one frame of IVOCT (+/-200μm), eliminating significant misinterpretations introduced by 1mm errors in the literature. The method will provide 3D data for training of IVOCT plaque algorithms and can be used for validation of other intravascular imaging modalities.

  12. An analogue contact probe using a compact 3D optical sensor for micro/nano coordinate measuring machines

    NASA Astrophysics Data System (ADS)

    Li, Rui-Jun; Fan, Kuang-Chao; Miao, Jin-Wei; Huang, Qiang-Xian; Tao, Sheng; Gong, Er-min

    2014-09-01

    This paper presents a new analogue contact probe based on a compact 3D optical sensor with high precision. The sensor comprises an autocollimator and a polarizing Michelson interferometer, which can detect two angles and one displacement of the plane mirror at the same time. In this probe system, a tungsten stylus with a ruby tip-ball is attached to a floating plate, which is supported by four V-shape leaf springs fixed to the outer case. When a contact force is applied to the tip, the leaf springs will experience elastic deformation and the plane mirror mounted on the floating plate will be displaced. The force-motion characteristics of this probe were investigated and optimum parameters were obtained with the constraint of allowable physical size of the probe. Simulation results show that the probe is uniform in 3D and its contacting force gradient is within 1 mN µm - 1. Experimental results indicate that the probe has 1 nm resolution,  ± 10 µm measuring range in X - Y plane, 10 µm measuring range in Z direction and within 30 nm measuring standard deviation. The feasibility of the probe has been preliminarily verified by testing the flatness and step height of high precision gauge blocks.

  13. Accurate and automated image segmentation of 3D optical coherence tomography data suffering from low signal-to-noise levels.

    PubMed

    Su, Rong; Ekberg, Peter; Leitner, Michael; Mattsson, Lars

    2014-12-01

    Optical coherence tomography (OCT) has proven to be a useful tool for investigating internal structures in ceramic tapes, and the technique is expected to be important for roll-to-roll manufacturing. However, because of high scattering in ceramic materials, noise and speckles deteriorate the image quality, which makes automated quantitative measurements of internal interfaces difficult. To overcome this difficulty we present in this paper an innovative image analysis approach based on volumetric OCT data. The engine in the analysis is a 3D image processing and analysis algorithm. It is dedicated to boundary segmentation and dimensional measurement in volumetric OCT images, and offers high accuracy, efficiency, robustness, subpixel resolution, and a fully automated operation. The method relies on the correlation property of a physical interface and effectively eliminates pixels caused by noise and speckles. The remaining pixels being stored are the ones confirmed to be related to the target interfaces. Segmentation of tilted and curved internal interfaces separated by ∼10  μm in the Z direction is demonstrated. The algorithm also extracts full-field top-view intensity maps of the target interfaces for high-accuracy measurements in the X and Y directions. The methodology developed here may also be adopted in other similar 3D imaging and measurement technologies, e.g., ultrasound imaging, and for various materials. PMID:25606743

  14. Observation of optical solitons in PT-symmetric lattices

    NASA Astrophysics Data System (ADS)

    Wimmer, Martin; Regensburger, Alois; Miri, Mohammad-Ali; Bersch, Christoph; Christodoulides, Demetrios N.; Peschel, Ulf

    2015-07-01

    Controlling light transport in nonlinear active environments is a topic of considerable interest in the field of optics. In such complex arrangements, of particular importance is to devise strategies to subdue chaotic behaviour even in the presence of gain/loss and nonlinearity, which often assume adversarial roles. Quite recently, notions of parity-time (PT) symmetry have been suggested in photonic settings as a means to enforce stable energy flow in platforms that simultaneously employ both amplification and attenuation. Here we report the experimental observation of optical solitons in PT-symmetric lattices. Unlike other non-conservative nonlinear arrangements where self-trapped states appear as fixed points in the parameter space of the governing equations, discrete PT solitons form a continuous parametric family of solutions. The possibility of synthesizing PT-symmetric saturable absorbers, where a nonlinear wave finds a lossless path through an otherwise absorptive system is also demonstrated.

  15. Accurate Optical Lattice Clock with {sup 87}Sr Atoms

    SciTech Connect

    Le Targat, Rodolphe; Baillard, Xavier; Fouche, Mathilde; Brusch, Anders; Tcherbakoff, Olivier; Rovera, Giovanni D.; Lemonde, Pierre

    2006-09-29

    We report a frequency measurement of the {sup 1}S{sub 0}-{sup 3}P{sub 0} transition of {sup 87}Sr atoms in an optical lattice clock. The frequency is determined to be 429 228 004 229 879(5) Hz with a fractional uncertainty that is comparable to state-of-the-art optical clocks with neutral atoms in free fall. The two previous measurements of this transition were found to disagree by about 2x10{sup -13}, i.e., almost 4 times the combined error bar and 4 to 5 orders of magnitude larger than the claimed ultimate accuracy of this new type of clocks. Our measurement is in agreement with one of these two values and essentially resolves this discrepancy.

  16. Generation and detection of atomic spin entanglement in optical lattices

    NASA Astrophysics Data System (ADS)

    Dai, Han-Ning; Yang, Bing; Reingruber, Andreas; Xu, Xiao-Fan; Jiang, Xiao; Chen, Yu-Ao; Yuan, Zhen-Sheng; Pan, Jian-Wei

    2016-08-01

    Ultracold atoms in optical lattices hold promise for the creation of entangled states for quantum technologies. Here we report on the generation, manipulation and detection of atomic spin entanglement in an optical superlattice. Using a spin-dependent superlattice, atomic spins in the left or right sites can be individually addressed and coherently manipulated with near-unity fidelities by microwave pulses. The spin entanglement of the two atoms in the double wells of the superlattice is generated via the dynamical evolution governed by spin superexchange. By monitoring the collisional atom loss with in situ absorption imaging we measure the spin correlations of the atoms inside the double wells and obtain a lower bound on the entanglement fidelity of 0.79 +/- 0.06, and a violation of a Bell's inequality S = 2.21 +/- 0.08.

  17. Observation of optical solitons in PT-symmetric lattices

    PubMed Central

    Wimmer, Martin; Regensburger, Alois; Miri, Mohammad-Ali; Bersch, Christoph; Christodoulides, Demetrios N.; Peschel, Ulf

    2015-01-01

    Controlling light transport in nonlinear active environments is a topic of considerable interest in the field of optics. In such complex arrangements, of particular importance is to devise strategies to subdue chaotic behaviour even in the presence of gain/loss and nonlinearity, which often assume adversarial roles. Quite recently, notions of parity-time (PT) symmetry have been suggested in photonic settings as a means to enforce stable energy flow in platforms that simultaneously employ both amplification and attenuation. Here we report the experimental observation of optical solitons in PT-symmetric lattices. Unlike other non-conservative nonlinear arrangements where self-trapped states appear as fixed points in the parameter space of the governing equations, discrete PT solitons form a continuous parametric family of solutions. The possibility of synthesizing PT-symmetric saturable absorbers, where a nonlinear wave finds a lossless path through an otherwise absorptive system is also demonstrated. PMID:26215165

  18. Stability improvements for the NIST Yb optical lattice clock

    NASA Astrophysics Data System (ADS)

    Fasano, R. J.; Schioppo, M.; McGrew, W. F.; Brown, R. C.; Hinkley, N.; Yoon, T. H.; Beloy, K.; Oates, C. W.; Ludlow, A. D.

    2016-05-01

    To reach the fundamental limit given by quantum projection noise, optical lattice clocks require advanced laser stabilization techniques. The NIST ytterbium clock has benefited from several generations of extremely high finesse optical cavities, with cavity linewidths below 1 kHz. Characterization of the cavity drift rate has allowed compensation to the mHz/s level, improving the medium-term stability of the cavity. Based on recent measurements using Ramsey spectroscopy with synchronous interrogation, we report a fractional instability σy(1s) <=10-16 , dominated by atom number fluctuation noise. We also provide updates on our cryogenic sapphire cavity with a reduced thermal noise floor, which will improve our Dick-limited fractional instability at 1 s to below 10-16. Also at University of Colorado.

  19. Mechanical Characterization and Shape Optimization of Fascicle-Like 3D Skeletal Muscle Tissues Contracted with Electrical and Optical Stimuli.

    PubMed

    Neal, Devin; Sakar, Mahmut Selman; Bashir, Rashid; Chan, Vincent; Asada, Haruhiko Harry

    2015-06-01

    In this study, we present a quantitative approach to construct effective 3D muscle tissues through shape optimization and load impedance matching with electrical and optical stimulation. We have constructed long, thin, fascicle-like skeletal muscle tissue and optimized its form factor through mechanical characterization. A new apparatus was designed and built, which allowed us to measure force-displacement characteristics with diverse load stiffnesses. We have found that (1) there is an optimal form factor that maximizes the muscle stress, (2) the energy transmitted to the load can be maximized with matched load stiffness, and (3) optical stimulation using channelrhodopsin2 in the muscle tissue can generate a twitch force as large as its electrical counterpart for well-developed muscle tissue. Using our tissue construct method, we found that an optimal initial diameter of 500 μm outperformed tissues using 250 μm by more than 60% and tissues using 760 μm by 105%. Using optimal load stiffness, our tissues have generated 12 pJ of energy per twitch at a peak generated stress of 1.28 kPa. Additionally, the difference in optically stimulated twitch performance versus electrically stimulated is a function of how well the overall tissue performs, with average or better performing strips having less than 10% difference. The unique mechanical characterization method used is generalizable to diverse load conditions and will be used to match load impedance to muscle tissue impedance for a wide variety of applications.

  20. 3D optical see-through head-mounted display based augmented reality system and its application

    NASA Astrophysics Data System (ADS)

    Zhang, Zhenliang; Weng, Dongdong; Liu, Yue; Xiang, Li

    2015-07-01

    The combination of health and entertainment becomes possible due to the development of wearable augmented reality equipment and corresponding application software. In this paper, we implemented a fast calibration extended from SPAAM for an optical see-through head-mounted display (OSTHMD) which was made in our lab. During the calibration, the tracking and recognition techniques upon natural targets were used, and the spatial corresponding points had been set in dispersed and well-distributed positions. We evaluated the precision of this calibration, in which the view angle ranged from 0 degree to 70 degrees. Relying on the results above, we calculated the position of human eyes relative to the world coordinate system and rendered 3D objects in real time with arbitrary complexity on OSTHMD, which accurately matched the real world. Finally, we gave the degree of satisfaction about our device in the combination of entertainment and prevention of cervical vertebra diseases through user feedbacks.

  1. Measurement of 3D-forces on a Micro Particle in Acoustofluidic Devices Using an Optical Trap

    NASA Astrophysics Data System (ADS)

    Lamprecht, Andreas; Lakämper, Stefan; Schaap, Iwan A. T.; Dual, Jurg

    Here, we use a calibrated high gradient laser trap to directly measure the total time-averaged 3D force on a dielectric silica parti- cle in the regime of an ultrasonic standing wave. Acoustic radiation and acoustic streaming apply forces on an optically trapped particle within an acoustofluidic device. From measuring the induced displacements from the laser trap center in three dimen- sions the acoustic forces (0.2-50pN) can be calculated in dependence of the particle position and excitation frequency. Thus, the real pressure distributions within acoustofluidic devices can be mapped out. The three dimensional direct measurement, as pre- sented here, opens up the possibility to quantify so far inaccessible small scale phenomena such as the effects of: a.) local and global acoustic streaming, and b.) boundaries or close-by objects.

  2. Optical spectrum and local lattice structure for ruby

    NASA Astrophysics Data System (ADS)

    Wang, H.; Kuang, X.-Y.; Mao, A.-J.; Huang, X.-F.

    2007-01-01

    By diagonalizing the 120×120 complete energy matrices for d3 ion in trigonal crystal field, which contains the electrostatic interaction, the trigonal field as well as the spin-orbit interaction, the unified calculation of the whole optical and EPR spectra for ruby are made. And matrix elements of the Zeeman energy with the magnetic field parallel or perpendicular to the trigonal axis are introduced into the complete energy matrices for obtaining the g factors of the energy levels. It is concluded that zero-field splitting and optical spectra as well as g factors are in good agreement with the experimental data and the distorted local lattice structure is determined firstly results from a stretching of the O2- ions along the C3 axis. The pressure-induced shifts of energy levels, g factors and local lattice structure are also discussed. In particular, all the calculations are carried out successfully within the framework of the crystal-field model which is consistent with the opinion of Macfarlane and Sturge that if all terms within the d3 configuration are included, one need not go outside conventional crystal-field theory.

  3. Quantum simulation of antiferromagnetic spin chains in an optical lattice.

    PubMed

    Simon, Jonathan; Bakr, Waseem S; Ma, Ruichao; Tai, M Eric; Preiss, Philipp M; Greiner, Markus

    2011-04-21

    Understanding exotic forms of magnetism in quantum mechanical systems is a central goal of modern condensed matter physics, with implications for systems ranging from high-temperature superconductors to spintronic devices. Simulating magnetic materials in the vicinity of a quantum phase transition is computationally intractable on classical computers, owing to the extreme complexity arising from quantum entanglement between the constituent magnetic spins. Here we use a degenerate Bose gas of rubidium atoms confined in an optical lattice to simulate a chain of interacting quantum Ising spins as they undergo a phase transition. Strong spin interactions are achieved through a site-occupation to pseudo-spin mapping. As we vary a magnetic field, quantum fluctuations drive a phase transition from a paramagnetic phase into an antiferromagnetic phase. In the paramagnetic phase, the interaction between the spins is overwhelmed by the applied field, which aligns the spins. In the antiferromagnetic phase, the interaction dominates and produces staggered magnetic ordering. Magnetic domain formation is observed through both in situ site-resolved imaging and noise correlation measurements. By demonstrating a route to quantum magnetism in an optical lattice, this work should facilitate further investigations of magnetic models using ultracold atoms, thereby improving our understanding of real magnetic materials.

  4. Micro-resonators coupled to atoms in an optical lattice

    NASA Astrophysics Data System (ADS)

    Geraci, Andrew; Kitching, John

    2010-03-01

    Recently there has been a convergence of ideas between the fields of solid-state and atomic physics -- examples range from using atoms for quantum simulation of condensed-matter Hamiltonians to physically coupling atoms with solid-state devices such as micro-resonators. In this talk, we discuss an experimental proposal involving an array of cooled microcantilevers coupled to a sample of ultracold atoms trapped near a microfabricated surface [1]. The cantilevers allow individual lattice site addressing for atomic state control and readout, and potentially may be useful in optical lattice quantum computation schemes. Assuming resonators can be cooled to their vibrational ground state, we describe the implementation of a two-qubit controlled-NOT gate with atomic internal states and the motional states of the resonators, along with a protocol for entangling two or more cantilevers on the atom chip using the trapped atoms as an intermediary. Although similar experiments could be carried out with magnetic microchip traps, the optical confinement scheme we consider may exhibit reduced near-field magnetic noise and decoherence. Prospects for using this system for tests of quantum mechanics at macroscopic scales or quantum information processing will be discussed. [4pt] [1] A. Geraci and J. Kitching, Phys. Rev. A 80, 032317 (2009)

  5. Acentric lattice electro-optic materials by rational design

    NASA Astrophysics Data System (ADS)

    Dalton, Larry; Robinson, Bruce; Jen, Alex; Ried, Philip; Eichinger, Bruce; Sullivan, Philip; Akelaitis, Andrew; Bale, Denise; Haller, Marnie; Luo, Jingdong; Liu, Sen; Liao, Yi; Firestone, Kimberly; Bhatambrekar, Nishant; Bhattacharjee, Sanchali; Sinness, Jessica; Hammond, Scott; Buker, Nicholas; Snoeberger, Robert; Lingwood, Mark; Rommel, Harry; Amend, Joe; Jang, Sei-Hum; Chen, Antao; Steier, William

    2005-08-01

    Quantum and statistical mechanical calculations have been used to guide the improvement of the macroscopic electro-optic activity of organic thin film materials to values greater than 300 pm/V at telecommunication wavelengths. Various quantum mechanical methods (Hartree-Fock, INDO, and density functional theory) have been benchmarked and shown to be reliable for estimating trends in molecular first hyperpolarizability, β, for simple variation of donor, bridge, and acceptor structures of charge-transfer (dipolar) chromophores. β values have been increased significantly over the past five years and quantum mechanical calculations suggest that they can be further significantly improved. Statistical mechanical calculations, including pseudo-atomistic Monte Carlo calculations, have guided the design of the super/supramolecular structures of chromophores so that they assemble, under the influence of electric field poling, into macroscopic lattices with high degrees of acentric order. Indeed, during the past year, chromophores doped into single- and multi-chromophore-containing dendrimer materials to form binary glasses have yielded thin films that exhibit electro-optic activities at telecommunication wavelengths of greater than 300 pm/V. Such materials may be viewed as intermediate between chromophore/polymer composites and crystalline organic chromophore materials. Theory suggests that further improvements of electro-optic activity are possible. Auxiliary properties of these materials, including optical loss, thermal and photochemical stability, and processability are discussed. Such organic electro-optic materials have been incorporated into silicon photonic circuitry for active wavelength division multiplexing, reconfigurable optical add/drop multiplexing, and high bandwidth optical rectification. A variety of all-organic devices, including stripline, cascaded prism, Fabry-Perot etalon, and ring microresonator devices, have been fabricated and evaluated.

  6. Fabrication and characterization of a 3-D non-homogeneous tissue-like mouse phantom for optical imaging

    NASA Astrophysics Data System (ADS)

    Avtzi, Stella; Zacharopoulos, Athanasios; Psycharakis, Stylianos; Zacharakis, Giannis

    2013-11-01

    In vivo optical imaging of biological tissue not only requires the development of new theoretical models and experimental procedures, but also the design and construction of realistic tissue-mimicking phantoms. However, most of the phantoms available currently in literature or the market, have either simple geometrical shapes (cubes, slabs, cylinders) or when realistic in shape they use homogeneous approximations of the tissue or animal under investigation. The goal of this study is to develop a non-homogeneous realistic phantom that matches the anatomical geometry and optical characteristics of the mouse head in the visible and near-infrared spectral range. The fabrication of the phantom consisted of three stages. Initially, anatomical information extracted from either mouse head atlases or structural imaging modalities (MRI, XCT) was used to design a digital phantom comprising of the three main layers of the mouse head; the brain, skull and skin. Based on that, initial prototypes were manufactured by using accurate 3D printing, allowing complex objects to be built layer by layer with sub-millimeter resolution. During the second stage the fabrication of individual molds was performed by embedding the prototypes into a rubber-like silicone mixture. In the final stage the detailed phantom was constructed by loading the molds with epoxy resin of controlled optical properties. The optical properties of the resin were regulated by using appropriate quantities of India ink and intralipid. The final phantom consisted of 3 layers, each one with different absorption and scattering coefficient (μa,μs) to simulate the region of the mouse brain, skull and skin.

  7. Optical sectioning and 3D reconstructions as an alternative to scanning electron microscopy for analysis of cell shape1

    PubMed Central

    Landis, Jacob B.; Ventura, Kayla L.; Soltis, Douglas E.; Soltis, Pamela S.; Oppenheimer, David G.

    2015-01-01

    Premise of the study: Visualizing flower epidermal cells is often desirable for investigating the interaction between flowers and their pollinators, in addition to the broader range of ecological interactions in which flowers are involved. We developed a protocol for visualizing petal epidermal cells without the limitations of the commonly used method of scanning electron microscopy (SEM). Methods: Flower material was collected and fixed in glutaraldehyde, followed by dehydration in an ethanol series. Flowers were dissected to collect petals, and subjected to a Histo-Clear series to remove the cuticle. Material was then stained with aniline blue, mounted on microscope slides, and imaged using a compound fluorescence microscope to obtain optical sections that were reconstructed into a 3D image. Results: This optical sectioning method yielded high-quality images of the petal epidermal cells with virtually no damage to cells. Flowers were processed in larger batches than are possible using common SEM methods. Also, flower size was not a limiting factor as often observed in SEM studies. Flowers up to 5 cm in length were processed and mounted for visualization. Conclusions: This method requires no special equipment for sample preparation prior to imaging and should be seen as an alternative method to SEM. PMID:25909040

  8. Direct laser-writing of ferroelectric single-crystal waveguide architectures in glass for 3D integrated optics.

    PubMed

    Stone, Adam; Jain, Himanshu; Dierolf, Volkmar; Sakakura, Masaaki; Shimotsuma, Yasuhiko; Miura, Kiyotaka; Hirao, Kazuyuki; Lapointe, Jerome; Kashyap, Raman

    2015-01-01

    Direct three-dimensional laser writing of amorphous waveguides inside glass has been studied intensely as an attractive route for fabricating photonic integrated circuits. However, achieving essential nonlinear-optic functionality in such devices will also require the ability to create high-quality single-crystal waveguides. Femtosecond laser irradiation is capable of crystallizing glass in 3D, but producing optical-quality single-crystal structures suitable for waveguiding poses unique challenges that are unprecedented in the field of crystal growth. In this work, we use a high angular-resolution electron diffraction method to obtain the first conclusive confirmation that uniform single crystals can be grown inside glass by femtosecond laser writing under optimized conditions. We confirm waveguiding capability and present the first quantitative measurement of power transmission through a laser-written crystal-in-glass waveguide, yielding loss of 2.64 dB/cm at 1530 nm. We demonstrate uniformity of the crystal cross-section down the length of the waveguide and quantify its birefringence. Finally, as a proof-of-concept for patterning more complex device geometries, we demonstrate the use of dynamic phase modulation to grow symmetric crystal junctions with single-pass writing. PMID:25988599

  9. Direct laser-writing of ferroelectric single-crystal waveguide architectures in glass for 3D integrated optics

    PubMed Central

    Stone, Adam; Jain, Himanshu; Dierolf, Volkmar; Sakakura, Masaaki; Shimotsuma, Yasuhiko; Miura, Kiyotaka; Hirao, Kazuyuki; Lapointe, Jerome; Kashyap, Raman

    2015-01-01

    Direct three-dimensional laser writing of amorphous waveguides inside glass has been studied intensely as an attractive route for fabricating photonic integrated circuits. However, achieving essential nonlinear-optic functionality in such devices will also require the ability to create high-quality single-crystal waveguides. Femtosecond laser irradiation is capable of crystallizing glass in 3D, but producing optical-quality single-crystal structures suitable for waveguiding poses unique challenges that are unprecedented in the field of crystal growth. In this work, we use a high angular-resolution electron diffraction method to obtain the first conclusive confirmation that uniform single crystals can be grown inside glass by femtosecond laser writing under optimized conditions. We confirm waveguiding capability and present the first quantitative measurement of power transmission through a laser-written crystal-in-glass waveguide, yielding loss of 2.64 dB/cm at 1530 nm. We demonstrate uniformity of the crystal cross-section down the length of the waveguide and quantify its birefringence. Finally, as a proof-of-concept for patterning more complex device geometries, we demonstrate the use of dynamic phase modulation to grow symmetric crystal junctions with single-pass writing. PMID:25988599

  10. Insertion of a single-molecule magnet inside a ferromagnetic lattice based on a 3D bimetallic oxalate network: towards molecular analogues of permanent magnets.

    PubMed

    Clemente-León, Miguel; Coronado, Eugenio; Gómez-García, Carlos J; López-Jordà, Maurici; Camón, Agustín; Repollés, Ana; Luis, Fernando

    2014-02-01

    The insertion of the single-molecule magnet (SMM) [Mn(III)(salen)(H2O)]2(2+) (salen(2-) = N,N'-ethylenebis-(salicylideneiminate)) into a ferromagnetic bimetallic oxalate network affords the hybrid compound [Mn(III)(salen)(H2O)]2[Mn(II)Cr(III)(ox)3]2⋅(CH3OH)⋅(CH3CN)2 (1). This cationic Mn2 cluster templates the growth of crystals formed by an unusual achiral 3D oxalate network. The magnetic properties of this hybrid magnet are compared with those of the analogous compounds [Mn(III)(salen)(H2O)]2[Zn(II)Cr(III)(ox)3]2⋅(CH3OH)⋅(CH3CN)2 (2) and [In(III)(sal2-trien)][Mn(II)Cr(III)(ox)3]⋅(H2O)0.25⋅(CH3OH)0.25⋅(CH3CN)0.25 (3), which are used as reference compounds. In 2 it has been shown that the magnetic isolation of the Mn2 clusters provided by their insertion into a paramagnetic oxalate network of Cr(III) affords a SMM behavior, albeit with blocking temperatures well below 500 mK even for frequencies as high as 160 kHz. In 3 the onset of ferromagnetism in the bimetallic Mn(II) Cr(III) network is observed at Tc = 5 K. Finally, in the hybrid compound 1 the interaction between the two magnetic networks leads to the antiparallel arrangement of their respective magnetizations, that is, to a ferrimagnetic phase. This coupling induces also important changes on the magnetic properties of 1 with respect to those of the reference compounds 2 and 3. In particular, compound 1 shows a large magnetization hysteresis below 1 K, which is in sharp contrast with the near-reversible magnetizations that the SMMs and the oxalate ferromagnetic lattice show under the same conditions.

  11. 3D Cloud Tomography, Followed by Mean Optical and Microphysical Properties, with Multi-Angle/Multi-Pixel Data

    NASA Astrophysics Data System (ADS)

    Davis, A. B.; von Allmen, P. A.; Marshak, A.; Bal, G.

    2010-12-01

    -type model is used where the cloud surface "emits" either reflected (sunny-side) or transmitted (shady-side) light at different levels. As it turns out, the reflected/transmitted light ratio yields an approximate cloud optical thickness. Another approach is to invoke tomography techniques to define the volume occupied by the cloud using, as it were, cloud masks for each direction of observation. In the shape and opacity refinement phase, initial guesses along with solar and viewing geometry information are used to predict radiance in each pixel using a fast diffusion model for the 3D RT in MISR's non-absorbing red channel (275 m resolution). Refinement is constrained and stopped when optimal resolution is reached. Finally, multi-pixel/mono-angle MODIS data for the same cloud (at comparable 250 m resolution) reveals the desired droplet size information, hence the volume-averaged LWC. This is an ambitious remote sensing science project drawing on cross-disciplinary expertise gained in medical imaging using both X-ray and near-IR sources and detectors. It is high risk but with potentially high returns not only for the cloud modeling community but also aerosol and surface characterization in the presence of broken 3D clouds.

  12. Collective excitations of a trapped Bose-Einstein condensate in the presence of weak disorder and a two-dimensional optical lattice

    SciTech Connect

    Hu Ying; Liang Zhaoxin; Hu Bambi

    2010-05-15

    We investigate the combined effects of weak disorder and a two-dimensional (2D) optical lattice on the collective excitations of a harmonically trapped Bose-Einstein condensate (BEC) at zero temperature. Accordingly, we generalize the hydrodynamic equations of superfluid for a weakly interacting Bose gas in a 2D optical lattice to include the effects of weak disorder. Our analytical results for the collective frequencies beyond the mean-field approximation reveal the peculiar role of disorder, interplaying with the 2D optical lattice and interatomic interaction, on elementary excitations along the 3D to 1D crossover. In particular, consequences of disorder on the phonon propagation and surface modes are analyzed in detail. The experimental scenario is also proposed.

  13. Direct observation of macrostructure formation of hierarchically structured meso-macroporous aluminosilicates with 3D interconnectivity by optical microscope.

    PubMed

    Lemaire, Arnaud; Rooke, Joanna Claire; Chen, Li-Hua; Su, Bao-Lian

    2011-03-15

    Hierarchically structured spongy meso-macroporous aluminosilicates with high tetrahedral aluminum content were synthesized from a mixture of single molecular alkoxide precursor, (sec-BuO)2-Al-O-Si(OEt)3, already containing Si-O-Al bonds, and a silica coreactant, tetramethoxysilane (TMOS). The spontaneous byproduct templated macroporous structure formation has been directly visualized using in situ high-resolution optical microscopy (OM), allowing the crucial observation of a microbubble dispersion which is directly correlated to the macrostructure observed by electronic microscopies (SEM and TEM). This discovery leads to a comparative study with meso-macroporous pure metal oxide and to a proposal of the formation mechanism of meso-macroporous aluminosilicates with 3D interconnectivity. The aluminosilicate phase/microbubbles emulsion is produced by a phase separation process occurring between the aluminosilicate nanoparticles and the liquid hydrolysis-condensation reaction byproducts (water, methanol, ethanol, and butanol). The use of alkoxysilane improves the heterocondensation rates between the highly reactive aluminum alkoxide part of the single precursor and added silica species but, above all, leads to the spontaneous generation of an unusual meso-macroporosity in alkaline media. The particles obtained at pH = 13.0 featured regular micrometer-sized macrospheres separated by very thin mesoporous walls and connected by submicrometric openings, providing a 3D interconnectivity. The slight increase in pH value to 13.5 induced significant modifications in morphology and textural properties due to the slower gelification process of the aluminosilicate phase, resulting in the formation of an aluminosilicate material constituted of 1-2 µm large independent hollow mesoporous spheres.

  14. Short term reproducibility of a high contrast 3-D isotropic optic nerve imaging sequence in healthy controls

    NASA Astrophysics Data System (ADS)

    Harrigan, Robert L.; Smith, Alex K.; Mawn, Louise A.; Smith, Seth A.; Landman, Bennett A.

    2016-03-01

    The optic nerve (ON) plays a crucial role in human vision transporting all visual information from the retina to the brain for higher order processing. There are many diseases that affect the ON structure such as optic neuritis, anterior ischemic optic neuropathy and multiple sclerosis. Because the ON is the sole pathway for visual information from the retina to areas of higher level processing, measures of ON damage have been shown to correlate well with visual deficits. Increased intracranial pressure has been shown to correlate with the size of the cerebrospinal fluid (CSF) surrounding the ON. These measures are generally taken at an arbitrary point along the nerve and do not account for changes along the length of the ON. We propose a high contrast and high-resolution 3-D acquired isotropic imaging sequence optimized for ON imaging. We have acquired scan-rescan data using the optimized sequence and a current standard of care protocol for 10 subjects. We show that this sequence has superior contrast-to-noise ratio to the current standard of care while achieving a factor of 11 higher resolution. We apply a previously published automatic pipeline to segment the ON and CSF sheath and measure the size of each individually. We show that these measures of ON size have lower short- term reproducibility than the population variance and the variability along the length of the nerve. We find that the proposed imaging protocol is (1) useful in detecting population differences and local changes and (2) a promising tool for investigating biomarkers related to structural changes of the ON.

  15. Short Term Reproducibility of a High Contrast 3-D Isotropic Optic Nerve Imaging Sequence in Healthy Controls

    PubMed Central

    Harrigan, Robert L.; Smith, Alex K.; Mawn, Louise A.; Smith, Seth A.; Landman, Bennett A.

    2016-01-01

    The optic nerve (ON) plays a crucial role in human vision transporting all visual information from the retina to the brain for higher order processing. There are many diseases that affect the ON structure such as optic neuritis, anterior ischemic optic neuropathy and multiple sclerosis. Because the ON is the sole pathway for visual information from the retina to areas of higher level processing, measures of ON damage have been shown to correlate well with visual deficits. Increased intracranial pressure has been shown to correlate with the size of the cerebrospinal fluid (CSF) surrounding the ON. These measures are generally taken at an arbitrary point along the nerve and do not account for changes along the length of the ON. We propose a high contrast and high-resolution 3-D acquired isotropic imaging sequence optimized for ON imaging. We have acquired scan-rescan data using the optimized sequence and a current standard of care protocol for 10 subjects. We show that this sequence has superior contrast-to-noise ratio to the current standard of care while achieving a factor of 11 higher resolution. We apply a previously published automatic pipeline to segment the ON and CSF sheath and measure the size of each individually. We show that these measures of ON size have lower short-term reproducibility than the population variance and the variability along the length of the nerve. We find that the proposed imaging protocol is (1) useful in detecting population differences and local changes and (2) a promising tool for investigating biomarkers related to structural changes of the ON. PMID:27175048

  16. Optical absorption in 3D topological insulator Bi2Te3 with applications to THz detectors (Presentation Recording)

    NASA Astrophysics Data System (ADS)

    Sengupta, Parijat; Bellotti, Enrico

    2015-08-01

    Topological insulators (TI) are a new class of materials that have an energy gap in bulk but possess gapless states bound to the sample surface or edge that have been theoretically predicted and experimentally observed [1]. The topological state in Bi2Te3 is characterized by a linear dispersion and a Dirac cone at the Γpoint. The optical absorption on the surface of a TI is given by the standard graphene-like απ/2 when a linear dispersion is assumed. Realistically, at k-points away from Γ, higher order cubic terms in k that represent the underlying hexagonal symmetry [2] of the crystal dominate and give rise to warping of bands. The optical absorption of a ferromagnetic coated gapped 3D TI film with warping terms considered is longer απ/2 but significantly modified. We demonstrate, by using wave functions from a continuum-Hamiltonian and Fermi-golden rule, the absorption spectrum on the surface of a TI as a function of the chemical potential, film-thickness and incident photon energy. A linear response theory based calculation is also performed using the Kubo formula to determine the longitudinal optical conductivity whose real part gives absorption as a function of photon frequency. The absorption in materials with Dirac fermions which is significantly higher than in normal THz detectors [3] can be further modulated in a TI by explicitly including the warping term making them highly efficient and tunable photodetectors. [1] M.Hasan and C.Kane, Rev.Mod.Phys. 82, 3045(2010) [2] L.Fu, Phys.Rev.Lett.103, 266801(2009) [3] X.Zhang et al., Phys. Rev B, 82, 245107(2010)

  17. Squeezing out the entropy of fermions in optical lattices

    PubMed Central

    Ho, Tin-Lun; Zhou, Qi

    2009-01-01

    At present, there is considerable interest in using atomic fermions in optical lattices to emulate the mathematical models that have been used to study strongly correlated electronic systems. Some of these models, such as the 2-dimensional fermion Hubbard model, are notoriously difficult to solve, and their key properties remain controversial despite decades of studies. It is hoped that the emulation experiments will shed light on some of these long-standing problems. A successful emulation, however, requires reaching temperatures as low as 10−12 K and beyond, with entropy per particle far lower than what can be achieved today. Achieving such low-entropy states is an essential step and a grand challenge of the whole emulation enterprise. In this article, we point out a method to literally squeeze the entropy out from a Fermi gas into a surrounding Bose–Einstein condensed gas, which acts as a heat reservoir. This method allows one to reduce the entropy per particle of a lattice Fermi gas to a few percent of the lowest value obtainable today. PMID:19365065

  18. State diagrams for harmonically trapped bosons in optical lattices

    SciTech Connect

    Rigol, Marcos; Batrouni, George G.; Rousseau, Valery G.; Scalettar, Richard T.

    2009-05-15

    We use quantum Monte Carlo simulations to obtain zero-temperature state diagrams for strongly correlated lattice bosons in one and two dimensions under the influence of a harmonic confining potential. Since harmonic traps generate a coexistence of superfluid and Mott insulating domains, we use local quantities such as the quantum fluctuations of the density and a local compressibility to identify the phases present in the inhomogeneous density profiles. We emphasize the use of the 'characteristic density' to produce a state diagram that is relevant to experimental optical lattice systems, regardless of the number of bosons or trap curvature and of the validity of the local-density approximation. We show that the critical value of U/t at which Mott insulating domains appear in the trap depends on the filling in the system, and it is in general greater than the value in the homogeneous system. Recent experimental results by Spielman et al. [Phys. Rev. Lett. 100, 120402 (2008)] are analyzed in the context of our two-dimensional state diagram, and shown to exhibit a value for the critical point in good agreement with simulations. We also study the effects of finite, but low (T{<=}t/2), temperatures. We find that in two dimensions they have little influence on our zero-temperature results, while their effect is more pronounced in one dimension.

  19. Phases of d-orbital bosons in optical lattices

    NASA Astrophysics Data System (ADS)

    Pinheiro, Fernanda; Matrikainen, Jani-Petri; Larson, Jonas

    2015-05-01

    We explore the properties of bosonic atoms loaded into the d bands of an isotropic square optical lattice. Following the recent experimental success reported in Zhai et al (2013 Phys. Rev. A 87 063638), in which populating d bands with a 99 % fidelity was demonstrated, we present a theoretical study of the possible phases that can appear in this system. Using the Gutzwiller ansatz for the three d band orbitals we map the boundaries of the Mott insulating phases. For not too large occupation, two of the orbitals are predominantly occupied, while the third, of a slightly higher energy, remains almost unpopulated. In this regime, in the superfluid phase we find the formation of a vortex lattice, where the vortices come in vortex/anti-vortex pairs with two pairs locked to every site. Due to the orientation of the vortices time-reversal symmetry is spontaneously broken. This state also breaks a discrete {{{Z}}2}-symmetry. We further derive an effective spin-1/2 model that describe the relevant physics of the lowest Mott-phase with unit filling. We argue that the corresponding two dimensional phase diagram should be rich with several different phases. We also explain how to generate anti-symmetric spin interactions that can give rise to novel effects like spin canting.

  20. Experimental realization of an optical second with strontium lattice clocks.

    PubMed

    Le Targat, R; Lorini, L; Le Coq, Y; Zawada, M; Guéna, J; Abgrall, M; Gurov, M; Rosenbusch, P; Rovera, D G; Nagórny, B; Gartman, R; Westergaard, P G; Tobar, M E; Lours, M; Santarelli, G; Clairon, A; Bize, S; Laurent, P; Lemonde, P; Lodewyck, J

    2013-01-01

    Progress in realizing the SI second had multiple technological impacts and enabled further constraint of theoretical models in fundamental physics. Caesium microwave fountains, realizing best the second according to its current definition with a relative uncertainty of 2-4 × 10(-16), have already been overtaken by atomic clocks referenced to an optical transition, which are both more stable and more accurate. Here we present an important step in the direction of a possible new definition of the second. Our system of five clocks connects with an unprecedented consistency the optical and the microwave worlds. For the first time, two state-of-the-art strontium optical lattice clocks are proven to agree within their accuracy budget, with a total uncertainty of 1.5 × 10(-16). Their comparison with three independent caesium fountains shows a degree of accuracy now only limited by the best realizations of the microwave-defined second, at the level of 3.1 × 10(-16).

  1. Experimental realization of an optical second with strontium lattice clocks.

    PubMed

    Le Targat, R; Lorini, L; Le Coq, Y; Zawada, M; Guéna, J; Abgrall, M; Gurov, M; Rosenbusch, P; Rovera, D G; Nagórny, B; Gartman, R; Westergaard, P G; Tobar, M E; Lours, M; Santarelli, G; Clairon, A; Bize, S; Laurent, P; Lemonde, P; Lodewyck, J

    2013-01-01

    Progress in realizing the SI second had multiple technological impacts and enabled further constraint of theoretical models in fundamental physics. Caesium microwave fountains, realizing best the second according to its current definition with a relative uncertainty of 2-4 × 10(-16), have already been overtaken by atomic clocks referenced to an optical transition, which are both more stable and more accurate. Here we present an important step in the direction of a possible new definition of the second. Our system of five clocks connects with an unprecedented consistency the optical and the microwave worlds. For the first time, two state-of-the-art strontium optical lattice clocks are proven to agree within their accuracy budget, with a total uncertainty of 1.5 × 10(-16). Their comparison with three independent caesium fountains shows a degree of accuracy now only limited by the best realizations of the microwave-defined second, at the level of 3.1 × 10(-16). PMID:23839206

  2. Frequency comparison of optical lattice clocks beyond the Dick limit

    NASA Astrophysics Data System (ADS)

    Takamoto, Masao; Takano, Tetsushi; Katori, Hidetoshi

    2011-05-01

    The supreme accuracy of atomic clocks relies on the universality of atomic transition frequencies. The stability of a clock, meanwhile, measures how quickly the clock's statistical uncertainties are reduced. The ultimate measure of stability is provided by the quantum projection noise, which improves as 1/√N by measuring N uncorrelated atoms. Quantum projection noise limited stabilities have been demonstrated in caesium clocks and in single-ion optical clocks, where the quantum noise overwhelms the Dick effect attributed to local oscillator noise. Here, we demonstrate a synchronous frequency comparison of two optical lattice clocks using 87Sr and 88Sr atoms, respectively, for which the Allan standard deviation reached 1 × 10-17 in an averaging time of 1,600 s by cancelling out the Dick effect to approach the quantum projection noise limit. The scheme demonstrates the advantage of using a large number (N ~ 1,000) of atoms in optical clocks and paves the way to investigating the inherent uncertainties of clocks and relativistic geodesy on a timescale of tens of minutes.

  3. Quantum phases of bosons in double-well optical lattices

    SciTech Connect

    Danshita, I.; Williams, J. E.; Melo, C. A. R. sa de; Clark, C. W.

    2007-10-15

    We study the superfluid and insulating phases of bosons in double-well optical lattices, and focus on the specific example of a two-legged ladder, which is currently accessible in experiments. We obtain the zero-temperature phase diagram using both mean-field and time-evolving block decimation techniques. We find that the mean-field approach describes the correct phase boundaries only when the intrachain hopping is sufficiently small in comparison to the on-site repulsion. We show the dependence of the phase diagram on the interchain hopping or tilt between double wells. We find that the Mott-insulator phase at unit filling exhibits a nonmonotonic behavior as a function of the tilt parameter, producing a reentrant phase transition between Mott insulator and superfluid phases. Finally, we determine the critical point separating the insulating and superfluid phases at commensurate fillings, where the Berezinskii-Kosterlitz-Thouless transition occurs.

  4. Quantum states of p-band bosons in optical lattices

    SciTech Connect

    Collin, A.; Larson, J.; Martikainen, J.-P.

    2010-02-15

    We study a gas of repulsively interacting bosons in the first excited band of an optical lattice. We explore this p-band physics both within the framework of a standard mean-field theory as well as with the more accurate generalized Gutzwiller ansatz. We find the phase diagrams for two- and three-dimensional systems and characterize the first Mott-states which typically possess an integer or half-integer vortex structure. Furthermore, we find that even though the p-band model has strongly anisotropic kinetic energies and interflavor interaction terms are missing in the lowest band theory, the mean-field theory becomes useful quite rapidly once the transition from the Mott insulator to the superfluid is crossed.

  5. Dynamics of pattern-loaded fermions in bichromatic optical lattices

    NASA Astrophysics Data System (ADS)

    Reichl, Matthew D.; Mueller, Erich J.

    2016-03-01

    Motivated by experiments in Munich [M. Schreiber et al., Science 349, 842 (2015)., 10.1126/science.aaa7432], we study the dynamics of interacting fermions initially prepared in charge density wave states in one-dimensional bichromatic optical lattices. The experiment sees a marked lack of thermalization, which has been taken as evidence for an interacting generalization of Anderson localization, dubbed "many-body localization." We model the experiments using an interacting Aubry-Andre model and develop a computationally efficient low-density cluster expansion to calculate the even-odd density imbalance as a function of interaction strength and potential strength. Our calculations agree with the experimental results and shed light on the phenomena. We also explore a two-dimensional generalization. The cluster expansion method we develop should have broad applicability to similar problems in nonequilibrium quantum physics.

  6. Simulating the Wess-Zumino Supersymmetry Model in Optical Lattices

    SciTech Connect

    Yu Yue; Yang Kun

    2010-10-08

    We study a cold atom-molecule mixture in two-dimensional optical lattices. We show that, by fine-tuning the atomic and molecular interactions, the Wess-Zumino supersymmetry (SUSY) model in 2+1 dimensions emerges in the low-energy limit and can be simulated in such mixtures. At zero temperature, SUSY is not spontaneously broken, which implies identical relativistic dispersions of the atom and its superpartner, a bosonic diatom molecule. This defining signature of SUSY can be probed by single-particle spectroscopies. Thermal breaking of SUSY at a finite temperature is accompanied by a thermal Goldstone fermion, i.e., phonino excitation. This and other signatures of broken SUSY can also be probed experimentally.

  7. Prospective motion correction of 3D echo-planar imaging data for functional MRI using optical tracking.

    PubMed

    Todd, Nick; Josephs, Oliver; Callaghan, Martina F; Lutti, Antoine; Weiskopf, Nikolaus

    2015-06-01

    We evaluated the performance of an optical camera based prospective motion correction (PMC) system in improving the quality of 3D echo-planar imaging functional MRI data. An optical camera and external marker were used to dynamically track the head movement of subjects during fMRI scanning. PMC was performed by using the motion information to dynamically update the sequence's RF excitation and gradient waveforms such that the field-of-view was realigned to match the subject's head movement. Task-free fMRI experiments on five healthy volunteers followed a 2 × 2 × 3 factorial design with the following factors: PMC on or off; 3.0mm or 1.5mm isotropic resolution; and no, slow, or fast head movements. Visual and motor fMRI experiments were additionally performed on one of the volunteers at 1.5mm resolution comparing PMC on vs PMC off for no and slow head movements. Metrics were developed to quantify the amount of motion as it occurred relative to k-space data acquisition. The motion quantification metric collapsed the very rich camera tracking data into one scalar value for each image volume that was strongly predictive of motion-induced artifacts. The PMC system did not introduce extraneous artifacts for the no motion conditions and improved the time series temporal signal-to-noise by 30% to 40% for all combinations of low/high resolution and slow/fast head movement relative to the standard acquisition with no prospective correction. The numbers of activated voxels (p<0.001, uncorrected) in both task-based experiments were comparable for the no motion cases and increased by 78% and 330%, respectively, for PMC on versus PMC off in the slow motion cases. The PMC system is a robust solution to decrease the motion sensitivity of multi-shot 3D EPI sequences and thereby overcome one of the main roadblocks to their widespread use in fMRI studies.

  8. Prospective motion correction of 3D echo-planar imaging data for functional MRI using optical tracking

    PubMed Central

    Todd, Nick; Josephs, Oliver; Callaghan, Martina F.; Lutti, Antoine; Weiskopf, Nikolaus

    2015-01-01

    We evaluated the performance of an optical camera based prospective motion correction (PMC) system in improving the quality of 3D echo-planar imaging functional MRI data. An optical camera and external marker were used to dynamically track the head movement of subjects during fMRI scanning. PMC was performed by using the motion information to dynamically update the sequence's RF excitation and gradient waveforms such that the field-of-view was realigned to match the subject's head movement. Task-free fMRI experiments on five healthy volunteers followed a 2 × 2 × 3 factorial design with the following factors: PMC on or off; 3.0 mm or 1.5 mm isotropic resolution; and no, slow, or fast head movements. Visual and motor fMRI experiments were additionally performed on one of the volunteers at 1.5 mm resolution comparing PMC on vs PMC off for no and slow head movements. Metrics were developed to quantify the amount of motion as it occurred relative to k-space data acquisition. The motion quantification metric collapsed the very rich camera tracking data into one scalar value for each image volume that was strongly predictive of motion-induced artifacts. The PMC system did not introduce extraneous artifacts for the no motion conditions and improved the time series temporal signal-to-noise by 30% to 40% for all combinations of low/high resolution and slow/fast head movement relative to the standard acquisition with no prospective correction. The numbers of activated voxels (p < 0.001, uncorrected) in both task-based experiments were comparable for the no motion cases and increased by 78% and 330%, respectively, for PMC on versus PMC off in the slow motion cases. The PMC system is a robust solution to decrease the motion sensitivity of multi-shot 3D EPI sequences and thereby overcome one of the main roadblocks to their widespread use in fMRI studies. PMID:25783205

  9. Localization of two-component Bose-Einstein condensates in optical lattices.

    PubMed

    Ostrovskaya, Elena A; Kivshar, Yuri S

    2004-05-01

    We study nonlinear localization of a two-component Bose-Einstein condensate (BEC) in a one-dimensional optical lattice. Our theory shows that spin-dependent optical lattices can be used to effectively manipulate the nonlinear interactions between the BEC components, and to observe composite localized states of a BEC in both bands and gaps of the matter-wave spectrum.

  10. Orbit, optics and chromaticity correction for PS2 negative momentum compaction lattices

    SciTech Connect

    Papaphilippou,Y.; Barranco, J.; Bartmann, W.; Benedikt, M.; Carli, C.; de Maria, R.; Peggs, S.; Trbojevic, D.

    2009-05-04

    The effect of magnet misalignments in the beam orbit and linear optics functions are reviewed and correction schemes are applied to the negative momentum compaction lattice of PS2. Chromaticity correction schemes are also proposed and tested with respect to off-momentum optics properties. The impact of the correction schemes in the dynamic aperture of the lattice is finally evaluated.

  11. Progress in sorting individual atoms in 3D

    NASA Astrophysics Data System (ADS)

    Wu, Tsung-Yao; Kumar, Aishwarya; Wang, Yang; Weiss, David

    2016-05-01

    An exactly unity filled optical lattice is a desirable initial state for a neutral atom quantum computer. We have previously proposed an efficient way to compact a partially filled lattice into a perfectly filled one, by combining site-resolved imaging, site-selective qubit rotations and state-selective motion steps. We have previously demonstrated site-resolved imaging and site-selective rotations in our system of cesium atoms in a 40% filled 5x5x5 3D lattice. We have now demonstrated the final element, state-selective motion steps in 3D produced by rotating the polarizations of one of the lattice beams in each pair. We will present our progress in putting all the elements together to reach perfect unity filling. Supported by NSF.

  12. Towards quantum many-body physics with Sr in optical lattices

    NASA Astrophysics Data System (ADS)

    Blatt, Sebastian; Jansa, Nejc; Escudero, Rodrigo G.; Heinz, André; Park, Annie Jihyun; Snigirev, Stepan; Dalibard, Jean; Bloch, Immanuel

    2016-05-01

    Within the last decade, fermionic alkaline earth atoms in optical lattices have become a platform for precision measurements, culminating in the realization of an atomic clock with the currently highest stability and accuracy at the 2 ×10-18 level. In the meantime, quantum degenerate gases of all bosonic and fermionic isotopes of Sr have been realized. With the extension of the quantum gas microscopy technique to fermionic alkali metal atoms, experiments with quantum degenerate gases in optical lattices have taken another step towards full control over the internal and external degrees of freedom of fermions in optical lattices. Here, we report on the construction of a new experiment with quantum degenerate gases of Sr in optical lattices. Our experiment aims to combine the high spatial control over the atomic degrees of freedom from quantum gas microscopy with the precision control over the internal degrees of freedom enabled by optical lattice clock techniques.

  13. Gabor-domain optical coherence microscopy with integrated dual-axis MEMS scanner for fast 3D imaging and metrology

    NASA Astrophysics Data System (ADS)

    Canavesi, Cristina; Cogliati, Andrea; Hayes, Adam; Santhanam, Anand P.; Tankam, Patrice; Rolland, Jannick P.

    2015-10-01

    Fast, robust, nondestructive 3D imaging is needed for characterization of microscopic structures in industrial and clinical applications. A custom micro-electromechanical system (MEMS)-based 2D scanner system was developed to achieve 55 kHz A-scan acquisition in a Gabor-domain optical coherence microscopy (GD-OCM) instrument with a novel multilevel GPU architecture for high-speed imaging. GD-OCM yields high-definition volumetric imaging with dynamic depth of focusing through a bio-inspired liquid lens-based microscope design, which has no moving parts and is suitable for use in a manufacturing setting or in a medical environment. A dual-axis MEMS mirror was chosen to replace two single-axis galvanometer mirrors; as a result, the astigmatism caused by the mismatch between the optical pupil and the scanning location was eliminated and a 12x reduction in volume of the scanning system was achieved. Imaging at an invariant resolution of 2 μm was demonstrated throughout a volume of 1 × 1 × 0.6 mm3, acquired in less than 2 minutes. The MEMS-based scanner resulted in improved image quality, increased robustness and lighter weight of the system - all factors that are critical for on-field deployment. A custom integrated feedback system consisting of a laser diode and a position-sensing detector was developed to investigate the impact of the resonant frequency of the MEMS and the driving signal of the scanner on the movement of the mirror. Results on the metrology of manufactured materials and characterization of tissue samples with GD-OCM are presented.

  14. Intraoperative handheld probe for 3D imaging of pediatric benign vocal fold lesions using optical coherence tomography (Conference Presentation)

    NASA Astrophysics Data System (ADS)

    Benboujja, Fouzi; Garcia, Jordan; Beaudette, Kathy; Strupler, Mathias; Hartnick, Christopher J.; Boudoux, Caroline

    2016-02-01

    Excessive and repetitive force applied on vocal fold tissue can induce benign vocal fold lesions. Children affected suffer from chronic hoarseness. In this instance, the vibratory ability of the folds, a complex layered microanatomy, becomes impaired. Histological findings have shown that lesions produce a remodeling of sup-epithelial vocal fold layers. However, our understanding of lesion features and development is still limited. Indeed, conventional imaging techniques do not allow a non-invasive assessment of sub-epithelial integrity of the vocal fold. Furthermore, it remains challenging to differentiate these sub-epithelial lesions (such as bilateral nodules, polyps and cysts) from a clinical perspective, as their outer surfaces are relatively similar. As treatment strategy differs for each lesion type, it is critical to efficiently differentiate sub-epithelial alterations involved in benign lesions. In this study, we developed an optical coherence tomography (OCT) based handheld probe suitable for pediatric laryngological imaging. The probe allows for rapid three-dimensional imaging of vocal fold lesions. The system is adapted to allow for high-resolution intra-operative imaging. We imaged 20 patients undergoing direct laryngoscopy during which we looked at different benign pediatric pathologies such as bilateral nodules, cysts and laryngeal papillomatosis and compared them to healthy tissue. We qualitatively and quantitatively characterized laryngeal pathologies and demonstrated the added advantage of using 3D OCT imaging for lesion discrimination and margin assessment. OCT evaluation of the integrity of the vocal cord could yield to a better pediatric management of laryngeal diseases.

  15. Compact Optical Fiber 3D Shape Sensor Based on a Pair of Orthogonal Tilted Fiber Bragg Gratings.

    PubMed

    Feng, Dingyi; Zhou, Wenjun; Qiao, Xueguang; Albert, Jacques

    2015-01-01

    In this work, a compact fiber-optic 3D shape sensor consisting of two serially connected 2° tilted fiber Bragg gratings (TFBGs) is proposed, where the orientations of the grating planes of the two TFBGs are orthogonal. The measurement of the reflective transmission spectrum from the pair of TFBGs was implemented by Fresnel reflection of the cleaved fiber end. The two groups of cladding mode resonances in the reflection spectrum respond differentially to bending, which allows for the unique determination of the magnitude and orientation of the bend plane (i.e. with a ± 180 degree uncertainty). Bending responses ranging from -0.33 to + 0.21 dB/m(-1) (depending on orientation) are experimentally demonstrated with bending from 0 to 3.03 m(-1). In the third (axial) direction, the strain is obtained directly by the shift of the TFBG Bragg wavelengths with a sensitivity of 1.06 pm/με. PMID:26617191

  16. Compact Optical Fiber 3D Shape Sensor Based on a Pair of Orthogonal Tilted Fiber Bragg Gratings

    PubMed Central

    Feng, Dingyi; Zhou, Wenjun; Qiao, Xueguang; Albert, Jacques

    2015-01-01

    In this work, a compact fiber-optic 3D shape sensor consisting of two serially connected 2° tilted fiber Bragg gratings (TFBGs) is proposed, where the orientations of the grating planes of the two TFBGs are orthogonal. The measurement of the reflective transmission spectrum from the pair of TFBGs was implemented by Fresnel reflection of the cleaved fiber end. The two groups of cladding mode resonances in the reflection spectrum respond differentially to bending, which allows for the unique determination of the magnitude and orientation of the bend plane (i.e. with a ± 180 degree uncertainty). Bending responses ranging from −0.33 to + 0.21 dB/m−1 (depending on orientation) are experimentally demonstrated with bending from 0 to 3.03 m−1. In the third (axial) direction, the strain is obtained directly by the shift of the TFBG Bragg wavelengths with a sensitivity of 1.06 pm/με. PMID:26617191

  17. Analyzing the Evolution of Membrane Fouling via a Novel Method Based on 3D Optical Coherence Tomography Imaging.

    PubMed

    Li, Weiyi; Liu, Xin; Wang, Yi-Ning; Chong, Tzyy Haur; Tang, Chuyang Y; Fane, Anthony G

    2016-07-01

    The development of novel tools for studying the fouling behavior during membrane processes is critical. This work explored optical coherence tomography (OCT) to quantitatively interpret the formation of a cake layer during a membrane process; the quantitative analysis was based on a novel image processing method that was able to precisely resolve the 3D structure of the cake layer on a micrometer scale. Fouling experiments were carried out with foulants having different physicochemical characteristics (silica nanoparticles and bentonite particles). The cake layers formed at a series of times were digitalized using the OCT-based characterization. The specific deposit (cake volume/membrane surface area) and surface coverage were evaluated as a function of time, which for the first time provided direct experimental evidence for the transition of various fouling mechanisms. Axial stripes were observed in the grayscale plots showing the deposit distribution in the scanned area; this interesting observation was in agreement with the instability analysis that correlated the polarized particle groups with the small disturbances in the boundary layer. This work confirms that the OCT-based characterization is able to provide deep insights into membrane fouling processes and offers a powerful tool for exploring membrane processes with enhanced performance.

  18. Cooling fermions in optical lattices by faster entropy redistribution

    NASA Astrophysics Data System (ADS)

    Teles, Rafael P.; Yang, Tsung-Lin; Paiva, Thereza; Scalettar, Richard T.; Natu, Stefan S.; Hulet, Randall G.; Hazzard, Kaden R. A.

    2016-05-01

    Lower entropy for fermions in optical lattices would unlock new quantum phases, including antiferromagnetism and potentially superconductivity. We propose a method to cool these systems at temperatures where conventional methods fail: slowly turning on a tightly focused optical potential transports entropy from the Mott insulator to a metallic entropy reservoir formed along the beam. Our scheme places the entropy reservoir close to the targeted cooling region, which allows entropy redistribution to be effective at lower temperatures than in prior proposals. Furthermore we require only a straightforwardly-applied Gaussian potential. We compute the temperatures achieved with this scheme using an analytic T >> t approximation and, for low T, determinantal quantum Monte Carlo. We optimize the waist and depth of the focused beam, and we find that repulsive potentials cool better than attractive ones. We estimate that the time required for entropy transport under nearly adiabatic conditions at these low temperatures is compatible with the system lifetime. Finally, we explore further improvements to cooling enabled by sophisticated potential engineering, e.g. using a spatial light modulator. Work supported by CNPq.

  19. Development of a strontium optical lattice clock for space applications

    NASA Astrophysics Data System (ADS)

    Singh, Yeshpal

    2016-07-01

    With timekeeping being of paramount importance for modern life, much research and major scientific advances have been undertaken in the field of frequency metrology, particularly over the last few years. New Nobel-prize winning technologies have enabled a new era of atomic clocks; namely the optical clock. These have been shown to perform significantly better than the best microwave clocks reaching an inaccuracy of 1.6x10-18 [1]. With such results being found in large lab based apparatus, the focus now has shifted to portability - to enable the accuracy of various ground based clocks to be measured, and compact autonomous performance - to enable such technologies to be tested in space. This could lead to a master clock in space, improving not only the accuracy of technologies on which modern life has come to require such as GPS and communication networks. But also more fundamentally, this could lead to the redefinition of the second and tests of fundamental physics including applications in the fields of ground based and satellite geodesy, metrology, positioning, navigation, transport and logistics etc. Within the European collaboration, Space Optical Clocks (SOC2) [2-3] consisting of various institutes and industry partners across Europe we have tried to tackle this problem of miniaturisation whilst maintaining stability, accuracy (5x10-17) and robustness whilst keeping power consumption to a minimum - necessary for space applications. We will present the most recent results of the Sr optical clock in SOC2 and also the novel compact design features, new methods employed and outlook. References [1] B. J. Bloom, T. L. Nicholson, J. R. Williams, S. L. Campbell, M. Bishof, X. Zhang, W. Zhang, S. L. Bromley, and J. Ye, "An optical lattice clock with accuracy and stability at the 10-18 level," Nature 506, 71-75 (2014). [2] S. Schiller et al. "Towards Neutral-atom Space Optical Clocks (SOC2): Development of high-performance transportable and breadboard optical clocks and

  20. Issues involved in the quantitative 3D imaging of proton doses using optical CT and chemical dosimeters.

    PubMed

    Doran, Simon; Gorjiara, Tina; Kacperek, Andrzej; Adamovics, John; Kuncic, Zdenka; Baldock, Clive

    2015-01-21

    Dosimetry of proton beams using 3D imaging of chemical dosimeters is complicated by a variation with proton linear energy transfer (LET) of the dose-response (the so-called 'quenching effect'). Simple theoretical arguments lead to the conclusion that the total absorbed dose from multiple irradiations with different LETs cannot be uniquely determined from post-irradiation imaging measurements on the dosimeter. Thus, a direct inversion of the imaging data is not possible and the proposition is made to use a forward model based on appropriate output from a planning system to predict the 3D response of the dosimeter. In addition to the quenching effect, it is well known that chemical dosimeters have a non-linear response at high doses. To the best of our knowledge it has not yet been determined how this phenomenon is affected by LET. The implications for dosimetry of a number of potential scenarios are examined.Dosimeter response as a function of depth (and hence LET) was measured for four samples of the radiochromic plastic PRESAGE(®), using an optical computed tomography readout and entrance doses of 2.0 Gy, 4.0 Gy, 7.8 Gy and 14.7 Gy, respectively. The dosimeter response was separated into two components, a single-exponential low-LET response and a LET-dependent quenching. For the particular formulation of PRESAGE(®) used, deviations from linearity of the dosimeter response became significant for doses above approximately 16 Gy. In a second experiment, three samples were each irradiated with two separate beams of 4 Gy in various different configurations. On the basis of the previous characterizations, two different models were tested for the calculation of the combined quenching effect from two contributions with different LETs. It was concluded that a linear superposition model with separate calculation of the quenching for each irradiation did not match the measured result where two beams overlapped. A second model, which used the concept of an